BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038122
(130 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255558669|ref|XP_002520359.1| porphobilinogen deaminase, putative [Ricinus communis]
gi|223540457|gb|EEF42025.1| porphobilinogen deaminase, putative [Ricinus communis]
Length = 372
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALINGEIDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 130 DEALINGEIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSASSLAELPSGSVIG 189
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV+QATL ALAGLK LNMTENVT+
Sbjct: 190 TASLRRKSQILHRYPSLSVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTS 249
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L IDDML AVAQGAIGIAC SND KMA YL SLNHEETR AV CERAFL TLDGSC
Sbjct: 250 VLSIDDMLPAVAQGAIGIACRSNDDKMANYLASLNHEETRLAVACERAFLETLDGSC 306
>gi|224094087|ref|XP_002310073.1| predicted protein [Populus trichocarpa]
gi|222852976|gb|EEE90523.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 121 DEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSIIG 180
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV++ATL ALAGLK LNMTENVT+
Sbjct: 181 TASLRRKSQILHRYPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMTENVTS 240
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP+DDML AVAQGAIGIAC SND KM YL SLNHEETR AV CERAFL TLDGSC
Sbjct: 241 ILPLDDMLPAVAQGAIGIACRSNDDKMVNYLASLNHEETRLAVACERAFLETLDGSC 297
>gi|359807499|ref|NP_001240888.1| uncharacterized protein LOC100779132 [Glycine max]
gi|255640018|gb|ACU20300.1| unknown [Glycine max]
Length = 356
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 116/177 (65%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EAL+N EIDIAVHSMKDVPTYL DKTILPCNL RE
Sbjct: 114 DEALLNSEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLADLPPASVIG 173
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV+QATL ALAGLK L+MTENVT+
Sbjct: 174 TASLRRKSQILHRYPSLNVQENFRGNVQTRLRKLNEGVVQATLLALAGLKRLSMTENVTS 233
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL IDDML AVAQGAIGIAC S+D KMA+Y+ SLNHEETR AVVCERAFL TLDGSC
Sbjct: 234 ILSIDDMLPAVAQGAIGIACRSDDDKMAEYIDSLNHEETRLAVVCERAFLQTLDGSC 290
>gi|224081346|ref|XP_002306378.1| predicted protein [Populus trichocarpa]
gi|222855827|gb|EEE93374.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 114/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 121 DEALINGDIDIAVHSMKDVPTYLPEMTILPCNLPREDVRDAFISMSATSLADLPAGSIVG 180
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV++ATL ALAGLK LNMTENVT+
Sbjct: 181 TASLRRKSQILHRFPSLSVEENFRGNVQTRLRKLNEGVVKATLLALAGLKRLNMTENVTS 240
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILPIDDML AVAQGAIGIAC +D KMA YL SLNHEETR AV CERAFL TLDGSC
Sbjct: 241 ILPIDDMLPAVAQGAIGIACRDSDDKMANYLASLNHEETRLAVACERAFLETLDGSC 297
>gi|363807442|ref|NP_001242644.1| uncharacterized protein LOC100812733 [Glycine max]
gi|255635113|gb|ACU17914.1| unknown [Glycine max]
Length = 350
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL DKTILPCNL RE
Sbjct: 108 DEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPSGSIVG 167
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKL+EG++QATL ALAGLK LNMTENVT+
Sbjct: 168 TASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVTS 227
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL IDDML AVAQGAIGIAC SND KMA+YL SLNHEETR AV CERAFL L+GSC
Sbjct: 228 ILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEGSC 284
>gi|296080867|emb|CBI18797.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 114/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EAL+NG+IDIAVHSMKDVPTYL DKTILPCNL RE
Sbjct: 86 DEALLNGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLTAASLSELPAGSIVG 145
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV+QATL ALAGLK LNMTENVT+
Sbjct: 146 TASLRRKSQLLHRYKSLNVLENFRGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTS 205
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL ID+ML AVAQGAIGIAC SND KMA YL SLNHE TR AV CERAFL TLDGSC
Sbjct: 206 ILSIDEMLPAVAQGAIGIACRSNDDKMANYLASLNHEVTRLAVACERAFLETLDGSC 262
>gi|357474093|ref|XP_003607331.1| Porphobilinogen deaminase [Medicago truncatula]
gi|355508386|gb|AES89528.1| Porphobilinogen deaminase [Medicago truncatula]
Length = 369
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 127 DEALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIG 186
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKL+EGV++ATL ALAGLK LNMTENVT+
Sbjct: 187 TASLRRKSQILHRYPSLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMTENVTS 246
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L IDDML AVAQGAIGIAC SND KMA+YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 247 TLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSC 303
>gi|356538495|ref|XP_003537739.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Glycine
max]
Length = 350
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL DKTILPCNL RE
Sbjct: 108 DEALINGDIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPSGSVVG 167
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKL+EG++QATL ALAGLK LNMTENV++
Sbjct: 168 TASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVSS 227
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL IDDML AVAQGAIGIAC SND KMA+YL SLNHEETR AV CERAFL L+GSC
Sbjct: 228 ILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEGSC 284
>gi|2495180|sp|Q43082.1|HEM3_PEA RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|313724|emb|CAA51820.1| hydroxymethylbilane synthase [Pisum sativum]
Length = 369
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL ++TILPCNL RE
Sbjct: 127 DEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPAGSVIG 186
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKL+EGV++ATL ALAGLK LNMTENVT+
Sbjct: 187 TASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMTENVTS 246
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L IDDML AVAQGAIGIAC SND KMA+YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 247 TLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSC 303
>gi|255634492|gb|ACU17610.1| unknown [Glycine max]
Length = 350
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 114/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+ DIAVHSMKDVPTYL DKTILPCNL RE
Sbjct: 108 DEALINGDSDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPSGSVVG 167
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKL+EG++QATL ALAGLK LNMTENV++
Sbjct: 168 TASLRRKSQILHRYPSLNVEENFRGNVQTRLRKLSEGIVQATLLALAGLKRLNMTENVSS 227
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL IDDML AVAQGAIGIAC SND KMA+YL SLNHEETR AV CERAFL L+GSC
Sbjct: 228 ILSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAVSCERAFLEKLEGSC 284
>gi|13676388|dbj|BAB41183.1| porphobilinogen deaminase [Amaranthus tricolor]
Length = 198
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 112/177 (63%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EAL+N EIDIAVHSMKDVPTYL DK ILPCNL+RE
Sbjct: 14 DEALLNNEIDIAVHSMKDVPTYLPDKIILPCNLEREDVRDAFISTTASSLADLPAGSVVG 73
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEG++QATL ALAGLK LNMTENV++
Sbjct: 74 TASLRRKSQLLHRYPSLEVLDNFRGNVQTRLRKLNEGLVQATLLALAGLKRLNMTENVSS 133
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L IDDML AVAQGAIGIAC +D KMA YL LNHEET+ AV CERAFL TLDGSC
Sbjct: 134 VLSIDDMLPAVAQGAIGIACLQDDDKMANYLALLNHEETQLAVACERAFLETLDGSC 190
>gi|449464030|ref|XP_004149732.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Cucumis
sativus]
Length = 375
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++ALING+IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 133 DDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSIIG 192
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV+QATL ALAGL+ LNMTENVT+
Sbjct: 193 TASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENVTS 252
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL ID+ML AVAQGAIGIAC S+D MA YL SLNHEETR AVVCERAFL TLDGSC
Sbjct: 253 ILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSC 309
>gi|297810933|ref|XP_002873350.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
gi|297319187|gb|EFH49609.1| hypothetical protein ARALYDRAFT_908776 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 109/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 140 DEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAASLAELPAGSVVG 199
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL KL G +QATL ALAGLK L+MTENV +
Sbjct: 200 TASLRRKSQILHKYPALRVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVAS 259
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL +D+ML AVAQGAIGIAC ++D KMA YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 260 ILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 316
>gi|15241573|ref|NP_196445.1| Porphobilinogen deaminase [Arabidopsis thaliana]
gi|2495179|sp|Q43316.1|HEM3_ARATH RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|16930521|gb|AAL31946.1|AF419614_1 AT5g08280/F8L15_10 [Arabidopsis thaliana]
gi|313150|emb|CAA51941.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|313838|emb|CAA52061.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|10178270|emb|CAC08328.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|17979402|gb|AAL49926.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|21689853|gb|AAM67570.1| putative hydroxymethylbilane synthase [Arabidopsis thaliana]
gi|332003894|gb|AED91277.1| Porphobilinogen deaminase [Arabidopsis thaliana]
Length = 382
Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 109/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 140 DEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVG 199
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL KL G +QATL ALAGLK L+MTENV +
Sbjct: 200 TASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVAS 259
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL +D+ML AVAQGAIGIAC ++D KMA YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 260 ILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 316
>gi|253787595|dbj|BAH84857.1| putative porphobilinogen deaminase [Cucumis sativus]
Length = 188
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++ALING+IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 3 DDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSIIG 62
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV+QATL ALAGL+ LNMTENVT+
Sbjct: 63 TASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENVTS 122
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL ID+ML AVAQGAIGIAC S+D MA YL SLNHEETR AVVCERAFL TLDGSC
Sbjct: 123 ILSIDEMLPAVAQGAIGIACRSDDDIMANYLASLNHEETRLAVVCERAFLETLDGSC 179
>gi|168059289|ref|XP_001781636.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666950|gb|EDQ53592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 393
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 109/176 (61%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+NG+IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 153 DDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVG 212
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG +QATL ALAGLK L+MTE+VT I
Sbjct: 213 SASLRRQSQLLHKYPHLKVVNFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHVTTI 272
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DDML A+AQGAIGIAC + D KM +YL SLNHE+TR AV CERAFL LDGSC
Sbjct: 273 LDTDDMLPAIAQGAIGIACRTGDTKMEEYLSSLNHEDTRLAVACERAFLAKLDGSC 328
>gi|453056154|pdb|4HTG|A Chain A, Porphobilinogen Deaminase From Arabidopsis Thaliana
Length = 320
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 109/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 78 DEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVG 137
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL KL G +QATL ALAGLK L+MTENV +
Sbjct: 138 TASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVAS 197
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL +D+ML AVAQGAIGIAC ++D KMA YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 198 ILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 254
>gi|449531571|ref|XP_004172759.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Cucumis
sativus]
Length = 376
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 114/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++ALING+IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 133 DDALINGDIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFISLSAGSFAELPAGSIIG 192
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKLNEGV+QATL ALAGL+ LNMTENVT+
Sbjct: 193 TASLRRKSQLLNRYPSLKVLENFRGNVQTRLRKLNEGVVQATLLALAGLRRLNMTENVTS 252
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL ID+ML AVAQGAIGIAC S+D M YL SLNHEETR AVVCERAFL TLDGSC
Sbjct: 253 ILSIDEMLPAVAQGAIGIACRSDDDIMVNYLASLNHEETRLAVVCERAFLETLDGSC 309
>gi|21592624|gb|AAM64573.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 382
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 108/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING IDIAVHSMK VPTYL +KTILPCNL RE
Sbjct: 140 DEALINGHIDIAVHSMKYVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVG 199
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL KL G +QATL ALAGLK L+MTENV +
Sbjct: 200 TASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVAS 259
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL +D+ML AVAQGAIGIAC ++D KMA YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 260 ILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 316
>gi|168057909|ref|XP_001780954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667588|gb|EDQ54214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 299
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 108/176 (61%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+NG+IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 59 DDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPNYSSLAELPEGSVVG 118
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG +QATL ALAGLK L+MTE++T I
Sbjct: 119 SASLRRQSQILHKYPHLKVENFRGNVQTRLRKLSEGTVQATLLALAGLKRLDMTEHITAI 178
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DDML A+AQGAIGIAC + D KM +YL SLNHE TR A+ CERAFL LDGSC
Sbjct: 179 LATDDMLPAIAQGAIGIACRTGDSKMEEYLASLNHEGTRLAISCERAFLAKLDGSC 234
>gi|302817137|ref|XP_002990245.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
gi|300141954|gb|EFJ08660.1| hypothetical protein SELMODRAFT_447969 [Selaginella moellendorffii]
Length = 353
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 108/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++ IDIAVHSMKDVPTYL TILPCNL+RE
Sbjct: 109 DDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPPGSVVG 168
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL+KL EG++ ATL ALAGLK LNMTE+VT
Sbjct: 169 TASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMTEHVTG 228
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP+D+ML A+AQGAIGIAC D+KM +YL SLNHEETR AV CERAFL LDGSC
Sbjct: 229 VLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDGSC 285
>gi|302756929|ref|XP_002961888.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
gi|300170547|gb|EFJ37148.1| hypothetical protein SELMODRAFT_164683 [Selaginella moellendorffii]
Length = 353
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 108/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++ IDIAVHSMKDVPTYL TILPCNL+RE
Sbjct: 109 DDALLDNRIDIAVHSMKDVPTYLPQGTILPCNLRREDARDAFISLKAKSLAELPPGSVVG 168
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL+KL EG++ ATL ALAGLK LNMTE+VT
Sbjct: 169 TASLRRKSQILKRYPHLQVDTNFRGNVQTRLKKLQEGIVTATLLALAGLKRLNMTEHVTG 228
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP+D+ML A+AQGAIGIAC D+KM +YL SLNHEETR AV CERAFL LDGSC
Sbjct: 229 VLPMDEMLPAIAQGAIGIACRQGDEKMERYLASLNHEETRLAVSCERAFLEMLDGSC 285
>gi|102139876|gb|ABF70029.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 328
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 105/149 (70%), Gaps = 20/149 (13%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNL----QRE----------------GNVQ 41
++AL+ G IDIAVHSMKDVPTYL + TILPCNL +R+ GNVQ
Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPASLRRQSQILCRYPSLKVVNLRGNVQ 173
Query: 42 ARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSNDKKMA 101
RL KL G + ATL ALAGLK LNM ENVT+IL +++ML AVAQGAIGIAC SND KM
Sbjct: 174 TRLTKLKNGDVHATLLALAGLKRLNMVENVTSILSMEEMLPAVAQGAIGIACRSNDNKMM 233
Query: 102 KYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+YL SLNHE+TR AV CER FL LDG+C
Sbjct: 234 EYLSSLNHEDTRSAVACEREFLTVLDGNC 262
>gi|357474095|ref|XP_003607332.1| Porphobilinogen deaminase [Medicago truncatula]
gi|355508387|gb|AES89529.1| Porphobilinogen deaminase [Medicago truncatula]
Length = 228
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/162 (57%), Positives = 100/162 (61%), Gaps = 48/162 (29%)
Query: 17 MKDVPTYLLDKTILPCNLQRE--------------------------------------- 37
MKDVPTYL +KTILPCNL RE
Sbjct: 1 MKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYP 60
Query: 38 ---------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGA 88
GNVQ RLRKL+EGV++ATL ALAGLK LNMTENVT+ L IDDML AVAQGA
Sbjct: 61 SLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMTENVTSTLSIDDMLPAVAQGA 120
Query: 89 IGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IGIAC SND KMA+YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 121 IGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSC 162
>gi|357136953|ref|XP_003570067.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like
[Brachypodium distachyon]
Length = 357
Score = 165 bits (418), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 103/176 (58%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 114 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLNAKTLAELPAGSVVG 173
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGLK LNM E T++
Sbjct: 174 SASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSV 233
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGAIGIAC +ND KM YL SLNHE+TR AV CER FL LDG+C
Sbjct: 234 LSVDEMLPAVAQGAIGIACRTNDDKMMDYLSSLNHEDTRLAVACEREFLSVLDGNC 289
>gi|116793769|gb|ABK26871.1| unknown [Picea sitchensis]
Length = 373
Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G+IDIAVHSMKDVPTYL TILPCNL RE
Sbjct: 132 DDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQAGSIVG 191
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL A AGLK L M ++VT +
Sbjct: 192 SASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQHVTCL 251
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ML A+AQGAIGIAC SND KMA YL +LNHEETR AV CERAFL TLDGSC
Sbjct: 252 LSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGSC 307
>gi|148909210|gb|ABR17705.1| unknown [Picea sitchensis]
Length = 373
Score = 164 bits (416), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G+IDIAVHSMKDVPTYL TILPCNL RE
Sbjct: 132 DDALLGGKIDIAVHSMKDVPTYLPSGTILPCNLPREDVRDVFICPTAGSLAELQAGSIVG 191
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL A AGLK L M ++VT +
Sbjct: 192 SASLRRQSQILYRYPSLKVINFRGNVQTRLRKLKEGEVHATLLAFAGLKRLGMIQHVTCL 251
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ML A+AQGAIGIAC SND KMA YL +LNHEETR AV CERAFL TLDGSC
Sbjct: 252 LSTEEMLPAIAQGAIGIACRSNDDKMADYLAALNHEETRLAVACERAFLETLDGSC 307
>gi|217070488|gb|ACJ83604.1| unknown [Medicago truncatula]
gi|388498722|gb|AFK37427.1| unknown [Medicago truncatula]
Length = 214
Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 99/162 (61%), Gaps = 48/162 (29%)
Query: 17 MKDVPTYLLDKTILPCNLQRE--------------------------------------- 37
MKDVPTYL +KTILPCNL RE
Sbjct: 1 MKDVPTYLPEKTILPCNLPREDVRDAFISLSAASLADLPAGSVIGTASLRRKSQILHRYP 60
Query: 38 ---------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGA 88
GNVQ RLRKL+EGV++ATL ALAG K LNMTENVT+ L IDDML AVAQGA
Sbjct: 61 SLSVQDNFRGNVQTRLRKLSEGVVKATLLALAGPKRLNMTENVTSTLSIDDMLPAVAQGA 120
Query: 89 IGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IGIAC SND KMA+YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 121 IGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSC 162
>gi|115444475|ref|NP_001046017.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|75259105|sp|Q6H6D2.1|HEM3_ORYSJ RecName: Full=Porphobilinogen deaminase, chloroplastic; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase; Flags:
Precursor
gi|49388602|dbj|BAD25717.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|113535548|dbj|BAF07931.1| Os02g0168800 [Oryza sativa Japonica Group]
gi|222622259|gb|EEE56391.1| hypothetical protein OsJ_05540 [Oryza sativa Japonica Group]
Length = 358
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 102/176 (57%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 115 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVG 174
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGLK LNM E T++
Sbjct: 175 SASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSV 234
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGAIGIAC S+D M YL SLNHE+TR AV CER FL LDG+C
Sbjct: 235 LSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNC 290
>gi|218190145|gb|EEC72572.1| hypothetical protein OsI_06012 [Oryza sativa Indica Group]
Length = 358
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 102/176 (57%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 115 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVG 174
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGLK LNM E T++
Sbjct: 175 SASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSV 234
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGAIGIAC S+D M YL SLNHE+TR AV CER FL LDG+C
Sbjct: 235 LSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNC 290
>gi|242060650|ref|XP_002451614.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
gi|241931445|gb|EES04590.1| hypothetical protein SORBIDRAFT_04g004640 [Sorghum bicolor]
Length = 340
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++A++ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 99 DDAILQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDARDAFICLTANSLAELPSGCVVG 158
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL G + ATL ALAGLK LNM ENVT+I
Sbjct: 159 SASLRRQSQILCRYPSLKVVNLRGNVQTRLTKLKNGDVHATLLALAGLKRLNMVENVTSI 218
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 219 LSMEEMLPAVAQGAIGIACRSNDNKMMEYLSSLNHEDTRSAVACEREFLTVLDGNC 274
>gi|49388603|dbj|BAD25718.1| putative porphobilinogen deaminase [Oryza sativa Japonica Group]
gi|215686353|dbj|BAG87614.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717107|dbj|BAG95470.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 264
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 102/176 (57%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 21 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVG 80
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGLK LNM E T++
Sbjct: 81 SASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSV 140
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGAIGIAC S+D M YL SLNHE+TR AV CER FL LDG+C
Sbjct: 141 LSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNC 196
>gi|159486921|ref|XP_001701485.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
gi|158271667|gb|EDO97482.1| porphobilinogen deaminase [Chlamydomonas reinhardtii]
Length = 349
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 105/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++G+IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 108 DDALLSGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPVAKDLSELPAGAIVG 167
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKLNEG ATL ALAGLK L+MTE++T
Sbjct: 168 SASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRLDMTEHITKT 227
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID+ML AV+QGAIGIAC ++D L +LNHEETR AVVCERAFL LDGSC
Sbjct: 228 LSIDEMLPAVSQGAIGIACRTDDGASRNLLAALNHEETRIAVVCERAFLTALDGSC 283
>gi|302838564|ref|XP_002950840.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
gi|300263957|gb|EFJ48155.1| hypothetical protein VOLCADRAFT_85406 [Volvox carteri f.
nagariensis]
Length = 355
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G+IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 114 DDALLGGKIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDVFISPTAKDLSELPAGAVVG 173
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKLNEG ATL ALAGLK L+MT ++T I
Sbjct: 174 SASLRRQAQILAKYPHLKVENFRGNVQTRLRKLNEGACSATLLALAGLKRLDMTAHITKI 233
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L I++ML AV+QGAIGIAC + D K L +LNHEETR AVVCERAFL LDGSC
Sbjct: 234 LSIEEMLPAVSQGAIGIACRTQDDASRKLLAALNHEETRIAVVCERAFLAALDGSC 289
>gi|19849543|gb|AAL12220.1| porphobilinogen deaminase [Triticum aestivum]
Length = 308
Score = 161 bits (407), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 101/176 (57%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + ILPCNL RE
Sbjct: 65 DDALLQGSIDIAVHSMKDVPTYLPEGMILPCNLPREDVRDAFICLTAKTLGELPAGSVIA 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGLK L M E T++
Sbjct: 125 SASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLGMPETATSV 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGAIGI C SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 185 LSVDEMLPAVAQGAIGITCRSNDDKMMEYLSSLNHEDTRLAVACEREFLSVLDGNC 240
>gi|168034136|ref|XP_001769569.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679111|gb|EDQ65562.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 108/176 (61%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+NG+IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 121 DDALLNGDIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICPKYSSLAELPEGSVVG 180
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKLNEGV ATL ALAGLK L+MTE++T I
Sbjct: 181 SASLRRQSQLLHRYPHLQVVNFRGNVQTRLRKLNEGVCAATLLALAGLKRLDMTEHITAI 240
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DDML A+AQGAIGIAC + D KM +YL SLNHE+TR A+ CERAFL LDGSC
Sbjct: 241 LETDDMLPAIAQGAIGIACRTGDTKMEEYLASLNHEDTRLAISCERAFLAKLDGSC 296
>gi|307103191|gb|EFN51453.1| hypothetical protein CHLNCDRAFT_33052 [Chlorella variabilis]
Length = 361
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 99/176 (56%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++G IDIAVHSMKDVPTYL T+LPCNL RE
Sbjct: 119 DDALLDGRIDIAVHSMKDVPTYLPAGTVLPCNLPREDVRDVFISAKYKSIAELPEGAVVG 178
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG ATL ALAGLK L + + T+I
Sbjct: 179 SASLRRQAQILAKYPTLQVVNFRGNVQTRLRKLQEGACDATLLALAGLKRLGLADKATSI 238
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ML AVAQGAIGIAC D + A L +LNHEETR A+VCERAFL LDGSC
Sbjct: 239 LSTDEMLPAVAQGAIGIACREGDDRSAAALAALNHEETRLAIVCERAFLAALDGSC 294
>gi|412990390|emb|CCO19708.1| porphobilinogen deaminase [Bathycoccus prasinos]
Length = 376
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 103/176 (58%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++G ++IAVHSMKDVPTYL + TILPC L RE
Sbjct: 124 DDALLDGRVNIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFICLKYDSLSALPTGALVG 183
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ+R+RKL E V+ TL ALAGLK +++TE+ T I
Sbjct: 184 TASLRRQSQLLWKYPELKCVNFRGNVQSRIRKLKEEVVDCTLLALAGLKRMDLTEHATKI 243
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +DML AVAQGAIGIAC +ND KM +YL LNHEETR AV CER FL LDGSC
Sbjct: 244 LDFEDMLPAVAQGAIGIACRTNDDKMQEYLSKLNHEETRLAVECERNFLRALDGSC 299
>gi|102139875|gb|ABF70028.1| porphobilinogen deaminase, chloroplast (hydroxymethylbilane
synthase) (pre-uroporphyrinogen synthase), putative
[Musa acuminata]
Length = 426
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 183 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 242
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ LNM EN T +
Sbjct: 243 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 302
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 303 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNC 358
>gi|255070965|ref|XP_002507564.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
gi|226522839|gb|ACO68822.1| hydroxymethylbilane synthase [Micromonas sp. RCC299]
Length = 353
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 100/174 (57%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL++G IDIAVHSMKDVPTYL + TILPC L RE
Sbjct: 107 ALLDGRIDIAVHSMKDVPTYLPEGTILPCMLPREDVRDAFISVKYDDLSELPEGSLVGTA 166
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ+R+RKL EGV+ TL A+AGL ++MT++ T IL
Sbjct: 167 SLRRQSQLLARFPGLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTQHATKILD 226
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+D ML AVAQGAIGIAC + D K YL SLNHEETR AV CER+FL LDGSC
Sbjct: 227 VDVMLPAVAQGAIGIACRTGDSKQITYLESLNHEETRIAVECERSFLAALDGSC 280
>gi|359497274|ref|XP_003635469.1| PREDICTED: porphobilinogen deaminase, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/94 (81%), Positives = 80/94 (85%)
Query: 37 EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSN 96
GNVQ RLRKLNEGV+QATL ALAGLK LNMTENVT+IL ID+ML AVAQGAIGIAC SN
Sbjct: 153 RGNVQTRLRKLNEGVVQATLLALAGLKRLNMTENVTSILSIDEMLPAVAQGAIGIACRSN 212
Query: 97 DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D KMA YL SLNHE TR AV CERAFL TLDGSC
Sbjct: 213 DDKMANYLASLNHEVTRLAVACERAFLETLDGSC 246
>gi|242060648|ref|XP_002451613.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
gi|241931444|gb|EES04589.1| hypothetical protein SORBIDRAFT_04g004630 [Sorghum bicolor]
Length = 356
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 113 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 172
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ LNM EN T +
Sbjct: 173 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 232
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 233 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVACEREFLAVLDGNC 288
>gi|303274460|ref|XP_003056550.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462634|gb|EEH59926.1| porphobilinogen deaminase, chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 376
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 100/174 (57%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL++G IDIAVHSMKDVPTYL + +ILPC L RE
Sbjct: 130 ALLDGRIDIAVHSMKDVPTYLPEGSILPCMLPREDVRDAFISVKYDDLSELPDGALVGTA 189
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ+R+RKL EGV+ TL A+AGL ++MTE+ T IL
Sbjct: 190 SLRRQSQLLAKFPTLKCVNFRGNVQSRIRKLQEGVVDCTLLAIAGLNRMDMTEHATKILE 249
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D ML AVAQGAIGIAC + D + ++L LNHEETR AV CERAFL +LDGSC
Sbjct: 250 TDVMLPAVAQGAIGIACRTGDSRQLEFLEKLNHEETRIAVECERAFLASLDGSC 303
>gi|413926450|gb|AFW66382.1| porphobilinogen deaminase [Zea mays]
Length = 356
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 113 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVIG 172
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ LNM EN T +
Sbjct: 173 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 232
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL +LNHE+TR AV CER FL LDG+C
Sbjct: 233 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGNC 288
>gi|226509736|ref|NP_001150986.1| LOC100284619 [Zea mays]
gi|195643410|gb|ACG41173.1| porphobilinogen deaminase [Zea mays]
Length = 356
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 104/176 (59%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 113 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVIG 172
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ LNM EN T +
Sbjct: 173 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 232
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL +LNHE+TR AV CER FL LDG+C
Sbjct: 233 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLDGNC 288
>gi|413935720|gb|AFW70271.1| camouflage1 [Zea mays]
Length = 353
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 103/176 (58%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 110 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 169
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ L M EN T +
Sbjct: 170 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAENATAV 229
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 230 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGNC 285
>gi|194707246|gb|ACF87707.1| unknown [Zea mays]
gi|223947939|gb|ACN28053.1| unknown [Zea mays]
gi|413935719|gb|AFW70270.1| camouflage1 [Zea mays]
Length = 356
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 103/176 (58%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 113 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 172
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ L M EN T +
Sbjct: 173 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAENATAV 232
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 233 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGNC 288
>gi|212275007|ref|NP_001130048.1| uncharacterized protein LOC100191140 [Zea mays]
gi|194688160|gb|ACF78164.1| unknown [Zea mays]
gi|413935718|gb|AFW70269.1| camouflage1 [Zea mays]
Length = 394
Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 103/176 (58%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 113 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVVG 172
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ L M EN T +
Sbjct: 173 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLKMAENATAV 232
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGAIGIAC SND KM +YL SLNHE+TR AV CER FL LDG+C
Sbjct: 233 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSSLNHEDTRLAVTCEREFLAVLDGNC 288
>gi|413926451|gb|AFW66383.1| hypothetical protein ZEAMMB73_808224 [Zea mays]
Length = 298
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 101/173 (58%), Gaps = 47/173 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 113 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTANSLAELPAGSVIG 172
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGL+ LNM EN T +
Sbjct: 173 SASLRRQSQILYRYPSLKVVNFRGNVQTRLRKLKEGDVSATLLALAGLRRLNMAENATAV 232
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLD 127
L +++ML AVAQGAIGIAC SND KM +YL +LNHE+TR AV CER FL LD
Sbjct: 233 LSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVLD 285
>gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens]
Length = 333
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 97/174 (55%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ E+DI VHSMKDVPT+L KT+LPC L+RE
Sbjct: 88 ALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTAKSLKDLKDGSVIGSA 147
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ RLRKL+EGV+ ATL A AGLK ++M + VT +L
Sbjct: 148 SLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLKRMDMADEVTAVLE 207
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ML AVAQGAIGI C +D + KY+ +LNHEET V CERAFL LDG+C
Sbjct: 208 WDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERAFLAALDGNC 261
>gi|219117329|ref|XP_002179459.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 329
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 98/176 (55%), Gaps = 49/176 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL++ E+DI VHSMKDVPT+L D T+LPCNL RE
Sbjct: 76 ALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKRIEDIPDGSVIG 135
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL++GV+ ATL A+AGLK ++M T+I
Sbjct: 136 TASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMDMDGCATSI 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ML AVAQGAIGI C +D++ KYL +LNH ET+ V CER FL LDG+C
Sbjct: 196 LEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFLEALDGNC 251
>gi|388492914|gb|AFK34523.1| unknown [Lotus japonicus]
Length = 254
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 93/156 (59%), Gaps = 51/156 (32%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EAL+NGEIDIAVHSMKDVPTYL DKTILPCNL RE
Sbjct: 102 DEALLNGEIDIAVHSMKDVPTYLPDKTILPCNLPREDVRDAFISLSAASLADLPAGSVIG 161
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL+KLNEGV++ATL ALAGLK LNMTENVT+
Sbjct: 162 TASLRRKSQILHRYPSLNVQDNFRGNVQTRLKKLNEGVVKATLLALAGLKRLNMTENVTS 221
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNH 109
L I++ML AVAQGAIGIAC S+D K+ +L+H
Sbjct: 222 TLSIEEMLPAVAQGAIGIACRSDDD---KWQNTLHH 254
>gi|384251101|gb|EIE24579.1| porphobilinogen deaminase [Coccomyxa subellipsoidea C-169]
Length = 359
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 98/176 (55%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL TILPCNL RE
Sbjct: 116 DDALLEGRIDIAVHSMKDVPTYLPPGTILPCNLPREDVRDAFISPIASSLGELPAGSLVG 175
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R+RKLNEGV ATL ALAGLK L++ + T I
Sbjct: 176 SASLRRQAQILHKYPHLKVENFRGNVQTRMRKLNEGVCAATLLALAGLKRLDLADKATAI 235
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +DML AVAQGAIGIAC D L SLNHE+TR AV+CERAFL LDGSC
Sbjct: 236 LSTEDMLPAVAQGAIGIACREGDSAAGDLLASLNHEDTRLAVLCERAFLTALDGSC 291
>gi|298707417|emb|CBJ30046.1| hydroxymethylbilane synthase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 373
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 93/173 (53%), Gaps = 47/173 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L+N ++DI VHSMKDVPT+++ TILPCNL RE
Sbjct: 127 LLNKDVDICVHSMKDVPTWIVPGTILPCNLPREDTSDAFISNKADNIASLPDGSVIGSAS 186
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RLRKL+E ++ ATL A AGLK L M + T++L
Sbjct: 187 LRRQAQLLRANPTFKVVNFRGNVQTRLRKLDEEIVDATLLAFAGLKRLEMAQVATSVLDQ 246
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D ML AVAQGAIGI C ND KYL L H+ET+ AV CERAFL LDG+C
Sbjct: 247 DAMLPAVAQGAIGIQCRENDPTFEKYLAGLCHQETKTAVDCERAFLAALDGNC 299
>gi|145346959|ref|XP_001417948.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578176|gb|ABO96241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 325
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 97/176 (55%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++G IDIAVHSMKDVPTYL + +LPC L RE
Sbjct: 77 DDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLSQLPEGAVVG 136
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ+R+RKL E V+ TL A+AGLK +++ ++ I
Sbjct: 137 TASLRRQSQLLYKFPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQHAKVI 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ML AVAQGAIGI C + D K +L LNHE+TR AV ER+FL LDGSC
Sbjct: 197 IPTEEMLPAVAQGAIGITCRAGDDKQLAFLAKLNHEDTRMAVEGERSFLAALDGSC 252
>gi|308803813|ref|XP_003079219.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
gi|116057674|emb|CAL53877.1| putative porphobilinogen deaminase (ISS) [Ostreococcus tauri]
Length = 441
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 76/176 (43%), Positives = 95/176 (53%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL++G IDIAVHSMKDVPTYL + +LPC L RE
Sbjct: 112 DDALLDGRIDIAVHSMKDVPTYLPEGMVLPCMLPREDVRDAFLCLKYDSLDDLPEGAVVG 171
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ+R+RKL E V+ TL A+AGLK +++ ++ I
Sbjct: 172 TASLRRQSQLLYKYPTLKCVNFRGNVQSRIRKLKEEVVDCTLLAIAGLKRMDLAQHAKLI 231
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + ML AVAQGAIGI C D K +L LNHE+TR AV ERAFL LDGSC
Sbjct: 232 IPTEQMLPAVAQGAIGITCRGGDDKQLAFLAKLNHEDTRMAVEGERAFLAALDGSC 287
>gi|428178623|gb|EKX47498.1| hypothetical protein GUITHDRAFT_162740 [Guillardia theta CCMP2712]
Length = 377
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 94/174 (54%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ E+D VHSMKDVPTYL D T L L RE
Sbjct: 119 ALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKYQSFEEMPEGTVIGSA 178
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ RLRKL++ V+ ATL ALAGLK +NM + VT +L
Sbjct: 179 SLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAGLKRMNMADCVTKVLD 238
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ML AVAQGAIGI S+D K KY+ +LNH++T+ V CER+FL TLDGSC
Sbjct: 239 WDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERSFLATLDGSC 292
>gi|88770654|gb|ABD51930.1| chloroplast hydroxymethylbilane synthase [Guillardia theta]
Length = 346
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 94/174 (54%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ E+D VHSMKDVPTYL D T L L RE
Sbjct: 88 ALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKYQSFEEMPEGTVIGSA 147
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ RLRKL++ V+ ATL ALAGLK +NM + VT +L
Sbjct: 148 SLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAGLKRMNMADCVTKVLD 207
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ML AVAQGAIGI S+D K KY+ +LNH++T+ V CER+FL TLDGSC
Sbjct: 208 WDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERSFLATLDGSC 261
>gi|384262903|ref|YP_005418091.1| porphobilinogen deaminase [Rhodospirillum photometricum DSM 122]
gi|378404005|emb|CCG09121.1| Porphobilinogen deaminase [Rhodospirillum photometricum DSM 122]
Length = 318
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 93/176 (52%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EA+++G IDIAVHSMKDVPTYL D +LPC L+RE
Sbjct: 72 DEAMLSGRIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAVIGRDHPSIDALPLGAVVG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL G + ATL A AGL L M + +T++
Sbjct: 132 TASLRRGAQILAKRPDLKVVSFRGNVQTRLAKLARGEVDATLLAKAGLNRLGMADKITSL 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D ML AVAQGA+G+ C ++D+ ++L LNH ET V ERAFL LDGSC
Sbjct: 192 LEVDQMLPAVAQGAVGVTCRADDEAAHRWLAPLNHAETFLCVTVERAFLAKLDGSC 247
>gi|224008054|ref|XP_002292986.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335]
Length = 330
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 96/176 (54%), Gaps = 49/176 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ E+DI VHSMKDVPT+L + T+LPCNL RE
Sbjct: 77 ALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRIADLPDNSVIG 136
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL++GV+ ATL A+AGLK ++M + T I
Sbjct: 137 TASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMDMDDCATAI 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ML AVAQGAIGI C S+D + KY+ +LN +T V CERAFL LDG+C
Sbjct: 197 LEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLEALDGNC 252
>gi|349801481|gb|AEQ18820.1| porphobilinogen deaminase [Chromera velia]
Length = 375
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 97/174 (55%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ ++DI VHSMKDVPT+L+D TILP NL RE
Sbjct: 118 ALLTKQVDICVHSMKDVPTWLVDGTILPVNLPREDTRDVFISKVAKRIEDLPEGAVVGTA 177
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ RLRKL+E + AT+ ALAGL L MT+ T++L
Sbjct: 178 SLRRAAQVLYKNPKVKVVNFRGNVQTRLRKLDEKQVDATMLALAGLNRLGMTDVATSVLD 237
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D++L AV+QGAIGI C ++D+++ KY+ L +T+ AV CERAFLG LDG+C
Sbjct: 238 HDEILPAVSQGAIGIQCRADDERVQKYIAPLGCAKTKAAVDCERAFLGGLDGNC 291
>gi|397566586|gb|EJK45103.1| hypothetical protein THAOC_36301 [Thalassiosira oceanica]
Length = 361
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 95/176 (53%), Gaps = 49/176 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ E+DI VHSMKDVPT+L D T+LPCNL RE
Sbjct: 108 ALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFITANGEIKTIADLPDNSVIG 167
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL++GV+ ATL A+AGLK + M + T +
Sbjct: 168 TASLRRQAQLLAQNPTFKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMEMQDCATAV 227
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ML AVAQGAIGI C S+D++ KY+ +LN +T V CER FL LDG+C
Sbjct: 228 LDWEEMLPAVAQGAIGIQCRSDDERSLKYIDALNCMDTHVCVNCERGFLEALDGNC 283
>gi|381167824|ref|ZP_09877030.1| Porphobilinogen deaminase, chloroplastic [Phaeospirillum
molischianum DSM 120]
gi|380683197|emb|CCG41842.1| Porphobilinogen deaminase, chloroplastic [Phaeospirillum
molischianum DSM 120]
Length = 322
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 95/176 (53%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++A+++G I IAVHSMKDVPTYL D +LPC L RE
Sbjct: 81 DDAMLDGRIRIAVHSMKDVPTYLPDGIVLPCILPREDVRDAFICLKAKSIADLPAGSVIG 140
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R+RKL EGV+ ATL A+AG++ L + +++T
Sbjct: 141 SSSLRRGAQILNRRPDLKVVNFRGNVQTRMRKLEEGVVDATLLAMAGMRRLGLQQHITGS 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQGAIGI C ++D+ +YL LN +++ V ERAFL LDGSC
Sbjct: 201 IETEDMLPAVAQGAIGITCRADDEDALRYLAPLNCQDSFDRVTAERAFLTKLDGSC 256
>gi|452965164|gb|EME70191.1| porphobilinogen deaminase [Magnetospirillum sp. SO-1]
Length = 315
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 94/176 (53%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EA+++G I +AVHSMKDVPT L D +LPC L RE
Sbjct: 73 DEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILAREDVRDAFISRKYRSLADLPQGAVVG 132
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV+ ATL A+AGL+ L + ++ T+
Sbjct: 133 TSSLRRGSQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATLLAMAGLRRLGLVQHATSA 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DDML AVAQGAIGI C + D++ YL +LN ++ V ERAFL LDGSC
Sbjct: 193 LAEDDMLPAVAQGAIGITCRAGDQESLDYLAALNCPDSFVRVAAERAFLTRLDGSC 248
>gi|83313519|ref|YP_423783.1| porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
gi|82948360|dbj|BAE53224.1| Porphobilinogen deaminase [Magnetospirillum magneticum AMB-1]
Length = 262
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 93/176 (52%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EA+++G I +AVHSMKDVPT L D +LPC L RE
Sbjct: 20 DEAMLSGRIHLAVHSMKDVPTQLPDGIVLPCILPREDVRDAFLSLKVGSLAELPQGAVVG 79
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EGV+ AT+ A+AGL+ L + ++ T+
Sbjct: 80 TSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLEEGVVDATMLAMAGLRRLGLAQHATSA 139
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DDML AVAQGAIGI C ++D+ YL +LN ++ V ERAFL LDGSC
Sbjct: 140 LSEDDMLPAVAQGAIGITCRADDQASLDYLAALNCPDSFVRVAAERAFLTRLDGSC 195
>gi|46201306|ref|ZP_00208053.1| COG0181: Porphobilinogen deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 315
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 94/176 (53%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EA+++G I +AVHSMKDVPT L D +LPC L RE
Sbjct: 73 DEAMLSGRIHLAVHSMKDVPTLLPDGIVLPCILPREDVRDAFISLKAASLADLPQGAVVG 132
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV+ AT+ A+AGL+ L + +VT+
Sbjct: 133 TSSLRRGAQILHRRPDLKVVNFRGNVQTRLRKLDEGVVDATMLAMAGLRRLGLAGHVTSA 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DDML AVAQGAIGI C ++D+ +L +LN ++ V ERAFL LDGSC
Sbjct: 193 LSEDDMLPAVAQGAIGITCRADDEAAHAFLAALNCPDSFVRVAAERAFLTRLDGSC 248
>gi|83594897|ref|YP_428649.1| porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
gi|386351662|ref|YP_006049910.1| porphobilinogen deaminase [Rhodospirillum rubrum F11]
gi|83577811|gb|ABC24362.1| Porphobilinogen deaminase [Rhodospirillum rubrum ATCC 11170]
gi|346720098|gb|AEO50113.1| porphobilinogen deaminase [Rhodospirillum rubrum F11]
Length = 321
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 91/176 (51%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++A++ G IDIAVHSMKDVPTYL D +LPC L+RE
Sbjct: 75 DDAMLAGTIDIAVHSMKDVPTYLPDGIVLPCMLEREDVRDAFLGRDHARLADLPEGSVVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL G AT+ A+AGL L M + +++
Sbjct: 135 TASLRRGAQILAMRPDIKVISFRGNVQTRLDKLARGEADATMLAIAGLNRLGMADKASSV 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID+ML AVAQGA+G+ C + D+ ++L LNH T+ V ERAFL LDGSC
Sbjct: 195 LEIDEMLPAVAQGAVGVTCRAGDETAHRWLAPLNHRATQLCVEIERAFLTRLDGSC 250
>gi|427427598|ref|ZP_18917642.1| Porphobilinogen deaminase [Caenispirillum salinarum AK4]
gi|425883524|gb|EKV32200.1| Porphobilinogen deaminase [Caenispirillum salinarum AK4]
Length = 314
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 89/176 (50%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++A++ G+I+IAVHSMKDV T +LD +LP L RE
Sbjct: 72 DDAMLRGDIEIAVHSMKDVETNILDGIVLPALLPREDVRDAFMCLTAKSIAELKEGAVVG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ+RLRKL+EG + AT+ A+AGL L M E T
Sbjct: 132 TASLRRGAQIKARRPDIQVVNFRGNVQSRLRKLHEGQVDATMLAMAGLNRLGMAEKATAA 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +ML AV QGAIGI C + D + + +LNH+ET V ERAFL LDGSC
Sbjct: 192 LEPTEMLPAVGQGAIGITCRAGDSESIALVEALNHQETYTCVTAERAFLRRLDGSC 247
>gi|312114941|ref|YP_004012537.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
gi|311220070|gb|ADP71438.1| porphobilinogen deaminase [Rhodomicrobium vannielii ATCC 17100]
Length = 313
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 89/176 (50%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL +IDIAVHSMKDV +L D + CNL RE
Sbjct: 72 EEALFADQIDIAVHSMKDVQAFLPDGLEIACNLPREDVRDAFISMKAKSLADMPEGAVIG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ+RL+KL +GV ATL A AGL L +++ +T
Sbjct: 132 TASVRREAFIKNKRPDLKTVLFRGNVQSRLKKLEDGVADATLLASAGLNRLGLSDRITQH 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++DML A AQGAIGI SND+ + + +L+ E T A+ ERAFL LDGSC
Sbjct: 192 IPVEDMLPAPAQGAIGIEIRSNDQVTRELIMALHDEATGYAIDAERAFLSELDGSC 247
>gi|407781913|ref|ZP_11129129.1| porphobilinogen deaminase [Oceanibaculum indicum P24]
gi|407206952|gb|EKE76896.1| porphobilinogen deaminase [Oceanibaculum indicum P24]
Length = 314
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++G IDIAVHSMKDVPT L D ++ C L+RE
Sbjct: 72 EEGLLDGSIDIAVHSMKDVPTVLPDGLVIDCILEREDARDAFLSGKASGIDDLPAGSVIG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G + ATL A+AGL L + + T
Sbjct: 132 TSSLRRQALILSRRPDLKVVSFRGNVGTRLRKLENGDVDATLLAMAGLNRLAIQQTGTTP 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D ML AVAQGAIGI +D ++A L LNH E+ V ERA L LDGSC
Sbjct: 192 IPADVMLPAVAQGAIGIERRQSDDRIAGLLAPLNHSESAIRVTAERAMLAELDGSC 247
>gi|21328661|gb|AAM48667.1| porphobilinogen deaminase [uncultured marine proteobacterium]
Length = 316
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++G IDIAVHSMKD+P D +L L RE
Sbjct: 75 EQAMLDGSIDIAVHSMKDMPVLQPDGLVLDTYLPREDVRDAFISLSGGALSDLSPGAVVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KL V +AT A+AGLK LNM E
Sbjct: 135 TSSLRRQAQLKLRRPDLQVVEFRGNLQTRLKKLENQVAEATFLAMAGLKRLNMDEVPRQA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DDML AVAQGAIGI ND +MA L +++ ET Q + ERAFL LDGSC
Sbjct: 195 IEVDDMLPAVAQGAIGIERRINDGRMADMLAAIHDRETGQRLAAERAFLAALDGSC 250
>gi|259417591|ref|ZP_05741510.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
gi|259346497|gb|EEW58311.1| porphobilinogen deaminase [Silicibacter sp. TrichCH4B]
Length = 318
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 89/178 (50%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL +G ID+AVHSMKD+PT + +L C L RE
Sbjct: 79 EEALTSGGIDLAVHSMKDMPTEQPEGLMLDCYLPREDVRDAFVSPQIRAIADLPEGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV--T 72
GNVQ RL+KL +GV AT A+AGL+ LNM E V T
Sbjct: 139 TSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLQDGVASATFLAMAGLRRLNMAEEVPAT 198
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I P +DML AVAQGAIGI S+D A L +++H ET + ERAFL LDGSC
Sbjct: 199 PIAP-EDMLPAVAQGAIGIERRSDDTTAAAMLEAIHHAETSLRLAAERAFLAALDGSC 255
>gi|407768260|ref|ZP_11115639.1| porphobilinogen deaminase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288973|gb|EKF14450.1| porphobilinogen deaminase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 317
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ GEID+AVHSMKDVPT L D ILP L RE
Sbjct: 75 DDALMGGEIDLAVHSMKDVPTVLPDGMILPTILPREDVRDAFISLKYKSFAEMPAGSVIG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL A+AGL LN E T
Sbjct: 135 SASLRRQAMILNKYPDLKVVTFRGNVQTRLRKLEEGQVDATLLAMAGLNRLNRPEVATAA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML AVAQGAIGI D + +L +LN + V ERA L LDGSC
Sbjct: 195 ISEDDMLPAVAQGAIGITIRETDNQTHNWLSALNCPASAIRVTAERAALRALDGSC 250
>gi|99082369|ref|YP_614523.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
gi|99038649|gb|ABF65261.1| porphobilinogen deaminase [Ruegeria sp. TM1040]
Length = 318
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 87/177 (49%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + L C L RE
Sbjct: 79 EEALLSGGIDIAVHSMKDMPTLQPEGLTLDCYLPREDVRDAFVSPGIHSIADLPEGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNVQ RL+KL GV AT A+AGL+ L+M E V
Sbjct: 139 TSSLRRRAQLLHRRPDLQVVEFRGNVQTRLQKLENGVASATFLAMAGLRRLDMAEAVPAT 198
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DDML AVAQGAIGI S+D A L +++H ET + ERAFL LDGSC
Sbjct: 199 PISVDDMLPAVAQGAIGIERRSSDITTAAMLEAIHHAETSLRLAAERAFLAALDGSC 255
>gi|338741626|ref|YP_004678588.1| porphobilinogen deaminase [Hyphomicrobium sp. MC1]
gi|337762189|emb|CCB68024.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Hyphomicrobium
sp. MC1]
Length = 310
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 88/176 (50%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ EID+AVHSMKD+ T L D ++ L RE
Sbjct: 69 EEALLTNEIDVAVHSMKDMQTVLPDGLVIGAVLPREDPRDAFISLRHESFATLPQNAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL +GV +AT A+AGLK L MTE +T+
Sbjct: 129 TSSLRRKAQVLHARPDLRVVDFRGNVQTRLRKLEDGVAEATFLAVAGLKRLGMTERITSP 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ ML AVAQG IG+ + D+ + + +LN E T AV ERAFL L+GSC
Sbjct: 189 VSMEHMLPAVAQGVIGLEIRNGDELVTPIVAALNDETTAWAVAAERAFLARLEGSC 244
>gi|319780787|ref|YP_004140263.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166675|gb|ADV10213.1| porphobilinogen deaminase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 308
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G IDIAVHS KD+PT L D L L RE
Sbjct: 68 EEALLAGRIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKVAKAIAELPRGAKVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EGV T+ A AGLK L + VT++
Sbjct: 128 SSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLEEGVAAGTILAYAGLKRLGLEHVVTDL 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D A QGAIGI D+ + K L +++ T QA+ CERAFL LDGSC
Sbjct: 188 IPLDVFPPAPGQGAIGIETRIGDRDVEKMLAAVHDVPTGQALACERAFLAALDGSC 243
>gi|92116183|ref|YP_575912.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
gi|123387219|sp|Q1QQP5.1|HEM3_NITHX RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|91799077|gb|ABE61452.1| porphobilinogen deaminase [Nitrobacter hamburgensis X14]
Length = 316
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G ID AVHS KDVPT+L D T LP L RE
Sbjct: 74 EEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSIVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRKL G ATL ALAGL L + + T I
Sbjct: 134 TASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRATRI 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ L AV QGAI I +D ++ ++ ++ ET A+ ER+FL LDGSC
Sbjct: 194 LETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSC 249
>gi|407772496|ref|ZP_11119798.1| porphobilinogen deaminase [Thalassospira profundimaris WP0211]
gi|407284449|gb|EKF09965.1| porphobilinogen deaminase [Thalassospira profundimaris WP0211]
Length = 314
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ GEID+AVHSMKDVPT L D ILP L RE
Sbjct: 72 DDALMGGEIDLAVHSMKDVPTVLPDGMILPTILPREDVRDAFISLKYKSFAEMPAGSVIG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+E + ATL A+AGL L + T
Sbjct: 132 SASLRRQAMILNKYPDLKVVTFRGNVQTRLRKLSEEQVDATLLAMAGLNRLGQPDIATAP 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML AVAQGAIGI +D + K+L +L+ E + V ERA L LDGSC
Sbjct: 192 ISEDDMLPAVAQGAIGITIREDDAQCKKWLAALHCETSAIRVAAERAALKALDGSC 247
>gi|337265612|ref|YP_004609667.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
gi|336025922|gb|AEH85573.1| porphobilinogen deaminase [Mesorhizobium opportunistum WSM2075]
Length = 308
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G IDIAVHS KD+PT L D L L RE
Sbjct: 68 EEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLSREDARDAYVGKATKTIADLPRGAKVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T+ A AGLK L + VT++
Sbjct: 128 SSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLDHVVTDL 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D A QGAIGI D+ + K L +++ T QA+ CERAFL LDGSC
Sbjct: 188 IPLDVFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSC 243
>gi|83952840|ref|ZP_00961570.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
gi|83835975|gb|EAP75274.1| porphobilinogen deaminase [Roseovarius nubinhibens ISM]
Length = 304
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ G+ID+AVHSMKD+P + I+ C L RE
Sbjct: 64 EDALLTGDIDLAVHSMKDMPVLQPEGLIIDCYLPREDVRDAFICPTGRNLSEMAPGTKVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T A+AGL L TE +T
Sbjct: 124 SSSLRRRAQVLVAHPQLEVVEFRGNVQTRLRKLDEGVAACTFLAMAGLNRLKRTEVITRA 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ML AVAQGAIGI +D A L +++H T Q + ERAFL LDGSC
Sbjct: 184 LEPEEMLPAVAQGAIGIERRRDDSGAAMMLEAIHHGPTGQRLAAERAFLAALDGSC 239
>gi|75674669|ref|YP_317090.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
gi|123745784|sp|Q3SVF3.1|HEM3_NITWN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|74419539|gb|ABA03738.1| porphobilinogen deaminase [Nitrobacter winogradskyi Nb-255]
Length = 316
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G ID AVHS KDVPT+L D T LP L RE
Sbjct: 74 EEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK++ G ATL ALAGL L + + T I
Sbjct: 134 TASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKATRI 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ L AV QGAI I +D ++ ++ ++ ET A+ ER+FL LDGSC
Sbjct: 194 LETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSC 249
>gi|254474607|ref|ZP_05087993.1| porphobilinogen deaminase [Ruegeria sp. R11]
gi|214028850|gb|EEB69685.1| porphobilinogen deaminase [Ruegeria sp. R11]
Length = 320
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++G IDIAVHSMKD+P D +L L RE
Sbjct: 80 EEDLLSGAIDIAVHSMKDMPVQQPDGLVLDTYLPREDVRDAFISPSLTSIHDLAKGAVVG 139
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV + T A+AGL L M + N
Sbjct: 140 TSSLRRRAQLLHRRPDLNVVQFRGNVQTRLRKLSEGVAECTFLAMAGLNRLAMADVPANA 199
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQGAIGI ++D + A L +++ ++T Q + ERAFL LDGSC
Sbjct: 200 IETNDMLPAVAQGAIGIERRTSDNRAADMLAAIHDQQTGQRLAAERAFLAALDGSC 255
>gi|85713686|ref|ZP_01044676.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
gi|85699590|gb|EAQ37457.1| porphobilinogen deaminase [Nitrobacter sp. Nb-311A]
Length = 316
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G ID AVHS KDVPT+L D T LP L RE
Sbjct: 74 EEALLAGAIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPRAASLHDLPAGSIVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK++ G ATL ALAGL L + + T I
Sbjct: 134 TASLRRQAMVLRLRPDLKVNALRGNVETRLRKIDAGEADATLLALAGLNRLGLQDKATRI 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGAI I +D ++ ++ ++ ET A+ ER+FL LDGSC
Sbjct: 194 LETEEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSC 249
>gi|372279646|ref|ZP_09515682.1| porphobilinogen deaminase [Oceanicola sp. S124]
Length = 315
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +GEIDIAVHSMKD+P + +L C L RE
Sbjct: 75 EVALSDGEIDIAVHSMKDMPVEQPEGLVLDCYLPREDVRDAFVSLNHASLADVPEGAVMG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV +AT A+AGL L M E +
Sbjct: 135 TSSLRRRAQLLVRRPDLQVVEFRGNVQTRLRKLSEGVAEATFLAMAGLNRLEMAEVAKSP 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ML AVAQGAIGI S D A L +++ T Q + ERAFL LDGSC
Sbjct: 195 IEPDQMLPAVAQGAIGIERRSADSATAALLEAIHDRTTAQRLAAERAFLTRLDGSC 250
>gi|13473577|ref|NP_105145.1| porphobilinogen deaminase [Mesorhizobium loti MAFF303099]
gi|23821698|sp|Q98EI7.1|HEM3_RHILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|14024327|dbj|BAB50931.1| hydroxymethylbilane synthase [Mesorhizobium loti MAFF303099]
Length = 308
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G IDIAVHS KD+PT L D L L RE
Sbjct: 68 EEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLLRGAKVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T+ A AGLK L + T++
Sbjct: 128 SSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLEHVATDL 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D A QGAIGI D+ + K L +++ T QA+ CERAFL LDGSC
Sbjct: 188 MPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSC 243
>gi|114765839|ref|ZP_01444932.1| porphobilinogen deaminase [Pelagibaca bermudensis HTCC2601]
gi|114541838|gb|EAU44875.1| porphobilinogen deaminase [Roseovarius sp. HTCC2601]
Length = 319
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++G IDIAVHSMKD+PT + +L C L RE
Sbjct: 79 EEQLLSGGIDIAVHSMKDMPTEQPEGLVLDCYLPREDERDAFISPGHAGLAALPEGTVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV AT A+AGL+ ++MT+
Sbjct: 139 TSSLRRRAQLLNRRPDLQVVEFRGNVQTRLKKLEDGVAAATFLAMAGLRRMDMTDIPMTA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML A+AQGAIGI S+D + L +++ +T + ER FL LDGSC
Sbjct: 199 MSPDDMLPAIAQGAIGIERRSDDSRTGDMLAAIHDTDTATRLAAERTFLAALDGSC 254
>gi|85705298|ref|ZP_01036397.1| porphobilinogen deaminase [Roseovarius sp. 217]
gi|85670171|gb|EAQ25033.1| porphobilinogen deaminase [Roseovarius sp. 217]
Length = 315
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 91/176 (51%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
E+AL+ GEIDIAVHSMKD+P LL T LP
Sbjct: 75 EQALLTGEIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPLVGSLADLPAGALVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL+KL +GV T A+AGL L +E T
Sbjct: 135 TSSLRRKAQVLVAYPHLQVVEFRGNVQTRLKKLADGVATCTFLAMAGLNRLGRSEVATGA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + ML AVAQGAIGI ++D + A+ L +++H+ET Q +V ERAFL LDGSC
Sbjct: 195 IDPEVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
>gi|190683048|gb|ACE81820.1| hydroxymethylbilane synthetase [Oxyrrhis marina]
Length = 395
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 69/175 (39%), Positives = 81/175 (46%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ AL++GE+D VHSMKDVPT + T + L RE
Sbjct: 138 DRALLSGEVDCCVHSMKDVPTTVAPGTEIVAYLPREDTRDVFLSAKYATLADLPDGAVVG 197
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNVQ RLRKL G + T A AGLK L M T +L
Sbjct: 198 TASLRRQAQILAQKNVVVTNFRGNVQTRLRKLAAGTVDCTFLAYAGLKRLGMLAEATQVL 257
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DML A+AQGA+GI SND + L L+HE TR AV ERAFL LDGSC
Sbjct: 258 EWSDMLPAIAQGAVGIQIRSNDAALRGTLSQLDHEPTRLAVETERAFLRALDGSC 312
>gi|433772505|ref|YP_007302972.1| porphobilinogen deaminase [Mesorhizobium australicum WSM2073]
gi|433664520|gb|AGB43596.1| porphobilinogen deaminase [Mesorhizobium australicum WSM2073]
Length = 308
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G IDIAVHS KD+PT L L L RE
Sbjct: 68 EEALLAGAIDIAVHSSKDMPTQLPPGLELSAFLPREDARDAFVGRAAKTIAELPQGAKVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T+ A AGLK L + + T++
Sbjct: 128 SSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVASGTILAYAGLKRLGLEDVATDL 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D A QGAIGI D+ + K L +++ T QA+ CERAFL LDGSC
Sbjct: 188 MPLDSFPPAPGQGAIGIETRIGDRDVEKMLVAIHDVATGQALACERAFLAALDGSC 243
>gi|300024951|ref|YP_003757562.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526772|gb|ADJ25241.1| porphobilinogen deaminase [Hyphomicrobium denitrificans ATCC 51888]
Length = 310
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EIDIAVHSMKD+ T L D L L RE
Sbjct: 69 EDALFAREIDIAVHSMKDMQTELPDGLALGAVLPREDPRDAFISLKHANISALPTGAIVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRKL +G+ +AT A+AGL L +++ +T I
Sbjct: 129 TSSLRRKSQVLSIRPDLSVIDFRGNVETRLRKLKDGIAEATFLAVAGLNRLGLSDRITAI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P DML A AQGAIG+ + DK+ ++ LN +++AV ERAFL L+GSC
Sbjct: 189 VPSADMLPAAAQGAIGLEIRTGDKEAEAFVAPLNDVNSQRAVTAERAFLARLEGSC 244
>gi|294676723|ref|YP_003577338.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
gi|12280937|gb|AAG50298.1| porphobilinogen deaminase [Rhodobacter capsulatus]
gi|294475543|gb|ADE84931.1| hydroxymethylbilane synthase [Rhodobacter capsulatus SB 1003]
Length = 317
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G IDIAVHSMKD+PT + IL C L RE
Sbjct: 78 EEAMLAGSIDIAVHSMKDMPTLQPEGLILDCYLPREDTRDAFVSMKYNSLAELPEGAVVG 137
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R++KL EGV AT ALAGL L M+E +
Sbjct: 138 TSSLRRRAQLAARRPDLKMVEFRGNVQTRMKKLGEGVADATFLALAGLNRLGMSEVAKSA 197
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQG IGI D + L +++H + + CER+FL TLDGSC
Sbjct: 198 IEPEDMLPAVAQGCIGIERREADTRAKMLLDAIHHAPSGLRLACERSFLLTLDGSC 253
>gi|389875943|ref|YP_006369508.1| porphobilinogen deaminase [Tistrella mobilis KA081020-065]
gi|388526727|gb|AFK51924.1| Porphobilinogen deaminase [Tistrella mobilis KA081020-065]
Length = 329
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 86/178 (48%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEALI G ID+AVHSMKD+PT L + + L RE
Sbjct: 72 EEALITGAIDLAVHSMKDMPTELPEGLTITALLPREDPRDAFLSLKARRLDDLPAGAVIG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL +L EG I ATL A+AGL L +TE +
Sbjct: 132 TASLRRQAQLLAARPDLTVVPLRGNVQTRLSRLREGRIDATLLAMAGLNRLKLTE--VDR 189
Query: 75 LPIDD--MLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
PID ML AVAQGAIGI S D + ++G+L+ ET AV+ ERA L LDGSC
Sbjct: 190 SPIDPAVMLPAVAQGAIGIETRSADDRTNAWVGALDDGETALAVIAERALLAVLDGSC 247
>gi|89056336|ref|YP_511787.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
gi|88865885|gb|ABD56762.1| porphobilinogen deaminase [Jannaschia sp. CCS1]
Length = 318
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE ++ IDIAVHSMKD+PT D +L C L RE
Sbjct: 79 EEDMLTSSIDIAVHSMKDMPTVQPDGLMLDCYLPREDVRDAFVSVNHDGLHALPEGAIVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R++KL GV AT A+AGL+ L M E V +
Sbjct: 139 SSSLRRRAQLFARRPDLNVVEFRGNVQTRMKKLGGGVADATFLAMAGLRRLGMEEVVKSA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++DML AVAQGAIGI +D + L ++++ ET Q + ER+FL LDGSC
Sbjct: 199 IEVEDMLPAVAQGAIGIERRVSDTRAGDMLAAIHNTETGQRLAAERSFLKGLDGSC 254
>gi|149204076|ref|ZP_01881044.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
gi|149142518|gb|EDM30563.1| porphobilinogen deaminase [Roseovarius sp. TM1035]
Length = 315
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 91/176 (51%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
E+A++ G+IDIAVHSMKD+P LL T LP
Sbjct: 75 EQAMLTGDIDIAVHSMKDMPVLQPEGLLLDTYLPREDVRDAFVSPTVASLADLPAGSLVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL+KL +GV T A+AGL L +E T
Sbjct: 135 TSSLRRKAQVLVAYPHLEVVEFRGNVQTRLKKLEDGVAACTFLAMAGLNRLGRSEVATCA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ML AVAQGAIGI ++D + A+ L +++H+ET Q +V ERAFL LDGSC
Sbjct: 195 IDADVMLPAVAQGAIGIERRADDTRAAEMLAAIHHKETGQRLVSERAFLAALDGSC 250
>gi|418055405|ref|ZP_12693460.1| Porphobilinogen deaminase [Hyphomicrobium denitrificans 1NES1]
gi|353210987|gb|EHB76388.1| Porphobilinogen deaminase [Hyphomicrobium denitrificans 1NES1]
Length = 310
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID+AVHSMKD+ T L D + L RE
Sbjct: 69 EDALFANEIDVAVHSMKDMQTALPDGLAIGATLPREDPRDAFISLKHANIGALPRGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRKL +GV +AT A+AGL L + + +T I
Sbjct: 129 TSSLRRKSQVLSVRPDLSVIDFRGNVETRLRKLKDGVAEATFLAVAGLNRLGLADRITAI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P +DML A AQGAIG+ + D+ A + LN T AV ERAFL L+GSC
Sbjct: 189 VPAEDMLPAAAQGAIGLEIRAGDQGAAALVAPLNDAPTALAVTAERAFLARLEGSC 244
>gi|323136449|ref|ZP_08071531.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
gi|322398523|gb|EFY01043.1| porphobilinogen deaminase [Methylocystis sp. ATCC 49242]
Length = 308
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ ALI G+ID+AVHS KD+PT+L + ++ L RE
Sbjct: 69 DSALIAGDIDLAVHSSKDLPTHLPAEIVIAGYLPREDARDAWIGRNGVTLDQLPAGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL K+ G I ATL ALAGLK L + + T +
Sbjct: 129 TASLRRAAQVKRLRPDVQTTLLRGNVHTRLNKVERGEIDATLLALAGLKRLGLADRATAL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+DD AV QGAIGI +ND + L L E T A++ ERAFL LDGSC
Sbjct: 189 LPLDDFPPAVGQGAIGITSRANDPETRAALAPLLDEATALALLAERAFLAALDGSC 244
>gi|390449777|ref|ZP_10235378.1| porphobilinogen deaminase [Nitratireductor aquibiodomus RA22]
gi|389663504|gb|EIM75031.1| porphobilinogen deaminase [Nitratireductor aquibiodomus RA22]
Length = 309
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G ID+AVHS KD+PT L D + L+RE
Sbjct: 69 EEAMLDGRIDLAVHSSKDMPTVLPDGLEISAFLEREDVRDVFIGRSIAKLEDLPQGAKLG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EGV + TL ALAGL L M T +
Sbjct: 129 TSSLRRQALVLRLRPDLDVGMFRGNVQTRLRKLEEGVAEGTLLALAGLNRLGMPHIATEV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + A+ QGAI I D ++ + +++H ET A++CERAFLG LDGSC
Sbjct: 189 MDPERFPPALGQGAICIESRIGDTRIGPMIAAIHHAETGNALLCERAFLGALDGSC 244
>gi|255262067|ref|ZP_05341409.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104402|gb|EET47076.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 326
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++ G+IDIAVHSMKD+P D ++ L RE
Sbjct: 87 EDAMLQGDIDIAVHSMKDMPVLQPDGLLIDTYLPREDNRDAFIALDGSGLKDLAEGATVG 146
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KL +GV +AT A+AGL L M +
Sbjct: 147 TSSLRRHAQLMNRRPDLNIVEFRGNLQTRLKKLGDGVAEATFLAMAGLNRLKMDDVPRTA 206
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML AVAQGAIGI ++D +MA+ L +++ T Q + ERAFL LDGSC
Sbjct: 207 IETDDMLPAVAQGAIGIERRADDSRMAEMLEAIHDGPTGQRLAAERAFLKALDGSC 262
>gi|84516581|ref|ZP_01003940.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
gi|84509617|gb|EAQ06075.1| porphobilinogen deaminase [Loktanella vestfoldensis SKA53]
Length = 314
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 89/176 (50%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP----TYLLDKTILP-------------------------- 31
E+AL++G IDIAVHSMKD+P + LL T LP
Sbjct: 75 EDALLDGSIDIAVHSMKDMPVEQPSGLLLDTYLPREDVRDAFVSLTARGLDDLEHGATVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL KL GV +AT A+AGL LNMT+
Sbjct: 135 TSSLRRRSQLLVRRPDLNVVEFRGNVQTRLMKLGNGVAEATFLAMAGLNRLNMTDVPRTA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML A+AQGAIGI ++D + A L +++H T Q + ER+FL LDGSC
Sbjct: 195 IAPEDMLPAIAQGAIGIERRADDSRAAAMLEAIHHGPTGQRLAAERSFLAHLDGSC 250
>gi|440228201|ref|YP_007335292.1| porphobilinogen deaminase [Rhizobium tropici CIAT 899]
gi|440039712|gb|AGB72746.1| porphobilinogen deaminase [Rhizobium tropici CIAT 899]
Length = 309
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L +GE+D AVHS KD+ T L L L RE
Sbjct: 69 EEKLTSGELDFAVHSAKDMATKLPQGLALTAYLPREDIRDSVIGRTAPKLIELPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G+VQ RLRKL EG ATL ALAGLK L M E +T+I
Sbjct: 129 SASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLALAGLKRLGMVEVITDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ A AQGAI I +D++M + L ++N T AV CERAFL LDGSC
Sbjct: 189 LDPDEFPPAPAQGAIAIESRIDDQQMNELLAAVNDAPTFDAVSCERAFLAALDGSC 244
>gi|170738754|ref|YP_001767409.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
gi|168193028|gb|ACA14975.1| porphobilinogen deaminase [Methylobacterium sp. 4-46]
Length = 311
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL GEID+AVHSMKDV T+L D ++ C L+R+
Sbjct: 71 EQALFAGEIDVAVHSMKDVETWLPDGLVIACILERDDPRDAFLSLASGSLAELPAGARVG 130
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN R+RKL EGV ATL A+AGL+ L + +
Sbjct: 131 TSSLRRGAQVLMRRPDLRIVPLRGNANTRIRKLEEGVCDATLLAIAGLERLGLAHLARTV 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+++ML AVAQGA+GI C + D+ + L ++ T A+ ER L LDGSC
Sbjct: 191 IPVEEMLPAVAQGALGIECRAADEDVIALLQAVACPRTTTALAAERGLLAELDGSC 246
>gi|374333223|ref|YP_005083407.1| porphobilinogen deaminase [Pseudovibrio sp. FO-BEG1]
gi|359346011|gb|AEV39385.1| Porphobilinogen deaminase [Pseudovibrio sp. FO-BEG1]
Length = 307
Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ ID+AVHS KD+PT L D + L RE
Sbjct: 69 EEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTDLPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RLRKL+EGV+ AT A AGL+ L + VT++
Sbjct: 129 SSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLGQGDLVTSL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGAIGI D++ A+ L ++H ET ++ ERA+L +DGSC
Sbjct: 189 MDLEHFLPAVGQGAIGIEARLGDEETARVLAPIHHAETESRLLLERAYLAEMDGSC 244
>gi|254473214|ref|ZP_05086612.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
gi|211957935|gb|EEA93137.1| porphobilinogen deaminase [Pseudovibrio sp. JE062]
Length = 307
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ ID+AVHS KD+PT L D + L RE
Sbjct: 69 EEALLDKSIDLAVHSSKDMPTVLPDGLGMTAYLPREDVRDAFISPKVEKLTDLPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RLRKL+EGV+ AT A AGL+ L + VT++
Sbjct: 129 SSSLRRQAQIKRLRPDLDVVMYRGNLQTRLRKLDEGVVDATFLAYAGLRRLGQGDLVTSL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGAIGI D++ A+ L ++H ET ++ ERA+L +DGSC
Sbjct: 189 MDLEHFLPAVGQGAIGIEARLGDEETARILAPIHHAETESRLLLERAYLAEMDGSC 244
>gi|149915548|ref|ZP_01904074.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
gi|149810440|gb|EDM70283.1| porphobilinogen deaminase [Roseobacter sp. AzwK-3b]
Length = 304
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++GEIDIA+HSMKD+P + +L L RE
Sbjct: 64 EEAMLSGEIDIAIHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSPHVGGLADLEPGAKVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV T A+AGL L +E T
Sbjct: 124 TSSLRRKAQVLVAYPHLDVVEFRGNVQTRLKKLQDGVAACTFLAMAGLNRLGRSEVATAA 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ML AVAQGAIGI +D + A+ L +++ T Q + ERAFL LDGSC
Sbjct: 184 IETDEMLPAVAQGAIGIERRRDDTRTAEMLAAIHDTPTGQRLAAERAFLAALDGSC 239
>gi|260425851|ref|ZP_05779830.1| porphobilinogen deaminase [Citreicella sp. SE45]
gi|260420343|gb|EEX13594.1| porphobilinogen deaminase [Citreicella sp. SE45]
Length = 319
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L+ G IDIAVHSMKD+PT + +L C L RE
Sbjct: 79 EEQLMTGGIDIAVHSMKDMPTLQPEGLMLDCYLPREDVRDAFISPGHGGLGDLPAGTVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KL +GV AT A+AGL + MT+
Sbjct: 139 TSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLEDGVAAATFLAMAGLNRMGMTQLPMTA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ML AVAQGAIGI S+D + A+ L +++ +T + ERAFL LDGSC
Sbjct: 199 MSPDEMLPAVAQGAIGIERRSDDSRAAEMLAAIHDRDTALRLGAERAFLAELDGSC 254
>gi|407975324|ref|ZP_11156230.1| porphobilinogen deaminase [Nitratireductor indicus C115]
gi|407429409|gb|EKF42087.1| porphobilinogen deaminase [Nitratireductor indicus C115]
Length = 309
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G ID+AVHS KD+PT L D + L+RE
Sbjct: 69 EEALLDGRIDLAVHSSKDMPTVLPDGLEISAFLEREDVRDVFIGRSVASLEHLAHGAKLG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EGV + TL ALAGLK L M + +
Sbjct: 129 TSSLRRQALVLRLRPDLEVGMFRGNVQTRLRKLEEGVAEGTLLALAGLKRLGMEHVASEV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A+ QGAI I D ++ + +++H T + CERAFLGTLDGSC
Sbjct: 189 MDPARFPPALGQGAICIESRIGDARIGPMVAAIHHAPTGAELACERAFLGTLDGSC 244
>gi|86359485|ref|YP_471377.1| porphobilinogen deaminase [Rhizobium etli CFN 42]
gi|86283587|gb|ABC92650.1| porphobilinogen deaminase protein [Rhizobium etli CFN 42]
Length = 309
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++GE+D AVHS KD+PT+L D L L RE
Sbjct: 69 EQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVVGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G+V+ RLRKL+EG + ATL ALAGLK L E +T++
Sbjct: 129 SSSLRRQALIRRMRPDINVITFRGSVETRLRKLDEGQVDATLLALAGLKRLGKVEVITDV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D K+ L ++N T +V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRVGDTKIDDLLAAVNDATTFDSVSCERAFLAALDGSC 244
>gi|307942602|ref|ZP_07657950.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
gi|307774241|gb|EFO33454.1| porphobilinogen deaminase [Roseibium sp. TrichSKD4]
Length = 307
