Your job contains 1 sequence.
>038122
TEEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQREGNVQARLRKLNEGVIQATLSALA
GLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCER
AFLGTLDGSC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038122
(130 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150758 - symbol:HEMC "hydroxymethylbilane syn... 331 4.1e-45 2
TIGR_CMR|SPO_3649 - symbol:SPO_3649 "porphobilinogen deam... 228 5.1e-19 1
TIGR_CMR|CHY_1208 - symbol:CHY_1208 "porphobilinogen deam... 157 8.5e-18 2
DICTYBASE|DDB_G0284697 - symbol:hemC "porphobilinogen dea... 143 1.7e-16 2
UNIPROTKB|P64336 - symbol:hemC "Porphobilinogen deaminase... 164 2.4e-16 2
UNIPROTKB|E2RTD6 - symbol:HMBS "Uncharacterized protein" ... 152 9.7e-16 2
RGD|2801 - symbol:Hmbs "hydroxymethylbilane synthase" spe... 147 1.7e-15 2
UNIPROTKB|P08397 - symbol:HMBS "Porphobilinogen deaminase... 147 3.5e-15 2
UNIPROTKB|Q5M893 - symbol:Hmbs "Hydroxymethylbilane synth... 144 3.6e-15 2
UNIPROTKB|Q2KIN5 - symbol:HMBS "Porphobilinogen deaminase... 145 5.8e-15 2
UNIPROTKB|F1NKN8 - symbol:HMBS "Uncharacterized protein" ... 142 1.1e-14 2
MGI|MGI:96112 - symbol:Hmbs "hydroxymethylbilane synthase... 137 2.2e-14 2
UNIPROTKB|P06983 - symbol:hemC species:83333 "Escherichia... 180 1.3e-13 1
POMBASE|SPAC24B11.13 - symbol:hem3 "hydroxymethylbilane s... 139 1.3e-13 2
TIGR_CMR|NSE_0385 - symbol:NSE_0385 "putative porphobilin... 103 7.0e-13 2
SGD|S000002364 - symbol:HEM3 "Porphobilinogen deaminase" ... 137 1.3e-12 2
CGD|CAL0000854 - symbol:HEM3 species:5476 "Candida albica... 114 9.4e-12 2
UNIPROTKB|O94048 - symbol:HEM3 "Porphobilinogen deaminase... 114 9.4e-12 2
UNIPROTKB|G4N2C1 - symbol:MGG_04860 "Porphobilinogen deam... 105 3.5e-11 2
TIGR_CMR|ECH_0701 - symbol:ECH_0701 "porphobilinogen deam... 154 9.4e-11 1
TIGR_CMR|CJE_0649 - symbol:CJE_0649 "porphobilinogen deam... 153 1.3e-10 1
UNIPROTKB|F5H345 - symbol:HMBS "Porphobilinogen deaminase... 101 2.9e-10 2
ZFIN|ZDB-GENE-040426-1375 - symbol:hmbsa "hydroxymethylbi... 151 3.4e-10 1
UNIPROTKB|F6Q2D2 - symbol:HMBS "Uncharacterized protein" ... 101 3.7e-10 2
TIGR_CMR|BA_4696 - symbol:BA_4696 "porphobilinogen deamin... 149 3.8e-10 1
ZFIN|ZDB-GENE-050522-491 - symbol:hmbsb "hydroxymethylbil... 149 5.7e-10 1
TIGR_CMR|APH_0746 - symbol:APH_0746 "porphobilinogen deam... 142 2.2e-09 1
ASPGD|ASPL0000052688 - symbol:hemC species:162425 "Emeric... 141 3.9e-09 1
FB|FBgn0010786 - symbol:l(3)02640 "lethal (3) 02640" spec... 139 1.9e-08 1
UNIPROTKB|G3V1P4 - symbol:HMBS "Hydroxymethylbilane synth... 71 0.00055 2
GENEDB_PFALCIPARUM|PFL0480w - symbol:PFL0480w "porphobili... 95 0.00058 1
UNIPROTKB|Q8I5V3 - symbol:PBGD "Porphobilinogen deaminase... 95 0.00058 1
UNIPROTKB|G5EA58 - symbol:HMBS "Porphobilinogen deaminase... 71 0.00064 2
>TAIR|locus:2150758 [details] [associations]
symbol:HEMC "hydroxymethylbilane synthase" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0018160 "peptidyl-pyrromethane cofactor linkage" evidence=IEA]
[GO:0033014 "tetrapyrrole biosynthetic process" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=IEP;RCA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0009073 "aromatic amino
acid family biosynthetic process" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;TAS] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IDA;IMP] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=TAS] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 UniPathway:UPA00251 UniPathway:UPA00668
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0048046
GO:GO:0042742 GO:GO:0009941 GO:GO:0006782 GO:GO:0015995
EMBL:AL392174 EMBL:X73839 EMBL:X73535 EMBL:AF419614 EMBL:AY070431
EMBL:AY123037 IPI:IPI00532138 PIR:S50762 RefSeq:NP_196445.1
UniGene:At.48996 UniGene:At.5343 ProteinModelPortal:Q43316
SMR:Q43316 STRING:Q43316 PaxDb:Q43316 PRIDE:Q43316 ProMEX:Q43316
EnsemblPlants:AT5G08280.1 GeneID:830724 KEGG:ath:AT5G08280
TAIR:At5g08280 eggNOG:COG0181 HOGENOM:HOG000228588
InParanoid:Q43316 KO:K01749 OMA:NGSCDTP PhylomeDB:Q43316
ProtClustDB:PLN02691 BioCyc:ARA:AT5G08280-MONOMER
BioCyc:MetaCyc:AT5G08280-MONOMER Genevestigator:Q43316
GermOnline:AT5G08280 GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212 Uniprot:Q43316
Length = 382
Score = 331 (121.6 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 68/93 (73%), Positives = 76/93 (81%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GNVQ RL KL G +QATL ALAGLK L+MTENV +IL +D+ML AVAQGAIGIAC ++D
Sbjct: 224 GNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIACRTDD 283
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
KMA YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 284 DKMATYLASLNHEETRLAISCERAFLETLDGSC 316
Score = 160 (61.4 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 31/36 (86%), Positives = 33/36 (91%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE 37
+EALING IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 140 DEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPRE 175
>TIGR_CMR|SPO_3649 [details] [associations]
symbol:SPO_3649 "porphobilinogen deaminase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
UniPathway:UPA00668 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006782 GO:GO:0015995 HOGENOM:HOG000228588 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072
RefSeq:YP_168844.1 ProteinModelPortal:Q5LMB4 GeneID:3195060
KEGG:sil:SPO3649 PATRIC:23380781 Uniprot:Q5LMB4
Length = 319
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 48/93 (51%), Positives = 62/93 (66%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GNVQ RLRKL+EGV + T A+AG++ LNM E + DDML A+AQGAIGI +D
Sbjct: 162 GNVQTRLRKLSEGVAECTFLAMAGIRRLNMAEVPATAISPDDMLPAIAQGAIGIERRMDD 221
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A+ L +++H ET Q + ERA L LDGSC
Sbjct: 222 TRAAEMLTAIHHGETGQRLAAERALLAALDGSC 254
>TIGR_CMR|CHY_1208 [details] [associations]
symbol:CHY_1208 "porphobilinogen deaminase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
ProtClustDB:PRK00072 HSSP:P06983 RefSeq:YP_360051.1
ProteinModelPortal:Q3ACT3 STRING:Q3ACT3 GeneID:3727551
KEGG:chy:CHY_1208 PATRIC:21275552
BioCyc:CHYD246194:GJCN-1207-MONOMER Uniprot:Q3ACT3
Length = 311
Score = 157 (60.3 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GN+ R RK+ E + + A AG+K L + +T +L D L AV QG+IG+ ++D
Sbjct: 149 GNLPTRFRKMEEMDLDGIILAYAGVKRLGYEDKITEMLSFDLCLPAVGQGSIGVEIRADD 208
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L ++H T +A+ ERAFL L+G C
Sbjct: 209 TFIEELLKPIDHFATNRAIRAERAFLKRLEGGC 241
Score = 82 (33.9 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE 37
E AL+N ID+AVHSMKD+PT L + + +RE
Sbjct: 66 EHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCERE 101
>DICTYBASE|DDB_G0284697 [details] [associations]
symbol:hemC "porphobilinogen deaminase" species:44689
"Dictyostelium discoideum" [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA;ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006783 "heme biosynthetic process"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0006779 "porphyrin-containing compound biosynthetic process"
evidence=IEA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 dictyBase:DDB_G0284697
GenomeReviews:CM000153_GR GO:GO:0006783 GO:GO:0006782
EMBL:AAFI02000070 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HSSP:P06983 RefSeq:XP_638482.1
ProteinModelPortal:Q54P93 STRING:Q54P93 EnsemblProtists:DDB0231417
GeneID:8624733 KEGG:ddi:DDB_G0284697 OMA:QPLRGNV
ProtClustDB:CLSZ2430242 Uniprot:Q54P93
Length = 325
Score = 143 (55.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 38 GNVQARLRKLNEGV--IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTS 95
GN+ R +KL + + A+AGL+ + +T++++ I+P L AV QG++GI C
Sbjct: 159 GNLNTRFKKLEDDSNGYDGMILAVAGLERMELTDHISEIIPDSISLYAVGQGSLGIECKD 218
Query: 96 NDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D + L L H E+ ER+ L L+G C
Sbjct: 219 GDDFIQSILNPLIHRESMYCCEAERSMLRDLEGGC 253
Score = 86 (35.3 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD 26
E+ ++NG ID+AVHS+KD+PT L D
Sbjct: 71 EDMMLNGTIDLAVHSLKDIPTKLPD 95
>UNIPROTKB|P64336 [details] [associations]
symbol:hemC "Porphobilinogen deaminase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842573 GO:GO:0006782
eggNOG:COG0181 HOGENOM:HOG000228588 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072 PIR:A70747
RefSeq:NP_215024.1 RefSeq:NP_334940.1 RefSeq:YP_006513843.1
ProteinModelPortal:P64336 SMR:P64336 PRIDE:P64336
EnsemblBacteria:EBMYCT00000000916 EnsemblBacteria:EBMYCT00000072383
GeneID:13318384 GeneID:887306 GeneID:924164 KEGG:mtc:MT0531
KEGG:mtu:Rv0510 KEGG:mtv:RVBD_0510 PATRIC:18122878
TubercuList:Rv0510 Uniprot:P64336
Length = 309
Score = 164 (62.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GN+ RL K++ G + A + A AGL L ++VT L ML A AQGA+ + C + D
Sbjct: 142 GNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGD 201
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ L L+ +TR AV ERA L L+ C
Sbjct: 202 SRLVAVLAELDDADTRAAVTAERALLADLEAGC 234
Score = 60 (26.2 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 3 EALINGEIDIAVHSMKDVPT 22
EA+ G +D AVHS KD+PT
Sbjct: 60 EAMEAGLVDAAVHSYKDLPT 79
>UNIPROTKB|E2RTD6 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GeneTree:ENSGT00390000009083
GO:GO:0033014 EMBL:AAEX03003441 Ensembl:ENSCAFT00000019616
Uniprot:E2RTD6
Length = 362
Score = 152 (58.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 36/94 (38%), Positives = 52/94 (55%)
Query: 38 GNVQARLRKLNE-GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A AGL+ + V IL ++ + AV QGA+G+ +
Sbjct: 169 GNLNTRLRKLDELQEFSAIILAAAGLQRMGWQHRVGQILHPEECMYAVGQGALGVEVRAK 228
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ M +G L+ ET + ERAFL L+G C
Sbjct: 229 DQDMLDLVGVLHDPETLLRCIAERAFLRHLEGGC 262
Score = 71 (30.1 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 82 EHALEKNEVDLVVHSLKDLPTVL 104
>RGD|2801 [details] [associations]
symbol:Hmbs "hydroxymethylbilane synthase" species:10116 "Rattus
norvegicus" [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=ISO;IMP;IDA] [GO:0004852 "uroporphyrinogen-III synthase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0010038 "response to metal ion" evidence=IEP]
[GO:0010043 "response to zinc ion" evidence=IEP] [GO:0010288
"response to lead ion" evidence=IEP] [GO:0014070 "response to organic
cyclic compound" evidence=IEP] [GO:0018160 "peptidyl-pyrromethane
cofactor linkage" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0031406
"carboxylic acid binding" evidence=IPI] [GO:0031667 "response to