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 92/176 (52%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKT-ILP-------------------------- 31
E+ L++G +D+AVHS KD+PT L LD T LP
Sbjct: 69 EDMLLDGSLDLAVHSSKDMPTVLPAGLDITAFLPREDVRDAFISPKAKTLRDLPHGAVVG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RLRKL+EGV+ ATL A AGLK L + + VT++
Sbjct: 129 SSSLRRQAMVKRLRPDIDVVMYRGNVQTRLRKLDEGVVDATLLAHAGLKRLGLGDVVTSV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DD + AV QGAI + +D+K L ++N ETR + ERAFLG LDG+C
Sbjct: 189 IEADDFVPAVGQGAICLESRLDDEKTNGLLSAINDPETRVRLEAERAFLGVLDGTC 244
>gi|254502424|ref|ZP_05114575.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
gi|222438495|gb|EEE45174.1| porphobilinogen deaminase [Labrenzia alexandrii DFL-11]
Length = 308
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G ID+AVHS KD+PT L D L L RE
Sbjct: 69 EEAMLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLMDLPHGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RLRKL EG + ATL A AGL+ L + E VT++
Sbjct: 129 SSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGEVDATLLAYAGLRRLGLEEEVTSL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D L AV QGAI I D++ + L +++ ET+ + ERAFL LDGSC
Sbjct: 189 LETEDFLPAVGQGAICIESREGDERTLEMLQAIHDRETQIRLDAERAFLAVLDGSC 244
>gi|260574199|ref|ZP_05842204.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
gi|259023665|gb|EEW26956.1| porphobilinogen deaminase [Rhodobacter sp. SW2]
Length = 314
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G IDIAVHSMKD+PT + +L C L RE
Sbjct: 75 EDALLDGSIDIAVHSMKDMPTLQPEGLLLDCYLPREDVRDAFVSPTVARLADLPHGATVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R++KL +GV AT A+AGL L M +
Sbjct: 135 SSSLRRRAQLAARRPDLNLVEFRGNVQTRMKKLEDGVAVATFLAMAGLNRLGMAHVARSA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +++ML AVAQGAIGI + D + L ++H T + CERA+L LDGSC
Sbjct: 195 IEVEEMLPAVAQGAIGIERRTADPRAEALLAGIHHGPTGIRLACERAYLQELDGSC 250
>gi|407778429|ref|ZP_11125693.1| porphobilinogen deaminase [Nitratireductor pacificus pht-3B]
gi|407299800|gb|EKF18928.1| porphobilinogen deaminase [Nitratireductor pacificus pht-3B]
Length = 305
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEALI+G ID+AVHS KD+PT L D + L+RE
Sbjct: 65 EEALIDGRIDLAVHSSKDMPTVLPDGLEISAFLEREDVRDVFIGRSVASLGSLPQGAKLG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EGV + TL ALAGLK L + + I
Sbjct: 125 TSSLRRQALVLRLRPDLEVGMFRGNVQTRLRKLEEGVAEGTLLALAGLKRLGVAHIASEI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + A+ QGAI I D+++ + +++H T A+ CERAFL LDGSC
Sbjct: 185 MDPERFPPALGQGAICIESRIGDRRIGPMVAAIHHTATGFALACERAFLAALDGSC 240
>gi|62319114|dbj|BAD94270.1| hydroxymethylbilane synthase [Arabidopsis thaliana]
Length = 130
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 54/64 (84%)
Query: 67 MTENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTL 126
MTENV +IL +D+ML AVAQGAIGIAC ++D KMA YL SLNHEETR A+ CERAFL TL
Sbjct: 1 MTENVASILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETL 60
Query: 127 DGSC 130
DGSC
Sbjct: 61 DGSC 64
>gi|163745168|ref|ZP_02152528.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
gi|161381986|gb|EDQ06395.1| porphobilinogen deaminase [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 87/176 (49%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
E AL++G IDIAVHSMKD+PT L+ T LP
Sbjct: 75 EAALLDGSIDIAVHSMKDMPTLQPGGLVIDTYLPREDMRDAFISPHLKSIADLPEGAVVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+Q RL+KL +GV +AT A+AGL L M E
Sbjct: 135 TSSLRRRAQVKLRRPDLEVVEFRGNLQTRLKKLEDGVAEATFLAMAGLNRLKMDEVPKAA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML A+AQGAIGI +D + A L +++ T + + ERAFL TLDGSC
Sbjct: 195 VHTDDMLPAIAQGAIGIERRMDDTRAADMLAAIHDRATGEQLAAERAFLATLDGSC 250
>gi|154251802|ref|YP_001412626.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
gi|154155752|gb|ABS62969.1| porphobilinogen deaminase [Parvibaculum lavamentivorans DS-1]
Length = 308
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
EE L + ID+AVHSMKD+PT L + ++ C L+R
Sbjct: 69 EEQLADARIDVAVHSMKDMPTLLPEGLVIDCLLERADPRDAFLSSKANSLMSLPQGAVVG 128
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL+KL +GV ATL A+AGL +++ E VT
Sbjct: 129 TSSLRRAAQVRARRPDVTVVPFRGNVDTRLKKLADGVADATLLAMAGLTRMDLLECVTAP 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++L AVAQGAIGI + D + A L L+H ET V ERAFL LDGSC
Sbjct: 189 LSPEELLPAVAQGAIGIERRAADDEAAHLLEKLHHTETGLRVAAERAFLAVLDGSC 244
>gi|126733455|ref|ZP_01749202.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
gi|126716321|gb|EBA13185.1| porphobilinogen deaminase [Roseobacter sp. CCS2]
Length = 311
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 89/177 (50%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPT-----YLLDKTILP------------------------- 31
EEAL++G IDIAVHSMKD+P LLD T LP
Sbjct: 75 EEALLDGSIDIAVHSMKDMPVDQPGGLLLD-TYLPREDVRDAFVSLNASSLNDLAEGATV 133
Query: 32 --CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
+L+R GNVQ RL+KL +GV +AT A+AGL L+MT+
Sbjct: 134 GTSSLRRRSQLLAKRPDLNIVEFRGNVQTRLKKLGDGVAEATFLAMAGLNRLHMTDVPRT 193
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQGAIGI +D + A L +++ T + + ER+FL LDGSC
Sbjct: 194 AVAPEDMLPAVAQGAIGIERRGDDSRAAAMLDAIHDHATGRRLAAERSFLAALDGSC 250
>gi|254511195|ref|ZP_05123262.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
gi|221534906|gb|EEE37894.1| porphobilinogen deaminase [Rhodobacteraceae bacterium KLH11]
Length = 318
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHS KD+P +L L RE
Sbjct: 79 EEAMLKGEIDIAVHSTKDMPVAQPQGLVLDTFLPREDVRDAFISPGLNSIHDLPRGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV T A+AGL+ L M +
Sbjct: 139 TSSLRRRAQLLNRRPDLKVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLEMADVPATA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML A+AQGAIGI ++D + A L +++H ET Q + ER+ L LDGSC
Sbjct: 199 ISPDDMLPAIAQGAIGIERRNDDSRAAGMLAAIHHPETAQRLAAERSLLAGLDGSC 254
>gi|84500376|ref|ZP_00998625.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
gi|84391329|gb|EAQ03661.1| porphobilinogen deaminase [Oceanicola batsensis HTCC2597]
Length = 315
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ G IDIAVHSMKD+P + +L C L RE
Sbjct: 75 EHALLTGGIDIAVHSMKDMPVLQPEGLLLDCYLPREDPRDAFVSNLYERLDQIPAGARVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL +GV AT A+AGL L+ +
Sbjct: 135 TSSLRRRAQVLVRRPDLEVVEFRGNVQTRLRKLADGVASATFLAMAGLNRLDRASIARSA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ML AVAQGAIGI +D A L +++ ET + + ERAFL LDGSC
Sbjct: 195 LATDEMLPAVAQGAIGIERREDDHATAALLEAIHDPETARQLAAERAFLAALDGSC 250
>gi|84685204|ref|ZP_01013103.1| porphobilinogen deaminase [Maritimibacter alkaliphilus HTCC2654]
gi|84666936|gb|EAQ13407.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2654]
Length = 319
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 87/178 (48%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+NG ID+AVHSMKD+PT L C L RE
Sbjct: 79 EDQLLNGGIDLAVHSMKDMPTEQPPGLTLDCYLPREDTRDAFISLGGGGIHGLAEGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN- 73
GNVQ RL KL +GV +AT A+AG+ L M + V +
Sbjct: 139 TSSLRRKAQLLNRRPDLNVVEFRGNVQTRLTKLRDGVAEATFLAMAGITRLGMLDEVPHD 198
Query: 74 -ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I P +DML A+AQGAIGI S+D +A L +++H T + + ER+FL TLDGSC
Sbjct: 199 AIAP-EDMLPAIAQGAIGIERRSHDTNVADMLEAIHHGGTERRLAAERSFLATLDGSC 255
>gi|452821005|gb|EME28040.1| hydroxymethylbilane synthase [Galdieria sulphuraria]
Length = 378
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 83/174 (47%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
A + GEIDIAVHS+KDVPT+L +L L RE
Sbjct: 137 AQLRGEIDIAVHSLKDVPTWLPTGIVLGAVLPREDTRDVFLSYHSKDLSALPNGAVVGSS 196
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GN+Q RL+KL + + ATL ALAG+ L + + ++L
Sbjct: 197 SLRRQAQILAKYPHLQVLNFRGNLQTRLKKLEQRQVDATLLALAGMHRLGLEFSFAHVLS 256
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ML AVAQGAIG+ ND +++ L+ +R V CER+FL LDGSC
Sbjct: 257 FEEMLPAVAQGAIGVTIRENDHFSYRWISQLDDANSRICVECERSFLSALDGSC 310
>gi|254466587|ref|ZP_05079998.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
gi|206687495|gb|EDZ47977.1| porphobilinogen deaminase [Rhodobacterales bacterium Y4I]
Length = 323
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 87/176 (49%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP----------TYL-----LDKTILPC-------------- 32
EE L++G IDIAVHSMKD+P TYL D I P
Sbjct: 83 EEDLLSGAIDIAVHSMKDMPVAQPEGLALDTYLPREDVRDAFISPALKSLHDLAEGAVVG 142
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RLRKL+EGV T A+AGL L M + N
Sbjct: 143 TSSLRRRAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVADCTFLAMAGLNRLAMADVPANP 202
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DML AVAQGAIGI ++D + A+ L +++ ET + ERAFL LDGSC
Sbjct: 203 IETSDMLPAVAQGAIGIERRADDGRAAEMLAAIHDGETGLRLAAERAFLAALDGSC 258
>gi|126740632|ref|ZP_01756319.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
gi|126718433|gb|EBA15148.1| porphobilinogen deaminase [Roseobacter sp. SK209-2-6]
Length = 319
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++G IDIAVHSMKD+P + +L C L RE
Sbjct: 79 EEDLLSGAIDIAVHSMKDMPVLQPEGLLLDCYLPREDVRDAFVSPKFSRLQDLAAGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV + T A+AGL L M
Sbjct: 139 TSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLEDGVAECTFLAMAGLNRLAMESVPATA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DML AVAQGAIGI S+D ++A L +++ + T Q + ERAFL LDGSC
Sbjct: 199 IETTDMLPAVAQGAIGIERRSDDSRVAAMLEAIHDKATGQRLAAERAFLAALDGSC 254
>gi|117924047|ref|YP_864664.1| hydroxymethylbilane synthase [Magnetococcus marinus MC-1]
gi|117607803|gb|ABK43258.1| hydroxymethylbilane synthase [Magnetococcus marinus MC-1]
Length = 314
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G +D+AVHSMKDVP D +L L+RE
Sbjct: 68 EEAMLDGRVDLAVHSMKDVPAEFPDGLMLGPILKREDPRDALLSIHYQSLAELPQGALIG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R++KL EG A + A AG+K L +TE+V
Sbjct: 128 SSSLRRQSQIKAKRPDLRLDWLRGNVGTRIQKLVEGQFDAIILAAAGVKRLGLTEHVVQY 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ML AV QGA+GI +D ++A L L H+ET V ERAFL L+G C
Sbjct: 188 LEPEEMLPAVGQGAVGIEHRVDDARIATLLAPLYHKETHSCVTAERAFLAKLEGGC 243
>gi|359788646|ref|ZP_09291618.1| porphobilinogen deaminase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255573|gb|EHK58480.1| porphobilinogen deaminase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 309
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHS KD+ T L D L L RE
Sbjct: 69 EEALLSGRIDIAVHSSKDMATALPDGLELSAFLPREDPRDAFIGKTAPSIVELPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T+ A AGL+ L + T++
Sbjct: 129 SSSLRRQALILRMRPDLNVVMFRGNVQTRLRKLDEGVADGTILANAGLRRLGLEHVATHL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+ A QGAI I D++ A + +++H T QA+ CERAFL LDGSC
Sbjct: 189 MPLATFPPAPGQGAICIESRVADERAASLVAAIDHRPTAQALACERAFLAVLDGSC 244
>gi|86139102|ref|ZP_01057673.1| porphobilinogen deaminase [Roseobacter sp. MED193]
gi|85824333|gb|EAQ44537.1| porphobilinogen deaminase [Roseobacter sp. MED193]
Length = 319
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++G IDIAVHSMKD+P + +L C L RE
Sbjct: 79 EEDLLSGAIDIAVHSMKDMPVAQPEGLLLDCYLPREDVRDAFVSPKFSRLQDLEPGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KLNEGV + T A+AGL L M +
Sbjct: 139 TSSLRRRAQLMNRRPDLKVVEFRGNVQTRLKKLNEGVAECTFLAMAGLNRLAMADVPATA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQGAIGI +D + A L +++ T + + ERAFL LDGSC
Sbjct: 199 IETNDMLPAVAQGAIGIERRGDDSRTAAMLEAIHDVTTGKRLAAERAFLAALDGSC 254
>gi|389696174|ref|ZP_10183816.1| porphobilinogen deaminase [Microvirga sp. WSM3557]
gi|388584980|gb|EIM25275.1| porphobilinogen deaminase [Microvirga sp. WSM3557]
Length = 308
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 83/174 (47%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL++G ID+AVHS KD+PT L + ++ L RE
Sbjct: 72 ALLDGSIDLAVHSAKDLPTALPEGIVIAGFLPREDVRDAFISHRYRSLSDLPQGAVVGSA 131
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNVQ RL KL G + ATL A+AGL+ L +T++VT +L
Sbjct: 132 SLRRQAQVRRLRPDLQVTLLRGNVQTRLAKLERGEVDATLLAMAGLRRLGLTDHVTTVLE 191
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DD L AV QGAI IA + D+++ L + T A+ ERAFL LDGSC
Sbjct: 192 TDDFLPAVGQGAIAIAIRAEDERVRAALAPILDMATAHALAAERAFLTILDGSC 245
>gi|421070665|ref|ZP_15531795.1| Porphobilinogen deaminase [Pelosinus fermentans A11]
gi|392447985|gb|EIW25197.1| Porphobilinogen deaminase [Pelosinus fermentans A11]
Length = 277
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A++NG+ID+AVHS+KD+PT L + +L +R
Sbjct: 34 ETAMLNGQIDLAVHSLKDMPTELPEGLLLAAITERVDAGDAFISPNYGTVDKLPKGARVG 93
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL+KL G + A+AGLK L E +T +
Sbjct: 94 TSSLRRKAQLLKYRSDLKIGDLRGNLDTRLKKLENGEFDGIILAVAGLKRLGWQEKITQV 153
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+ I SND ++ K L LNH+ETR AV ERA+L ++G C
Sbjct: 154 LPQDICLPAVGQGALAIEARSNDAEVLKMLAFLNHQETRWAVEAERAYLAEVEGGC 209
>gi|392960346|ref|ZP_10325816.1| Porphobilinogen deaminase [Pelosinus fermentans DSM 17108]
gi|421054351|ref|ZP_15517320.1| porphobilinogen deaminase [Pelosinus fermentans B4]
gi|421058372|ref|ZP_15521077.1| Porphobilinogen deaminase [Pelosinus fermentans B3]
gi|421063443|ref|ZP_15525426.1| Porphobilinogen deaminase [Pelosinus fermentans A12]
gi|392441032|gb|EIW18686.1| porphobilinogen deaminase [Pelosinus fermentans B4]
gi|392455304|gb|EIW32102.1| Porphobilinogen deaminase [Pelosinus fermentans DSM 17108]
gi|392460949|gb|EIW37192.1| Porphobilinogen deaminase [Pelosinus fermentans B3]
gi|392462870|gb|EIW38887.1| Porphobilinogen deaminase [Pelosinus fermentans A12]
Length = 310
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A++NG+ID+AVHS+KD+PT L + +L +R
Sbjct: 67 ETAMLNGQIDLAVHSLKDMPTELPEGLLLAAITERVDAGDAFISPNYGTVDKLPKGARVG 126
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL+KL G + A+AGLK L E +T +
Sbjct: 127 TSSLRRKAQLLKYRSDLKIGDLRGNLDTRLKKLENGEFDGIILAVAGLKRLGWQEKITQV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+ I SND ++ K L LNH+ETR AV ERA+L ++G C
Sbjct: 187 LPQDICLPAVGQGALAIEARSNDAEVLKMLAFLNHQETRWAVEAERAYLAEVEGGC 242
>gi|114797250|ref|YP_761901.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
gi|123128354|sp|Q0BX92.1|HEM3_HYPNA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114737424|gb|ABI75549.1| porphobilinogen deaminase [Hyphomonas neptunium ATCC 15444]
Length = 321
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 89/177 (50%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
++AL GE+D+AVHS+KDVP+ L I LP
Sbjct: 75 DDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPEGATLG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV R+RKL EG+ AT A+AGL L ++E T I
Sbjct: 135 TASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSEVATPI 194
Query: 75 LPIDDMLLAVAQGAIGIACTSN-DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P++DML A QG IG+ + D ++ + LG L+HE +R A + ERAFL LDGSC
Sbjct: 195 -PLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDGSC 250
>gi|255262497|ref|ZP_05341839.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
gi|255104832|gb|EET47506.1| porphobilinogen deaminase [Thalassiobium sp. R2A62]
Length = 316
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++G IDIAVHSMKD+PT D +L L RE
Sbjct: 75 EQAMLDGSIDIAVHSMKDMPTLQPDGLLLDTYLPREDVRDAFIALDGGTLADLPDGGVVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RLRKL + V AT A+AGL L M +
Sbjct: 135 TSSLRRQAQLRLRRPDLQVVEFRGNLQTRLRKLGDKVADATFLAMAGLNRLKMDDVTRTP 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +++ML AVAQGAIGI +ND + A L +++ T Q + ERAFL LDGSC
Sbjct: 195 IEVEEMLPAVAQGAIGIERRANDLRAADMLAAIHDRLTGQRLSAERAFLQALDGSC 250
>gi|39998374|ref|NP_954325.1| porphobilinogen deaminase [Geobacter sulfurreducens PCA]
gi|409913726|ref|YP_006892191.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400]
gi|55976461|sp|Q747I1.1|HEM3_GEOSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|39985320|gb|AAR36675.1| hydroxymethylbilane synthase [Geobacter sulfurreducens PCA]
gi|298507314|gb|ADI86037.1| hydroxymethylbilane synthase [Geobacter sulfurreducens KN400]
Length = 318
Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 82/175 (46%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISNGVTFANLPQGAKIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+RKL E + A + A AGLK L T+ VT L
Sbjct: 127 SALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLGFTDVVTEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P+D L A+ QGA+G+ C +D+ + + + NH +T AV ERA L +G C
Sbjct: 187 PVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRCEGGC 241
>gi|393767512|ref|ZP_10356058.1| porphobilinogen deaminase [Methylobacterium sp. GXF4]
gi|392726775|gb|EIZ84094.1| porphobilinogen deaminase [Methylobacterium sp. GXF4]
Length = 307
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + E+D+AVHSMKDV T+L D + C L+R+
Sbjct: 67 EQALFSDEVDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSPHADGLAGLPEGARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN R+RKL G ATL ALAGL+ L + + +I
Sbjct: 127 TSSLRRGAQVLMHRPDLKVVPLRGNANTRMRKLESGECDATLLALAGLQRLGLQDMARSI 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGA+GI C ++D + L + T A+ ERA L LDGSC
Sbjct: 187 LSVDEMLPAVAQGALGIECRADDAAIRDLLAPIACARTTTAIAAERALLAELDGSC 242
>gi|190893753|ref|YP_001980295.1| porphobilinogen deaminase [Rhizobium etli CIAT 652]
gi|190699032|gb|ACE93117.1| porphobilinogen deaminase protein [Rhizobium etli CIAT 652]
Length = 309
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++GE+D AVHS KD+PT+L D L L RE
Sbjct: 69 EQKLVSGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G+V+ RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVIIFRGSVETRLRKLEEGQVDATLLALAGLKRLGKVEVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D ++ L ++N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDSRIDDLLAAVNDAATFDTVSCERAFLAALDGSC 244
>gi|170749246|ref|YP_001755506.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
gi|170655768|gb|ACB24823.1| porphobilinogen deaminase [Methylobacterium radiotolerans JCM 2831]
Length = 307
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL GE+D+AVHSMKDV T+L D + C L+R+
Sbjct: 67 EQALFAGEVDVAVHSMKDVETWLPDGLTIACILERDDPRDAFLSPHADGLAGLAAGARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN R+RKL G ATL ALAGL+ L + ++
Sbjct: 127 TSSLRRGAQVLMRRPDLRVVPLRGNANTRMRKLEAGECDATLLALAGLQRLGLESMARSV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ML AVAQGA+GI C ++D + L + E T AV ERA L LDGSC
Sbjct: 187 LSVEEMLPAVAQGALGIECRADDAVIRDLLAPIACERTTVAVSAERALLAELDGSC 242
>gi|357024709|ref|ZP_09086851.1| porphobilinogen deaminase [Mesorhizobium amorphae CCNWGS0123]
gi|355543377|gb|EHH12511.1| porphobilinogen deaminase [Mesorhizobium amorphae CCNWGS0123]
Length = 308
Score = 98.2 bits (243), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ IDIAVHS KD+PT L + L L RE
Sbjct: 68 EEALLARRIDIAVHSSKDMPTLLPEGLELSAFLPREDARDAFVGKAAKRIADLPQGAKVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T+ A AGLK L + VT++
Sbjct: 128 SSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVADGTILAYAGLKRLGLEHVVTDL 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D A QGAI I D+ + K L +++ T QA+ CERAFL LDGSC
Sbjct: 188 MPLDIFRPAPGQGAICIESRIGDRDVEKMLMAIHDVPTGQALACERAFLAALDGSC 243
>gi|384921766|ref|ZP_10021727.1| porphobilinogen deaminase [Citreicella sp. 357]
gi|384464181|gb|EIE48765.1| porphobilinogen deaminase [Citreicella sp. 357]
Length = 322
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 84/178 (47%), Gaps = 49/178 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++G IDIAVHSMKD+PT +L C L RE
Sbjct: 79 EEQLLSGGIDIAVHSMKDMPTEQPAGLLLDCYLPREDVRDAFIAPGAAGLADLAPGTVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KL++GV AT A+AGL + MT +
Sbjct: 139 TSSLRRRAQLLNRRPDLRVVEFRGNLQTRLKKLHDGVAAATFLAMAGLGRMGMTGGDVPM 198
Query: 75 LPID--DMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P+ DML AVAQGAIGI ND A L +++H T + ER+FL TLDGSC
Sbjct: 199 TPMSPGDMLPAVAQGAIGIERRINDDCTATLLAAIHHAPTALRLSAERSFLATLDGSC 256
>gi|163797975|ref|ZP_02191917.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
gi|159176769|gb|EDP61340.1| Porphobilinogen deaminase [alpha proteobacterium BAL199]
Length = 321
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 84/181 (46%), Gaps = 52/181 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ G+ID AVHSMKD+ T + ++L L RE
Sbjct: 78 EQALMAGQIDAAVHSMKDMETTIAPASVLVAVLPREDPRDAWLSPIADRVDDLPSGAKIG 137
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL EG + T A AGL L M + T I
Sbjct: 138 TASVRRAAQVLNRRPDLQVVLFRGNVDTRLRKLAEGEVAGTFLAAAGLSRLGMLDKATRI 197
Query: 75 LPIDDMLLAVAQGAIGIAC-----TSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
L +D+ML AV+QGAIG+ C ++ D ++ +L L+ +R V ERA L TLDGS
Sbjct: 198 LEVDEMLPAVSQGAIGVQCRDGEASARDAEIRNWLSILDDRPSRLRVTAERAMLATLDGS 257
Query: 130 C 130
C
Sbjct: 258 C 258
>gi|339504981|ref|YP_004692401.1| porphobilinogen deaminase [Roseobacter litoralis Och 149]
gi|338758974|gb|AEI95438.1| porphobilinogen deaminase HemC [Roseobacter litoralis Och 149]
Length = 314
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++ +IDIAVHSMKD+PT D +L L RE
Sbjct: 75 EEDLLSEKIDIAVHSMKDMPTLQPDGLVLDTYLPREDVRDAFVSPTLSGIADLAQGAVVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV + T A AGL L M E
Sbjct: 135 TSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLASAGLNRLKMDEVPATP 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ML AVAQGAIGI D+ A L +++H ET Q + ER+FL TLDGSC
Sbjct: 195 IEADEMLPAVAQGAIGIERRMADQNTADLLSAIHHIETGQRLTAERSFLLTLDGSC 250
>gi|340029187|ref|ZP_08665250.1| porphobilinogen deaminase [Paracoccus sp. TRP]
Length = 303
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++ +IDIAVHSMKD+PT D ++ C L RE
Sbjct: 64 EDALLSHQIDIAVHSMKDMPTIQPDGLVIDCYLPREDVRDAFVSSSFAGISDLPQGAVVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL EGV AT A+AGL L M
Sbjct: 124 SSSLRRRAQLAARRPDLQLVEFRGNVQTRLKKLEEGVAVATFLAMAGLSRLGMLHVARGA 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ML AVAQG IG+ ++D + A L +++ ++ V ERAFL LDGSC
Sbjct: 184 VEPDEMLPAVAQGCIGVERRADDAQTAALLAAISDRDSTLRVTAERAFLARLDGSC 239
>gi|398827886|ref|ZP_10586089.1| porphobilinogen deaminase [Phyllobacterium sp. YR531]
gi|398219184|gb|EJN05681.1| porphobilinogen deaminase [Phyllobacterium sp. YR531]
Length = 309
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L +G ID+AVHS KD+PT+L + L L+RE
Sbjct: 69 EEQLADGRIDLAVHSSKDMPTFLPEGLHLSVFLEREDPRDAFIGREVKTLTDLPLGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + AT A AGLK L++ VT +
Sbjct: 129 SASLRRQALIKRVRPDLEVVNFRGNVQTRLRKLAEGDVDATFLAFAGLKRLDLGHVVTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A QGAI + D ++ L +NH T A+ CERAFL TLDGSC
Sbjct: 189 MDAKAFPPAPGQGAITVESRIGDDRIDNLLAPINHLPTSTALACERAFLATLDGSC 244
>gi|118592006|ref|ZP_01549400.1| porphobilinogen deaminase [Stappia aggregata IAM 12614]
gi|118435302|gb|EAV41949.1| porphobilinogen deaminase [Labrenzia aggregata IAM 12614]
Length = 303
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G ID+AVHS KD+PT L D L L RE
Sbjct: 64 EEALLDGRIDLAVHSSKDMPTVLPDGLALTAFLPREDVRDAFLSPKAKTLTDLPHGAVVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RLRKL EG + ATL A AGL+ L + +T++
Sbjct: 124 SSSLRRQAMIKRLRPDIEVVMYRGNLQTRLRKLAEGAVDATLLAAAGLRRLGLEAEITSL 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGAI I ++D + L +++ E T+ + ERAFL LDGSC
Sbjct: 184 LETDQFLPAVGQGAICIESRADDTATLEMLAAIHDEATQIRLDAERAFLAVLDGSC 239
>gi|306844857|ref|ZP_07477440.1| porphobilinogen deaminase [Brucella inopinata BO1]
gi|306274789|gb|EFM56570.1| porphobilinogen deaminase [Brucella inopinata BO1]
Length = 314
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG+LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGSLDGSC 249
>gi|398377074|ref|ZP_10535253.1| porphobilinogen deaminase [Rhizobium sp. AP16]
gi|397727275|gb|EJK87702.1| porphobilinogen deaminase [Rhizobium sp. AP16]
Length = 309
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L +GE+D AVHS KD+ T L + L L RE
Sbjct: 69 EEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIELPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G+VQ RLRKL EG ATL A+AGLK L + +T+I
Sbjct: 129 SASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLGKVDVITDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ A AQGAIGI DK+M L ++N T V CER FL LDGSC
Sbjct: 189 LDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSSTFDIVSCERGFLAALDGSC 244
>gi|169831506|ref|YP_001717488.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
gi|238058920|sp|B1I4L8.1|HEM3_DESAP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169638350|gb|ACA59856.1| porphobilinogen deaminase [Candidatus Desulforudis audaxviator
MP104C]
Length = 309
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 90/176 (51%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LPC----- 32
E+AL++ EID+AVHSMKD+PT L + + LP
Sbjct: 66 EQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEELPAGAVLG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RLRKL+EGV+ A + A AGL L +TE VT+
Sbjct: 126 TSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGLTERVTHR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+ L AV QGA+GI ++D ++ + L +++H TR AV ER L L+G C
Sbjct: 186 IPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLEGGC 241
>gi|110635531|ref|YP_675739.1| porphobilinogen deaminase [Chelativorans sp. BNC1]
gi|110286515|gb|ABG64574.1| hydroxymethylbilane synthase [Chelativorans sp. BNC1]
Length = 309
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G ID+AVHS KD+PT+L D L L+RE
Sbjct: 69 EEALLEGRIDLAVHSSKDMPTFLPDGLELSAFLEREDVRDVFIGRAAKRLEDLPHGANLG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL +G TL ALAGLK L + T +
Sbjct: 129 TSSLRRQALALRLRPDLKVGVFRGNVQTRLRKLEDGAADGTLLALAGLKRLKLEHVATEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A+ QGAI I + D ++AK + +++H T A+ CERAFL LDGSC
Sbjct: 189 MDPVIFPPALGQGAICIESRTGDTRIAKLVEAIHHPATGFALSCERAFLAALDGSC 244
>gi|89069761|ref|ZP_01157097.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
gi|89044707|gb|EAR50818.1| porphobilinogen deaminase [Oceanicola granulosus HTCC2516]
Length = 313
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G IDIAVHSMKD+P + +L C L RE
Sbjct: 74 EEAMLSGAIDIAVHSMKDMPVAQPEGLVLDCYLPREDPRDAFVSLLHAGIKALPDGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL GV AT A+AGL L +
Sbjct: 134 TSSLRRKAQLLHRRPDLHVVEFRGNVQTRLRKLESGVAVATFLAVAGLNRLGADDVPQAP 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQGAIGI ++D+ + + L +++ T + + ERAFL LDGSC
Sbjct: 194 IAPEDMLPAVAQGAIGIERRASDEGLGEMLAAIHDRATGERLAAERAFLAALDGSC 249
>gi|222087476|ref|YP_002546013.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
gi|221724924|gb|ACM28080.1| porphobilinogen deaminase [Agrobacterium radiobacter K84]
Length = 322
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L +GE+D AVHS KD+ T L + L L RE
Sbjct: 82 EEKLTSGELDFAVHSAKDMATKLPEGLALTAYLPREDIRDSVIGRTAPKLIELPHGATVG 141
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G+VQ RLRKL EG ATL A+AGLK L + +T+I
Sbjct: 142 SASLRRQALIRRLRPDINVITFRGSVQTRLRKLEEGQADATLLAVAGLKRLGKVDVITDI 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ A AQGAIGI DK+M L ++N T V CER FL LDGSC
Sbjct: 202 LDPDEFPPAPAQGAIGIESRIGDKRMNDLLAAINDSPTFDIVSCERGFLAALDGSC 257
>gi|400755638|ref|YP_006564006.1| porphobilinogen deaminase HemC [Phaeobacter gallaeciensis 2.10]
gi|398654791|gb|AFO88761.1| porphobilinogen deaminase HemC [Phaeobacter gallaeciensis 2.10]
Length = 320
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
EE L++G IDIAVHSMKD+P LL T LP
Sbjct: 80 EEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITDLRAGAVVG 139
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL KL +GV + T A+AGL L +
Sbjct: 140 TSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLGADQVPATP 199
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P +DML AVAQGAIGI ++D + L +L+ ET + + ERAFL LDGSC
Sbjct: 200 IPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAALDGSC 255
>gi|399994129|ref|YP_006574369.1| porphobilinogen deaminase HemC [Phaeobacter gallaeciensis DSM 17395
= CIP 105210]
gi|398658684|gb|AFO92650.1| porphobilinogen deaminase HemC [Phaeobacter gallaeciensis DSM 17395
= CIP 105210]
Length = 320
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
EE L++G IDIAVHSMKD+P LL T LP
Sbjct: 80 EEDLLSGAIDIAVHSMKDMPVAQPAGLLLDTYLPREDVRDAFVSPDVTAITDLRAGAVVG 139
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL KL +GV + T A+AGL L +
Sbjct: 140 TSSLRRRAQLLHRRPDLQVVEFRGNVQTRLTKLRDGVAECTFLAMAGLNRLGADQVPATP 199
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P +DML AVAQGAIGI ++D + L +L+ ET + + ERAFL LDGSC
Sbjct: 200 IPPEDMLPAVAQGAIGIERRADDSRTGDMLAALHDRETGERLAAERAFLAALDGSC 255
>gi|159045244|ref|YP_001534038.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
gi|157913004|gb|ABV94437.1| porphobilinogen deaminase [Dinoroseobacter shibae DFL 12]
Length = 347
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP----------TYLLDKTI--------------LP------ 31
E+A+++G IDIAVHSMKD+P TYL + + LP
Sbjct: 104 EDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEGAVVG 163
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ R++KL +GV AT A+AGL L M E +
Sbjct: 164 SSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEVPRSA 223
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQG IGI ++D + A+ L +++ + + CERA+L LDGSC
Sbjct: 224 IAPEDMLPAVAQGCIGIERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSC 279
>gi|306842959|ref|ZP_07475593.1| porphobilinogen deaminase [Brucella sp. BO2]
gi|306286887|gb|EFM58412.1| porphobilinogen deaminase [Brucella sp. BO2]
Length = 314
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSC 249
>gi|420244051|ref|ZP_14747891.1| porphobilinogen deaminase [Rhizobium sp. CF080]
gi|398056199|gb|EJL48213.1| porphobilinogen deaminase [Rhizobium sp. CF080]
Length = 309
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE LI+G++D AVHS KD+PT L D L L RE
Sbjct: 69 EEGLISGDLDFAVHSSKDMPTKLPDGLRLAAYLPREDFRDAFIGRTAHTLAALPDGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKLNEG + ATL A AGLK L + VT +
Sbjct: 129 SSSLRRQALIRRIRPDINVITFRGLVETRLRKLNEGQVDATLLAYAGLKRLGKQDAVTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI + +D ++ L +N T AV CERAFL LDGSC
Sbjct: 189 LDPADFPPAPAQGAICVESRVSDARIDALLDPINDRPTYDAVSCERAFLAALDGSC 244
>gi|227823724|ref|YP_002827697.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
gi|227342726|gb|ACP26944.1| porphobilinogen deaminase [Sinorhizobium fredii NGR234]
Length = 309
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+PT L D L L RE
Sbjct: 69 EQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFVGRTAPRLVELPEGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGLK L MT+ T +
Sbjct: 129 SSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLGMTDVPTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D ++ L +++ T +AV CER FL TLDGSC
Sbjct: 189 LDPKEFPPAPAQGAICIESRDGDDRVNALLAAIDDPRTHEAVACERGFLATLDGSC 244
>gi|62290744|ref|YP_222537.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82700655|ref|YP_415229.1| porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189024957|ref|YP_001935725.1| porphobilinogen deaminase [Brucella abortus S19]
gi|225853324|ref|YP_002733557.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|256263189|ref|ZP_05465721.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|260546007|ref|ZP_05821747.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260562805|ref|ZP_05833291.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260755568|ref|ZP_05867916.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260758791|ref|ZP_05871139.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260760515|ref|ZP_05872858.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260884592|ref|ZP_05896206.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|261214839|ref|ZP_05929120.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|265991918|ref|ZP_06104475.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|265993649|ref|ZP_06106206.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|297247130|ref|ZP_06930848.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|384212236|ref|YP_005601320.1| porphobilinogen deaminase [Brucella melitensis M5-90]
gi|23821695|sp|Q8YJB0.2|HEM3_BRUME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|75496218|sp|Q57B08.1|HEM3_BRUAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123768401|sp|Q2YLM5.1|HEM3_BRUA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238058730|sp|B2S842.1|HEM3_BRUA1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800235|sp|C0RFD1.1|HEM3_BRUMB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|62196876|gb|AAX75176.1| HemC, porphobilinogen deaminase [Brucella abortus bv. 1 str. 9-941]
gi|82616756|emb|CAJ11843.1| Porphobilinogen deaminase [Brucella melitensis biovar Abortus 2308]
gi|189020529|gb|ACD73251.1| Porphobilinogen deaminase [Brucella abortus S19]
gi|225641689|gb|ACO01603.1| porphobilinogen deaminase [Brucella melitensis ATCC 23457]
gi|260096114|gb|EEW79990.1| porphobilinogen deaminase [Brucella abortus NCTC 8038]
gi|260152821|gb|EEW87913.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|260669109|gb|EEX56049.1| porphobilinogen deaminase [Brucella abortus bv. 4 str. 292]
gi|260670947|gb|EEX57768.1| porphobilinogen deaminase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675676|gb|EEX62497.1| porphobilinogen deaminase [Brucella abortus bv. 6 str. 870]
gi|260874120|gb|EEX81189.1| porphobilinogen deaminase [Brucella abortus bv. 9 str. C68]
gi|260916446|gb|EEX83307.1| porphobilinogen deaminase [Brucella abortus bv. 3 str. Tulya]
gi|262764630|gb|EEZ10551.1| porphobilinogen deaminase [Brucella melitensis bv. 3 str. Ether]
gi|263002984|gb|EEZ15277.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093111|gb|EEZ17246.1| porphobilinogen deaminase [Brucella melitensis bv. 2 str. 63/9]
gi|297174299|gb|EFH33646.1| porphobilinogen deaminase [Brucella abortus bv. 5 str. B3196]
gi|326539601|gb|ADZ87816.1| porphobilinogen deaminase [Brucella melitensis M5-90]
Length = 314
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>gi|376272394|ref|YP_005150972.1| porphobilinogen deaminase [Brucella abortus A13334]
gi|384409340|ref|YP_005597961.1| Porphobilinogen deaminase [Brucella melitensis M28]
gi|326409887|gb|ADZ66952.1| Porphobilinogen deaminase [Brucella melitensis M28]
gi|363399999|gb|AEW16969.1| porphobilinogen deaminase [Brucella abortus A13334]
Length = 277
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 37 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 96
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 97 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 156
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 157 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 212
>gi|429206200|ref|ZP_19197468.1| Porphobilinogen deaminase [Rhodobacter sp. AKP1]
gi|428190921|gb|EKX59465.1| Porphobilinogen deaminase [Rhodobacter sp. AKP1]
Length = 310
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + IL L RE
Sbjct: 71 EEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQGATVG 130
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KLN+GV + T A+AGL L M E
Sbjct: 131 SSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDEVPRVP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AVAQGAIGI ++D + + L +++ T + ER+FL LDGSC
Sbjct: 191 IEPEDMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 246
>gi|378827819|ref|YP_005190551.1| protein HemC [Sinorhizobium fredii HH103]
gi|365180871|emb|CCE97726.1| hemC [Sinorhizobium fredii HH103]
Length = 309
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++GE+D AVHS KD+PT L D L L RE
Sbjct: 69 EQQLLSGELDFAVHSSKDMPTNLPDGLFLSAFLPREDIRDAFVGRTAPRLVELPEGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGLK L MT T +
Sbjct: 129 SSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAFAGLKRLGMTAVPTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D+++ L +++ T +AV CER FL TLDGSC
Sbjct: 189 LDPKEFPPAPAQGAICIESRVGDERVNALLAAIDDPRTHEAVACERGFLATLDGSC 244
>gi|421074720|ref|ZP_15535746.1| Porphobilinogen deaminase [Pelosinus fermentans JBW45]
gi|392527206|gb|EIW50306.1| Porphobilinogen deaminase [Pelosinus fermentans JBW45]
Length = 310
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A++NG+ID+AVHS+KD+PT L + +L +R
Sbjct: 67 ETAMLNGQIDLAVHSLKDMPTELPEGLLLAAITERVDPGDAFISPNYGTVDNLPKGARVG 126
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL+KL G + A+AGLK L E +T +
Sbjct: 127 TSSLRRKAQLLKYRSDLKIGDLRGNLDTRLKKLENGEFDGIILAVAGLKRLGWQEKITQV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+ I SND ++ + L LNH+ETR +V ERA+L ++G C
Sbjct: 187 LPQDICLPAVGQGALAIEARSNDAEVLQMLAFLNHQETRWSVEAERAYLAEVEGGC 242
>gi|265982897|ref|ZP_06095632.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306838958|ref|ZP_07471782.1| porphobilinogen deaminase [Brucella sp. NF 2653]
gi|264661489|gb|EEZ31750.1| porphobilinogen deaminase [Brucella sp. 83/13]
gi|306405961|gb|EFM62216.1| porphobilinogen deaminase [Brucella sp. NF 2653]
Length = 314
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGAIVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVGGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDALLAPLAHRETQIALACERAFLGALDGSC 249
>gi|261751035|ref|ZP_05994744.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
gi|261740788|gb|EEY28714.1| porphobilinogen deaminase [Brucella suis bv. 5 str. 513]
Length = 314
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>gi|384445881|ref|YP_005604600.1| porphobilinogen deaminase [Brucella melitensis NI]
gi|423168135|ref|ZP_17154838.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI435a]
gi|423169489|ref|ZP_17156164.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI474]
gi|423175521|ref|ZP_17162190.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI486]
gi|423177629|ref|ZP_17164274.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI488]
gi|423178922|ref|ZP_17165563.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI010]
gi|423182053|ref|ZP_17168690.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI016]
gi|423187005|ref|ZP_17173619.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI021]
gi|423190559|ref|ZP_17177167.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI259]
gi|349743870|gb|AEQ09413.1| porphobilinogen deaminase [Brucella melitensis NI]
gi|374535965|gb|EHR07486.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI486]
gi|374539884|gb|EHR11387.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI435a]
gi|374543168|gb|EHR14651.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI474]
gi|374549217|gb|EHR20661.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI488]
gi|374551866|gb|EHR23295.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI016]
gi|374552238|gb|EHR23666.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI010]
gi|374554329|gb|EHR25740.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI259]
gi|374557717|gb|EHR29113.1| porphobilinogen deaminase [Brucella abortus bv. 1 str. NI021]
Length = 328
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 88 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 147
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 148 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 208 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 263
>gi|449015947|dbj|BAM79349.1| porphobilinogen deaminase [Cyanidioschyzon merolae strain 10D]
Length = 417
Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EA + G+IDIAVHSMKDVPT+L L L+RE
Sbjct: 152 DEAQLRGDIDIAVHSMKDVPTFLPPDIELTSILRREDTRDAFVSFKAKSLDELPPGSVVG 211
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL E V+ ATL ALAGL+ L M T +
Sbjct: 212 SSSLRRQSQILARYPHLKVINFRGNVQTRLRKLEECVVDATLLALAGLRRLQMEHVATAV 271
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++DML AVAQGAIGI D + A LG L+ T+ V ERAFL LDGSC
Sbjct: 272 LGMEDMLPAVAQGAIGITTRRGDDRTAALLGPLSCPRTKLCVEAERAFLANLDGSC 327
>gi|294851125|ref|ZP_06791798.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
gi|294819714|gb|EFG36713.1| porphobilinogen deaminase [Brucella sp. NVSL 07-0026]
Length = 314
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>gi|261217716|ref|ZP_05931997.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261321437|ref|ZP_05960634.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
gi|260922805|gb|EEX89373.1| porphobilinogen deaminase [Brucella ceti M13/05/1]
gi|261294127|gb|EEX97623.1| porphobilinogen deaminase [Brucella ceti M644/93/1]
Length = 314
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>gi|148559606|ref|YP_001259712.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
gi|166201494|sp|A5VSL5.1|HEM3_BRUO2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148370863|gb|ABQ60842.1| porphobilinogen deaminase [Brucella ovis ATCC 25840]
Length = 304
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 64 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 124 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 184 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 239
>gi|23502739|ref|NP_698866.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161619804|ref|YP_001593691.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163843911|ref|YP_001628315.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|256370288|ref|YP_003107799.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260567624|ref|ZP_05838094.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|261220941|ref|ZP_05935222.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261315070|ref|ZP_05954267.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261316373|ref|ZP_05955570.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261323834|ref|ZP_05963031.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261755596|ref|ZP_05999305.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|261758828|ref|ZP_06002537.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|265987445|ref|ZP_06100002.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|265996901|ref|ZP_06109458.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|340791477|ref|YP_004756942.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|376281534|ref|YP_005155540.1| porphobilinogen deaminase [Brucella suis VBI22]
gi|384225526|ref|YP_005616690.1| porphobilinogen deaminase [Brucella suis 1330]
gi|38258150|sp|Q8FYI6.1|HEM3_BRUSU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042875|sp|A9M8M2.1|HEM3_BRUC2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189042876|sp|B0CID9.1|HEM3_BRUSI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|23348756|gb|AAN30781.1| porphobilinogen deaminase [Brucella suis 1330]
gi|161336615|gb|ABX62920.1| porphobilinogen deaminase [Brucella canis ATCC 23365]
gi|163674634|gb|ABY38745.1| porphobilinogen deaminase [Brucella suis ATCC 23445]
gi|256000451|gb|ACU48850.1| porphobilinogen deaminase [Brucella microti CCM 4915]
gi|260157142|gb|EEW92222.1| porphobilinogen deaminase [Brucella suis bv. 4 str. 40]
gi|260919525|gb|EEX86178.1| porphobilinogen deaminase [Brucella ceti B1/94]
gi|261295596|gb|EEX99092.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|261299814|gb|EEY03311.1| porphobilinogen deaminase [Brucella neotomae 5K33]
gi|261304096|gb|EEY07593.1| porphobilinogen deaminase [Brucella pinnipedialis M163/99/10]
gi|261738812|gb|EEY26808.1| porphobilinogen deaminase [Brucella sp. F5/99]
gi|261745349|gb|EEY33275.1| porphobilinogen deaminase [Brucella suis bv. 3 str. 686]
gi|262551369|gb|EEZ07359.1| porphobilinogen deaminase [Brucella ceti M490/95/1]
gi|264659642|gb|EEZ29903.1| porphobilinogen deaminase [Brucella pinnipedialis M292/94/1]
gi|340559936|gb|AEK55174.1| porphobilinogen deaminase [Brucella pinnipedialis B2/94]
gi|343383706|gb|AEM19198.1| porphobilinogen deaminase [Brucella suis 1330]
gi|358259133|gb|AEU06868.1| porphobilinogen deaminase [Brucella suis VBI22]
Length = 314
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>gi|17986460|ref|NP_539094.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237816250|ref|ZP_04595243.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
gi|17982057|gb|AAL51358.1| porphobilinogen deaminase [Brucella melitensis bv. 1 str. 16M]
gi|237788317|gb|EEP62532.1| porphobilinogen deaminase [Brucella abortus str. 2308 A]
Length = 342
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 102 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 161
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 162 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 221
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 222 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 277
>gi|376275520|ref|YP_005115959.1| porphobilinogen deaminase [Brucella canis HSK A52141]
gi|363404086|gb|AEW14381.1| porphobilinogen deaminase [Brucella canis HSK A52141]
Length = 277
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 37 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 96
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 97 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 156
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 157 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 212
>gi|261405370|ref|YP_003241611.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|329928511|ref|ZP_08282379.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
gi|261281833|gb|ACX63804.1| porphobilinogen deaminase [Paenibacillus sp. Y412MC10]
gi|328937770|gb|EGG34178.1| hydroxymethylbilane synthase [Paenibacillus sp. HGF5]
Length = 318
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A+I+GEID+AVHSMKD+P+ L + + LP
Sbjct: 69 EQAMIDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGTTLDDLPQGAKVG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +R+RK+ EG QA + A AGL+ + + +T+
Sbjct: 129 TSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIILATAGLQRMGWEDRITSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L AV QGA+GI C ND+++ L N E T + V ER FL L+G C
Sbjct: 189 LPVEVSLPAVGQGALGIECRENDEELLHLLSLYNDEVTARTVAAERKFLSELNGGC 244
>gi|407799138|ref|ZP_11146032.1| porphobilinogen deaminase [Oceaniovalibus guishaninsula JLT2003]
gi|407058780|gb|EKE44722.1| porphobilinogen deaminase [Oceaniovalibus guishaninsula JLT2003]
Length = 313
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 85/177 (48%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+P D +L L RE
Sbjct: 73 EEALLSGGIDIAVHSMKDMPVDQPDGLLLDTYLPREDVRDAFISVNGDAGLDALAEGAVV 132
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ R+RKL +GV AT A+AGL L M + +
Sbjct: 133 GTSSLRRKAQLLHRRPDLDVVEFRGNVQTRMRKLEDGVAGATFLAMAGLNRLGM-DIPRS 191
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + ML A+AQGAIGI ++D ++A L +++ T Q + ERAFL LDGSC
Sbjct: 192 AIPPETMLPAIAQGAIGIERRADDIRVAGMLEAIHDAATGQRLAAERAFLAALDGSC 248
>gi|254488942|ref|ZP_05102147.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
gi|214045811|gb|EEB86449.1| porphobilinogen deaminase [Roseobacter sp. GAI101]
Length = 297
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 88/178 (49%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
EE L+ G+IDIAVHSMKD+PT LL T LP
Sbjct: 53 EEDLLAGKIDIAVHSMKDMPTVQPGGLLLDTYLPREDPRDAFVAPLMSALDQLTEGAVVG 112
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RLRKL +GV + T A+AGL L M ENV
Sbjct: 113 TSSLRRRAQLLHKRPDLQVVEFRGNVQTRLRKLADGVAECTFLAMAGLNRLGM-ENVPAT 171
Query: 75 LPIDD--MLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
PIDD ML AVAQGAIGI + D L +++ T Q ++ ERAFL TLDGSC
Sbjct: 172 -PIDDTDMLPAVAQGAIGIERRAGDLDTEALLAAIHDTPTGQRLIAERAFLLTLDGSC 228
>gi|346995487|ref|ZP_08863559.1| porphobilinogen deaminase [Ruegeria sp. TW15]
Length = 318
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHS KD+P D L L RE
Sbjct: 79 EEAMLKGEIDIAVHSTKDMPVEQPDGLALDTFLPREDVRDAFISPSLSSIHELPEGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV T A+AGL+ L+M +
Sbjct: 139 TSSLRRRAQLLNRRPDLNVVEFRGNVQTRLKKLADGVADCTFLAMAGLRRLDMKDVPATA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DML A+AQG IGI S+D A+ L +++H ET Q + ER+ L LDGSC
Sbjct: 199 ISTVDMLPAIAQGTIGIERRSDDTLAAEMLAAIHHVETSQRLAAERSLLAGLDGSC 254
>gi|119386338|ref|YP_917393.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
gi|166217779|sp|A1B853.1|HEM3_PARDP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119376933|gb|ABL71697.1| porphobilinogen deaminase [Paracoccus denitrificans PD1222]
Length = 313
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ EIDIAVHSMKD+PT + ++ C L RE
Sbjct: 74 EDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELPQGAVVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV AT A+AGL L M
Sbjct: 134 SSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGMLHVARGA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ML AVAQG IG+ ++D + A L +++ ++ V ERAFL LDGSC
Sbjct: 194 VEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDGSC 249
>gi|225628089|ref|ZP_03786124.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
gi|225616914|gb|EEH13961.1| porphobilinogen deaminase [Brucella ceti str. Cudo]
Length = 342
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 102 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 161
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 162 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 221
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 222 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 277
>gi|58617102|ref|YP_196301.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
gi|58416714|emb|CAI27827.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Gardel]
Length = 299
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
EEAL+ G ID+AVHSMKDVP + D ++PC L+R
Sbjct: 67 EEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRSLPDNAVIG 126
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+ KL G + A AGL +N T + +
Sbjct: 127 TSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRINKTHVIKEV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ML AV QGAIGI C +ND KM + LN +++ +V ER+F+ T++GSC
Sbjct: 187 LDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTVNGSC 242
>gi|57239097|ref|YP_180233.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58579044|ref|YP_197256.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|57161176|emb|CAH58090.1| porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
gi|58417670|emb|CAI26874.1| Porphobilinogen deaminase [Ehrlichia ruminantium str. Welgevonden]
Length = 299
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
EEAL+ G ID+AVHSMKDVP + D ++PC L+R
Sbjct: 67 EEALLTGTIDLAVHSMKDVPAFYCDSLVIPCILKRSSPYDVFISSKYQSLRSLPDNAVIG 126
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+ KL G + A AGL +N T + +
Sbjct: 127 TSSIRRKVQLMRLLSSVQVVPIRGNVDTRILKLEAGQYDGIILAKAGLMRINKTHVIKEV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ML AV QGAIGI C +ND KM + LN +++ +V ER+F+ T++GSC
Sbjct: 187 LDPQVMLSAVGQGAIGIQCRANDYKMIDMIKILNCKKSYISVAAERSFMKTVNGSC 242
>gi|56964395|ref|YP_176126.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
gi|61213279|sp|Q5WEP5.1|HEM3_BACSK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56910638|dbj|BAD65165.1| porphobilinogen deaminase [Bacillus clausii KSM-K16]
Length = 311
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 85/177 (48%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +GEID+AVHSMKDVP+ LL++ L +RE
Sbjct: 65 EAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELPAGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV+ RLRKL E A + A AGLK L E+V T
Sbjct: 125 TSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYGEDVITE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A+ QGA+G+ C +D + + L L+HEET +AV+ ERAFL ++G C
Sbjct: 185 YLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMNGGC 241
>gi|320354663|ref|YP_004196002.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
gi|320123165|gb|ADW18711.1| hydroxymethylbilane synthase [Desulfobulbus propionicus DSM 2032]
Length = 319
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 88/176 (50%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD-------------------------------KTIL 30
E+AL+ GE+D+AVHSMKDVPT L + TI
Sbjct: 66 EDALLAGEVDLAVHSMKDVPTELPEGLHIGVIPVRETPYDAFLSKTCTTLADLPQGATIG 125
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RLRKL+EGV A + A AGL+ L++ +T +
Sbjct: 126 TSSLRRKSQLMALRPDLDIVDLRGNIDTRLRKLDEGVYDAIILAGAGLRRLHLEHRITAL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ML A++QGA+GI +D ++A L L+H ET AV ERAFL L+G C
Sbjct: 186 LEPTQMLPAISQGALGIELRQDDTELADGLRFLHHGETAVAVEAERAFLLRLEGGC 241
>gi|239833011|ref|ZP_04681340.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
gi|239825278|gb|EEQ96846.1| porphobilinogen deaminase [Ochrobactrum intermedium LMG 3301]
Length = 314
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G ID+AVHS KD+PT L D L L+RE
Sbjct: 74 EQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G + T A AGL+ L + + +T +
Sbjct: 134 SSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVITEL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGAIGI D ++ L L H ET A+ CERAFL LDGSC
Sbjct: 194 VDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALDGSC 249
>gi|218290821|ref|ZP_03494890.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
gi|218239179|gb|EED06380.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius LAA1]
Length = 305
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL G D+AVHS+KDVP L D + +RE
Sbjct: 65 EDALATGRADLAVHSLKDVPFELRDGLTIGAVPRREDPRDALISRTGQGLFDLPPGARVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+R+L EG A + A +GL L + E +T
Sbjct: 125 TSSLRRQAALRRLRPDLRVDTLRGNVDTRIRRLEEGQFDAIVLAASGLHRLGLAEKITEY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D + AV QGA+ I C + D ++ +YLG++ + +AV ERAFL L+GSC
Sbjct: 185 LPVDRFVPAVGQGALAIECRAEDDEVLRYLGAIADPDATRAVEAERAFLSRLEGSC 240
>gi|444309260|ref|ZP_21144899.1| porphobilinogen deaminase [Ochrobactrum intermedium M86]
gi|443487318|gb|ELT50081.1| porphobilinogen deaminase [Ochrobactrum intermedium M86]
Length = 309
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G ID+AVHS KD+PT L D L L+RE
Sbjct: 69 EQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G + T A AGL+ L + + +T +
Sbjct: 129 SSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVITEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGAIGI D ++ L L H ET A+ CERAFL LDGSC
Sbjct: 189 VDPESFLPAPGQGAIGIETRIGDTRIDALLAPLAHRETGIALACERAFLAALDGSC 244
>gi|126463094|ref|YP_001044208.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
gi|126104758|gb|ABN77436.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17029]
Length = 322
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + IL L RE
Sbjct: 83 EEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQGATVG 142
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KLN+GV + T A+AGL L M E
Sbjct: 143 SSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEVPRVP 202
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAIGI ++D + + L +++ T + ER+FL LDGSC
Sbjct: 203 IEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258
>gi|332559141|ref|ZP_08413463.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
gi|332276853|gb|EGJ22168.1| porphobilinogen deaminase [Rhodobacter sphaeroides WS8N]
Length = 310
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + IL L RE
Sbjct: 71 EEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFADGGLADLPQGATVG 130
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KLN+GV + T A+AGL L M E
Sbjct: 131 SSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDEVPRVP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAIGI ++D + + L +++ T + ER+FL LDGSC
Sbjct: 191 IEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVRTGHRLAAERSFLLKLDGSC 246
>gi|301062020|ref|ZP_07202731.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
gi|300443871|gb|EFK07925.1| hydroxymethylbilane synthase [delta proteobacterium NaphS2]
Length = 316
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ ID+AVHSMKDVP L + +L RE
Sbjct: 64 EEALLQNRIDVAVHSMKDVPAELPEALMLSTFPPREDPSDALIAQENRRLDQLPEGARVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL G ++A + A AGL L ++ +T
Sbjct: 124 TSSLRRGAQLLHLRPDLTLVPLRGNVDTRLGKLKSGEVEAVILATAGLNRLGLSGVITQR 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P +L AV QGA+G+ +D++ + L LNH++TR AV ER FL TL+G C
Sbjct: 184 IPFHQLLPAVGQGALGLEVRRDDRETIRRLDFLNHDDTRTAVTAERGFLKTLEGGC 239
>gi|221640136|ref|YP_002526398.1| porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
gi|221160917|gb|ACM01897.1| Porphobilinogen deaminase [Rhodobacter sphaeroides KD131]
Length = 310
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + IL L RE
Sbjct: 71 EEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQGATVG 130
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KLN+GV + T A+AGL L M E
Sbjct: 131 SSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEVPRVP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAIGI ++D + + L +++ T + ER+FL LDGSC
Sbjct: 191 IEPEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 246
>gi|77464252|ref|YP_353756.1| porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
gi|77388670|gb|ABA79855.1| Porphobilinogen deaminase [Rhodobacter sphaeroides 2.4.1]
Length = 314
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + IL L RE
Sbjct: 75 EEALLSGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITFAEGGLADLPQGATVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KLN+GV + T A+AGL L M E
Sbjct: 135 SSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMNEVPRVP 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAIGI ++D + + L +++ T + ER+FL LDGSC
Sbjct: 195 IESEEMLSAVAQGAIGIERRTDDPRAQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 250
>gi|409439382|ref|ZP_11266431.1| hydroxymethylbilane synthase [Rhizobium mesoamericanum STM3625]
gi|408748758|emb|CCM77612.1| hydroxymethylbilane synthase [Rhizobium mesoamericanum STM3625]
Length = 295
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L +G++DIAVHS KD+PT L + L L RE
Sbjct: 55 EQQLASGDLDIAVHSAKDMPTQLPEGLCLSAYLPREDVRDAVIGRTAPKLIDLPQGATVG 114
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 115 SSSLRRQALIRRIRPDINVITFRGLVDTRLRKLQEGKVDATLLALAGLKRLGKVEVITDI 174
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ A AQGAI I D ++ L S+N T AV CERAFL LDGSC
Sbjct: 175 LAVETFPPAPAQGAICIESRIGDARIDALLASVNDAPTFDAVSCERAFLAALDGSC 230
>gi|325294021|ref|YP_004279885.1| porphobilinogen deaminase [Agrobacterium sp. H13-3]
gi|325061874|gb|ADY65565.1| Porphobilinogen deaminase [Agrobacterium sp. H13-3]
Length = 309
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+DIAVHS KD+PT L L L RE
Sbjct: 69 ESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG ATL A AGLK L M T+I
Sbjct: 129 SASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLGMENVPTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI + D +M + L +N T AV CERAFL LDGSC
Sbjct: 189 LDPKDFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAALDGSC 244
>gi|354583576|ref|ZP_09002474.1| porphobilinogen deaminase [Paenibacillus lactis 154]
gi|353197456|gb|EHB62937.1| porphobilinogen deaminase [Paenibacillus lactis 154]
Length = 317
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A+++GEID+AVHSMKD+P+ L + + LP
Sbjct: 69 EQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPKRKDPRDCLISMEGSTLDDLPQGAKVG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +R+RKL G QA + A AGL+ + + +T+
Sbjct: 129 TSSLRRSSQLKAYRPDLKIDWIRGNIDSRIRKLESGEFQAIILATAGLQRMGWEDRITSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LPID L AV QGA+GI C ND ++ L N E T + V ER FL L+G C
Sbjct: 189 LPIDISLPAVGQGALGIECRENDAELLHLLSLYNDEVTARTVSAERRFLSELNGGC 244
>gi|421589559|ref|ZP_16034687.1| porphobilinogen deaminase [Rhizobium sp. Pop5]
gi|403705460|gb|EJZ21042.1| porphobilinogen deaminase [Rhizobium sp. Pop5]
Length = 309
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L +GE+D AVHS KD+PT L D L L RE
Sbjct: 69 EQRLTSGELDFAVHSTKDMPTNLPDGLYLSAYLPREDIRDAVIGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVITFRGAVETRLRKLEEGQVDATLLALAGLKRLGKVEVITDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D + L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDTGIDDLLAPINDAPTYDTVSCERAFLAALDGSC 244
>gi|417858186|ref|ZP_12503243.1| porphobilinogen deaminase [Agrobacterium tumefaciens F2]
gi|338824190|gb|EGP58157.1| porphobilinogen deaminase [Agrobacterium tumefaciens F2]
Length = 309
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+DIAVHS KD+PT L L L RE
Sbjct: 69 ESQLLSGELDIAVHSSKDMPTVLPKGLHLSAFLPREDMRDAFIGRAAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG ATL A AGLK L M T I
Sbjct: 129 SASLRRQALIRRLRPDLNVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLGMDNVPTEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI + D +M L S+N T AV CERAFL LDGSC
Sbjct: 189 LDPKDFPPAPAQGAICVESRIGDTRMDDLLSSINDMPTYDAVTCERAFLAALDGSC 244
>gi|407786853|ref|ZP_11133997.1| porphobilinogen deaminase [Celeribacter baekdonensis B30]
gi|407200804|gb|EKE70809.1| porphobilinogen deaminase [Celeribacter baekdonensis B30]
Length = 314
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDV----PTYLLDKTILP-------------------------- 31
E+ L+NGE+DIAVHS KD+ P L+ T LP
Sbjct: 75 EDRLLNGEVDIAVHSTKDMSVEQPEGLVLDTYLPRENPFDAFITLDGRALADLPQGAVVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ G+VQ RL+KL +GV AT ALAGL L +
Sbjct: 135 SSSLRRKAQLLNKRPDLQVIEFRGSVQTRLQKLKDGVADATFLALAGLNRLGFDDVPRVA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAI I + D +A L +++H T QA+ CERAFL LDGSC
Sbjct: 195 VTAEEMLPAVAQGAISIERRAADHHIADMLAAIHHAPTGQALACERAFLAKLDGSC 250
>gi|225850000|ref|YP_002730234.1| porphobilinogen deaminase [Persephonella marina EX-H1]
gi|225645034|gb|ACO03220.1| porphobilinogen deaminase [Persephonella marina EX-H1]
Length = 308
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ EIDIAVHS+KDVPTY + L +RE
Sbjct: 64 EEAMLRNEIDIAVHSLKDVPTYFPEGLGLVAITEREDPRDAFLSVKYNSIEDMPEGAVLG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG + A AGLK L + V I
Sbjct: 124 TSSLRRKAQIMMKRKDIRIEDLRGNVDTRIRKLEEGQYDGIILAYAGLKRLGLEGKVRQI 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D M+ AVAQG +GI +D+K + + LNH E+ ERAFL TL+G C
Sbjct: 184 LQPDYMIPAVAQGFLGIEARLDDEKTREIVSVLNHRESEIRAKAERAFLKTLEGGC 239
>gi|404494753|ref|YP_006718859.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380]
gi|123756552|sp|Q3A009.1|HEM3_PELCD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77546736|gb|ABA90298.1| hydroxymethylbilane synthase [Pelobacter carbinolicus DSM 2380]
Length = 315
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL +G ID+AVHSMKDVP+ L ILPC RE
Sbjct: 67 EEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQLPQGARIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK+ E + + A AGLK L + E +
Sbjct: 127 TSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLELAERIAEY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D L A+ QGA+G+ C D + + + L+ +T AV ERAFL L+G C
Sbjct: 187 LSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRLNGGC 242
>gi|15889908|ref|NP_355589.1| porphobilinogen deaminase [Agrobacterium fabrum str. C58]
gi|23821691|sp|Q8UC46.1|HEM3_AGRT5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15157859|gb|AAK88374.1| porphobilinogen deaminase [Agrobacterium fabrum str. C58]
Length = 309
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+DIAVHS KD+PT L + L L RE
Sbjct: 69 ENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG ATL A AGLK L T I
Sbjct: 129 SASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLGKDNVPTEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAIG+ D +M K L +N T AV CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAALDGSC 244
>gi|398355402|ref|YP_006400866.1| porphobilinogen deaminase HemC [Sinorhizobium fredii USDA 257]
gi|390130728|gb|AFL54109.1| porphobilinogen deaminase HemC [Sinorhizobium fredii USDA 257]
Length = 330
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+PT L D L L RE
Sbjct: 90 EQQLLSGDLDFAVHSSKDMPTKLPDGLFLSAFLPREDIRDAFIGGTAPRLVQLPEGATVG 149
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGL+ L MT+ T +
Sbjct: 150 SSSLRRQALIRRLRPDINVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLGMTDVPTEL 209
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D ++ L +++ T +AV CER FL TLDGSC
Sbjct: 210 LDPKEFPPAPAQGAICIESRVGDNRVNALLAAIDDPRTHEAVACERGFLATLDGSC 265
>gi|418297814|ref|ZP_12909654.1| porphobilinogen deaminase [Agrobacterium tumefaciens CCNWGS0286]
gi|355537184|gb|EHH06444.1| porphobilinogen deaminase [Agrobacterium tumefaciens CCNWGS0286]
Length = 309
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+D+AVHS KD+PT L + L L RE
Sbjct: 69 ESQLLSGELDMAVHSSKDMPTVLPEGLYLSAFLPREDVRDAFIGRTAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG ATL A AGLK L T I
Sbjct: 129 SASLRRQALIRRLRPDLSVIIFRGQVDTRLRKLEEGQADATLLAFAGLKRLGKDNVPTEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAIG+ D +M + L +N T AV CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAIGVESRIGDTRMDELLAPINDRPTYDAVTCERAFLAALDGSC 244
>gi|427419219|ref|ZP_18909402.1| hydroxymethylbilane synthase [Leptolyngbya sp. PCC 7375]
gi|425761932|gb|EKV02785.1| hydroxymethylbilane synthase [Leptolyngbya sp. PCC 7375]
Length = 318
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ ++NG +D AVHS+KD+PT L + +L C +RE
Sbjct: 71 EDDMLNGTVDCAVHSLKDLPTRLPEGLMLGCVTERENPADAMVAHEKHAGKNLDQLPEGA 130
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RLRKL+EG A + A+AGLK L+M + +
Sbjct: 131 VIGTSSLRRLAQLRHHYPSFQFKDIRGNLNTRLRKLDEGQYDAIILAVAGLKRLDMADRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C S D + + +L H T Q ERAFL L+G C
Sbjct: 191 QQVVPADISLHAVGQGALGIECRSGDDDILAVIKTLEHLPTAQRCYAERAFLRELEGGC 249
>gi|358635952|dbj|BAL23249.1| porphobilinogen deaminase [Azoarcus sp. KH32C]
Length = 321
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E AL++G+ DIAVHSMKDVP L + LPC
Sbjct: 81 ETALLDGQADIAVHSMKDVPMQLPEPFALPCISAREVPLDAFVSSRYASLADMPPGAVVG 140
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GN+ RLRKL+EG A + A AGLK L + + + +
Sbjct: 141 TSSLRRESQLHAMYPMLSVTSLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLADRIRSE 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L A QGA+GI C +N ++A +L LN +T V ERA L GSC
Sbjct: 201 LPSEVSLPAAGQGALGIECLANRPEVAAWLAPLNDADTSACVRAERAVARALAGSC 256
>gi|315645740|ref|ZP_07898864.1| porphobilinogen deaminase [Paenibacillus vortex V453]
gi|315279218|gb|EFU42528.1| porphobilinogen deaminase [Paenibacillus vortex V453]
Length = 318
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A+++GEID+AVHSMKD+P+ L + + LP
Sbjct: 69 EQAMLDGEIDMAVHSMKDMPSVLPEGLVSGAVPARKDPRDCLISKEGATLDDLPQGAKVG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +R+RK+ EG QA + A AGL+ + + +T+
Sbjct: 129 TSSLRRSSQLKAYRPDLQIDWIRGNIDSRIRKMEEGEFQAIVLATAGLQRMGWEDRITSH 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L AV QGA+GI C ND ++ L N E T + V ER FL L+G C
Sbjct: 189 LPVEISLPAVGQGALGIECRENDSELLHLLSLYNDEVTARTVAAERKFLSELNGGC 244
>gi|408373181|ref|ZP_11170879.1| porphobilinogen deaminase [Alcanivorax hongdengensis A-11-3]
gi|407767019|gb|EKF75458.1| porphobilinogen deaminase [Alcanivorax hongdengensis A-11-3]
Length = 310
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G DIAVHSMKDVP L LP +RE
Sbjct: 67 EEAMMDGRADIAVHSMKDVPMALPPGFALPVICEREDPRDAFVSNHHDSLTALPQGACVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A AGLK L M E +
Sbjct: 127 TSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLEMHERIRYE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D ++ +L LN +T VV ERA L+G C
Sbjct: 187 MPPEESLPAVGQGAVGIECRDDDAQVKAWLAPLNDADTWDRVVAERAMNRRLEGGC 242
>gi|408786344|ref|ZP_11198081.1| porphobilinogen deaminase [Rhizobium lupini HPC(L)]
gi|408487716|gb|EKJ96033.1| porphobilinogen deaminase [Rhizobium lupini HPC(L)]
Length = 309
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+D+AVHS KD+PT L L L RE
Sbjct: 69 ESQLLSGELDMAVHSSKDMPTVLPQGLYLSAFLPREDIRDAFIGRTAPKLLELPHGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG ATL ALAGLK L T I
Sbjct: 129 SASLRRQALIRRLRPDLSVIIFRGQVDTRLRKLEEGQADATLLALAGLKRLGKDNVPTEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAIG+ D +M + L +N T +V CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAIGVESRIGDTRMDELLAPINDRPTHDSVSCERAFLAALDGSC 244
>gi|424911386|ref|ZP_18334763.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392847417|gb|EJA99939.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 309
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+D+AVHS KD+PT L L L RE
Sbjct: 69 ESQLLSGELDMAVHSSKDMPTVLPQGLYLSAFLPREDIRDAFIGRTAPKLLELPHGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG ATL ALAGLK L T I
Sbjct: 129 SASLRRQALIRRLRPDLSVIIFRGQVDTRLRKLEEGQADATLLALAGLKRLGKDNVPTEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAIG+ D +M + L +N T +V CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAIGVESRIGDTRMDELLAPINDRPTHDSVSCERAFLAALDGSC 244
>gi|163757401|ref|ZP_02164490.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
gi|162284903|gb|EDQ35185.1| porphobilinogen deaminase [Hoeflea phototrophica DFL-43]
Length = 312
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L +G +D+AVHS KD+PT L + + L+RE
Sbjct: 72 EEQLSDGRLDLAVHSSKDMPTALPEGLGIVTYLEREDPRDAYISSAAPRLEDLPQKAVVG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL +G + AT+ A AGLK L +E VTN+
Sbjct: 132 SSSLRRQALIRRLRPDISVITFRGLVDTRLRKLADGEVHATMLAFAGLKRLGKSEVVTNL 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + A QGAI I +D+++A+ L ++H +T A+ CER FLG LDGSC
Sbjct: 192 MDPESFPPAPGQGAICIEARLDDERIAELLAPIDHADTHAALNCERGFLGALDGSC 247
>gi|188584576|ref|YP_001928021.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
gi|179348074|gb|ACB83486.1| porphobilinogen deaminase [Methylobacterium populi BJ001]
Length = 309
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL ID+AVHSMKDV T+L D + C L+R+
Sbjct: 68 EQALFADTIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSAGTANGLADLPSGARV 127
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GN R+RKL G ATL ALAGL+ L M + +
Sbjct: 128 GTSSLRRGAQVLMHRPDLMIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMEDVARS 187
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP+++ML AVAQGA+GI C + D + L + T A+ ER L LDGSC
Sbjct: 188 VLPVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSC 244
>gi|424916459|ref|ZP_18339823.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392852635|gb|EJB05156.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 309
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++GE+D AVHS KD+PT L D L L RE
Sbjct: 69 EQQLVSGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLGKVEVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI + D ++ L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAALDGSC 244
>gi|56698469|ref|YP_168844.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
gi|56680206|gb|AAV96872.1| porphobilinogen deaminase [Ruegeria pomeroyi DSS-3]
Length = 319
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 90/176 (51%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
EEA++ G+IDIAVHS KD+P L+ T LP
Sbjct: 79 EEAMLRGDIDIAVHSTKDMPVEQPAGLVLDTFLPREDVRDAFISPGHSAIRDLPLGAVVG 138
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RLRKL+EGV + T A+AG++ LNM E
Sbjct: 139 TSSLRRKAQLLNRRPDLKVVEFRGNVQTRLRKLSEGVAECTFLAMAGIRRLNMAEVPATA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML A+AQGAIGI +D + A+ L +++H ET Q + ERA L LDGSC
Sbjct: 199 ISPDDMLPAIAQGAIGIERRMDDTRAAEMLTAIHHGETGQRLAAERALLAALDGSC 254
>gi|418409270|ref|ZP_12982583.1| porphobilinogen deaminase [Agrobacterium tumefaciens 5A]
gi|358004587|gb|EHJ96915.1| porphobilinogen deaminase [Agrobacterium tumefaciens 5A]
Length = 309
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+DIAVHS KD+PT L L L RE
Sbjct: 69 ESQLLSGELDIAVHSSKDMPTVLPKGLYLSAFLPREDMRDAFIGRTAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG ATL A AGLK L M T+I
Sbjct: 129 SASLRRQALIRRLRPDLSVIIFRGQVETRLRKLEEGQADATLLAFAGLKRLGMENVPTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI + D +M + L +N T AV CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAICVESRIGDTRMDELLSPINDIPTYDAVTCERAFLAALDGSC 244
>gi|405377299|ref|ZP_11031242.1| porphobilinogen deaminase [Rhizobium sp. CF142]
gi|397326112|gb|EJJ30434.1| porphobilinogen deaminase [Rhizobium sp. CF142]
Length = 309
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ G++D+AVHS KD+PT L + L L RE
Sbjct: 69 EQQLVAGDLDLAVHSSKDMPTVLPEGLYLSAYLPREDIRDAVVGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVITFRGLVDTRLRKLQEGQVDATLLALAGLKRLGKVEVITDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D ++ + L +N T V CERAFL LDGSC
Sbjct: 189 LDPDSFPPAPAQGAICIESRIGDTRIDELLAPINDAPTFDTVSCERAFLAALDGSC 244
>gi|310815397|ref|YP_003963361.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
gi|385232933|ref|YP_005794275.1| hypothetical protein KVU_0440 [Ketogulonicigenium vulgare WSH-001]
gi|308754132|gb|ADO42061.1| porphobilinogen deaminase [Ketogulonicigenium vulgare Y25]
gi|343461844|gb|AEM40279.1| hypothetical protein KVU_0440 [Ketogulonicigenium vulgare WSH-001]
Length = 314
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G IDIAVHSMKD+P +L C L RE
Sbjct: 75 EDALLDGSIDIAVHSMKDMPVEQPAGLLLDCYLPREDVRDAFVSLHGWTLADVPAGKVIG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL+EGV AT A+AGL L +
Sbjct: 135 TSSLRRRAQILARRPDLTVVEFRGNVQTRLKKLDEGVADATFLAMAGLNRLQRGDVPLKA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ ML AVAQGAIGI ++D+ + L ++ T + ERAFL LDGSC
Sbjct: 195 LEVEQMLPAVAQGAIGIERRADDRIIEGMLAVIHDGPTGVRLAAERAFLAGLDGSC 250
>gi|389819474|ref|ZP_10209342.1| porphobilinogen deaminase [Planococcus antarcticus DSM 14505]
gi|388463272|gb|EIM05636.1| porphobilinogen deaminase [Planococcus antarcticus DSM 14505]
Length = 309
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P+ L + + C RE
Sbjct: 65 EQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPDREDPRDAYIANDHVKLMELPVGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL G A + A AGLK + ++ VT
Sbjct: 125 TSSLRRSSQLLLIRPDLDIQWIRGNIDTRLAKLKAGDFDAIILAAAGLKRMGWKDDLVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A+ QGA+GI C +DK++ L L+HE T AV ER FL +DGSC
Sbjct: 185 FMEVDDCLPAIGQGALGIECREDDKELIAELAKLDHENTALAVNAERKFLKDMDGSC 241
>gi|424886735|ref|ZP_18310343.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393176086|gb|EJC76128.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 309
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L +GE+D AVHS KD+PT+L D L L RE
Sbjct: 69 EQQLASGELDFAVHSAKDMPTHLPDGLHLSAYLPREDIRDAVIGRTARKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRK+ EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVVTFRGLVETRLRKVEEGQVDATLLALAGLKRLGKVEVITDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D + L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDTGIDDLLAPVNDAATFDTVSCERAFLAALDGSC 244
>gi|430005426|emb|CCF21227.1| Porphobilinogen deaminase [Rhizobium sp.]