nutrient levels" evidence=IEP] [GO:0032025 "response to cobalt ion"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IMP;IDA] [GO:0033273 "response to vitamin" evidence=IEP]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043176 "amine
binding" evidence=IPI] [GO:0043200 "response to amino acid stimulus"
evidence=IEP] [GO:0048708 "astrocyte differentiation" evidence=IEP]
[GO:0050662 "coenzyme binding" evidence=IPI] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0071236 "cellular response to
antibiotic" evidence=IEP] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IEP] [GO:0071284 "cellular
response to lead ion" evidence=IEP] [GO:0071345 "cellular response to
cytokine stimulus" evidence=IEP] [GO:0071418 "cellular response to
amine stimulus" evidence=IEP] [GO:0071549 "cellular response to
dexamethasone stimulus" evidence=IEP] [GO:0000793 "condensed
chromosome" evidence=IDA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
RGD:2801 GO:GO:0005634 GO:GO:0005737 GO:GO:0071236 GO:GO:0071549
GO:GO:0042493 GO:GO:0032355 GO:GO:0010043 GO:GO:0050662 GO:GO:0031100
GO:GO:0030424 GO:GO:0031406 GO:GO:0001666 GO:GO:0009743 GO:GO:0043176
GO:GO:0043200 GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587
HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF GO:GO:0004852 GO:GO:0048708
GO:GO:0033273 EMBL:X06827 EMBL:Y12006 IPI:IPI00194345 IPI:IPI00551682
PIR:JE0285 UniGene:Rn.11080 ProteinModelPortal:P19356 STRING:P19356
PRIDE:P19356 UCSC:RGD:2801 InParanoid:P19356 SABIO-RK:P19356
ArrayExpress:P19356 Genevestigator:P19356
GermOnline:ENSRNOG00000010390 GO:GO:0033014 Uniprot:P19356
Length = 361
Score = 147 (56.8 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E + A + A+AGL+ + V IL ++ + AV QGA+ + +
Sbjct: 168 GNLNTRLRKLDEQLEFSAIILAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAK 227
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + +G L+ ET + ERAFL L+G C
Sbjct: 228 DQDILDLVGVLHDPETLLRCIAERAFLRHLEGGC 261
Score = 74 (31.1 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KDVPT L
Sbjct: 82 ENALEKNEVDLVVHSLKDVPTIL 104
>UNIPROTKB|P08397 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IDA] [GO:0006783 "heme biosynthetic process"
evidence=IC;TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006778
"porphyrin-containing compound metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0005829 GO:GO:0005634 EMBL:CH471065
GO:GO:0044281 GO:GO:0071236 GO:GO:0071549 GO:GO:0042493
GO:GO:0032355 GO:GO:0010043 GO:GO:0050662 GO:GO:0031100
GO:GO:0030424 GO:GO:0031406 GO:GO:0001666 GO:GO:0009743
GO:GO:0006783 GO:GO:0000793 GO:GO:0043176 GO:GO:0043200
GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
CTD:3145 HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF EMBL:X04217
EMBL:X04808 EMBL:M95623 EMBL:AK290275 EMBL:BC000520 EMBL:BC008149
EMBL:BC019323 EMBL:X68018 EMBL:S60381 IPI:IPI00028160
IPI:IPI00219877 PIR:A45012 RefSeq:NP_000181.2 RefSeq:NP_001019553.1
UniGene:Hs.82609 PDB:3ECR PDB:3EQ1 PDBsum:3ECR PDBsum:3EQ1
ProteinModelPortal:P08397 SMR:P08397 STRING:P08397
PhosphoSite:P08397 DMDM:1170217 PaxDb:P08397 PRIDE:P08397
DNASU:3145 Ensembl:ENST00000278715 Ensembl:ENST00000392841
Ensembl:ENST00000442944 Ensembl:ENST00000537841
Ensembl:ENST00000570821 Ensembl:ENST00000571563
Ensembl:ENST00000574152 Ensembl:ENST00000575587 GeneID:3145
KEGG:hsa:3145 UCSC:uc001puz.1 GeneCards:GC11P118955 HGNC:HGNC:4982
HPA:HPA006114 MIM:176000 MIM:609806 neXtProt:NX_P08397
Orphanet:79276 PharmGKB:PA29317 InParanoid:P08397 PhylomeDB:P08397
BRENDA:2.5.1.61 EvolutionaryTrace:P08397 GenomeRNAi:3145
NextBio:12464 ArrayExpress:P08397 Bgee:P08397 CleanEx:HS_HMBS
Genevestigator:P08397 GermOnline:ENSG00000149397 GO:GO:0004852
GO:GO:0048708 GO:GO:0033273 Uniprot:P08397
Length = 361
Score = 147 (56.8 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 35/94 (37%), Positives = 52/94 (55%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A AGL+ + V IL ++ + AV QGA+G+ +
Sbjct: 168 GNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAK 227
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + +G L+ ET + ERAFL L+G C
Sbjct: 228 DQDILDLVGVLHDPETLLRCIAERAFLRHLEGGC 261
Score = 71 (30.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 82 EHALEKNEVDLVVHSLKDLPTVL 104
>UNIPROTKB|Q5M893 [details] [associations]
symbol:Hmbs "Hydroxymethylbilane synthase" species:10116
"Rattus norvegicus" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 RGD:2801 GO:GO:0006779 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF CTD:3145
GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967 IPI:IPI00551682
UniGene:Rn.11080 EMBL:BC088162 RefSeq:NP_037300.2 STRING:Q5M893
Ensembl:ENSRNOT00000014127 GeneID:25709 KEGG:rno:25709
InParanoid:Q5M893 NextBio:607767 Genevestigator:Q5M893
Uniprot:Q5M893
Length = 361
Score = 144 (55.7 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 38 GNVQARLRKLNE-GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A+AGL+ + V IL ++ + AV QGA+ + +
Sbjct: 168 GNLNTRLRKLDELQEFSAIILAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAK 227
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + +G L+ ET + ERAFL L+G C
Sbjct: 228 DQDILDLVGVLHDPETLLRCIAERAFLRHLEGGC 261
Score = 74 (31.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KDVPT L
Sbjct: 82 ENALEKNEVDLVVHSLKDVPTIL 104
>UNIPROTKB|Q2KIN5 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9913 "Bos
taurus" [GO:0006782 "protoporphyrinogen IX biosynthetic process"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
EMBL:BC112573 IPI:IPI00690248 RefSeq:NP_001039672.1
UniGene:Bt.21218 ProteinModelPortal:Q2KIN5 STRING:Q2KIN5
Ensembl:ENSBTAT00000007052 GeneID:515614 KEGG:bta:515614 CTD:3145
GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967 InParanoid:Q2KIN5
OrthoDB:EOG4QJRNF NextBio:20871921 Uniprot:Q2KIN5
Length = 361
Score = 145 (56.1 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 38 GNVQARLRKLNE-GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A AGL+ + V IL ++ + AV QGA+G+ +
Sbjct: 168 GNLNTRLRKLDELQEFSAIILATAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRAK 227
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + +G L+ ET + ER+FL L+G C
Sbjct: 228 DQDILDLVGVLHDPETLLRCIAERSFLRHLEGGC 261
Score = 71 (30.1 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 82 EHALERNEVDLVVHSLKDLPTVL 104
>UNIPROTKB|F1NKN8 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GeneTree:ENSGT00390000009083
GO:GO:0033014 EMBL:AADN02042074 IPI:IPI00592719
Ensembl:ENSGALT00000000380 Uniprot:F1NKN8
Length = 349
Score = 142 (55.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RL+KL+E A + A AGLK + + +L +D L AV QGA+ + +
Sbjct: 156 GNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAK 215
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D++ + +L ET + ERAF+ L+G C
Sbjct: 216 DQETLNMVSALQDGETVLCCIAERAFMKRLEGGC 249
Score = 71 (30.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQREGNVQA 42
E AL E+D+ VHS+KD+PT L + +RE + A
Sbjct: 70 ENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDA 110
>MGI|MGI:96112 [details] [associations]
symbol:Hmbs "hydroxymethylbilane synthase" species:10090 "Mus
musculus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0004418 "hydroxymethylbilane synthase activity" evidence=ISO]
[GO:0004852 "uroporphyrinogen-III synthase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=IEA] [GO:0006783 "heme biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0031406
"carboxylic acid binding" evidence=ISO] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=ISO] [GO:0043176 "amine binding"
evidence=ISO] [GO:0050662 "coenzyme binding" evidence=ISO]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 MGI:MGI:96112
GO:GO:0005634 GO:GO:0005737 GO:GO:0071236 GO:GO:0071549
GO:GO:0042493 GO:GO:0032355 GO:GO:0010043 GO:GO:0050662
GO:GO:0031100 GO:GO:0030424 GO:GO:0031406 GO:GO:0001666
GO:GO:0009743 GO:GO:0000793 GO:GO:0043176 GO:GO:0043200
GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
CTD:3145 GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967
OrthoDB:EOG4QJRNF GO:GO:0004852 GO:GO:0048708 GO:GO:0033273
EMBL:M28666 EMBL:M28663 EMBL:M28664 EMBL:M28665 EMBL:AK166734
EMBL:AK167702 IPI:IPI00133589 IPI:IPI00230382 PIR:A36513
RefSeq:NP_038579.2 UniGene:Mm.247676 ProteinModelPortal:P22907
SMR:P22907 STRING:P22907 PaxDb:P22907 PRIDE:P22907
Ensembl:ENSMUST00000077353 Ensembl:ENSMUST00000097558 GeneID:15288
KEGG:mmu:15288 InParanoid:Q3TIV0 NextBio:287927 Bgee:P22907
CleanEx:MM_HMBS Genevestigator:P22907 GermOnline:ENSMUSG00000032126
Uniprot:P22907
Length = 361
Score = 137 (53.3 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 33/94 (35%), Positives = 51/94 (54%)
Query: 38 GNVQARLRKLNE-GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A+AGL+ + V IL ++ + AV QGA+ + +
Sbjct: 168 GNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAK 227
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + + L+ ET + ERAFL L+G C
Sbjct: 228 DQDILDLVSVLHDPETLLRCIAERAFLRHLEGGC 261
Score = 74 (31.1 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KDVPT L
Sbjct: 82 ENALEKNEVDLVVHSLKDVPTIL 104
>UNIPROTKB|P06983 [details] [associations]
symbol:hemC species:83333 "Escherichia coli K-12"
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA;IMP] [GO:0006783 "heme biosynthetic process"
evidence=IMP] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IMP] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006782
"protoporphyrinogen IX biosynthetic process" evidence=IEA]
HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006783
EMBL:M87049 GO:GO:0006782 EMBL:X66782 eggNOG:COG0181
HOGENOM:HOG000228588 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072 EMBL:X04242
EMBL:X12614 PIR:F65184 RefSeq:YP_026260.1 RefSeq:YP_491637.1
PDB:1AH5 PDB:1GTK PDB:1PDA PDB:1YPN PDB:2YPN PDBsum:1AH5
PDBsum:1GTK PDBsum:1PDA PDBsum:1YPN PDBsum:2YPN
ProteinModelPortal:P06983 SMR:P06983 DIP:DIP-9879N IntAct:P06983
MINT:MINT-1302039 PRIDE:P06983 EnsemblBacteria:EBESCT00000000652
EnsemblBacteria:EBESCT00000014936 GeneID:12930663 GeneID:947759
KEGG:ecj:Y75_p3373 KEGG:eco:b3805 PATRIC:32123109 EchoBASE:EB0424
EcoGene:EG10429 BioCyc:EcoCyc:OHMETHYLBILANESYN-MONOMER
BioCyc:ECOL316407:JW5932-MONOMER
BioCyc:MetaCyc:OHMETHYLBILANESYN-MONOMER EvolutionaryTrace:P06983
Genevestigator:P06983 Uniprot:P06983
Length = 313
Score = 180 (68.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/93 (43%), Positives = 52/93 (55%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GNV RL KL+ G A + A+AGLK L + + LP + L AV QGA+GI C +D
Sbjct: 150 GNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDD 209
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L +LNH ET V ERA L+G C