Length = 309
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L +GE+D AVHS KD+PT L D + L RE
Sbjct: 69 EEQLSSGELDFAVHSSKDMPTVLPDGLHISAYLPREDIRDALIGRTAPSLTALPDGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G+V RLRKL+EG + ATL A AGLK L E VT +
Sbjct: 129 TASLRRQALVRRIRPDIQVTIFRGSVGTRLRKLDEGHVDATLLAFAGLKRLAREEVVTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D+++ L ++N T AV CERAFL LDGSC
Sbjct: 189 LDPEHFPPAPAQGAICIESRIGDRRVDTLLEAVNDRPTYDAVSCERAFLMALDGSC 244
>gi|153008310|ref|YP_001369525.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
gi|166217778|sp|A6WXJ2.1|HEM3_OCHA4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|151560198|gb|ABS13696.1| porphobilinogen deaminase [Ochrobactrum anthropi ATCC 49188]
Length = 314
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G ID+AVHS KD+PT L D L L+RE
Sbjct: 74 EQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A QGAIGI D ++ L L H ET A+ CERAFL LDGSC
Sbjct: 194 ADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSC 249
>gi|404316591|ref|ZP_10964524.1| porphobilinogen deaminase [Ochrobactrum anthropi CTS-325]
Length = 314
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G ID+AVHS KD+PT L D L L+RE
Sbjct: 74 EQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLIDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A QGAIGI D ++ L L H ET A+ CERAFL LDGSC
Sbjct: 194 ADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSC 249
>gi|332981813|ref|YP_004463254.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
gi|332699491|gb|AEE96432.1| porphobilinogen deaminase [Mahella australiensis 50-1 BON]
Length = 292
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G ID+AVHSMKDVP+ L D ++ RE
Sbjct: 65 EQALMDGHIDMAVHSMKDVPSQLPDGLMIGAMPWREDPRDAFISSDGRTIEQLGCRARIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+ K+NE + + A+AGLK L +++ +T I
Sbjct: 125 IGSARRSAQLKNCFPGIDIVAIRGNIDTRINKINEAGLDGIVLAVAGLKRLGVSDVITQI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D A QGA+GI +D+K A L LNH TR AV ER F+ + G C
Sbjct: 185 LPVDVCTPAAGQGALGIEIRKSDEKAADLLMPLNHAPTRAAVDAERMFMAMMGGDC 240
>gi|83945095|ref|ZP_00957461.1| porphobilinogen deaminase [Oceanicaulis sp. HTCC2633]
gi|83851877|gb|EAP89732.1| porphobilinogen deaminase [Oceanicaulis sp. HTCC2633]
Length = 320
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G+ AVHSMKDVPT L D + C L+RE
Sbjct: 71 ERALLDGDARFAVHSMKDVPTTLPDGLEIACVLEREDPRDTLLTRDGISRIEDLPQGATL 130
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV RL KLN G + AT A AGL+ L +
Sbjct: 131 GTASIRRQSQALALRPDLNIVLLRGNVDTRLEKLNSGEVDATFLARAGLRRLGREQAELP 190
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + ++ A AQGA+GI S+D + K L LNH TR A+ ER FL LDGSC
Sbjct: 191 PLELTAVIPAPAQGAVGIEIRSDDVEARKALEPLNHLPTRIAIAAERGFLQALDGSC 247
>gi|254463278|ref|ZP_05076694.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2083]
gi|206679867|gb|EDZ44354.1| porphobilinogen deaminase [Rhodobacteraceae bacterium HTCC2083]
Length = 295
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ +++G IDIAVHSMKD+P + +L L RE
Sbjct: 55 EDDMLSGAIDIAVHSMKDMPVLQPEGLVLDTYLPREDVRDAFVSSGHERLADLPSGAVVG 114
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL + V T A+AGL+ L+M +
Sbjct: 115 TSSLRRRAQLLNYRPDLNVVEFRGNVQTRLKKLEDKVADCTFLAMAGLRRLDMAHVAKSA 174
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAIGI ND A+ L +++ +T Q + ERAFL LDGSC
Sbjct: 175 IETEEMLPAVAQGAIGIERRINDTNAAEMLAAIHDTQTGQRLAAERAFLAALDGSC 230
>gi|146276603|ref|YP_001166762.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
gi|145554844|gb|ABP69457.1| porphobilinogen deaminase [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G IDIAVHSMKD+PT + IL L RE
Sbjct: 83 EEALLDGGIDIAVHSMKDMPTLQPEGLILDTYLPREDTRDAFITYAEGGLADLPQGATVG 142
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KLN+GV + T A+AGL L M +
Sbjct: 143 SSSLRRRAQLLNKRPDLQVVEFRGNLQTRLKKLNDGVARGTFLAMAGLNRLKMDDVPRVA 202
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ML AVAQGAIGI +D + + L +++ T + ER+FL LDGSC
Sbjct: 203 IEPEEMLSAVAQGAIGIERRIDDPRTQEMLAAIHDVPTGHRLAAERSFLLKLDGSC 258
>gi|118581775|ref|YP_903025.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
gi|158512569|sp|A1AUE7.1|HEM3_PELPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|118504485|gb|ABL00968.1| porphobilinogen deaminase [Pelobacter propionicus DSM 2379]
Length = 310
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSRAARFSHLPPGARVGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+RKL+E + A + A AGLK L +T+ V L
Sbjct: 127 SALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLGLTQRVAEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ + A+ QGA+GI C +D + + + NH +T AV ERA L G C
Sbjct: 187 DVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRCQGGC 241
>gi|240141705|ref|YP_002966185.1| porphobilinogen deaminase [Methylobacterium extorquens AM1]
gi|418060748|ref|ZP_12698645.1| porphobilinogen deaminase [Methylobacterium extorquens DSM 13060]
gi|240011682|gb|ACS42908.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens AM1]
gi|373565689|gb|EHP91721.1| porphobilinogen deaminase [Methylobacterium extorquens DSM 13060]
Length = 294
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID+AVHSMKDV T+L D + C L+R+
Sbjct: 53 EQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARV 112
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GN R+RKL G ATL ALAGL+ L M + +
Sbjct: 113 GTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARS 172
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L +++ML AVAQGA+GI C + D + L + T A+ ER L LDGSC
Sbjct: 173 VLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSC 229
>gi|126725997|ref|ZP_01741839.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
gi|126705201|gb|EBA04292.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2150]
Length = 313
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G+IDIAVHSMKD+P D + C L RE
Sbjct: 73 EEAMLSGDIDIAVHSMKDMPVEQPDGLAITCYLPREDVRDAFVSLSADSFDDLRQGATVG 132
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R+RKL +GV AT A+AGL L M++
Sbjct: 133 SSSLRRRAQLAHRRPDLNLVEFRGNVQTRMRKLGDGVADATFLAMAGLIRLGMSDVARLP 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AVAQGAIGI D +++ L +++ + T + ERAFL ++GSC
Sbjct: 193 LETDVFLPAVAQGAIGIEQRIGDSVISEMLTAIHDQHTGDLLAAERAFLARVEGSC 248
>gi|220921724|ref|YP_002497025.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
gi|219946330|gb|ACL56722.1| porphobilinogen deaminase [Methylobacterium nodulans ORS 2060]
Length = 318
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL GEID+AVHSMKDV T+L D ++ L+R+
Sbjct: 78 EQALFAGEIDLAVHSMKDVETWLPDGLVIASILERDDPRDAFLSLKARSLAELPAGSRVG 137
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN R+R+L EG ATL A+AGL+ L + +
Sbjct: 138 TSSLRRGAQVLMRRPDLQIVPLRGNANTRIRRLEEGACDATLLAIAGLERLGLAHLAQEV 197
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ML AVAQGA+GI C + D+++ L ++ T A+ ER L LDGSC
Sbjct: 198 MGTDTMLPAVAQGALGIECRAADQELIDLLQAVACPRTTTALAAERGLLAELDGSC 253
>gi|428317687|ref|YP_007115569.1| hydroxymethylbilane synthase [Oscillatoria nigro-viridis PCC 7112]
gi|428241367|gb|AFZ07153.1| hydroxymethylbilane synthase [Oscillatoria nigro-viridis PCC 7112]
Length = 323
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN E D AVHS+KD+PT L + IL C +RE
Sbjct: 73 ETGMINNETDFAVHSLKDLPTNLPEGLILGCVTERENPADALVVHSKHKDKQLDTLPEGS 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+EG A + A+AGL+ L M + +
Sbjct: 133 VIGTSSLRRLAQLRHHFPHFEFKDIRGNLNTRLAKLDEGGYDAIILAVAGLERLGMGDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C + D ++ + + +L H ET Q ERAFL L+G C
Sbjct: 193 HQIIPAEISLHAVGQGALGIECRAGDTEIMEVIKALEHSETAQRCYAERAFLRELEGGC 251
>gi|328541997|ref|YP_004302106.1| porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1]
gi|326411747|gb|ADZ68810.1| Porphobilinogen deaminase [Polymorphum gilvum SL003B-26A1]
Length = 302
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ ID+AVHS KD+PT L D L L RE
Sbjct: 64 EEALLDDRIDLAVHSSKDMPTLLPDGLALTAFLPREDVRDAFVSPKAKMLMDLPQGAVVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +G + ATL A AGL+ L + + VT++
Sbjct: 124 SSSLRRQAMIKRLRPDIEVVMYRGNVQTRLQKLEDGAVDATLLAYAGLRRLGLADVVTSL 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGAI I D L +++ ET + ERAFL LDGSC
Sbjct: 184 LDTDAFLPAVGQGAICIESRVEDAATLGLLAAIHDRETEIRLTAERAFLAELDGSC 239
>gi|404498083|ref|YP_006722189.1| porphobilinogen deaminase [Geobacter metallireducens GS-15]
gi|418066028|ref|ZP_12703396.1| porphobilinogen deaminase [Geobacter metallireducens RCH3]
gi|123742774|sp|Q39QM7.1|HEM3_GEOMG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78195680|gb|ABB33447.1| hydroxymethylbilane synthase [Geobacter metallireducens GS-15]
gi|373561261|gb|EHP87500.1| porphobilinogen deaminase [Geobacter metallireducens RCH3]
Length = 318
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 79/175 (45%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFADLPQGARIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+RKL + + A + A AGL L + V+ L
Sbjct: 127 SALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLGFADQVSEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P++ L A+ QGA+GI C +D+ + + NH +T AV ERA L +G C
Sbjct: 187 PVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRCEGGC 241
>gi|163854244|ref|YP_001642287.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
gi|163665849|gb|ABY33216.1| porphobilinogen deaminase [Methylobacterium extorquens PA1]
Length = 309
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID+AVHSMKDV T+L D + C L+R+
Sbjct: 68 EQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARV 127
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GN R+RKL G ATL ALAGL+ L M + +
Sbjct: 128 GTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMADVARS 187
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L +++ML AVAQGA+GI C + D + L + T A+ ER L LDGSC
Sbjct: 188 VLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSC 244
>gi|402848721|ref|ZP_10896972.1| Porphobilinogen deaminase [Rhodovulum sp. PH10]
gi|402501000|gb|EJW12661.1| Porphobilinogen deaminase [Rhodovulum sp. PH10]
Length = 310
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + ID+AVHS KD+ T L D +L L RE
Sbjct: 72 EQALFDETIDLAVHSAKDMETALPDGLVLTACLPREDVRDAFICAKAKTLAELPAGSKVG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRK++ G + ATL ALAGLK L + + ++
Sbjct: 132 TASLRRGAMVKRLRPDIEVVSIRGNVDTRLRKISSGEVDATLLALAGLKRLGIADKAASV 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ L AV QGA+ I + D + + L +++ +TR A+ ERAFLG LDGSC
Sbjct: 192 FDAETFLPAVGQGAVAIETRAGDSRTRELLAAIDCRDTRIALTAERAFLGALDGSC 247
>gi|222150055|ref|YP_002551012.1| porphobilinogen deaminase [Agrobacterium vitis S4]
gi|221737037|gb|ACM38000.1| porphobilinogen deaminase [Agrobacterium vitis S4]
Length = 309
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G +D AVHS KD+PT L D + L RE
Sbjct: 69 EQQLLSGGLDFAVHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLELAEGAVIG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL G + ATL A+AGLK L+ +T
Sbjct: 129 SASLRRQALIRRLRPDLQVITYRGAVETRLRKLAAGEVDATLLAVAGLKRLDKETVITQY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ A AQGAI I +D+++ L +NH T AV CERAFL LDGSC
Sbjct: 189 LDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAALDGSC 244
>gi|424897379|ref|ZP_18320953.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393181606|gb|EJC81645.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 329
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L +GE+D AVHS KD+PT L + L L RE
Sbjct: 89 EQKLASGELDFAVHSAKDMPTKLPEGLHLSAYLPREDIRDAVIGRTARKLIDLPHGATVG 148
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 149 SSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLGKVEVITDI 208
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D + L +N T AV CERAFL LDGSC
Sbjct: 209 LDPDTFPPAPAQGAICIESRIGDTGIDDLLAPVNDAATFDAVSCERAFLAALDGSC 264
>gi|413926449|gb|AFW66381.1| hypothetical protein ZEAMMB73_808224 [Zea mays]
Length = 132
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 67 MTENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTL 126
M EN T +L +++ML AVAQGAIGIAC SND KM +YL +LNHE+TR AV CER FL L
Sbjct: 1 MAENATAVLSVEEMLPAVAQGAIGIACRSNDDKMMEYLSALNHEDTRLAVACEREFLAVL 60
Query: 127 DGSC 130
DG+C
Sbjct: 61 DGNC 64
>gi|218533190|ref|YP_002424006.1| porphobilinogen deaminase [Methylobacterium extorquens CM4]
gi|218525493|gb|ACK86078.1| porphobilinogen deaminase [Methylobacterium extorquens CM4]
Length = 309
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID+AVHSMKDV T+L D + C L+R+
Sbjct: 68 EQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARV 127
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GN R+RKL G ATL ALAGL+ L M + +
Sbjct: 128 GTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMEDVARS 187
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L +++ML AVAQGA+GI C + D + L + T A+ ER L LDGSC
Sbjct: 188 VLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSC 244
>gi|374622852|ref|ZP_09695372.1| Hydroxymethylbilane synthase [Ectothiorhodospira sp. PHS-1]
gi|373941973|gb|EHQ52518.1| Hydroxymethylbilane synthase [Ectothiorhodospira sp. PHS-1]
Length = 322
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ GE DIAVHSMKDVP L + LP + RE
Sbjct: 67 ETAMLQGEADIAVHSMKDVPMELPEGLELPVIMDREDPCDAFVSNKYKSLEELPEGARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV +RL KL+ G A + A AGLK L + +T I
Sbjct: 127 TSSLRRQCQIRARFPSFKVLDLRGNVNSRLAKLDAGDYDAIILAAAGLKRLGFEDRITAI 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L A+ QGAIGI C SND ++ + + LN +T V+ ERAF L+G C
Sbjct: 187 LTPEESLPAIGQGAIGIECRSNDPEVMELIAPLNDPDTHLRVITERAFNRRLNGGC 242
>gi|335033572|ref|ZP_08526937.1| porphobilinogen deaminase [Agrobacterium sp. ATCC 31749]
gi|333794863|gb|EGL66195.1| porphobilinogen deaminase [Agrobacterium sp. ATCC 31749]
Length = 309
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+DIAVHS KD+PT L + L L RE
Sbjct: 69 ENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG ATL A AGLK L T +
Sbjct: 129 SASLRRQALIRRLRPDLSVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLGKDNVPTEV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAIG+ D +M + L +N T AV CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAIGVESRIGDARMDELLAPVNDRPTYDAVTCERAFLAALDGSC 244
>gi|220904556|ref|YP_002479868.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868855|gb|ACL49190.1| porphobilinogen deaminase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+NGE D+AVHSMKDVP L + IL C RE
Sbjct: 66 EEALLNGEADLAVHSMKDVPMELPEGLILGCVPPREDPTDCLLSHKYDSVAALPPNACVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL EG+ A + A AGLK L ++ +
Sbjct: 126 TSSLRRQSQLLAQRPDLRIESLRGNVDTRLRKLQEGMYDAIILASAGLKRLGLSAPHMHA 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI C ND ++ L + TR V ER FL L+G C
Sbjct: 186 LDPHTFLPAVGQGALGIECRENDYELFTLLAEMEDSATRVCVEAERGFLAGLEGGC 241
>gi|323489960|ref|ZP_08095181.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
gi|323396256|gb|EGA89081.1| porphobilinogen deaminase [Planococcus donghaensis MPA1U2]
Length = 309
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P+ L + + C +RE
Sbjct: 65 EQALFDREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLPVGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL G A + A AGLK + ++ VT
Sbjct: 125 TSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLKSGDFDAIILAAAGLKRMGWKDDLVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ L A+ QG++GI C D ++ L LNHE+T AV ER FL +DGSC
Sbjct: 185 FLEVDECLPAIGQGSLGIECREEDTELLSELAKLNHEDTALAVNAERKFLKDMDGSC 241
>gi|313893126|ref|ZP_07826703.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313442479|gb|EFR60894.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 305
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILP---- 31
EEA+ G+IDIAVHS+KD+PT L LDK LP
Sbjct: 66 EEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDK--LPQGAR 123
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNVQ RL K+ + + A AGLK L + + +T
Sbjct: 124 VGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQIT 183
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+M+ AV QGA+ I C ++D +M + L +N E TR AV ER+FL L+G C
Sbjct: 184 QVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGC 241
>gi|430750759|ref|YP_007213667.1| porphobilinogen deaminase [Thermobacillus composti KWC4]
gi|430734724|gb|AGA58669.1| porphobilinogen deaminase [Thermobacillus composti KWC4]
Length = 310
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+ L++G IDIAVHSMKDVP L D + LP
Sbjct: 72 EQELLDGGIDIAVHSMKDVPHTLEDGLVIGAVPRRVDPRDVLIARGARSIAELPHGARVG 131
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+R GN+ R+RKL + A + A+AGLK + + T
Sbjct: 132 TSSLRRVCQLKRLRPDLNLEPVRGNIDTRIRKLETEGLDAIILAMAGLKRMGWEDRATAP 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+++ L AV QGA+G+ C +ND++M L N E + +AV ER+FL L+G C
Sbjct: 192 IPVEECLPAVGQGALGVECRANDEEMLALLSRYNDEVSARAVEAERSFLAELNGGC 247
>gi|126658960|ref|ZP_01730102.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
gi|126619758|gb|EAZ90485.1| porphobilinogen deaminase [Cyanothece sp. CCY0110]
Length = 317
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A++ ++D AVHS+KD+PT L D +L C +R
Sbjct: 69 ETAMLQNQVDFAVHSLKDLPTNLPDGLMLGCVTERVNPADALVVNEKHKDKQLDTLPEGS 128
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L+M++ +
Sbjct: 129 VIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLDMSDRI 188
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C + D ++ L +L H ETR ERAFL L+G C
Sbjct: 189 HQVIPDDISLHAVGQGALGIECRTGDPEILDLLKALEHPETRDRCYAERAFLRELEGGC 247
>gi|258511805|ref|YP_003185239.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478531|gb|ACV58850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 305
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL G+ D+AVHS+KDVP L D + RE
Sbjct: 65 EDALATGQADLAVHSLKDVPFELRDGLTIGAVPPREDPRDALISRTGQGLFDLPPGARVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLR+L EG A + A +GL L + E +T
Sbjct: 125 TSSLRRQAALRRLRPDLCVETLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGLAERITEY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D + AV QGA+ I C + D ++ ++L ++ + +AV ERAFL L+GSC
Sbjct: 185 LPVDRFVPAVGQGALAIECRAEDDEVMRHLAAIADPDATRAVEAERAFLSRLEGSC 240
>gi|334118130|ref|ZP_08492220.1| Porphobilinogen deaminase [Microcoleus vaginatus FGP-2]
gi|333460115|gb|EGK88725.1| Porphobilinogen deaminase [Microcoleus vaginatus FGP-2]
Length = 323
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN E D AVHS+KD+PT L + IL C +RE
Sbjct: 73 ETGMINNETDFAVHSLKDLPTNLPEGLILGCVTERENPADALVVHSKHKDKQLDTLPEGS 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+EG A + A+AGL+ L M + +
Sbjct: 133 VIGTSSLRRLAQLRHHFPHFEFKDIRGNLNTRLAKLDEGGYDAIILAVAGLERLGMGDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C + D ++ + +L H ET Q ERAFL L+G C
Sbjct: 193 HQIIPAEISLHAVGQGALGIECRAGDTEIMAVIKALEHSETAQRCYAERAFLRELEGGC 251
>gi|153875202|ref|ZP_02003104.1| porphobilinogen deaminase [Beggiatoa sp. PS]
gi|152068334|gb|EDN66896.1| porphobilinogen deaminase [Beggiatoa sp. PS]
Length = 309
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L G++DIAVHSMKDVP ILP ++RE
Sbjct: 68 ENGLFEGKVDIAVHSMKDVPVEFPPGLILPVIMEREEPYDAFVSNHYSGFTALPQGAIVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL+KL+ G A + A AGLK L M E + +
Sbjct: 128 TSSLRRQCQLLVLRPDLQIRTLRGNVGTRLKKLDNGDYDAIILAAAGLKRLGMAERIREV 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + ML A+ QGAIGI C ++D + + + LNH+ T++ + ERA L+G C
Sbjct: 188 LKPEVMLPAIGQGAIGIECRADDTETQQLIAVLNHKPTQERLKAERALNEQLNGGC 243
>gi|209551271|ref|YP_002283188.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537027|gb|ACI56962.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 309
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L GE+D AVHS KD+PT L D L L RE
Sbjct: 69 EQQLTTGELDFAVHSAKDMPTKLPDGLHLSAYLPREDIRDAVIGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLGKVEVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI + D ++ L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICLESRIGDTQIDDLLAPVNDAATFDTVSCERAFLAALDGSC 244
>gi|297568516|ref|YP_003689860.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
gi|296924431|gb|ADH85241.1| porphobilinogen deaminase [Desulfurivibrio alkaliphilus AHT2]
Length = 311
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD-------------------------------KTIL 30
EEAL+ E+DIAVHSMKDVP L + TI
Sbjct: 66 EEALLRREVDIAVHSMKDVPAELPEGLHIGIITEREKPFDAFITNNYKTLAEVPQGATIG 125
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RLRKL+EGV A + A AGL L++ T
Sbjct: 126 TSSLRRKAQLARLRPDLKIEDLRGNLDTRLRKLDEGVYDAIILAAAGLNRLDLFHRATFC 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+ML AVAQGA+GI D+ + + L ++H ET AV ER++L L+G C
Sbjct: 186 FQPDEMLPAVAQGAVGIELRRADEDLLQMLSFMDHRETTLAVHAERSYLKRLEGGC 241
>gi|322421444|ref|YP_004200667.1| porphobilinogen deaminase [Geobacter sp. M18]
gi|320127831|gb|ADW15391.1| porphobilinogen deaminase [Geobacter sp. M18]
Length = 318
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFADLPQGARIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNVQ R+ KL + A + A AGL L + +T +L
Sbjct: 127 SALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLETEGLDAVILAAAGLNRLGFADQITELL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D L A+ QGA+GI C+ +++++ + NH +T +AV ERA L +G C
Sbjct: 187 PTDLSLPAIGQGALGIECSLSNEEVKDAISFFNHPDTSRAVRAERALLWRCEGGC 241
>gi|238018694|ref|ZP_04599120.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
gi|237865165|gb|EEP66455.1| hypothetical protein VEIDISOL_00538 [Veillonella dispar ATCC 17748]
Length = 319
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILP---- 31
EEA+ G+IDIAVHS+KD+PT L LDK LP
Sbjct: 73 EEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDK--LPEGAC 130
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNVQ RL K+ + + A AGLK L + + +T
Sbjct: 131 VGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLDDQIT 190
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+M+ AV QGA+ I C ++D +M + L +N E TR AV ER+FL L+G C
Sbjct: 191 QVFKADEMIPAVGQGALAIECRADDTEMLEMLAPINDEATRYAVEGERSFLRQLNGGC 248
>gi|254564213|ref|YP_003071308.1| Porphobilinogen deaminase [Methylobacterium extorquens DM4]
gi|254271491|emb|CAX27506.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Methylobacterium
extorquens DM4]
Length = 294
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID+AVHSMKDV T+L D + C L+R+
Sbjct: 53 EQALFADEIDVAVHSMKDVETWLPDGLAIACILERDDPRDAFLSANGANGLADLPPGARV 112
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GN R+RKL G ATL ALAGL+ L M +
Sbjct: 113 GTSSLRRGAQVLMHRPDLTIVPLRGNANTRMRKLEAGECDATLLALAGLQRLGMANVARS 172
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L +++ML AVAQGA+GI C + D + L + T A+ ER L LDGSC
Sbjct: 173 VLSVEEMLPAVAQGALGIECRAGDDAIRALLAPVACATTTTALDAERGLLAELDGSC 229
>gi|147677307|ref|YP_001211522.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
gi|189028095|sp|A5D3L5.1|HEM3_PELTS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146273404|dbj|BAF59153.1| porphobilinogen deaminase [Pelotomaculum thermopropionicum SI]
Length = 312
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ GEID+AVHSMKD+PT L + ++ +RE
Sbjct: 66 EAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDELPGGALVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL E + A + A AGL + + +T +
Sbjct: 126 TSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGRQDAITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D L AV QG+IG+ S+D ++ + + ++H E+R AV ERAFL L+G C
Sbjct: 186 IPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLEGGC 241
>gi|110678608|ref|YP_681615.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
gi|109454724|gb|ABG30929.1| porphobilinogen deaminase [Roseobacter denitrificans OCh 114]
Length = 314
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L++ +IDIAVHSMKD+PT D IL L RE
Sbjct: 75 EEDLLSEKIDIAVHSMKDMPTLQPDGLILDTYLPREDVRDAFISPTLKGIADLAQGAVVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV + T A AGL L M E
Sbjct: 135 TSSLRRKAQLLNRRPDLNVVEFRGNVQTRLKKLADGVAECTFLACAGLSRLKMDEVPATP 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ML AVAQGAIGI D A+ L +++ T Q + ER FL TLDGSC
Sbjct: 195 IETDHMLPAVAQGAIGIERRIADTNTAELLSAIHDGPTGQRLAAERNFLLTLDGSC 250
>gi|443317493|ref|ZP_21046903.1| hydroxymethylbilane synthase [Leptolyngbya sp. PCC 6406]
gi|442782933|gb|ELR92863.1| hydroxymethylbilane synthase [Leptolyngbya sp. PCC 6406]
Length = 321
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ ++ G+ID AVHS+KD+PT L + IL C +RE
Sbjct: 74 EDGMVQGDIDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHAQHQDKQIHTLPQGA 133
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RLRKL++G A + A+AGL+ L M + V
Sbjct: 134 VIGTSSLRRLAQLRHHYPHFTFKDIRGNLNTRLRKLDDGEYDAIILAVAGLERLGMGDRV 193
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C D ++ L +L H T + ERAFL L+G C
Sbjct: 194 HQILPPEVSLHAVGQGALGIECREGDGEILALLKTLEHLPTTYRCLAERAFLRELEGGC 252
>gi|392957355|ref|ZP_10322879.1| porphobilinogen deaminase [Bacillus macauensis ZFHKF-1]
gi|391876762|gb|EIT85358.1| porphobilinogen deaminase [Bacillus macauensis ZFHKF-1]
Length = 310
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+AL++ EID+AVHSMKD+P L + ++ C +R
Sbjct: 65 EQALLSKEIDMAVHSMKDMPALLPEGLMIGCTPKRVDPRDAFISHTYDSLASLPAGAIVG 124
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL +G A + A AGL+ + + E VT
Sbjct: 125 TSSLRRAAQLLHKRPDLTIRSIRGNIDTRLSKLKDGSFDAIILAAAGLERMGWSKETVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LPI L AV QGA+ I C +D ++ + L +N +ET + V+ ERAFL TL+G C
Sbjct: 185 FLPISLSLPAVGQGALAIECRESDDELRQLLHHVNDDETFETVMAERAFLHTLEGGC 241
>gi|357038812|ref|ZP_09100608.1| Porphobilinogen deaminase [Desulfotomaculum gibsoniae DSM 7213]
gi|355358905|gb|EHG06669.1| Porphobilinogen deaminase [Desulfotomaculum gibsoniae DSM 7213]
Length = 314
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+NGEI++AVHSMKD+PT L D + QRE
Sbjct: 66 ELALLNGEINMAVHSMKDLPTTLPDGLSIGAVCQREYPGDVLISRDDIQLADLKKGARIG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRK E + + A AG+K + E +T +
Sbjct: 126 TSSLRRRAQLLHYRPDLQMVDIRGNLNTRLRKFKELELDGIVLAYAGIKRMGYEEMITQL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D L AV QG++G+ S+D L SL+HE +R A+ ERAF+ L+G C
Sbjct: 186 IPFDICLPAVGQGSVGVEINSSDLATRDILASLDHETSRSAIEAERAFMKRLEGGC 241
>gi|402770869|ref|YP_006590406.1| porphobilinogen deaminase [Methylocystis sp. SC2]
gi|401772889|emb|CCJ05755.1| Porphobilinogen deaminase [Methylocystis sp. SC2]
Length = 309
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ ALI G ID+AVHS KD+PT+L + ++ L RE
Sbjct: 70 DSALIAGAIDLAVHSSKDLPTHLPSEIVIAGYLPREDARDAWISRGGLALDALPAGAVVG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RL+K+ G I ATL ALAGLK L + + T +
Sbjct: 130 TASLRRAAQVKRRRPDLETTLLRGNVETRLKKVENGEIDATLLALAGLKRLGLADRATAL 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +++ A QGAIG+ + D L L E T A+ ERAFL LDGSC
Sbjct: 190 LSLEEFPPACGQGAIGLTRRAGDDATRDLLAPLFDEATSFALAAERAFLAALDGSC 245
>gi|374299009|ref|YP_005050648.1| porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
gi|332551945|gb|EGJ48989.1| Porphobilinogen deaminase [Desulfovibrio africanus str. Walvis Bay]
Length = 316
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHSMKDVPT L + I+ +RE
Sbjct: 66 EEALLDGRADLAVHSMKDVPTELPEGLIIGVTPKREEPADALLSVRYDNLAALPEGAVIG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL +G A + A+AGL L ++ +
Sbjct: 126 TSSFRRQAQLLMRRPDFEIKMLRGNVNTRLRKLMDGEYDAIVLAMAGLNRLGLSAPKMEV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV+QG +GI +D ++A L ++H ETR V ER FL L+G C
Sbjct: 186 LGPPDFLPAVSQGVLGIEYRRDDAELADMLAFMDHPETRVRVQAERGFLTALEGGC 241
>gi|83855078|ref|ZP_00948608.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
gi|83842921|gb|EAP82088.1| porphobilinogen deaminase [Sulfitobacter sp. NAS-14.1]
Length = 317
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 84/178 (47%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
EE L+ G+IDIAVHSMKD+PT LL T LP
Sbjct: 75 EEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLAESAVVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL+KL +GV + T A+AGL L M
Sbjct: 135 TSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQH--VPA 192
Query: 75 LPIDD--MLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
PIDD ML AVAQGAIGI + D L +++ T Q + ERAFL TLDGSC
Sbjct: 193 TPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDGSC 250
>gi|337286240|ref|YP_004625713.1| porphobilinogen deaminase [Thermodesulfatator indicus DSM 15286]
gi|335359068|gb|AEH44749.1| porphobilinogen deaminase [Thermodesulfatator indicus DSM 15286]
Length = 309
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
E+AL+ EID+AVHSMKDVPT L L+ I+P
Sbjct: 66 EDALLREEIDLAVHSMKDVPTELPEGLEIAIIPERESPYDVVISQGGESIDDLPSGATVG 125
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RLRKLNEG+ A + A AGL L + E
Sbjct: 126 TSSLRRSAQLKAYRPDLKIENLRGNLDTRLRKLNEGLYHAIIVAQAGLIRLGLKEERAKP 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + ML A+ QGA+ I +D + + L L+HEET V ERAFL TL+G C
Sbjct: 186 ISPEIMLPAIGQGALAIEVRESDHDLKEGLSFLHHEETAICVAAERAFLATLEGGC 241
>gi|114770079|ref|ZP_01447617.1| porphobilinogen deaminase [Rhodobacterales bacterium HTCC2255]
gi|114548916|gb|EAU51799.1| porphobilinogen deaminase [alpha proteobacterium HTCC2255]
Length = 307
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 80/176 (45%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++ IDIAVHSMKD+P + L C L RE
Sbjct: 72 EDAMLDYGIDIAVHSMKDMPVICPEGLKLSCYLPREDVRDSFISTKYKNINELPKGATVG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKLNEGV +AT A AGL L E ++N
Sbjct: 132 TSSLRRRAQLLNKRPDLKIVEFRGNVQTRLRKLNEGVAEATFLACAGLNRLGRNE-ISNP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML A+AQG IGI D ++A+ L +N + + ER L LDGSC
Sbjct: 191 IEPDDMLPAIAQGCIGIEQREGDTEIAEILTKINDKSASLRLAAERTLLAELDGSC 246
>gi|83941602|ref|ZP_00954064.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
gi|83847422|gb|EAP85297.1| porphobilinogen deaminase [Sulfitobacter sp. EE-36]
Length = 317
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 84/178 (47%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTY----LLDKTILP-------------------------- 31
EE L+ G+IDIAVHSMKD+PT LL T LP
Sbjct: 75 EEDLLAGKIDIAVHSMKDMPTIQPGGLLLDTYLPREDPRDAFVAPTLSALDQLAEGAVVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL+KL +GV + T A+AGL L M
Sbjct: 135 TSSLRRRAQLLHQRPDLQVVEFRGNVQTRLKKLADGVAECTFLAVAGLNRLGMQH--VPA 192
Query: 75 LPIDD--MLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
PIDD ML AVAQGAIGI + D L +++ T Q + ERAFL TLDGSC
Sbjct: 193 TPIDDTLMLPAVAQGAIGIERRAGDLDTEAMLAAIHDTPTGQRLAAERAFLLTLDGSC 250
>gi|431806101|ref|YP_007233002.1| porphobilinogen deaminase [Liberibacter crescens BT-1]
gi|430800076|gb|AGA64747.1| Porphobilinogen deaminase [Liberibacter crescens BT-1]
Length = 311
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 78/175 (44%), Gaps = 47/175 (26%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
E L++ E+D+AVHS KD+ LLD L L RE
Sbjct: 72 EKLLSKELDLAVHSTKDMSAKLLDGLQLAACLPREDVRDVFISHKVKSLQDLPLNGVIGT 131
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
G ++ RLRKL G ATL A AGLK L+ T +T IL
Sbjct: 132 SSLRRQALLRRVRPDIQIVYFRGQIETRLRKLETGQADATLLAYAGLKRLHKTHVITEIL 191
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A QGAIGI D ++ + + ++NH ET A+ CER+F TLDGSC
Sbjct: 192 DQETFPPAPGQGAIGIEIRIGDTRVEELVSAINHPETWDAITCERSFFTTLDGSC 246
>gi|418402332|ref|ZP_12975846.1| porphobilinogen deaminase [Sinorhizobium meliloti CCNWSX0020]
gi|359503673|gb|EHK76221.1| porphobilinogen deaminase [Sinorhizobium meliloti CCNWSX0020]
Length = 309
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+PT L + L L RE
Sbjct: 69 EQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVDLPQGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGLK L M T +
Sbjct: 129 SSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLKRLGMEHVPTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ A AQGAI + D ++ L +++ T +AV CER FL TLDGSC
Sbjct: 189 LDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATLDGSC 244
>gi|251773212|gb|EES53764.1| porphobilinogen deaminase [Leptospirillum ferrodiazotrophum]
Length = 321
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEALI G ID+AVHSMKDVP +L + + L RE
Sbjct: 70 EEALIAGTIDLAVHSMKDVPAFLPEGLEIGAILSREDPRDAFVSNAYSSFSSLPPGARIG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+E I A + A AGL L ++ +
Sbjct: 130 TSSLRRMAQLKKRRPDLRFESLRGNVGTRLRKLDENQIDAIILAAAGLIRLGFSDRIREY 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L AV QGA+G+ C + D ++ L ++ ET V+ ER L LDG C
Sbjct: 190 LPVELSLPAVGQGALGLECRTGDHRIRTILARMHDPETTACVLAERGVLSALDGGC 245
>gi|416998579|ref|ZP_11939340.1| hydroxymethylbilane synthase [Veillonella parvula ACS-068-V-Sch12]
gi|333977477|gb|EGL78335.1| hydroxymethylbilane synthase [Veillonella parvula ACS-068-V-Sch12]
Length = 312
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 85/178 (47%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILP---- 31
EEA+ G+IDIAVHS+KD+PT L LDK LP
Sbjct: 66 EEAMHKGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDK--LPQGAR 123
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNVQ RL K+ + + A AGLK L + + +T
Sbjct: 124 VGTSSLRRQAQLLHARPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQIT 183
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+M+ AV QGA+ I C ++D +M L +N E TR AV ER+FL L+G C
Sbjct: 184 QVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGC 241
>gi|427413808|ref|ZP_18903999.1| porphobilinogen deaminase [Veillonella ratti ACS-216-V-Col6b]
gi|425715131|gb|EKU78125.1| porphobilinogen deaminase [Veillonella ratti ACS-216-V-Col6b]
Length = 312
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------LDKTILPCN-------------------- 33
E ++ G IDIAVHS+KD+PT L + K +PC+
Sbjct: 66 EASMREGSIDIAVHSLKDMPTDLPKGLTLGAITKREVPCDALVSPKYKTLDKLPQGAKVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GNVQ RLRKL E A + A AGLK L + + +T +
Sbjct: 126 TSSLRRQAQLLHHRPDLQINVLRGNVQTRLRKLEEENFDAIVLAQAGLKRLGLADQITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+++ AV QGA+ I C S+D++M L LN E+T ER+FL L G C
Sbjct: 186 FTADELIPAVGQGALAIECRSDDQEMLDMLAKLNDEDTMWCTRGERSFLRQLQGGC 241
>gi|220910316|ref|YP_002485627.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
gi|219866927|gb|ACL47266.1| porphobilinogen deaminase [Cyanothece sp. PCC 7425]
Length = 322
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ +++ E D AVHS+KD+PT+L D IL C +RE
Sbjct: 73 EQGMLSQETDFAVHSLKDLPTHLPDGLILGCITERENPADALVMNEKYRDRPLETLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L ++ +
Sbjct: 133 VIGTSSLRRLAQLRHYFPHLTFKDVRGNVNTRLAKLDAGEYDALVLAVAGLQRLGFSDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C S+D ++ + +L H+ T + ERAFL L+G C
Sbjct: 193 HQILPPEISLHAVGQGALGIECRSDDPEVLSLIKALEHQPTAWRCLAERAFLRELEGGC 251
>gi|374290881|ref|YP_005037916.1| hydroxymethylbilane synthase [Azospirillum lipoferum 4B]
gi|357422820|emb|CBS85662.1| hydroxymethylbilane synthase [Azospirillum lipoferum 4B]
Length = 312
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTILP-------------------------- 31
EEAL +G D+AVHSMKDVPT L D T+LP
Sbjct: 71 EEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFARSGGGLADLPAGAVVG 130
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GNVQ RL KL+ G + ATL ALAGL+ L +T+ +T +
Sbjct: 131 TAGLRRQAQVLELRPDLTVIPLRGNVQTRLSKLDAGEVDATLLALAGLRRLGLTDRITAV 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + ML AVAQGAIGI S D L LN ET V ERA L LDGSC
Sbjct: 191 LEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLSALDGSC 246
>gi|452853501|ref|YP_007495185.1| Porphobilinogen deaminase [Desulfovibrio piezophilus]
gi|451897155|emb|CCH50034.1| Porphobilinogen deaminase [Desulfovibrio piezophilus]
Length = 310
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
EEAL++G IAVHSMKDVPT L L+ ++P
Sbjct: 65 EEALLDGRAHIAVHSMKDVPTKLPDGLEVGVMPEREAATDSLLSVKYDGLKGLPEGALVG 124
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ R+RKL +G A + A AGL L ++ I
Sbjct: 125 TSSLRRQSQLAALRPDLRIESLRGNLDTRVRKLIDGEFDAIVVATAGLNRLELSAPKHEI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AVAQGA+GI +++ ++ + L LNHE T+Q V+ ER FL LDG C
Sbjct: 185 LGPPDFLPAVAQGALGIEYDTSNTEVVEMLQFLNHEPTKQQVMAERGFLTGLDGGC 240
>gi|81299776|ref|YP_399984.1| porphobilinogen deaminase [Synechococcus elongatus PCC 7942]
gi|161621822|ref|YP_171285.2| porphobilinogen deaminase [Synechococcus elongatus PCC 6301]
gi|123755408|sp|Q31PM2.1|HEM3_SYNE7 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81168657|gb|ABB56997.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 7942]
Length = 320
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ GE+D AVHS+KD+PT L + IL C +RE
Sbjct: 70 EVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGT 129
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L+M + +
Sbjct: 130 VIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRI 189
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P L AV QGA+GI C + D ++ + L +L HE T Q + ERAFL L+G C
Sbjct: 190 HQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGC 248
>gi|302038053|ref|YP_003798375.1| porphobilinogen deaminase [Candidatus Nitrospira defluvii]
gi|300606117|emb|CBK42450.1| Porphobilinogen deaminase [Candidatus Nitrospira defluvii]
Length = 310
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
E+AL++ EID+AVHSMKDVPT L LD +P
Sbjct: 67 EDALLSKEIDLAVHSMKDVPTALPEGLDILCVPPREDPRDALITRDGCRLDQLKPGAKIG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RLRKL EG A + A AGL+ L +T
Sbjct: 127 TSSLRRQAQLLHYRPDFTIEMLRGNLDTRLRKLREGQFDAIVLAAAGLRRLAWDAEITEY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+ L A+AQGA+GI S+D + + L H TR V ERA L L+G C
Sbjct: 187 LPVHLSLPAIAQGALGIEARSDDTFVRELLSRFEHRPTRITVTAERALLHRLEGGC 242
>gi|253699058|ref|YP_003020247.1| porphobilinogen deaminase [Geobacter sp. M21]
gi|259647798|sp|C6DYY8.1|HEM3_GEOSM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251773908|gb|ACT16489.1| porphobilinogen deaminase [Geobacter sp. M21]
Length = 318
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 78/175 (44%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVKFADLPQGARIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNVQ R+ KL + A + A AGL L + +T +L
Sbjct: 127 SALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLGFADQITELL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D L A+ QGA+GI C +++ + + NH +T +AV ERA L +G C
Sbjct: 187 PTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRCEGGC 241
>gi|56685543|dbj|BAD78765.1| hydroxymethylbilane synthase [Synechococcus elongatus PCC 6301]
Length = 300
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ GE+D AVHS+KD+PT L + IL C +RE
Sbjct: 50 EVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGT 109
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L+M + +
Sbjct: 110 VIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRI 169
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P L AV QGA+GI C + D ++ + L +L HE T Q + ERAFL L+G C
Sbjct: 170 HQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGC 228
>gi|411118701|ref|ZP_11391081.1| hydroxymethylbilane synthase [Oscillatoriales cyanobacterium
JSC-12]
gi|410710564|gb|EKQ68071.1| hydroxymethylbilane synthase [Oscillatoriales cyanobacterium
JSC-12]
Length = 326
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++NG+ID AVHS+KD+PT L + +L C +RE
Sbjct: 77 EVGMLNGDIDFAVHSLKDLPTRLPEGLMLGCVTERENPADALVVHANHKDKQLETLPAGA 136
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L+M + +
Sbjct: 137 VIGTSSLRRLAQLRHYFPHLSFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLDMADRI 196
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+D ++ L +LNH T ERAFL L+G C
Sbjct: 197 HQIIPAEISLHAVGQGALGIECRSDDSEILTLLKALNHPPTAYRCYAERAFLRELEGGC 255
>gi|408376379|ref|ZP_11173984.1| porphobilinogen deaminase [Agrobacterium albertimagni AOL15]
gi|407749846|gb|EKF61357.1| porphobilinogen deaminase [Agrobacterium albertimagni AOL15]
Length = 309
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+PT L + L L RE
Sbjct: 69 EDQLLSGDLDFAVHSSKDMPTKLPEGLFLSAYLPREDVRDAVVGRTAPTLKDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL +G + ATL A AGLK L E T +
Sbjct: 129 SSSLRRQALIRRIRPDINVITFRGLVDTRLRKLADGEVDATLLAFAGLKRLGKPEIPTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D ++ L ++N +T AV CERAFLG LDGSC
Sbjct: 189 LDPSEFPPAPAQGAICIESRIGDTRVNDLLDAINDRDTFDAVSCERAFLGALDGSC 244
>gi|126732359|ref|ZP_01748159.1| porphobilinogen deaminase [Sagittula stellata E-37]
gi|126707228|gb|EBA06294.1| porphobilinogen deaminase [Sagittula stellata E-37]
Length = 316
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 82/178 (46%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G IDIAVHSMKD+PT + IL C L RE
Sbjct: 77 EEALVAGRIDIAVHSMKDMPTEQPEGLILDCYLPREDPRDAFICHDHGSIHDLPVGAVVG 136
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL+KL++GV AT A AGL + + +
Sbjct: 137 SSSLRRRAQLLHRRPDLDVVEFRGNLQTRLKKLSDGVATATFLACAGLNRMKIPG--VPM 194
Query: 75 LPID--DMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
PI DML A+AQGAIGI +D + L +++ +T + ERAFL LDGSC
Sbjct: 195 FPIAEVDMLPAIAQGAIGIERRIDDATTQEMLAAIHDHDTGLRLAAERAFLARLDGSC 252
>gi|119511003|ref|ZP_01630124.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
gi|119464348|gb|EAW45264.1| porphobilinogen deaminase [Nodularia spumigena CCY9414]
Length = 323
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------LDKTI--LPC-- 32
E ++N EID AVHS+KD+PT L DK I LP
Sbjct: 73 EVGMLNQEIDFAVHSLKDLPTNLPSGLTLAVITERENPADALVVHDKYKDKQIETLPAGA 132
Query: 33 -----NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
+L+R GN+ RL+KL+ G A + A AGL+ L M++ +
Sbjct: 133 VIGTSSLRRLAQLRNKFPHFTFKDVRGNLNTRLKKLDSGEYDALILAAAGLERLGMSDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C ++DK++ L ++ H ETR + ERAFL L+G C
Sbjct: 193 HQILPKEISLHAVGQGALGIECRADDKEIINILKAIEHSETRDRCLAERAFLRILEGGC 251
>gi|15966832|ref|NP_387185.1| porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|334317834|ref|YP_004550453.1| porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|384530958|ref|YP_005715046.1| porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
gi|384537673|ref|YP_005721758.1| probabable porphobilinogen deaminase protein [Sinorhizobium
meliloti SM11]
gi|407722144|ref|YP_006841806.1| porphobilinogen deaminase [Sinorhizobium meliloti Rm41]
gi|433614907|ref|YP_007191705.1| porphobilinogen deaminase [Sinorhizobium meliloti GR4]
gi|23821697|sp|Q92LH7.1|HEM3_RHIME RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|15076104|emb|CAC47658.1| Probable porphobilinogen deaminase [Sinorhizobium meliloti 1021]
gi|333813134|gb|AEG05803.1| Porphobilinogen deaminase [Sinorhizobium meliloti BL225C]
gi|334096828|gb|AEG54839.1| Porphobilinogen deaminase [Sinorhizobium meliloti AK83]
gi|336034565|gb|AEH80497.1| probabable porphobilinogen deaminase protein [Sinorhizobium
meliloti SM11]
gi|407320376|emb|CCM68980.1| porphobilinogen deaminase [Sinorhizobium meliloti Rm41]
gi|429553097|gb|AGA08106.1| porphobilinogen deaminase [Sinorhizobium meliloti GR4]
Length = 309
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+PT L + L L RE
Sbjct: 69 EQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVDLPQGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGL+ L M T +
Sbjct: 129 SSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLGMEHVPTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ A AQGAI + D ++ L +++ T +AV CER FL TLDGSC
Sbjct: 189 LDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATLDGSC 244
>gi|269798482|ref|YP_003312382.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282849932|ref|ZP_06259315.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
gi|269095111|gb|ACZ25102.1| porphobilinogen deaminase [Veillonella parvula DSM 2008]
gi|282580369|gb|EFB85769.1| hydroxymethylbilane synthase [Veillonella parvula ATCC 17745]
Length = 312
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 85/178 (47%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILP---- 31
EEA+ G+IDIAVHS+KD+PT L LDK LP
Sbjct: 66 EEAMHAGDIDIAVHSLKDMPTELPEGLTLGAISAREVPYDALVSPVYKTLDK--LPQGAR 123
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNVQ RL K+ + + A AGLK L + + +T
Sbjct: 124 VGTSSLRRQAQLLHVRPDLKVEVIRGNVQTRLSKIETEKLDGVILAQAGLKRLGLEDQIT 183
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+M+ AV QGA+ I C ++D +M L +N E TR AV ER+FL L+G C
Sbjct: 184 QVFKADEMIPAVGQGALAIECRADDTEMLDMLDPINDEATRYAVEGERSFLRQLNGGC 241
>gi|402489843|ref|ZP_10836636.1| porphobilinogen deaminase [Rhizobium sp. CCGE 510]
gi|401811182|gb|EJT03551.1| porphobilinogen deaminase [Rhizobium sp. CCGE 510]
Length = 309
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ GE+D AVHS KD+ T L + L L RE
Sbjct: 69 EQKLVAGELDFAVHSAKDIATKLPEGLYLSAYLPREDIRDAVIGRTARKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L E +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGQVDATLLALAGLKRLGKVEVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D ++ L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDTRIDDLLAPVNDAATFDTVSCERAFLAALDGSC 244
>gi|172039291|ref|YP_001805792.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
gi|354552441|ref|ZP_08971749.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51472]
gi|171700745|gb|ACB53726.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51142]
gi|353555763|gb|EHC25151.1| porphobilinogen deaminase [Cyanothece sp. ATCC 51472]
Length = 331
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A++ ++D AVHS+KD+PT L + +L C +R
Sbjct: 83 ETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVNETHQDKQLDTLPEGS 142
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L+M++ +
Sbjct: 143 VIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLDMSDRI 202
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C S D ++ L L H ETR ERAFL L+G C
Sbjct: 203 HQVIPDDISLHAVGQGALGIECRSGDPEILDLLKVLEHTETRDRCYAERAFLRQLEGGC 261
>gi|456014402|gb|EMF48017.1| Porphobilinogen deaminase [Planococcus halocryophilus Or1]
Length = 309
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID AVHSMKD+P+ L + + C +RE
Sbjct: 65 EQALFEREIDFAVHSMKDMPSVLPEGLAIGCIPEREDPRDAYIANDHVKLLDLPVGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL G A + A AGLK + ++ VT
Sbjct: 125 TSSLRRSSQLLLLRPDLDIQWIRGNIDTRLAKLQAGDFDAIILAAAGLKRMGWKDDLVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ L A+ QG++GI C D ++ L LNHE+T AV ER FL +DGSC
Sbjct: 185 FLEVDECLPAIGQGSLGIECRVEDTELLSELAKLNHEDTALAVNAERKFLKDMDGSC 241
>gi|337288992|ref|YP_004628464.1| Porphobilinogen deaminase [Thermodesulfobacterium sp. OPB45]
gi|334902730|gb|AEH23536.1| Porphobilinogen deaminase [Thermodesulfobacterium geofontis OPF15]
Length = 305
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 79/175 (45%), Gaps = 47/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ GEID A+HSMKDVP+ + + + C QRE
Sbjct: 64 EEALLRGEIDFAIHSMKDVPSLIPEGLEIACIPQRESPFDVWISNYKDILELPSYSKIGT 123
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV RLRK EG + A AGLK L + E L
Sbjct: 124 SSLRRLSQLKKLRKDLEILPLRGNVDTRLRKWKEGQFDGIILAEAGLKRLGI-EISYKRL 182
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I++M+ AV QGA+GI +DKK+ + L ++ E T + ER FL TL+G C
Sbjct: 183 TIEEMVPAVGQGALGIEIRKDDKKLKEMLSKIHSETTAICIKVERTFLKTLEGGC 237
>gi|254452699|ref|ZP_05066136.1| porphobilinogen deaminase [Octadecabacter arcticus 238]
gi|198267105|gb|EDY91375.1| porphobilinogen deaminase [Octadecabacter arcticus 238]
Length = 321
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G IDIAVHS KD+P D +L L RE
Sbjct: 79 EEAMLAGRIDIAVHSTKDMPVAQPDGLVLNVFLPREDARDAFVSVKYAGIADLPEGAIVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +G+ AT A+AGL + M +
Sbjct: 139 TSSLRRRAQLLVKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMGMHDAAIGA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DDML A+AQG I I +D + L ++++ + Q + ERAFL LDGSC
Sbjct: 199 IDLDDMLPAIAQGTISIERRVDDLRARDMLAAIHNVQAGQQMAAERAFLAALDGSC 254
>gi|86158914|ref|YP_465699.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775425|gb|ABC82262.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 314
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+N + ++AVHSMKD+P L +L QRE
Sbjct: 63 EDALLNRDAEVAVHSMKDLPAVLAPGLVLASVPQREDPRDALCSPRWKTLAALPKGARVG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK +EG + A + A AGL+ L + E+ T +
Sbjct: 123 TSSLRRSAQLKALRPDLQMEVVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHATYV 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P ++ML AVAQGA+ + ++D K L +L ETR + ER FL ++G C
Sbjct: 182 FPPEEMLPAVAQGALALEARADDAPTLKRLAALEDPETRVRIEAERGFLARIEGGC 237
>gi|299535618|ref|ZP_07048939.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
gi|424739014|ref|ZP_18167439.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZB2]
gi|298728818|gb|EFI69372.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZC1]
gi|422947102|gb|EKU41502.1| porphobilinogen deaminase [Lysinibacillus fusiformis ZB2]
Length = 310
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P L D ++ C RE
Sbjct: 65 EQALYDKEIDFAVHSMKDMPAVLPDGLVIGCIPPREDARDAFISKGHVKFADLPAGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RL KL A + A AGLK L +++V T
Sbjct: 125 TSSLRRSAQLLTVRPDIEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSDDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L AVAQG++GI C ++D ++ LG L T Q ERAFL +DG C
Sbjct: 185 FLPVEQCLPAVAQGSLGIECRADDAELLAELGKLTDSFTWQEAHAERAFLAAMDGGC 241
>gi|323141796|ref|ZP_08076663.1| hydroxymethylbilane synthase [Phascolarctobacterium succinatutens
YIT 12067]
gi|322413719|gb|EFY04571.1| hydroxymethylbilane synthase [Phascolarctobacterium succinatutens
YIT 12067]
Length = 306
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------------LDKTIL 30
EE L++G +D+AVHS+KD+PT L L +
Sbjct: 66 EEDLLDGTVDLAVHSLKDMPTVLPEGLCLTAITERANVGDAFVSNKYATFEELPLGSVVG 125
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RLRKL+EG+ A + A AGL+ L + ++++
Sbjct: 126 TSSLRRKAQLLAKRPDLEIRDLRGNVDTRLRKLDEGLYDAIILAAAGLERLGHGDRISSL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D L AV QGA+ I + DK++ L LN T+QA ERAFLG L+G C
Sbjct: 186 IPADVCLPAVGQGALAIEARTADKEVRDMLSFLNDLNTKQATDAERAFLGLLEGGC 241
>gi|212703312|ref|ZP_03311440.1| hypothetical protein DESPIG_01355 [Desulfovibrio piger ATCC 29098]
gi|212673272|gb|EEB33755.1| hydroxymethylbilane synthase [Desulfovibrio piger ATCC 29098]
Length = 311
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHS+KDVP L + +L C QRE
Sbjct: 66 EEALLDGSADLAVHSIKDVPMVLPEGLVLGCVPQREICVDCLLSNRYGSLDELPPGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRK+ EG A + A AGLK L ++ + +
Sbjct: 126 TSSLRRQAQLLNLRPDLEILSLRGNVDTRLRKMKEGEYDAIVLASAGLKRLGLSADRMHH 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ AV QGA+GI C +D ++ + L + H TR V ER FL LDG C
Sbjct: 186 FEAASFVPAVGQGALGIECRGDDGEVLELLSRMEHRPTRICVEAERGFLAGLDGGC 241
>gi|399039642|ref|ZP_10735151.1| porphobilinogen deaminase [Rhizobium sp. CF122]
gi|398062055|gb|EJL53836.1| porphobilinogen deaminase [Rhizobium sp. CF122]
Length = 309
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L +G++DIAVHS KD+PT L + L L RE
Sbjct: 69 EQQLASGDLDIAVHSAKDMPTRLPEGLCLSAYLPREDVRDAVIGRTAPKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG + ATL ALAGLK L + +T+I
Sbjct: 129 SSSLRRQALIRRLRPDINVITFRGLVDTRLRKLQEGEVDATLLALAGLKRLGKVDVITDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ A AQGAI I + ++ L +N T AV CERAFL LDGSC
Sbjct: 189 LAVETFPPAPAQGAICIESRIGNARIDDLLAPINDAATFDAVSCERAFLTALDGSC 244
>gi|222054398|ref|YP_002536760.1| porphobilinogen deaminase [Geobacter daltonii FRC-32]
gi|254800252|sp|B9M416.1|HEM3_GEOSF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|221563687|gb|ACM19659.1| porphobilinogen deaminase [Geobacter daltonii FRC-32]
Length = 318
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 78/175 (44%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G+IDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGTKFADLPQGAKIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+ KL + A + A AGLK L TE V L
Sbjct: 127 SALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLGFTEKVAEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D + A+ QGA+GI C +++++ + + NH T AV ERA L +G C
Sbjct: 187 PTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRCEGGC 241
>gi|114705601|ref|ZP_01438504.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
gi|114538447|gb|EAU41568.1| porphobilinogen deaminase [Fulvimarina pelagi HTCC2506]
Length = 316
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ ID+AVHS KD+ T + D + L+RE
Sbjct: 71 EAALLDRRIDLAVHSSKDMATAIPDGLAITAFLEREDVRDAFIGRDAKTLADLPEGATVG 130
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG ATL ALAGL + M + T+I
Sbjct: 131 SASLRRQALIKRLRPDLNTIIFRGNVQTRLRKLGEGQADATLLALAGLNRMEMQHHATDI 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D A QGAI I D ++ + ++ H+ET A+ ERAFL LDGSC
Sbjct: 191 LEPEDFPPAPGQGAICIESRQGDTRIENLVSAIVHDETSIALHAERAFLKVLDGSC 246
>gi|392380569|ref|YP_005029765.1| hydroxymethylbilane synthase [Azospirillum brasilense Sp245]
gi|356875533|emb|CCC96269.1| hydroxymethylbilane synthase [Azospirillum brasilense Sp245]
Length = 308
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 87/176 (49%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTILP-------------------------- 31
E+AL++G D+AVHSMKDVPT++ D T+LP
Sbjct: 70 EDALLDGRADLAVHSMKDVPTWMPDGLEISTLLPREDTRDAFFSRGGHTVDTLPAGSVVG 129
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GNVQ+RL KL G + ATL ALAGL+ L +T+ +T +
Sbjct: 130 TAGLRRQAQILERRPDLTVVPFRGNVQSRLAKLEAGEVDATLLALAGLRRLGLTDRITAV 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ML AVAQGAIGI S D L LN T V ERA L LDGSC
Sbjct: 190 LEHEEMLPAVAQGAIGIEIRSADDSTRALLAPLNCAATTARVTAERALLAMLDGSC 245
>gi|56461658|ref|YP_156939.1| porphobilinogen deaminase [Idiomarina loihiensis L2TR]
gi|61213262|sp|Q5QUS3.1|HEM3_IDILO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56180668|gb|AAV83390.1| Porphobilinogen deaminase [Idiomarina loihiensis L2TR]
Length = 313
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKD+P TI LP
Sbjct: 66 EVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGAVVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R GNVQ RLRKL+EG A + A +GL L + + +T+
Sbjct: 126 TCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLELGDRITSF 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++ L A QGA+GI C S+D +M L L +ETR V+ ERA LDG C
Sbjct: 186 IPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGGC 241
>gi|289548019|ref|YP_003473007.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
gi|289181636|gb|ADC88880.1| porphobilinogen deaminase [Thermocrinis albus DSM 14484]
Length = 300
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 49/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G+ID+AVHS+KDVPT L D L +RE
Sbjct: 62 EEALLRGDIDVAVHSLKDVPTKLPDGLTLGAITERELPYDVLISRDGQRLENLPTGAVVG 121
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL+EG A + A AG++ + + I
Sbjct: 122 TSSLRRKVQIKRMRRDLVIKDLRGNVDTRIRKLDEGQYDAIVLAYAGIRRMGWENRIVQI 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D + AV QG++ + +D+K+ + + L+H E+R V ERAFL ++G C
Sbjct: 182 L--EDFIPAVGQGSMAVEIREDDEKIREVISLLDHRESRIRVEAERAFLEVMEGGC 235
>gi|410687061|ref|YP_006965196.1| porphobilinogen deaminase [Sulfitobacter guttiformis]
gi|399920003|gb|AFP55407.1| porphobilinogen deaminase [Sulfitobacter guttiformis]
Length = 314
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E LI +IDIAVHSMKD+PT + IL L RE
Sbjct: 75 EADLITNKIDIAVHSMKDMPTLQPEGLILETYLPREDVRDAFISPTAKSLADLPAGTVVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q RL KL +GV AT A+AGL+ L M +
Sbjct: 135 TSSLRRRAQLMLKRSDLEVVEFRGNLQTRLMKLEQGVAAATFLAMAGLRRLKMDDVPHTA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ML AVAQGAIGI +D +A+ L +++H T + ER+FL LDGSC
Sbjct: 195 IETDVMLPAVAQGAIGIERRVDDLNVAEMLEAIHHIPTGHRLAAERSFLLELDGSC 250
>gi|282901179|ref|ZP_06309108.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
gi|281193879|gb|EFA68847.1| Porphobilinogen deaminase [Cylindrospermopsis raciborskii CS-505]
Length = 322
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 72 ELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVFHQNHLGQTLATLPPGS 131
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ R+ KL+ G A + A+AGL+ LNM +
Sbjct: 132 VIGTSSLRRLAQLRHKFPHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLNMHHRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP D L AV QGA+GI C ND ++ L ++ H +TR + ER+FL +L+G C
Sbjct: 192 HEILPPDISLHAVGQGALGIECRENDLELITILKAIEHPQTRDRCLAERSFLRSLEGGC 250
>gi|343513144|ref|ZP_08750254.1| porphobilinogen deaminase [Vibrio scophthalmi LMG 19158]
gi|342793724|gb|EGU29513.1| porphobilinogen deaminase [Vibrio scophthalmi LMG 19158]
Length = 312
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYNNIDELPQGSVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQIKERRPDIIIKDLRGNVGTRLSKLDAGEYDAIVLAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 MEAEESLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|188996629|ref|YP_001930880.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931696|gb|ACD66326.1| porphobilinogen deaminase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 310
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ EIDIAVHS+KDVPT L + L +RE
Sbjct: 63 EDALLRNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIRYENIYQLPENTVIG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG A + A AGLK L + V I
Sbjct: 123 TSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSKVKYI 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QG + I S+D+++ + LNH E+ ER+FL TL+G C
Sbjct: 183 FSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238
>gi|392549365|ref|ZP_10296502.1| porphobilinogen deaminase [Pseudoalteromonas rubra ATCC 29570]
Length = 312
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LPC----- 32
E+A++ G DIAVHSMKDVP D TI LP
Sbjct: 69 EQAMLEGRADIAVHSMKDVPVDFPDGLELHTICEREDPRDAFVSNRYQSLSELPAGAVVG 128
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L M E + +
Sbjct: 129 TSSLRRQCQIRAQRPDLVIKDLRGNVNTRLAKLDAGEFDAIILAAAGLIRLEMAERIASF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++D L A QGA+GI C S+D ++ +L L H ETR V+ ERA L+G C
Sbjct: 189 VRVEDSLPANGQGAVGIECRSDDAQVQAWLAPLEHSETRMRVLAERAMNRRLEGGC 244
>gi|254424552|ref|ZP_05038270.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
gi|196192041|gb|EDX87005.1| porphobilinogen deaminase [Synechococcus sp. PCC 7335]
Length = 319
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ +++ +D AVHS+KD+PT L + +L C +RE
Sbjct: 71 EDDMLSHRVDFAVHSLKDLPTQLPEGLMLGCVTEREDPADALVVHEKHKDKQLDTLPEGA 130
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RLRKL+EG A + A AGL L+M++ +
Sbjct: 131 VIGTSSLRRLAQLRHHFPHFQFKDIRGNVNTRLRKLDEGEYDAIVLAAAGLNRLDMSDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C S D+ + + +L H T Q ERAFL L+G C
Sbjct: 191 HQLLPAEISLHAVGQGALGIECRSGDEDILTVIKALEHLPTAQRCYAERAFLRELEGGC 249
>gi|167630035|ref|YP_001680534.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
gi|167592775|gb|ABZ84523.1| porphobilinogen deaminase [Heliobacterium modesticaldum Ice1]
Length = 315
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD-------------KTIL------------------ 30
E A++NGEID+AVHSMKD+PT L + + IL
Sbjct: 69 EVAMLNGEIDMAVHSMKDLPTLLPEGCAIGAICVREDCRDILISRNGGGLEELPRGAKVG 128
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q R+RK+ E + + A AG+K L E +T
Sbjct: 129 TASLRRKAQIWKVRPDLELVDIRGNLQTRMRKMEEQNLDGLILAAAGVKRLGWAEKITEY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D L AV QG++GI D+ + + + +LNH E+ V ERA L TL+G C
Sbjct: 189 IPVDMCLPAVGQGSVGIEIREGDEAIGRLVAALNHAESALCVRAERALLRTLEGGC 244
>gi|291279209|ref|YP_003496044.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
gi|290753911|dbj|BAI80288.1| porphobilinogen deaminase [Deferribacter desulfuricans SSM1]
Length = 305
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 83/178 (46%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILPC-------------------------- 32
EE L+N +DIAVHSMKDVP L L+ + P
Sbjct: 64 EEELLNKNVDIAVHSMKDVPVELPDGLEVGVFPVREEPYDAFLSVKYNSLDELPDGAVIG 123
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV R+RKL EG A + A AGLK L + E+V
Sbjct: 124 TSSLRRKIQLMRKYPHLVIKDLRGNVDTRIRKLTEGQYDAIILAKAGLKRLGLLEHVKQT 183
Query: 75 LPIDDMLL--AVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IDD L+ AV QG +GI +D+ + K +G LNHEET ERAFL L+G C
Sbjct: 184 --IDDTLMIPAVCQGTLGIEYREDDQDVQKVIGFLNHEETVFRTKAERAFLKRLEGGC 239
>gi|282895464|ref|ZP_06303601.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
gi|281199497|gb|EFA74360.1| Porphobilinogen deaminase [Raphidiopsis brookii D9]
Length = 322
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------LDKTI--LP--- 31
E +IN EID AVHS+KD+PT L L +T+ LP
Sbjct: 72 ELGMINQEIDFAVHSLKDLPTNLPAGLTLAAITARENPADAVVFHQNHLGQTLDTLPPGS 131
Query: 32 ----CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
+L+R GN+ R+ KL+ G A + A+AGL+ LNM +
Sbjct: 132 VIGTSSLRRLAQLRHKFSHFTFKDVRGNLNTRMTKLDAGEYDALILAVAGLERLNMHHRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP D L AV QGA+GI C ND ++ L ++ H +TR + ER+FL +L+G C
Sbjct: 192 HQILPPDISLHAVGQGALGIECRENDSELITILKAIEHPQTRDRCLAERSFLRSLEGGC 250
>gi|218246829|ref|YP_002372200.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
gi|218167307|gb|ACK66044.1| porphobilinogen deaminase [Cyanothece sp. PCC 8801]
Length = 320
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A+ ++D+AVHS+KD+PT L IL C +R
Sbjct: 71 EVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNKKHLDKQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL+KL+EG A + A+AGL+ L+M++ +
Sbjct: 131 VIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRLDMSDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D+++ L L HE TR ERAFL L+G C
Sbjct: 191 HQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRELEGGC 249
>gi|257059870|ref|YP_003137758.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
gi|256590036|gb|ACV00923.1| porphobilinogen deaminase [Cyanothece sp. PCC 8802]
Length = 320
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A+ ++D+AVHS+KD+PT L IL C +R
Sbjct: 71 EVAMEQNQVDLAVHSLKDLPTNLPTGLILGCVTERVDPADALVVNQKHLDKQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL+KL+EG A + A+AGL+ L+M++ +
Sbjct: 131 VIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLKKLDEGEYDAIILAVAGLQRLDMSDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D+++ L L HE TR ERAFL L+G C
Sbjct: 191 HQVIPSEISLHAVGQGALGIECREGDEEVLALLKVLEHEPTRDRCYAERAFLRELEGGC 249
>gi|343513425|ref|ZP_08750528.1| porphobilinogen deaminase [Vibrio sp. N418]
gi|342802218|gb|EGU37658.1| porphobilinogen deaminase [Vibrio sp. N418]
Length = 312
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYNNIDELPQGSVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQIKERRPDIIIKDLRGNVGTRLGKLDAGEYDAIVLAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 MEAEESLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|261250035|ref|ZP_05942612.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417956130|ref|ZP_12599123.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260939539|gb|EEX95524.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342811204|gb|EGU46255.1| porphobilinogen deaminase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 312
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHNIDELPQGAIVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDDGQYDAIILAAAGLKRLELEERIKSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH+ET V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLTLEGGC 243
>gi|381160550|ref|ZP_09869782.1| porphobilinogen deaminase [Thiorhodovibrio sp. 970]
gi|380878614|gb|EIC20706.1| porphobilinogen deaminase [Thiorhodovibrio sp. 970]
Length = 308
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ +++G+ DIAVHSMKDVP + L L+RE
Sbjct: 66 EQGMLDGDADIAVHSMKDVPVGFPEGLHLAAILERENPHDAFVSNSFASIDALPQGACVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++GV A + A AGL L E + +
Sbjct: 126 TSSLRRECQLAARRPDLRIEPLRGNVNTRLAKLDDGVYDAIILAAAGLIRLEFGERIRAV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L A+ QGAIGI C S D+++ + L+H+ T + V+ ERA LDG C
Sbjct: 186 MPPEESLPAIGQGAIGIECRSMDERVNALIAPLHHQNTAERVLAERAMNERLDGGC 241
>gi|155241760|gb|ABT18042.1| porphobilinogen deaminase [Heliobacillus mobilis]
Length = 314
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK-TI----------------------LP------- 31
E +++ GEID+AVHS+KD+PT L + TI LP
Sbjct: 69 EVSMLEGEIDMAVHSLKDLPTVLPEGLTIGAMCVREDCRDILISRHGGLDALPQGARVGT 128
Query: 32 CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
+L+R+ GN+Q RLRK+ E + + A AG+ L E ++ +
Sbjct: 129 ASLRRKAQIWQVRPDLELLDIRGNLQTRLRKMEEQNLDGLILAAAGVIRLGWAEKISQYI 188
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P+D L AV QG+IGI D ++AK +G+LNH ET ++ ERA + TL+G C
Sbjct: 189 PVDMCLPAVGQGSIGIEIREGDDEIAKIVGALNHYETSVSIRAERALMRTLEGGC 243
>gi|409196710|ref|ZP_11225373.1| porphobilinogen deaminase [Marinilabilia salmonicolor JCM 21150]
Length = 307
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKT----ILP-------------------------- 31
E AL++G +D+AVHS+KD+PT L + +LP
Sbjct: 67 EHALLDGTVDVAVHSLKDLPTLLPEGLRLGGVLPRGEVRDVLVSCDGRGLNELTSADKIG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RLRK+ EG A + A AG L + E +T
Sbjct: 127 TSSLRRQAQLLHFNPHLQVVDIRGNVNTRLRKMQEGHCDAMIMAGAGFIRLGLEERITEF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ ML AV+QGA+ + ND +MA+ + + ET ERAFL T++G C
Sbjct: 187 LPVEIMLPAVSQGAVAMEIRDNDPEMAEIINQITDPETLLTTTAERAFLTTIEGGC 242
>gi|253575681|ref|ZP_04853017.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845019|gb|EES73031.1| porphobilinogen deaminase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 320
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A++NGEID+AVHSMKD+P+ L D + LP
Sbjct: 71 EQAMLNGEIDLAVHSMKDMPSVLPDGLMNGAVPRRVDPRDALISRNGRSLDELPQGAKVG 130
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +RLRKL E A + A AGL + +T
Sbjct: 131 TSSLRRASQLRAYRPDFVLEPIRGNIDSRLRKLEEEGFDAIILAAAGLFRMGWEHRITAF 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D ++ + L N +T V ER FLG L+G C
Sbjct: 191 LPAEVCLPAVGQGALGIECREDDDEVRRLLSLYNDPDTAVTVAAERRFLGVLNGGC 246
>gi|121997816|ref|YP_001002603.1| porphobilinogen deaminase [Halorhodospira halophila SL1]
gi|229836112|sp|A1WVT9.1|HEM3_HALHL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|121589221|gb|ABM61801.1| hydroxymethylbilane synthase [Halorhodospira halophila SL1]
Length = 310
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL------------------------DKTILP------ 31
E+ ++ GE D+AVHSMKD+P L D LP
Sbjct: 67 EDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDELPHGARVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RLRKL++GV A + A +GL L +T +
Sbjct: 127 TASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLELTHRIAGR 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C D+++ K + LNHE TR + ER L+GSC
Sbjct: 187 LTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARLEGSC 242
>gi|254414246|ref|ZP_05028013.1| porphobilinogen deaminase [Coleofasciculus chthonoplastes PCC 7420]
gi|196178921|gb|EDX73918.1| porphobilinogen deaminase [Coleofasciculus chthonoplastes PCC 7420]
Length = 321
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N EID+AVHS+KD+PT L + +L C +RE
Sbjct: 73 EVGMLNQEIDLAVHSLKDLPTALPEGLVLGCVTERENPADALVLHAKHQGKQLDTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGLK L+M++ +
Sbjct: 133 VIGTSSLRRLAQLRYHFPHFTFKDIRGNLNTRLGKLDAGEFDALILAAAGLKRLDMSDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C +D ++ L ++ H T Q ERAFL L+G C
Sbjct: 193 HQVIPSEISLHAVGQGALGIECRGDDPEILDVLKAIEHSPTAQRCYAERAFLRELEGGC 251
>gi|91789512|ref|YP_550464.1| porphobilinogen deaminase [Polaromonas sp. JS666]
gi|91698737|gb|ABE45566.1| porphobilinogen deaminase [Polaromonas sp. JS666]
Length = 334
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G D+AVHS+KDVP L D L C L+RE
Sbjct: 76 EVALSEGRADLAVHSLKDVPMDLPDGFALACVLEREDPHDAFVSNQFASLADLPQGAVVG 135
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG A + A AGLK L + + I
Sbjct: 136 TSSLRRLVLLKALRPDLNIEPLRGNLDTRLRKLDEGHYHAIVLAAAGLKRLGLQARIRGI 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DDML A QGA+GI ++ + + LG+L H+ T AV ER + GSC
Sbjct: 196 FAPDDMLPAAGQGALGIEVRADRHDLMQALGTLAHQPTWLAVTAERTVSRAMGGSC 251
>gi|237756363|ref|ZP_04584911.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691477|gb|EEP60537.1| porphobilinogen deaminase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 310
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ EIDIAVHS+KDVPT L + L +RE
Sbjct: 63 EDALLKNEIDIAVHSLKDVPTVLPEGLELIAITEREDPRDAFLSIKHEHIYQLPENAVIG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG A + A AGLK L + V I
Sbjct: 123 TSSLRRKSQIMKIRKDLQIKDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDGKVKYI 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QG + I S+D+++ + LNH E+ ER+FL TL+G C
Sbjct: 183 FSPDEMIPAVCQGFLAIEGRSDDERIKNLIKPLNHYESYLRATAERSFLKTLEGGC 238
>gi|429760796|ref|ZP_19293257.1| hydroxymethylbilane synthase [Veillonella atypica KON]
gi|429176704|gb|EKY18069.1| hydroxymethylbilane synthase [Veillonella atypica KON]
Length = 312
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A+ G+IDIAVHS+KD+PT L D KT+ LP
Sbjct: 66 EAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGARIG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL K+ + + A AGLK L++ + +T +