Sbjct: 210 SRTRELLAALNHHETALRVTAERAMNTRLEGGC 242
>POMBASE|SPAC24B11.13 [details] [associations]
symbol:hem3 "hydroxymethylbilane synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS;IDA]
[GO:0006783 "heme biosynthetic process" evidence=ISS] [GO:0018160
"peptidyl-pyrromethane cofactor linkage" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
PomBase:SPAC24B11.13 GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006783 GO:GO:0006782
eggNOG:COG0181 KO:K01749 OMA:NGSCDTP GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 EMBL:D89238 PIR:T39093
RefSeq:NP_001018179.1 ProteinModelPortal:Q09899 STRING:Q09899
PRIDE:Q09899 EnsemblFungi:SPAC24B11.13.1 GeneID:3361383
KEGG:spo:SPAC24B11.13 OrthoDB:EOG4KH644 NextBio:20811433
Uniprot:Q09899
Length = 336
Score = 139 (54.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 33/95 (34%), Positives = 50/95 (52%)
Query: 38 GNVQARLRKLN--EGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTS 95
GNV RL KL+ + + A AGL L + + + +L + AV QGA+ + +
Sbjct: 157 GNVGTRLAKLDAPDSQFDCLVLAAAGLFRLGLKDRIAQMLTAPFVYYAVGQGALAVEVRA 216
Query: 96 NDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+DK+M + L L H+ET A + ERA + L G C
Sbjct: 217 DDKEMIEMLKPLQHQETLYACLAERALMKRLQGGC 251
Score = 63 (27.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC 32
E L+ + I VHS+KD+P+ + D ++ C
Sbjct: 71 EALLVTNQCRILVHSLKDLPSEMPDGMVIAC 101
>TIGR_CMR|NSE_0385 [details] [associations]
symbol:NSE_0385 "putative porphobilinogen deaminase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
RefSeq:YP_506274.1 ProteinModelPortal:Q2GE22 STRING:Q2GE22
GeneID:3931854 KEGG:nse:NSE_0385 PATRIC:22680835
ProtClustDB:CLSK2528160 BioCyc:NSEN222891:GHFU-410-MONOMER
Uniprot:Q2GE22
Length = 286
Score = 103 (41.3 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GN+ R+ K + + A L+ L + ++ ++ + ML VAQGA+ + D
Sbjct: 143 GNIATRIEKAKN--LDGIILAFCALERLGLRRMISEVIHENVMLPGVAQGALCVEFRKKD 200
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + + + +++ ET ERAFL ++G C
Sbjct: 201 RFLRELILNISDRETIICTAAERAFLEEINGDC 233
Score = 92 (37.4 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD 26
EE L+ GEIDIAVHSMKDVP + D
Sbjct: 63 EEKLLTGEIDIAVHSMKDVPAFYHD 87
>SGD|S000002364 [details] [associations]
symbol:HEM3 "Porphobilinogen deaminase" species:4932
"Saccharomyces cerevisiae" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=IEA;IMP] [GO:0006783 "heme biosynthetic
process" evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=IEA] [GO:0006782 "protoporphyrinogen
IX biosynthetic process" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] [GO:0018160
"peptidyl-pyrromethane cofactor linkage" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 SGD:S000002364
GO:GO:0005634 GO:GO:0005737 EMBL:BK006938 EMBL:X99000 GO:GO:0006783
GO:GO:0006782 eggNOG:COG0181 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587
GeneTree:ENSGT00390000009083 OMA:QPLRGNV OrthoDB:EOG4KH644
EMBL:Z11745 EMBL:Z74253 EMBL:AY899249 PIR:S25071 RefSeq:NP_010076.1
ProteinModelPortal:P28789 SMR:P28789 STRING:P28789 PaxDb:P28789
PeptideAtlas:P28789 PRIDE:P28789 EnsemblFungi:YDL205C GeneID:851322
KEGG:sce:YDL205C CYGD:YDL205c NextBio:968366 Genevestigator:P28789
GermOnline:YDL205C Uniprot:P28789
Length = 327
Score = 137 (53.3 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 34/95 (35%), Positives = 47/95 (49%)
Query: 38 GNVQARLRKLNE--GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTS 95
GN+Q RL+KL++ Q + A AGL + + +T D M AV QGA+GI
Sbjct: 157 GNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIRK 216
Query: 96 NDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D KM K L + + ERA + TL+G C
Sbjct: 217 GDTKMMKILDEICDLNATICCLSERALMRTLEGGC 251
Score = 55 (24.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 9 EIDIAVHSMKDVPTYL 24
++D+ VHS+KD+PT L
Sbjct: 78 KLDLIVHSLKDMPTLL 93
>CGD|CAL0000854 [details] [associations]
symbol:HEM3 species:5476 "Candida albicans" [GO:0006783 "heme
biosynthetic process" evidence=ISS;IMP] [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS;IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 CGD:CAL0000854
GO:GO:0009405 GO:GO:0006783 GO:GO:0006782 EMBL:AACQ01000104
EMBL:AACQ01000105 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 EMBL:AL033502 RefSeq:XP_714346.1
RefSeq:XP_714388.1 ProteinModelPortal:O94048 STRING:O94048
GeneID:3643940 GeneID:3643992 KEGG:cal:CaO19.1742
KEGG:cal:CaO19.9309 Uniprot:O94048
Length = 340
Score = 114 (45.2 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 38 GNVQARLRKLNEGVIQ--ATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTS 95
GN+Q RL KL++ + + A AGL L + +T+ L DDM AV QGA+GI
Sbjct: 166 GNIQTRLNKLDQPNNEYCCLILASAGLIRLGLGHRITSYL--DDMYYAVGQGALGIEIRK 223
Query: 96 NDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D + L + + ER+ + L+G C
Sbjct: 224 GDDNIKSILKKIEDPIATICCLAERSLMRYLEGGC 258
Score = 72 (30.4 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 9 EIDIAVHSMKDVPTYLLDKTILPCNLQRE 37
++D+ VHS+KD+PT L ++ L C QRE
Sbjct: 87 KLDLIVHSLKDMPTNLPEEFELGCIFQRE 115
>UNIPROTKB|O94048 [details] [associations]
symbol:HEM3 "Porphobilinogen deaminase" species:237561
"Candida albicans SC5314" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=ISS;IMP] [GO:0006783 "heme biosynthetic process"
evidence=ISS;IMP] [GO:0009405 "pathogenesis" evidence=IMP]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 CGD:CAL0000854
GO:GO:0009405 GO:GO:0006783 GO:GO:0006782 EMBL:AACQ01000104
EMBL:AACQ01000105 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 EMBL:AL033502 RefSeq:XP_714346.1
RefSeq:XP_714388.1 ProteinModelPortal:O94048 STRING:O94048
GeneID:3643940 GeneID:3643992 KEGG:cal:CaO19.1742
KEGG:cal:CaO19.9309 Uniprot:O94048
Length = 340
Score = 114 (45.2 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 38 GNVQARLRKLNEGVIQ--ATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTS 95
GN+Q RL KL++ + + A AGL L + +T+ L DDM AV QGA+GI
Sbjct: 166 GNIQTRLNKLDQPNNEYCCLILASAGLIRLGLGHRITSYL--DDMYYAVGQGALGIEIRK 223
Query: 96 NDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D + L + + ER+ + L+G C
Sbjct: 224 GDDNIKSILKKIEDPIATICCLAERSLMRYLEGGC 258
Score = 72 (30.4 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 9 EIDIAVHSMKDVPTYLLDKTILPCNLQRE 37
++D+ VHS+KD+PT L ++ L C QRE
Sbjct: 87 KLDLIVHSLKDMPTNLPEEFELGCIFQRE 115
>UNIPROTKB|G4N2C1 [details] [associations]
symbol:MGG_04860 "Porphobilinogen deaminase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 EMBL:CM001233
KO:K01749 GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212 GO:GO:0033014
RefSeq:XP_003712340.1 ProteinModelPortal:G4N2C1
EnsemblFungi:MGG_04860T0 GeneID:2675497 KEGG:mgr:MGG_04860
Uniprot:G4N2C1
Length = 340
Score = 105 (42.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 38 GNVQARLRKLN--EGVIQATLSALAGLKCLNMTENVTNILPIDD----MLLAVAQGAIGI 91
GN+ RLRKL+ +G + A AGL ++ + L +L AV QGA+G+
Sbjct: 156 GNIDTRLRKLDAEDGEFDCIILAAAGLHRMDQHSRIAQYLDSTTEGGGVLHAVGQGALGL 215
Query: 92 ACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D + K + L T +A ER + TL+G C
Sbjct: 216 EVRKGDIETLKVIECLVDMPTMKAGWAERTVMRTLEGGC 254
Score = 76 (31.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE 37
E L GE+D VH +KD+PT L D L ++RE
Sbjct: 67 EAMLTTGEVDFIVHCLKDMPTTLPDNCELGAVMERE 102
>TIGR_CMR|ECH_0701 [details] [associations]
symbol:ECH_0701 "porphobilinogen deaminase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
OMA:NGSCDTP GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212
HOGENOM:HOG000228587 ProtClustDB:PRK00072 RefSeq:YP_507506.1
ProteinModelPortal:Q2GGC7 STRING:Q2GGC7 GeneID:3927748
KEGG:ech:ECH_0701 PATRIC:20576850
BioCyc:ECHA205920:GJNR-703-MONOMER Uniprot:Q2GGC7
Length = 298
Score = 154 (59.3 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GN+ R+ K N G + A AGL +N + + IL ML AV QGAIGI C +D
Sbjct: 147 GNIDTRILKANVGEFDGIVLAEAGLIRINRCDVIKEILSPKIMLSAVGQGAIGIQCRVDD 206
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + LN ++ V+ ER+FL T++GSC
Sbjct: 207 HSIINKIKVLNCHQSYVCVMAERSFLKTINGSC 239
Score = 116 (45.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQREGNVQARLRKLNEGVIQATLSALAG 61
EEAL+ G++D+AVHS+KD+P + + I+PC L+R + ++ + L+A G
Sbjct: 64 EEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNATIG 123
Query: 62 LKCLNMTENVTNILPIDDMLLAVAQGAI 89
+ + + P D+ + +G I
Sbjct: 124 TSSVRRKVQLNYLRP--DLQVVPVRGNI 149
>TIGR_CMR|CJE_0649 [details] [associations]
symbol:CJE_0649 "porphobilinogen deaminase" species:195099
"Campylobacter jejuni RM1221" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
ProtClustDB:PRK00072 RefSeq:YP_178664.1 HSSP:P06983
ProteinModelPortal:Q5HVM1 STRING:Q5HVM1 GeneID:3232028
KEGG:cjr:CJE0649 PATRIC:20043018 BioCyc:CJEJ195099:GJC0-664-MONOMER
Uniprot:Q5HVM1
Length = 307
Score = 153 (58.9 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI--DDMLLAVAQGAIGIACTS 95
GNV +R+ KL A + A+AG+K LN+ + V + D+++ A +QGA+GI +
Sbjct: 146 GNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIE-SI 204
Query: 96 NDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ND+K+ + L LN E ER F+ TL+G C
Sbjct: 205 NDEKILELLKCLNDENALIETSIEREFIATLEGGC 239
>UNIPROTKB|F5H345 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 IPI:IPI01012145 ProteinModelPortal:F5H345 SMR:F5H345
Ensembl:ENST00000543090 ArrayExpress:F5H345 Bgee:F5H345
Uniprot:F5H345
Length = 330
Score = 101 (40.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 31/94 (32%), Positives = 45/94 (47%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A AGL+ + V QGA+G+ +
Sbjct: 150 GNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRV-------------GQGALGVEVRAK 196
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + +G L+ ET + ERAFL L+G C
Sbjct: 197 DQDILDLVGVLHDPETLLRCIAERAFLRHLEGGC 230
Score = 71 (30.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 64 EHALEKNEVDLVVHSLKDLPTVL 86
>ZFIN|ZDB-GENE-040426-1375 [details] [associations]
symbol:hmbsa "hydroxymethylbilane synthase a"
species:7955 "Danio rerio" [GO:0018160 "peptidyl-pyrromethane
cofactor linkage" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] [GO:0004418
"hydroxymethylbilane synthase activity" evidence=IEA]
HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
ZFIN:ZDB-GENE-040426-1375 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOVERGEN:HBG000967 HSSP:P06983 GO:GO:0033014
EMBL:BC053268 IPI:IPI00487717 RefSeq:NP_957448.1 UniGene:Dr.79518
ProteinModelPortal:Q7T336 STRING:Q7T336 PRIDE:Q7T336 GeneID:394129
KEGG:dre:394129 CTD:394129 InParanoid:Q7T336 NextBio:20815080
ArrayExpress:Q7T336 Bgee:Q7T336 Uniprot:Q7T336
Length = 358