Sbjct: 126 TSSLRRQAQLLHRRPDLRIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLSLDDRITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QGA+ I C S+D +M + L ++ E TR AV ER+FL L+G C
Sbjct: 186 FTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGC 241
>gi|254427203|ref|ZP_05040910.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
gi|196193372|gb|EDX88331.1| porphobilinogen deaminase [Alcanivorax sp. DG881]
Length = 310
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G DIAVHSMKDVP L + LP +RE
Sbjct: 67 EEAMMDGRADIAVHSMKDVPMELPEGFALPVICEREDPRDAFVSNTFDSLSSLPHGACVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A AGLK L M + +
Sbjct: 127 TSSLRRQAQVKANRPDLVVKSLRGNVQTRLGKLDAGEFDAIILAAAGLKRLEMHDRIRYE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C D + L L+ +T VV ERA LDG C
Sbjct: 187 MPPEESLPAVGQGAVGIECREADTRTIDLLSPLSDVDTWDRVVAERAMNRRLDGGC 242
>gi|283780135|ref|YP_003370890.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
gi|283438588|gb|ADB17030.1| porphobilinogen deaminase [Pirellula staleyi DSM 6068]
Length = 311
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ L+ G+ID+AVHS+KD+PT +D L +RE
Sbjct: 66 QRRLLAGDIDLAVHSLKDLPTLPIDGLSLAAVPEREDTADILIGPAGTSLATLPSGAKIG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AGLK L + + +T
Sbjct: 126 TGSLRRKAQLLHARADLEILDIRGNVDTRLRKLDEGQYHAIILAAAGLKRLKLDDRMTER 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ML AV QGA+GI S+D K L L+H T QAV+ ER+ L L C
Sbjct: 186 LEAPLMLPAVGQGALGIESRSDDPTTRKLLAPLSHAPTLQAVIAERSLLAALRAGC 241
>gi|374579860|ref|ZP_09652954.1| porphobilinogen deaminase [Desulfosporosinus youngiae DSM 17734]
gi|374415942|gb|EHQ88377.1| porphobilinogen deaminase [Desulfosporosinus youngiae DSM 17734]
Length = 303
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+N E+D+AVHS+KD+PT L I+ +RE
Sbjct: 65 EQGLLNDELDMAVHSLKDMPTLLPPGLIISAFCEREEPRDVFLSKNGVRIEDLPSGAIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q R RKL E + + A AG+K L E +T I
Sbjct: 125 TSSLRRKSQLKHYRPDLSFMDLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEERITQI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D ML AV QG+I + +A+ L LNH T QAV ER + L+G C
Sbjct: 185 LPEDIMLSAVGQGSIAVEIDEKRSDIAELLSRLNHTPTEQAVHAERTLMRKLEGGC 240
>gi|431794235|ref|YP_007221140.1| hydroxymethylbilane synthase [Desulfitobacterium dichloroeliminans
LMG P-21439]
gi|430784461|gb|AGA69744.1| hydroxymethylbilane synthase [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 308
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTI---------------------LPC----- 32
E L++GEID AVHS+KD+PT L LD + LP
Sbjct: 65 EVGLLSGEIDCAVHSLKDLPTILPAGLDIAVFCEREEPRDVFLSREGIQLADLPAGSIIG 124
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q R RKL E + + A AG+K L E +T
Sbjct: 125 TSSLRRKAQLQNYRSDLGFADLRGNLQTRWRKLQESTMAGIVLAAAGVKRLGWEERITEY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + ML AV QGAI + S+ + + + L +LNH ET +AV ERA L L+G C
Sbjct: 185 IPQEIMLSAVGQGAIAVEVVSDREDVRELLSALNHRETERAVRAERALLLRLEGGC 240
>gi|345864134|ref|ZP_08816338.1| porphobilinogen deaminase [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345124665|gb|EGW54541.1| porphobilinogen deaminase [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 293
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++ G DIAVHSMKDVP L + LP +QRE
Sbjct: 51 EQAMLEGRADIAVHSMKDVPAELPEGLHLPVIMQREDPRDAFVSNQYSSFESLPEGARVG 110
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AGLK L + +T
Sbjct: 111 TSSLRRQCQLAEARPDLQIKPLRGNVNTRLRKLDEGEYDAIILASAGLKRLGFEQRITAF 170
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A+ QGAIGI C S+D ++ + L+H +T V ERA L G C
Sbjct: 171 IAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVHAERAMNNRLMGGC 226
>gi|345876405|ref|ZP_08828174.1| porphobilinogen deaminase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226528|gb|EGV52862.1| porphobilinogen deaminase [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 340
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++ G DIAVHSMKDVP L + LP +QRE
Sbjct: 98 EQAMLEGRADIAVHSMKDVPAELPEGLHLPVIMQREDPRDAFVSNQYSSFESLPEGARVG 157
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AGLK L + +T
Sbjct: 158 TSSLRRQCQLAEARPDLQIKPLRGNVNTRLRKLDEGEYDAIILASAGLKRLGFEQRITAF 217
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A+ QGAIGI C S+D ++ + L+H +T V ERA L G C
Sbjct: 218 IAPEQSLPAIGQGAIGIECRSDDAQVNALIAPLHHVDTAACVHAERAMNNRLMGGC 273
>gi|428214858|ref|YP_007088002.1| hydroxymethylbilane synthase [Oscillatoria acuminata PCC 6304]
gi|428003239|gb|AFY84082.1| hydroxymethylbilane synthase [Oscillatoria acuminata PCC 6304]
Length = 322
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ E D+AVHS+KD+PT L + IL C +RE
Sbjct: 73 EVGMLQRETDLAVHSLKDLPTNLPEGLILGCITERENPADALVVHEKHQDKQLETLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+EG A + A AGL L M + +
Sbjct: 133 VIGTSSLRRLAQLRHHYPHLEFKDIRGNLNTRLAKLDEGQYDAIILAFAGLHRLGMADRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C +ND + + + L H+ET Q ERAFL L+G C
Sbjct: 193 HQVIPPEISLHAVGQGALGIECRANDPAILELIKVLEHQETAQRCHAERAFLRRLEGGC 251
>gi|317154529|ref|YP_004122577.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
gi|316944780|gb|ADU63831.1| porphobilinogen deaminase [Desulfovibrio aespoeensis Aspo-2]
Length = 310
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
EEAL++G +AVHSMKDVPT L L+ ++P
Sbjct: 65 EEALLDGRAQLAVHSMKDVPTELPEGLEVGVIPEREASTDSLLSVKYEGLAGLPRGAVVG 124
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ R+RKL G A + A AGL L +T I
Sbjct: 125 TSSLRRQSQLATLRPDLKIESLRGNLDTRVRKLLAGEFDAIVVATAGLNRLELTAPKHEI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AVAQGA+GI S + ++A L LNHE +++ V+ ER FL LDG C
Sbjct: 185 LGPPDFLPAVAQGALGIEYHSANAEVAAMLQFLNHEPSKRQVLAERGFLTGLDGGC 240
>gi|303229236|ref|ZP_07316032.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
gi|302516091|gb|EFL58037.1| hydroxymethylbilane synthase [Veillonella atypica ACS-134-V-Col7a]
Length = 312
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A+ G+IDIAVHS+KD+PT L D KT+ LP
Sbjct: 66 EAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGARIG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL K+ + + A AGLK L + + +T +
Sbjct: 126 TSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QGA+ I C S+D +M + L ++ E TR AV ER+FL L+G C
Sbjct: 186 FTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGC 241
>gi|303230554|ref|ZP_07317308.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
gi|302514795|gb|EFL56783.1| hydroxymethylbilane synthase [Veillonella atypica ACS-049-V-Sch6]
Length = 312
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A+ G+IDIAVHS+KD+PT L D KT+ LP
Sbjct: 66 EAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGARIG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL K+ + + A AGLK L + + +T +
Sbjct: 126 TSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QGA+ I C S+D +M + L ++ E TR AV ER+FL L+G C
Sbjct: 186 FTADEMIPAVGQGALAIECRSDDTEMLEILSKIDDEPTRLAVEGERSFLNQLNGGC 241
>gi|428312984|ref|YP_007123961.1| hydroxymethylbilane synthase [Microcoleus sp. PCC 7113]
gi|428254596|gb|AFZ20555.1| hydroxymethylbilane synthase [Microcoleus sp. PCC 7113]
Length = 322
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN +ID+AVHS+KD+PT L + +L +RE
Sbjct: 73 ELGMINNDIDLAVHSLKDLPTRLPEGLVLGAVTERENPADALVVHSKHQDKQIDTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGLK L+M++ +
Sbjct: 133 VIGTSSLRRLAQLRYHFPHLAFKDIRGNLNTRLAKLDAGEYDALILAAAGLKRLDMSDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP D L AV QGA+GI C +D ++ + L +L H T Q ERAFL L+G C
Sbjct: 193 HQILPSDLSLHAVGQGALGIECREDDAEVLELLKALEHIPTAQRCYAERAFLRELEGGC 251
>gi|392374144|ref|YP_003205977.1| porphobilinogen deaminase [Candidatus Methylomirabilis oxyfera]
gi|258591837|emb|CBE68140.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Candidatus
Methylomirabilis oxyfera]
Length = 315
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL------------------------LDKTILP------ 31
EEAL++G ID+AVHS+KD+P L L T LP
Sbjct: 67 EEALLDGRIDLAVHSLKDLPAELAPGLCEGAVMRREDPLDALVARNGLRFTDLPRGARIG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL KL ++A + A AGL L + + +T
Sbjct: 127 TSSLRRQVQFLHCRPDLQIESLRGNVQTRLNKLETLGLEAVVLAAAGLIRLGLQDRITER 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A+ QGA+ I +D++ A+ + +LNH ETRQA ERAFL L GSC
Sbjct: 187 LQPDLCLPAIGQGALVIEIREDDRQTAERVETLNHRETRQATTAERAFLRRLGGSC 242
>gi|119897284|ref|YP_932497.1| porphobilinogen deaminase [Azoarcus sp. BH72]
gi|119669697|emb|CAL93610.1| hydroxymethylbilane synthase [Azoarcus sp. BH72]
Length = 316
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E AL++G DIAVHSMKDVP + LPC
Sbjct: 76 ETALLDGRADIAVHSMKDVPMEMGKAFALPCISAREVPLDAFVSNRYASLADMPPGTVVG 135
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GN+ RLRKL+EG A + A AGL L + + +
Sbjct: 136 TSSLRRESQLHAQYPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLADRIRAT 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L A QGA+GI C S+ ++A +L LN T V ERA L GSC
Sbjct: 196 LPAEVSLPAAGQGALGIECLSSRPEVAAWLAPLNDPATSACVRAERAVARALAGSC 251
>gi|426401429|ref|YP_007020401.1| porphobilinogen deaminase [Candidatus Endolissoclinum patella L2]
gi|425858097|gb|AFX99133.1| porphobilinogen deaminase [Candidatus Endolissoclinum patella L2]
Length = 312
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 52/181 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E L++ EID AVHS+KD+ T + + T+L L R
Sbjct: 70 ESKLLSREIDAAVHSIKDIETTIAESTVLEAVLPRSDPRDAFISYCVDSFNNLPDGARVG 129
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL EG +AT A+ GL+ L M +T I
Sbjct: 130 TASVRRAALVRSQRPDLQIVLFRGNLDTRLRKLREGQAEATFLAVCGLQRLKMEHTITKI 189
Query: 75 LPIDDMLLAVAQGAIGI-----ACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
+ +++ AV+QGAIG+ + ++D +A++L +L+ +R V+ ER+ L TL GS
Sbjct: 190 MEVNEFPPAVSQGAIGVQRRAGSTATHDANIARWLSALDDWASRSRVIAERSMLATLQGS 249
Query: 130 C 130
C
Sbjct: 250 C 250
>gi|354566731|ref|ZP_08985902.1| Porphobilinogen deaminase [Fischerella sp. JSC-11]
gi|353544390|gb|EHC13844.1| Porphobilinogen deaminase [Fischerella sp. JSC-11]
Length = 323
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + +L +RE
Sbjct: 73 ELGMINQEIDFAVHSLKDLPTRLPEGLVLAAITERENPADALVVHEKHKDKQIDTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ R+ KL+ G A + A+AGL+ L M + +
Sbjct: 133 VIGTSSLRRLAQLRHRYPHFTFKDVRGNLNTRMAKLDAGEYDALILAVAGLQRLGMGDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C + D ++ L ++ H ETR + ERAFL L+G C
Sbjct: 193 HQVLPKEVSLHAVGQGALGIECRAEDTELISLLKAIEHPETRDRCLAERAFLRELEGGC 251
>gi|254292449|ref|YP_003058472.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
gi|254040980|gb|ACT57775.1| porphobilinogen deaminase [Hirschia baltica ATCC 49814]
Length = 323
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 78/174 (44%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
A ++G IDI VHS+KDVPT L D + C L RE
Sbjct: 85 AQLSGRIDIVVHSLKDVPTVLPDGLQMGCYLPREDPRDALFGKVGNIKDLPHGATLGTAS 144
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RLRKL EG ATL A AGL L MT+ +P
Sbjct: 145 LRRSAQALALRPDLKIVMFRGNVQTRLRKLEEGQADATLLAAAGLNRLGMTDKAAGFMPK 204
Query: 78 DDMLLAVAQGAIGIACTSN-DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ML A QG + T+N + + K ++ E+R A + ERAFL LDGSC
Sbjct: 205 EEMLPACGQGIVCTTLTNNAEDWIFKACLQIDVLESRIAAIAERAFLKRLDGSC 258
>gi|407979338|ref|ZP_11160155.1| porphobilinogen deaminase [Bacillus sp. HYC-10]
gi|407414045|gb|EKF35712.1| porphobilinogen deaminase [Bacillus sp. HYC-10]
Length = 311
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N +ID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKGHLRLHELPKGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL A + A AGL + + E V+
Sbjct: 125 TSSLRRSAQLLQERPDLEIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSKEVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C NDK++ + L HE T + V+ ERAFL +DGSC
Sbjct: 185 FLSPDTCLPAVGQGALSIECRGNDKELLQLLAQFTHEYTEKTVLAERAFLKQMDGSC 241
>gi|27364543|ref|NP_760071.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37678265|ref|NP_932874.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
gi|33301181|sp|Q8DD85.1|HEM3_VIBVU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|55976475|sp|Q7MQC7.1|HEM3_VIBVY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27360662|gb|AAO09598.1| porphobilinogen deaminase [Vibrio vulnificus CMCP6]
gi|37197004|dbj|BAC92845.1| porphobilinogen deaminase [Vibrio vulnificus YJ016]
Length = 312
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +ND+++ K L LNH +T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243
>gi|401680657|ref|ZP_10812569.1| hydroxymethylbilane synthase [Veillonella sp. ACP1]
gi|400218322|gb|EJO49205.1| hydroxymethylbilane synthase [Veillonella sp. ACP1]
Length = 312
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A+ G+IDIAVHS+KD+PT L D KT+ LP
Sbjct: 66 EAAMHAGDIDIAVHSLKDMPTELPDGLTLGAISKREVPFDALVSPKYKTLDQLPEGARIG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL K+ + + A AGLK L + + +T +
Sbjct: 126 TSSLRRQAQLLHRRPDLQIEVIRGNVQTRLGKIETEGLDGVVLAQAGLKRLGLDDRITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QGA+ I C S+D +M L ++ E TR AV ER+FL L+G C
Sbjct: 186 FTADEMIPAVGQGALAIECRSDDAEMLDMLSKIDDEPTRLAVEGERSFLNQLNGGC 241
>gi|320154944|ref|YP_004187323.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
gi|319930256|gb|ADV85120.1| porphobilinogen deaminase [Vibrio vulnificus MO6-24/O]
Length = 312
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +ND+++ K L LNH +T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHTDTADRVKCERAMNLTLEGGC 243
>gi|288957245|ref|YP_003447586.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
gi|288909553|dbj|BAI71042.1| hydroxymethylbilane synthase [Azospirillum sp. B510]
Length = 312
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTILP-------------------------- 31
EEAL +G D+AVHSMKDVPT L D T+LP
Sbjct: 71 EEALFDGRADLAVHSMKDVPTQLPDGLEIATLLPREDPRDAFFSRSGGGLADLPAGAVVG 130
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GNVQ RL KL+ G + ATL ALAGL+ L +T ++ +
Sbjct: 131 TAGLRRQAQVLELRPDLRIFPLRGNVQTRLSKLDAGEVDATLLALAGLRRLGLTGRISAV 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + ML AVAQGAIGI S D L LN ET V ERA L LDGSC
Sbjct: 191 LEPETMLPAVAQGAIGIEIRSADDATRALLAPLNCAETMVRVTAERALLAALDGSC 246
>gi|418939516|ref|ZP_13492911.1| Porphobilinogen deaminase [Rhizobium sp. PDO1-076]
gi|375053749|gb|EHS50149.1| Porphobilinogen deaminase [Rhizobium sp. PDO1-076]
Length = 309
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L +GE+D+AVHS KD+PT L + L L RE
Sbjct: 69 EQQLSSGELDLAVHSSKDMPTKLPEGLYLSAFLPREDVRDAVIGRTAPTLQELPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL +G + ATL A AGLK L + T +
Sbjct: 129 SSSLRRQALIRRLRPDVKVITFRGLVETRLRKLADGDVDATLLAFAGLKRLGKQDVSTQL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D + L ++N T AV CERAFLG LDGSC
Sbjct: 189 LDPSEFPPAPAQGAICIESRIGDNGVNALLSAINDRPTFDAVTCERAFLGALDGSC 244
>gi|319763492|ref|YP_004127429.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
gi|317118053|gb|ADV00542.1| porphobilinogen deaminase [Alicycliphilus denitrificans BC]
Length = 309
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G DIAVHS+KDVP L D L C ++RE
Sbjct: 69 EVALEEGRADIAVHSLKDVPMELPDGFALACVMEREDPRDAFVSPHHASLDELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + E + ++
Sbjct: 129 TSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRSV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A QGA+GI S + + L L HE T V ERA + GSC
Sbjct: 189 FEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
>gi|225848376|ref|YP_002728539.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644642|gb|ACN99692.1| porphobilinogen deaminase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 308
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LD-------------------KTI--LPC----- 32
E+A++ GEIDIAVHS+KDVPT L LD K++ LP
Sbjct: 63 EDAMLKGEIDIAVHSLKDVPTQLPEGLDIIAITEREDPRDAFLSTKYKSLKDLPAGAVVG 122
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV R+RKL EG A + A AGLK L + + I
Sbjct: 123 TSSLRRKSQIMKMRDDLIINDLRGNVDTRIRKLEEGQYDAIILAYAGLKRLGLDSKASYI 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+M+ AV QG +GI +D+++ K L +N++E+ ER+FL TL+G C
Sbjct: 183 FSPQEMIPAVCQGFLGIEARVDDERIKKILEPINNQESFIRATAERSFLKTLEGGC 238
>gi|343507060|ref|ZP_08744510.1| porphobilinogen deaminase [Vibrio ichthyoenteri ATCC 700023]
gi|342800694|gb|EGU36207.1| porphobilinogen deaminase [Vibrio ichthyoenteri ATCC 700023]
Length = 312
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQIKERRPDIIIKDLRGNVGTRLGKLDAGEFDAIVLAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 MEAEESLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|384135655|ref|YP_005518369.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289740|gb|AEJ43850.1| porphobilinogen deaminase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 304
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL G+ D+AVHS+KDVP L + + RE
Sbjct: 67 EEALATGQADLAVHSLKDVPFELREGLTIGAVPPREDPRDALISRTGQGLFDLPSGARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLR+L EG A + A +GL L + +T
Sbjct: 127 TSSLRRQAALRRLRPDLCVDTLRGNVDTRLRRLEEGQFDAIVLAASGLHRLGLAGKITEY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D + AV QGA+ + C + D ++ ++L +++ + +AV ER FL L+GSC
Sbjct: 187 LPVDRFVPAVGQGALAVECRTEDDEVMRHLAAISDPDATRAVEAERTFLARLEGSC 242
>gi|260431649|ref|ZP_05785620.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
gi|260415477|gb|EEX08736.1| porphobilinogen deaminase [Silicibacter lacuscaerulensis ITI-1157]
Length = 320
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G IDIAVHS KD+P +L L RE
Sbjct: 79 EEAMLGGYIDIAVHSTKDMPVEQPQGLVLDTFLPREDVRDAFISPRLNSIHDLPEGAVVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV + T A+AGL+ LNM +
Sbjct: 139 TSSLRRRAQLLYRRPDLNVVEFRGNVQTRLKKLADGVAECTFLAMAGLRRLNMQDVPATA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DDML A+AQG IGI ++D + A+ L +++H ET Q + ERA L LDGSC
Sbjct: 199 ISPDDMLPAIAQGTIGIERRADDHRAAEMLEAIHHPETAQRLAAERALLAALDGSC 254
>gi|150398163|ref|YP_001328630.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
gi|150029678|gb|ABR61795.1| porphobilinogen deaminase [Sinorhizobium medicae WSM419]
Length = 330
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+ T L D L L RE
Sbjct: 90 EQQLLSGDLDFAVHSSKDMTTKLPDGLFLSAFLPREDVRDAFVGRSATRLAELPQGATVG 149
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGL+ L M T +
Sbjct: 150 SSSLRRQALIRRLRPDVNVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLGMAHVPTEL 209
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I D ++ L +++ T +AV CER FL TLDGSC
Sbjct: 210 LDPESFPPAPAQGAICIEARLGDDRINALLSAVDDPRTHEAVSCERGFLATLDGSC 265
>gi|218437216|ref|YP_002375545.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
gi|218169944|gb|ACK68677.1| porphobilinogen deaminase [Cyanothece sp. PCC 7424]
Length = 320
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ G+ D+AVHS+KD+PT L D +L C +R
Sbjct: 71 EVSMLEGQTDLAVHSLKDLPTKLPDGLMLGCITERVDPADGLVVNEKHKDKQIETLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL L M++ +
Sbjct: 131 VIGTSSLRRLAQLRYHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLTRLGMSDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C + D ++ + L L H+ TR ER+FL L+G C
Sbjct: 191 HQVIPSDISLHAVGQGALGIECRTEDPEILELLKVLEHQPTRDRCYAERSFLRELEGGC 249
>gi|284929513|ref|YP_003422035.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
gi|284809957|gb|ADB95654.1| hydroxymethylbilane synthase [cyanobacterium UCYN-A]
Length = 318
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ ID AVHS+KD+PT L + +L C +RE
Sbjct: 69 EVAMLQNRIDFAVHSLKDLPTNLPEGLMLGCITERENPADALVVNEKYKNNKLDTLPEGS 128
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A AGLK LNM +
Sbjct: 129 IIGTSSLRRLAQLRHHYPYLIFKDVRGNVNTRLAKLDAGEYDAIILAAAGLKRLNMDNRI 188
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P D L AV QGA+GI C + D ++ + L L H ET + ER+FL L+G C
Sbjct: 189 HQIIPEDISLHAVGQGALGIECRAADSRILELLEVLKHSETHYRCMGERSFLRALEGGC 247
>gi|297583719|ref|YP_003699499.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
gi|297142176|gb|ADH98933.1| porphobilinogen deaminase [Bacillus selenitireducens MLS10]
Length = 312
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 81/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+A+ NGEID+AVHSMKDVP+ + +L +R
Sbjct: 66 EQAMHNGEIDMAVHSMKDVPSTRSEGLVLASVPKRYDPRDALISNSGKTLMELPAGSIVG 125
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RLRK E A + A AGL+ + TE+ VT
Sbjct: 126 TSSLRRGSQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGLERVGWTEDIVTE 185
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C +D ++ + L +NHE+T V ERAFL T++G C
Sbjct: 186 FLDPDLCLPAVGQGALGLECREDDYELRELLAHINHEQTAITVAAERAFLRTVEGGC 242
>gi|330824252|ref|YP_004387555.1| porphobilinogen deaminase [Alicycliphilus denitrificans K601]
gi|329309624|gb|AEB84039.1| Porphobilinogen deaminase [Alicycliphilus denitrificans K601]
Length = 309
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G DIAVHS+KDVP L D L C ++RE
Sbjct: 69 EVALEEGRADIAVHSLKDVPMELPDGFALACIMEREDPRDAFVSPHHASLDELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + E + ++
Sbjct: 129 TSSLRRQVLLQALRPDLKIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRSV 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A QGA+GI S + + L L HE T V ERA + GSC
Sbjct: 189 FEPGQMLPAAGQGALGIEIRSQRQDLRDALAPLAHERTWLTVTAERAVSRAMGGSC 244
>gi|298493147|ref|YP_003723324.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
gi|298235065|gb|ADI66201.1| porphobilinogen deaminase ['Nostoc azollae' 0708]
Length = 322
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 50/176 (28%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
+IN EID AVHS+KD+PT L + L +RE
Sbjct: 75 MINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHKKHKDQQIETLPAGAVIG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+ KL+ G A + A+AGL+ L+M+ + I
Sbjct: 135 TSSLRRLAQLRYKFPHFTFKDVRGNLITRIGKLDAGEYDALILAVAGLERLDMSHRIDQI 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C S+D ++ L ++ H +TR + ER+FL L+G C
Sbjct: 195 LPPDISLHAVGQGALGIECRSDDTEVISLLKAIEHSQTRDRCLAERSFLRVLEGGC 250
>gi|375267022|ref|YP_005024465.1| porphobilinogen deaminase [Vibrio sp. EJY3]
gi|369842342|gb|AEX23486.1| porphobilinogen deaminase [Vibrio sp. EJY3]
Length = 312
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSVDELPQGAIVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLIIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHKDTEDRVLCERAMNLTLEGGC 243
>gi|148978777|ref|ZP_01815157.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
gi|145962198|gb|EDK27482.1| porphobilinogen deaminase [Vibrionales bacterium SWAT-3]
Length = 326
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 82 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 141
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + E + +
Sbjct: 142 TCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSF 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 202 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 257
>gi|162219161|ref|YP_747258.2| porphobilinogen deaminase [Nitrosomonas eutropha C91]
Length = 308
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G DIAVHSMKDVP + L +RE
Sbjct: 68 ELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEELPTGSVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + ++ +
Sbjct: 128 TSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISML 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ND M +++ L+H T V ERA L GSC
Sbjct: 188 IPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLGGSC 243
>gi|383783926|ref|YP_005468494.1| porphobilinogen deaminase [Leptospirillum ferrooxidans C2-3]
gi|383082837|dbj|BAM06364.1| putative porphobilinogen deaminase [Leptospirillum ferrooxidans
C2-3]
Length = 309
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ ++D+AVHSMKDVP + + IL ++RE
Sbjct: 65 EEALLSRQVDLAVHSMKDVPAEMPEGLILGVTMEREDPRDVFVSIHYPSLRKLPTGAKLG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL EG + A L A AG+K L + +T
Sbjct: 125 TSSLRRVSQVRRIRPDLVIVPVRGNVGTRLRKLEEGQVDALLLAGAGMKRLGLEHKITEW 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + D+L A+ QGA+G+ +D + L H +T AV ER L +L G C
Sbjct: 185 LLVSDLLPAIGQGALGLEYRESDTITSSIASRLFHSDTHIAVSAERGVLKSLAGGC 240
>gi|357622830|gb|EHJ74208.1| putative porphobilinogen deaminase [Danaus plexippus]
Length = 404
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL N +D VHS+KD+PT L + + +RE
Sbjct: 70 EEALRNNTVDFVVHSLKDLPTTLPEGLAIGAVFEREDPRDALVLREDIKEATLSALPAGS 129
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL+KL+ G A L A AGL+ + + +
Sbjct: 130 IIGTSSLRRTAQLRGSYPELSVQDVRGNLNTRLKKLDSGAYSALLLATAGLERMGWEKRI 189
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
T ILP +M+ AV QGA+ + C S++ ++ L NH ET V+ ER+FL TL G C
Sbjct: 190 TKILPCSEMMYAVGQGALAVECRSDNAEILTLLSPFNHVETYCRVLAERSFLKTLGGGC 248
>gi|30248604|ref|NP_840674.1| porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
gi|39931498|sp|Q82WS2.1|HEM3_NITEU RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|30180199|emb|CAD84501.1| Porphobilinogen deaminase [Nitrosomonas europaea ATCC 19718]
Length = 308
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G DIAVHSMKDVP + L +RE
Sbjct: 68 ELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEELPAGSVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + ++ +
Sbjct: 128 TSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISML 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ND M +++ L+H T V ERA L GSC
Sbjct: 188 LPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLGGSC 243
>gi|148262442|ref|YP_001229148.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
gi|189028092|sp|A5GCW2.1|HEM3_GEOUR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146395942|gb|ABQ24575.1| porphobilinogen deaminase [Geobacter uraniireducens Rf4]
Length = 318
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 77/175 (44%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G+IDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIKFADLPKGAKIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+ KL + A + A AGLK L T+ V L
Sbjct: 127 SALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLGFTDKVAEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D + A+ QGA+GI C +++++ + NH T AV ERA L +G C
Sbjct: 187 PTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRCEGGC 241
>gi|404329329|ref|ZP_10969777.1| porphobilinogen deaminase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 305
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
E AL+ GEID AVHSMKD+P L L+ +P
Sbjct: 65 ERALLGGEIDFAVHSMKDMPAELPEGLEIASIPEREDPHDVLLSAKNRRLEELKPGAVIG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV R+ +L G A + A AG+K L + EN
Sbjct: 125 TSSLRRAAQILSVRPDLTIRPLRGNVTTRISRLKSGDFDAIVLAAAGMKRLGIEEN-GEA 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D +L AV QGA+ I C S+D + L +NHE+T V ERAFL L+GSC
Sbjct: 184 LPYDFLLPAVGQGALAIECRSSDIGLKALLDRINHEQTAVTVRAERAFLKRLNGSC 239
>gi|114308050|gb|ABI59293.1| hydroxymethylbilane synthase [Nitrosomonas eutropha C91]
Length = 334
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G DIAVHSMKDVP + L +RE
Sbjct: 94 ELALEDGRADIAVHSMKDVPMIVPSGFRLAAITEREDPRDAFVSNDFTSLEELPTGSVVG 153
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + ++ +
Sbjct: 154 TSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISML 213
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ND M +++ L+H T V ERA L GSC
Sbjct: 214 IPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHATTAYCVEAERAMSRVLGGSC 269
>gi|197116806|ref|YP_002137233.1| porphobilinogen deaminase [Geobacter bemidjiensis Bem]
gi|226706286|sp|B5EBG8.1|HEM3_GEOBB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|197086166|gb|ACH37437.1| hydroxymethylbilane synthase [Geobacter bemidjiensis Bem]
Length = 318
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 77/175 (44%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNGVKFADLPQGARIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNVQ R+ KL + A + A AGL L + +T +L
Sbjct: 127 SALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLGFADQITEML 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D L A+ QGA+GI C +++ + + N +T +AV ERA L +G C
Sbjct: 187 PTDLSLPAIGQGALGIECNLSNQDVKDAISFFNSPDTSRAVRAERALLWRCEGGC 241
>gi|402571753|ref|YP_006621096.1| hydroxymethylbilane synthase [Desulfosporosinus meridiei DSM 13257]
gi|402252950|gb|AFQ43225.1| hydroxymethylbilane synthase [Desulfosporosinus meridiei DSM 13257]
Length = 303
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+N E+D+AVHS+KD+PT L I+ +RE
Sbjct: 65 EHGLLNDELDMAVHSLKDMPTQLPPGLIISAFCEREEPRDVFLSKNGVKLEELPPGALIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q R RKL E + + A AG+K L +T I
Sbjct: 125 TSSLRRKSQLKHYRPDLNFTDLRGNLQTRWRKLQESDMVGIVLAAAGVKRLGWAHRITQI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D ML AV QG+I I +A+ L LNH ET +AV ER + L+G C
Sbjct: 185 LPEDIMLSAVGQGSIAIEIDEKRSDVAELLARLNHPETERAVRAERTLMRKLEGGC 240
>gi|254781037|ref|YP_003065450.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040714|gb|ACT57510.1| porphobilinogen deaminase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 307
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI+GEID AVHS KD+PT LL + L RE
Sbjct: 69 EKKLISGEIDCAVHSAKDMPTKLLKGLQISAYLPREDIRDVFISHTAQSLKDLALHSVIG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G ++ RL KLN A L A AG+K L + + I
Sbjct: 129 TSSLRRKALLLRWRSDISVIDFRGKIETRLNKLNNNKAHAILLAYAGIKRLKKEKVIKEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L I+D + QGAI I N+ K + + +NHE+T +V CERAFL LDGSC
Sbjct: 189 LNIEDFPPSPGQGAICIETHVNNPKAQELVKVINHEDTWDSVNCERAFLAELDGSC 244
>gi|428297444|ref|YP_007135750.1| hydroxymethylbilane synthase [Calothrix sp. PCC 6303]
gi|428233988|gb|AFY99777.1| hydroxymethylbilane synthase [Calothrix sp. PCC 6303]
Length = 323
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + +L +RE
Sbjct: 73 ELGMINQEIDFAVHSLKDLPTNLPEGLVLAAITERENPADALVVNEKFKDRQIDTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L M + V
Sbjct: 133 VVGTSSLRRLAQLRHHYPHLAFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C +D ++ K L ++ H TR + ERAFL L+G C
Sbjct: 193 HQVLPKEVSLHAVGQGALGIECRGDDAEVQKLLKAIEHPATRDRCLAERAFLRDLEGGC 251
>gi|428768700|ref|YP_007160490.1| hydroxymethylbilane synthase [Cyanobacterium aponinum PCC 10605]
gi|428682979|gb|AFZ52446.1| hydroxymethylbilane synthase [Cyanobacterium aponinum PCC 10605]
Length = 320
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E ++NG++D AVHS+KD+PT L + +L C QR
Sbjct: 72 EVGMLNGDVDFAVHSLKDLPTNLPEGLMLGCVTQRVNPADALVVHEKHKDKQLETLPEGS 131
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L M + +
Sbjct: 132 VIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGMGDRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C + D+K+ + + S+ TR + ER+FL L+G C
Sbjct: 192 HQVIPAEISLHAVGQGALGIECRTGDEKVLQIIKSIEDPNTRDCTLAERSFLRVLEGGC 250
>gi|323495298|ref|ZP_08100379.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
gi|323310475|gb|EGA63658.1| porphobilinogen deaminase [Vibrio brasiliensis LMG 20546]
Length = 312
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNSIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQIKEARPDLIIKELRGNVGTRLGKLDAGDYDAIILAAAGLKRLELEERIKSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D ++ K L LNH+ET V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDDRLIKLLEPLNHKETADRVLCERAMNLTLEGGC 243
>gi|288818572|ref|YP_003432920.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|384129326|ref|YP_005511939.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|288787972|dbj|BAI69719.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
gi|308752163|gb|ADO45646.1| porphobilinogen deaminase [Hydrogenobacter thermophilus TK-6]
Length = 304
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 49/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTILP----------- 31
EEAL+ EID+AVHS+KDVP L+ K LP
Sbjct: 62 EEALMKKEIDLAVHSLKDVPMNLPEGLKIGAVTERENPFDVLISKDHLPLEELPSNAKVG 121
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV R+RKL+EG+ A + A AG+K + + + +T +
Sbjct: 122 TSSLRRQVQIKRRRGDLRVEMLRGNVDTRIRKLDEGLYHAVILAYAGVKRMGLEDRITQV 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D + AV QG++ I +D + + + +H E+R CERAFL L G C
Sbjct: 182 L--EDFIPAVGQGSLAIEIRQDDSAVEEIVSCFDHYESRLRAECERAFLRELQGGC 235
>gi|350427600|ref|XP_003494816.1| PREDICTED: porphobilinogen deaminase-like [Bombus impatiens]
Length = 309
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LPCN---- 33
E AL+N + DIAVHSMKD+P TI LP N
Sbjct: 66 EHALLNDQADIAVHSMKDIPVEFPKGLALTTICCREDPRDAFVSNNYQSLAQLPANAIVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GNV RL+KL+ G A + A AGL L +T +T
Sbjct: 126 TSSLRRQSQLRATYPHLTIRDLRGNVGTRLQKLDNGEYDAIILAAAGLTRLGLTARITQA 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L I DML AV QGAIGI ND ++ L L+ TR +V ERAF TL G C
Sbjct: 186 LEITDMLPAVGQGAIGIESRLNDSAISTLLAPLDDPSTRFCIVAERAFNETLQGGC 241
>gi|86148167|ref|ZP_01066465.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218710949|ref|YP_002418570.1| porphobilinogen deaminase [Vibrio splendidus LGP32]
gi|254800262|sp|B7VMD9.1|HEM3_VIBSL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|85834014|gb|EAQ52174.1| porphobilinogen deaminase [Vibrio sp. MED222]
gi|218323968|emb|CAV20330.1| Porphobilinogen deaminase [Vibrio splendidus LGP32]
Length = 312
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|407071408|ref|ZP_11102246.1| porphobilinogen deaminase [Vibrio cyclitrophicus ZF14]
Length = 312
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|357386248|ref|YP_004900972.1| porphobilinogen deaminase [Pelagibacterium halotolerans B2]
gi|351594885|gb|AEQ53222.1| Porphobilinogen deaminase [Pelagibacterium halotolerans B2]
Length = 315
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EIDIAVHS KDV T + LP L RE
Sbjct: 70 EKALAESEIDIAVHSAKDVATEIDPLFALPAFLPREDVRDAFLSLIAKSPDHLPEGAVIG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV ATL A+AGL L VT+
Sbjct: 130 SSSLRRRAQMKRFRPDFRTVEFRGNVQTRLKKLADGVADATLLAMAGLNRLGEAHRVTHT 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAI I ++D + + L+ +TR+ V ERAFL LDGSC
Sbjct: 190 LDVAHFPPAPAQGAIVIETRADDGAANRLVEVLDDPDTRKRVEAERAFLKVLDGSC 245
>gi|154245106|ref|YP_001416064.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
gi|154159191|gb|ABS66407.1| porphobilinogen deaminase [Xanthobacter autotrophicus Py2]
Length = 317
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTILP-------------------------- 31
EEAL++G +D+AVHS KDV T L D LP
Sbjct: 79 EEALLDGRVDLAVHSAKDVATVLPDGLHLAGYLPRADVRDALILKSGAALADLPAGAKVG 138
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RL K+ +G ATL ALAGL L M + + +
Sbjct: 139 TASLRREAQLRRIRPDLKVELLRGNVHTRLAKVKDGDFDATLLALAGLTRLGMAQAASCV 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DD L AV QGA+ I C D + ++ +T A+ ERAFL LDGSC
Sbjct: 199 LATDDFLPAVGQGAVAIECRIADPDTNAAIAAIACRDTGIALEAERAFLAALDGSC 254
>gi|335041128|ref|ZP_08534244.1| Porphobilinogen deaminase [Caldalkalibacillus thermarum TA2.A1]
gi|334178926|gb|EGL81575.1| Porphobilinogen deaminase [Caldalkalibacillus thermarum TA2.A1]
Length = 310
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 82/177 (46%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ GEID AVHS+KD+P L L C +RE
Sbjct: 66 EQALLEGEIDFAVHSVKDMPAELPPGLELACVPKREDPRDCLISKRNQTLDSLPDGAVIG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RLRKL E A + A +GLK + +++ V T
Sbjct: 126 TSSLRRAAQILHARPDVKIKWIRGNVDTRLRKLREEDYDAIILAASGLKRIGLSDEVITQ 185
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+GI C ++D+++ L ++HE + AV+ ERAFL + GSC
Sbjct: 186 YLEPDICLPAVGQGALGIECRASDQELKGLLTYIHHEPSGLAVMAERAFLAEMGGSC 242
>gi|254440462|ref|ZP_05053956.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
gi|198255908|gb|EDY80222.1| porphobilinogen deaminase [Octadecabacter antarcticus 307]
Length = 321
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G+IDIAVHS KD+P D +L L RE
Sbjct: 79 EEAMLAGQIDIAVHSTKDMPVAQPDGLVLDVFLPREDARDAFVSVKYSGIPDLPEGAIVG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +G+ AT A+AGL + M +
Sbjct: 139 TSSLRRRAQLLAKRPDLTVVEFRGNVQTRLKKLADGLADATFLAMAGLNRMGMDDAAMGA 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + DML A+AQG I I +D + L +++ + Q + ER+FL LDGSC
Sbjct: 199 IDLADMLPAIAQGTISIERRIDDLRARDMLAAIHDVQAGQQMAAERSFLAALDGSC 254
>gi|94264595|ref|ZP_01288379.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
gi|93454949|gb|EAT05186.1| Porphobilinogen deaminase [delta proteobacterium MLMS-1]
Length = 311
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GE+DIAVHSMKDVP L + QRE
Sbjct: 66 EEAMLRGEVDIAVHSMKDVPAELPQGLHIGIITQRENPFDAFVSNLYQNIEALPTGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG + A AGL L++ T
Sbjct: 126 TSSLRRKSQLAALRPDLTIEDLRGNLDTRLRKLDEGQYDGIILAAAGLNRLDLAHRATFY 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ML AVAQGA+GI D + + L ++H T AV ERA+L L+G C
Sbjct: 186 FQAEQMLPAVAQGAVGIELRRADADLLEMLSFMDHRATTLAVKAERAYLKRLEGGC 241
>gi|365158042|ref|ZP_09354285.1| porphobilinogen deaminase [Bacillus smithii 7_3_47FAA]
gi|363622221|gb|EHL73392.1| porphobilinogen deaminase [Bacillus smithii 7_3_47FAA]
Length = 306
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N EID+AVHSMKD+P YL + + C +RE
Sbjct: 65 EQAMLNKEIDMAVHSMKDMPAYLPEGLTIGCIPEREDHRDVLISKDGLTLDQLPAGAKIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + T++V T
Sbjct: 125 TSSLRRGAQILAHRPDVKIQWIRGNIDTRLKKLETDDYDAIVLAAAGLSRMGWTKDVVTQ 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ + C +D+++ L LN +T Q+V ERAFL +DG C
Sbjct: 185 FLDPDICLPAVGQGALAVECRKDDEELLSLLQGLNSTDTAQSVAAERAFLQKMDGGC 241
>gi|193215989|ref|YP_001997188.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
gi|238058923|sp|B3QWI1.1|HEM3_CHLT3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193089466|gb|ACF14741.1| porphobilinogen deaminase [Chloroherpeton thalassium ATCC 35110]
Length = 314
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ EID+AVHS+KD+PT + ++ +RE
Sbjct: 66 EHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTLPQGAIVA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R ++ EG +A L A AG+ L +E++ I
Sbjct: 126 TSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEFSEHIAEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DD+L AV QGA+GI +D++ + L LNH ET CER+ L TL+G C
Sbjct: 186 ISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLEGGC 241
>gi|206889552|ref|YP_002248559.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741490|gb|ACI20547.1| porphobilinogen deaminase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 311
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ +D+AVHSMKDVPT + + + +RE
Sbjct: 69 EEALLSKRVDLAVHSMKDVPTEIPEGLQISAICEREDPRDAFISKDGVLLNELPQEAVLG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL +G QA + A+AG+K + + VT
Sbjct: 129 TSSLRRTVQLKALRNDLVIKPLRGNVDTRIRKLKDGEFQAIVLAMAGVKRMGVENLVTQA 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D M+ A+ QGAIGI +D + + + LNHEET ++ ERAFL + G C
Sbjct: 189 FSEDLMIPAIGQGAIGIETRVDDDFVNELIKPLNHEETAICILAERAFLSVMGGGC 244
>gi|323500165|ref|ZP_08105110.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
gi|323314794|gb|EGA67860.1| porphobilinogen deaminase [Vibrio sinaloensis DSM 21326]
Length = 312
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TY-LLDKTILP---- 31
E A++ G D+AVHSMKDVP TY +D+ LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPSGLGLVTICEREDPRDAFVSNTYNSIDE--LPQGAV 125
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
C+L+R+ GNV RL KL+ G A + A AGLK L + E +
Sbjct: 126 VGTCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIR 185
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 186 SFIEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 243
>gi|163803631|ref|ZP_02197496.1| porphobilinogen deaminase [Vibrio sp. AND4]
gi|159172579|gb|EDP57439.1| porphobilinogen deaminase [Vibrio sp. AND4]
Length = 312
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPIDFPDGLGLVTICEREDPRDAFVSNTYNNIDDLPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH +T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRIDDERLRKLLEPLNHRDTADRVRCERAMNLTLEGGC 243
>gi|197121772|ref|YP_002133723.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|220916566|ref|YP_002491870.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196171621|gb|ACG72594.1| porphobilinogen deaminase [Anaeromyxobacter sp. K]
gi|219954420|gb|ACL64804.1| porphobilinogen deaminase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 314
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+N + ++AVHSMKD+P L +L QRE
Sbjct: 63 EDALLNRDAEVAVHSMKDLPAVLAPGLVLAAVPQREDPRDALCSPRWKTLAALPKGARVG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK +EG + A + A AGL+ L + E+ T +
Sbjct: 123 TSSLRRSAQLKALRPDLQMEMVRGNVETRLRKASEG-LDAVVLAYAGLRRLGLAEHATYV 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P ++ML AVAQGA+ + ++D L +L +TR + ER FL ++G C
Sbjct: 182 FPPEEMLPAVAQGALALEARADDAPTLARLAALEDPDTRVRIEAERGFLARIEGGC 237
>gi|84393564|ref|ZP_00992318.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
gi|84375843|gb|EAP92736.1| porphobilinogen deaminase [Vibrio splendidus 12B01]
Length = 312
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTI-----LP------ 31
E A++ G D+AVHSMKDVP + T LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYNNIDELPQGAAVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|319779685|ref|YP_004130598.1| porphobilinogen deaminase [Taylorella equigenitalis MCE9]
gi|397661912|ref|YP_006502612.1| porphobilinogen deaminase [Taylorella equigenitalis ATCC 35865]
gi|317109709|gb|ADU92455.1| Porphobilinogen deaminase [Taylorella equigenitalis MCE9]
gi|394350091|gb|AFN36005.1| porphobilinogen deaminase [Taylorella equigenitalis ATCC 35865]
Length = 313
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +L++G D+AVHS+KDVP L D+ + C L+RE
Sbjct: 69 ESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDLPEGAIVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL+KL++G A + A AGLK LNM + + +
Sbjct: 129 TSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNMMDRIKSF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ IDD L AV QGA+ I + + + L L+HEET + V ER L GSC
Sbjct: 189 VSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCVSAERIVSQYLGGSC 244
>gi|343500729|ref|ZP_08738618.1| porphobilinogen deaminase [Vibrio tubiashii ATCC 19109]
gi|418478539|ref|ZP_13047642.1| porphobilinogen deaminase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342819838|gb|EGU54672.1| porphobilinogen deaminase [Vibrio tubiashii ATCC 19109]
gi|384573891|gb|EIF04375.1| porphobilinogen deaminase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 312
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GN+ RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQIKESRPDLVIKELRGNLGTRLGKLDAGEYDAIILAAAGLKRLELEERIKSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH+ET V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKETADRVLCERAMNLTLEGGC 243
>gi|428226992|ref|YP_007111089.1| hydroxymethylbilane synthase [Geitlerinema sp. PCC 7407]
gi|427986893|gb|AFY68037.1| hydroxymethylbilane synthase [Geitlerinema sp. PCC 7407]
Length = 322
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ GE D AVHS+KD+PT L + +L C +RE
Sbjct: 73 EVGMLKGESDFAVHSLKDLPTRLPEGLMLGCVTERENPADALVLHEKHRDKQLATLPEGS 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL G A + A+AGL+ L M + V
Sbjct: 133 VIGTSSLRRLAQLRHHFPHLQFKDVRGNLNTRLAKLEAGEYDALILAVAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C + D ++ L L H ET Q ERAFL L+G C
Sbjct: 193 HQVIPAEISLHAVGQGALGIECRTEDPEILSLLKVLEHTETAQRCYAERAFLRELEGGC 251
>gi|328952141|ref|YP_004369475.1| porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
gi|328452465|gb|AEB08294.1| Porphobilinogen deaminase [Desulfobacca acetoxidans DSM 11109]
Length = 311
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------------LDKTIL 30
E A+++GE+D+ VHSMKDVPT + L I
Sbjct: 66 EMAILSGEVDLGVHSMKDVPTEIPLGLVIGITTVREDPRDAFISRKYRSLAEIPLGGRIG 125
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLRKL E + A + A AGL L +T I
Sbjct: 126 TGSLRRRAQLLHLRPDLEIVPLRGNVDTRLRKLTEADLDAIILAAAGLHRLGRAAEITAI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP ML A+ QGA+G+ +D + L L+ ETR AV ERAFL L+G C
Sbjct: 186 LPETQMLPAIGQGALGLEYRQDDAVTMELLEFLDDPETRVAVAAERAFLARLEGGC 241
>gi|407697824|ref|YP_006822612.1| porphobilinogen deaminase [Alcanivorax dieselolei B5]
gi|407255162|gb|AFT72269.1| Porphobilinogen deaminase [Alcanivorax dieselolei B5]
Length = 309
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++G DIAVHSMKDVP L + LP +RE
Sbjct: 66 EQAMMDGRADIAVHSMKDVPMELPEGMALPVICEREDPRDAFVSNHHDALSALPEGACVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A AGLK L M + +
Sbjct: 126 TSSLRRQAQVLANRPDLKVSSLRGNVQTRLGKLDSGDFDAIILAAAGLKRLEMHDRIRYE 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C + D+ + L LN T V ERA L+G C
Sbjct: 186 MPPEESLPAVGQGAVGIECRAGDEPVQALLAPLNDPLTWDRVSAERAMNRRLEGGC 241
>gi|260774857|ref|ZP_05883759.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609282|gb|EEX35437.1| porphobilinogen deaminase [Vibrio coralliilyticus ATCC BAA-450]
Length = 312
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|110835183|ref|YP_694042.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
gi|123345297|sp|Q0VM28.1|HEM3_ALCBS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|110648294|emb|CAL17770.1| porphobilinogen deaminase [Alcanivorax borkumensis SK2]
Length = 310
Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G DIAVHSMKDVP L LP +RE
Sbjct: 67 EEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSSLPHGACVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A AGLK L M + +
Sbjct: 127 TSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLEMHDRIRYE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C D+ + L L+ +T VV ERA L+G C
Sbjct: 187 MPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRLEGGC 242
>gi|254508818|ref|ZP_05120929.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
gi|219548275|gb|EED25289.1| porphobilinogen deaminase [Vibrio parahaemolyticus 16]
Length = 271
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 27 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPHGAVVG 86
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 87 TCSLRRQCQIKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 146
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 147 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHQDTADRVLCERAMNLTLEGGC 202
>gi|409989715|ref|ZP_11273227.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca]
gi|409939424|gb|EKN80576.1| porphobilinogen deaminase [Arthrospira platensis str. Paraca]
Length = 322
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N + D+AVHS+KD+PT L + +L C +RE
Sbjct: 73 EVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQLDTLPPGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL+KL+EG A + A+AGLK L M + +
Sbjct: 133 VVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKRLGMADRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + + +L H T Q ERAFL L+G C
Sbjct: 193 HQVIPAEISLHAVGQGALGIECREGDTEILEVVKALEHTATAQRCHSERAFLRELEGGC 251
>gi|254230107|ref|ZP_04923503.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262392880|ref|YP_003284734.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|151937352|gb|EDN56214.1| porphobilinogen deaminase [Vibrio sp. Ex25]
gi|262336474|gb|ACY50269.1| porphobilinogen deaminase [Vibrio sp. Ex25]
Length = 312
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLEGGC 243
>gi|451972066|ref|ZP_21925279.1| porphobilinogen deaminase [Vibrio alginolyticus E0666]
gi|451932080|gb|EMD79761.1| porphobilinogen deaminase [Vibrio alginolyticus E0666]
Length = 312
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLEGGC 243
>gi|406039982|ref|ZP_11047337.1| porphobilinogen deaminase [Acinetobacter ursingii DSM 16037 = CIP
107286]
Length = 305
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + LP +RE
Sbjct: 65 EAALLDGRADLAVHSMKDVPMHLPEGLCLPVICEREDPFDAFVSNHFVHFEDLPQGARVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGLK L + + +
Sbjct: 125 TSSLRRKCQILKQRPDLTIIDLRGNVGTRLSKLDEGQYDAIILASAGLKRLGLESRIRHA 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+G+ C +ND+ + + L HE+T V ERAF L+G C
Sbjct: 185 LAPEISLPAVGQGALGLECRTNDQTVLDLIQPLLHEQTWHCVRAERAFNAYLEGGC 240
>gi|126653692|ref|ZP_01725611.1| porphobilinogen deaminase [Bacillus sp. B14905]
gi|126589729|gb|EAZ83864.1| porphobilinogen deaminase [Bacillus sp. B14905]
Length = 310
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P L + ++ C RE
Sbjct: 65 EQALYDKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFADLPAGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RL KL A + A AGLK L +E+V T
Sbjct: 125 TSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++D L AVAQG++GI C +D ++ L L + T Q ERAFL +DG C
Sbjct: 185 FLSVEDCLPAVAQGSLGIECRGDDTELLAELAKLTDQLTWQEAHAERAFLAAMDGGC 241
>gi|394990325|ref|ZP_10383157.1| hypothetical protein SCD_02751 [Sulfuricella denitrificans skB26]
gi|393790590|dbj|GAB72796.1| hypothetical protein SCD_02751 [Sulfuricella denitrificans skB26]
Length = 317
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+ G DIAVHS+KDVP + + +L +RE
Sbjct: 76 EQAMQEGRADIAVHSLKDVPMVMPEGFVLAAIGEREDPRDAFVSNQFKNLEELPPGSVVG 135
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + + +T++
Sbjct: 136 TSSLRRQCQIQARFPALKIESLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGDRITSL 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGAIGI C + D + L SLNH +T V ERA L GSC
Sbjct: 196 LPPEQSLPAVGQGAIGIECRAGDDDLIALLASLNHTDTAACVTAERAMSRALAGSC 251
>gi|345860142|ref|ZP_08812468.1| porphobilinogen deaminase [Desulfosporosinus sp. OT]
gi|344326783|gb|EGW38235.1| porphobilinogen deaminase [Desulfosporosinus sp. OT]
Length = 304
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E LIN E+D+AVHS+KD+PT L ++ +RE
Sbjct: 66 EHGLINNELDMAVHSLKDMPTLLPTGLMISAYCEREEPRDVYLSKSGIRLEELPSGSIIG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+Q R +KL E ++ + A AG+K L E +T I
Sbjct: 126 TSSLRRKSQLKHYRPDLNFMDLRGNLQTRWKKLLESDMEGIVLAAAGVKRLGWEERITQI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV QG+I I N + + L LNH +T QAV ERA + L+G C
Sbjct: 186 LSEDMMLSAVGQGSIAIEIGENRSDIHELLSHLNHSDTEQAVCAERALMRKLEGGC 241
>gi|420206022|ref|ZP_14711533.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM008]
gi|394278695|gb|EJE23009.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM008]
Length = 308
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 79/174 (45%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT+ L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTSYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|269964925|ref|ZP_06179095.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
gi|269830401|gb|EEZ84625.1| porphobilinogen deaminase [Vibrio alginolyticus 40B]
Length = 312
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLEGGC 243
>gi|91227534|ref|ZP_01261871.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
gi|91188558|gb|EAS74850.1| porphobilinogen deaminase [Vibrio alginolyticus 12G01]
Length = 312
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EIAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSHIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLLKLLEPLNHQDTVDRVLCERAMNLTLEGGC 243
>gi|427707334|ref|YP_007049711.1| hydroxymethylbilane synthase [Nostoc sp. PCC 7107]
gi|427359839|gb|AFY42561.1| hydroxymethylbilane synthase [Nostoc sp. PCC 7107]
Length = 323
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 73 ELGMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKYKDKQIETLPAGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L M + V
Sbjct: 133 VIGTSSLRRLAQLRHQFPHFTFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C ++D + L ++ H ETR + ER+FL L+G C
Sbjct: 193 HQILPKEISLHAVGQGALGIECRTDDADLISLLKAIEHPETRDRCLAERSFLRILEGGC 251
>gi|298527685|ref|ZP_07015089.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511337|gb|EFI35239.1| porphobilinogen deaminase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 313
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP------------------------TYLLDKTILP------ 31
EEAL++G DIAVHSMKD+P T D + LP
Sbjct: 65 EEALMDGRADIAVHSMKDMPAELPRGLKLGIIPERESRFDVLLSTSYPDISSLPTGATVG 124
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RLRKL EG+ A + A AG+ LNM +
Sbjct: 125 TSSLRRQAQILHMRPDLEIQMLRGNLDTRLRKLKEGIYDAIIVAAAGMSRLNMHADYVTE 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI + +++ + LG ++ TR + CERAFL L+G C
Sbjct: 185 LSPPYFLPAVGQGALGIEYLQDRQELDELLGFMDDFSTRYCIECERAFLAELEGGC 240
>gi|399115754|emb|CCG18557.1| porphobilinogen deaminase [Taylorella equigenitalis 14/56]
Length = 313
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +L++G D+AVHS+KDVP L D+ + C L+RE
Sbjct: 69 ESSLLSGVTDLAVHSLKDVPVELNDEFEIACILERENPMDAFVSNEYKTFKDLPEGAIVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL+KL++G A + A AGLK LNM + + +
Sbjct: 129 TSSLRRESQIRAKFPHLVVKPLRGNLDTRLKKLDDGQYSAIILAAAGLKRLNMMDRIKSF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ IDD L AV QGA+ I + + + L L+HEET + + ER L GSC
Sbjct: 189 VSIDDSLPAVGQGALAIEILKDKFALKEMLSYLHHEETFKCISAERIVSQYLGGSC 244
>gi|406990347|gb|EKE10015.1| hypothetical protein ACD_16C00089G0010 [uncultured bacterium]
Length = 148
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 55/88 (62%)
Query: 43 RLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAK 102
R+ K+ G I A L A+AGLK + E +T ILP+ + L AVAQGA+G+ C D + +
Sbjct: 4 RIAKIEAGKIDAALFAVAGLKRQGLLEKITQILPLKECLPAVAQGALGVQCRKEDHDLLE 63
Query: 103 YLGSLNHEETRQAVVCERAFLGTLDGSC 130
L LNH + QA+ CERAF+ L GSC
Sbjct: 64 ILHPLNHPPSFQAISCERAFMKALHGSC 91
>gi|388602872|ref|ZP_10161268.1| porphobilinogen deaminase [Vibrio campbellii DS40M4]
gi|444427391|ref|ZP_21222774.1| porphobilinogen deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239337|gb|ELU50906.1| porphobilinogen deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 312
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGC 243
>gi|153004241|ref|YP_001378566.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
gi|152027814|gb|ABS25582.1| porphobilinogen deaminase [Anaeromyxobacter sp. Fw109-5]
Length = 313
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E+AL+ + +IAVHSMKD+P L KT+ LP
Sbjct: 63 EDALLASDAEIAVHSMKDLPAELAPGLAIGAVPEREDPRDALCSPRYKTLAGLPRGAKVG 122
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV+ RLRK +E + A + A AGL+ L + E+ T +
Sbjct: 123 TSSLRRGAQLKALRPDLQLEMVRGNVETRLRKASE-ALDAVVLAYAGLRRLGLAEHATYV 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P ++ML AVAQGA+ + + D L +L H ETR + ER FLG ++G C
Sbjct: 182 FPAEEMLPAVAQGALALEARAADAPTMARLAALEHPETRVRIEAERGFLGRIEGGC 237
>gi|67924108|ref|ZP_00517554.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
gi|416393936|ref|ZP_11686050.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 0003]
gi|67854033|gb|EAM49346.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 8501]
gi|357263418|gb|EHJ12433.1| Porphobilinogen deaminase [Crocosphaera watsonii WH 0003]
Length = 318
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E A++ ++D AVHS+KD+PT L + +L C +R
Sbjct: 69 ETAMLQNQVDFAVHSLKDLPTNLPEGLMLGCVTERVNPADALVVHEKHRDKQLDTLPEGS 128
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L+M++ +
Sbjct: 129 VIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLGKLDSGEYDAIILAVAGLQRLDMSDRI 188
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C + D ++ + L L ETR ERAFL L+G C
Sbjct: 189 HQVIPDDISLHAVGQGALGIECRTGDPEILELLKVLEDTETRDRCYAERAFLRQLEGGC 247
>gi|424044460|ref|ZP_17782083.1| porphobilinogen deaminase [Vibrio cholerae HENC-03]
gi|408888041|gb|EKM26505.1| porphobilinogen deaminase [Vibrio cholerae HENC-03]
Length = 312
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGC 243
>gi|418327134|ref|ZP_12938303.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU071]
gi|420184627|ref|ZP_14690736.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM040]
gi|365223527|gb|EHM64815.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU071]
gi|394257278|gb|EJE02200.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM040]
Length = 308
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLQTEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|307154737|ref|YP_003890121.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
gi|306984965|gb|ADN16846.1| porphobilinogen deaminase [Cyanothece sp. PCC 7822]
Length = 320
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +I+ +ID+AVHS+KD+PT L IL C +R
Sbjct: 71 EVGMIDHQIDLAVHSLKDLPTNLPSGLILGCVTERVDPADGLVVNEKHKDKQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL L M++ +
Sbjct: 131 VIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLTRLGMSDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C ++D ++ L L H+ TR ERAFL L+G C
Sbjct: 191 HQIIPSEISLHAVGQGALGIECRADDVEVLDLLKVLEHQATRDRCYAERAFLRELEGGC 249
>gi|163782608|ref|ZP_02177605.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882181|gb|EDP75688.1| porphobilinogen deaminase [Hydrogenivirga sp. 128-5-R1-1]
Length = 303
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 49/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ G ID+AVHS+KDVP + + L +RE
Sbjct: 63 EQALMEGRIDLAVHSLKDVPMVIPEGLTLGAITEREEPHDVLLSRDGGKLLELREGAKVG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG+ A + A AG+K + + VT +
Sbjct: 123 TSSLRRQVQLKRLRRDLEVEVLRGNVDTRVRKLKEGMYDAIILAYAGVKRMGYEDEVTEV 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QG++ I D++ + + LNH E+R CERAFL L+G C
Sbjct: 183 L--DYFIPAVGQGSLAIEIREGDEETLRLIEPLNHPESRVRAECERAFLRRLEGGC 236
>gi|27468263|ref|NP_764900.1| porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57867145|ref|YP_188808.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251811065|ref|ZP_04825538.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875909|ref|ZP_06284776.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|293366381|ref|ZP_06613060.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656109|ref|ZP_12305800.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028]
gi|417660333|ref|ZP_12309919.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045]
gi|417908774|ref|ZP_12552531.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU037]
gi|417911375|ref|ZP_12555082.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU105]
gi|417914614|ref|ZP_12558256.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU109]
gi|418412068|ref|ZP_12985333.1| porphobilinogen deaminase [Staphylococcus epidermidis BVS058A4]
gi|418603710|ref|ZP_13167091.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU041]
gi|418607475|ref|ZP_13170710.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU057]
gi|418608894|ref|ZP_13172071.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU065]
gi|418612460|ref|ZP_13175499.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU117]
gi|418618210|ref|ZP_13181089.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU120]
gi|418623624|ref|ZP_13186327.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU125]
gi|418626246|ref|ZP_13188865.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU126]
gi|418628847|ref|ZP_13191369.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU127]
gi|418663649|ref|ZP_13225160.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU081]
gi|419769274|ref|ZP_14295370.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771388|ref|ZP_14297442.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
IS-K]
gi|420163820|ref|ZP_14670554.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM095]
gi|420165645|ref|ZP_14672336.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM088]
gi|420168608|ref|ZP_14675216.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM087]
gi|420170363|ref|ZP_14676924.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM070]
gi|420173187|ref|ZP_14679682.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM067]
gi|420183321|ref|ZP_14689453.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM049]
gi|420187137|ref|ZP_14693159.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM039]
gi|420195734|ref|ZP_14701522.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM021]
gi|420196903|ref|ZP_14702637.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM020]
gi|420202302|ref|ZP_14707895.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM018]
gi|420209163|ref|ZP_14714601.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM003]
gi|420212209|ref|ZP_14717562.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM001]
gi|420221553|ref|ZP_14726482.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH08001]
gi|420225854|ref|ZP_14730681.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH06004]
gi|420227449|ref|ZP_14732217.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH05003]
gi|420229765|ref|ZP_14734468.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH04003]
gi|420232174|ref|ZP_14736815.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH051668]
gi|420234819|ref|ZP_14739379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH051475]
gi|421606846|ref|ZP_16048099.1| porphobilinogen deaminase [Staphylococcus epidermidis AU12-03]
gi|38258087|sp|Q8CNY8.1|HEM3_STAES RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71152115|sp|Q5HNN3.1|HEM3_STAEQ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|27315809|gb|AAO04944.1|AE016748_178 porphobilinogen deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57637803|gb|AAW54591.1| porphobilinogen deaminase [Staphylococcus epidermidis RP62A]
gi|251805400|gb|EES58057.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294934|gb|EFA87461.1| hydroxymethylbilane synthase [Staphylococcus epidermidis SK135]
gi|291319506|gb|EFE59873.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329733769|gb|EGG70095.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU045]
gi|329737359|gb|EGG73613.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU028]
gi|341651751|gb|EGS75547.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU109]
gi|341653698|gb|EGS77465.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU105]
gi|341656135|gb|EGS79858.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU037]
gi|374404996|gb|EHQ75955.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU057]
gi|374407028|gb|EHQ77897.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU041]
gi|374409655|gb|EHQ80435.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU065]
gi|374411321|gb|EHQ82036.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU081]
gi|374816452|gb|EHR80656.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU120]
gi|374819018|gb|EHR83150.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU117]
gi|374830117|gb|EHR93905.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU125]
gi|374833329|gb|EHR97018.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU126]
gi|374835371|gb|EHR98985.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU127]
gi|383358343|gb|EID35802.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
IS-250]
gi|383361614|gb|EID38984.1| hydroxymethylbilane synthase [Staphylococcus aureus subsp. aureus
IS-K]
gi|394232946|gb|EJD78557.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM095]
gi|394233317|gb|EJD78925.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM087]
gi|394235446|gb|EJD81018.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM088]
gi|394240365|gb|EJD85789.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM067]
gi|394240701|gb|EJD86124.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM070]
gi|394249217|gb|EJD94435.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM049]
gi|394256575|gb|EJE01504.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM039]
gi|394262973|gb|EJE07722.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM021]
gi|394266877|gb|EJE11495.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM020]
gi|394269710|gb|EJE14240.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM018]
gi|394279391|gb|EJE23699.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM003]
gi|394280049|gb|EJE24340.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM001]
gi|394290453|gb|EJE34310.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH08001]
gi|394293288|gb|EJE37011.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH06004]
gi|394297073|gb|EJE40685.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH05003]
gi|394298842|gb|EJE42403.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH04003]
gi|394301497|gb|EJE44953.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH051668]
gi|394304062|gb|EJE47472.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH051475]
gi|406657519|gb|EKC83905.1| porphobilinogen deaminase [Staphylococcus epidermidis AU12-03]
gi|410890082|gb|EKS37882.1| porphobilinogen deaminase [Staphylococcus epidermidis BVS058A4]
Length = 308
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|420198817|ref|ZP_14704503.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM031]
gi|394272998|gb|EJE17441.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM031]
Length = 308
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|242242934|ref|ZP_04797379.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
gi|420174576|ref|ZP_14681026.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM061]
gi|242233535|gb|EES35847.1| hydroxymethylbilane synthase [Staphylococcus epidermidis W23144]
gi|394245081|gb|EJD90408.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM061]
Length = 308
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|169829410|ref|YP_001699568.1| porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
gi|238058924|sp|B1HVD6.1|HEM3_LYSSC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|168993898|gb|ACA41438.1| Porphobilinogen deaminase [Lysinibacillus sphaericus C3-41]
Length = 310
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 76/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID AVHSMKD+P L + ++ C RE
Sbjct: 65 EQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELPAGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RL KL A + A AGLK L +E+V T
Sbjct: 125 TSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++D L AVAQG++GI C +D ++ L L + T Q ERAFL +DG C
Sbjct: 185 FLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMDGGC 241
>gi|153835503|ref|ZP_01988170.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156972662|ref|YP_001443569.1| porphobilinogen deaminase [Vibrio harveyi ATCC BAA-1116]
gi|166217790|sp|A7MXU9.1|HEM3_VIBHB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148867929|gb|EDL67139.1| porphobilinogen deaminase [Vibrio harveyi HY01]
gi|156524256|gb|ABU69342.1| hypothetical protein VIBHAR_00314 [Vibrio harveyi ATCC BAA-1116]
Length = 312
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGC 243
>gi|350529717|ref|ZP_08908658.1| porphobilinogen deaminase [Vibrio rotiferianus DAT722]
Length = 312
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGC 243
>gi|269961540|ref|ZP_06175903.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
gi|424029466|ref|ZP_17768999.1| porphobilinogen deaminase [Vibrio cholerae HENC-01]
gi|424038035|ref|ZP_17776699.1| porphobilinogen deaminase [Vibrio cholerae HENC-02]
gi|269833769|gb|EEZ87865.1| porphobilinogen deaminase [Vibrio harveyi 1DA3]
gi|408887000|gb|EKM25649.1| porphobilinogen deaminase [Vibrio cholerae HENC-01]
gi|408894855|gb|EKM31430.1| porphobilinogen deaminase [Vibrio cholerae HENC-02]
Length = 312
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGC 243
>gi|418630882|ref|ZP_13193354.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU128]
gi|418634998|ref|ZP_13197386.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU129]
gi|420190270|ref|ZP_14696214.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM037]
gi|420192598|ref|ZP_14698456.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM023]
gi|420204575|ref|ZP_14710133.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM015]
gi|374835756|gb|EHR99353.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU129]
gi|374836192|gb|EHR99780.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU128]
gi|394259161|gb|EJE04031.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM037]
gi|394260771|gb|EJE05575.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM023]
gi|394273585|gb|EJE18016.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM015]
Length = 308
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDVLLPAIGQGALGIECRSDDKELLDLLAKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|407804212|ref|ZP_11151039.1| porphobilinogen deaminase [Alcanivorax sp. W11-5]
gi|407021864|gb|EKE33624.1| porphobilinogen deaminase [Alcanivorax sp. W11-5]
Length = 310
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILP------------------------------ 31
EEA+ +G DIAVHSMKDVP L + LP
Sbjct: 67 EEAMRDGRADIAVHSMKDVPMVLPEGFALPVICERHDPRDAFVSPQYTGLAALPQGARVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RL KL+ G A L A AGLK L + +
Sbjct: 127 TSSLRRQAQLRAQRPDLSVTSLRGNVQTRLGKLDAGEFDAILLAAAGLKRLALDARIRCE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ++D +A L LN +T VV ERA L+G C
Sbjct: 187 LPPEVSLPAVGQGAVGIECRADDDAVAALLAPLNDVDTWDRVVAERAMNRRLEGGC 242
>gi|420214117|ref|ZP_14719397.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH05005]
gi|420216817|ref|ZP_14722011.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH05001]
gi|394284039|gb|EJE28200.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH05005]
gi|394291179|gb|EJE35003.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH05001]
Length = 308
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKSHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|424872731|ref|ZP_18296393.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393168432|gb|EJC68479.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 309
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L GE+D AVHS KD+ T L + L L RE
Sbjct: 69 EQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L + +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVITFRGLVETRLRKLEEGEVDATLLALAGLKRLGKVDVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D ++ L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDITTFDTVSCERAFLAALDGSC 244
>gi|420220602|ref|ZP_14725561.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH04008]
gi|394285955|gb|EJE30021.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIH04008]
Length = 303
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|56476047|ref|YP_157636.1| porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
gi|56312090|emb|CAI06735.1| Porphobilinogen deaminase [Aromatoleum aromaticum EbN1]
Length = 314
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E AL+ DIAVHSMKDVP L + LPC
Sbjct: 74 EAALLEERADIAVHSMKDVPMQLAEPFALPCISAREVPLDAFVSPRYASLADMPPGTVVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GN+ RLRKL+EG A + A AGL+ L + + +
Sbjct: 134 TSSLRRESQLHAQFPFLAVTSLRGNLDTRLRKLDEGQYDAIILAAAGLRRLGLADRIRAE 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L A QGA+GI C + +A +L LN +T V ERA L GSC
Sbjct: 194 LPSEVSLPAAGQGALGIECLAKRTDIAAWLAPLNDADTSACVRAERAVARALAGSC 249
>gi|417647344|ref|ZP_12297186.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144]
gi|329724698|gb|EGG61204.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU144]
Length = 308
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRIGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|310643595|ref|YP_003948353.1| phosphate ABC transporter ATPase [Paenibacillus polymyxa SC2]
gi|309248545|gb|ADO58112.1| Phosphate ABC transporter, ATPase subunit [Paenibacillus polymyxa
SC2]
gi|392304345|emb|CCI70708.1| porphobilinogen deaminase [Paenibacillus polymyxa M1]
Length = 308
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LPC----- 32
E+A++ GEID+AVHSMKD+P+ L + + LP
Sbjct: 69 EQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDLPSGAKVG 128
Query: 33 ---------------NLQRE---GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+LQ E GN+ +RL+KL A + A AGL + + +T+
Sbjct: 129 TSSLRRASQIKSMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKDRITSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ++D+++ L NH++T V ER FLG L+G C
Sbjct: 189 IPEEACLPAVGQGALGIECRASDEELLALLRLYNHQDTSATVEAERTFLGVLNGGC 244
>gi|212638453|ref|YP_002314973.1| porphobilinogen deaminase [Anoxybacillus flavithermus WK1]
gi|212559933|gb|ACJ32988.1| Porphobilinogen deaminase (hydroxymethylbilane synthase)
[Anoxybacillus flavithermus WK1]
Length = 313
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++GEID AVHSMKD+P L D ++ C +RE
Sbjct: 70 EQAMLDGEIDFAVHSMKDMPAVLPDGLVIGCVPKREDHRDVLISKGHIPFEQLPSGAIVG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL A + A AGL + E +T
Sbjct: 130 TSSLRRSAQLLAVRPDLQIQWIRGNIDTRLAKLQTDAYDAIILAAAGLHRMGWAKEVITQ 189
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D + AV QGA+ I C ND ++ +L L ++T +A ERAFL ++G C
Sbjct: 190 YLPTDICVPAVGQGALAIECRENDAELLHWLNKLTDKQTERATRAERAFLQHIEGGC 246
>gi|418615704|ref|ZP_13178643.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU118]
gi|374816754|gb|EHR80953.1| hydroxymethylbilane synthase [Staphylococcus epidermidis VCU118]
Length = 308
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDVLLPAIGQGALGIECRSDDKELLNLLAKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|296446253|ref|ZP_06888200.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
gi|296256290|gb|EFH03370.1| porphobilinogen deaminase [Methylosinus trichosporium OB3b]
Length = 308
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 75/174 (43%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL G ID+AVHS KD+PT+L + + L RE
Sbjct: 71 ALAEGRIDLAVHSSKDLPTHLPPEIAIAGFLPREDVRDAWIGRGGASLADLPQGAVVGTA 130
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNV+ RL K+ G + TL ALAGLK L + + T ILP
Sbjct: 131 SLRRGAQVKRLRPDVSVTLLRGNVETRLHKVESGEVDGTLLALAGLKRLGLADKATAILP 190
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++D L A QGAI I + D + L + T A+ ERAFL LDGSC
Sbjct: 191 LEDFLPAAGQGAIAITKRAGDARTRDALAPILDAATGAALAAERAFLTVLDGSC 244
>gi|433659068|ref|YP_007276447.1| Porphobilinogen deaminase [Vibrio parahaemolyticus BB22OP]
gi|432509756|gb|AGB11273.1| Porphobilinogen deaminase [Vibrio parahaemolyticus BB22OP]
Length = 312
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|428204429|ref|YP_007083018.1| hydroxymethylbilane synthase [Pleurocapsa sp. PCC 7327]
gi|427981861|gb|AFY79461.1| hydroxymethylbilane synthase [Pleurocapsa sp. PCC 7327]
Length = 320
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +I+ +ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMIDKQIDLAVHSLKDLPTKLPEGLILGCVTERVNPADALVVNEKHKDKQLETLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L M + +
Sbjct: 131 VIGTSSLRRLAQLRHHFPHLTFKDVRGNVNTRLSKLDAGEYDAIILAVAGLQRLGMGDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ D L AV QGA+GI C ++D ++ + L L H +TR ERAFL L+G C
Sbjct: 191 HQVISSDISLHAVGQGALGIECRADDAEVLEVLKVLEHAQTRDRCYAERAFLRELEGGC 249
>gi|417320696|ref|ZP_12107238.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329]
gi|328472411|gb|EGF43277.1| porphobilinogen deaminase [Vibrio parahaemolyticus 10329]
Length = 312
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSSIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|332706560|ref|ZP_08426621.1| hydroxymethylbilane synthase [Moorea producens 3L]
gi|332354444|gb|EGJ33923.1| hydroxymethylbilane synthase [Moorea producens 3L]
Length = 322
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ EID AVHS+KD+PT L + +L C +RE
Sbjct: 73 ELGMLRDEIDFAVHSLKDLPTRLPEGLVLGCVTERENPADALVMHQKHLDKQIETLPEGS 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGLK L+M++ +
Sbjct: 133 IIGTSSLRRLAQLRYHFPHLSFKDVRGNLNTRLAKLDAGDYDALILAVAGLKRLDMSDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C +D+++ + L ++ H T Q ER+ L L+G C
Sbjct: 193 HQILPPEISLHAVGQGALGIECREDDQEVLELLNAIAHPPTAQRCYAERSLLRALEGGC 251
>gi|428772866|ref|YP_007164654.1| hydroxymethylbilane synthase [Cyanobacterium stanieri PCC 7202]
gi|428687145|gb|AFZ47005.1| hydroxymethylbilane synthase [Cyanobacterium stanieri PCC 7202]
Length = 320
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +IN E+D AVHS+KD+PT L D +L C +R
Sbjct: 72 ELGMINNEVDFAVHSLKDLPTNLPDGLMLGCVSKRVNPADALVVNEKHKDKQLDTLPEGS 131
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L+M++ +
Sbjct: 132 VIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLDMSDRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C + D+++ + + ++ ++T + ERAFL L+G C
Sbjct: 192 HQVIPSEISLHAVGQGALGIECRTGDERVLEIIKAIQDQDTLDCTLAERAFLRVLEGGC 250
>gi|260771623|ref|ZP_05880543.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
gi|260613400|gb|EEX38599.1| porphobilinogen deaminase [Vibrio metschnikovii CIP 69.14]
Length = 312
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYHSLEALPHGAIVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + + +
Sbjct: 128 TCSLRRQCQIKAARPDIIIKELRGNVGTRLAKLDAGEFDAIVLAAAGLKRLKLEQRIASF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V+CERA TL G C
Sbjct: 188 ISPEQSLPAVGQGAVGIECRLDDQRLLTLLEPLNHADTYDRVICERAMNLTLQGGC 243
>gi|258404816|ref|YP_003197558.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
gi|257797043|gb|ACV67980.1| porphobilinogen deaminase [Desulfohalobium retbaense DSM 5692]
Length = 311
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G D+AVHSMKDVP L + L QRE
Sbjct: 65 EEAMLDGRADLAVHSMKDVPAELPEGLTLGVIPQREDYTDCLLSQHYTTLEEIPEGATIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+RKL EG+ A + A AGL+ L
Sbjct: 125 TSSLRRKTQLLRLRPDLVIQDLRGNLDTRIRKLEEGMFDAIVVASAGLRRLQTGARYMTE 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI + K + + LG L+H TR V+ ERAFL L+G C
Sbjct: 185 LAPPQFLPAVGQGALGIEYPEDRKDLEEMLGFLDHPPTRFCVLTERAFLHRLEGGC 240
>gi|17229370|ref|NP_485918.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
gi|17130968|dbj|BAB73577.1| porphobilinogen deaminase [Nostoc sp. PCC 7120]
Length = 336
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 86 EVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQIDTLPAGA 145
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G + A AGL+ L M + V
Sbjct: 146 VIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRLGMGDRV 205
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C ++D ++ L ++ H ETR + ER+FL +L+G C
Sbjct: 206 HQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRSLEGGC 264
>gi|251798413|ref|YP_003013144.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
gi|247546039|gb|ACT03058.1| porphobilinogen deaminase [Paenibacillus sp. JDR-2]
Length = 323
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LPC----- 32
E+AL++GEID+AVHSMKD+P L + + LP
Sbjct: 76 EQALLDGEIDMAVHSMKDMPYELPEGLMNGATPRRVDPRDCLIMKQGSSLDDLPAGARVG 135
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +R+RKL A + A AGL + + ++
Sbjct: 136 TSSLRRSSQLKNIRPDLKLDSIRGNIDSRIRKLETEGFDAVVLAAAGLSRMGWQDRISAF 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D + AV QGA+GI C + D + + L LN ET +V ER+FLG L+G C
Sbjct: 196 IPVDLSIPAVGQGALGIECRTADAGVRELLNLLNDTETSLSVRAERSFLGALNGGC 251
>gi|28899762|ref|NP_799367.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|153838754|ref|ZP_01991421.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|260365170|ref|ZP_05777735.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
gi|260878130|ref|ZP_05890485.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|260895813|ref|ZP_05904309.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|260900854|ref|ZP_05909249.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|32363175|sp|Q87KI9.1|HEM3_VIBPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28808014|dbj|BAC61251.1| porphobilinogen deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|149747840|gb|EDM58724.1| porphobilinogen deaminase [Vibrio parahaemolyticus AQ3810]
gi|308087192|gb|EFO36887.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus Peru-466]
gi|308092784|gb|EFO42479.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AN-5034]
gi|308110595|gb|EFO48135.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus AQ4037]
gi|308111033|gb|EFO48573.1| hydroxymethylbilane synthase [Vibrio parahaemolyticus K5030]
Length = 312
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>gi|24211755|sp|Q8YVU6.2|HEM3_ANASP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 323
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 73 EVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQIDTLPAGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G + A AGL+ L M + V
Sbjct: 133 VIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C ++D ++ L ++ H ETR + ER+FL +L+G C
Sbjct: 193 HQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRSLEGGC 251
>gi|308070414|ref|YP_003872019.1| porphobilinogen deaminase [Paenibacillus polymyxa E681]
gi|305859693|gb|ADM71481.1| Porphobilinogen deaminase [Paenibacillus polymyxa E681]
Length = 308
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------------------- 26
E+A++ GEID+AVHSMKD+P+ L +
Sbjct: 69 EQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPHREDPRDCLITLGAKSLEDLPQGAKVG 128
Query: 27 ----------KTILPCNLQRE---GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
K++ P +LQ E GN+ +RL+KL A + A AGL + E +T+
Sbjct: 129 TSSLRRASQIKSMRP-DLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKERITS 187
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D L AV QGA+GI C ++D+++ L N +T V ER FLG L+G C
Sbjct: 188 YIPEADCLPAVGQGALGIECRASDEELLALLRLYNDRDTSATVAAERTFLGVLNGGC 244
>gi|90421073|ref|ZP_01228976.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
gi|90334708|gb|EAS48485.1| porphobilinogen deaminase [Aurantimonas manganoxydans SI85-9A1]
Length = 311
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT----------YL----------------LDK-----TIL 30
E ALI+G +DIA HS KD+ T YL +D+ TI
Sbjct: 69 EAALIDGRVDIAAHSSKDMATASPEGLEVSAYLPREDVRDAFIGRTAATIDELPHGATIG 128
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ+RLRKL EG + ATL ALAGL + M + T I
Sbjct: 129 SASLRRQSLLKRMRPDLKVITFRGNVQSRLRKLEEGQVDATLLALAGLNRMAMQDVATEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L A QGAI I D+++ + ++ T A+ ERAFL LDGSC
Sbjct: 189 LEVERFLPAPGQGAICIQNRIGDERVHGLVAAIADPRTTVALTAERAFLAELDGSC 244
>gi|225175616|ref|ZP_03729610.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
gi|225168945|gb|EEG77745.1| porphobilinogen deaminase [Dethiobacter alkaliphilus AHT 1]
Length = 314
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ EID AVHSMKDVPT + D + +RE
Sbjct: 66 ENALLSKEIDFAVHSMKDVPTAVPDGLQITTITEREDPRDCYIAKDGKTRLFDTPQGAVI 125
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GN+ R RKL+E + + A AG+ L + +T
Sbjct: 126 GTSSLRRSAQLLHQRSDFEIVPIRGNLNTRFRKLSEQDMHGIILAYAGVYRLGWADKITE 185
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+ + L AV QGA+GI S+D + +LNH+ T A++ ERAFL L+G C
Sbjct: 186 IIDFEKSLPAVGQGALGIETRSDDDFTINIVSALNHDTTASAILAERAFLRQLEGGC 242
>gi|333370342|ref|ZP_08462353.1| hydroxymethylbilane synthase [Desmospora sp. 8437]
gi|332978074|gb|EGK14812.1| hydroxymethylbilane synthase [Desmospora sp. 8437]
Length = 367
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G ID AVHSMKD+P + + I +RE
Sbjct: 124 EQALLDGRIDFAVHSMKDMPGEMPEGLIFGAVTRREDPRDCLLSRKGEGLDDLPENACVG 183
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +KL +G A + A AG+ ++ T+ VT +
Sbjct: 184 TSSLRRQAQLLAYRPDLRVEPVRGNLNTRYQKLMDGQFDAIILAQAGIARMDWTDKVTQV 243
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + ML AV QGA+ + C +D+++ + L +N T +AV ER FL +G C
Sbjct: 244 VPEEVMLPAVGQGALAVQCRRDDQELLELLAEVNDPVTERAVTAERTFLQAFEGGC 299
>gi|350552066|ref|ZP_08921274.1| Porphobilinogen deaminase [Thiorhodospira sibirica ATCC 700588]
gi|349795394|gb|EGZ49194.1| Porphobilinogen deaminase [Thiorhodospira sibirica ATCC 700588]
Length = 317
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ GE DIAVHSMKDVP + LP L+RE
Sbjct: 67 EVGMLQGEADIAVHSMKDVPMAFPEGLYLPVILEREDPRDAFVSNHYASLADLPPTARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + +T +
Sbjct: 127 TSSMRRQCQLRARYPGFEILDLRGNVNTRLAKLDAGEYDAIILASAGLKRLGFAQRITAL 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L AV QGAIGI C D ++ + LN +T V ERAF L+G C
Sbjct: 187 IAPEDSLPAVGQGAIGIECREGDDEVLAVISHLNDADTLTRVSAERAFNTRLNGGC 242
>gi|241206704|ref|YP_002977800.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860594|gb|ACS58261.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 309
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L GE+D AVHS KD+ T L + L L RE
Sbjct: 69 EQKLAAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL +G + ATL ALAGLK L + +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVITFRGLVETRLRKLEQGEVDATLLALAGLKRLGKVDVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D ++ L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDARVDDLLAPVNDGPTFDTVSCERAFLAALDGSC 244
>gi|116254224|ref|YP_770062.1| porphobilinogen deaminase [Rhizobium leguminosarum bv. viciae 3841]
gi|115258872|emb|CAK09980.1| putative porphobilinogen deaminase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 309
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L GE+D AVHS KD+ T L + L L RE
Sbjct: 69 EQKLTAGELDFAVHSAKDMATKLPEGLYLSAYLPREDIRDAVIGRTARKLIDLPHGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + ATL ALAGLK L + +T+I
Sbjct: 129 SSSLRRQALIRRMRPDINVVTFRGLVETRLRKLEEGEVDATLLALAGLKRLGKVDVLTDI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D A AQGAI I D ++ L +N T V CERAFL LDGSC
Sbjct: 189 LDPDTFPPAPAQGAICIESRIGDARIDDLLAPVNDIMTFDTVSCERAFLAALDGSC 244
>gi|159900065|ref|YP_001546312.1| porphobilinogen deaminase [Herpetosiphon aurantiacus DSM 785]
gi|159893104|gb|ABX06184.1| porphobilinogen deaminase [Herpetosiphon aurantiacus DSM 785]
Length = 300
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+A+ NG++D+AVHS KD+P+ L + +R
Sbjct: 65 EDAMRNGKVDLAVHSAKDLPSILAPDMTIAAYPERADPRDVLVGAEGRRLADLVPGAKVG 124
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AGL+ L + + VT
Sbjct: 125 TSSPRRAAQLRHLRPDLTIIDIRGNVDTRLRKLDEGQYDAIVLAAAGLQRLGLLKRVTQF 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+M AV+QG +GI + D+++A L L+H E+R E+AFL T+ G C
Sbjct: 185 FEPAEMTPAVSQGILGIEARAGDQRVADLLKVLDHAESRATAEAEKAFLATIGGGC 240
>gi|403668367|ref|ZP_10933642.1| porphobilinogen deaminase [Kurthia sp. JC8E]
Length = 310
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P L ++ C +RE
Sbjct: 65 EQALYDKEIDFAVHSMKDMPAVLPKGLVIGCIPKREDPRDAFISKGHVKFADLPQGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RL KL A + A AGL+ L +E+V T
Sbjct: 125 TSSLRRSAQLLKVRPDLTIKWIRGNVDTRLNKLETEDYDAIILAAAGLRRLGWSEDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D + AVAQG++GI C +D ++ + L L T + ERAFL +DG C
Sbjct: 185 FLPVDLCMPAVAQGSLGIECREDDAELLEQLKKLTDRATWETAHAERAFLAAMDGGC 241
>gi|319942681|ref|ZP_08016988.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
gi|319803764|gb|EFW00699.1| hydroxymethylbilane synthase [Sutterella wadsworthensis 3_1_45B]
Length = 309
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTILP--------------- 31
E A++ G D+AVHS+KDVP L D + P
Sbjct: 68 EAAMLEGRADLAVHSLKDVPMELPEGFELVAVSEREDPRDAFVSPKYASLDDMPAGARVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RLRKL+EG A + A AGLK L + + + I
Sbjct: 128 TASLRRELMLRMRYPHLEVLPVRGNVGTRLRKLDEGQFDALVMASAGLKRLGLGDRIRQI 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L A QGA+GI D+KM LG +N ETR + ERA L GSC
Sbjct: 188 IPAEVSLPAPGQGALGIEIRKGDEKMEAALGFINSPETRACCMAERAVSRALGGSC 243
>gi|416125389|ref|ZP_11595987.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909]
gi|418328120|ref|ZP_12939245.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
14.1.R1.SE]
gi|420177970|ref|ZP_14684304.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM057]
gi|420181060|ref|ZP_14687266.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM053]
gi|319400986|gb|EFV89205.1| porphobilinogen deaminase [Staphylococcus epidermidis FRI909]
gi|365232298|gb|EHM73301.1| hydroxymethylbilane synthase [Staphylococcus epidermidis
14.1.R1.SE]
gi|394247157|gb|EJD92405.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM057]
gi|394247296|gb|EJD92542.1| hydroxymethylbilane synthase [Staphylococcus epidermidis NIHLM053]
Length = 308
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPDGLTLGCIPDREIPFDAYIAKNHIPLEELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDVLLPAIGQGALGIECRSDDKELLDLLTKVHNHDVAQCVTAERTFLSEMDGSC 241
>gi|376296475|ref|YP_005167705.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132]
gi|323459036|gb|EGB14901.1| porphobilinogen deaminase [Desulfovibrio desulfuricans ND132]
Length = 310
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
EEAL++G +AVHSMKDVPT L L+ I+P
Sbjct: 65 EEALLDGRAQLAVHSMKDVPTELPDGLEVGIIPEREEATDSLLSVKYDGLAGLPEGAVVG 124
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RL KL G A + A AGLK L M+ I
Sbjct: 125 TSSLRRQSQLCALRPDLKIETLRGNLDTRLNKLLNGEYDAIVLATAGLKRLAMSAPKQEI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AVAQGA+GI S D ++ L L+H T+ V+ ER FL LDG C
Sbjct: 185 LSPPEFLPAVAQGALGIEFRSADTEVRDLLAFLDHAPTKHQVLAERGFLTGLDGGC 240
>gi|255657374|ref|ZP_05402783.1| porphobilinogen deaminase [Clostridium difficile QCD-23m63]
gi|296448968|ref|ZP_06890759.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296879793|ref|ZP_06903766.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
gi|296262194|gb|EFH08998.1| hydroxymethylbilane synthase [Clostridium difficile NAP08]
gi|296429082|gb|EFH14956.1| hydroxymethylbilane synthase [Clostridium difficile NAP07]
Length = 301
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ G+IDIAVHSMKD+P+YL D +RE
Sbjct: 64 EQQLLYGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPRGAVI 123
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV+ R+RK+ + + + A +G+ N+ + +++
Sbjct: 124 GTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKISS 183
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D ++ A AQGA+ I SND K+ + SL E T ++ ER FL ++GSC
Sbjct: 184 YLPVDVVIPAPAQGALAIEIRSNDSKIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
>gi|372269471|ref|ZP_09505519.1| porphobilinogen deaminase [Marinobacterium stanieri S30]
Length = 312
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G DIAVHSMKDVP + LP +RE
Sbjct: 66 ENALLDGSADIAVHSMKDVPMEFPEGLGLPVICERERPTDAFVSNQYNNLDELPEGAIVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGL L + E +
Sbjct: 126 TSSLRREVQIRERRPDLQVNFLRGNVQTRLRKLDEGQYDAIILATAGLMRLELNERIRQE 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C ++D ++ + L L+H +T V+ ERA L+G C
Sbjct: 186 ITPEESLPAGGQGAVGIECRNDDAELIELLKPLHHADTASRVLAERALNRRLEGGC 241
>gi|296138401|ref|YP_003645644.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
gi|296026535|gb|ADG77305.1| porphobilinogen deaminase [Tsukamurella paurometabola DSM 20162]
Length = 318
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 75/175 (42%), Gaps = 47/175 (26%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
+AL NGE+D+AVHS KD+PT D+ +L RE
Sbjct: 73 DALANGEVDVAVHSYKDLPTAPDDRLVLAAVPPREDSRDALVARDGMVLGELPAGSVVGT 132
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GN+ +RLRK+ +G + A + ALAGLK + + VT L
Sbjct: 133 SSPRRATQLTALGLGLEIRPLRGNLDSRLRKVADGELDAIVVALAGLKRIGRHDEVTEAL 192
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A AQGA+ + C D + L L+ TR AV ERA L L+ C
Sbjct: 193 DPVQMLPAPAQGALAVECRRGDADLQSVLSELDDHWTRAAVTAERALLAELEAGC 247
>gi|427719513|ref|YP_007067507.1| hydroxymethylbilane synthase [Calothrix sp. PCC 7507]
gi|427351949|gb|AFY34673.1| hydroxymethylbilane synthase [Calothrix sp. PCC 7507]
Length = 323
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 73 ELGMINQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVLHEKHKGLQIDTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ R+ KL+ G A + A+AGL+ L M++ +
Sbjct: 133 VIGTSSLRRLAQLRNKFPHFNFKDVRGNLITRMAKLDAGEYDALILAVAGLERLGMSDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C ++D ++ L ++ H TR + ERAFL L+G C
Sbjct: 193 HQILPKEISLHAVGQGALGIECRADDTELISLLKAIEHPPTRDRCLAERAFLRDLEGGC 251
>gi|269103733|ref|ZP_06156430.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268163631|gb|EEZ42127.1| porphobilinogen deaminase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 294
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G DIAVHSMKDVP TI LP
Sbjct: 51 EVAMLEGRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNRYNSLEELPQGSIVG 110
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ + GNV RLRKL++G A + A AGLK L M + +
Sbjct: 111 TSSLRRQCQLRSQRPDLIVKDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRAA 170
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D ++ L +LNH+ET V+CERA L G C
Sbjct: 171 IAPETSLPAVGQGAVGIECRLDDTRVRDLLAALNHQETATRVLCERAMNNRLQGGC 226
>gi|425743753|ref|ZP_18861823.1| hydroxymethylbilane synthase [Acinetobacter baumannii WC-323]
gi|425493075|gb|EKU59322.1| hydroxymethylbilane synthase [Acinetobacter baumannii WC-323]
Length = 348
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + L +RE
Sbjct: 108 EAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYQHFDELPQGAKVG 167
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L +++ + +
Sbjct: 168 TSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLSDRIRHC 227
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C +ND + K + L HEET V ERAF L+G C
Sbjct: 228 LAPVLSLPAVGQGALGLECRANDNALLKLIQPLQHEETSICVRAERAFNAYLEGGC 283
>gi|354559675|ref|ZP_08978921.1| Porphobilinogen deaminase [Desulfitobacterium metallireducens DSM
15288]
gi|353540981|gb|EHC10452.1| Porphobilinogen deaminase [Desulfitobacterium metallireducens DSM
15288]
Length = 306
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD-------------------------------KTIL 30
E L+ E+D+AVHS+KD+PT L + I
Sbjct: 65 ENGLLRDEVDLAVHSLKDLPTILPEGLSIGAICEREEPRDVFLSKDGTRLEDLPPGSVIG 124
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q R RKL E + + A AG+K L E +T +
Sbjct: 125 TSSLRRKAQLQHYRADLNFADLRGNLQTRWRKLEESAMAGIVLAYAGVKRLGWEERITQL 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D ML AV QG+I I ++ + + + L L+HEET AV ERA + L+G C
Sbjct: 185 IPEDIMLSAVGQGSIAIEISTERQDIYELLKPLHHEETSLAVRAERALMRRLEGGC 240
>gi|441506525|ref|ZP_20988493.1| Porphobilinogen deaminase [Photobacterium sp. AK15]
gi|441425731|gb|ELR63225.1| Porphobilinogen deaminase [Photobacterium sp. AK15]
Length = 310
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 67 EVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNNIDELPAGAVVG 126
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ + GNV RLRKL++G A + A AGLK L M + +
Sbjct: 127 TSSLRRQCQLRAQRPDLVVKDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L +LNH+ET V+CERA L G C
Sbjct: 187 IAPETSLPAVGQGAVGIECRLDDQRVRDLLDALNHQETATRVLCERAMNNRLQGGC 242
>gi|113478006|ref|YP_724067.1| porphobilinogen deaminase [Trichodesmium erythraeum IMS101]
gi|110169054|gb|ABG53594.1| hydroxymethylbilane synthase [Trichodesmium erythraeum IMS101]
Length = 320
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ E D+AVHS+KD+PT L + IL C +RE
Sbjct: 71 ELGMLQNETDLAVHSLKDLPTNLPEGLILGCVTERENPADALVLHEKLKDKQLETLPEGA 130
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL L M++ +
Sbjct: 131 VIGTSSLRRLAQLRYHFPHLEFKDVRGNLNTRLAKLDAGEYDALILAFAGLHRLGMSDRI 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C + D + L SL H T Q ERAFL L+G C
Sbjct: 191 HQIIPPEISLHAVGQGALGIECRAGDNNILNLLKSLEHTATAQRCYAERAFLRELEGGC 249
>gi|209526164|ref|ZP_03274695.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
gi|376005133|ref|ZP_09782681.1| Porphobilinogen deaminase [Arthrospira sp. PCC 8005]
gi|423065455|ref|ZP_17054245.1| porphobilinogen deaminase [Arthrospira platensis C1]
gi|209493420|gb|EDZ93744.1| porphobilinogen deaminase [Arthrospira maxima CS-328]
gi|375326491|emb|CCE18434.1| Porphobilinogen deaminase [Arthrospira sp. PCC 8005]
gi|406713148|gb|EKD08322.1| porphobilinogen deaminase [Arthrospira platensis C1]
Length = 322
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N + D+AVHS+KD+PT L + +L C +RE
Sbjct: 73 EVGMLNHDTDMAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVHENHRDKQLDTLPPGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL+KL+EG A + A+AGLK L M + +
Sbjct: 133 VVGTSSLRRLAQLRHNFPHLEFKDIRGNLNTRLQKLDEGQYDAIILAVAGLKRLGMADRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+G+ C D ++ + + +L H T Q ERAFL L+G C
Sbjct: 193 HQVIPAEISLHAVGQGALGLECREGDTEIFEVVKALEHTVTAQRCHSERAFLRELEGGC 251
>gi|421464378|ref|ZP_15913068.1| hydroxymethylbilane synthase [Acinetobacter radioresistens
WC-A-157]
gi|400205131|gb|EJO36112.1| hydroxymethylbilane synthase [Acinetobacter radioresistens
WC-A-157]
Length = 307
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L LP +RE
Sbjct: 66 EAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKGATVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L ++E + +
Sbjct: 126 TSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSERIKHT 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+G+ C ++D+ + + L HE+T V ERAF L+G C
Sbjct: 186 LSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241
>gi|255320960|ref|ZP_05362133.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262379948|ref|ZP_06073103.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
gi|255301924|gb|EET81168.1| porphobilinogen deaminase [Acinetobacter radioresistens SK82]
gi|262298142|gb|EEY86056.1| porphobilinogen deaminase [Acinetobacter radioresistens SH164]
Length = 307
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L LP +RE
Sbjct: 66 EAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKGATVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L ++E + +
Sbjct: 126 TSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSERIKHT 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+G+ C ++D+ + + L HE+T V ERAF L+G C
Sbjct: 186 LSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241
>gi|421856852|ref|ZP_16289211.1| porphobilinogen deaminase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|403187754|dbj|GAB75412.1| porphobilinogen deaminase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 307
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L LP +RE
Sbjct: 66 EAALLDGRADLAVHSMKDVPMHLPTGLSLPVICEREDPCDAFVSNRFEGFEQLPKGATVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L ++E + +
Sbjct: 126 TSSLRRKTQILKARPDLNILDLRGNVGTRLSKLDAGEYDAIILASAGLKRLGLSERIKHT 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+G+ C ++D+ + + L HE+T V ERAF L+G C
Sbjct: 186 LSPELSLPAVGQGALGLECRTDDQAILDLISPLQHEQTSICVRAERAFNSHLEGGC 241
>gi|303247619|ref|ZP_07333890.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
gi|302491099|gb|EFL50993.1| porphobilinogen deaminase [Desulfovibrio fructosovorans JJ]
Length = 310
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY--------LLDKTILPCN-------------------- 33
EEAL++G D+AVHSMKDVP + K PC+
Sbjct: 66 EEALLDGRADLAVHSMKDVPAEQPAGLVVGITPKREDPCDMLLSVAYDGLDALPEGAKVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GN+ R+ KL +G+ A + A AGL L ++ +
Sbjct: 126 TSSLRRKAQLTALRPDLAIVDLRGNLDTRVGKLTDGLFDAIVVARAGLNRLGLSAPKSER 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L A AQGA+GI +D++ A L +H E+R AV ERAFLG L+G C
Sbjct: 186 LCPPRFLPAAAQGALGIEYRFDDRETAAMLAFFDHPESRDAVAAERAFLGRLEGGC 241
>gi|217969858|ref|YP_002355092.1| porphobilinogen deaminase [Thauera sp. MZ1T]
gi|217507185|gb|ACK54196.1| porphobilinogen deaminase [Thauera sp. MZ1T]
Length = 310
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E AL++G DIAVHSMKDVP + + LPC
Sbjct: 70 ETALLDGRADIAVHSMKDVPMVMEPEFALPCITAREVPLDAFVSSRYESLADMPPGAVVG 129
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GN+ RLRKL+EG A + A AGL L + E + ++
Sbjct: 130 TSSLRRESQIHAQYPFLGVTSLRGNLDTRLRKLDEGQYDAIILAAAGLTRLGLGERIRSV 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L A QGA+GI C S + +L L +T V+ ERA L GSC
Sbjct: 190 MPAEVSLPAAGQGALGIECLSARADVIGWLQPLVDADTTACVLAERAVARALAGSC 245
>gi|120602319|ref|YP_966719.1| porphobilinogen deaminase [Desulfovibrio vulgaris DP4]
gi|158513905|sp|A1VCX6.1|HEM3_DESVV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|120562548|gb|ABM28292.1| hydroxymethylbilane synthase [Desulfovibrio vulgaris DP4]
Length = 315
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHSMKDVP L + L C +RE
Sbjct: 66 EEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL +G A + A AGLK L ++ +
Sbjct: 126 TSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLSAPHHEV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI + + L L+H TR V ER FL L+G C
Sbjct: 186 LAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGC 241
>gi|75910970|ref|YP_325266.1| porphobilinogen deaminase [Anabaena variabilis ATCC 29413]
gi|75704695|gb|ABA24371.1| hydroxymethylbilane synthase [Anabaena variabilis ATCC 29413]
Length = 336
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 86 EVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQIDTLPAGA 145
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G + A AGL+ L M + +
Sbjct: 146 VIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRLGMGDRI 205
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C +ND ++ L ++ H +TR + ER+FL +L+G C
Sbjct: 206 HQVLPKEVSLHAVGQGALGIECRANDAELITILKAIEHPQTRDRCLAERSFLRSLEGGC 264
>gi|433461284|ref|ZP_20418894.1| porphobilinogen deaminase [Halobacillus sp. BAB-2008]
gi|432190111|gb|ELK47154.1| porphobilinogen deaminase [Halobacillus sp. BAB-2008]
Length = 309
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 82/177 (46%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A+ +G+ID+AVHSMKD+P + + + LP
Sbjct: 65 EQAMYDGDIDMAVHSMKDMPAVVAEGLVVASVPIREDHRDAFVSVGNVALKDLPTGAVVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
+L+R GN+ RL+KL+E A + A AGLK + ++V T
Sbjct: 125 TSSLRRGSQIKAVRPDLEIKWIRGNIDTRLKKLHEEDYDAIILAAAGLKRMGWDDDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QGA+ I C +DK++ YL LNHE T V ER FL L+G C
Sbjct: 185 YLEPDVCVPAVGQGALAIQCREDDKELRDYLMKLNHEYTSSTVTAERKFLHDLNGGC 241
>gi|87306341|ref|ZP_01088488.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
gi|87290520|gb|EAQ82407.1| porphobilinogen deaminase [Blastopirellula marina DSM 3645]
Length = 308
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL------------------------DKTILP------ 31
+ AL++ ID+AVHS+KD+PT + D LP
Sbjct: 62 QAALLDNRIDVAVHSLKDLPTEAVVGLRLAAVPARGADGDVLITSKASDVLGLPQESIIG 121
Query: 32 ----------CNLQRE-------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RLRKL++G+ A + A AGL+ L + E + ++
Sbjct: 122 TGSMRRKAQLLHLRRDFQIRDIRGNLDTRLRKLDDGLYDAIILAEAGLRRLELIERIRHV 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ML AV QGA+G+ D A L LNHE++ +V+ ER+ L L G C
Sbjct: 182 IPKAQMLPAVGQGALGLEIRERDSATAAMLAPLNHEDSHYSVLAERSMLRNLRGGC 237
>gi|22299189|ref|NP_682436.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
gi|39931549|sp|Q8DIE4.1|HEM3_THEEB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|22295371|dbj|BAC09198.1| porphobilinogen deaminase [Thermosynechococcus elongatus BP-1]
Length = 320
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +++ GE D+AVHS+KD+PT L D +L +RE
Sbjct: 70 ELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTIDTLPEGT 129
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGL+ L + +
Sbjct: 130 VIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRRLGFGDRI 189
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +LP L AV QGA+GI C + D + + +L H ET + ERAFL L+G C
Sbjct: 190 SQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLRQLEGGC 248
>gi|347754159|ref|YP_004861723.1| hydroxymethylbilane synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347586677|gb|AEP11207.1| hydroxymethylbilane synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 318
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 72/177 (40%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G +D+AVHS+KD+PT L D L C QRE
Sbjct: 75 EEALLAGVVDLAVHSLKDLPTRLPDGLKLGCVTQREDVRDALVARDGIRSLDELPPRAII 134
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV RL++++EG A + A AGL L +
Sbjct: 135 GTSSLRRQAQLLARRPDLQLADLRGNVGTRLQRVDEGRYDAIILAAAGLSRLGFEARIAQ 194
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D ML AV QGA+GI D + L H T A ERAFL L G C
Sbjct: 195 RIPTDIMLPAVGQGALGIEIREGDSTTQAAIEVLAHHRTWHACEAERAFLHGLGGGC 251
>gi|428220820|ref|YP_007104990.1| hydroxymethylbilane synthase [Synechococcus sp. PCC 7502]
gi|427994160|gb|AFY72855.1| hydroxymethylbilane synthase [Synechococcus sp. PCC 7502]
Length = 315
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++GE+D AVHS+KD+PT L D +L +RE
Sbjct: 67 EDAMLSGEVDFAVHSLKDLPTNLPDGLMLGAVTKRENPADALVINAKYKDHKLDSLPAGA 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G + A+AGL+ L M + V
Sbjct: 127 VIGTSSLRRLAQLRHYYPHLSFKDIRGNLNTRLAKLDAGEYDGIILAVAGLERLGMGDRV 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+ D L AV QGA+GI C +ND+++ + ET Q + ERAFL L+G C
Sbjct: 187 DEIISPDISLHAVGQGALGIECRTNDEEILNLFAPIADVETTQRCLAERAFLRELEGGC 245
>gi|365540300|ref|ZP_09365475.1| porphobilinogen deaminase [Vibrio ordalii ATCC 33509]
Length = 312
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 53/179 (29%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYLLDKTI--LP--- 31
E A++ G D+AVHSMKDVP TY ++I LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTY---QSIEQLPQGA 124
Query: 32 ----CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
C+L+R+ GNV RL KL+ G A + A AGLK L + E +
Sbjct: 125 IVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEERI 184
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+I+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL+G C
Sbjct: 185 RSIIEPEQSLPAVGQGAVGIECRLDDERLRALLAPLNHSDTADRVKCERAMNLTLEGGC 243
>gi|417822284|ref|ZP_12468885.1| porphobilinogen deaminase [Vibrio cholerae HE48]
gi|422921372|ref|ZP_16954611.1| porphobilinogen deaminase [Vibrio cholerae BJG-01]
gi|340049720|gb|EGR10633.1| porphobilinogen deaminase [Vibrio cholerae HE48]
gi|341649178|gb|EGS73173.1| porphobilinogen deaminase [Vibrio cholerae BJG-01]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|12655813|gb|AAK00605.1|AF221100_2 porphobilinogen deaminase [Selenomonas ruminantium subsp.
ruminantium]
Length = 313
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 47/173 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLD----------------------KTI--LPC-------N 33
+++G ID+AVHS+KD+PT L + KT LPC +
Sbjct: 70 MLSGGIDLAVHSLKDMPTELPEGLTLAAITKRFDPGDAVVSPKFKTFAALPCGAKVGTSS 129
Query: 34 LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
L+R+ GNV RL KL A + A+AGLK L E +T +LP
Sbjct: 130 LRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLGFGERITEVLPR 189
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L AV QGA+ I +D M + L LN E T ERAFLG ++G C
Sbjct: 190 DMVLPAVGQGALAIETREDDADMREMLAFLNDEATVHCAKAERAFLGRVEGGC 242
>gi|153214841|ref|ZP_01949649.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|153830620|ref|ZP_01983287.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
gi|124115084|gb|EAY33904.1| porphobilinogen deaminase [Vibrio cholerae 1587]
gi|148873892|gb|EDL72027.1| porphobilinogen deaminase [Vibrio cholerae 623-39]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|254291929|ref|ZP_04962710.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
gi|417818719|ref|ZP_12465340.1| porphobilinogen deaminase [Vibrio cholerae HE39]
gi|421348996|ref|ZP_15799366.1| porphobilinogen deaminase [Vibrio cholerae HE-25]
gi|423943399|ref|ZP_17733060.1| porphobilinogen deaminase [Vibrio cholerae HE-40]
gi|423973253|ref|ZP_17736605.1| porphobilinogen deaminase [Vibrio cholerae HE-46]
gi|150422139|gb|EDN14105.1| porphobilinogen deaminase [Vibrio cholerae AM-19226]
gi|340044068|gb|EGR05023.1| porphobilinogen deaminase [Vibrio cholerae HE39]
gi|395956845|gb|EJH67435.1| porphobilinogen deaminase [Vibrio cholerae HE-25]
gi|408662562|gb|EKL33494.1| porphobilinogen deaminase [Vibrio cholerae HE-40]
gi|408666557|gb|EKL37341.1| porphobilinogen deaminase [Vibrio cholerae HE-46]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|34101365|gb|AAQ57734.1| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
Length = 295
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G D+AVHS+KDVP L D L +RE
Sbjct: 51 EQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVG 110
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL++G A + A AGLK L + E +
Sbjct: 111 TSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGE 170
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A QGA+GI ++ ++ L LNH +TR ERA L GSC
Sbjct: 171 LAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 226
>gi|229520088|ref|ZP_04409516.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
gi|229342876|gb|EEO07866.1| porphobilinogen deaminase [Vibrio cholerae TM 11079-80]
Length = 317
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 73 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 133 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 193 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 248
>gi|161594062|ref|NP_899724.2| porphobilinogen deaminase [Chromobacterium violaceum ATCC 12472]
gi|55976482|sp|Q7P207.2|HEM3_CHRVO RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 309
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G D+AVHS+KDVP L D L +RE
Sbjct: 65 EQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL++G A + A AGLK L + E +
Sbjct: 125 TSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGE 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A QGA+GI ++ ++ L LNH +TR ERA L GSC
Sbjct: 185 LAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 240
>gi|255743926|ref|ZP_05417881.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262151165|ref|ZP_06028304.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262167035|ref|ZP_06034752.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262189994|ref|ZP_06048299.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
gi|360036658|ref|YP_004938421.1| porphobilinogen deaminase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740016|ref|YP_005331985.1| porphobilinogen deaminase [Vibrio cholerae IEC224]
gi|417811200|ref|ZP_12457867.1| porphobilinogen deaminase [Vibrio cholerae HC-49A2]
gi|417814954|ref|ZP_12461596.1| porphobilinogen deaminase [Vibrio cholerae HCUF01]
gi|418330830|ref|ZP_12941792.1| porphobilinogen deaminase [Vibrio cholerae HC-06A1]
gi|418335796|ref|ZP_12944700.1| porphobilinogen deaminase [Vibrio cholerae HC-23A1]
gi|418342364|ref|ZP_12949180.1| porphobilinogen deaminase [Vibrio cholerae HC-28A1]
gi|418347539|ref|ZP_12952280.1| porphobilinogen deaminase [Vibrio cholerae HC-43A1]
gi|418353035|ref|ZP_12955763.1| porphobilinogen deaminase [Vibrio cholerae HC-61A1]
gi|419824589|ref|ZP_14348101.1| porphobilinogen deaminase [Vibrio cholerae CP1033(6)]
gi|421315392|ref|ZP_15765967.1| porphobilinogen deaminase [Vibrio cholerae CP1032(5)]
gi|421318917|ref|ZP_15769480.1| porphobilinogen deaminase [Vibrio cholerae CP1038(11)]
gi|421322971|ref|ZP_15773505.1| porphobilinogen deaminase [Vibrio cholerae CP1041(14)]
gi|421326422|ref|ZP_15776942.1| porphobilinogen deaminase [Vibrio cholerae CP1042(15)]
gi|421330348|ref|ZP_15780835.1| porphobilinogen deaminase [Vibrio cholerae CP1046(19)]
gi|421337481|ref|ZP_15787940.1| porphobilinogen deaminase [Vibrio cholerae CP1048(21)]
gi|421337855|ref|ZP_15788298.1| porphobilinogen deaminase [Vibrio cholerae HC-20A2]
gi|421348787|ref|ZP_15799162.1| porphobilinogen deaminase [Vibrio cholerae HC-46A1]
gi|422890150|ref|ZP_16932598.1| porphobilinogen deaminase [Vibrio cholerae HC-40A1]
gi|422900935|ref|ZP_16936348.1| porphobilinogen deaminase [Vibrio cholerae HC-48A1]
gi|422905119|ref|ZP_16939996.1| porphobilinogen deaminase [Vibrio cholerae HC-70A1]
gi|422911867|ref|ZP_16946407.1| porphobilinogen deaminase [Vibrio cholerae HFU-02]
gi|422924332|ref|ZP_16957393.1| porphobilinogen deaminase [Vibrio cholerae HC-38A1]
gi|423143394|ref|ZP_17131023.1| porphobilinogen deaminase [Vibrio cholerae HC-19A1]
gi|423148376|ref|ZP_17135748.1| porphobilinogen deaminase [Vibrio cholerae HC-21A1]
gi|423152162|ref|ZP_17139387.1| porphobilinogen deaminase [Vibrio cholerae HC-22A1]
gi|423154956|ref|ZP_17142102.1| porphobilinogen deaminase [Vibrio cholerae HC-32A1]
gi|423158820|ref|ZP_17145801.1| porphobilinogen deaminase [Vibrio cholerae HC-33A2]
gi|423163481|ref|ZP_17150292.1| porphobilinogen deaminase [Vibrio cholerae HC-48B2]
gi|423729493|ref|ZP_17702831.1| porphobilinogen deaminase [Vibrio cholerae HC-17A1]
gi|423745273|ref|ZP_17711009.1| porphobilinogen deaminase [Vibrio cholerae HC-50A2]
gi|423889548|ref|ZP_17725048.1| porphobilinogen deaminase [Vibrio cholerae HC-62A1]
gi|423922961|ref|ZP_17729660.1| porphobilinogen deaminase [Vibrio cholerae HC-77A1]
gi|424000667|ref|ZP_17743771.1| porphobilinogen deaminase [Vibrio cholerae HC-17A2]
gi|424004829|ref|ZP_17747828.1| porphobilinogen deaminase [Vibrio cholerae HC-37A1]
gi|424022626|ref|ZP_17762303.1| porphobilinogen deaminase [Vibrio cholerae HC-62B1]
gi|424025645|ref|ZP_17765276.1| porphobilinogen deaminase [Vibrio cholerae HC-69A1]
gi|424585017|ref|ZP_18024625.1| porphobilinogen deaminase [Vibrio cholerae CP1030(3)]
gi|424589390|ref|ZP_18028849.1| porphobilinogen deaminase [Vibrio cholerae CP1037(10)]
gi|424593644|ref|ZP_18032999.1| porphobilinogen deaminase [Vibrio cholerae CP1040(13)]
gi|424597574|ref|ZP_18036787.1| porphobilinogen deaminase [Vibrio Cholerae CP1044(17)]
gi|424605250|ref|ZP_18044230.1| porphobilinogen deaminase [Vibrio cholerae CP1050(23)]
gi|424608973|ref|ZP_18047846.1| porphobilinogen deaminase [Vibrio cholerae HC-39A1]
gi|424611885|ref|ZP_18050707.1| porphobilinogen deaminase [Vibrio cholerae HC-41A1]
gi|424615771|ref|ZP_18054477.1| porphobilinogen deaminase [Vibrio cholerae HC-42A1]
gi|424620524|ref|ZP_18059064.1| porphobilinogen deaminase [Vibrio cholerae HC-47A1]
gi|424643341|ref|ZP_18081111.1| porphobilinogen deaminase [Vibrio cholerae HC-56A2]
gi|424651271|ref|ZP_18088808.1| porphobilinogen deaminase [Vibrio cholerae HC-57A2]
gi|424655224|ref|ZP_18092537.1| porphobilinogen deaminase [Vibrio cholerae HC-81A2]
gi|440711961|ref|ZP_20892588.1| porphobilinogen deaminase [Vibrio cholerae 4260B]
gi|443502176|ref|ZP_21069180.1| porphobilinogen deaminase [Vibrio cholerae HC-64A1]
gi|443506075|ref|ZP_21072886.1| porphobilinogen deaminase [Vibrio cholerae HC-65A1]
gi|443509911|ref|ZP_21076597.1| porphobilinogen deaminase [Vibrio cholerae HC-67A1]
gi|443513754|ref|ZP_21080311.1| porphobilinogen deaminase [Vibrio cholerae HC-68A1]
gi|443517558|ref|ZP_21083997.1| porphobilinogen deaminase [Vibrio cholerae HC-71A1]
gi|443522147|ref|ZP_21088409.1| porphobilinogen deaminase [Vibrio cholerae HC-72A2]
gi|443529080|ref|ZP_21095102.1| porphobilinogen deaminase [Vibrio cholerae HC-7A1]
gi|443533817|ref|ZP_21099753.1| porphobilinogen deaminase [Vibrio cholerae HC-80A1]
gi|443536639|ref|ZP_21102499.1| porphobilinogen deaminase [Vibrio cholerae HC-81A1]
gi|449054789|ref|ZP_21733457.1| Porphobilinogen deaminase [Vibrio cholerae O1 str. Inaba G4222]
gi|11386839|sp|Q9KVM1.2|HEM3_VIBCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|255738409|gb|EET93799.1| porphobilinogen deaminase [Vibrio cholera CIRS 101]
gi|262024553|gb|EEY43237.1| porphobilinogen deaminase [Vibrio cholerae RC27]
gi|262031059|gb|EEY49684.1| porphobilinogen deaminase [Vibrio cholerae INDRE 91/1]
gi|262034117|gb|EEY52552.1| porphobilinogen deaminase [Vibrio cholerae CT 5369-93]
gi|340045799|gb|EGR06738.1| porphobilinogen deaminase [Vibrio cholerae HCUF01]
gi|340046125|gb|EGR07059.1| porphobilinogen deaminase [Vibrio cholerae HC-49A2]
gi|341626843|gb|EGS52199.1| porphobilinogen deaminase [Vibrio cholerae HC-70A1]
gi|341628378|gb|EGS53636.1| porphobilinogen deaminase [Vibrio cholerae HC-48A1]
gi|341628636|gb|EGS53859.1| porphobilinogen deaminase [Vibrio cholerae HC-40A1]
gi|341641987|gb|EGS66498.1| porphobilinogen deaminase [Vibrio cholerae HFU-02]
gi|341649255|gb|EGS73249.1| porphobilinogen deaminase [Vibrio cholerae HC-38A1]
gi|356422929|gb|EHH76392.1| porphobilinogen deaminase [Vibrio cholerae HC-06A1]
gi|356423655|gb|EHH77096.1| porphobilinogen deaminase [Vibrio cholerae HC-21A1]
gi|356427803|gb|EHH81043.1| porphobilinogen deaminase [Vibrio cholerae HC-19A1]
gi|356434616|gb|EHH87793.1| porphobilinogen deaminase [Vibrio cholerae HC-23A1]
gi|356435990|gb|EHH89125.1| porphobilinogen deaminase [Vibrio cholerae HC-22A1]
gi|356438876|gb|EHH91878.1| porphobilinogen deaminase [Vibrio cholerae HC-28A1]
gi|356445571|gb|EHH98374.1| porphobilinogen deaminase [Vibrio cholerae HC-32A1]
gi|356448624|gb|EHI01387.1| porphobilinogen deaminase [Vibrio cholerae HC-43A1]
gi|356451280|gb|EHI03975.1| porphobilinogen deaminase [Vibrio cholerae HC-33A2]
gi|356455548|gb|EHI08189.1| porphobilinogen deaminase [Vibrio cholerae HC-61A1]
gi|356456854|gb|EHI09435.1| porphobilinogen deaminase [Vibrio cholerae HC-48B2]
gi|356647812|gb|AET27867.1| porphobilinogen deaminase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793526|gb|AFC56997.1| porphobilinogen deaminase [Vibrio cholerae IEC224]
gi|395924137|gb|EJH34946.1| porphobilinogen deaminase [Vibrio cholerae CP1032(5)]
gi|395925320|gb|EJH36120.1| porphobilinogen deaminase [Vibrio cholerae CP1041(14)]
gi|395926459|gb|EJH37242.1| porphobilinogen deaminase [Vibrio cholerae CP1038(11)]
gi|395929104|gb|EJH39855.1| porphobilinogen deaminase [Vibrio cholerae CP1048(21)]
gi|395935956|gb|EJH46690.1| porphobilinogen deaminase [Vibrio cholerae CP1042(15)]
gi|395936346|gb|EJH47071.1| porphobilinogen deaminase [Vibrio cholerae CP1046(19)]
gi|395939198|gb|EJH49881.1| porphobilinogen deaminase [Vibrio cholerae HC-46A1]
gi|395948120|gb|EJH58774.1| porphobilinogen deaminase [Vibrio cholerae HC-20A2]
gi|395965003|gb|EJH75190.1| porphobilinogen deaminase [Vibrio cholerae HC-56A2]
gi|395965202|gb|EJH75381.1| porphobilinogen deaminase [Vibrio cholerae HC-57A2]
gi|395967833|gb|EJH77873.1| porphobilinogen deaminase [Vibrio cholerae HC-42A1]
gi|395977020|gb|EJH86450.1| porphobilinogen deaminase [Vibrio cholerae HC-47A1]
gi|395979664|gb|EJH89002.1| porphobilinogen deaminase [Vibrio cholerae CP1030(3)]
gi|408011343|gb|EKG49164.1| porphobilinogen deaminase [Vibrio cholerae HC-39A1]
gi|408018287|gb|EKG55742.1| porphobilinogen deaminase [Vibrio cholerae HC-41A1]
gi|408037820|gb|EKG74194.1| porphobilinogen deaminase [Vibrio cholerae CP1037(10)]
gi|408038714|gb|EKG75042.1| porphobilinogen deaminase [Vibrio cholerae CP1040(13)]
gi|408045837|gb|EKG81605.1| porphobilinogen deaminase [Vibrio Cholerae CP1044(17)]
gi|408047707|gb|EKG83273.1| porphobilinogen deaminase [Vibrio cholerae CP1050(23)]
gi|408058257|gb|EKG93071.1| porphobilinogen deaminase [Vibrio cholerae HC-81A2]
gi|408612564|gb|EKK85899.1| porphobilinogen deaminase [Vibrio cholerae CP1033(6)]
gi|408628559|gb|EKL01295.1| porphobilinogen deaminase [Vibrio cholerae HC-17A1]
gi|408645057|gb|EKL16724.1| porphobilinogen deaminase [Vibrio cholerae HC-50A2]
gi|408660385|gb|EKL31403.1| porphobilinogen deaminase [Vibrio cholerae HC-77A1]
gi|408661207|gb|EKL32199.1| porphobilinogen deaminase [Vibrio cholerae HC-62A1]
gi|408850178|gb|EKL90154.1| porphobilinogen deaminase [Vibrio cholerae HC-37A1]
gi|408850510|gb|EKL90465.1| porphobilinogen deaminase [Vibrio cholerae HC-17A2]
gi|408876371|gb|EKM15499.1| porphobilinogen deaminase [Vibrio cholerae HC-62B1]
gi|408882379|gb|EKM21212.1| porphobilinogen deaminase [Vibrio cholerae HC-69A1]
gi|439972384|gb|ELP48670.1| porphobilinogen deaminase [Vibrio cholerae 4260B]
gi|443433479|gb|ELS75985.1| porphobilinogen deaminase [Vibrio cholerae HC-64A1]
gi|443437317|gb|ELS83413.1| porphobilinogen deaminase [Vibrio cholerae HC-65A1]
gi|443441150|gb|ELS90817.1| porphobilinogen deaminase [Vibrio cholerae HC-67A1]
gi|443444963|gb|ELS98219.1| porphobilinogen deaminase [Vibrio cholerae HC-68A1]
gi|443448824|gb|ELT05437.1| porphobilinogen deaminase [Vibrio cholerae HC-71A1]
gi|443451861|gb|ELT12103.1| porphobilinogen deaminase [Vibrio cholerae HC-72A2]
gi|443460166|gb|ELT27555.1| porphobilinogen deaminase [Vibrio cholerae HC-7A1]
gi|443463039|gb|ELT34054.1| porphobilinogen deaminase [Vibrio cholerae HC-80A1]
gi|443467886|gb|ELT42540.1| porphobilinogen deaminase [Vibrio cholerae HC-81A1]
gi|448265935|gb|EMB03168.1| Porphobilinogen deaminase [Vibrio cholerae O1 str. Inaba G4222]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|419827820|ref|ZP_14351313.1| porphobilinogen deaminase [Vibrio cholerae HC-1A2]
gi|419831481|ref|ZP_14354951.1| porphobilinogen deaminase [Vibrio cholerae HC-61A2]
gi|419835057|ref|ZP_14358506.1| porphobilinogen deaminase [Vibrio cholerae HC-46B1]
gi|421341696|ref|ZP_15792106.1| porphobilinogen deaminase [Vibrio cholerae HC-43B1]
gi|421352886|ref|ZP_15803225.1| porphobilinogen deaminase [Vibrio cholerae HE-45]
gi|422305534|ref|ZP_16392735.1| porphobilinogen deaminase [Vibrio cholerae CP1035(8)]
gi|422915852|ref|ZP_16950209.1| porphobilinogen deaminase [Vibrio cholerae HC-02A1]
gi|423733403|ref|ZP_17706637.1| porphobilinogen deaminase [Vibrio cholerae HC-41B1]
gi|423810759|ref|ZP_17714801.1| porphobilinogen deaminase [Vibrio cholerae HC-55C2]
gi|423845619|ref|ZP_17718575.1| porphobilinogen deaminase [Vibrio cholerae HC-59A1]
gi|423877831|ref|ZP_17722204.1| porphobilinogen deaminase [Vibrio cholerae HC-60A1]
gi|423996023|ref|ZP_17739543.1| porphobilinogen deaminase [Vibrio cholerae HC-02C1]
gi|424007700|ref|ZP_17750659.1| porphobilinogen deaminase [Vibrio cholerae HC-44C1]
gi|424014936|ref|ZP_17754827.1| porphobilinogen deaminase [Vibrio cholerae HC-55B2]
gi|424018079|ref|ZP_17757892.1| porphobilinogen deaminase [Vibrio cholerae HC-59B1]
gi|424623458|ref|ZP_18061946.1| porphobilinogen deaminase [Vibrio cholerae HC-50A1]
gi|424628029|ref|ZP_18066352.1| porphobilinogen deaminase [Vibrio cholerae HC-51A1]
gi|424631978|ref|ZP_18070110.1| porphobilinogen deaminase [Vibrio cholerae HC-52A1]
gi|424635064|ref|ZP_18073098.1| porphobilinogen deaminase [Vibrio cholerae HC-55A1]
gi|424638890|ref|ZP_18076798.1| porphobilinogen deaminase [Vibrio cholerae HC-56A1]
gi|424647142|ref|ZP_18084833.1| porphobilinogen deaminase [Vibrio cholerae HC-57A1]
gi|443526016|ref|ZP_21092119.1| porphobilinogen deaminase [Vibrio cholerae HC-78A1]
gi|341641872|gb|EGS66389.1| porphobilinogen deaminase [Vibrio cholerae HC-02A1]
gi|395947280|gb|EJH57936.1| porphobilinogen deaminase [Vibrio cholerae HC-43B1]
gi|395956682|gb|EJH67275.1| porphobilinogen deaminase [Vibrio cholerae HE-45]
gi|408017458|gb|EKG54961.1| porphobilinogen deaminase [Vibrio cholerae HC-50A1]
gi|408023048|gb|EKG60229.1| porphobilinogen deaminase [Vibrio cholerae HC-52A1]
gi|408028251|gb|EKG65156.1| porphobilinogen deaminase [Vibrio cholerae HC-56A1]
gi|408028635|gb|EKG65510.1| porphobilinogen deaminase [Vibrio cholerae HC-55A1]
gi|408038554|gb|EKG74891.1| porphobilinogen deaminase [Vibrio cholerae HC-57A1]
gi|408059985|gb|EKG94712.1| porphobilinogen deaminase [Vibrio cholerae HC-51A1]
gi|408624571|gb|EKK97515.1| porphobilinogen deaminase [Vibrio cholerae HC-1A2]
gi|408628632|gb|EKL01363.1| porphobilinogen deaminase [Vibrio cholerae CP1035(8)]
gi|408632508|gb|EKL04959.1| porphobilinogen deaminase [Vibrio cholerae HC-41B1]
gi|408637392|gb|EKL09454.1| porphobilinogen deaminase [Vibrio cholerae HC-55C2]
gi|408645141|gb|EKL16807.1| porphobilinogen deaminase [Vibrio cholerae HC-60A1]
gi|408646327|gb|EKL17941.1| porphobilinogen deaminase [Vibrio cholerae HC-59A1]
gi|408652630|gb|EKL23840.1| porphobilinogen deaminase [Vibrio cholerae HC-61A2]
gi|408855529|gb|EKL95230.1| porphobilinogen deaminase [Vibrio cholerae HC-02C1]
gi|408859499|gb|EKL99157.1| porphobilinogen deaminase [Vibrio cholerae HC-46B1]
gi|408862806|gb|EKM02307.1| porphobilinogen deaminase [Vibrio cholerae HC-55B2]
gi|408868127|gb|EKM07472.1| porphobilinogen deaminase [Vibrio cholerae HC-44C1]
gi|408871463|gb|EKM10703.1| porphobilinogen deaminase [Vibrio cholerae HC-59B1]
gi|443455651|gb|ELT19415.1| porphobilinogen deaminase [Vibrio cholerae HC-78A1]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|297581838|ref|ZP_06943759.1| porphobilinogen deaminase [Vibrio cholerae RC385]
gi|297533932|gb|EFH72772.1| porphobilinogen deaminase [Vibrio cholerae RC385]
Length = 317
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 73 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 133 TCSLRRQCQLKAARSDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 193 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 248
>gi|15640152|ref|NP_229779.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587718|ref|ZP_01677479.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121728303|ref|ZP_01681334.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|147675270|ref|YP_001218298.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|153818935|ref|ZP_01971602.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|153822325|ref|ZP_01974992.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|227080356|ref|YP_002808907.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|227116428|ref|YP_002818324.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|229508398|ref|ZP_04397902.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229508921|ref|ZP_04398411.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229517035|ref|ZP_04406481.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229606671|ref|YP_002877319.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254851504|ref|ZP_05240854.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|298501111|ref|ZP_07010911.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
gi|9654520|gb|AAF93298.1| porphobilinogen deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121548017|gb|EAX58095.1| porphobilinogen deaminase [Vibrio cholerae 2740-80]
gi|121629433|gb|EAX61862.1| porphobilinogen deaminase [Vibrio cholerae V52]
gi|126510497|gb|EAZ73091.1| porphobilinogen deaminase [Vibrio cholerae NCTC 8457]
gi|126520151|gb|EAZ77374.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|146317153|gb|ABQ21692.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|227008244|gb|ACP04456.1| porphobilinogen deaminase [Vibrio cholerae M66-2]
gi|227011878|gb|ACP08088.1| porphobilinogen deaminase [Vibrio cholerae O395]
gi|229346098|gb|EEO11070.1| porphobilinogen deaminase [Vibrio cholerae RC9]
gi|229354038|gb|EEO18971.1| porphobilinogen deaminase [Vibrio cholerae B33]
gi|229354671|gb|EEO19593.1| porphobilinogen deaminase [Vibrio cholerae BX 330286]
gi|229369326|gb|ACQ59749.1| porphobilinogen deaminase [Vibrio cholerae MJ-1236]
gi|254847209|gb|EET25623.1| porphobilinogen deaminase [Vibrio cholerae MO10]
gi|297540145|gb|EFH76206.1| porphobilinogen deaminase [Vibrio cholerae MAK 757]
Length = 317
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 73 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 133 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 193 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 248
>gi|386826885|ref|ZP_10113992.1| porphobilinogen deaminase [Beggiatoa alba B18LD]
gi|386427769|gb|EIJ41597.1| porphobilinogen deaminase [Beggiatoa alba B18LD]
Length = 307
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ +DIAVHSMKDVP D LP ++RE
Sbjct: 65 EQGLLENSVDIAVHSMKDVPIEFPDGLHLPVIMRREDPFDAFVSNTYAHFSDLPQGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G QA + A++GLK L + +
Sbjct: 125 TSSLRRQCQLLALRPDLQIRTLRGNVGTRLSKLDNGEYQAIVLAVSGLKRLGLENRIRYA 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D++L A+ QGA+GI C ++D + + + LN ET Q V+ ER L GSC
Sbjct: 185 FNADELLPAIGQGALGIECRADDVETNQLIAVLNDPETHQRVIAERMINTRLGGSC 240
>gi|229525016|ref|ZP_04414421.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
gi|229338597|gb|EEO03614.1| porphobilinogen deaminase [Vibrio cholerae bv. albensis VL426]
Length = 317
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 73 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 133 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 193 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 248
>gi|422908662|ref|ZP_16943341.1| porphobilinogen deaminase [Vibrio cholerae HE-09]
gi|341639325|gb|EGS63945.1| porphobilinogen deaminase [Vibrio cholerae HE-09]
Length = 311
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|424600348|ref|ZP_18039518.1| porphobilinogen deaminase [Vibrio cholerae CP1047(20)]
gi|395980128|gb|EJH89428.1| porphobilinogen deaminase [Vibrio cholerae CP1047(20)]
Length = 295
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 51 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 110
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 111 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 170
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 171 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 226
>gi|300866645|ref|ZP_07111332.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
gi|300335354|emb|CBN56492.1| porphobilinogen deaminase [Oscillatoria sp. PCC 6506]
Length = 323
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +++ E D AVHS+KD+PT L + IL C +RE
Sbjct: 73 EVGMLSNETDFAVHSLKDLPTNLPEGLILGCVSERENPADALVVHANHQDKQLETLPPGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+EG A + A+AGL+ L M + V
Sbjct: 133 VIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLAKLDEGEYDAIILAVAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+ + L AV QGA+GI C + D + + + +L H ET Q ERAFL L+G C
Sbjct: 193 HQIISPEISLHAVGQGALGIECRAGDDDILELIKALEHTETAQRCYAERAFLRELEGGC 251
>gi|222111550|ref|YP_002553814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
gi|221730994|gb|ACM33814.1| porphobilinogen deaminase [Acidovorax ebreus TPSY]
Length = 310
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G DIAVHS+KDVP L L C ++RE
Sbjct: 70 EVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGAVVG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + E + +
Sbjct: 130 TSSLRRQVLLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRAV 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ML A QGA+GI + + + L L HE T V ERA + GSC
Sbjct: 190 FTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSC 245
>gi|90414241|ref|ZP_01222221.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
gi|90324688|gb|EAS41229.1| porphobilinogen deaminase [Photobacterium profundum 3TCK]
Length = 341
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 98 EVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNTYNSIAELPAGSIVG 157
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ + GNV RLRKL+EG A + A AGL L M + + +
Sbjct: 158 TSSLRRQCQLRAQRPDLIINDLRGNVNTRLRKLDEGQYDAIILACAGLMRLEMHDRIRSA 217
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGA+GI C +D ++ L +LNH ET + CERA L G C
Sbjct: 218 IEPEESLPAVGQGAVGIECRLDDHRVRALLATLNHPETATRIFCERAMNNHLQGGC 273
>gi|121595211|ref|YP_987107.1| porphobilinogen deaminase [Acidovorax sp. JS42]
gi|120607291|gb|ABM43031.1| porphobilinogen deaminase [Acidovorax sp. JS42]
Length = 320
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G DIAVHS+KDVP L L C ++RE
Sbjct: 80 EVALEEGRADIAVHSLKDVPMELPQGFALACVMEREDPRDAFVSPGYASLDELPHGAVVG 139
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + E + +
Sbjct: 140 TSSLRRQALLQALRPDLQIEPLRGNVQTRLRKLDEGQYAAIVLAAAGLKRLGLHERIRAV 199
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ML A QGA+GI + + + L L HE T V ERA + GSC
Sbjct: 200 FTPEQMLPAAGQGALGIEIRGDRHDLREALAPLAHERTWLTVTAERAVSRAMGGSC 255
>gi|406037508|ref|ZP_11044872.1| porphobilinogen deaminase [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 305
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + L +RE
Sbjct: 65 EAALLDGRADLAVHSMKDVPMHLPEGLTLAVTCEREDPLDAFVSNHYQSFDELPQGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L + + + +
Sbjct: 125 TSSLRRKCQILQIRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLADRIRHC 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C ++D+ + K + L HEET V ERAF L+G C
Sbjct: 185 LAPVLSLPAVGQGALGLECRADDEALLKIIQPLQHEETSICVRAERAFNAYLEGGC 240
>gi|330813348|ref|YP_004357587.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
gi|327486443|gb|AEA80848.1| porphobilinogen deaminase [Candidatus Pelagibacter sp. IMCC9063]
Length = 321
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ ID AVHS+KDVPT+ + L L+R+
Sbjct: 71 EQELLENNIDCAVHSLKDVPTFGVPSLKLAAFLKRKDERDAFISPVAKSFETLKPGSTVG 130
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+ K+ EG+ + + A AGLK L +V+ I
Sbjct: 131 TSSVRRIAQLKKLRSDLNIVSMRGNIDTRIEKVKEGIYDSIVLAYAGLKRLGFHTHVSEI 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + ML A QG + I C SND ++ K L S+N +ET V ER+FL ++G+C
Sbjct: 191 LDKEKMLPAAGQGVVTIQCRSNDGELIKLLKSVNDKETEIIVSAERSFLHRVNGAC 246
>gi|239827917|ref|YP_002950541.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
gi|259647799|sp|C5D5K7.1|HEM3_GEOSW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|239808210|gb|ACS25275.1| porphobilinogen deaminase [Geobacillus sp. WCH70]
Length = 311
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++NGEID+AVHSMKD+P L D I+ C RE
Sbjct: 65 EHAMLNGEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHHDVLISKNKETFANLPSGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL KL A + A AGL + +V T
Sbjct: 125 TSSLRRSAQILAKRPDLKIKWIRGNIDTRLAKLQNEDYDAIILAAAGLVRMGWARDVITE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ + C ND+++ ++L LN T +AV+ ER FL ++G C
Sbjct: 185 YLSTDVCLPAVGQGALAVECRENDEELREWLQKLNDVHTERAVLAERVFLQQMEGGC 241
>gi|331005642|ref|ZP_08329011.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
gi|330420567|gb|EGG94864.1| Porphobilinogen deaminase [gamma proteobacterium IMCC1989]
Length = 324
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+NGE DIAVHSMKDVP + L +RE
Sbjct: 77 EHALLNGEADIAVHSMKDVPMEFPEGLGLSVICEREDPRDAFVSEKYASFADLPQGAVVG 136
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AGL L M + +T
Sbjct: 137 TSSLRRQCQLLEQRPDLQITFLRGNVNTRLRKLDEGEYDAIILAAAGLMRLKMADRITEY 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A QGA+GI C +D+++ +L LN T + V ERA L+G C
Sbjct: 197 LTPELCLPAGGQGAVGIECRDDDEQVKTWLAPLNDPITHECVAAERAMNRRLEGGC 252
>gi|68171155|ref|ZP_00544563.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88657743|ref|YP_507506.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
gi|123722778|sp|Q2GGC7.1|HEM3_EHRCR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|67999425|gb|EAM86066.1| Porphobilinogen deaminase [Ehrlichia chaffeensis str. Sapulpa]
gi|88599200|gb|ABD44669.1| porphobilinogen deaminase [Ehrlichia chaffeensis str. Arkansas]
Length = 298
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
EEAL+ G++D+AVHS+KD+P + + I+PC L+R
Sbjct: 64 EEALLMGKVDLAVHSVKDIPAFYCEGLIIPCVLKRNSPYDVFISSKHKDIKSLPLNATIG 123
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+ K N G + A AGL +N + + I
Sbjct: 124 TSSVRRKVQLNYLRPDLQVVPVRGNIDTRILKANVGEFDGIVLAEAGLIRINRCDVIKEI 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ML AV QGAIGI C +D + + LN ++ V+ ER+FL T++GSC
Sbjct: 184 LSPKIMLSAVGQGAIGIQCRVDDHSIINKIKVLNCHQSYVCVMAERSFLKTINGSC 239
>gi|113868875|ref|YP_727364.1| porphobilinogen deaminase [Ralstonia eutropha H16]
gi|113527651|emb|CAJ93996.1| porphobilinogen deaminase [Ralstonia eutropha H16]
Length = 337
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ G D+AVHS+KDVP L + L ++RE
Sbjct: 82 EFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPAGTVVG 141
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL KL+ G A + A AGLK L + E + +
Sbjct: 142 TSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGERIRAL 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+PID L A QGA+GI +N ++A++L LNH+ T AV ERA L GSC
Sbjct: 202 IPIDVSLPAAGQGALGIEILANRPELAQWLAPLNHQPTALAVSAERAVSRMLGGSC 257
>gi|421530730|ref|ZP_15977195.1| porphobilinogen deaminase [Pseudomonas putida S11]
gi|402211848|gb|EJT83280.1| porphobilinogen deaminase [Pseudomonas putida S11]
Length = 313
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D+++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADREIHALLAPLHHADTADRVVAERALNKRLNGGC 242
>gi|378953585|ref|YP_005211073.1| HemC protein [Pseudomonas fluorescens F113]
gi|359763599|gb|AEV65678.1| HemC [Pseudomonas fluorescens F113]
Length = 313
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEALPAGSVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEERITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+HE+T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHLNGGC 242
>gi|359428433|ref|ZP_09219468.1| porphobilinogen deaminase [Acinetobacter sp. NBRC 100985]
gi|358236218|dbj|GAB01007.1| porphobilinogen deaminase [Acinetobacter sp. NBRC 100985]
Length = 305
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + L +RE
Sbjct: 65 EAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNQYQHFDELPQGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L + + + +
Sbjct: 125 TSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLEDRIRHC 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C +ND ++ K + L HEET V ERAF L+G C
Sbjct: 185 LAPVVSLPAVGQGALGLECRTNDDELLKLIQPLQHEETSICVRAERAFNAYLEGGC 240
>gi|440684689|ref|YP_007159484.1| hydroxymethylbilane synthase [Anabaena cylindrica PCC 7122]
gi|428681808|gb|AFZ60574.1| hydroxymethylbilane synthase [Anabaena cylindrica PCC 7122]
Length = 322
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 72 ELGMINQEIDFAVHSLKDLPTKLPEGLTLAAITERENPADALVLHEKYKGQTIDTLPEGA 131
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ R+ KL++G A + A+AGL+ L M++ +
Sbjct: 132 VIGTSSLRRLAQLRNKFPHFTFKDVRGNLITRMEKLDKGDYDALILAVAGLERLGMSDRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C ++D ++ L ++ +TR + ERAFL +L+G C
Sbjct: 192 HQVLPPEISLHAVGQGALGIECRADDSEVISILKAIEDPQTRDRCLAERAFLRSLEGGC 250
>gi|255534181|ref|YP_003094552.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
gi|255340377|gb|ACU06490.1| Porphobilinogen deaminase [Flavobacteriaceae bacterium 3519-10]
Length = 311
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+N E+DIAVHS+KD+PT L + + LQR+
Sbjct: 73 ALLNNEVDIAVHSLKDIPTQLPENVEIIAVLQRDYPQDVLVRKKDAATLELHQLKIATSS 132
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RL KL E AT+ +LA ++ + ++ + + LP+
Sbjct: 133 LRRRAFWLKEFPGTEFSDIRGNVQTRLTKLEENDFDATMFSLAAIERMGLSVDYEH-LPL 191
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A AQG + + SND ++ + +NH ETR + ER+FL TL+G C
Sbjct: 192 --MIPAPAQGVVAVCARSNDPEIKELFKEINHRETRICIDIERSFLSTLEGGC 242
>gi|342214894|ref|ZP_08707565.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590425|gb|EGS33668.1| hydroxymethylbilane synthase [Veillonella sp. oral taxon 780 str.