Score = 151 (58.2 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 38 GNVQARLRKLNE-GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RL+KL+E A + A AGLK + ++ +L +D + AV QGA+ + +
Sbjct: 166 GNLNTRLKKLDEKDDYAAIILAAAGLKRMGWESRISQVLGPEDCMYAVGQGALAVEVRAQ 225
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DK + + + L+H +T + ERAFL L+G C
Sbjct: 226 DKDILEMVSVLHHPDTVLRCISERAFLKQLEGGC 259
>UNIPROTKB|F6Q2D2 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 eggNOG:COG0181 GO:GO:0004418 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212
HOGENOM:HOG000228587 GeneTree:ENSGT00390000009083
HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF GO:GO:0033014 EMBL:CU639481
Ensembl:ENSSSCT00000016474 OMA:GKGAFTK Uniprot:F6Q2D2
Length = 358
Score = 101 (40.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 38 GNVQARLRKLNE-GVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL+E A + A AGL+ + V IL ++ + AV QGA+G+ +
Sbjct: 168 GNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQGALGVEVRA- 226
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ + +G ++ ET + R L L+G C
Sbjct: 227 DQDILDLVG-VHDPETLLRCMLTR-LLRHLEGGC 258
Score = 71 (30.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 82 EHALERNEVDLVVHSLKDLPTVL 104
>TIGR_CMR|BA_4696 [details] [associations]
symbol:BA_4696 "porphobilinogen deaminase" species:198094
"Bacillus anthracis str. Ames" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006782
eggNOG:COG0181 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 RefSeq:NP_846909.1 RefSeq:YP_021344.1
RefSeq:YP_030608.1 ProteinModelPortal:Q81LC7 IntAct:Q81LC7
DNASU:1083703 EnsemblBacteria:EBBACT00000008102
EnsemblBacteria:EBBACT00000015299 EnsemblBacteria:EBBACT00000024052
GeneID:1083703 GeneID:2816117 GeneID:2850412 KEGG:ban:BA_4696
KEGG:bar:GBAA_4696 KEGG:bat:BAS4361 HOGENOM:HOG000228587
OMA:CLAERAF ProtClustDB:PRK00072
BioCyc:BANT260799:GJAJ-4416-MONOMER
BioCyc:BANT261594:GJ7F-4564-MONOMER Uniprot:Q81LC7
Length = 309
Score = 149 (57.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 36/94 (38%), Positives = 49/94 (52%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNM-TENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RLRKL E A + A AGL+ + E +T L + AV QGA+ I C +
Sbjct: 148 GNIDTRLRKLKEEDYDAIILATAGLQRMGWDNEVITEHLDETLCVPAVGQGALAIECRED 207
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DK + + L +N T + V ER FL L+G C
Sbjct: 208 DKDLLQLLAHINDAVTEKTVAAERVFLHKLEGGC 241
>ZFIN|ZDB-GENE-050522-491 [details] [associations]
symbol:hmbsb "hydroxymethylbilane synthase, b"
species:7955 "Danio rerio" [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 InterPro:IPR009081
ZFIN:ZDB-GENE-050522-491 PROSITE:PS50075 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 HOVERGEN:HBG000967
OrthoDB:EOG4QJRNF GO:GO:0033014 EMBL:BC095373 IPI:IPI00833720
RefSeq:NP_001019559.1 UniGene:Dr.78873 ProteinModelPortal:Q503D2
STRING:Q503D2 GeneID:338290 KEGG:dre:338290 CTD:338290
NextBio:20812617 Uniprot:Q503D2
Length = 360
Score = 149 (57.5 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GN+ RL+KL+E A + A AGLK + ++ IL +D + AV QGA+ + +
Sbjct: 165 GNLNTRLKKLDENNDFSAIILAAAGLKRMGWENRISQILGPEDCMYAVGQGALAVEVRAR 224
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D + + + LN +T + + ERAFL L+G C
Sbjct: 225 DLDILEMVSVLNDSDTALSCIAERAFLKHLEGGC 258
>TIGR_CMR|APH_0746 [details] [associations]
symbol:APH_0746 "porphobilinogen deaminase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
UniPathway:UPA00668 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0006782 GO:GO:0015995 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 ProtClustDB:PRK00072
RefSeq:YP_505325.1 ProteinModelPortal:Q2GJX6 STRING:Q2GJX6
GeneID:3930703 KEGG:aph:APH_0746 PATRIC:20950180 OMA:LEREDPH
BioCyc:APHA212042:GHPM-762-MONOMER Uniprot:Q2GJX6
Length = 304
Score = 142 (55.0 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GNV+ R+ K+ G + A AGL ++ ++ +L + ML AV QGAI + C D
Sbjct: 151 GNVETRISKMQMGECDGIVLAEAGLYRVSKDNLISEVLQPEVMLGAVGQGAICVQCRRYD 210
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+++ + L LN ++ V ER+F+ +DGSC
Sbjct: 211 RRILEILKKLNCHKSYTTVSAERSFMRAVDGSC 243
Score = 99 (39.9 bits), Expect = 0.00012, P = 0.00012
Identities = 24/75 (32%), Positives = 36/75 (48%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQREGNVQARLRKLNEGVIQATLSALAG 61
EEAL++ ID+AVHS KDVP + +PC L R + A L + + L+A G
Sbjct: 68 EEALLDNIIDVAVHSAKDVPGIYSEDLDIPCILPRASALDAFLSSKYDSIASLPLNAKIG 127
Query: 62 LKCLNMTENVTNILP 76
+ + + P
Sbjct: 128 TSSVRRKVQLLTMRP 142
>ASPGD|ASPL0000052688 [details] [associations]
symbol:hemC species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0006783 "heme biosynthetic process" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 EMBL:BN001308 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GO:GO:0033014
EnsemblFungi:CADANIAT00002626 Uniprot:C8VQK3
Length = 347
Score = 141 (54.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 36/97 (37%), Positives = 51/97 (52%)
Query: 38 GNVQARLRKLN--EGVIQATLSALAGLKCLNMTENVTNILPIDD--MLLAVAQGAIGIAC 93
GN+ RL KL+ + + A AGL L + + + L + ML AV QGA+GI
Sbjct: 165 GNIGTRLAKLDAEDSPYTCLILAAAGLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEI 224
Query: 94 TSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DK M L ++ H+ET A + ER+ L TL+G C
Sbjct: 225 RKGDKAMEDILNTIGHKETTFACLAERSLLRTLEGGC 261