F0422]
Length = 312
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL--------PCN-------------------- 33
E ++ +G ID+AVHS+KD+PT L + +L PC+
Sbjct: 66 EASMRDGSIDLAVHSLKDMPTELPEDLVLGAITERETPCDALVSPKYKTLDQLPQGAKVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GNVQ RL KL A + A AGLK L + VT
Sbjct: 126 TSSLRRQAQLLNQRPDLQISVLRGNVQTRLNKLETENFDAIVLAEAGLKRLGLESVVTQT 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ AV QGA+GI C +D +M L L+ E T A ER+FL L+G C
Sbjct: 186 FTSDEMIPAVGQGALGIECRKDDTEMLDMLSVLHDENTMWATRGERSFLRQLEGGC 241
>gi|339326971|ref|YP_004686664.1| porphobilinogen deaminase [Cupriavidus necator N-1]
gi|338167128|gb|AEI78183.1| porphobilinogen deaminase HemC [Cupriavidus necator N-1]
Length = 337
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ G D+AVHS+KDVP L + L ++RE
Sbjct: 82 EFAMDEGRADLAVHSLKDVPMELPEGFALTAVMEREDPRDALVSSAYASLDEMPAGTVVG 141
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL KL+ G A + A AGLK L + E + +
Sbjct: 142 TSSLRREAALRSRYPQLVIKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGERIRAL 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+PI+ L A QGA+GI +N ++A++L +LNH+ T AV ERA L GSC
Sbjct: 202 IPIEVSLPAAGQGALGIEIPANRPELAQWLATLNHQPTALAVTAERAVSRMLGGSC 257
>gi|46580299|ref|YP_011107.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153274|ref|YP_005702210.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1]
gi|55976453|sp|Q72AV0.1|HEM3_DESVH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|46449716|gb|AAS96366.1| porphobilinogen deaminase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233718|gb|ADP86572.1| porphobilinogen deaminase [Desulfovibrio vulgaris RCH1]
Length = 315
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHSMKDVP L + L C +RE
Sbjct: 66 EEALLDGSADLAVHSMKDVPMELPEGLFLGCIPEREEPSDTLLSVRYASLDALPHGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL +G A + A AGLK L + +
Sbjct: 126 TSSLRRQSQLLALRPDLDIISLRGNVDTRLRKLMDGEFDAIVMATAGLKRLGLAAPHHEV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI + + L L+H TR V ER FL L+G C
Sbjct: 186 LAPPRFLPAVGQGALGIEFREDRADLRDMLAFLDHRPTRIRVEAERGFLAGLEGGC 241
>gi|381207782|ref|ZP_09914853.1| porphobilinogen deaminase, partial [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 279
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDK-----TIL 30
E+AL++ D+AVHSMKD+ T L L+K I
Sbjct: 38 EQALMDHRADLAVHSMKDLTTELPPSLELSVITERDDPNDALVSNQYPSLNKLPDGAVIG 97
Query: 31 PCNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RLRKL++G A + A+AGLK L + E + +
Sbjct: 98 TSSLRRMSQLRHFFPNLKIKNLRGNLDTRLRKLDDGEYDAIILAVAGLKRLGLQERIAQV 157
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ML A+AQG IGI S D+ +++ L H +T + ++CER L L G+C
Sbjct: 158 IPHSVMLPAIAQGVIGIETRSGDQDTLQWIQQLRHTKTERELICERTVLSGLSGNC 213
>gi|209965647|ref|YP_002298562.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
gi|209959113|gb|ACI99749.1| porphobilinogen deaminase [Rhodospirillum centenum SW]
Length = 323
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL ID+AVHSMKDVPT+ L L RE
Sbjct: 70 EEALQAETIDLAVHSMKDVPTWRQTGLQLTAMLPREDPRDAWFCRHGCGLDELPAGAVVG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R+ KL EG + ATL ALAGL+ L + E++T
Sbjct: 130 TASLRRQAQILARRPDLKVVPFRGNVQTRMTKLAEGQVDATLLALAGLRRLGLVEHMTAA 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ML AVAQGAIGI + D + +LNH ET V ER L TLDGSC
Sbjct: 190 IETDVMLPAVAQGAIGIETRAADDVTNALVAALNHAETMTRVTAERGVLATLDGSC 245
>gi|402815470|ref|ZP_10865062.1| porphobilinogen deaminase HemC [Paenibacillus alvei DSM 29]
gi|402506510|gb|EJW17033.1| porphobilinogen deaminase HemC [Paenibacillus alvei DSM 29]
Length = 256
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+ALI+ E+DIAVHSMKD+P L D LP
Sbjct: 15 EQALIDKEVDIAVHSMKDMPWELQDGLTVGAVPKREDPRDCLIMKSGTSIEDLPIGAKVG 74
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C LQ + GN+ RL+KL+ A + A AGL + + +T+
Sbjct: 75 TSSLRRACQLQAQRPDLQIEPLRGNIDTRLKKLDTEGFDAIVLAAAGLHRMGWQDRITSY 134
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP L AV QGA+GI C ++D+++ L + +T V ERAFLG L+G C
Sbjct: 135 LPTAVSLPAVGQGALGIECRADDEEVLALLARYHDADTALTVQAERAFLGRLNGGC 190
>gi|254977043|ref|ZP_05273515.1| porphobilinogen deaminase [Clostridium difficile QCD-66c26]
gi|255094370|ref|ZP_05323848.1| porphobilinogen deaminase [Clostridium difficile CIP 107932]
gi|255316123|ref|ZP_05357706.1| porphobilinogen deaminase [Clostridium difficile QCD-76w55]
gi|255518784|ref|ZP_05386460.1| porphobilinogen deaminase [Clostridium difficile QCD-97b34]
gi|255651962|ref|ZP_05398864.1| porphobilinogen deaminase [Clostridium difficile QCD-37x79]
gi|260684926|ref|YP_003216211.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260688584|ref|YP_003219718.1| porphobilinogen deaminase [Clostridium difficile R20291]
gi|306521710|ref|ZP_07408057.1| porphobilinogen deaminase [Clostridium difficile QCD-32g58]
gi|384362595|ref|YP_006200447.1| porphobilinogen deaminase [Clostridium difficile BI1]
gi|260211089|emb|CBA66474.1| porphobilinogen deaminase [Clostridium difficile CD196]
gi|260214601|emb|CBE07178.1| porphobilinogen deaminase [Clostridium difficile R20291]
Length = 301
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G+IDIAVHSMKD+P+YL D +RE
Sbjct: 64 EQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAVI 123
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV+ R+RK+ + + + A +G+ N+ + +++
Sbjct: 124 GTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKISS 183
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D ++ A AQGA+ I SND + + SL E T ++ ER FL ++GSC
Sbjct: 184 YLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
>gi|423090518|ref|ZP_17078807.1| hydroxymethylbilane synthase [Clostridium difficile 70-100-2010]
gi|357556222|gb|EHJ37837.1| hydroxymethylbilane synthase [Clostridium difficile 70-100-2010]
Length = 301
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G+IDIAVHSMKD+P+YL D +RE
Sbjct: 64 EQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAVI 123
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV+ R+RK+ + + + A +G+ N+ + +++
Sbjct: 124 GTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKISS 183
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D ++ A AQGA+ I SND + + SL E T ++ ER FL ++GSC
Sbjct: 184 YLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
>gi|262404857|ref|ZP_06081411.1| porphobilinogen deaminase [Vibrio sp. RC586]
gi|262348941|gb|EEY98080.1| porphobilinogen deaminase [Vibrio sp. RC586]
Length = 311
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 82/178 (46%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYL-LDKTILP---- 31
E A++ G D+AVHSMKDVP TY+ +D LP
Sbjct: 67 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYVKIDD--LPSGAV 124
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
C+L+R+ GNV RL KL+ G A + A AGLK L + +
Sbjct: 125 VGTCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
N + + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 185 NFIEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 242
>gi|261210172|ref|ZP_05924469.1| porphobilinogen deaminase [Vibrio sp. RC341]
gi|260840712|gb|EEX67261.1| porphobilinogen deaminase [Vibrio sp. RC341]
Length = 311
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 67 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + N
Sbjct: 127 TCSLRRQCQLKSARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLGLESRIRNF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 242
>gi|375309922|ref|ZP_09775200.1| Porphobilinogen deaminase [Paenibacillus sp. Aloe-11]
gi|375077875|gb|EHS56105.1| Porphobilinogen deaminase [Paenibacillus sp. Aloe-11]
Length = 308
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A++ GEID+AVHSMKD+P+ L + + LP
Sbjct: 69 EQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDLPQGAKVG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +RL+KL A + A AGL + E +T+
Sbjct: 129 TSSLRRASQIKAMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKERITSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ++D+++ L N +T V ER FLG L+G C
Sbjct: 189 IPEEACLPAVGQGALGIECRADDEELLSLLRLYNDRDTSATVAAERTFLGVLNGGC 244
>gi|339485101|ref|YP_004699629.1| porphobilinogen deaminase [Pseudomonas putida S16]
gi|338835944|gb|AEJ10749.1| porphobilinogen deaminase [Pseudomonas putida S16]
Length = 313
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFASLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D+++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADQQIHALLAPLHHADTADRVVAERALNKRLNGGC 242
>gi|317129820|ref|YP_004096102.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
gi|315474768|gb|ADU31371.1| porphobilinogen deaminase [Bacillus cellulosilyticus DSM 2522]
Length = 310
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD--------KTILP---------------------- 31
E+A+ +GEIDIAVHSMKD+P + D K + P
Sbjct: 65 EKAMYDGEIDIAVHSMKDLPAEIADGMAVGAIPKRVDPRDAFISNSGKGLMDLPAGSIVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
+L+R GN+ RLRK E A + A AG++ + T + VT
Sbjct: 125 TSSLRRSAQVLAKRPDLEIQWIRGNIDTRLRKCREENFDAIILAAAGIERVGWTSDIVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C ++DK++ L +N +T + V ERAFL T++G C
Sbjct: 185 FLEPEVCLPAVGQGALGIECRADDKEVLALLAKINDSDTEKTVTAERAFLHTVEGGC 241
>gi|255102624|ref|ZP_05331601.1| porphobilinogen deaminase [Clostridium difficile QCD-63q42]
gi|255308450|ref|ZP_05352621.1| porphobilinogen deaminase [Clostridium difficile ATCC 43255]
gi|423080745|ref|ZP_17069362.1| hydroxymethylbilane synthase [Clostridium difficile 002-P50-2011]
gi|423087146|ref|ZP_17075535.1| hydroxymethylbilane synthase [Clostridium difficile 050-P50-2011]
gi|357545084|gb|EHJ27064.1| hydroxymethylbilane synthase [Clostridium difficile 050-P50-2011]
gi|357552234|gb|EHJ34008.1| hydroxymethylbilane synthase [Clostridium difficile 002-P50-2011]
Length = 301
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G+IDIAVHSMKD+P+YL D +RE
Sbjct: 64 EQQLLDGKIDIAVHSMKDMPSYLADGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAVI 123
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV+ R+RK+ + + + A +G+ N+ + +++
Sbjct: 124 GTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKISS 183
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D ++ A AQGA+ I SND + + SL E T ++ ER FL ++GSC
Sbjct: 184 YLPVDVVIPAPAQGALAIEIRSNDSTIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
>gi|92115224|ref|YP_575152.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
gi|91798314|gb|ABE60453.1| hydroxymethylbilane synthase [Chromohalobacter salexigens DSM 3043]
Length = 311
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK------------------------TILP------ 31
EEAL++G DIAVHSMKDVP + + LP
Sbjct: 65 EEALLDGRADIAVHSMKDVPMHFPEGLGLSVILESGAPTDAFVSNDYASLDALPEGVRVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL KL+ G +A + A +GL+ L + +T
Sbjct: 125 TSSLRRGLQVKEARPDLEVLNLRGNVQTRLGKLDGGEFEAIILATSGLQRLELGHRITQE 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L A QGA+GI C +D+ + + L L+H +T V ERA LDG C
Sbjct: 185 LPPEVSLPACGQGALGIECRHDDESLLELLAPLDHPQTATRVRAERAMNTRLDGGC 240
>gi|149191476|ref|ZP_01869725.1| porphobilinogen deaminase [Vibrio shilonii AK1]
gi|148834664|gb|EDL51652.1| porphobilinogen deaminase [Vibrio shilonii AK1]
Length = 329
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 83/177 (46%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYLLDKTILP----- 31
E A++ G D+AVHSMKDVP TY + + LP
Sbjct: 85 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYT-NISELPQGAVV 143
Query: 32 --CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 144 GTCSLRRQCQLKEQRPDLVIKELRGNVGTRLGKLDNGEYDAIILAAAGLKRLELESRIRS 203
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L AV QGA+GI C +D+++ K L LNH T V+CERA TL+G C
Sbjct: 204 FIEPEESLPAVGQGAVGIECRLDDERLIKLLEPLNHTNTADRVLCERAMNLTLEGGC 260
>gi|11386777|sp|O69110.1|HEM3_PAEMA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|3172405|gb|AAC18587.1| porphobilinogen deaminase [Paenibacillus macerans]
Length = 324
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A+++GEID+AVHSMKD+P+ L + I LP
Sbjct: 71 EQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLHLHELPQGARVG 130
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R GN+ +RLRKL E A + A AGL+ + VT
Sbjct: 131 TSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGLQRMGWENRVTAY 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+GI C ND ++ L N +T V ER FL L+G C
Sbjct: 191 LSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRFLAVLNGGC 246
>gi|162449896|ref|YP_001612263.1| hydroxymethylbilane synthase [Sorangium cellulosum So ce56]
gi|189028159|sp|A9FDP9.1|HEM3_SORC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|161160478|emb|CAN91783.1| Hydroxymethylbilane synthase [Sorangium cellulosum So ce56]
Length = 300
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ D AVHS+KDVP + L C RE
Sbjct: 66 EEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRK+ +GV A + ALAGLK L + T +
Sbjct: 126 TSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARATEV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A+ QGA+GI C + D + LG+L ET V ERA + ++GSC
Sbjct: 186 LSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSC 241
>gi|336452168|ref|ZP_08622600.1| porphobilinogen deaminase [Idiomarina sp. A28L]
gi|336280984|gb|EGN74269.1| porphobilinogen deaminase [Idiomarina sp. A28L]
Length = 313
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ G DIAVHSMKDVP + L QRE
Sbjct: 68 EVAMLEGRADIAVHSMKDVPVGFPEGLELATFCQREDPRDAFVSNDYESLAAMPAGSVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL++G A + A +GLK L + E +T
Sbjct: 128 TCSLRRRCQVAEQYPQLIIKDLRGNVQTRLRKLDDGEFDAIILAASGLKRLELHERITAC 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A QGA+GI C S+D+++ L L ETR V ERA L+G C
Sbjct: 188 LDPETSLPANGQGALGIECRSDDERVKALLAPLEDAETRACVSAERAMNRRLEGGC 243
>gi|330444901|ref|ZP_08308556.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489211|dbj|GAA03053.1| porphobilinogen deaminase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 310
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 67 EVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDELPQGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RLRKL++G A + A AGLK L M + + +
Sbjct: 127 TSSLRRQCQIRAQRPDLIVNDLRGNVNTRLRKLDDGEYDAIILACAGLKRLKMDDRIRSE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D ++ + L +LNH+ T V+CERA L G C
Sbjct: 187 IAPETSLPAVGQGAVGIECRLDDTRVRQLLDALNHQPTATRVLCERAMNNRLQGGC 242
>gi|347731392|ref|ZP_08864488.1| porphobilinogen deaminase [Desulfovibrio sp. A2]
gi|347519711|gb|EGY26860.1| porphobilinogen deaminase [Desulfovibrio sp. A2]
Length = 317
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHSMKDVP L + +L +RE
Sbjct: 65 EEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHASLAALPHGATVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AG+K L ++ + +
Sbjct: 125 TSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLSAPKSEV 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI ++ + L L H TR V ER FL L G C
Sbjct: 185 LGPPAFLPAVGQGALGIEFRADRADLHDLLAFLEHTPTRIRVEAERGFLAGLQGGC 240
>gi|218885688|ref|YP_002435009.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226740632|sp|B8DKW2.1|HEM3_DESVM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218756642|gb|ACL07541.1| porphobilinogen deaminase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 317
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHSMKDVP L + +L +RE
Sbjct: 65 EEALLDGRADLAVHSMKDVPMELPEGLVLGIIPEREEPSDTFLSVHHDSLAALPHGATVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+EG A + A AG+K L ++ + +
Sbjct: 125 TSSLRRQSQLLALRPDLNVVSLRGNVDTRLRKLSEGQFDAIIMATAGMKRLGLSAPRSEV 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+GI ++ + + L + H TR V ER FL L G C
Sbjct: 185 LGPPAFLPAVGQGALGIEFRADRADLHELLAFMEHTPTRIRVEAERGFLAGLQGGC 240
>gi|390455667|ref|ZP_10241195.1| phosphate ABC transporter ATPase [Paenibacillus peoriae KCTC 3763]
Length = 308
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A++ GEID+AVHSMKD+P+ L + + LP
Sbjct: 69 EQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLITLGAKSLEDLPQGAKVG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +RL+KL A + A AGL + E +T+
Sbjct: 129 TSSLRRASQIKAMRPDLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKERITSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ++D+++ L N +T V ER FLG L+G C
Sbjct: 189 IPEEACLPAVGQGALGIECRADDEELLTLLRLYNDRDTSATVAAERTFLGVLNGGC 244
>gi|452975364|gb|EME75183.1| porphobilinogen deaminase [Bacillus sonorensis L12]
Length = 313
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++GEID+AVHSMKD+P+ L + ++ C +RE
Sbjct: 65 EQAMLSGEIDMAVHSMKDMPSALPEGLVIGCIPKREDVRDALISKERQKLAELRNGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V T
Sbjct: 125 TSSLRRSAQLLQIRPDLEIKWIRGNIDTRLKKLETDEYDAIILAAAGLSRMGWKDDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+ I C + DK++ LN T+Q V+ ERAFL ++G C
Sbjct: 185 FLDPESCLPAVGQGALAIECRAADKELLDLFSRLNDRYTQQTVMAERAFLHAMEGGC 241
>gi|223044144|ref|ZP_03614183.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
gi|417905964|ref|ZP_12549758.1| hydroxymethylbilane synthase [Staphylococcus capitis VCU116]
gi|222442538|gb|EEE48644.1| porphobilinogen deaminase [Staphylococcus capitis SK14]
gi|341598350|gb|EGS40861.1| hydroxymethylbilane synthase [Staphylococcus capitis VCU116]
Length = 309
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + + L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + +++ VT L
Sbjct: 128 LRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ + L +++++ Q V ER FL +DGSC
Sbjct: 188 KDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDGSC 241
>gi|427731736|ref|YP_007077973.1| hydroxymethylbilane synthase [Nostoc sp. PCC 7524]
gi|427367655|gb|AFY50376.1| hydroxymethylbilane synthase [Nostoc sp. PCC 7524]
Length = 324
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 73 ELGMINHEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHEKFKDKQIDTLPPGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L M + +
Sbjct: 133 VVGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLGMGDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYL-GSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C ++D ++ L ++ H ETR + ERAFL +L+G C
Sbjct: 193 HQVLPKEVSLHAVGQGALGIECRADDTELISLLKAAIEHPETRDRCLAERAFLRSLEGGC 252
>gi|156742007|ref|YP_001432136.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
gi|189028097|sp|A7NKU8.1|HEM3_ROSCS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156233335|gb|ABU58118.1| porphobilinogen deaminase [Roseiflexus castenholzii DSM 13941]
Length = 303
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL-DKTILPC---------------------------- 32
EEA+ G +D+AVHS KD+P+ L D T+ C
Sbjct: 66 EEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASLPHGARVG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLRKL EG A + A AGLK L + E +T +
Sbjct: 126 TSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLEEVITEL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ++ AV QG IG+ + D ++ + L L+ R A+ ERAFL + G C
Sbjct: 186 LEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIGGGC 241
>gi|314933825|ref|ZP_07841190.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
gi|313653975|gb|EFS17732.1| hydroxymethylbilane synthase [Staphylococcus caprae C87]
Length = 309
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + + L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELTEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + +++ VT L
Sbjct: 128 LRRGAQILSKYPHLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDDIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ + L +++++ Q V ER FL +DGSC
Sbjct: 188 KDVLLPAIGQGALGIECRSDDKELLELLKKVHNQDVAQCVTAERTFLSEMDGSC 241
>gi|161486849|ref|NP_781392.2| porphobilinogen deaminase [Clostridium tetani E88]
Length = 290
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G+ +AVHSMKDVP + + +RE
Sbjct: 63 EKALLDGKAHMAVHSMKDVPYEVPSMFYIGAIPRREDVRDAFVSRDGTKFMELPSGSKIG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRK+ E + T+ A+AGLK LNM E +T+
Sbjct: 123 TSSRRRSSQIKILRPDVEVVPIRGNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDY 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++M+ A+ QGA+GI + + Y+ ++HEETR V ER+F+ L G C
Sbjct: 183 FSPEEMVPAIGQGALGIEIKKYE-DVIDYIKGIDHEETRICVEGERSFMEALKGDC 237
>gi|405373509|ref|ZP_11028282.1| Porphobilinogen deaminase [Chondromyces apiculatus DSM 436]
gi|397087768|gb|EJJ18798.1| Porphobilinogen deaminase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 313
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G DIAVHS+KD+ + + +L +RE
Sbjct: 65 EQALLDGRADIAVHSLKDMTSVFPEGLMLAAVPEREDPRDAFCGLNGVTLDALPQGARVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL + E + L A AGLK L + + +T +
Sbjct: 125 TSSLRRSCILRERRPDVEIVSIRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVITQV 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QG + I C + D ++ + L L H TR AV ERA L L+G C
Sbjct: 185 LPPEVSLPAVGQGVLAIQCRTEDARVRELLAPLEHPTTRIAVTAERALLAKLEGGC 240
>gi|389580484|ref|ZP_10170511.1| porphobilinogen deaminase [Desulfobacter postgatei 2ac9]
gi|389402119|gb|EIM64341.1| porphobilinogen deaminase [Desulfobacter postgatei 2ac9]
Length = 310
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------------TYLLDKTIL 30
E AL++G ID+AVHSMKD+P Y I
Sbjct: 68 EAALLDGSIDLAVHSMKDMPGELPQGLMIGAIPERANPFDVLISAQGAFFKDYPRGAVIG 127
Query: 31 PCNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RL+K+ G A + A AGL+ L +T
Sbjct: 128 TSSLRRASQLKHLRPDIEIKSIRGNLDTRLKKVKSGEYAAIVLAAAGLERLGQGSEITEY 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L DM+ AV QGA+ I ND MA+ L +L+H+ TR V ERAFL ++GSC
Sbjct: 188 LAETDMVPAVGQGALCIETRENDPDMAEILSTLDHDPTRICVTGERAFLKAIEGSC 243
>gi|88813066|ref|ZP_01128308.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
gi|88789699|gb|EAR20824.1| porphobilinogen deaminase [Nitrococcus mobilis Nb-231]
Length = 309
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E + G DIAVHS+KDVP L + LP L+RE
Sbjct: 67 ERGIWEGRADIAVHSIKDVPAELPEGMHLPVVLEREDPCDAFVANLYQDLAALPIGARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL G A + A AGL+ L + E +
Sbjct: 127 TASLRRECQLRAQRPDLRVGTLRGNVQTRLAKLESGKFDAIVLAAAGLRRLGLAERIRCT 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C S+D+++ + + L H + + ERA L+GSC
Sbjct: 187 LTPEQSLPAVGQGALGIECRSDDREINELIAPLTHSPSYLRITAERAVNARLEGSC 242
>gi|119484355|ref|ZP_01618972.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
gi|119457829|gb|EAW38952.1| Porphobilinogen deaminase [Lyngbya sp. PCC 8106]
Length = 321
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N + DIAVHS+KD+PT L + +L C +RE
Sbjct: 72 EVGMLNHDTDIAVHSLKDLPTNLPEGLMLGCVTERENPADALVVHERHKDKQLETLPQGA 131
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+EG A + A+AGLK L M + +
Sbjct: 132 VIGTSSLRRLAQLRHHFPHLEFKDIRGNLNTRLEKLDEGGYDAIILAVAGLKRLGMGDRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D L AV QGA+GI C D+ + + L L H T Q ERAFL L+G C
Sbjct: 192 HQTISPDVSLHAVGQGALGIECRDGDENILEILKVLEHTPTAQRCHAERAFLRELEGGC 250
>gi|429888417|ref|ZP_19369898.1| Porphobilinogen deaminase [Vibrio cholerae PS15]
gi|429224516|gb|EKY30885.1| Porphobilinogen deaminase [Vibrio cholerae PS15]
Length = 311
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKQLRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|358012057|ref|ZP_09143867.1| porphobilinogen deaminase [Acinetobacter sp. P8-3-8]
Length = 308
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + L +RE
Sbjct: 66 EAALLDGRADLAVHSMKDVPMHLPEGLELAVICEREDPFDAFVSNHYEKFEDLPQGAKLG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 126 TSSLRRKSQILKQRPDLDVIDLRGNVGTRLSKLDAGQYDAIILASAGLKRLGLLERIRHT 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+G+ C SNDK++ + L H ET V ERAF L+G C
Sbjct: 186 LTAEISLPAVGQGALGLECRSNDKEILDLIMPLMHAETNACVRAERAFNAYLEGGC 241
>gi|256826210|ref|YP_003150170.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
gi|256689603|gb|ACV07405.1| hydroxymethylbilane synthase [Kytococcus sedentarius DSM 20547]
Length = 358
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 77/175 (44%), Gaps = 47/175 (26%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
+AL+ GEIDIAVHS+KD+P + ++ +RE
Sbjct: 75 DALLAGEIDIAVHSLKDLPVAQPQELVIAAVPEREDPRDALVARDGLTLETLPAGARVGT 134
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV RL + EG + A + A AGL+ L +TE+VT L
Sbjct: 135 GSPRREAQLRVARPDLEVVDLRGNVPRRLATVAEGELDAVVLAGAGLRRLGLTEHVTQWL 194
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A QGA+ + C S+D + L L+H TR A ERA LGTL+ C
Sbjct: 195 EPQVMVPAPGQGALAVECRSDDAESIAMLEPLDHLPTRTATTAERAVLGTLEAGC 249
>gi|148284479|ref|YP_001248569.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
gi|167008815|sp|A5CDH4.1|HEM3_ORITB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|146739918|emb|CAM79909.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Boryong]
Length = 298
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 75/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E AL+N IDIAVHS+KDVP YL D L L+R
Sbjct: 63 EYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGDVGDMLVSKIANKITDLPLGAIVG 122
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNM-TENVTN 73
GNV R K+ + AT+ A AGL+ LN T N
Sbjct: 123 TSSVRRRIQLLMLRPDLNIVLFRGNVDTRWNKIINNEVDATVLAAAGLQRLNYDTSRFCN 182
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P +ML A+ QGAI I +DK + +NH+ T Q + ER +L TL+ C
Sbjct: 183 IIPQSEMLPAIGQGAIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239
>gi|186683929|ref|YP_001867125.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
gi|186466381|gb|ACC82182.1| porphobilinogen deaminase [Nostoc punctiforme PCC 73102]
Length = 336
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N EID AVHS+KD+PT L + L +RE
Sbjct: 86 EVGMLNQEIDFAVHSLKDLPTNLPEGLTLAAITERENPADALVVHEKHKDKQIDTLPEGA 145
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L M++ V
Sbjct: 146 VIGTSSLRRLAQLRHHFPHFTFKDVRGNLITRLAKLDAGEYDALILAAAGLERLGMSDRV 205
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C ++D ++ L ++ H TR + ER+FL +L+G C
Sbjct: 206 HQIIPKEISLHAVGQGALGIECRADDSELLTLLKAIEHPATRDRCLAERSFLRSLEGGC 264
>gi|108761567|ref|YP_630875.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
gi|123374611|sp|Q1D8Z8.1|HEM3_MYXXD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|108465447|gb|ABF90632.1| porphobilinogen deaminase [Myxococcus xanthus DK 1622]
Length = 314
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G DIAVHS+KD+ + + IL +RE
Sbjct: 66 EQALLDGRADIAVHSLKDMTSVFPEGLILAAVPEREDPRDVFCGLGGLTLDTLPQGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL + E + L A AGLK L + + +T +
Sbjct: 126 TSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QG + I C ++D ++ L L H TR AV ERA L L+G C
Sbjct: 186 LPPEVSLPAVGQGVLAIQCRTDDARVRALLVPLEHATTRIAVTAERALLAKLEGGC 241
>gi|336122728|ref|YP_004564776.1| Porphobilinogen deaminase [Vibrio anguillarum 775]
gi|335340451|gb|AEH31734.1| Porphobilinogen deaminase [Vibrio anguillarum 775]
Length = 350
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 84/179 (46%), Gaps = 53/179 (29%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYLLDKTI--LP--- 31
E A++ G D+AVHSMKDVP TY ++I LP
Sbjct: 106 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTY---QSIEQLPQGA 162
Query: 32 ----CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 163 IVGTCSLRRQCQLKAYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRI 222
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+I+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL+G C
Sbjct: 223 RSIIEPEQSLPAVGQGAVGIECRLDDERLRALLAPLNHSDTADRVKCERAMNLTLEGGC 281
>gi|114321817|ref|YP_743500.1| porphobilinogen deaminase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310751|sp|Q0A577.1|HEM3_ALHEH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114228211|gb|ABI58010.1| hydroxymethylbilane synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 308
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ + G D+AVHSMKDVP + D LP L+R
Sbjct: 67 EQGMEEGRADLAVHSMKDVPWRMPDGFALPVILERHEPTDAFVSNHYRRLDDLPEGGHLG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A +GL L E +
Sbjct: 127 TASLRRQCQAKARRPDLRVSTLRGNVNTRLAKLDAGEFDAIILAASGLSRLGFDERIARR 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP ++ L AV QGA+GI C + D+++ + + L+H T + ERA L GSC
Sbjct: 187 LPPEESLPAVGQGALGIECLAEDRRVQELVAPLDHGPTHTLLKAERAMNARLQGSC 242
>gi|428779676|ref|YP_007171462.1| porphobilinogen deaminase [Dactylococcopsis salina PCC 8305]
gi|428693955|gb|AFZ50105.1| porphobilinogen deaminase [Dactylococcopsis salina PCC 8305]
Length = 321
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+N ++D+AVHS+KD+PT L + +L C RE
Sbjct: 73 ELGLLNQDVDLAVHSLKDLPTQLPEGLMLGCVSTRENPADALVLNQAYQGYTIQTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL+KL+ G A + A+AGL+ L M + V
Sbjct: 133 VVGTSSLRRLAQLRYHYPSLVFKDVRGNLNTRLKKLDAGEYDALVLAVAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +P + L AV QGA+GI C D + L ++ ETR + ERAFL L+G C
Sbjct: 193 SQAIPSEISLHAVGQGALGIECREGDTAILDLLKAIEDTETRDRTLAERAFLRELEGGC 251
>gi|229515846|ref|ZP_04405304.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
gi|229527138|ref|ZP_04416532.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229335369|gb|EEO00852.1| porphobilinogen deaminase [Vibrio cholerae 12129(1)]
gi|229347109|gb|EEO12070.1| porphobilinogen deaminase [Vibrio cholerae TMA 21]
Length = 317
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 73 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 133 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 193 IEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 248
>gi|153803403|ref|ZP_01957989.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
gi|124121060|gb|EAY39803.1| porphobilinogen deaminase [Vibrio cholerae MZO-3]
Length = 311
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|72383664|ref|YP_293019.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL2A]
gi|123773715|sp|Q46GS7.1|HEM3_PROMT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|72003514|gb|AAZ59316.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. NATL2A]
Length = 315
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G +IAVHS+KD+PT L D IL C +RE
Sbjct: 67 EAQMLLGHAEIAVHSLKDLPTNLPDGLILGCITKREDPSDALVVNEKNQIHKLETLPEGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G + A AGL+ L +
Sbjct: 127 VVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQRLGFANRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C S +K+ L +L HE T + + ER+FL L+G C
Sbjct: 187 HQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFLRELEGGC 245
>gi|384423468|ref|YP_005632826.1| porphobilinogen deaminase [Vibrio cholerae LMA3984-4]
gi|327483021|gb|AEA77428.1| Porphobilinogen deaminase [Vibrio cholerae LMA3984-4]
Length = 311
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|114568594|ref|YP_755274.1| porphobilinogen deaminase [Maricaulis maris MCS10]
gi|114339056|gb|ABI64336.1| porphobilinogen deaminase [Maricaulis maris MCS10]
Length = 321
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 82/177 (46%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EA ++G AVHSMKDVPT L D +L L+RE
Sbjct: 75 DEAQLDGRAAFAVHSMKDVPTVLPDGIVLGALLEREDPRDMLIARDGETRLADLPEGVTI 134
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV RL KL +G I AT A AGL L E + +
Sbjct: 135 GTASLRRQAQLLHKRPDLHVVPLRGNVDTRLGKLADGGIHATFLARAGLNRLGRAEALRD 194
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ML A AQGA+G+A D++ A Y+ L+H +T AV+ ERAFL LDGSC
Sbjct: 195 PLEADEMLPAAAQGAVGVAIRDGDEEAASYVAGLHHRDTELAVLAERAFLFELDGSC 251
>gi|262172879|ref|ZP_06040557.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
gi|261893955|gb|EEY39941.1| porphobilinogen deaminase [Vibrio mimicus MB-451]
Length = 311
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTI-----LP------ 31
E A++ G D+AVHSMKDVP + T LP
Sbjct: 67 EVAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + N
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLGLESRIRNF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 242
>gi|431800220|ref|YP_007227123.1| porphobilinogen deaminase [Pseudomonas putida HB3267]
gi|430790985|gb|AGA71180.1| porphobilinogen deaminase [Pseudomonas putida HB3267]
Length = 313
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADHEIHALLAPLHHADTADRVVAERALNKRLNGGC 242
>gi|386714975|ref|YP_006181298.1| porphobilinogen deaminase [Halobacillus halophilus DSM 2266]
gi|384074531|emb|CCG46024.1| porphobilinogen deaminase [Halobacillus halophilus DSM 2266]
Length = 309
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
E+A+ +GEID+AVHSMKD+P+ + L +P
Sbjct: 65 EQAMYDGEIDMAVHSMKDMPSEVASGLTVASVPIREDHRDAFVSNGNVALKDLHEGAIVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
+L+R GN+ RLRKL E A + A AGLK + +N VT
Sbjct: 125 TSSLRRSAQIKAVRPDVEVKWIRGNIDTRLRKLKEEDFDAIVLAAAGLKRMGWDDNLVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QGA+ I C ND + +L +NHE T V ER FL L+G C
Sbjct: 185 YLEPDVCVPAVGQGALAIQCRENDSSLRDFLMQINHEYTATTVSAERKFLHDLNGGC 241
>gi|410093666|ref|ZP_11290142.1| porphobilinogen deaminase [Pseudomonas viridiflava UASWS0038]
gi|409758983|gb|EKN44234.1| porphobilinogen deaminase [Pseudomonas viridiflava UASWS0038]
Length = 313
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP D L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPDGLGLFCICEREDARDAFVSNTFASLEDLPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQSQLLARRPDLTIHFLRGNVNTRLAKLDSGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++D L A QGA+GI C S D ++ L L+HE+T V+ ERA L+G C
Sbjct: 187 ISVEDSLPAGGQGAVGIECRSVDAQIHALLAPLHHEDTAVRVIAERALNKHLNGGC 242
>gi|423700033|ref|ZP_17674523.1| hydroxymethylbilane synthase [Pseudomonas fluorescens Q8r1-96]
gi|387996236|gb|EIK57566.1| hydroxymethylbilane synthase [Pseudomonas fluorescens Q8r1-96]
Length = 313
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEALPAGSVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+HE+T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHLNGGC 242
>gi|421870968|ref|ZP_16302590.1| porphobilinogen deaminase [Brevibacillus laterosporus GI-9]
gi|372459595|emb|CCF12139.1| porphobilinogen deaminase [Brevibacillus laterosporus GI-9]
Length = 313
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E++L+ G+ D+AVHS+KD+P L + + +RE
Sbjct: 65 EQSLLEGQTDMAVHSLKDMPAVLPEGLTIGAIPKREDPRDVLISKDGKTLDELKQGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+RKL E A + A AGLK + +T
Sbjct: 125 TSSLRRSSQLLHYRPDLIIKPIRGNIDTRIRKLEEEDFDAIILAAAGLKRVEWKGTITQY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+ I C ++D +M L +H ETR AV ERAFL ++GSC
Sbjct: 185 LDPQISLPAVGQGALAIECRTHDAEMMSLLQRFDHLETRYAVEAERAFLHKMEGSC 240
>gi|337750697|ref|YP_004644859.1| HemC protein [Paenibacillus mucilaginosus KNP414]
gi|336301886|gb|AEI44989.1| HemC [Paenibacillus mucilaginosus KNP414]
Length = 295
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E+AL++GE+D+AVHSMKD+P L + KTI LP
Sbjct: 49 EQALLDGEVDLAVHSMKDMPFELPEGLVVGAVPLREDPRDCLIMREGKTIDDLPQGAKVG 108
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +RLRKL A L A AGL + ++ +++
Sbjct: 109 TSSLRRASQLQHYRPDLKIEPIRGNIDSRLRKLETEGFDAILLAAAGLHRIGWSDRISSY 168
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+ I C S++ + L HE T AV ER+FLG L+G C
Sbjct: 169 LPPELCLPAVGQGALCIECRSDNDFVLNLLSKYLHEPTAVAVAAERSFLGRLNGGC 224
>gi|303257759|ref|ZP_07343771.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|331001196|ref|ZP_08324823.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
gi|302859729|gb|EFL82808.1| hydroxymethylbilane synthase [Burkholderiales bacterium 1_1_47]
gi|329569128|gb|EGG50920.1| hydroxymethylbilane synthase [Parasutterella excrementihominis YIT
11859]
Length = 310
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ G+ IAVHS+KDVP LL+ L + RE
Sbjct: 68 EAAMLEGKAQIAVHSLKDVPMDLLEPFTLAAVMVREDPRDAVVSHKYASLEEMPAGSVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G + A+AGLK L +++ + +I
Sbjct: 128 TSSLRRELMVRSRFPHLKVEMIRGNVGTRLSKLDNGQYDTLVMAVAGLKRLGLSDRIRSI 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L A QGAIGI ND+ KY+ +LN E+TR ERA L GSC
Sbjct: 188 IPPEVSLPAPGQGAIGIEAVGNDEMTQKYVEALNDEDTRLCTQAERAVSRALGGSC 243
>gi|297201478|ref|ZP_06918875.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
gi|197716811|gb|EDY60845.1| porphobilinogen deaminase [Streptomyces sviceus ATCC 29083]
Length = 319
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 51/179 (28%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
EAL+ GE+D AVHS+KD+PT D+ +L +RE
Sbjct: 66 EALLKGEVDFAVHSLKDLPTGQPDELVLAALPEREDPRDVIVARDALKFTDLPPGARIGT 125
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ R+R + +G + A + A AGL+ + + V
Sbjct: 126 GSPRRTAQLNAYARAHGLDIETVAIRGNIDTRMRFVRDGELDAVVLAAAGLQRIGRIDEV 185
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
T+ L +D +L A QGA+ I CT+++ + LG L+ TR AV ER+ L L+ C
Sbjct: 186 TDFLSVDTVLPAPGQGALAIECTADNADLIAALGELDDPFTRVAVTAERSLLAALEAGC 244
>gi|381210503|ref|ZP_09917574.1| porphobilinogen deaminase [Lentibacillus sp. Grbi]
Length = 309
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK---TILP--------------------------- 31
E AL EID+AVHSMKD+P+ + + T +P
Sbjct: 65 ERALYEKEIDLAVHSMKDMPSVMPEGLVITTIPVREDHRDAYIAKNNVALKDLPEGAIVG 124
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
+L+R+ GN+++R+RKLNE A + A++GLK + ++E+ +T
Sbjct: 125 TSSLRRKAQILAERPDLEIKWIRGNIESRIRKLNEEDYDAIILAVSGLKRVGLSEDLITE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QGA+ I C +D ++ K L ++ ET + V ER FL L+GSC
Sbjct: 185 YLEPDVCVPAVGQGALAIECREDDHELRKLLAGISDAETTKTVTAERTFLKLLEGSC 241
>gi|303326737|ref|ZP_07357179.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862725|gb|EFL85657.1| hydroxymethylbilane synthase [Desulfovibrio sp. 3_1_syn3]
Length = 310
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHS+KDVP L + IL C QRE
Sbjct: 66 EEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDALPQKAHVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G A + A AGL L ++
Sbjct: 126 TSSLRRQAQLLSMRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGLSAPYMAP 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C ++ + L SL + TR V ER FL L+G C
Sbjct: 186 LDPERFLPAVGQGALGIECREDNYDLLVLLASLENRATRVCVDAERGFLAGLEGGC 241
>gi|389572044|ref|ZP_10162132.1| porphobilinogen deaminase [Bacillus sp. M 2-6]
gi|388428530|gb|EIL86327.1| porphobilinogen deaminase [Bacillus sp. M 2-6]
Length = 311
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N +ID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQAMLNHDIDMAVHSMKDMPASLPEGLVIGCIPEREDVRDALISKDHLRLHELPKGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL A + A AGL + + E V+
Sbjct: 125 TSSLRRSAQLLQERPDLEIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSQEVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C +D+++ + L +E T++ V+ ERAFL +DGSC
Sbjct: 185 FLSPDTCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDGSC 241
>gi|212554780|gb|ACJ27234.1| Porphobilinogen deaminase [Shewanella piezotolerans WP3]
Length = 294
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ DIAVHSMKDVP + L +RE
Sbjct: 51 EVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNFSSINELPQGAVVG 110
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + E +T+
Sbjct: 111 TSSLRRQCQIRAARPDLQIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERITSF 170
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L A QGA+GI C ++D ++ L L H ETRQ V+ ERA L+G C
Sbjct: 171 ISAEDSLPANGQGAVGIECRTDDARVKALLAPLEHLETRQRVIAERAMNTRLEGGC 226
>gi|56416851|ref|YP_153925.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
gi|56388083|gb|AAV86670.1| porphobilinogen deaminase [Anaplasma marginale str. St. Maries]
Length = 303
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ +IDIAVHS KDVP + + +PC L+R
Sbjct: 67 EEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAKIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+ K+ G + A AG+ ++ +T +
Sbjct: 127 TSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKITEV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV QGAI + C +D+ + + L LN E+ AV+ ER+F+ ++GSC
Sbjct: 187 LHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSC 242
>gi|374319912|ref|YP_005073041.1| phosphate ABC transporter ATPase [Paenibacillus terrae HPL-003]
gi|357198921|gb|AET56818.1| phosphate ABC transporter ATPase [Paenibacillus terrae HPL-003]
Length = 308
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------------------- 26
E+A++ GEID+AVHSMKD+P+ L +
Sbjct: 69 EQAMLAGEIDMAVHSMKDMPSELPEGLVNGAVPRREDPRDCLVTLGFKSLEDLPQGAKVG 128
Query: 27 ----------KTILPCNLQRE---GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
K++ P +LQ E GN+ +RL+KL A + A AGL + + +T+
Sbjct: 129 TSSLRRASQIKSLRP-DLQLEPVRGNIDSRLKKLETEGFDAIILAAAGLHRMGWKDRITS 187
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ++D+++ L N +T V ER FLG L+G C
Sbjct: 188 YIPEEACLPAVGQGALGIECRADDEELLALLHLYNDRDTSATVAAERTFLGVLNGGC 244
>gi|334128087|ref|ZP_08501988.1| hydroxymethylbilane synthase [Centipeda periodontii DSM 2778]
gi|333388409|gb|EGK59588.1| hydroxymethylbilane synthase [Centipeda periodontii DSM 2778]
Length = 271
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+A++ GEID+AVHS+KD+PT + + ++ QR
Sbjct: 27 EQAMLAGEIDLAVHSLKDMPTEVPEGLVIGAITQRLDAGDAFVSVHYRSMEDLPQGARVG 86
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + E + I
Sbjct: 87 TSSLRRRAQLLAVRPDLTILDLRGNVNTRLAKLDAGEFDAIVLAAAGLKRLGLGERIRTI 146
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP +L AV QGA+ I C ++D ++ + + L E A ERAFL ++G C
Sbjct: 147 LPRAMILPAVGQGALAIECRADDGRIQEMIDFLRDTEMTAAATAERAFLRRVEGGC 202
>gi|198284968|ref|YP_002221289.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666388|ref|YP_002427653.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|226740625|sp|B7JBH8.1|HEM3_ACIF2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226740626|sp|B5ERN6.1|HEM3_ACIF5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|198249489|gb|ACH85082.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218518601|gb|ACK79187.1| porphobilinogen deaminase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 306
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY------------------------LLDKTILP------ 31
E+AL +D+AVHSMKDVP L LP
Sbjct: 66 EDALQQRRVDVAVHSMKDVPALQPDGLEIVAIMAREDVRDAFVSNTFLHPDALPEGARVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLR+L+EG A + A AGLK L + + +T++
Sbjct: 126 SSSLRRRAQLLERYPHLRVEDLRGNVATRLRRLDEGHYDAIILAAAGLKRLGLPDRITHL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID L AV QGAIGI S+D++ + L L +T+ V+ ER+ L G C
Sbjct: 186 LDIDRSLPAVGQGAIGIEARSDDRRTRELLAPLADADTQNCVLAERSMNQVLGGDC 241
>gi|300774730|ref|ZP_07084593.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
gi|300506545|gb|EFK37680.1| hydroxymethylbilane synthase [Chryseobacterium gleum ATCC 35910]
Length = 302
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 83/173 (47%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+N EIDIAVHS+KDVPT L + L+R+
Sbjct: 65 ALLNDEIDIAVHSLKDVPTQLPQNIEMIAYLERDYPQDILIRKESSRNKEFHELKLATSS 124
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GN+Q RL+KL EG AT+ +LAG+K + M E +LP+
Sbjct: 125 LRRRAFWLRNYPTAEFSDIRGNIQTRLQKLEEGDFDATILSLAGIKRMKM-EIDYEMLPL 183
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG I +A ++ ++ + + +NH+ET+ V ER FL TL+G C
Sbjct: 184 --MISAPSQGVISVAGHTDKPEINEIVRQINHQETQICVEIERNFLSTLEGGC 234
>gi|222475216|ref|YP_002563632.1| porphobilinogen deaminase [Anaplasma marginale str. Florida]
gi|255003192|ref|ZP_05278156.1| porphobilinogen deaminase [Anaplasma marginale str. Puerto Rico]
gi|269958734|ref|YP_003328521.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
gi|222419353|gb|ACM49376.1| porphobilinogen deaminase (hemC) [Anaplasma marginale str. Florida]
gi|269848563|gb|ACZ49207.1| porphobilinogen deaminase [Anaplasma centrale str. Israel]
Length = 303
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ +IDIAVHS KDVP + + +PC L+R
Sbjct: 67 EEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAKIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+ K+ G + A AG+ ++ +T +
Sbjct: 127 TSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKITEV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV QGAI + C +D+ + + L LN E+ AV+ ER+F+ ++GSC
Sbjct: 187 LHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSC 242
>gi|170719443|ref|YP_001747131.1| porphobilinogen deaminase [Pseudomonas putida W619]
gi|229836111|sp|B1J1V2.1|HEM3_PSEPW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169757446|gb|ACA70762.1| porphobilinogen deaminase [Pseudomonas putida W619]
Length = 313
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNRFSSLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E +T
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEERITAS 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHTDTADRVVAERALNKHLNGGC 242
>gi|254995040|ref|ZP_05277230.1| porphobilinogen deaminase [Anaplasma marginale str. Mississippi]
Length = 303
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ +IDIAVHS KDVP + + +PC L+R
Sbjct: 67 EEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAKIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+ K+ G + A AG+ ++ +T +
Sbjct: 127 TSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKITEV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV QGAI + C +D+ + + L LN E+ AV+ ER+F+ ++GSC
Sbjct: 187 LHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSC 242
>gi|363421366|ref|ZP_09309453.1| porphobilinogen deaminase [Rhodococcus pyridinivorans AK37]
gi|359734521|gb|EHK83496.1| porphobilinogen deaminase [Rhodococcus pyridinivorans AK37]
Length = 336
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 47/175 (26%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
EAL+ GE+D+AVHS KD+PT+ + ++ +RE
Sbjct: 78 EALLAGEVDVAVHSYKDLPTFQDPRLVVAAVPEREDPRDALVARDGLVLGELPPGSKVGT 137
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GN+ R+ K++ G + A + A AGL + + VT L
Sbjct: 138 SAPRRRAQLAALGLGLQIEPLRGNIDTRIGKVDSGELDAIVIARAGLSRIGRLDRVTESL 197
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A +QGA+ + C S+D +M + L L+H +R AVV ER+ L L+ C
Sbjct: 198 EPVQMLPAPSQGALAVECRSDDPEMIELLAGLDHAPSRAAVVAERSLLAELEAGC 252
>gi|385786857|ref|YP_005817966.1| porphobilinogen deaminase [Erwinia sp. Ejp617]
gi|310766129|gb|ADP11079.1| porphobilinogen deaminase [Erwinia sp. Ejp617]
Length = 313
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL---------------DKTI---------LP------ 31
E+A+++G DIAVHSMKDVP D + LP
Sbjct: 67 EQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDSLPQGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L +++ + +
Sbjct: 127 TSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLGLSDRIRQV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D L +LNH+ET V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDMHTIGLLAALNHDETACRVSAERAMNTRLEGGC 242
>gi|255004322|ref|ZP_05279123.1| porphobilinogen deaminase [Anaplasma marginale str. Virginia]
Length = 303
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ +IDIAVHS KDVP + + +PC L+R
Sbjct: 67 EEALLANKIDIAVHSAKDVPGFYSENLDMPCVLKRRSPMDVFISVKYKSLNSLPAGAKIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+ K+ G + A AG+ ++ +T +
Sbjct: 127 TSSIRRKVQLLAFRPDLEITPMRGNVDTRIAKVQSGECDGIVLAEAGVDRISARAKITEV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV QGAI + C +D+ + + L LN E+ AV+ ER+F+ ++GSC
Sbjct: 187 LHPDVMLGAVGQGAICVQCRKSDEGIVRMLAKLNDHESFTAVLAERSFMKAVNGSC 242
>gi|238897905|ref|YP_002923584.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259647800|sp|C4K4E3.1|HEM3_HAMD5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229465662|gb|ACQ67436.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 309
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL------------------------DKTILP------ 31
E A+++ DIAVHS+KD+P Y D LP
Sbjct: 67 ERAVLDNRADIAVHSIKDMPLYFPEGLGLVAVCEREDPRDAFLSLRYHDVAQLPEGSVVG 126
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L + GNV ARL+KL++G A + A+AGLK L + +T I
Sbjct: 127 TSSLRRQCQLYKNYPGIVVRDLRGNVGARLKKLDQGDYDAIVLAVAGLKRLGLENRMTQI 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A QGAIGI C +D + + +LNH ++ + CERA L L+G C
Sbjct: 187 LRPETSLPAAGQGAIGIECRLDDTVTLQRVATLNHRPSQLKISCERALLKRLEGGC 242
>gi|424658025|ref|ZP_18095294.1| porphobilinogen deaminase [Vibrio cholerae HE-16]
gi|408057015|gb|EKG91884.1| porphobilinogen deaminase [Vibrio cholerae HE-16]
Length = 311
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRSDLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|428306573|ref|YP_007143398.1| hydroxymethylbilane synthase [Crinalium epipsammum PCC 9333]
gi|428248108|gb|AFZ13888.1| hydroxymethylbilane synthase [Crinalium epipsammum PCC 9333]
Length = 334
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ +++ + D+AVHS+KD+PT L + IL C +RE
Sbjct: 73 EQGMLDNDTDLAVHSLKDLPTRLPEGLILGCVTERENPADALVVHEKHKDKQLETLPAGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGL L M++ V
Sbjct: 133 VVGTSSLRRLAQLRHHFPHLAFKDVRGNLNTRLAKLDAGEYDAIILAVAGLNRLGMSDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGS-LNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C ++D ++ + L L H T Q ERAFL L+G C
Sbjct: 193 HQIIPPEVSLHAVGQGALGIECRTDDTEVLEILKKVLEHTPTAQRCYAERAFLRELEGGC 252
>gi|330812535|ref|YP_004356997.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380643|gb|AEA71993.1| porphobilinogen deaminase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 313
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEALPAGSVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+HE+T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHLNGGC 242
>gi|315122376|ref|YP_004062865.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495778|gb|ADR52377.1| porphobilinogen deaminase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 307
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E LI+GEID AVHS KD+PT LL + L RE
Sbjct: 69 ERKLISGEIDFAVHSAKDMPTKLLKGLRISAYLPREDVRDVFISHTAQSLNDLAVNSIVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G ++ RL KL A L A AG+K L V I
Sbjct: 129 TSSLRRKALLLRWRADLSIIDFRGKIETRLTKLKNKQADAMLLAYAGIKRLKKESVVKEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++D + QGAI I N+ + + ++NH ET V CERAFL LDGSC
Sbjct: 189 LNLEDFPPSPGQGAICIETHMNNTRAHELATAINHRETWDTVSCERAFLAELDGSC 244
>gi|288553611|ref|YP_003425546.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
gi|288544771|gb|ADC48654.1| porphobilinogen deaminase [Bacillus pseudofirmus OF4]
Length = 310
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL N EIDIAVHSMKDVP+ + + L +RE
Sbjct: 65 EQALENKEIDIAVHSMKDVPSVMPEGFSLAAITEREDARDAFISLDHVKLKDLPSGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GNV+ RLRKL E A + A AGL L +E VT
Sbjct: 125 TSSLRRSAQLLAERPDLEVKWIRGNVETRLRKLKEEDFSAIILAAAGLNRLGYSEELVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + AV QGA+G+ C S+D+++ + + LN E T V ER FL ++G C
Sbjct: 185 YLEPEMCVPAVGQGALGLECRSDDQEVIELIQKLNDEATALTVTAERTFLHKMEGGC 241
>gi|262373963|ref|ZP_06067240.1| porphobilinogen deaminase [Acinetobacter junii SH205]
gi|262310974|gb|EEY92061.1| porphobilinogen deaminase [Acinetobacter junii SH205]
Length = 305
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + L +RE
Sbjct: 65 EAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNQYAHFDELPHGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L + E + +
Sbjct: 125 TSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLAERIRHC 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C ++D+++ + + L HE T V ERAF L+G C
Sbjct: 185 LAPTLSLPAVGQGALGLECRADDQELLELISPLQHEVTSICVRAERAFNAYLEGGC 240
>gi|154148130|ref|YP_001406461.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
gi|166201500|sp|A7I1S0.1|HEM3_CAMHC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|153804139|gb|ABS51146.1| porphobilinogen deaminase [Campylobacter hominis ATCC BAA-381]
Length = 308
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE+++ GE D+AVHS+KDVP IL +RE
Sbjct: 64 EESMLRGESDLAVHSLKDVPVVFPKGLILTAISEREDVRDSFVSEKFASFNELPKGAKVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL E A + A AGLK LN+ EN+
Sbjct: 124 TTSLRRKMQLLIKRPDLKIISLRGNINTRLRKLKENEFDAIILASAGLKRLNLMENIKYF 183
Query: 75 LP--IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P +D+M+ A+ QGA+GI C + ++ + L +N+E + A ER F+ L+G C
Sbjct: 184 VPFSLDEMIPAMGQGALGIECV-DKSEVIEILKFINNENSVIATTIERDFVAKLNGGC 240
>gi|417950406|ref|ZP_12593528.1| porphobilinogen deaminase [Vibrio splendidus ATCC 33789]
gi|342806529|gb|EGU41749.1| porphobilinogen deaminase [Vibrio splendidus ATCC 33789]
Length = 312
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + + + +
Sbjct: 128 TCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLKLEDRIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LN ++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNDKDTADRVLCERAMNLTLEGGC 243
>gi|383755210|ref|YP_005434113.1| putative porphobilinogen deaminase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367262|dbj|BAL84090.1| putative porphobilinogen deaminase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 314
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 81/173 (46%), Gaps = 47/173 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYL------------LD----------KTI--LPC-------N 33
+++G ID+AVHS+KD+PT L D KT LPC +
Sbjct: 69 MLDGGIDLAVHSLKDMPTELPAGLCLAAITKRFDPGDAVVSPKFKTFDALPCGAKVGTSS 128
Query: 34 LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
L+R+ GNV RL KL A + A+AGLK L E +T +LP
Sbjct: 129 LRRKAQLLHARPDLNICDLRGNVNTRLAKLESENFDAIILAVAGLKRLGFGERITEVLPQ 188
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +L AV QGA+ I +D +M + L LN E T ERAFLG ++G C
Sbjct: 189 EMVLPAVGQGALAIETREDDAEMREMLAFLNDEATVHCAKAERAFLGRVEGGC 241
>gi|153826278|ref|ZP_01978945.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
gi|149739946|gb|EDM54125.1| porphobilinogen deaminase [Vibrio cholerae MZO-2]
Length = 311
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGALGIECRVDDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>gi|403379295|ref|ZP_10921352.1| phosphate ABC transporter ATPase [Paenibacillus sp. JC66]
Length = 316
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY--------LLDKTILP---------------------- 31
E+AL++G IDIAVHSMKDVP+ + K + P
Sbjct: 69 EQALLDGVIDIAVHSMKDVPSERQQGLILGAIPKRVDPRDCIISNGHVKLDELPEGALIG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +R+RKL A + A AGL+ + + V+
Sbjct: 129 TSSLRRAAQIKAYRPDLRIESIRGNIDSRIRKLTSEGFDAIVLAAAGLQRMGWLDRVSQF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+G+ C +D ++ K L N E+ + V ER+FL L+G C
Sbjct: 189 LPPELCLPAVGQGALGVECRESDAELVKLLAHYNDLESAETVQAERSFLARLNGGC 244
>gi|348027108|ref|YP_004766913.1| hydroxymethylbilane synthase [Megasphaera elsdenii DSM 20460]
gi|341823162|emb|CCC74086.1| hydroxymethylbilane synthase [Megasphaera elsdenii DSM 20460]
Length = 311
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK------------------------TILPC----- 32
E+ L++G ID+AVHS+KD+P + D LP
Sbjct: 66 EQRLLDGTIDLAVHSLKDLPADVPDGLCLAAITARHHVHDAFVSNTYASLEALPAGARIG 125
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL+KL++G A + A AGL+ L + +T +
Sbjct: 126 TSSLRRKAQLLHTRPDLFVADLRGNVDTRLKKLDDGQYDAIILAEAGLQRLGRADRITQL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D M+ AV QGA+ I ++D+ + + L LN E T A ER FL ++GSC
Sbjct: 186 LPVDTMIPAVGQGALAIETRADDESLKQALAFLNDEGTAAATTAERTFLAAINGSC 241
>gi|399155864|ref|ZP_10755931.1| porphobilinogen deaminase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL---------------DKTILP--------------- 31
E AL+ G D+AVHSMKDV ++L D I P
Sbjct: 76 EYALLEGRADLAVHSMKDVTSFLPQGLEISVIAEREDPGDAWICPKFGSIDNFPGGAVVG 135
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV+ RLRKL++G + A + A++GLK + + + +T I
Sbjct: 136 TSSLRRASQLQHHRPDLTVMSLRGNVETRLRKLDQGEVDAVILAVSGLKRIKLEKRITEI 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LPI+ ML A+ QGAIGI + D+ + ++ T ++ ER+ L L+G+C
Sbjct: 196 LPIEWMLPAIGQGAIGIETRAGDEAALSRIQHIHDPLTWDCLLAERSLLVELEGNC 251
>gi|104784255|ref|YP_610753.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
gi|123380753|sp|Q1I316.1|HEM3_PSEE4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|95113242|emb|CAK17970.1| porphobilinogen deaminase [Pseudomonas entomophila L48]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFKSLEALPAGSVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLVRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHIDTADRVVAERALNKRLNGGC 242
>gi|226951768|ref|ZP_03822232.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
gi|226837483|gb|EEH69866.1| porphobilinogen deaminase [Acinetobacter sp. ATCC 27244]
Length = 305
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L D L +RE
Sbjct: 65 EAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L + + + +
Sbjct: 125 TSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLADRIRHC 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C ++D+K+ + L HEET V ERA L+G C
Sbjct: 185 LAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGGC 240
>gi|345890748|ref|ZP_08841612.1| porphobilinogen deaminase [Desulfovibrio sp. 6_1_46AFAA]
gi|345048974|gb|EGW52794.1| porphobilinogen deaminase [Desulfovibrio sp. 6_1_46AFAA]
Length = 310
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G D+AVHS+KDVP L + IL C QRE
Sbjct: 66 EEALLDGRADLAVHSIKDVPMVLPEGLILGCVPQREACTDCFLSVHYADPDALPQKAHVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G A + A AGL L ++
Sbjct: 126 TSSLRRQAQLLSIRPDLRISSLRGNVDTRLRKLQNGEYDAIILASAGLNRLGLSAPYMAP 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C ++ + L SL TR V ER FL L+G C
Sbjct: 186 LDPERFLPAVGQGALGIECREDNYDLLVLLASLEDRATRVCVDAERGFLAGLEGGC 241
>gi|350560094|ref|ZP_08928934.1| porphobilinogen deaminase [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782362|gb|EGZ36645.1| porphobilinogen deaminase [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 309
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ DIAVHS+KDVP L ++ +LP L+RE
Sbjct: 66 ELAMLEDRADIAVHSVKDVPMELPERLVLPVILEREDPLDAFVSNDHENLDALPEGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL +L+ G A L A AGLK L E +
Sbjct: 126 SSSLRRQCQLRARRPDLEITDLRGNVNTRLARLDSGDYDAILLAAAGLKRLGFEERIRAR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGAI I C D ++ + LNH ET + V ERAF L+G C
Sbjct: 186 LDPSVSLPAVGQGAIAIECRDGDSEVMDLISGLNHAETAERVRAERAFNRRLEGGC 241
>gi|226311390|ref|YP_002771284.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
gi|259647803|sp|C0ZAH1.1|HEM3_BREBN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226094338|dbj|BAH42780.1| porphobilinogen deaminase [Brevibacillus brevis NBRC 100599]
Length = 309
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E++L + E D AVHS+KD+P L D KT+ LP
Sbjct: 65 EQSLFDKETDFAVHSLKDMPAELPDGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGALVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ R+RKL EG A + A AGL+ +N ++
Sbjct: 125 TSSLRRSSQILAYRPDIQIESLRGNIDTRMRKLAEGNFDAIILAAAGLERVNFEGEISQF 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L AV QGA+ I C ++D++ L + TR AV ER+FL L G C
Sbjct: 185 LPVEISLPAVGQGALAIECRADDEETLALLKQFDDAPTRLAVSAERSFLHKLQGGC 240
>gi|294649011|ref|ZP_06726459.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
gi|292825146|gb|EFF83901.1| hydroxymethylbilane synthase [Acinetobacter haemolyticus ATCC
19194]
Length = 305
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L D L +RE
Sbjct: 65 EAALLDGRADLAVHSMKDVPMHLPDGLTLAVICEREDPLDAFVSNQYARFEDLPQGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L + + + +
Sbjct: 125 TSSLRRKCQILQQRPDLEIVDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLADRIRHC 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C ++D+K+ + L HEET V ERA L+G C
Sbjct: 185 LAPVLSLPAVGQGALGLECRADDEKLLALIQPLQHEETSICVRAERALNAYLEGGC 240
>gi|410479506|ref|YP_006767143.1| porphobilinogen deaminase [Leptospirillum ferriphilum ML-04]
gi|206603978|gb|EDZ40458.1| Porphobilinogen deaminase [Leptospirillum sp. Group II '5-way CG']
gi|406774758|gb|AFS54183.1| porphobilinogen deaminase [Leptospirillum ferriphilum ML-04]
Length = 314
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ EID+AVHSMKDVP +L L L+RE
Sbjct: 66 EEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLKREDPRDVFLSPHYPDIKSLPHKARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RK+ +GV++A + A AGL L V
Sbjct: 126 TSSLRRLAQIREFRSDLEFIPLRGNVGTRIRKMEDGVVEAIILAGAGLLRLGHANRVREW 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +L A+ QGA+G+ ++D+ + SL+ E T +V ER L +L+G C
Sbjct: 186 ISPQVLLPAIGQGALGLEIRTDDETTGTLIRSLSDESTHLSVAAERGVLQSLNGGC 241
>gi|442610618|ref|ZP_21025329.1| Porphobilinogen deaminase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747835|emb|CCQ11391.1| Porphobilinogen deaminase [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 312
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E+A+++G DIAVHSMKDVP D TI LP
Sbjct: 69 EQAMLDGRADIAVHSMKDVPVEFPDGLELHTICEREDPRDAFVSNAFDSIEALPQGAVVG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L M E + N
Sbjct: 129 TSSLRRQCQLRALRPDLIIKDLRGNVNTRLAKLDAGEYDAIILAAAGLLRLEMPERIRNF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C SND++ L L H+ TR V ERA L+G C
Sbjct: 189 IAPEISLPANGQGAVGIECRSNDERTKALLAPLEHKPTRLRVDAERAMNTRLEGGC 244
>gi|402297609|ref|ZP_10817371.1| porphobilinogen deaminase [Bacillus alcalophilus ATCC 27647]
gi|401727146|gb|EJT00342.1| porphobilinogen deaminase [Bacillus alcalophilus ATCC 27647]
Length = 310
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +GEID+AVHSMKDVP+ L + +RE
Sbjct: 65 ERALADGEIDMAVHSMKDVPSELQPGFTIGAVPEREDPRDALISNNHVKLADLPSGSIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GNV+ RL KL + A + A AGLK L +E VT
Sbjct: 125 TSSLRRSAQLLAERPDLEIQWIRGNVETRLSKLEDENFDAIILAAAGLKRLGYSEELVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + AV QGA+GI C S+D+++ + L +N T + V ERAFL ++G C
Sbjct: 185 YLDTETCIPAVGQGALGIECRSDDEEVKQLLAEINDTITERIVTAERAFLHKIEGGC 241
>gi|340710928|ref|XP_003394035.1| PREDICTED: porphobilinogen deaminase-like [Bombus terrestris]
Length = 357
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 77/181 (42%), Gaps = 52/181 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G +D VHS+KD+PT L + L L+RE
Sbjct: 71 ELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNETLSTLPKGS 130
Query: 38 --------------------------GNVQARLRKLNE--GVIQATLSALAGLKCLNMTE 69
GN+ RLRKL++ G A + A+AGLK LN
Sbjct: 131 VIGTSSLRRTAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAVAGLKRLNWEN 190
Query: 70 NVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
+ IL ++ L AV QGA+G+ C D K+ L L ET VCER+FL TL G
Sbjct: 191 RINQILEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSFLKTLGGG 250
Query: 130 C 130
C
Sbjct: 251 C 251
>gi|398817586|ref|ZP_10576201.1| porphobilinogen deaminase [Brevibacillus sp. BC25]
gi|398029707|gb|EJL23156.1| porphobilinogen deaminase [Brevibacillus sp. BC25]
Length = 309
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------LDKTILP---------------------- 31
E++L + E D AVHS+KD+P L + K + P
Sbjct: 65 EQSLFDRETDFAVHSLKDMPAELPEGLVIGAIPKRVDPRDVLLSKDGKTLDELPQGALVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ R+RKL EG A + A AGL+ +N N++
Sbjct: 125 TSSLRRSAQILAHRPDIQIESLRGNIDTRIRKLEEGNFDAIILAAAGLERVNFEGNISQF 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L AV QGA+ I C ++D++ L + TR AV ER+FL L G C
Sbjct: 185 LPVEISLPAVGQGALAIECRADDEETLALLKQFDDALTRLAVTAERSFLHKLQGGC 240
>gi|88861269|ref|ZP_01135901.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
gi|88816750|gb|EAR26573.1| porphobilinogen deaminase [Pseudoalteromonas tunicata D2]
Length = 312
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E+A++ G DIAVHSMKDVP + KTI LP
Sbjct: 69 EQAMLEGRADIAVHSMKDVPVEFPEGLELNTICEREDPRDAFVSNRFKTIEELPQGAVVG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+EG A + A AGL L M + + +
Sbjct: 129 TSSLRRQCQIRALRPDLEIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEMPQRIASF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C S+D + L +L H ETR V+ ERA L+G C
Sbjct: 189 IEPEQSLPANGQGAVGIECRSDDITTKQLLAALEHTETRIRVLAERAMNRRLEGGC 244
>gi|379723746|ref|YP_005315877.1| HemC protein [Paenibacillus mucilaginosus 3016]
gi|378572418|gb|AFC32728.1| HemC [Paenibacillus mucilaginosus 3016]
Length = 315
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL----------PCNLQREG------------- 38
E+AL++GE+D+AVHSMKD+P L + ++ C + REG
Sbjct: 69 EQALLDGEVDLAVHSMKDMPFELPEGLVVGAVPLREDPRDCLIMREGRTIDDLPQGAKVG 128
Query: 39 ------------------------NVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
N+ +RLRKL A L A AGL + ++ +++
Sbjct: 129 TSSLRRASQLQHYRPDLKIEPIRGNIDSRLRKLETEGFDAILLAAAGLHRIGWSDRISSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+ I C S++ + L HE T AV ER+FLG L+G C
Sbjct: 189 LPPELCLPAVGQGALCIECRSDNDIVLNLLSKYLHEPTAVAVAAERSFLGRLNGGC 244
>gi|350400702|ref|XP_003485929.1| PREDICTED: porphobilinogen deaminase-like [Bombus impatiens]
Length = 357
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 77/181 (42%), Gaps = 52/181 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G +D VHS+KD+PT L + L L+RE
Sbjct: 71 ELALESGRVDFVVHSLKDLPTSLPEGMALGAILKREDPRDAVVMSKKYKNETLSTLPKGS 130
Query: 38 --------------------------GNVQARLRKLNE--GVIQATLSALAGLKCLNMTE 69
GN+ RLRKL++ G A + A+AGLK LN
Sbjct: 131 VIGTSSLRRTAQLARNMPHLKVENIRGNLNTRLRKLDDENGPFAAIILAVAGLKRLNWEN 190
Query: 70 NVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
+ IL ++ L AV QGA+G+ C D K+ L L ET VCER+FL TL G
Sbjct: 191 RINQILEPEEALYAVGQGALGVECRETDWKILSLLEPLYDVETTLRCVCERSFLKTLGGG 250
Query: 130 C 130
C
Sbjct: 251 C 251
>gi|254226598|ref|ZP_04920179.1| porphobilinogen deaminase [Vibrio cholerae V51]
gi|125620870|gb|EAZ49223.1| porphobilinogen deaminase [Vibrio cholerae V51]
Length = 317
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 73 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 133 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ L LNH +T V CERA TL G C
Sbjct: 193 IEPEQSLPAVGQGAVGIECRVDDQRVRALLTPLNHADTADRVRCERAMNLTLQGGC 248
>gi|434391795|ref|YP_007126742.1| hydroxymethylbilane synthase [Gloeocapsa sp. PCC 7428]
gi|428263636|gb|AFZ29582.1| hydroxymethylbilane synthase [Gloeocapsa sp. PCC 7428]
Length = 326
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E + + EID AVHS+KD+PT L + +L +RE
Sbjct: 77 EVGMQSHEIDFAVHSLKDLPTNLPEGLMLGVVTEREDPADALVVHEKHKDKQIDTLPEGA 136
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGL+ L M + +
Sbjct: 137 VVGTSSLRRLAQLRHHFPHLTFKDIRGNLNTRLAKLDAGEYDAIILAVAGLRRLGMGDRI 196
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP + L AV QGA+GI C ++D ++ + ++ H TR + ERAFL +L+G C
Sbjct: 197 HQVLPAEVSLHAVGQGALGIECRADDTEVLSLIKAIEHVPTRDRTLAERAFLRSLEGGC 255
>gi|373459884|ref|ZP_09551651.1| Porphobilinogen deaminase [Caldithrix abyssi DSM 13497]
gi|371721548|gb|EHO43319.1| Porphobilinogen deaminase [Caldithrix abyssi DSM 13497]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
EEAL+ +IDIAVHS+KD+P+ + L+ +P
Sbjct: 66 EEALLQEKIDIAVHSLKDLPSAMSQGLELAAIPPRGPVEDVLITQGGLTLNQLPAGARIA 125
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L + GN+ RLRKL+E + + ALA +K L++ +
Sbjct: 126 TGSIRRRCQLLQMRPDLRMEDLRGNIDTRLRKLHEQNLDGIIMALAAIKRLDIEGLYFQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++M+ A+ QGAIGI SNDK + L LNH T VV ER+ L TLD C
Sbjct: 186 FKSNEMIPAIGQGAIGIQIRSNDKPLKTMLEKLNHIPTYYGVVAERSLLKTLDTGC 241
>gi|317486609|ref|ZP_07945428.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
gi|345887225|ref|ZP_08838421.1| porphobilinogen deaminase [Bilophila sp. 4_1_30]
gi|316922143|gb|EFV43410.1| porphobilinogen deaminase [Bilophila wadsworthia 3_1_6]
gi|345037511|gb|EGW42039.1| porphobilinogen deaminase [Bilophila sp. 4_1_30]
Length = 308
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G DIAVHSMKDVP L + IL +RE
Sbjct: 65 EEALLSGAADIAVHSMKDVPMELPEGLILGIVPEREDPTDLFLSVDYDSLENLPAGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL EG A + A AG+K L ++
Sbjct: 125 TSSLRRQAQVLAQRPDLEVVSLRGNVDTRLRKLTEGQFAAIIMATAGMKRLGLSVPKECP 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + AV QGA+GI + K +A+ L + H TR V ER L LDG C
Sbjct: 185 LAPPAFIPAVGQGALGIEFREDRKDLAEMLSFMEHRPTRICVEAERGLLAGLDGGC 240
>gi|254784450|ref|YP_003071878.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
gi|237686105|gb|ACR13369.1| hydroxymethylbilane synthase [Teredinibacter turnerae T7901]
Length = 324
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDK-----TIL 30
E+A+I GE DIAVHSMKDVP LD I
Sbjct: 79 EQAIIAGEADIAVHSMKDVPMEFPQGLGLAVICEREDPRDALVSNKYSNLDAIPAGAVIG 138
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M + +
Sbjct: 139 TSSLRRQSQLLAMRPDLEVTFLRGNVNTRLAKLDAGEYDAIILASAGLKRLQMVDRIAEF 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + ML A QGA+GI C ++D++ L L+H T QAV+ ERA L+G C
Sbjct: 199 IAPEVMLPAGGQGAVGIECRTDDQETLALLQPLHHGVTEQAVLAERAMNRKLEGGC 254
>gi|398881553|ref|ZP_10636542.1| porphobilinogen deaminase [Pseudomonas sp. GM60]
gi|398201192|gb|EJM88079.1| porphobilinogen deaminase [Pseudomonas sp. GM60]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYTSLDELPSGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D+++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADREIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|381186502|ref|ZP_09894072.1| porphobilinogen deaminase [Flavobacterium frigoris PS1]
gi|379651346|gb|EIA09911.1| porphobilinogen deaminase [Flavobacterium frigoris PS1]
Length = 308
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 78/172 (45%), Gaps = 47/172 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYL------------------------LD-----KTILPCNL 34
A+ING++DIAVHSMKDVPT L LD TI +L
Sbjct: 67 AMINGDVDIAVHSMKDVPTVLPIGIVQAAVLERASTLDILVHKGNLDFLNESGTIASGSL 126
Query: 35 QRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPID 78
+R+ GNV R++KLNEG + A AGL+ +N+ N + +D
Sbjct: 127 RRQAQWLNKYPSHKVVDLRGNVNLRMKKLNEGDWNGAVFAAAGLERINLKPE--NFINLD 184
Query: 79 DMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A AQGA+ + ND L LN ET ER FL TL+G C
Sbjct: 185 WMIPAPAQGAMVVVAMQNDAFTRDALSQLNDIETEIVTYIERQFLKTLEGGC 236
>gi|426412170|ref|YP_007032269.1| porphobilinogen deaminase [Pseudomonas sp. UW4]
gi|426270387|gb|AFY22464.1| porphobilinogen deaminase [Pseudomonas sp. UW4]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFTSLDELPQGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADNEIHALLAPLHHQDTASRVTAERALNKHLNGGC 242
>gi|398878223|ref|ZP_10633348.1| porphobilinogen deaminase [Pseudomonas sp. GM67]
gi|398200480|gb|EJM87391.1| porphobilinogen deaminase [Pseudomonas sp. GM67]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPSGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D+++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADREIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|386726498|ref|YP_006192824.1| HemC protein [Paenibacillus mucilaginosus K02]
gi|384093623|gb|AFH65059.1| HemC protein [Paenibacillus mucilaginosus K02]
Length = 301
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL----------PCNLQREG------------- 38
E+AL++GE+D+AVHSMKD+P L + ++ C + REG
Sbjct: 55 EQALLDGEVDLAVHSMKDMPFELPEGLVVGAVPLREDPRDCLIMREGRTIDDLPQGAKVG 114
Query: 39 ------------------------NVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
N+ +RLRKL A L A AGL + ++ +++
Sbjct: 115 TSSLRRASQLQHYRPDLKIEPIRGNIDSRLRKLETEGFDAILLAAAGLHRIGWSDRISSY 174
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+ I C S++ + L HE T AV ER+FLG L+G C
Sbjct: 175 LPPELCLPAVGQGALCIECRSDNDIVLNLLSKYLHEPTAVAVAAERSFLGRLNGGC 230
>gi|398853464|ref|ZP_10610065.1| porphobilinogen deaminase [Pseudomonas sp. GM80]
gi|398239699|gb|EJN25404.1| porphobilinogen deaminase [Pseudomonas sp. GM80]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYESLEALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEERITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTQIHALLAPLHHADTSSRVTAERALNKHLNGGC 242
>gi|338533836|ref|YP_004667170.1| porphobilinogen deaminase [Myxococcus fulvus HW-1]
gi|337259932|gb|AEI66092.1| porphobilinogen deaminase [Myxococcus fulvus HW-1]
Length = 313
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G D+AVHS+KD+ + + +L +RE
Sbjct: 65 EQALLDGRADLAVHSLKDMTSVFPEGLMLAAVPEREDPRDAFCGLGGLTLDTLPQGARVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL + E + L A AGLK L + + +T +
Sbjct: 125 TSSLRRSCILRSRRPDVDIVSVRGNVQTRLARTREQGLAGALLAYAGLKRLGLEDVITQV 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QG + I C + D ++ + L L H TR AV ERA L L+G C
Sbjct: 185 LPPEVSLPAVGQGVLAIQCRTEDARVRELLAPLEHATTRIAVTAERALLAKLEGGC 240
>gi|148655885|ref|YP_001276090.1| porphobilinogen deaminase [Roseiflexus sp. RS-1]
gi|166217784|sp|A5UU37.1|HEM3_ROSS1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148567995|gb|ABQ90140.1| hydroxymethylbilane synthase [Roseiflexus sp. RS-1]
Length = 303
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL-DKTILPC---------------------------- 32
EEA+ G ID+AVHS KD+P+ L D T+ C
Sbjct: 66 EEAMRAGRIDLAVHSAKDLPSVLPPDMTLAACPRRADPRDALVAQPGMTLAALPSGARVG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLRKL EG A + A AGLK L + ++ +
Sbjct: 126 TSSLRRACQLRALRPDLTLVDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLDGAISEL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D ++ AV QG IG+ ++D+++ + L L+ + R A+ ERAFL + G C
Sbjct: 186 IEPDVLIPAVGQGVIGVEARADDEEVLRLLAPLDDQAARIAITAERAFLARIGGGC 241
>gi|167031229|ref|YP_001666460.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
gi|189028150|sp|B0KH05.1|HEM3_PSEPG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|166857717|gb|ABY96124.1| porphobilinogen deaminase [Pseudomonas putida GB-1]
Length = 313
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHADTADRVVAERALNKHLNGGC 242
>gi|259906881|ref|YP_002647237.1| porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|387869591|ref|YP_005800961.1| protein hemC [Erwinia pyrifoliae DSM 12163]
gi|224962503|emb|CAX53958.1| Porphobilinogen deaminase [Erwinia pyrifoliae Ep1/96]
gi|283476674|emb|CAY72503.1| hemC [Erwinia pyrifoliae DSM 12163]
Length = 313
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL---------------DKTI---------LP------ 31
E+A+++G DIAVHSMKDVP D + LP
Sbjct: 67 EQAMLSGSADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNRHASVDSLPQGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L +++ + +
Sbjct: 127 TSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLGLSDRIRQV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C D L +LNH+ET V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLEDMHTIGLLAALNHDETACRVSAERAMNTRLEGGC 242
>gi|403384271|ref|ZP_10926328.1| porphobilinogen deaminase [Kurthia sp. JC30]
Length = 310
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 75/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL N EID AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQALFNKEIDFAVHSMKDMPAVLPEGLVIGCIPEREDPRDAFISNGHVKFADLPQGATVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RL KL A + A AGLK L + +V T
Sbjct: 125 TSSLRRSAQLLKLRPDLNIKWIRGNVDTRLNKLETEDYDAIILAAAGLKRLGWSSDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AVAQG++GI C +D ++ L L + T + ERAFL +DG C
Sbjct: 185 YLSTDICMPAVAQGSLGIECRGDDDELLAELAKLTDKATWETAHAERAFLAAMDGGC 241
>gi|392553769|ref|ZP_10300906.1| porphobilinogen deaminase [Pseudoalteromonas spongiae
UST010723-006]
Length = 311
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP D TI LP
Sbjct: 69 EVAMMEGRADIAVHSMKDVPVEFPDGLELHTICEREDPRDAFVSNNFKSLADLPQGAIVG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L M E + +
Sbjct: 129 TSSLRRQCQLKAARPDLEIRDLRGNVNTRLAKLDAGEYDAIILAAAGLIRLEMPERIADF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L A QGA+GI C S+D+ L L H ETR V+ ERA L G C
Sbjct: 189 IAAEDSLPANGQGAVGIECRSDDETTKALLAPLEHTETRYRVLAERAMNRKLQGGC 244
>gi|398933478|ref|ZP_10665828.1| porphobilinogen deaminase [Pseudomonas sp. GM48]
gi|398160350|gb|EJM48621.1| porphobilinogen deaminase [Pseudomonas sp. GM48]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTYTSLDELPQGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|325272336|ref|ZP_08138739.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
gi|324102530|gb|EGB99973.1| porphobilinogen deaminase [Pseudomonas sp. TJI-51]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLEALPAGSVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITAT 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADHAIHALLAPLHHHDTADRVVAERAMNKRLNGGC 242
>gi|398957608|ref|ZP_10677331.1| porphobilinogen deaminase [Pseudomonas sp. GM33]
gi|398147915|gb|EJM36608.1| porphobilinogen deaminase [Pseudomonas sp. GM33]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFTSLDELPQGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTCRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|87118400|ref|ZP_01074299.1| porphobilinogen deaminase [Marinomonas sp. MED121]
gi|86166034|gb|EAQ67300.1| porphobilinogen deaminase [Marinomonas sp. MED121]
Length = 308
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G DIAVHSMKDVP + L +RE
Sbjct: 66 EHALLDGRADIAVHSMKDVPMAFPEGLGLAVICEREDPTDAFVSNKYDNLASLPQGAVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ A + A AGL L MT+ +
Sbjct: 126 TSSLRRSSQLALARPDLVIKDLRGNVNTRLRKLDNQEYDAIILATAGLMRLEMTDRIKER 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D L A QGA+GI C S+D M K L L H+ET V ERA L+G C
Sbjct: 186 ISDQDSLPAGGQGAMGIECRSDDADMIKLLAPLQHQETYYRVTAERAVNERLNGGC 241
>gi|398887660|ref|ZP_10642319.1| porphobilinogen deaminase [Pseudomonas sp. GM55]
gi|398192128|gb|EJM79297.1| porphobilinogen deaminase [Pseudomonas sp. GM55]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYTSLDELPRGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|83590097|ref|YP_430106.1| porphobilinogen deaminase [Moorella thermoacetica ATCC 39073]
gi|123766782|sp|Q2RJ26.1|HEM3_MOOTA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|83573011|gb|ABC19563.1| hydroxymethylbilane synthase [Moorella thermoacetica ATCC 39073]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E AL++G ID+AVHSMKD+PT L + + LP
Sbjct: 65 ELALLDGAIDLAVHSMKDMPTTLPEGLVIGAIGPREDPADVLVSPEGYTLATLPIKARVG 124
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL K+ + A + A AGLK LN + +
Sbjct: 125 TSSLRRKAQLAYARPDLELVDLRGNVPTRLAKMERDGLTAIVLAAAGLKRLNHGQVLGEP 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P L AV QGAIG+ + D+++A+ + ++NH T AV ERA+L L+G C
Sbjct: 185 IPYHICLPAVGQGAIGVEIRAGDRRVAELVAAINHPPTAAAVRAERAYLRALEGGC 240
>gi|121605981|ref|YP_983310.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
gi|120594950|gb|ABM38389.1| porphobilinogen deaminase [Polaromonas naphthalenivorans CJ2]
Length = 331
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G D+AVHS+KDVP L + L C L+RE
Sbjct: 74 EVALSEGRADLAVHSLKDVPMDLPEGFALACVLEREDPHDAFVSNDFASLAELPPGAVVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG QA + A AGLK L + + +
Sbjct: 134 TSSLRRLVLLKALRPDLAIQPLRGNLDTRLRKLDEGQYQAIVLAAAGLKRLGLESRIRHT 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DML A QGA+GI ++ + L +L H+ T AV ER + GSC
Sbjct: 194 FAPTDMLPAAGQGALGIEVRADRADLIAALATLAHQPTWLAVTAERTVSRAMGGSC 249
>gi|399116791|emb|CCG19600.1| porphobilinogen deaminase [Taylorella asinigenitalis 14/45]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +L++GE D+AVHS+KD+P + D + C ++RE
Sbjct: 69 ENSLLSGECDLAVHSLKDIPVEMQDHFEIACIMKRENPMDAFVSNVYKSLYDLPAGSIVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+R+L+EG+ + A AGLK L M + +
Sbjct: 129 TSSLRRESQIRAKFPDLQVMPLRGNLDTRIRRLDEGMYSGIILAAAGLKRLGMMNRIKSF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID+ L AV QGA+ I N + + L L+ EET V ER +L GSC
Sbjct: 189 LSIDESLPAVGQGALAIEILKNKYALKEMLSYLHDEETSICVTAERLVSESLGGSC 244
>gi|332304814|ref|YP_004432665.1| porphobilinogen deaminase [Glaciecola sp. 4H-3-7+YE-5]
gi|332172143|gb|AEE21397.1| porphobilinogen deaminase [Glaciecola sp. 4H-3-7+YE-5]
Length = 309
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ G DIAVHSMKDVP D L C +RE
Sbjct: 67 EIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEELPQGAVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGL LNM E +
Sbjct: 127 TSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLNMQERIKAY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ L AV QGA+GI C ++D ++ + L LNH +T V ERA L+G C
Sbjct: 187 IEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKLNGGC 242
>gi|167625822|ref|YP_001676116.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
gi|189028156|sp|B0TJ54.1|HEM3_SHEHH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|167355844|gb|ABZ78457.1| porphobilinogen deaminase [Shewanella halifaxensis HAW-EB4]
Length = 310
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G+ DIAVHSMKDVP + KTI LP
Sbjct: 67 EVAMLEGKADIAVHSMKDVPVEFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 127 TSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERIASF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C ++D ++ L L H ETR V ERA L+G C
Sbjct: 187 ISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEGGC 242
>gi|410639553|ref|ZP_11350099.1| hydroxymethylbilane synthase [Glaciecola chathamensis S18K6]
gi|410647528|ref|ZP_11357959.1| hydroxymethylbilane synthase [Glaciecola agarilytica NO2]
gi|410132949|dbj|GAC06358.1| hydroxymethylbilane synthase [Glaciecola agarilytica NO2]
gi|410140872|dbj|GAC08286.1| hydroxymethylbilane synthase [Glaciecola chathamensis S18K6]
Length = 309
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ G DIAVHSMKDVP D L C +RE
Sbjct: 67 EIAMSEGRADIAVHSMKDVPVDFPDGFGLHCICERENPYDAFVSNTYSAIEELPQGAVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGL LNM E +
Sbjct: 127 TSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLNMQERIKAY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ L AV QGA+GI C ++D ++ + L LNH +T V ERA L+G C
Sbjct: 187 IEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHADTESRVKAERAMNAKLNGGC 242
>gi|348590080|ref|YP_004874542.1| porphobilinogen deaminase [Taylorella asinigenitalis MCE3]
gi|347973984|gb|AEP36519.1| Porphobilinogen deaminase [Taylorella asinigenitalis MCE3]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +L++GE D+AVHS+KDVP + D + C ++RE
Sbjct: 69 ENSLLSGECDLAVHSLKDVPVEMQDHFEIACIMKRENPMDAFVSNVYKSLYDLPAGSIVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+R+L+EG+ + A AGLK L M + +
Sbjct: 129 TSSLRRESQIRAKFPNLQVMPLRGNLDTRIRRLDEGMYSGIILAAAGLKRLGMMNRIKSF 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID+ L AV QGA+ I N + + L L+ +ET V ER +L GSC
Sbjct: 189 LSIDESLPAVGQGALAIEILKNKYALKEMLSYLHDDETSMCVTAERLVSESLGGSC 244
>gi|398848503|ref|ZP_10605316.1| porphobilinogen deaminase [Pseudomonas sp. GM84]
gi|398248233|gb|EJN33656.1| porphobilinogen deaminase [Pseudomonas sp. GM84]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNHFASLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T
Sbjct: 127 TSSLRRQAQLLARRPDLKIHFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEQRITAT 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T VV ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHADTADRVVAERALNKRLNGGC 242
>gi|126701044|ref|YP_001089941.1| porphobilinogen deaminase [Clostridium difficile 630]
gi|122973521|sp|Q180R9.1|HEM3_CLOD6 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|115252481|emb|CAJ70324.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Clostridium
difficile 630]
Length = 301
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G+IDIAVHSMKD+P+YL + +RE
Sbjct: 64 EQQLLDGKIDIAVHSMKDMPSYLANGLKFAHTPKREDPRDVLILREGYKNLDDLPHGAVI 123
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNV+ R+RK+ + + + A +G+ N+ + +++
Sbjct: 124 GTGSKRRKFQLLKQRPDLNIVQVRGNVETRIRKIKDENMHGIVLAASGIIRANLQDKISS 183
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D ++ A AQGA+ I SND + + SL E T ++ ER FL ++GSC
Sbjct: 184 YLPVDVVIPAPAQGALAIEIRSNDSAIEGIVNSLKDENTEIQILAERGFLDGVNGSC 240
>gi|195953610|ref|YP_002121900.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
gi|195933222|gb|ACG57922.1| porphobilinogen deaminase [Hydrogenobaculum sp. Y04AAS1]
Length = 285
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 50/176 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ EID AVHS+KDVP ++ ++ L+RE
Sbjct: 62 ENALMEDEIDFAVHSLKDVPAFIPQGLVVDVFLEREDPKDAFVSKSYKTLNELPPNAKIG 121
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL+KL +G+ A + A AGLK L +++
Sbjct: 122 TSSIRRKVQLLQRRKDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGVISSY 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QG + I +++K+++ L +NHE T + ER+FL T++GSC
Sbjct: 182 L---DFIPAVGQGIVAIEYKASNKELSNILKQINHEPTYICALAERSFLETVEGSC 234
>gi|78187286|ref|YP_375329.1| porphobilinogen deaminase [Chlorobium luteolum DSM 273]
gi|123757188|sp|Q3B2Z5.1|HEM3_PELLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78167188|gb|ABB24286.1| Porphobilinogen deaminase [Chlorobium luteolum DSM 273]
Length = 313
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI EID+AVHS+KDVPT + I+ +RE
Sbjct: 66 EKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLPKNAKVA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K +EG A + A AG+ LN ++ ++ I
Sbjct: 126 TSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + ML AV QGA+GI +D++ + + +NH T ERA L L G C
Sbjct: 186 LPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQGGC 241
>gi|415884187|ref|ZP_11546216.1| porphobilinogen deaminase [Bacillus methanolicus MGA3]
gi|387591982|gb|EIJ84299.1| porphobilinogen deaminase [Bacillus methanolicus MGA3]
Length = 311
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N EID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQAMLNKEIDMAVHSMKDMPAILPEGLMIGCIPEREDHRDALISKNHIPLKELKPGARIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGL + T + VT
Sbjct: 125 TSSLRRGAQLLAKRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWTSDFVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C S+D ++ K E+T +AV ERAFL ++G C
Sbjct: 185 FLDTDVCLPAVGQGALAIECRSDDHELLKLFEKFTSEKTSRAVRAERAFLQKMEGGC 241
>gi|89900504|ref|YP_522975.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
gi|122996949|sp|Q21XQ9.1|HEM3_RHOFD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|89345241|gb|ABD69444.1| porphobilinogen deaminase [Rhodoferax ferrireducens T118]
Length = 315
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G D+AVHS+KDVP L D L C ++RE
Sbjct: 63 EVALEDGRADLAVHSLKDVPMELPDGFALACVMEREDPRDAFVSNQYANLASLPQGAVVG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL++G+ A + A AGLK L +++ +
Sbjct: 123 TSSLRRMALLRALRPDLKIEPLRGNLDTRLRKLDDGMYAAIVLAAAGLKRLGLSQRIRAT 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DML A QGA+GI S + + L L H T AV ERA + GSC
Sbjct: 183 FEPTDMLPAAGQGALGIEVRSQRQDVIDALAPLAHHTTWLAVSAERAVSRAMGGSC 238
>gi|188532369|ref|YP_001906166.1| porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
gi|238058922|sp|B2VG55.1|HEM3_ERWT9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|188027411|emb|CAO95258.1| Porphobilinogen deaminase [Erwinia tasmaniensis Et1/99]
Length = 313
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT------------------------YLLDKTILP------ 31
E+A+++G DIAVHSMKDVP + LP
Sbjct: 67 EQAMLSGSADIAVHSMKDVPVAFPPGLGLVAICEREDPHDAFVSHHYTSVDSLPQGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + + + +
Sbjct: 127 TSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLGLGDRIRQV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L +LNH ET V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDIQTIALLAALNHSETACRVSAERAMNTRLEGGC 242
>gi|78777061|ref|YP_393376.1| porphobilinogen deaminase [Sulfurimonas denitrificans DSM 1251]
gi|123727562|sp|Q30S90.1|HEM3_SULDN RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78497601|gb|ABB44141.1| hydroxymethylbilane synthase [Sulfurimonas denitrificans DSM 1251]
Length = 313
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GE IAVHS+KDVPT + D IL +RE
Sbjct: 65 EEAMLQGEAQIAVHSLKDVPTVMPDGLILAAITEREDSRDALLSEKYANIDALPKNAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG A + A AG+ L++ + V ++
Sbjct: 125 TSSLRRRMQIQKLRPDLIIKDLRGNVDTRIRKLKEGEFDAIILAAAGINRLSLLDAVKHV 184
Query: 75 LPI--DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
PI ++M+ ++ QGA+GI ND ++ + + L E +R ER+F+ L+G C
Sbjct: 185 YPISLEEMVPSMGQGALGIEAV-NDAEVLRIVAGLEDEYSRIETTIERSFVDELEGGC 241
>gi|347753008|ref|YP_004860573.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
gi|347585526|gb|AEP01793.1| porphobilinogen deaminase [Bacillus coagulans 36D1]
Length = 310
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N EID+AVHSMKDVP L D ++ C +RE
Sbjct: 65 EDAMLNHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSSLKEGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL G A + A AGLK + + + VT
Sbjct: 125 TSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWSADTVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D L A+ QGA+ + C ++D ++ L L+ ET + V ER FL ++G C
Sbjct: 185 FFDPDICLPAIGQGALAVECRADDGELLDALRKLDSAETAETVKAERVFLDKMEGGC 241
>gi|121535332|ref|ZP_01667145.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
gi|121306118|gb|EAX47047.1| porphobilinogen deaminase [Thermosinus carboxydivorans Nor1]
Length = 317
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTILP--------------- 31
E A++ GEID+AVHS+KD+PT L D I P
Sbjct: 66 ELAMLRGEIDLAVHSLKDMPTELPPGLTLAAITEREEPFDALISPKYGTLDKLPHGAKVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLRKL + A + A AGLK L + +T
Sbjct: 126 TSSLRRRAQLLNCRPDLTVCDLRGNVDTRLRKLETEELDAIVLAQAGLKRLGWDDRITQQ 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+ + S+D ++ + L+ E+T AV ER+FL L+G C
Sbjct: 186 LPPDICLPAVGQGALALETRSDDSEVLALVAFLHDEDTAAAVTAERSFLNELEGGC 241
>gi|398871214|ref|ZP_10626530.1| porphobilinogen deaminase [Pseudomonas sp. GM74]
gi|398206469|gb|EJM93232.1| porphobilinogen deaminase [Pseudomonas sp. GM74]
Length = 313
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYTSLDELPRGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S+D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSDDSEIHALLTPLHHQDTATRVTAERALNKHLNGGC 242
>gi|258626632|ref|ZP_05721462.1| porphobilinogen deaminase [Vibrio mimicus VM603]
gi|258581136|gb|EEW06055.1| porphobilinogen deaminase [Vibrio mimicus VM603]
Length = 311
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP TI LP
Sbjct: 67 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + N
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLGLESRIRNF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRLDDQRVRELLVPLNHTDTADRVRCERAMNLTLQGGC 242
>gi|50083560|ref|YP_045070.1| porphobilinogen deaminase [Acinetobacter sp. ADP1]
gi|55976395|sp|Q6FFA9.1|HEM3_ACIAD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49529536|emb|CAG67248.1| porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Acinetobacter
sp. ADP1]
Length = 311
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E AL++G D+AVHSMKDVP +L LD + LP
Sbjct: 70 EAALLDGRADLAVHSMKDVPMHLPEGLSLAVICEREDPLDAFVSNHVMSFDQLPLGARVG 129
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL++G A + A AGLK L + + +
Sbjct: 130 TSSLRRKCQILKQRPDLEIIDLRGNVGTRLAKLDDGQYDAIVLASAGLKRLGLISRIRHS 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+G+ C +NDKK+ + L H+ T V ERAF L+G C
Sbjct: 190 INAEISLPAVGQGALGLECRANDKKILDLIAPLAHQPTSACVRAERAFNAYLEGGC 245
>gi|444920233|ref|ZP_21240076.1| Porphobilinogen deaminase [Wohlfahrtiimonas chitiniclastica SH04]
gi|444508552|gb|ELV08721.1| Porphobilinogen deaminase [Wohlfahrtiimonas chitiniclastica SH04]
Length = 313
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 78/178 (43%), Gaps = 49/178 (27%)
Query: 2 EEALINGEIDIAVHSMKDVP--TYLLDKTILPCNLQRE---------------------- 37
E AL++G DIAVHSMKDVP L + I+P ++RE
Sbjct: 67 EVALLDGRADIAVHSMKDVPMAKELPEDLIVPVVMKREDPRDALVSNHNYTIKTLPQNAV 126
Query: 38 -------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
GNV RL KL+ G A + A AGLK L ++
Sbjct: 127 VGSCSLRRRVQLMALRPDLQLKDLRGNVNTRLAKLDAGEFDAIILATAGLKRLGFDHRIS 186
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D L AV QGAIGI C +++ + K + LN ++T V ERAF TL+G C
Sbjct: 187 EEISQDISLPAVGQGAIGIECNRHNEAVRKIISLLNDDDTAVCVAAERAFNSTLNGGC 244
>gi|375136791|ref|YP_004997441.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2]
gi|325124236|gb|ADY83759.1| porphobilinogen deaminase [Acinetobacter calcoaceticus PHEA-2]
Length = 309
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP L + L +RE
Sbjct: 69 EAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNRFETFADLPQGAKVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGLK L ++E + +
Sbjct: 129 TSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSERIRHC 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C + D+ + + L HEET V ERAF L+G C
Sbjct: 189 LTPDISLPAVGQGALGLECRAVDQDVLALIQPLLHEETDVCVRAERAFNAYLEGGC 244
>gi|124025263|ref|YP_001014379.1| porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
gi|158512743|sp|A2C0V4.1|HEM3_PROM1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123960331|gb|ABM75114.1| Porphobilinogen deaminase [Prochlorococcus marinus str. NATL1A]
Length = 315
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G +IAVHS+KD+PT L + IL C +RE
Sbjct: 67 EAQMLLGHAEIAVHSLKDLPTNLPEGLILGCITEREDPSDALVVNEKNQIHKLETLPEGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G + A AGL+ L +
Sbjct: 127 VVGTSSLRRLAQLRYHYPHLVFKDVRGNVITRLEKLDSGEYDCLILAAAGLQRLGFANRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C S +K+ L +L HE T + + ER+FL L+G C
Sbjct: 187 HQLIPTDISLHAVGQGALGIECVSGQQKVLDILKTLEHESTSKRCLAERSFLRELEGGC 245
>gi|346224925|ref|ZP_08846067.1| porphobilinogen deaminase [Anaerophaga thermohalophila DSM 12881]
Length = 307
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TILP-------------------------- 31
E AL+ GEIDIAVHS+KD+PT L +LP
Sbjct: 67 ENALLKGEIDIAVHSLKDLPTILPGGLTLGGVLPRGEVRDVLVSRDRRKLKDMNPGDRIG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RLRK+ EG A + A AG L + +T
Sbjct: 127 TSSLRRQAQILHYNPELKVVDIRGNVNTRLRKMYEGHCDALVMAGAGFIRLGLESEITEY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV+QGA+ + +D K+A+ + + E T Q ER FL T++G C
Sbjct: 187 LDTDIMLPAVSQGAVAMEIRDDDAKVAQIVSEITDEVTLQTTSAERTFLQTIEGGC 242
>gi|170724850|ref|YP_001758876.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
gi|238059003|sp|B1KQC6.1|HEM3_SHEWM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|169810197|gb|ACA84781.1| porphobilinogen deaminase [Shewanella woodyi ATCC 51908]
Length = 309
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ DIAVHSMKDVP + K+I LP
Sbjct: 67 EVAMLENRADIAVHSMKDVPVDFPEGLGLEIICEREDPRDAFVSNNYKSISELPKGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E +T+
Sbjct: 127 TSSLRRQCQIRAARPDLQIRDLRGNVGTRLGKLDAGTYDAIILAAAGLKRLKLEERITSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C ++D+++ L L H ETR V+ ERA L+G C
Sbjct: 187 ISAEESLPANGQGAVGIECRTDDERVKALLAPLEHAETRFRVIAERAMNTHLEGGC 242
>gi|159903036|ref|YP_001550380.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
gi|238058998|sp|A9BEB6.1|HEM3_PROM4 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|159888212|gb|ABX08426.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9211]
Length = 316
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G DIAVHS+KD+PT L + +L C +RE
Sbjct: 67 EAQMLIGRADIAVHSLKDLPTNLPEGLMLGCVTEREDPADALVVNKSLKDKQLHELPPGT 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G + A AGL L + V
Sbjct: 127 ILGTSSLRRLAQLRHHYPHLIFKDVRGNLITRLEKLDAGAYDCLILAAAGLTRLGFGDRV 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C N ++ + + SL HEET Q + ER+FL L+G C
Sbjct: 187 HQLIPCEISLHAVGQGALGIECVENKPEVLEIIKSLEHEETSQRCLSERSFLRELEGGC 245
>gi|114566228|ref|YP_753382.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318683|sp|Q0AZ43.1|HEM3_SYNWW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|114337163|gb|ABI68011.1| hydroxymethylbilane synthase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 306
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++GEIDIAVHSMKD+P+ L + L+RE
Sbjct: 65 EKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQAALIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ R+RK+ E + + A AG+K L + E +++
Sbjct: 125 TSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEEMISDY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP +L AV QG I + S+++ + K L +NH+++ A ER FL L G C
Sbjct: 185 LPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGGGC 240
>gi|428777221|ref|YP_007169008.1| hydroxymethylbilane synthase [Halothece sp. PCC 7418]
gi|428691500|gb|AFZ44794.1| hydroxymethylbilane synthase [Halothece sp. PCC 7418]
Length = 321
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+N ++D+AVHS+KD+PT L + +L C RE
Sbjct: 73 ELGLLNQDVDLAVHSLKDLPTQLPEGLMLGCVTSRENPADALVLNEKYQGYTIQTLPEGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL+KL+ G A + A+AGL+ L M + V
Sbjct: 133 VVGTSSLRRLAQLRYHYPYLEFKDVRGNLNTRLKKLDNGDYDALVLAVAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +P L AV QGA+GI C D ++ L ++ +TR + ER+FL L+G C
Sbjct: 193 SQAIPSAVSLHAVGQGALGIECREGDSRILDLLKAIEDPDTRDCTLAERSFLRELEGGC 251
>gi|384085962|ref|ZP_09997137.1| porphobilinogen deaminase [Acidithiobacillus thiooxidans ATCC
19377]
Length = 314
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY-------------------------------LLDKTIL 30
EEAL+ ++DIAVHSMKDVP D +
Sbjct: 75 EEALLARQVDIAVHSMKDVPALQPVGLEIAAIMAREDVRDAFVSNTVHHPEELAPDARVG 134
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLRKL+EG A + A+AGLK L + E +T
Sbjct: 135 SSSLRRRAQLLQKYPQVQVDDLRGNVATRLRKLDEGQYSAIILAVAGLKRLQLHERITYA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++ L AV QGA+GI ++D + L L + T Q V+ ER+ L G C
Sbjct: 195 IPVEQSLPAVGQGAVGIEIRTDDIVTRELLQPLMDQPTWQCVLAERSMNRILGGDC 250
>gi|312884198|ref|ZP_07743909.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368126|gb|EFP95667.1| porphobilinogen deaminase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 312
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT------------------------YLLDKTILP------ 31
E A++ G D+AVHSMKDVP + + LP
Sbjct: 68 ENAMLEGRADLAVHSMKDVPVDFPKGLGLVTICEREDPRDAFVSNHYQNIDALPNNAIVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 128 TCSLRRQCQIKEYRPDLIVKELRGNVGTRLNKLDAGEYDAIILAAAGLKRLGLESRIASF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D+++ L LN +T V CERA TL+G C
Sbjct: 188 LEPEQSLPAVGQGAVGIECRLDDQRLIDLLAPLNDRDTNDRVKCERAMNLTLEGGC 243
>gi|424869880|ref|ZP_18293560.1| Porphobilinogen deaminase [Leptospirillum sp. Group II 'C75']
gi|124514859|gb|EAY56370.1| Porphobilinogen deaminase [Leptospirillum rubarum]
gi|387220342|gb|EIJ75055.1| Porphobilinogen deaminase [Leptospirillum sp. Group II 'C75']
Length = 314
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ EID+AVHSMKDVP +L L L RE
Sbjct: 66 EEALLRKEIDLAVHSMKDVPAFLPPGLTLAATLTREDPRDVFLSPHYPDIKSLPQKARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RK+ EGV+ A + A AGL L V
Sbjct: 126 TSSLRRLAQIREIRNDLEFIPLRGNVGTRIRKMEEGVVDAIILAGAGLLRLGHANRVREW 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +L A+ QGA+G+ ++D+ + SL+ E T +V ER L +L+G C
Sbjct: 186 ISPRVLLPAIGQGALGLEIRTDDETTGTLVRSLSDESTHLSVAAERGVLQSLNGGC 241
>gi|398912660|ref|ZP_10656082.1| porphobilinogen deaminase [Pseudomonas sp. GM49]
gi|398181912|gb|EJM69452.1| porphobilinogen deaminase [Pseudomonas sp. GM49]
Length = 313
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPQGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|427712872|ref|YP_007061496.1| hydroxymethylbilane synthase [Synechococcus sp. PCC 6312]
gi|427377001|gb|AFY60953.1| hydroxymethylbilane synthase [Synechococcus sp. PCC 6312]
Length = 322
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +++ G+ D+AVHS+KD+PT+L D +L +RE
Sbjct: 72 EVSMLRGDTDLAVHSLKDLPTHLPDGLMLGAITEREDPADGLVVNAKFKDHQLDTLPAGS 131
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL+KL+ G + A+AGLK L +
Sbjct: 132 VIGTSSLRRLAQLRHYFPDLTFKDVRGNLNTRLQKLDAGEYDGLILAVAGLKRLGFGARI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C + D ++ + +L H T Q + ERAFL L+G C
Sbjct: 192 QQVIPPEISLHAVGQGALGIECRAADPEILGIVKTLEHYPTAQRCLAERAFLRELEGGC 250
>gi|423092997|ref|ZP_17080793.1| porphobilinogen deaminase [Pseudomonas fluorescens Q2-87]
gi|397882745|gb|EJK99232.1| porphobilinogen deaminase [Pseudomonas fluorescens Q2-87]
Length = 313
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFPSLEALPAGSVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSDIQALLAPLHHKDTATRVFAERALNKHLNGGC 242
>gi|340357277|ref|ZP_08679897.1| hydroxymethylbilane synthase [Sporosarcina newyorkensis 2681]
gi|339617912|gb|EGQ22521.1| hydroxymethylbilane synthase [Sporosarcina newyorkensis 2681]
Length = 309
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
++AL + EID AVHSMKD+P + D + C +R
Sbjct: 65 QQALFDKEIDFAVHSMKDMPAVIPDGLTVGCIPERVDPRDAYIANDHVRFMDLPIGAIVG 124
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ R+RKL +G A + A AG+K + ++ VT
Sbjct: 125 TSSLRRSSQLLMLRPDLEIKWIRGNIDTRIRKLRDGEYDAIILAAAGMKRMGWDDSTVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +DD + AV QGA+ I C +D ++ L L ++T + ER FL +DGSC
Sbjct: 185 YLALDDCIPAVGQGALAIECRQDDTELLDELAKLTDQKTWIELQAERTFLNEMDGSC 241
>gi|189346422|ref|YP_001942951.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
gi|238058917|sp|B3EIN1.1|HEM3_CHLL2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189340569|gb|ACD89972.1| porphobilinogen deaminase [Chlorobium limicola DSM 245]
Length = 313
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI EID+AVHS+KDVPT + I+ +RE
Sbjct: 66 EKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGAKLADLPLNAKVA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K +EG A + A AG+ LN ++ ++ I
Sbjct: 126 TSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLNFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + ML AV QGA+GI +D++ + + LNH T ERA L L G C
Sbjct: 186 LPHEIMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCKAERALLRHLQGGC 241
>gi|333978958|ref|YP_004516903.1| porphobilinogen deaminase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822439|gb|AEG15102.1| Porphobilinogen deaminase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 312
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL EID+AVHSMKD+PT L + I+ QRE
Sbjct: 66 ELALSAREIDLAVHSMKDLPTRLPEGLIIGAFCQREYPGDVLISRYGHTLETLPPGARIG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL E + A + A AG+ L +T +
Sbjct: 126 TSSLRRTAQLLHFRPDFNVTTIRGNLTTRLRKLEELNLDAIILAYAGIHRLGYDARITQL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D L AV QGAI I +ND +M + + L+ +R A+ ERA + L+G C
Sbjct: 186 IPFDICLPAVGQGAIAIEIRANDPEMQELIRPLDDPASRTAITAERALMRKLEGGC 241
>gi|15605804|ref|NP_213181.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
gi|2982966|gb|AAC06580.1| porphobilinogen deaminase [Aquifex aeolicus VF5]
Length = 323
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 49/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ G ID+AVHS+KDVP + L +RE
Sbjct: 82 EKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSGSVIG 141
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG+ A + A AG+K + +T +
Sbjct: 142 TSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESEITEV 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D + AV QG++ I DK++ + + LN+EE+ + ER FL L+G C
Sbjct: 202 L--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 255
>gi|385873865|gb|AFI92385.1| Porphobilinogen deaminase [Pectobacterium sp. SCC3193]
Length = 313
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGSCVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 127 TSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGAIGI C +D ++ + L LNH +T V+ ERA L+G C
Sbjct: 187 LSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTATRVLAERAMNVRLEGGC 242
>gi|220933221|ref|YP_002512120.1| Hydroxymethylbilane synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254800261|sp|B8GSU8.1|HEM3_THISH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|219994531|gb|ACL71133.1| Hydroxymethylbilane synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 316
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+ G DIAVHSMKDVP L + LP L RE
Sbjct: 67 ETGLLEGRADIAVHSMKDVPMELPEGLCLPVILDREDPRDAFVSNTFKSLDELPRDARVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + +
Sbjct: 127 TSSLRRQCQLRHDHPHFQILDLRGNVNTRLAKLDAGEFDAIILAAAGLKRLGFEVRIASE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A+ QGAIGI C ND ++ +GSL+ +T V ERA L+G C
Sbjct: 187 ITPEQSLPAIGQGAIGIECRENDPEVMALIGSLDDPDTHVRVAAERAMNARLNGGC 242
>gi|218781846|ref|YP_002433164.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
gi|218763230|gb|ACL05696.1| porphobilinogen deaminase [Desulfatibacillum alkenivorans AK-01]
Length = 310
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE+L++G D+AVHSMKDVP+ L ++RE
Sbjct: 68 EESLLDGRTDMAVHSMKDVPSEFPPGLCLAAIMEREDPRDALICSRAKGLLDLPPNAKIG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL KL + A + A AG+K + M + V+
Sbjct: 128 TSSLRRSAQLLALMPDLQIEPLRGNIGTRLDKLTSLNLDAIVLAAAGVKRMAMDDKVSEY 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + +L AV QGA+GI +D +LNHE T+ V ERAFL LDG C
Sbjct: 188 IPEETVLPAVGQGAMGIEIREDDPVAGPLARALNHEPTQVIVTGERAFLKRLDGGC 243
>gi|424810755|ref|ZP_18236096.1| porphobilinogen deaminase [Vibrio mimicus SX-4]
gi|342322127|gb|EGU17921.1| porphobilinogen deaminase [Vibrio mimicus SX-4]
Length = 311
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTI-----LP------ 31
E A++ G D+AVHSMKDVP + T LP
Sbjct: 67 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 242
>gi|449145773|ref|ZP_21776572.1| porphobilinogen deaminase [Vibrio mimicus CAIM 602]
gi|449078558|gb|EMB49493.1| porphobilinogen deaminase [Vibrio mimicus CAIM 602]
Length = 311
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTI-----LP------ 31
E A++ G D+AVHSMKDVP + T LP
Sbjct: 67 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 242
>gi|15615608|ref|NP_243912.1| porphobilinogen deaminase [Bacillus halodurans C-125]
gi|11386834|sp|Q9K8G0.1|HEM3_BACHD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|10175668|dbj|BAB06765.1| porphobilinogen deaminase [Bacillus halodurans C-125]
Length = 311
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+A+ N EIDIAVHSMKDVP+ L + L R
Sbjct: 65 EQAMANKEIDIAVHSMKDVPSVLQEGFALGATTTRVDPRDALISNEGYTLAELPAGSIVG 124
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN++ RLRKL E A + A AGL+ + + E VT
Sbjct: 125 TSSLRRSAQILAKRPDLEVKWIRGNIETRLRKLKEEDFDAIILAAAGLERMGWSNEIVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QGA+GI C ++D ++ + L ++N + T + V+ ER FL ++G C
Sbjct: 185 YLDPDLCVPAVGQGALGIECRADDDEVLEMLKTINDDTTAKTVLAERTFLHRMEGGC 241
>gi|414076258|ref|YP_006995576.1| porphobilinogen deaminase [Anabaena sp. 90]
gi|413969674|gb|AFW93763.1| porphobilinogen deaminase [Anabaena sp. 90]
Length = 335
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------------------LDKTILPCN- 33
E +IN EID AVHS+KD+PT L L LP N
Sbjct: 85 ELGMINKEIDFAVHSLKDLPTNLPEGLTLAAITERENPADAVVLHEKHKGLQIETLPANA 144
Query: 34 ------LQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
L+R GN+ R+ KL+ G A + A+AGL+ L M++ +
Sbjct: 145 VIGTSSLRRLAQLRHKFPDFTFKDVRGNLITRMAKLDAGEYDALILAVAGLERLEMSDRI 204
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+L + L AV QGA+GI C ++D ++ L ++ H +TR + ER+FL L+G C
Sbjct: 205 HQVLTPEISLHAVGQGALGIECRADDTEVISLLKAIEHPQTRDRCLAERSFLRVLEGGC 263
>gi|407682017|ref|YP_006797191.1| porphobilinogen deaminase [Alteromonas macleodii str. 'English
Channel 673']
gi|407243628|gb|AFT72814.1| porphobilinogen deaminase [Alteromonas macleodii str. 'English
Channel 673']
Length = 312
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E A++ G DIAVHSMKDVP D + LP
Sbjct: 71 EIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPQGAVVG 130
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C +++ GNV RL KL+ G A + A AGL L+M +
Sbjct: 131 TSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLDMESRIRMP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C ++D+++ K L +LNH +T V ERA L+G C
Sbjct: 191 LPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLEGGC 246
>gi|261823396|ref|YP_003261502.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
gi|261607409|gb|ACX89895.1| porphobilinogen deaminase [Pectobacterium wasabiae WPP163]
Length = 313
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGSCVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 127 TSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGAIGI C +D ++ + L LNH +T V+ ERA L+G C
Sbjct: 187 LSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGC 242
>gi|157693217|ref|YP_001487679.1| porphobilinogen deaminase [Bacillus pumilus SAFR-032]
gi|167008811|sp|A8FFV2.1|HEM3_BACP2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157681975|gb|ABV63119.1| hydroxymethylbilane synthase [Bacillus pumilus SAFR-032]
Length = 311
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N +ID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLHLHELPKGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL A + A AGL + + E V+
Sbjct: 125 TSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSKEVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+ I C +D+++ + L +E T++ V+ ERAFL +DGSC
Sbjct: 185 FLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDGSC 241
>gi|127511252|ref|YP_001092449.1| porphobilinogen deaminase [Shewanella loihica PV-4]
gi|126636547|gb|ABO22190.1| porphobilinogen deaminase [Shewanella loihica PV-4]
Length = 317
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G+ DIAVHSMKDVP + K I LP
Sbjct: 75 EVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEELPQGAIVG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + + + +
Sbjct: 135 TSSLRRQCQIRAARPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEDRIASF 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L A QGA+GI C ++D+++ L L H ETR V+ ERA L+G C
Sbjct: 195 ISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAMNTRLEGGC 250
>gi|194017264|ref|ZP_03055876.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
gi|194011132|gb|EDW20702.1| porphobilinogen deaminase [Bacillus pumilus ATCC 7061]
Length = 311
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N +ID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQAMLNHDIDMAVHSMKDMPAALPEGLVIGCIPEREDVRDALISKDHLRLHELPKGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL A + A AGL + + E V+
Sbjct: 125 TSSLRRSAQLLQERPDLNIKWIRGNIDTRLEKLKNEEYDAIILAAAGLSRMGWSKEVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+ I C +D+++ + L +E T++ V+ ERAFL +DGSC
Sbjct: 185 FLSPETCLPAVGQGALSIECRGDDEELLQLLAQFTNEYTKKTVLAERAFLKQMDGSC 241
>gi|407789713|ref|ZP_11136812.1| porphobilinogen deaminase [Gallaecimonas xiamenensis 3-C-1]
gi|407205920|gb|EKE75883.1| porphobilinogen deaminase [Gallaecimonas xiamenensis 3-C-1]
Length = 310
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LPC----- 32
E A++ G DIAVHSMKDVP LD + LP
Sbjct: 66 EVAMLEGRADIAVHSMKDVPVDFPEGLGLVTICEREDPLDAFVSNHYPNLEALPAGAVVG 125
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL++G A + A AGLK L M + +
Sbjct: 126 TSSLRRQCQLRARRPDLVVKDLRGNVNTRLAKLDDGQYDAIILACAGLKRLGMGHRIKSA 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI ND+++ L L HE TR V ERA L+G C
Sbjct: 186 LSAEQSLPAVGQGAVGIEARLNDQRILALLAPLGHEATRIRVAAERAMNSRLEGGC 241
>gi|312110034|ref|YP_003988350.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
gi|336234458|ref|YP_004587074.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311215135|gb|ADP73739.1| porphobilinogen deaminase [Geobacillus sp. Y4.1MC1]
gi|335361313|gb|AEH46993.1| porphobilinogen deaminase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 310
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++N EID+AVHSMKD+P L D I+ C RE
Sbjct: 65 EHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLPSGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL KL A + A AGL + +V T
Sbjct: 125 TSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWASDVITE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ + C +D+++ ++L LN +T +AV ERAFL L+G C
Sbjct: 185 YLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLEGGC 241
>gi|26986930|ref|NP_742355.1| porphobilinogen deaminase [Pseudomonas putida KT2440]
gi|421525168|ref|ZP_15971789.1| porphobilinogen deaminase [Pseudomonas putida LS46]
gi|38258017|sp|Q88RE5.1|HEM3_PSEPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24981540|gb|AAN65819.1|AE016210_7 porphobilinogen deaminase [Pseudomonas putida KT2440]
gi|402751631|gb|EJX12144.1| porphobilinogen deaminase [Pseudomonas putida LS46]
Length = 313
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V+ ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRLNGGC 242
>gi|423719074|ref|ZP_17693256.1| porphobilinogen deaminase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367977|gb|EID45252.1| porphobilinogen deaminase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 310
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++N EID+AVHSMKD+P L D I+ C RE
Sbjct: 65 EHAMLNNEIDMAVHSMKDMPAVLPDGLIIGCVPPREDHRDVLISKNKETFADLPSGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL KL A + A AGL + +V T
Sbjct: 125 TSSLRRSAQLLAKRPDLTIKWIRGNIDTRLAKLQTEDYDAIVLAAAGLVRMGWASDVITE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ + C +D+++ ++L LN +T +AV ERAFL L+G C
Sbjct: 185 YLATDVCLPAVGQGALAVECRESDEELREWLQKLNDIDTERAVYAERAFLRQLEGGC 241
>gi|358061102|ref|ZP_09147776.1| porphobilinogen deaminase [Staphylococcus simiae CCM 7213]
gi|357256416|gb|EHJ06790.1| porphobilinogen deaminase [Staphylococcus simiae CCM 7213]
Length = 307
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++ L + EID+A+HS+KDVP+ + L C RE
Sbjct: 65 QQELFDKEIDMAIHSLKDVPSVIPQGLTLGCIPDRELPYDAYIAKNHIPLDQLPDGSIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KLN A + A AGL+ + +++ VT
Sbjct: 125 TSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLNTEDYDAIILAAAGLRRMGWSDDIVTT 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D +L A+ QGA+GI C S+D ++ + L +++ + Q V ER FL +DGSC
Sbjct: 185 YLDRDTLLPAIGQGALGIECRSDDNELLELLSKVHNHDVAQCVTAERTFLAAMDGSC 241
>gi|262163679|ref|ZP_06031420.1| porphobilinogen deaminase [Vibrio mimicus VM223]
gi|262027895|gb|EEY46559.1| porphobilinogen deaminase [Vibrio mimicus VM223]
Length = 271
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP TI LP
Sbjct: 27 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 86
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 87 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 146
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 147 IEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 202
>gi|343497792|ref|ZP_08735848.1| porphobilinogen deaminase [Vibrio nigripulchritudo ATCC 27043]
gi|342816580|gb|EGU51476.1| porphobilinogen deaminase [Vibrio nigripulchritudo ATCC 27043]
Length = 312
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYANIDALPQGAIVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLQIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIQSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH+ T V ERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDEELIKLLEPLNHKATADRVSAERAMNLTLEGGC 243
>gi|392394297|ref|YP_006430899.1| hydroxymethylbilane synthase [Desulfitobacterium dehalogenans ATCC
51507]
gi|390525375|gb|AFM01106.1| hydroxymethylbilane synthase [Desulfitobacterium dehalogenans ATCC
51507]
Length = 327
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------LDKTILP----------- 31
E L+NGEID AVHS+KD+PT L L K P
Sbjct: 79 EVGLLNGEIDCAVHSLKDLPTVLPQGLEIAAFCEREEPRDVFLSKDGTPLAELPAGSVIG 138
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q R RKL E + + A AG+K L E +T
Sbjct: 139 TSSLRRKAQLQNYRSDLVFADLRGNLQTRWRKLQESNMAGIVLAAAGVKRLGWEERITEY 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + ML AV QGAI + S+ ++ + L LNH++T +AV ER L L+G C
Sbjct: 199 ISEEIMLSAVGQGAIAVEIASHRAEVREMLDLLNHQDTERAVKAERTLLYRLEGGC 254
>gi|148545465|ref|YP_001265567.1| porphobilinogen deaminase [Pseudomonas putida F1]
gi|395446533|ref|YP_006386786.1| porphobilinogen deaminase [Pseudomonas putida ND6]
gi|167008818|sp|A5VWX3.1|HEM3_PSEP1 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|148509523|gb|ABQ76383.1| hydroxymethylbilane synthase [Pseudomonas putida F1]
gi|388560530|gb|AFK69671.1| porphobilinogen deaminase [Pseudomonas putida ND6]
Length = 313
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLETLPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V+ ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRLNGGC 242
>gi|53802806|ref|YP_115447.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
gi|53756567|gb|AAU90858.1| porphobilinogen deaminase [Methylococcus capsulatus str. Bath]
Length = 351
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 70/176 (39%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ G DIAVHSMKDVP + L L+RE
Sbjct: 108 EQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADARIG 167
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L E +
Sbjct: 168 TSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERIAET 227
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A+ QGAIG+ C S D + L L+H T V+ ERA LDG C
Sbjct: 228 LTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGC 283
>gi|397696518|ref|YP_006534401.1| Porphobilinogen deaminase [Pseudomonas putida DOT-T1E]
gi|397333248|gb|AFO49607.1| Porphobilinogen deaminase [Pseudomonas putida DOT-T1E]
Length = 313
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V+ ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVIAERALNKRLNGGC 242
>gi|11467957|sp|O66621.2|HEM3_AQUAE RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 304
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 49/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ G ID+AVHS+KDVP + L +RE
Sbjct: 63 EKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKRENPYDVLISRSGKKLYELPSGSVIG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG+ A + A AG+K + +T +
Sbjct: 123 TSSLRRQVQIKKRRRDLKVEVLRGNVDTRMRKLKEGLYDAVILAYAGVKRMGYESEITEV 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D + AV QG++ I DK++ + + LN+EE+ + ER FL L+G C
Sbjct: 183 L--EDFIPAVGQGSLAIEIREGDKRIEELIKPLNNEESFLCAIAERTFLRRLEGGC 236
>gi|371778115|ref|ZP_09484437.1| porphobilinogen deaminase [Anaerophaga sp. HS1]
Length = 307
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKT----ILP-------------------------- 31
E AL+NGE+DIAVHS+KD+PT L + +LP
Sbjct: 67 ENALLNGEVDIAVHSLKDLPTDLPEGLRLGGVLPRGEVRDVLVSRDGRSLKELTSNDRIG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV+ RLRK+ EG+ A + A AG L + E +T
Sbjct: 127 TSSLRRQAQILHKYPYLKVVDIRGNVETRLRKMEEGLCDALVMAGAGFIRLGLEEKITEF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + +L AV+QGA+ + S+D +++ + ++ E T ERAFL T++G C
Sbjct: 187 LEPEVILPAVSQGAVAMEIRSDDSLVSEVVKAVTDEMTFLTTNAERAFLKTIEGGC 242
>gi|258623142|ref|ZP_05718154.1| porphobilinogen deaminase [Vibrio mimicus VM573]
gi|258584625|gb|EEW09362.1| porphobilinogen deaminase [Vibrio mimicus VM573]
Length = 326
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTI-----LP------ 31
E A++ G D+AVHSMKDVP + T LP
Sbjct: 82 EVAMLEGRADLAVHSMKDVPVDFPQGLGLVTICEREDPRDAFVSNTYAKIDDLPSGAVVG 141
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 142 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ + L LNH +T V CERA TL G C
Sbjct: 202 IEPEQSLPAVGQGAVGIECRLDDQRVRELLAPLNHTDTADRVRCERAMNLTLQGGC 257
>gi|50123108|ref|YP_052275.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
gi|55976381|sp|Q6CZG3.1|HEM3_ERWCT RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|49613634|emb|CAG77085.1| porphobilinogen deaminase [Pectobacterium atrosepticum SCRI1043]
Length = 313
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 127 TSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGAIGI C +D ++ + L LNH +T V+ ERA L+G C
Sbjct: 187 LSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGC 242
>gi|189184545|ref|YP_001938330.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
gi|238054423|sp|B3CUP9.1|HEM3_ORITI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|189181316|dbj|BAG41096.1| porphobilinogen deaminase [Orientia tsutsugamushi str. Ikeda]
Length = 298
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 74/177 (41%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E AL+N IDIAVHS+KDVP YL D L L+R
Sbjct: 63 EYALLNNTIDIAVHSLKDVPAYLPDGLQLAAVLERGNVGDMLVSKIANKITDLPLGARVG 122
Query: 37 ----------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNM-TENVTN 73
GNV R K+ + AT+ A AGL+ LN T N
Sbjct: 123 TSSVRRRIQLLRLRPDLNIVLFRGNVDTRWNKIFNNEVDATVLAAAGLQRLNYDTSRFCN 182
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+ D+ML A+ QG I I +DK + +NH+ T Q + ER +L TL+ C
Sbjct: 183 IISQDEMLPAIGQGVIAIEARKDDKLIMPLCAKINHQLTWQLIQVERGYLKTLNADC 239
>gi|61213332|sp|Q602K3.2|HEM3_METCA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
Length = 322
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 70/176 (39%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ G DIAVHSMKDVP + L L+RE
Sbjct: 79 EQGLLEGRADIAVHSMKDVPVEFPEGLHLAAILEREDPRDALVSHRYRSFAELPADARIG 138
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L E +
Sbjct: 139 TSSLRRQCQIKCRLPGCSLYDLRGNVNTRLAKLDAGEFDAIVLASAGLKRLGFQERIAET 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A+ QGAIG+ C S D + L L+H T V+ ERA LDG C
Sbjct: 199 LTPEQCLPAIGQGAIGVECRSTDTRTNALLVPLHHPPTAWCVLAERAMNRRLDGGC 254
>gi|406665869|ref|ZP_11073640.1| Porphobilinogen deaminase [Bacillus isronensis B3W22]
gi|405386388|gb|EKB45816.1| Porphobilinogen deaminase [Bacillus isronensis B3W22]
Length = 310
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 75/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P L I+ C RE
Sbjct: 65 EQALYDKEIDFAVHSMKDMPAVLPKGLIIGCIPPREDARDAFISNGHVKFADLPKGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GNV RL+KL A + A AGLK L + E VT
Sbjct: 125 TSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWSDEVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID L AVAQG++GI C ++D ++ + L L T ER+FL +DG C
Sbjct: 185 YLDIDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMDGGC 241
>gi|262280694|ref|ZP_06058477.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
gi|262257594|gb|EEY76329.1| porphobilinogen deaminase [Acinetobacter calcoaceticus RUH2202]
Length = 314
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP L + L +RE
Sbjct: 74 EAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G A + A AGLK L ++E + +
Sbjct: 134 TSSLRRKSQILKQRPDLQVIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSERIRHC 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C + D ++ + L HEET V ERAF L+G C
Sbjct: 194 LTPDISLPAVGQGALGLECRAADNEVLSLIQPLLHEETDVCVRAERAFNAYLEGGC 249
>gi|258514534|ref|YP_003190756.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
gi|257778239|gb|ACV62133.1| porphobilinogen deaminase [Desulfotomaculum acetoxidans DSM 771]
Length = 309
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT--------------------------YLLDK-----TIL 30
E AL++ EID+AVHSMKD+PT Y+LDK I
Sbjct: 65 EVALLSDEIDLAVHSMKDLPTDLPGGLAVGAVCEREYPGDVLVSSQGYVLDKLPEGAVIG 124
Query: 31 PCNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RLRK++E + + A AG++ L + + +T
Sbjct: 125 TSSLRRTAQLLHYRQDLRIVNIRGNLNTRLRKMDEEKLDGVVLAYAGIQRLGLKDRITER 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++ L AV QG+IGI D+++ + ++ H +R AV ER FL L+G C
Sbjct: 185 IPMEICLPAVGQGSIGIEIRHLDEEIMDIVETIEHRPSRIAVSAERNFLKRLEGGC 240
>gi|292486675|ref|YP_003529545.1| porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|292897912|ref|YP_003537281.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|428783601|ref|ZP_19001096.1| porphobilinogen deaminase [Erwinia amylovora ACW56400]
gi|291197760|emb|CBJ44855.1| porphobilinogen deaminase [Erwinia amylovora ATCC 49946]
gi|291552092|emb|CBA19129.1| Porphobilinogen deaminase [Erwinia amylovora CFBP1430]
gi|312170741|emb|CBX79003.1| Porphobilinogen deaminase [Erwinia amylovora ATCC BAA-2158]
gi|426277887|gb|EKV55610.1| porphobilinogen deaminase [Erwinia amylovora ACW56400]
Length = 313
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT------------------------YLLDKTILPC----- 32
E A+++G DIAVHSMKDVP + LP
Sbjct: 67 ENAMLSGHADIAVHSMKDVPVAFPQGLGLVAICERDDPHDAFVSNHYASVDSLPAGAIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L ++ + +
Sbjct: 127 TSSLRRQCQLSARRPDLVIHSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLGLSGRIRQV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L +LNH++T V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDMRTIGLLAALNHDDTACRVSAERAMNTRLEGGC 242
>gi|119776386|ref|YP_929126.1| porphobilinogen deaminase [Shewanella amazonensis SB2B]
gi|119768886|gb|ABM01457.1| Hydroxymethylbilane synthase [Shewanella amazonensis SB2B]
Length = 326
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + K+I LP
Sbjct: 83 EVAMLEGRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKSIDELPQGAVVG 142
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L + E +
Sbjct: 143 TSSLRRQCQLRARRPDLIIKDLRGNVGTRLAKLDSGEYDAIILAAAGLIRLKLAERIAGF 202
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C +ND+++ L L H+ETR V+ ERA L+G C
Sbjct: 203 ISTEESLPANGQGAVGIECRTNDERVKALLAPLEHKETRLRVLAERAMNTRLEGGC 258
>gi|119357593|ref|YP_912237.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
gi|158512603|sp|A1BHD6.1|HEM3_CHLPD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|119354942|gb|ABL65813.1| porphobilinogen deaminase [Chlorobium phaeobacteroides DSM 266]
Length = 313
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI EID+AVHS+KDVPT + I+ +RE
Sbjct: 66 EKHLIAKEIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISRSGETLLNLPQNARIA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K +EG A + A AG+ L ++ ++ I
Sbjct: 126 TSSLRRMSQLLSMRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVFRLKFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D ML AV QGA+GI +D++ + + LNH T ERA L L G C
Sbjct: 186 LPHDVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQGGC 241
>gi|443312856|ref|ZP_21042470.1| hydroxymethylbilane synthase [Synechocystis sp. PCC 7509]
gi|442777006|gb|ELR87285.1| hydroxymethylbilane synthase [Synechocystis sp. PCC 7509]
Length = 322
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ EID AVHS+KD+PT L +L +RE
Sbjct: 73 EVGMLQQEIDFAVHSLKDLPTNLPGGLVLGVVTERENPADAVVFHEKYRDLQIETLPPGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGL+ L M + +
Sbjct: 133 VIGTSSLRRLAQLRHHYPHLTFKDIRGNLITRLAKLDSGEFDAIILAVAGLQRLGMGDRI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL + L AV QGA+GI C S+D ++ L ++ H TR + ERAFL L+G C
Sbjct: 193 GQILKPEISLHAVGQGALGIECRSDDTEVLALLKAIEHAPTRDRTLAERAFLRELEGGC 251
>gi|260914569|ref|ZP_05921037.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
gi|260631360|gb|EEX49543.1| hydroxymethylbilane synthase [Pasteurella dagmatis ATCC 43325]
Length = 311
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E AL++GE DIAVHSMKDVP + +T+ LP
Sbjct: 67 EIALLSGEADIAVHSMKDVPMQFPEGLGLSVICPREDPHDALVSNTYRTLEELPQGAIVG 126
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L++ GNV RL KL+ G A + A AGL L +TE + +
Sbjct: 127 TSSLRRQCQLKQLRPDLKIESLRGNVGTRLSKLDCGDYDAIILAAAGLIRLGLTERIASF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ I DML A QGA+GI C ND ++ + L L ET V+ ERA L G C
Sbjct: 187 IDIQDMLPAAGQGAVGIECRKNDSRVQQLLAPLADIETTDCVLAERAMNTHLQGGC 242
>gi|334132995|ref|ZP_08506750.1| Porphobilinogen deaminase [Methyloversatilis universalis FAM5]
gi|333441905|gb|EGK69877.1| Porphobilinogen deaminase [Methyloversatilis universalis FAM5]
Length = 336
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ G D+AVHSMKDVP L D+ L ++RE
Sbjct: 94 ETALLEGRADLAVHSMKDVPMTLADEFALVATMERELPQDAFVSSRYASLDDLPPGAVVG 153
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG A + A AGLK L + + + +
Sbjct: 154 TSSLRRESQLRAQFPYLTVSSLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLGDRIRAL 213
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP++ L A QGA+GI ++ ++A +L L T V ERA L GSC
Sbjct: 214 LPVELSLPAAGQGALGIEALASRPEVAAWLSPLVCPVTEACVRAERAVSRALAGSC 269
>gi|392544073|ref|ZP_10291210.1| porphobilinogen deaminase [Pseudoalteromonas piscicida JCM 20779]
Length = 312
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E+A++ G DIAVHSMKDVP + TI LP
Sbjct: 69 EQAMLEGRADIAVHSMKDVPVDFPEGLELHTICEREDPRDAFVSNTYTSLVELPEGAVVG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L M + + +
Sbjct: 129 TSSLRRQCQIRAARPDLFIKDLRGNVNTRLAKLDAGEFDAIILAAAGLIRLEMVDRIASY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L A QGA+GI C S+D + +L L H +TR V+ ERA L+G C
Sbjct: 189 IEPEDSLPANGQGAVGIECRSDDAQTKAFLAPLEHTDTRIRVLAERAMNRRLEGGC 244
>gi|294142612|ref|YP_003558590.1| porphobilinogen deaminase [Shewanella violacea DSS12]
gi|293329081|dbj|BAJ03812.1| porphobilinogen deaminase [Shewanella violacea DSS12]
Length = 309
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A+++G DIAVHS+KDVP D K+I LP
Sbjct: 67 EIAMLDGRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIDDLPKGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E +++
Sbjct: 127 TSSLRRQCQIRAMRPDLKITDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLKLEERISSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C ++D+++ L L H ETR V ERA L G C
Sbjct: 187 ISAEESLPANGQGAVGIECRTDDERVKALLAPLEHTETRYRVTAERAMNTHLQGGC 242
>gi|407893234|ref|ZP_11152264.1| porphobilinogen deaminase [Diplorickettsia massiliensis 20B]
Length = 309
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL------------------------LDKTILP------ 31
E+AL++G+ D+AVHSMKDVP +L + LP
Sbjct: 68 EKALLSGQADLAVHSMKDVPMHLEPGLFLGAICRRDDPRDVLVALPGMTLNTLPQGACLG 127
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV+ RL K +G A + A AGL L T +
Sbjct: 128 SSSLRRPAQIHSLRPDIAVKLLRGNVETRLAKWMQGEYDAIVLAAAGLLRLQKTAFIQQY 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L I+D L A QGA+G+ C +DK++ + LNH T++ V ERA TL+G C
Sbjct: 188 LNIEDFLSAPGQGALGVECREDDKQVRALIELLNHAPTQRCVTAERALSRTLNGGC 243
>gi|194336060|ref|YP_002017854.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
gi|238058995|sp|B4SFI2.1|HEM3_PELPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|194308537|gb|ACF43237.1| porphobilinogen deaminase [Pelodictyon phaeoclathratiforme BU-1]
Length = 313
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI EID+AVHS+KDVPT D I+ +RE
Sbjct: 66 EKHLITKEIDLAVHSLKDVPTATPDGLIITSFTEREDTRDVIISKNGVKLKDLPQNAKMA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K + G A + A AG+ LN ++ ++ I
Sbjct: 126 TSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDNGEFDAMMLAYAGVFRLNFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + ML AV QGA+GI +D++ + + LNH T ERA L L G C
Sbjct: 186 LPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQGGC 241
>gi|407796099|ref|ZP_11143055.1| porphobilinogen deaminase [Salimicrobium sp. MJ3]
gi|407019453|gb|EKE32169.1| porphobilinogen deaminase [Salimicrobium sp. MJ3]
Length = 309
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL---------------------DKTILP--------- 31
E+++ + EID+AVHSMKD+P+ + D T L
Sbjct: 65 EDSMYSKEIDMAVHSMKDMPSVVTEGLSLSSVPVREDHRDAFVSKDNTTLKDLPEGAIVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
+L+R GN+ RLRKL E A + A AGLK + TE V T
Sbjct: 125 TSSLRRSAQIKAVRPDVEVKWIRGNIGTRLRKLKEEDFDAIVLAAAGLKRMGWTEEVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + A+ QGA+ I C +D ++ + L LNHE T V ER FL LDG C
Sbjct: 185 FLDPEVCVPAIGQGALAIQCRDDDDELRELLAKLNHEYTAATVSAERKFLHDLDGGC 241
>gi|425736932|ref|ZP_18855207.1| porphobilinogen deaminase [Staphylococcus massiliensis S46]
gi|425483025|gb|EKU50178.1| porphobilinogen deaminase [Staphylococcus massiliensis S46]
Length = 308
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL N EID+A+HS+KDVP+ + + L C RE
Sbjct: 65 EQALYNHEIDLAIHSLKDVPSVMPEGLTLGCIPDRENPFDAYIAIDHVPLDELKPGSIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL+KL + A + A AGLK + + VT
Sbjct: 125 TSSLRRGAQILAKYPHLEIKWIRGNIDTRLQKLQDEDYDAIILAAAGLKRMGWPSDMVTT 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ++ A+ QGA+GI C S+D ++ + L +++ + V ER FL +DGSC
Sbjct: 185 YLQPDTLIPAIGQGALGIECRSDDTELLELLQKVHNASVERCVTSERTFLKEMDGSC 241
>gi|424744826|ref|ZP_18173109.1| hydroxymethylbilane synthase [Acinetobacter baumannii WC-141]
gi|422942606|gb|EKU37653.1| hydroxymethylbilane synthase [Acinetobacter baumannii WC-141]
Length = 314
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP L + L +RE
Sbjct: 74 EAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G A + A AGLK L ++E + +
Sbjct: 134 TSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSERIRHC 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C + D+ + + L HEET V ERAF L+G C
Sbjct: 194 LTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEGGC 249
>gi|398939628|ref|ZP_10668721.1| porphobilinogen deaminase [Pseudomonas sp. GM41(2012)]
gi|398163950|gb|EJM52099.1| porphobilinogen deaminase [Pseudomonas sp. GM41(2012)]
Length = 313
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPQGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDSEIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|377579455|ref|ZP_09808423.1| porphobilinogen deaminase [Escherichia hermannii NBRC 105704]
gi|377539248|dbj|GAB53588.1| porphobilinogen deaminase [Escherichia hermannii NBRC 105704]
Length = 321
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ G DIAVHSMKDVP + L +RE
Sbjct: 75 ELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRFASLDDMPAGSIVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK LN+ +
Sbjct: 135 TSSLRRQCQIAERRPDLVIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLNLEARIGYA 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L LNH ET V ERA L+G C
Sbjct: 195 LPAEVSLPAVGQGAVGIECRLDDARTRELLAPLNHAETAIRVSAERAMNTRLEGGC 250
>gi|209693832|ref|YP_002261760.1| porphobilinogen deaminase [Aliivibrio salmonicida LFI1238]
gi|226706282|sp|B6EPK1.1|HEM3_ALISL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|208007783|emb|CAQ77905.1| porphobilinogen deaminase HemC [Aliivibrio salmonicida LFI1238]
Length = 311
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD-------------------------------KTIL 30
E A++ G D+AVHSMKDVP + T+
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVEFPEGLGLVTICERGDPRDAFVSNTYNNIDELPQGATVG 127
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL+KL++G A + A AGL L + + + +
Sbjct: 128 TCSLRRQCQLKEYRPDLIIKELRGNVGTRLQKLDDGNYDAIILACAGLIRLGLEDRIKSS 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI ND ++ L LNH ET V+CERA L+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIETRLNDDRIRALLAPLNHPETAHRVLCERAMNNRLEGGC 243
>gi|157144433|ref|YP_001451752.1| porphobilinogen deaminase [Citrobacter koseri ATCC BAA-895]
gi|157081638|gb|ABV11316.1| hypothetical protein CKO_00147 [Citrobacter koseri ATCC BAA-895]
Length = 318
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 77/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD+ LP
Sbjct: 72 EVALLEKRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNQYNNLDE--LPAGSI 129
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L +T +
Sbjct: 130 VGTSSLRRQCQLAERRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLTSRIR 189
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + L LNHEET V ERA L+G C
Sbjct: 190 TALPPEISLPAVGQGAVGIECRLDDARTQALLAPLNHEETALRVKAERAMNTRLEGGC 247
>gi|421079844|ref|ZP_15540780.1| Hydroxymethylbilane synthase [Pectobacterium wasabiae CFBP 3304]
gi|401705331|gb|EJS95518.1| Hydroxymethylbilane synthase [Pectobacterium wasabiae CFBP 3304]
Length = 313
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPEGSCVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + + + +
Sbjct: 127 TSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEDRIRSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGAIGI C +D ++ + L LNH +T V+ ERA L+G C
Sbjct: 187 LSPEASLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEGGC 242
>gi|407685902|ref|YP_006801075.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407289282|gb|AFT93594.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 312
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E A++ G DIAVHSMKDVP D + LP
Sbjct: 71 EIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPQGAVVG 130
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C +++ GNV RL KL+ G A + A AGL L M +
Sbjct: 131 TSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEMESRIRMP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C ++D+++ K L +LNH +T V ERA L+G C
Sbjct: 191 LPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLEGGC 246
>gi|337280518|ref|YP_004619990.1| Pre-uroporphyrinogen synthase [Ramlibacter tataouinensis TTB310]
gi|334731595|gb|AEG93971.1| Pre-uroporphyrinogen synthase [Ramlibacter tataouinensis TTB310]
Length = 318
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G D+AVHS+KDVP L + +L C ++RE
Sbjct: 80 EIALEEGRADLAVHSLKDVPMELPEGFLLACVMEREDPRDAFVSNRFDSLAELPQGSVVG 139
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL++G + + A AGLK L + + + +
Sbjct: 140 TSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDDGGYEGIVLAAAGLKRLGLAQRIRQV 199
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DML A QGA+GI S ++ L L H+ + AV ERA + GSC
Sbjct: 200 FEPQDMLPAAGQGALGIEIRSERAQLRAALAPLAHQPSWLAVSAERAVSRAMGGSC 255
>gi|253690341|ref|YP_003019531.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259646261|sp|C6DHC2.1|HEM3_PECCP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|251756919|gb|ACT14995.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 313
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNRYDSLEQLPEGSCVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 127 TSSLRRQCQLRARRPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEERIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGAIGI C ND ++ + L LNH T V ERA L+G C
Sbjct: 187 LSPEESLPAVGQGAIGIECRLNDDRIRQLLAPLNHPATAARVQAERAMNVRLEGGC 242
>gi|33861052|ref|NP_892613.1| porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|39931394|sp|Q7V2I1.1|HEM3_PROMP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|33639784|emb|CAE18954.1| Porphobilinogen deaminase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 316
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G DIAVHS+KD+PT L D L C +RE
Sbjct: 67 EAQMLVGHADIAVHSLKDLPTNLPDGLTLGCITKREDPSDALVVNKKNKIYQLESLPPGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L V
Sbjct: 127 IVGTSSLRRLAQLRYKFPHLDFKDIRGNVITRIEKLDSGEFDCIILAAAGLKRLGFESRV 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+DK++ K + L + + Q + ER+FL L+G C
Sbjct: 187 HQIIPNEISLHAVGQGALGIECKSDDKEVLKIISVLEDKVSSQRCLAERSFLRELEGGC 245
>gi|423204982|ref|ZP_17191538.1| porphobilinogen deaminase [Aeromonas veronii AMC34]
gi|404624803|gb|EKB21621.1| porphobilinogen deaminase [Aeromonas veronii AMC34]
Length = 315
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + KTI LP
Sbjct: 73 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKTIAELPQGAVVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 133 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 193 IEPEQSLPANGQGAVGIECRLDDTELHALLAPLEHAETRARVLTERAMNRALQGGC 248
>gi|308051395|ref|YP_003914961.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
gi|307633585|gb|ADN77887.1| porphobilinogen deaminase [Ferrimonas balearica DSM 9799]
Length = 310
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++NGE DIAVHSMKDVP + L RE
Sbjct: 67 EVAMLNGEADIAVHSMKDVPVEFPEGLGLAVICDREDPRDAFVSNTYKNLDDLPHGAIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + E +T
Sbjct: 127 SSSLRRQCQLRAMRPDLDVRDLRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERITAF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ +G LNH T V+ ERA L+G C
Sbjct: 187 IEPEQSLPANGQGAVGIECRLDDAELLALIGVLNHAPTHARVIAERAMNTHLEGGC 242
>gi|312141093|ref|YP_004008429.1| hydroxymethylbilane synthase hemc [Rhodococcus equi 103S]
gi|325674097|ref|ZP_08153787.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
gi|311890432|emb|CBH49750.1| hydroxymethylbilane synthase HemC [Rhodococcus equi 103S]
gi|325555362|gb|EGD25034.1| hydroxymethylbilane synthase [Rhodococcus equi ATCC 33707]
Length = 334
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 73/175 (41%), Gaps = 47/175 (26%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
EAL+ GE+D+AVHS KD+PT D + RE
Sbjct: 80 EALVAGEVDVAVHSYKDLPTAQPDDLTIAAVPTREDPRDALVARDGLVLGELPPGSRIGT 139
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GN+ RL K+ G + A + A AGL + TE +T L
Sbjct: 140 SAPRRRAQLRAMGLGLEIEPLRGNIDTRLGKVASGELDAIVIARAGLSRIGRTERITETL 199
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A +QGA+ + C S++ + LG L+ TR AVV ERA L L+ C
Sbjct: 200 EPVQMLPAPSQGALAVECRSDNPDLIAILGELDDHATRAAVVAERALLAELEAGC 254
>gi|406595097|ref|YP_006746227.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126]
gi|406372418|gb|AFS35673.1| porphobilinogen deaminase [Alteromonas macleodii ATCC 27126]
Length = 312
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E A++ G DIAVHSMKDVP D + LP
Sbjct: 71 EIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPQGAVVG 130
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C +++ GNV RL KL+ G A + A AGL L M +
Sbjct: 131 TSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLEMESRIRMP 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C ++D+++ K L +LNH +T V ERA L+G C
Sbjct: 191 LPADISLPAVGQGAVGIECRNDDEELIKLLQALNHTDTNTRVTAERAMNERLEGGC 246
>gi|425440065|ref|ZP_18820374.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9717]
gi|389719572|emb|CCH96607.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9717]
Length = 319
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGILDRSIDLAVHSLKDLPTKLPEGLILGCVTERVNPADALVVNSENQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|357633511|ref|ZP_09131389.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
gi|357582065|gb|EHJ47398.1| porphobilinogen deaminase [Desulfovibrio sp. FW1012B]
Length = 310
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL--------PCN-------------------- 33
EEAL++G D+AVHSMKDVP ++ PC+
Sbjct: 66 EEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGFAALPAGARVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GN+ R+ KL +G+ A + A AGL L +T