>FB|FBgn0010786 [details] [associations]
symbol:l(3)02640 "lethal (3) 02640" species:7227 "Drosophila
melanogaster" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=ISS] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PRINTS:PR00151 PROSITE:PS00533 EMBL:AE014296 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 GeneTree:ENSGT00390000009083
HSSP:P06983 GO:GO:0033014 FlyBase:FBgn0010786 ChiTaRS:l(3)02640
EMBL:BT023907 EMBL:BT050461 RefSeq:NP_612103.1 UniGene:Dm.2323
SMR:Q9W0G4 STRING:Q9W0G4 EnsemblMetazoa:FBtr0072679 GeneID:46140
KEGG:dme:Dmel_CG9165 UCSC:CG9165-RA InParanoid:Q9W0G4 OMA:PPVICED
GenomeRNAi:46140 NextBio:838752 Uniprot:Q9W0G4
Length = 652
Score = 139 (54.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 32 CNLQREGNVQARLRKLN--EGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAI 89
C+++ GN+ RL KL+ + + A AGL + ++ +L D+L AV QGA+
Sbjct: 151 CDIR--GNLNTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGAL 208
Query: 90 GIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ C +ND ++ L L T ++ ER+FL TL G C
Sbjct: 209 AVECRANDDQVLAMLQKLMCLNTTCRILAERSFLKTLGGGC 249
>UNIPROTKB|G3V1P4 [details] [associations]
symbol:HMBS "Hydroxymethylbilane synthase, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 EMBL:CH471065 KO:K01749
GO:GO:0004418 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 CTD:3145 UniGene:Hs.82609 GeneID:3145
KEGG:hsa:3145 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 RefSeq:NP_001245138.1 ProteinModelPortal:G3V1P4
SMR:G3V1P4 PRIDE:G3V1P4 Ensembl:ENST00000542729 ArrayExpress:G3V1P4
Bgee:G3V1P4 Uniprot:G3V1P4
Length = 304
Score = 71 (30.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 65 EHALEKNEVDLVVHSLKDLPTVL 87
Score = 69 (29.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQ--G-AIGIAC 93
GN+ RLRKL+E A + A AGL+ + V IL ++ + AV Q G ++ +A
Sbjct: 151 GNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQEGGCSVPVAV 210
Query: 94 TSNDKKMAKYL--------GSLNHEETRQAVV 117
+ K YL GS + +ET QA +
Sbjct: 211 HTAMKDGQLYLTGGVWSLDGSDSIQETMQATI 242
>GENEDB_PFALCIPARUM|PFL0480w [details] [associations]
symbol:PFL0480w "porphobilinogen deaminase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=IDA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PRINTS:PR00151
EMBL:AE014188 GO:GO:0020011 KO:K01749 GO:GO:0004418
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782 HSSP:P06983
ProtClustDB:CLSZ2430242 GO:GO:0033014 GenomeReviews:AE014188_GR
RefSeq:XP_001350505.1 ProteinModelPortal:Q8I5V3
EnsemblProtists:PFL0480w:mRNA GeneID:811149 KEGG:pfa:PFL0480w
EuPathDB:PlasmoDB:PF3D7_1209600 HOGENOM:HOG000281189 OMA:RENINTG
Uniprot:Q8I5V3
Length = 435
Score = 95 (38.5 bits), Expect = 0.00058, P = 0.00058
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQREGNVQARLRKLNEGVIQATLSALAG 61
+E LING +D+ VHS+KDVP L + L C L+R+ A L + +++ +
Sbjct: 128 DEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFL-----SIKYKSINDMNT 182
Query: 62 LKCLNMTENVTNI 74
+K ++ TE++ +I
Sbjct: 183 VKSVSKTEDIHHI 195
>UNIPROTKB|Q8I5V3 [details] [associations]
symbol:PBGD "Porphobilinogen deaminase" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=IDA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
Pfam:PF01379 Pfam:PF03900 PRINTS:PR00151 EMBL:AE014188
GO:GO:0020011 KO:K01749 GO:GO:0004418 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 HSSP:P06983
ProtClustDB:CLSZ2430242 GO:GO:0033014 GenomeReviews:AE014188_GR
RefSeq:XP_001350505.1 ProteinModelPortal:Q8I5V3
EnsemblProtists:PFL0480w:mRNA GeneID:811149 KEGG:pfa:PFL0480w
EuPathDB:PlasmoDB:PF3D7_1209600 HOGENOM:HOG000281189 OMA:RENINTG
Uniprot:Q8I5V3
Length = 435
Score = 95 (38.5 bits), Expect = 0.00058, P = 0.00058
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQREGNVQARLRKLNEGVIQATLSALAG 61
+E LING +D+ VHS+KDVP L + L C L+R+ A L + +++ +
Sbjct: 128 DEQLINGNVDLCVHSLKDVPILLPNNIELSCFLKRDTINDAFL-----SIKYKSINDMNT 182
Query: 62 LKCLNMTENVTNI 74
+K ++ TE++ +I
Sbjct: 183 VKSVSKTEDIHHI 195
>UNIPROTKB|G5EA58 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 EMBL:CH471065 KO:K01749 GO:GO:0004418
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 CTD:3145 UniGene:Hs.82609 GeneID:3145
KEGG:hsa:3145 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 RefSeq:NP_001245137.1 ProteinModelPortal:G5EA58
SMR:G5EA58 PRIDE:G5EA58 Ensembl:ENST00000544387 ArrayExpress:G5EA58
Bgee:G5EA58 Uniprot:G5EA58
Length = 321
Score = 71 (30.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL 24
E AL E+D+ VHS+KD+PT L
Sbjct: 82 EHALEKNEVDLVVHSLKDLPTVL 104
Score = 69 (29.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 38 GNVQARLRKLNEGV-IQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQ--G-AIGIAC 93
GN+ RLRKL+E A + A AGL+ + V IL ++ + AV Q G ++ +A
Sbjct: 168 GNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQEGGCSVPVAV 227
Query: 94 TSNDKKMAKYL--------GSLNHEETRQAVV 117
+ K YL GS + +ET QA +
Sbjct: 228 HTAMKDGQLYLTGGVWSLDGSDSIQETMQATI 259
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 130 130 0.00091 102 3 11 22 0.40 31
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 524 (56 KB)
Total size of DFA: 110 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.81u 0.09s 11.90t Elapsed: 00:00:01
Total cpu time: 11.81u 0.09s 11.90t Elapsed: 00:00:01
Start: Fri May 10 16:08:47 2013 End: Fri May 10 16:08:48 2013