Sbjct: 126 TSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLDGLFDAIVVATAGLNRLGLTAPQAVR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A AQGA+G+ ++D + A L +H E+R AV ER FL L+G C
Sbjct: 186 LGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPESRDAVAAERGFLARLEGGC 241
>gi|157377265|ref|YP_001475865.1| porphobilinogen deaminase [Shewanella sediminis HAW-EB3]
gi|189028158|sp|A8G0W4.1|HEM3_SHESH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157319639|gb|ABV38737.1| Hydroxymethylbilane synthase [Shewanella sediminis HAW-EB3]
Length = 309
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ DIAVHSMKDVP + K I LP
Sbjct: 67 EVAMLEDRADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISELPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E +T+
Sbjct: 127 TSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLKLEERITSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C ND+++ L L H ETR V+ ERA L+G C
Sbjct: 187 ISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHLEGGC 242
>gi|238789375|ref|ZP_04633161.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
gi|238722518|gb|EEQ14172.1| Porphobilinogen deaminase [Yersinia frederiksenii ATCC 33641]
Length = 313
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTILP--------------- 31
E AL+ G DIAVHSMKDVP D + P
Sbjct: 67 ELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSPNYAHLDDLPAGSIVG 126
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ GNV RL KL+ G A + A+AGLK L + + +
Sbjct: 127 TSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLGLETRIRSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L LNH ET V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRETELRVCAERAMNTRLEGGC 242
>gi|37522781|ref|NP_926158.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
gi|55976479|sp|Q7NGF7.1|HEM3_GLOVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|35213783|dbj|BAC91153.1| porphobilinogen deaminase [Gloeobacter violaceus PCC 7421]
Length = 328
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 76/180 (42%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ D+AVHS+KD+PT L IL +RE
Sbjct: 66 ESAMLEKRTDLAVHSLKDLPTALPPGLILGAITEREDPSDAVIVRRGLEAAGLADLPEGA 125
Query: 38 ---------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN 70
GN+ RLRKL+EG A + A+AG++ L +E
Sbjct: 126 VVGTSSLRRLAQLKHHYGERLRFQDIRGNLNTRLRKLDEGRYDAIVLAVAGMRRLGWSER 185
Query: 71 VTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ +L D L AV QGA+GI C D ++ L LNH T + ERA L L+G C
Sbjct: 186 ISEVLSPDISLHAVGQGALGIECREADGEILDLLTVLNHPPTARRCRAERAMLRALEGGC 245
>gi|434403562|ref|YP_007146447.1| hydroxymethylbilane synthase [Cylindrospermum stagnale PCC 7417]
gi|428257817|gb|AFZ23767.1| hydroxymethylbilane synthase [Cylindrospermum stagnale PCC 7417]
Length = 322
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N EID AVHS+KD+PT L L +RE
Sbjct: 72 EVGMLNQEIDFAVHSLKDLPTNLPAGLTLAAITERENPADALVLHEKHKGLQIDTLPAGV 131
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ R+ KL+ G A + A+AGL+ L M+ +
Sbjct: 132 VIGTSSLRRLAQLRHHFPHFNFKDVRGNLITRMAKLDAGEYDALILAVAGLERLEMSSRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C ++D ++ L ++ H +TR + ER+FL L+G C
Sbjct: 192 HQVIPKEISLHAVGQGALGIECRADDTELINLLKAIEHPQTRDRCLAERSFLRILEGGC 250
>gi|89093768|ref|ZP_01166714.1| porphobilinogen deaminase [Neptuniibacter caesariensis]
gi|89081898|gb|EAR61124.1| porphobilinogen deaminase [Oceanospirillum sp. MED92]
Length = 313
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTILP-------------------------- 31
EEA++ GE DIAVHSMKDVP + I P
Sbjct: 66 EEAMLAGEADIAVHSMKDVPMEFPEGLGLAVICPREQPTDAFVSNTYNSIEELPEGAVVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RLRKL++G A + A AGL L M E + +
Sbjct: 126 TSSLRREAQIREKRPDLQIKWLRGNVNTRLRKLDDGEYDAIILASAGLIRLEMPERIRSE 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C ++D ++ + L L+ +ET V ERA L+G C
Sbjct: 186 ISVEFSLPAGGQGAVGIECRTDDHELLELLKPLHDQETAWRVSAERAMNRRLEGGC 241
>gi|88705502|ref|ZP_01103212.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
gi|88700015|gb|EAQ97124.1| Porphobilinogen deaminase [Congregibacter litoralis KT71]
Length = 308
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK------------------------TILPC----- 32
E AL++G IAVHSMKDVP + LP
Sbjct: 66 ETALLDGRAHIAVHSMKDVPMEFPEGLELAVICEREEPADAFVSNRYENLDALPAGAIVG 125
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RLRKL+EG A + A AGL L M E +
Sbjct: 126 TSSLRRECQLRANRPDLEVRFLRGNVNTRLRKLDEGEYDAVILACAGLIRLEMGERIRAR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+ D L A QGA+GI S+D K L L+H T + V+ ERA L G C
Sbjct: 186 IPVTDSLPAGGQGAVGIEIRSDDSATRKLLEPLHHGPTAERVLAERALNRRLQGGC 241
>gi|357015123|ref|ZP_09080122.1| HemC [Paenibacillus elgii B69]
Length = 311
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+AL++GEID+AVHSMKD+P L + + LP
Sbjct: 69 EQALLDGEIDLAVHSMKDMPFELPEGLVVGAVPLREDPRDCLITRDGRGLDDLPQGAKVG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +RLRKL A L A AGL + + ++
Sbjct: 129 TSSLRRASQLQHYRPDLHIESIRGNIDSRLRKLETEGFDAILLAAAGLHRIGWQDRISVY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+ I C +++ + L HE T AV ER+FLG L+G C
Sbjct: 189 LPPELCLPAVGQGALCIECRGDNEFVLDLLSKYKHEPTAVAVAAERSFLGRLNGGC 244
>gi|425460807|ref|ZP_18840288.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9808]
gi|440756041|ref|ZP_20935242.1| porphobilinogen deaminase [Microcystis aeruginosa TAIHU98]
gi|389826483|emb|CCI22991.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9808]
gi|440173263|gb|ELP52721.1| porphobilinogen deaminase [Microcystis aeruginosa TAIHU98]
Length = 319
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|424925580|ref|ZP_18348941.1| porphobilinogen deaminase [Pseudomonas fluorescens R124]
gi|404306740|gb|EJZ60702.1| porphobilinogen deaminase [Pseudomonas fluorescens R124]
Length = 313
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDALPAGAIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTQIHALLAPLHHADTASRVTAERALNKHLNGGC 242
>gi|425454644|ref|ZP_18834374.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9807]
gi|443669268|ref|ZP_21134502.1| porphobilinogen deaminase [Microcystis aeruginosa DIANCHI905]
gi|159026408|emb|CAO88937.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389804635|emb|CCI16203.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9807]
gi|443330463|gb|ELS45177.1| porphobilinogen deaminase [Microcystis aeruginosa DIANCHI905]
Length = 319
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSENQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|166367009|ref|YP_001659282.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
gi|166089382|dbj|BAG04090.1| porphobilinogen deaminase [Microcystis aeruginosa NIES-843]
Length = 319
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|315916992|ref|ZP_07913232.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|313690867|gb|EFS27702.1| porphobilinogen deaminase [Fusobacterium gonidiaformans ATCC 25563]
Length = 299
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY-------------------LLDKTILP----------- 31
E++L+ GEIDIAVHSMKDVP+ L+ ++ P
Sbjct: 69 EKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPLAELPQGAIIG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RLRKL E A + A AGLK + + E +T
Sbjct: 129 TSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKRVKLEEKITEY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A AQGA+ I C D ++ K L S+++E + +V ER F DG C
Sbjct: 189 LDPTIFPPAPAQGALYIQCREKDTEVQKILQSIHNENLEKVLVVEREFSKIFDGGC 244
>gi|386009850|ref|YP_005928127.1| HemC protein [Pseudomonas putida BIRD-1]
gi|313496556|gb|ADR57922.1| HemC [Pseudomonas putida BIRD-1]
Length = 313
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLDNEADIAVHSMKDVPMDFPEGLGLYCICEREDPRDAFVSNTFDSLEALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITST 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V+ ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADVEIHALLAPLHHVDTADRVMAERALNKRLNGGC 242
>gi|94987453|ref|YP_595386.1| porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
gi|442556302|ref|YP_007366127.1| porphobilinogen deaminase [Lawsonia intracellularis N343]
gi|123262097|sp|Q1MPL2.1|HEM3_LAWIP RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94731702|emb|CAJ55065.1| Porphobilinogen deaminase [Lawsonia intracellularis PHE/MN1-00]
gi|441493749|gb|AGC50443.1| porphobilinogen deaminase [Lawsonia intracellularis N343]
Length = 309
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++GE D AVHSMKDVP L + L +RE
Sbjct: 65 EEALLSGEADCAVHSMKDVPMELPFELCLAAITEREDPTDMFLSIKYSGVKSLPENALVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL A + A AG+K L + +
Sbjct: 125 TSSLRRQAQLLALRPDLQIIPLRGNIDTRLRKLMAEEFDAIIMATAGIKRLGLIAPYMSS 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP ML AV QGA+GI + + + LNH+ET + ER FL LDG C
Sbjct: 185 LPCSVMLPAVGQGALGIEVQKERQDVLELFSFLNHKETYHCIQAERDFLAGLDGGC 240
>gi|422301971|ref|ZP_16389335.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9806]
gi|389788954|emb|CCI15129.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9806]
Length = 319
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDGDAEVLQVLKVLEHAPSRDRCYAERAFLRELQGGC 249
>gi|365103543|ref|ZP_09333409.1| porphobilinogen deaminase [Citrobacter freundii 4_7_47CFAA]
gi|363645215|gb|EHL84486.1| porphobilinogen deaminase [Citrobacter freundii 4_7_47CFAA]
Length = 313
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDELPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + V
Sbjct: 127 TSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLESRVRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + L LNHEET V ERA L+G C
Sbjct: 187 LPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRLEGGC 242
>gi|421847348|ref|ZP_16280487.1| porphobilinogen deaminase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411771298|gb|EKS54999.1| porphobilinogen deaminase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|455645191|gb|EMF24255.1| porphobilinogen deaminase [Citrobacter freundii GTC 09479]
Length = 313
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDELPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + V
Sbjct: 127 TSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLESRVRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + L LNHEET V ERA L+G C
Sbjct: 187 LPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRLEGGC 242
>gi|319789486|ref|YP_004151119.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
gi|317113988|gb|ADU96478.1| porphobilinogen deaminase [Thermovibrio ammonificans HB-1]
Length = 311
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD--------------KTILPC--------------- 32
EEA++ GE+DIAVHS+KDVP+ L +L C
Sbjct: 64 EEAMLRGEVDIAVHSLKDVPSKLPKGLKLIAFSDREDPRDALLSCGRYTLETLPEGAVVG 123
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV R+RKL EG A + A AG+K L E + I
Sbjct: 124 TSSLRRKAQLRILRPDLQIKDLRGNVDTRIRKLKEGQYDAIILAAAGVKRLGWEEEIDEI 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLG-SLNHEETRQAVVCERAFLGTLDGSC 130
L + M+ +V QG +GI D ++ + + ++N E+ A ERAFL T++G C
Sbjct: 184 LSPERMIPSVCQGILGIEGREGDSEVERIVREAVNSYESEVAATVERAFLRTVEGGC 240
>gi|116750623|ref|YP_847310.1| porphobilinogen deaminase [Syntrophobacter fumaroxidans MPOB]
gi|158512355|sp|A0LN73.1|HEM3_SYNFM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|116699687|gb|ABK18875.1| hydroxymethylbilane synthase [Syntrophobacter fumaroxidans MPOB]
Length = 309
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---LDKTILP--------------------------- 31
E+AL+ +D+AVHSMKDVP L L+ +P
Sbjct: 67 EDALLARTVDLAVHSMKDVPAILPEGLEIGAIPKREDPRDVIVTRTGKGIADLPMGGRVG 126
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN++ RLRKL EG A + A AGL + VT+
Sbjct: 127 TSSLRRASQIRKLRPDIEIANLRGNIETRLRKLTEGAFDAIILAAAGLHRMGWQNRVTSY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A+ QGAIGI +D ++ + L L+ +T AV ER+ L TL+G C
Sbjct: 187 LDPADFLPAIGQGAIGIELRCDDGEVRELLAPLHDPDTHVAVEAERSLLRTLEGGC 242
>gi|425438241|ref|ZP_18818646.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9432]
gi|389676624|emb|CCH94382.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9432]
Length = 319
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDNLPEGS 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|78189475|ref|YP_379813.1| porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
gi|123757008|sp|Q3AQF5.1|HEM3_CHLCH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78171674|gb|ABB28770.1| Porphobilinogen deaminase [Chlorobium chlorochromatii CaD3]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ EID+AVHS+KDVPT + I+ +RE
Sbjct: 66 EKHLLAREIDLAVHSLKDVPTSTPEGLIITSFTEREDTRDVIISKGGVKLKDLPPNARMA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K ++G A + A AG+ LN ++ ++ I
Sbjct: 126 TSSLRRMSQLLSVRPDLDIRDIRGNLNTRFQKFDDGEFDAMMLAYAGVYRLNFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D ML AV QGA+GI +D++ + + LNH T ERA L L G C
Sbjct: 186 LPHDMMLPAVGQGALGIETRVDDEQTREIVRILNHSTTEYCCRAERALLRHLQGGC 241
>gi|237727921|ref|ZP_04558402.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
gi|226910370|gb|EEH96288.1| porphobilinogen deaminase [Citrobacter sp. 30_2]
Length = 318
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 72 EVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNSLDELPAGSIVG 131
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + V
Sbjct: 132 TSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLESRVRTA 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + L LNHEET V ERA L+G C
Sbjct: 192 LPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRLEGGC 247
>gi|113968732|ref|YP_732525.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|114049125|ref|YP_739675.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117918843|ref|YP_868035.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
gi|123131000|sp|Q0HQI7.1|HEM3_SHESR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123325438|sp|Q0HN99.1|HEM3_SHESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|158512312|sp|A0KS60.1|HEM3_SHESA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|113883416|gb|ABI37468.1| porphobilinogen deaminase [Shewanella sp. MR-4]
gi|113890567|gb|ABI44618.1| porphobilinogen deaminase [Shewanella sp. MR-7]
gi|117611175|gb|ABK46629.1| porphobilinogen deaminase [Shewanella sp. ANA-3]
Length = 310
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------------LDKTIL 30
E A++ + DIAVHSMKDVP L T+
Sbjct: 67 EVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGATVG 126
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L ++E + +
Sbjct: 127 TSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERIASF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C +ND+++ L L H ETR V+ ERA L+G C
Sbjct: 187 ISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGC 242
>gi|145220050|ref|YP_001130759.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265]
gi|189028096|sp|A4SFJ8.1|HEM3_PROVI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|145206214|gb|ABP37257.1| porphobilinogen deaminase [Chlorobium phaeovibrioides DSM 265]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI EID+AVHS+KDVPT + I+ +RE
Sbjct: 66 EKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKNGVKMLDLPKNAKVA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K +EG A + A AG+ LN ++ ++ I
Sbjct: 126 TSSLRRMSQLKSLRPDFDIKDIRGNLNTRFQKFDEGEFDAMMLAYAGVYRLNFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + ML AV QGA+GI +D++ + + +NH T ER+ L L G C
Sbjct: 186 LPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSNTEYCCKAERSLLRHLQGGC 241
>gi|225023639|ref|ZP_03712831.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
gi|224943521|gb|EEG24730.1| hypothetical protein EIKCOROL_00499 [Eikenella corrodens ATCC
23834]
Length = 312
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LPC----- 32
E+AL +G D+AVHS+KDVP L D + LP
Sbjct: 67 EQALSDGRADLAVHSIKDVPMVLPEGFALAAICERESPFDAFVSNNYQRLEDLPAGAVVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL++G A + A AGLK L +T+ + +
Sbjct: 127 TSSLRREAQLRARFPQLQVAPLRGNVQTRLAKLDQGDYAAIILAEAGLKRLGLTQRIRHT 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ ++ L LNH +T V ERA L GSC
Sbjct: 187 LSPADSLPAAGQGALGIEIAAHRSELLPLLAPLNHAQTAACVTAERALARALGGSC 242
>gi|299771850|ref|YP_003733876.1| porphobilinogen deaminase [Acinetobacter oleivorans DR1]
gi|298701938|gb|ADI92503.1| porphobilinogen deaminase [Acinetobacter oleivorans DR1]
Length = 309
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E AL++G D+AVHSMKDVP L LD + LP
Sbjct: 69 EAALLDGRADLAVHSMKDVPMALPEGLSLAVICEREDPLDAFVSNQFEKFADLPQGAKVG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL++G A + A AGLK L ++E + +
Sbjct: 129 TSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLGLSERIRHC 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C + D+ + + L HEET V ERAF L+G C
Sbjct: 189 LTPDISLPAVGQGALGLECRAADQDVLALIQPLLHEETDVCVRAERAFNAYLEGGC 244
>gi|395230310|ref|ZP_10408615.1| porphobilinogen deaminase [Citrobacter sp. A1]
gi|424730818|ref|ZP_18159411.1| porphobilinogen deaminase [Citrobacter sp. L17]
gi|394716041|gb|EJF21818.1| porphobilinogen deaminase [Citrobacter sp. A1]
gi|422894723|gb|EKU34531.1| porphobilinogen deaminase [Citrobacter sp. L17]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDELPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + V
Sbjct: 127 TSSLRRQCQLAKRRPDLVIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLGLESRVRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + L LNHEET V ERA L+G C
Sbjct: 187 LPPEVSLPAVGQGAVGIECRLDDMRTQALLAPLNHEETALRVKAERAMNTRLEGGC 242
>gi|336309757|ref|ZP_08564735.1| porphobilinogen deaminase [Shewanella sp. HN-41]
gi|335866796|gb|EGM71756.1| porphobilinogen deaminase [Shewanella sp. HN-41]
Length = 310
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------------LDKTIL 30
E A++ + DIAVHSMKDVP L T+
Sbjct: 67 EVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNLYKSISELPLGATVG 126
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L ++E + +
Sbjct: 127 TSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERIASF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C +ND+++ L L H ETR V+ ERA L+G C
Sbjct: 187 ISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGC 242
>gi|365857751|ref|ZP_09397737.1| hydroxymethylbilane synthase [Acetobacteraceae bacterium AT-5844]
gi|363715683|gb|EHL99109.1| hydroxymethylbilane synthase [Acetobacteraceae bacterium AT-5844]
Length = 447
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 77/182 (42%), Gaps = 54/182 (29%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPC------------------------------ 32
EAL++G ID AVHS+KD+ T L +L C
Sbjct: 202 EALLDGRIDFAVHSLKDLETELPPGIVLACTLKREDSRDALILGPNCAKVDPADPFSGLP 261
Query: 33 --------NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT 68
+L+R+ GNV +RL KL G ATL ALAGLK L M
Sbjct: 262 SGALVGTASLRRQAQLLHARPDLKVCMIRGNVGSRLAKLAAGEADATLLALAGLKRLEMA 321
Query: 69 ENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDG 128
E + +L + M+ A QG +G+ + D ++ + L + E R ERA L LDG
Sbjct: 322 ERASVVLDAEAMVPAAGQGIVGVTVRAADVELHELLSGIEDREARAVSRAERALLAALDG 381
Query: 129 SC 130
SC
Sbjct: 382 SC 383
>gi|238765355|ref|ZP_04626280.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
gi|238696442|gb|EEP89234.1| Porphobilinogen deaminase [Yersinia kristensenii ATCC 33638]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E A+++G DIAVHSMKDVP + TI LP
Sbjct: 67 ELAMLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSNYAHLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL++G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLGLETRIRYA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L LNH ET V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDDYTRQLLAPLNHRETELRVCAERAMNTRLEGGC 242
>gi|77461708|ref|YP_351215.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
gi|123602840|sp|Q3K4T0.1|HEM3_PSEPF RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77385711|gb|ABA77224.1| porphobilinogen deaminase [Pseudomonas fluorescens Pf0-1]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHLNGGC 242
>gi|338812564|ref|ZP_08624735.1| porphobilinogen deaminase [Acetonema longum DSM 6540]
gi|337275443|gb|EGO63909.1| porphobilinogen deaminase [Acetonema longum DSM 6540]
Length = 317
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILP---- 31
E A+++GEID+AVHS+KD+PT L LD+ LP
Sbjct: 67 ESAMLSGEIDLAVHSLKDMPTELPAGLTLAAVTERLDPGDAFVSNRYQSLDE--LPQGAK 124
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R GNV RLRKL + + A + A+AGLK L++ + +
Sbjct: 125 VGTSSLRRRAQLLACRPDLVISDLRGNVDTRLRKLEDEKLDAIVLAVAGLKRLDLGDRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP L AV QGA+ I ++D+ + L TR AV ER+FL ++G C
Sbjct: 185 QVLPRSICLPAVGQGALAIETRADDRHTVDMISCLEDAPTRLAVTAERSFLRMVEGGC 242
>gi|78778881|ref|YP_396993.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9312]
gi|123741491|sp|Q31C38.1|HEM3_PROM9 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78712380|gb|ABB49557.1| hydroxymethylbilane synthase [Prochlorococcus marinus str. MIT
9312]
Length = 316
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G+ DIAVHS+KD+PT L L C +RE
Sbjct: 67 EAQMLVGQADIAVHSLKDLPTNLPSGLKLGCITKREDPADALVVSKKNDCYKLETLPAGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L +
Sbjct: 127 IVGTSSLRRLAQLRNKYPHLNFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFESRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+DKK+ + + L + T Q + ERAFL L+G C
Sbjct: 187 HQIIPNEISLHAVGQGALGIECKSDDKKVLEIISVLEDKPTSQRCLAERAFLRELEGGC 245
>gi|398974550|ref|ZP_10685139.1| porphobilinogen deaminase [Pseudomonas sp. GM25]
gi|398141508|gb|EJM30428.1| porphobilinogen deaminase [Pseudomonas sp. GM25]
Length = 313
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYSSLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTADRVTAERALNKHLNGGC 242
>gi|319792195|ref|YP_004153835.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
gi|315594658|gb|ADU35724.1| porphobilinogen deaminase [Variovorax paradoxus EPS]
Length = 308
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ +G DIAVHS+KDVP L + +L C L+RE
Sbjct: 70 ETAIEDGRADIAVHSLKDVPMDLPEGFVLACVLEREDPRDAMVSPRYASLDELPHGAVVG 129
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG A + A AGLK L + + +
Sbjct: 130 TSSLRRVVLLKARRPDVRIEPLRGNLDTRLRKLDEGQYDAIILAAAGLKRLGLEDRIRVA 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
DDML A QGA+GI ++ + + + L L H + ERA + GSC
Sbjct: 190 FEPDDMLPAAGQGALGIEVRADREDLIELLAPLAHRGDWLSTAAERAVSRAMGGSC 245
>gi|289434836|ref|YP_003464708.1| hypothetical protein lse_1471 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171080|emb|CBH27622.1| hemC [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 309
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 54/181 (29%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------KTILPC------------------- 32
E+AL +G ID AVHSMKDVP+ + + ++ L C
Sbjct: 66 EQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDLPTAAVIG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RL+KL++ A + A AGL + EN T
Sbjct: 126 TSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWLENTT-- 183
Query: 75 LPIDDM-----LLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
L ++D+ L AV QGA+ I C NDK++ L S++HEET V ER FL L+G
Sbjct: 184 LKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKKLNGG 243
Query: 130 C 130
C
Sbjct: 244 C 244
>gi|407794790|ref|ZP_11141811.1| porphobilinogen deaminase [Idiomarina xiamenensis 10-D-4]
gi|407210726|gb|EKE80601.1| porphobilinogen deaminase [Idiomarina xiamenensis 10-D-4]
Length = 323
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKD+P TI LP
Sbjct: 68 EVAMLEGRADIAVHSMKDLPVEFPPGLELHTICQREDPRDAFVSNHYQQLRDLPEGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R GNVQ RL KL+ G A + A AGL L +++ +++
Sbjct: 128 TCSLRRRCQLQARFPHLRIKDLRGNVQTRLSKLDAGEFDAIILAAAGLIRLELSDRISDY 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++D L A QGA+GI C S+D M + L L +TR V+ ERA L+G C
Sbjct: 188 IAVEDSLPANGQGALGIECRSDDDAMKQLLAPLACADTRSCVLAERAMNRRLEGGC 243
>gi|422419157|ref|ZP_16496112.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067]
gi|313633107|gb|EFS00005.1| porphobilinogen deaminase [Listeria seeligeri FSL N1-067]
Length = 309
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 54/181 (29%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------KTILPC------------------- 32
E+AL +G ID AVHSMKDVP+ + + ++ L C
Sbjct: 66 EQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVGSFHDLPTAAVIG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RL+KL++ A + A AGL + EN T
Sbjct: 126 TSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWLENTT-- 183
Query: 75 LPIDDM-----LLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
L ++D+ L AV QGA+ I C NDK++ L S++HEET V ER FL L+G
Sbjct: 184 LKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKKLNGG 243
Query: 130 C 130
C
Sbjct: 244 C 244
>gi|24375795|ref|NP_719838.1| hydroxymethylbilane synthase HemC [Shewanella oneidensis MR-1]
gi|39931562|sp|Q8E9H0.1|HEM3_SHEON RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|24350743|gb|AAN57282.1| hydroxymethylbilane synthase HemC [Shewanella oneidensis MR-1]
Length = 310
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------------LDKTIL 30
E A++ + DIAVHSMKDVP L T+
Sbjct: 67 EVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISELPLGATVG 126
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L ++E + +
Sbjct: 127 TSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKLSERIASF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C +ND+++ L L H ETR V+ ERA L+G C
Sbjct: 187 ISAEESLPANGQGAVGIECRTNDERVKALLAPLEHLETRYRVIAERAMNTRLEGGC 242
>gi|452944418|ref|YP_007500583.1| hydroxymethylbilane synthase [Hydrogenobaculum sp. HO]
gi|452882836|gb|AGG15540.1| hydroxymethylbilane synthase [Hydrogenobaculum sp. HO]
Length = 286
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 50/176 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ EID AVHS+KDVP ++ ++ L+RE
Sbjct: 62 ENALMKDEIDFAVHSLKDVPAFIPQGLVVDIFLEREDPKDAFVSKSYKTLNELPPSAKIG 121
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL+KL +G+ A + A AGLK L +++
Sbjct: 122 TSSIRRKVQLLQKRQDLTIEDLRGNVDTRLKKLEDGLYDAIILASAGLKRLGFEGVISSY 181
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D + AV QG + I +++K+++ L +NHE T + ER+FL T++G+C
Sbjct: 182 L---DFIPAVGQGIVAIEYKASNKELSNILRQINHEPTYICALAERSFLETVEGNC 234
>gi|423315907|ref|ZP_17293812.1| porphobilinogen deaminase [Bergeyella zoohelcum ATCC 43767]
gi|405585623|gb|EKB59447.1| porphobilinogen deaminase [Bergeyella zoohelcum ATCC 43767]
Length = 304
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL++GEIDIAVHS+KDVPT + + L L+R+
Sbjct: 64 ALLHGEIDIAVHSLKDVPTQMPENLKLIAYLERDFPEDVLVRSPRAKDKPLHELKVATSS 123
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RL+KLN+G+ ATL +LAGLK L + + P+
Sbjct: 124 LRRRAFWKKEFPNAEFTDIRGNVQTRLQKLNDGLADATLFSLAGLKRLALN---IDYEPL 180
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG + IA + ++ + +NH T+ V ER FL T++G C
Sbjct: 181 PFMVSAPSQGVVTIAGHEKNVEVNTIVEKINHLPTQICVEIERTFLQTMEGGC 233
>gi|194469126|ref|ZP_03075110.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205358767|ref|ZP_02658924.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194455490|gb|EDX44329.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332052|gb|EDZ18816.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK------------------------TILPC----- 32
E AL+ DIAVHSMKDVP D +LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDVLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 242
>gi|94498044|ref|ZP_01304607.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
gi|94422479|gb|EAT07517.1| porphobilinogen deaminase [Sphingomonas sp. SKA58]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 82/174 (47%), Gaps = 46/174 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI-------LPCN------ 33
+ AL+ GE D++VHSMKDV T DK I LP N
Sbjct: 76 DRALVAGETDLSVHSMKDVETVRHDIFHIAAMLPRADPRDKLIGAASFDALPPNPIVGTS 135
Query: 34 -------LQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
++R GNV RL KL G + ATL A AGL L+ NV I+P
Sbjct: 136 SPRRGAQVKRLRPDATITLFRGNVATRLAKLAAGEVHATLLAAAGLDRLDQG-NVGTIIP 194
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+D ML A +QGA+GI + + + + + ++NH +T V+ ERA L L G+C
Sbjct: 195 VDTMLPAPSQGAVGIEILAGNAPVIEAVAAINHRDTFDTVMMERAVLRGLGGTC 248
>gi|28202885|gb|AAO35329.1| porphobilinogen deaminase [Clostridium tetani E88]
Length = 218
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 38 GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSND 97
GNVQ RLRK+ E + T+ A+AGLK LNM E +T+ ++M+ A+ QGA+GI +
Sbjct: 74 GNVQTRLRKIEEMNLAGTILAVAGLKRLNMEEVITDYFSPEEMVPAIGQGALGIEIKKYE 133
Query: 98 KKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ Y+ ++HEETR V ER+F+ L G C
Sbjct: 134 -DVIDYIKGIDHEETRICVEGERSFMEALKGDC 165
>gi|194290490|ref|YP_002006397.1| porphobilinogen deaminase [Cupriavidus taiwanensis LMG 19424]
gi|193224325|emb|CAQ70336.1| hydroxymethylbilane synthase (porphobilinogen deaminase)
[Cupriavidus taiwanensis LMG 19424]
Length = 336
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ G D+AVHS+KDVP L L ++RE
Sbjct: 82 EFAMDEGRADLAVHSLKDVPMELPPGFTLAAVMEREDPRDALVSSAYASLDEMPPGTVVG 141
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL KL+ G A + A AGLK L + + + +
Sbjct: 142 TSSLRREAALRSRYPHLVVKPLRGNLDTRLGKLDRGEYGAIILAAAGLKRLGLGDRIRAL 201
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++ L A QGA+GI S ++A++L LNH+ T AV ERA L GSC
Sbjct: 202 IPLEASLPAAGQGALGIETLSTRPELAEWLAPLNHQPTALAVTAERAVSRRLGGSC 257
>gi|157412912|ref|YP_001483778.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
gi|167008816|sp|A8G3L1.1|HEM3_PROM2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157387487|gb|ABV50192.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9215]
Length = 318
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G DIAVHS+KD+PT L + L C +RE
Sbjct: 67 EAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVSKKNDYYKLETLPEGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L +
Sbjct: 127 IVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFESRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+DKK+ + + L + T Q + ERAFL L+G C
Sbjct: 187 HQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFLRELEGGC 245
>gi|422422282|ref|ZP_16499235.1| porphobilinogen deaminase, partial [Listeria seeligeri FSL S4-171]
gi|313637685|gb|EFS03063.1| porphobilinogen deaminase [Listeria seeligeri FSL S4-171]
Length = 274
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 54/181 (29%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G ID AVHSMKDVP+ + + + +RE
Sbjct: 31 EQALSDGAIDFAVHSMKDVPSSIKEGLTIGAIPKRESALDCFVFNTVESFHDLPTAAVIG 90
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL+KL++ A + A AGL + EN T
Sbjct: 91 TSSLRRAAQILRQRPDFVIKPIRGNIDTRLQKLHDENFDAIILAKAGLSRMGWLENTT-- 148
Query: 75 LPIDDM-----LLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
L ++D+ L AV QGA+ I C NDK++ L S++HEET V ER FL L+G
Sbjct: 149 LKLEDISPELCLPAVGQGALAIECRENDKQICDMLASIHHEETGICVEAERVFLKKLNGG 208
Query: 130 C 130
C
Sbjct: 209 C 209
>gi|123965794|ref|YP_001010875.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
gi|158512730|sp|A2BVF7.1|HEM3_PROM5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123200160|gb|ABM71768.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9515]
Length = 316
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G+ DIAVHS+KD+PT L D L C +RE
Sbjct: 67 EAQMLIGKADIAVHSLKDLPTNLPDGLKLGCITKREDPSDALVVNKKNEIYQLESLPAGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L +
Sbjct: 127 IVGTSSLRRLAQLRYKFPYLNFKDIRGNVITRIEKLDSGEFDCIILAAAGLKRLGFESRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S DK++ K + L + + Q + ER+FL L+G C
Sbjct: 187 HQIIPNEISLHAVGQGALGIECKSEDKEVLKIISVLEDKASSQKCLAERSFLRELEGGC 245
>gi|428207989|ref|YP_007092342.1| hydroxymethylbilane synthase [Chroococcidiopsis thermalis PCC 7203]
gi|428009910|gb|AFY88473.1| hydroxymethylbilane synthase [Chroococcidiopsis thermalis PCC 7203]
Length = 329
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++N EID AVHS+KD+PT L + +L +RE
Sbjct: 77 EVGMLNQEIDFAVHSLKDLPTRLPEGLMLGAVTERENPADALVLHSKYKDKQFDTLPEGA 136
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL+KL+ G A + A+AGL+ L + + V
Sbjct: 137 VIGTSSLRRLAQLRYHFPHLAFKDVRGNVITRLQKLDAGEYDALVLAVAGLQRLGLGDRV 196
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D+++ + ++ TR + ERAFL L+G C
Sbjct: 197 DRVIPAEISLHAVGQGALGIECREGDEEVLSLIKAIEDVPTRDRALAERAFLRELEGGC 255
>gi|304407492|ref|ZP_07389144.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
gi|304343443|gb|EFM09285.1| porphobilinogen deaminase [Paenibacillus curdlanolyticus YK9]
Length = 325
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------LDKTILP---------------------- 31
E+AL++GEID+AVHSMKD+P L + K + P
Sbjct: 77 EQALLDGEIDLAVHSMKDMPYELPEGLMNGSVPKRVDPRDVLITADGGGFDALPNGAKVG 136
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ +RL+KL A + A AG+ + +++
Sbjct: 137 TSSLRRASQLKNRRPDIEIVSIRGNIDSRLKKLETEQFDAIVLAAAGMTRMGWENRISSP 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D + AV QGA+GI C D + L LN + AV ER+FLG L+G C
Sbjct: 197 LPVDICVPAVGQGALGIECREADSDVRYLLSLLNDPISELAVRAERSFLGALNGGC 252
>gi|393200102|ref|YP_006461944.1| porphobilinogen deaminase [Solibacillus silvestris StLB046]
gi|327439433|dbj|BAK15798.1| porphobilinogen deaminase [Solibacillus silvestris StLB046]
Length = 310
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 75/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL + EID AVHSMKD+P L + I+ C RE
Sbjct: 65 EQALYDKEIDFAVHSMKDMPAVLPEGLIIGCIPPREDARDAFISNGHVKFADLPKGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GNV RL+KL A + A AGLK L + E VT
Sbjct: 125 TSSLRRSAQLLQARPDLEIKWIRGNVDTRLKKLETEDFDAIILAAAGLKRLGWSDEVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AVAQG++GI C ++D ++ + L L T ER+FL +DG C
Sbjct: 185 YLDTDICLPAVAQGSLGIECRADDTELLEQLTKLTDATTWATAHAERSFLAAMDGGC 241
>gi|123440582|ref|YP_001004576.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332159812|ref|YP_004296389.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310829|ref|YP_006006885.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243595|ref|ZP_12870065.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420261123|ref|ZP_14763780.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433548676|ref|ZP_20504725.1| Porphobilinogen deaminase [Yersinia enterocolitica IP 10393]
gi|158512667|sp|A1JI86.1|HEM3_YERE8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|122087543|emb|CAL10324.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607646|emb|CBY29144.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664042|gb|ADZ40686.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862558|emb|CBX72712.1| porphobilinogen deaminase [Yersinia enterocolitica W22703]
gi|351776914|gb|EHB19180.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404511412|gb|EKA25290.1| porphobilinogen deaminase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431790325|emb|CCO67765.1| Porphobilinogen deaminase [Yersinia enterocolitica IP 10393]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ G DIAVHSMKDVP + TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSINYAHLDELPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL++G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDKGEYHAIILAVAGLKRLGLETRIRYA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L LNH ET V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDNFTRQLLAPLNHRETELRVCAERAMNTRLEGGC 242
>gi|399004007|ref|ZP_10706643.1| porphobilinogen deaminase [Pseudomonas sp. GM18]
gi|398120620|gb|EJM10275.1| porphobilinogen deaminase [Pseudomonas sp. GM18]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFASLDELPPGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHQDTAIRVTAERALNKHLNGGC 242
>gi|300087569|ref|YP_003758091.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527302|gb|ADJ25770.1| porphobilinogen deaminase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 301
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 72/175 (41%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL GE DIAVHS+KDVP L + IL +RE
Sbjct: 65 ESALAAGEADIAVHSLKDVPVELPPEFILAAVPEREDTRDVLISRGRKLDQLPVGAVVGS 124
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GN++ R++ + EG + A + A AGL L + + L
Sbjct: 125 DSLRRSFQIRARRPDVEVRSIRGNIETRIKAVEEGRVDAVILAAAGLHRLGLETRIDEYL 184
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P+ + L Q A+GI ND + G++NH T AV ER+FL L G C
Sbjct: 185 PLTEFLPPPGQAALGIEVRKNDDFSRETAGAVNHPPTCLAVTAERSFLRRLGGGC 239
>gi|212710180|ref|ZP_03318308.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
gi|212687179|gb|EEB46707.1| hypothetical protein PROVALCAL_01234 [Providencia alcalifaciens DSM
30120]
Length = 314
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT------------------------YLLDKTILPC----- 32
E AL+ G DIAVHSMKDVP + + LP
Sbjct: 68 ELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDALPAGSIVG 127
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 128 TSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERIKTA 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C ND++ L LNH+ T V+ ERA L+G C
Sbjct: 188 LEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLEGGC 243
>gi|157960202|ref|YP_001500236.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
gi|189028157|sp|A8GZG4.1|HEM3_SHEPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|157845202|gb|ABV85701.1| porphobilinogen deaminase [Shewanella pealeana ATCC 700345]
Length = 310
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + KTI LP
Sbjct: 67 EVAMLEGLADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNTYKTIEDLPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 127 TSSLRRQCQIRAARPDLVIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKRLKLEERIASF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C ++D ++ L L H ETR V ERA L+G C
Sbjct: 187 ISAEQSLPANGQGAVGIECRTDDARVKALLAPLEHAETRMRVTAERAMNTRLEGGC 242
>gi|428217255|ref|YP_007101720.1| hydroxymethylbilane synthase [Pseudanabaena sp. PCC 7367]
gi|427989037|gb|AFY69292.1| hydroxymethylbilane synthase [Pseudanabaena sp. PCC 7367]
Length = 317
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+I E+D AVHS+KD+PT L + +L +RE
Sbjct: 68 ELAMIEREVDFAVHSLKDLPTNLPEGLMLGVVTEREDPADALVVHEKHKDKKLETLPEGT 127
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGLK L+M++ +
Sbjct: 128 IVGTSSLRRLAQLRHHFPHLTFKDIRGNLNTRLAKLDAGEYDAIILAVAGLKRLDMSDRI 187
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ + L AV QGA+GI C + D+++ L ++ H T Q + ER+FL L+G C
Sbjct: 188 HQVIDPEISLHAVGQGALGIECRTGDEEVLGLLSTIAHYPTTQRCLAERSFLRELEGGC 246
>gi|398992587|ref|ZP_10695551.1| porphobilinogen deaminase [Pseudomonas sp. GM21]
gi|398136596|gb|EJM25677.1| porphobilinogen deaminase [Pseudomonas sp. GM21]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPKGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILASAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C + D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRTADSEIHALLAPLHHQDTATRVTAERALNKHLNGGC 242
>gi|126695860|ref|YP_001090746.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
gi|158513419|sp|A3PBM0.1|HEM3_PROM0 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|126542903|gb|ABO17145.1| Porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9301]
Length = 316
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G DIAVHS+KD+PT L + L C +RE
Sbjct: 67 EAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLETLPEGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L +
Sbjct: 127 IVGTSSLRRLAQLRNKYPHLIFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFESRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+DKK+ + + L + T Q + ERAFL L+G C
Sbjct: 187 HQIIPSEISLHAVGQGALGIECKSDDKKVLEIINILEDKPTSQRCLAERAFLRELEGGC 245
>gi|422019070|ref|ZP_16365620.1| porphobilinogen deaminase [Providencia alcalifaciens Dmel2]
gi|414103612|gb|EKT65186.1| porphobilinogen deaminase [Providencia alcalifaciens Dmel2]
Length = 314
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT------------------------YLLDKTILPC----- 32
E AL+ G DIAVHSMKDVP + + LP
Sbjct: 68 ELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDALPAGSIVG 127
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 128 TSSLRRQCQLRELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERIKTA 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C ND++ L LNH+ T V+ ERA L+G C
Sbjct: 188 LEPEQSLPAVGQGAVGIECRLNDQRTRDLLAKLNHDATSICVLAERAMNMRLEGGC 243
>gi|427734888|ref|YP_007054432.1| hydroxymethylbilane synthase [Rivularia sp. PCC 7116]
gi|427369929|gb|AFY53885.1| hydroxymethylbilane synthase [Rivularia sp. PCC 7116]
Length = 323
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 83/180 (46%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------LDKTI--LP--- 31
E ++N EID AVHS+KD+PT L DK I LP
Sbjct: 73 ELGMMNREIDFAVHSLKDLPTRLPEGLGLAAISERENPADALVVHEKHKDKQIETLPKGA 132
Query: 32 ----CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
+L+R GN+ RL KL+ G A + A AGL L M E +
Sbjct: 133 VIGTSSLRRLAQLRHHFPHFEFKDVRGNLNTRLAKLDSGEYDALILAAAGLGRLGMAERI 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLG-SLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C S+++++ L ++ H +TR + ERAFL L+G C
Sbjct: 193 HQVIPKEISLHAVGQGALGIECLSDNEQLISLLKEAIEHPQTRDRCLAERAFLRDLEGGC 252
>gi|85711585|ref|ZP_01042643.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
gi|85694737|gb|EAQ32677.1| Porphobilinogen deaminase [Idiomarina baltica OS145]
Length = 310
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G D+AVHSMKD+P TI LP
Sbjct: 66 EAAMLEGRADLAVHSMKDLPVEFPPGLELHTICESEDPRDAFVSNHYQSLNELPEGAVVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R GNVQ RLRKL+EG A + A +GL L + E +T+
Sbjct: 126 TCSLRRRCQVKERFPHLIINDLRGNVQTRLRKLDEGQFDAIILAASGLIRLELGERITSF 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++D L A QG +GI S+D ++ L L TR V+ ERA L G C
Sbjct: 186 IPVEDSLPANGQGVLGIEVRSDDDEIKALLEPLQCPTTRFRVLAERAMNRRLQGGC 241
>gi|401677004|ref|ZP_10808984.1| hydroxymethylbilane synthase [Enterobacter sp. SST3]
gi|400215758|gb|EJO46664.1| hydroxymethylbilane synthase [Enterobacter sp. SST3]
Length = 320
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP + TI LP
Sbjct: 74 ELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYDSLDALPAGSVVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 134 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLEERIRVA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 194 LPPELSLPAVGQGAVGIECRLDDARTRELLAPLNHEETATRVKAERAMNTRLEGGC 249
>gi|254418576|ref|ZP_05032300.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
gi|196184753|gb|EDX79729.1| porphobilinogen deaminase [Brevundimonas sp. BAL3]
Length = 317
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPT-------------------YLLDKTI-----LP------ 31
EEAL++ IDIA+HSMKDVP + + LP
Sbjct: 72 EEALLDRRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFISRDFDSFDQLPFGARLG 131
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RLR+ EG A L A++G+ L +TE++
Sbjct: 132 TASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLGVTEHIREK 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D L A QGA+ I ++D A ++ +LNH ET AV ER + L+GSC
Sbjct: 192 LSLDAFLPAPGQGALAIQTRADDID-APWVAALNHPETAVAVAAERGAMTALEGSC 246
>gi|398965336|ref|ZP_10680929.1| porphobilinogen deaminase [Pseudomonas sp. GM30]
gi|398147248|gb|EJM35962.1| porphobilinogen deaminase [Pseudomonas sp. GM30]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYQSLDALPAGAIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTPIHALLAPLHHADTASRVTAERALNKHLNGGC 242
>gi|294670387|ref|ZP_06735269.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307851|gb|EFE49094.1| hypothetical protein NEIELOOT_02105 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 312
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 68 EQALQDGRADLAVHSIKDVPMELPEGFALAAIGERASPFDAFVSNQYARLEEMPEGAIVG 127
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + + I
Sbjct: 128 TSSLRREAQLRAKFPHLTIQPLRGNVQTRLSKLDNGDYDAVILAAAGLQRLGLDSRIREI 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI + +A L LNHEET V ERA L GSC
Sbjct: 188 LSPADSLPAAGQGALGIEIAARRTDLADILRPLNHEETAACVTAERALARALGGSC 243
>gi|227325802|ref|ZP_03829826.1| porphobilinogen deaminase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLEQLPEGSCVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 127 TSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLEERIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGAIGI C +D+ + + L LNH T V+ ERA L+G C
Sbjct: 187 LSPEESLPAVGQGAIGIECRLDDEHVRQLLAPLNHPATAARVLAERAMNVRLEGGC 242
>gi|339007530|ref|ZP_08640104.1| porphobilinogen deaminase [Brevibacillus laterosporus LMG 15441]
gi|338774733|gb|EGP34262.1| porphobilinogen deaminase [Brevibacillus laterosporus LMG 15441]
Length = 313
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E++L+ + D+AVHS+KD+P L + + +RE
Sbjct: 65 EQSLLEEQTDMAVHSLKDMPAVLPEGLTIGAIPKREDPRDVLISKDGKTLDELKQGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+RKL E A + A AGLK + +T
Sbjct: 125 TSSLRRSSQLLHYRPDLIIKPIRGNIDTRIRKLEEEDFDAIILAAAGLKRVEWKGTITQY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+ I C ++D +M L +H ETR AV ERAFL ++GSC
Sbjct: 185 LDPQISLPAVGQGALAIECRTHDAEMMSLLQRFDHLETRYAVEAERAFLHKMEGSC 240
>gi|293610070|ref|ZP_06692371.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827302|gb|EFF85666.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 314
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP L + L +RE
Sbjct: 74 EAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGLK L ++E + +
Sbjct: 134 TSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSERIRHC 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C + D+ + + L H ET V ERAF L+G C
Sbjct: 194 LTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEGGC 249
>gi|410619026|ref|ZP_11329944.1| hydroxymethylbilane synthase [Glaciecola polaris LMG 21857]
gi|410161441|dbj|GAC34082.1| hydroxymethylbilane synthase [Glaciecola polaris LMG 21857]
Length = 309
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 70/176 (39%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+ G DIAVHSMKDVP + L C +RE
Sbjct: 67 EVAMSEGRADIAVHSMKDVPVDFPEGFGLHCICERENPYDAFVSNTYASIEDLPQGAVVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGL L M E +
Sbjct: 127 TSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLDEGQYDAIILAAAGLIRLEMRERIKTY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ L AV QGA+GI C +D ++ L LNH +T V ERA LDG C
Sbjct: 187 IEPTVSLPAVGQGAVGIECRDDDAELIALLQPLNHADTESRVKAERAMNAKLDGGC 242
>gi|427426045|ref|ZP_18916116.1| hydroxymethylbilane synthase [Acinetobacter baumannii WC-136]
gi|425697188|gb|EKU66873.1| hydroxymethylbilane synthase [Acinetobacter baumannii WC-136]
Length = 309
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP L + L +RE
Sbjct: 69 EAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFADLPQGAKVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+EG A + A AGLK L ++E + +
Sbjct: 129 TSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDEGQYDAIILASAGLKRLGLSERIRHC 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+G+ C + D+ + + L H ET V ERAF L+G C
Sbjct: 189 LTPDISLPAVGQGALGLECRAADQDVLALIQPLLHAETDVCVRAERAFNAYLEGGC 244
>gi|333985755|ref|YP_004514965.1| porphobilinogen deaminase [Methylomonas methanica MC09]
gi|333809796|gb|AEG02466.1| Porphobilinogen deaminase [Methylomonas methanica MC09]
Length = 308
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ G DIAVHSMKDVP D L + RE
Sbjct: 67 EQGLLEGTADIAVHSMKDVPVEFPDGLHLAVIMNREDPTDAFVSNRYGSLADLPANARIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L M E +T
Sbjct: 127 TSSLRRQCQIKEKFPHAEILSLRGNVNTRLAKLDAGEYDAIILASAGLKRLGMGERITAQ 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L A+ QGAIGI C +D + YL L+ E T V ERA L+G C
Sbjct: 187 LSPEESLPAMGQGAIGIECRIDDADIHDYLKVLHDEATSIRVGAERAMNARLNGGC 242
>gi|155967344|gb|ABU41508.1| HemC [Heliophilum fasciatum]
Length = 315
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD-------------KTIL------------------ 30
E A++ GE+D+AVHS+KD+PT L + + +L
Sbjct: 69 EVAMLEGEVDMAVHSLKDLPTQLPEGLTVGAMCIREDYRDVLIGRTARTLAELKPGARVG 128
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q R+RK+ E + + A AG+ L + +T
Sbjct: 129 TASLRRKSQIWKVRPDLELLDIRGNLQTRMRKMEEQDLDGIILAAAGVLRLGWADKITQY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D L AV QG++GI D+ +A+ +G+LNH++T + ERA + TL+G C
Sbjct: 189 IDEDVCLPAVGQGSVGIEIRDGDEAIARVVGALNHKDTADCITAERALMRTLEGGC 244
>gi|78044433|ref|YP_360051.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756773|sp|Q3ACT3.1|HEM3_CARHZ RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|77996548|gb|ABB15447.1| porphobilinogen deaminase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 311
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT---------------YLLDKTILP--------------- 31
E AL+N ID+AVHSMKD+PT Y D I P
Sbjct: 66 EHALLNKTIDMAVHSMKDLPTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELPQGARIG 125
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ R RK+ E + + A AG+K L + +T +
Sbjct: 126 TSSLRRIAQILAVRPDLQAIPLRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYEDKITEM 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QG+IG+ ++D + + L ++H T +A+ ERAFL L+G C
Sbjct: 186 LSFDLCLPAVGQGSIGVEIRADDTFIEELLKPIDHFATNRAIRAERAFLKRLEGGC 241
>gi|170769870|ref|ZP_02904323.1| porphobilinogen deaminase [Escherichia albertii TW07627]
gi|170121308|gb|EDS90239.1| porphobilinogen deaminase [Escherichia albertii TW07627]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 78/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TY-LLDKTILPC--- 32
E AL+ DIAVHSMKDVP TY LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ND + + L +LNH ET V ERA L+G C
Sbjct: 185 TALPPEVSLPAVGQGAVGIECRLNDTRTRELLAALNHNETALRVTAERAMNTRLEGGC 242
>gi|429102794|ref|ZP_19164768.1| Porphobilinogen deaminase [Cronobacter turicensis 564]
gi|426289443|emb|CCJ90881.1| Porphobilinogen deaminase [Cronobacter turicensis 564]
Length = 291
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 45 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDEMPAGSIVG 104
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 105 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSA 164
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 165 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 220
>gi|238784737|ref|ZP_04628740.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
gi|238714333|gb|EEQ06342.1| Porphobilinogen deaminase [Yersinia bercovieri ATCC 43970]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL++G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLDGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSSYAHLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGL L + +
Sbjct: 127 TSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLNRLGLETRIRYA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+++ L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 MPVEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVCAERAMNTRLEGGC 242
>gi|328768210|gb|EGF78257.1| hypothetical protein BATDEDRAFT_17445 [Batrachochytrium
dendrobatidis JAM81]
Length = 342
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 52/181 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL + +D VHS+KD+PT L ++ L+RE
Sbjct: 81 EMALDDHSVDFVVHSLKDLPTQLPSGMMVGAILEREQPNDVVIMSLKHSFTGLAQLPAGS 140
Query: 38 --------------------------GNVQARLRKLNEGV--IQATLSALAGLKCLNMTE 69
GN+ RL+KL++ A L A AG+ + T+
Sbjct: 141 IIGTSSVRRSAQLKRRFPNLVFQDIRGNLNTRLKKLDDPASPFAAILLAYAGIHRMGWTD 200
Query: 70 NVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
+T ILP +L AV QGAIGI C ND + L LNH TR ER+F+ +L+G
Sbjct: 201 RITEILPTVTILHAVGQGAIGIECRENDTCVRSLLAPLNHTPTRIRCTAERSFMRSLEGG 260
Query: 130 C 130
C
Sbjct: 261 C 261
>gi|317052496|ref|YP_004113612.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
gi|316947580|gb|ADU67056.1| porphobilinogen deaminase [Desulfurispirillum indicum S5]
Length = 308
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 49/178 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL---------------------------------DKT 28
E LI+G IDIAVHSMKDVPT D T
Sbjct: 64 ENELIDGTIDIAVHSMKDVPTEFPEGLELFAITEREDPRDAFISRNGKSMAELGQQKDVT 123
Query: 29 ILPCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
I +L+R+ GNVQ RL+++ E + + A AG+K L + V
Sbjct: 124 IGTSSLRRQAQLLTLYPHWNIVSIRGNVQTRLKRMEERQMDGIILAAAGMKRLELEHLVK 183
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + M+ A+ QGA+G+ S D + + L L H T Q V+ ERA L T++G C
Sbjct: 184 EYIAPEVMIPAIGQGALGLEVRSADTALKERLEFLRHPVTTQCVLAERALLRTMEGGC 241
>gi|320529107|ref|ZP_08030199.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
gi|320138737|gb|EFW30627.1| porphobilinogen deaminase [Selenomonas artemidis F0399]
Length = 311
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LPC----- 32
E+A++ G+IDIAVHS+KD+PT + I LP
Sbjct: 67 EQAMLAGDIDIAVHSLKDMPTEIPAGLIIGAITARLDPGDAFVSNQYAAIEELPAGARVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RL KL+ G A + A AGL+ L + + + ++
Sbjct: 127 TSSLRRRAQLLAVRPDLVLLDLRGNVNTRLEKLDAGEFDAVVLAAAGLRRLGLGDRIRSV 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP ML AV QGA+ I C ++D ++ +G + + A ERAFLG ++G C
Sbjct: 187 LPRAMMLPAVGQGALAIECRADDAEICAAIGFMCDADMTAAAAAERAFLGRVEGGC 242
>gi|283834568|ref|ZP_06354309.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
gi|291069698|gb|EFE07807.1| hydroxymethylbilane synthase [Citrobacter youngae ATCC 29220]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EVALLEKRADIAVHSMKDVPVEFPDGLGLVTICEREDPRDAFVSNKYNTLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + V
Sbjct: 127 TSSLRRQCQLAKRRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRVRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + L LNHEET V ERA L+G C
Sbjct: 187 LPPEVSLPAVGQGAVGIECRLDDMRTRALLAPLNHEETALRVKAERAMNTRLEGGC 242
>gi|354595764|ref|ZP_09013781.1| Porphobilinogen deaminase [Brenneria sp. EniD312]
gi|353673699|gb|EHD19732.1| Porphobilinogen deaminase [Brenneria sp. EniD312]
Length = 323
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LPC----- 32
E AL+ G DIAVHSMKDVP + TI LP
Sbjct: 77 ELALLEGRADIAVHSMKDVPAEFPEGLGLATICERDDPRDAFVSNRYAGLEQLPAGSRVG 136
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL +L+ G A + A+AGLK L + E +
Sbjct: 137 TSSLRRQCQLRAGRPDLIIGNLRGNVGTRLARLDAGEYDAIILAVAGLKRLKLEERIRCP 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGAIGI C +DK+ + L LNH +T V+ ERA L+G C
Sbjct: 197 LSPETSLPAVGQGAIGIECRLDDKRTRRLLAPLNHADTASRVLAERAMNLRLEGGC 252
>gi|193212401|ref|YP_001998354.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
gi|209572771|sp|P28464.4|HEM3_CHLP8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|193085878|gb|ACF11154.1| porphobilinogen deaminase [Chlorobaculum parvum NCIB 8327]
Length = 312
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ GEID+AVHS+KDVPT + ++ +RE
Sbjct: 66 EKHLLAGEIDLAVHSLKDVPTGTPEGLVITSFTEREDTRDVIISKSGKGLMDLPQNAKMA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K +EG A + A AG+ L ++ +T I
Sbjct: 126 TSSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + ML AV QGA+GI ++D + + + LN + T ERA L L G C
Sbjct: 186 LPHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQGGC 241
>gi|409399094|ref|ZP_11249461.1| porphobilinogen deaminase [Acidocella sp. MX-AZ02]
gi|409131690|gb|EKN01380.1| porphobilinogen deaminase [Acidocella sp. MX-AZ02]
Length = 330
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 53/181 (29%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
E L+ G ID AVHS+KD+ T L D L C L+RE
Sbjct: 86 EQLLAGSIDFAVHSLKDLETTLPDGIALACTLKREDARDALILPPGTQIDPADPFGALKQ 145
Query: 38 ----------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTE 69
GNV RL K+ G + ATL A AGL+ L + E
Sbjct: 146 GALVGSASVRRQSQLKYARPDLNFTLLRGNVGTRLGKVEGGELDATLLAYAGLRRLGLAE 205
Query: 70 NVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
+ +L + M+ A QG +GI S D+++ L + E R ERA L LDGS
Sbjct: 206 KASVLLSPEQMVPAACQGIVGITVRSADEELLALLAGIEDAEARAVSRAERALLAALDGS 265
Query: 130 C 130
C
Sbjct: 266 C 266
>gi|260596029|ref|YP_003208600.1| porphobilinogen deaminase [Cronobacter turicensis z3032]
gi|260215206|emb|CBA27057.1| Porphobilinogen deaminase [Cronobacter turicensis z3032]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYKSLDEMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 187 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 242
>gi|429107070|ref|ZP_19168939.1| Porphobilinogen deaminase [Cronobacter malonaticus 681]
gi|426293793|emb|CCJ95052.1| Porphobilinogen deaminase [Cronobacter malonaticus 681]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSGQYKSLDEMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 187 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 242
>gi|404251772|ref|ZP_10955740.1| porphobilinogen deaminase [Sphingomonas sp. PAMC 26621]
Length = 303
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 74/174 (42%), Gaps = 46/174 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
+ AL+ GEID AVHSMKDV T + + L R
Sbjct: 66 DRALLAGEIDFAVHSMKDVETVRPEAISIAAMLPRADVRDRIIGADSVVALREGAIVGTS 125
Query: 37 --------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNV RL K+ G + ATL A AGL+ L E V +P
Sbjct: 126 SPRRVAQVKRLRPDLVTILLRGNVDTRLAKVTAGEVDATLLAAAGLERLGRVE-VGTCIP 184
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ML A AQGA+GI S D ++ +L +++H T + V+ ERA L L C
Sbjct: 185 TEVMLPAPAQGAVGIEARSADDRVRGWLSAIDHPPTHRCVLIERALLAVLQADC 238
>gi|325294749|ref|YP_004281263.1| porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065197|gb|ADY73204.1| Porphobilinogen deaminase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 311
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 52/179 (29%)
Query: 2 EEALINGEIDIAVHSMKDVPT--------------------------YLLDKTILP---- 31
E+A++ GE+DIAVHS+KDVP+ Y LD LP
Sbjct: 64 EDAMLKGEVDIAVHSLKDVPSKLPEGLKLIAFSDREDPRDALLSCGKYTLD--TLPEGAV 121
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV R+RKL E A + A AG+K L +
Sbjct: 122 VGTSSLRRKAQLRILRPDLEIRDLRGNVDTRIRKLKEEQYDAIILAAAGVKRLGWENEID 181
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLG-SLNHEETRQAVVCERAFLGTLDGSC 130
IL D M+ +V+QG +GI +D ++ + + ++N E+ A ERAFL T++G C
Sbjct: 182 EILSSDKMIPSVSQGILGIEGREDDPEIERIVKEAINSRESEIAATVERAFLRTVEGGC 240
>gi|242309899|ref|ZP_04809054.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
gi|239523196|gb|EEQ63062.1| porphobilinogen deaminase [Helicobacter pullorum MIT 98-5489]
Length = 314
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE ++ GEIDIAVHS+KDVP ++ L +RE
Sbjct: 65 EELMLKGEIDIAVHSLKDVPVEFVENLGLAAITKREDVRDSFLSFKYKSLEELPSGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL++L EG A + A AG+ L + + I
Sbjct: 125 TTSLRRVMQIHTLRKDLDCISLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIENEIPYI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D M+ A+ Q A+GI C D K+ + L LN ++ ER F+ TL+G C
Sbjct: 185 IPLDFMIPAMGQAALGIECRM-DSKVVEMLDFLNDKKACFETSAEREFVRTLEGGC 239
>gi|333369028|ref|ZP_08461173.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)]
gi|332975659|gb|EGK12548.1| porphobilinogen deaminase [Psychrobacter sp. 1501(2011)]
Length = 339
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G DIAVHS+KDVP L + IL +RE
Sbjct: 74 EQALYDGRADIAVHSLKDVPMQLPEGLILGTYCKRETPTDAFVSNNYDKLEDLPEGAVVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A +GLK + ++E +
Sbjct: 134 TASLRRQCQIKAFRPDLQIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSERIKQE 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ID L AV QGA+ I C S+D+ + + L LN + R + ERA L+G C
Sbjct: 194 IDIDISLPAVGQGALAIECRSDDEAVLELLKPLNDGQARIRLKAERALNRRLEGGC 249
>gi|431928820|ref|YP_007241854.1| hydroxymethylbilane synthase [Pseudomonas stutzeri RCH2]
gi|431827107|gb|AGA88224.1| hydroxymethylbilane synthase [Pseudomonas stutzeri RCH2]
Length = 312
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 66 ETALMENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNHYDDLDALPPGSVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E + +
Sbjct: 126 TSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGERIRSS 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D+ L A QGA+GI C + D ++ L LNH +T VV ERA L+G C
Sbjct: 186 ISVDESLPAGGQGAVGIECRTGDSELHALLECLNHPQTATRVVAERALNKRLNGGC 241
>gi|254483263|ref|ZP_05096495.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
gi|214036486|gb|EEB77161.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2148]
Length = 310
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL------------------------------- 30
E AL++G DIAVHSMKDVP + L
Sbjct: 67 ETALLDGSADIAVHSMKDVPMSFPEGLTLGVICEREDPTDAFVSNNFESLAQLPAGSVVG 126
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RLRKL+EG A + A AGL L E + +
Sbjct: 127 TSSLRRECQLRARRPDLQVKFLRGNVNTRLRKLDEGQYDAIILASAGLIRLGFGERIADS 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI D + + L +++H T Q V+ ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIELREGDGDVLELLQTVHHPLTAQRVIAERAMNQRLNGGC 242
>gi|424801962|ref|ZP_18227504.1| Porphobilinogen deaminase [Cronobacter sakazakii 696]
gi|429119476|ref|ZP_19180193.1| Porphobilinogen deaminase [Cronobacter sakazakii 680]
gi|449309980|ref|YP_007442336.1| porphobilinogen deaminase [Cronobacter sakazakii SP291]
gi|423237683|emb|CCK09374.1| Porphobilinogen deaminase [Cronobacter sakazakii 696]
gi|426326003|emb|CCK10930.1| Porphobilinogen deaminase [Cronobacter sakazakii 680]
gi|449100013|gb|AGE88047.1| porphobilinogen deaminase [Cronobacter sakazakii SP291]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSRQYKSLDEMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 187 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 242
>gi|304309752|ref|YP_003809350.1| porphobilinogen deaminase [gamma proteobacterium HdN1]
gi|301795485|emb|CBL43683.1| Porphobilinogen deaminase [gamma proteobacterium HdN1]
Length = 311
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTIL----- 30
E A++ G DIAVHSMKDVP LD+ L
Sbjct: 67 EVAMLEGIADIAVHSMKDVPVDFPEGLGLSVILEREDPRDAFVSNQYDTLDQLPLGARVG 126
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV +RL KL+ G A L A AGLK L E +
Sbjct: 127 TCSLRRQTQLRARRPDIEILELRGNVNSRLAKLDAGQFDAILLAAAGLKRLGFHERIRAT 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGAIGI C ++D + L LNH +T V ERA L G C
Sbjct: 187 LDPAASLPAVGQGAIGIECRTDDARTLALLAPLNHPDTHTCVSAERAMNHRLQGGC 242
>gi|374595930|ref|ZP_09668934.1| hydroxymethylbilane synthase [Gillisia limnaea DSM 15749]
gi|373870569|gb|EHQ02567.1| hydroxymethylbilane synthase [Gillisia limnaea DSM 15749]
Length = 303
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 46/171 (26%)
Query: 4 ALINGEIDIAVHSMKDVPTYL-----------------------LD-----KTILPCNLQ 35
A++ +IDIAVHSMKDVPT L LD TI +L+
Sbjct: 66 AMLTDKIDIAVHSMKDVPTALPKGIVEAAILKRANSKDILVHKGLDFLESKGTIATGSLR 125
Query: 36 RE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDD 79
R+ GNV R++KL E + A AGL+ +N+T N L +D
Sbjct: 126 RKAQWLNKYPQHAVVDLRGNVNTRMKKLEENSWDGAIFAAAGLERINLTPE--NYLTLDW 183
Query: 80 MLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A AQGA+ + D+ K L +LNH+E+ V ER FL TL+G C
Sbjct: 184 MIPAPAQGAMLVVAKEKDEFCRKTLSALNHKESEICVHTEREFLKTLEGGC 234
>gi|389842684|ref|YP_006344768.1| porphobilinogen deaminase [Cronobacter sakazakii ES15]
gi|387853160|gb|AFK01258.1| porphobilinogen deaminase [Cronobacter sakazakii ES15]
Length = 313
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSRQYKSLDEMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 187 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 242
>gi|417792752|ref|ZP_12440074.1| porphobilinogen deaminase, partial [Cronobacter sakazakii E899]
gi|333953183|gb|EGL71163.1| porphobilinogen deaminase [Cronobacter sakazakii E899]
Length = 309
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSRQYKSLDEMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 187 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 242
>gi|332139557|ref|YP_004425295.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410859790|ref|YP_006975024.1| porphobilinogen deaminase [Alteromonas macleodii AltDE1]
gi|327549579|gb|AEA96297.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Deep
ecotype']
gi|410817052|gb|AFV83669.1| porphobilinogen deaminase [Alteromonas macleodii AltDE1]
Length = 312
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E A++ G DIAVHSMKDVP D + LP
Sbjct: 71 EIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNNHDSLDALPEGAIVG 130
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C +++ GNV RL KL+ G A + A AGL L M +
Sbjct: 131 TSSLRRQCQIRKYRPDLIIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLKMQSRIRMA 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C ++D+++ L +LNH +T V ERA L+G C
Sbjct: 191 LPADISLPAVGQGAVGIECRNDDEELIALLQALNHADTHTRVTAERAMNERLEGGC 246
>gi|218513448|ref|ZP_03510288.1| porphobilinogen deaminase [Rhizobium etli 8C-3]
Length = 137
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 52/88 (59%)
Query: 43 RLRKLNEGVIQATLSALAGLKCLNMTENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAK 102
RLRKL EG + ATL ALAGLK L E +T+IL D A AQGAI I D ++
Sbjct: 2 RLRKLEEGQVDATLLALAGLKRLGKVEVLTDILDPDTFPPAPAQGAICIESRIGDSRIDD 61
Query: 103 YLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++N T V CERAFL LDGSC
Sbjct: 62 LLAAVNDAATFDTVSCERAFLAALDGSC 89
>gi|261418339|ref|YP_003252021.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297529191|ref|YP_003670466.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|319767702|ref|YP_004133203.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
gi|261374796|gb|ACX77539.1| porphobilinogen deaminase [Geobacillus sp. Y412MC61]
gi|297252443|gb|ADI25889.1| porphobilinogen deaminase [Geobacillus sp. C56-T3]
gi|317112568|gb|ADU95060.1| porphobilinogen deaminase [Geobacillus sp. Y412MC52]
Length = 310
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+ G ID+AVHSMKD+P L + ++ +RE
Sbjct: 65 EHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPPGSVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL KL A + A AGL + ++V ++
Sbjct: 125 TSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVISD 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D + AV QGA+ + C +D ++ ++L LN E+T +AV ERAFL ++G C
Sbjct: 185 YLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGC 241
>gi|156935870|ref|YP_001439786.1| porphobilinogen deaminase [Cronobacter sakazakii ATCC BAA-894]
gi|166217766|sp|A7MQJ1.1|HEM3_ENTS8 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|156534124|gb|ABU78950.1| hypothetical protein ESA_03753 [Cronobacter sakazakii ATCC BAA-894]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDEMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGDYDAIILAVAGLKRLQLDARITSP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + + L LNHEET V ERA L+G C
Sbjct: 187 LAPEISLPAVGQGAVGIECRLDDTRTRELLAPLNHEETAVRVRAERAMNTRLEGGC 242
>gi|399022419|ref|ZP_10724496.1| porphobilinogen deaminase [Chryseobacterium sp. CF314]
gi|398085028|gb|EJL75697.1| porphobilinogen deaminase [Chryseobacterium sp. CF314]
Length = 302
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+N EIDIAVHS+KDVPT L + L L+R+
Sbjct: 65 ALLNDEIDIAVHSLKDVPTRLPENIELIAYLERDYPQDILIRKESAKDKEFHELKLATSS 124
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GN+Q RL+KL + AT+ +LAG+K + M +LP+
Sbjct: 125 LRRRAFWLRHYPEASFSDIRGNIQTRLQKLEDQDFDATILSLAGIKRMKMDIGY-EMLPL 183
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG I +A S+ K++ + + +NH+ T+ V ER FL TL+G C
Sbjct: 184 --MIPAPSQGVIAVAGHSDKKEINEIVSRINHKNTQICVDIERNFLRTLEGGC 234
>gi|375009743|ref|YP_004983376.1| porphobilinogen deaminase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288592|gb|AEV20276.1| Porphobilinogen deaminase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 309
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+ G ID+AVHSMKD+P L + ++ +RE
Sbjct: 65 EHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVPRREDARDVLVSKGNRMLSDLPPGSVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL KL A + A AGL + ++V ++
Sbjct: 125 TSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVISD 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D + AV QGA+ + C +D ++ ++L LN E+T +AV ERAFL ++G C
Sbjct: 185 YLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGC 241
>gi|406912364|gb|EKD51989.1| porphobilinogen deaminase, partial [uncultured bacterium]
Length = 273
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 75/176 (42%), Gaps = 50/176 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L+ G I IAVHSMKDVP L ILP L R+
Sbjct: 66 EDELLEGTIGIAVHSMKDVPHSLPSGLILPAMLPRDDPRDVLVSRENNQLSDLPEGAVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL+KL+ G +A + A AGLK L + E +T
Sbjct: 126 TTSLRRLFQVKTLRPDLEFKNLRGNVDTRLKKLDAGEYKAVILAAAGLKRLGLGERITEY 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D++ AV QGAIGI C + + + SLN E+ AV ER F + +C
Sbjct: 186 L---DIVPAVGQGAIGIECCEQNSDLVTLVSSLNDAESFCAVGMERYFARRVGATC 238
>gi|261345249|ref|ZP_05972893.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
gi|282566947|gb|EFB72482.1| hydroxymethylbilane synthase [Providencia rustigianii DSM 4541]
Length = 314
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ G DIAVHSMKDVP + TI LP
Sbjct: 68 ELALLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNHYANIDELPAGSIVG 127
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 128 TSSLRRQCQLKELRPDLVIRDLRGNVGTRLSKLDNGEYDAIILAVAGLKRLELDERIKTA 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D++ L LNH+ET V+ ERA L+G C
Sbjct: 188 LEPELSLPAVGQGAVGIECRLDDQRTRDLLAKLNHDETSICVLAERAMNMRLEGGC 243
>gi|416900371|ref|ZP_11929646.1| porphobilinogen deaminase [Escherichia coli STEC_7v]
gi|422803397|ref|ZP_16851885.1| porphobilinogen deaminase [Escherichia coli M863]
gi|323964049|gb|EGB59539.1| porphobilinogen deaminase [Escherichia coli M863]
gi|327250654|gb|EGE62360.1| porphobilinogen deaminase [Escherichia coli STEC_7v]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ND + + L +LNH ET V ERA L+G C
Sbjct: 185 AALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRLEGGC 242
>gi|238760184|ref|ZP_04621331.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
gi|238701620|gb|EEP94190.1| Porphobilinogen deaminase [Yersinia aldovae ATCC 35236]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ G DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPIAFPDGLGLVTICERDDPRDAFVSSHFAHLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL++G A + A+AGL L + +
Sbjct: 127 TSSLRRQCQLRERRPDLVIRDLRGNVGTRLAKLDKGEYHAIILAVAGLNRLGLETRIRYA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L LNH +T V+ ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDDFTRQLLAPLNHRDTELRVLAERAMNTRLEGGC 242
>gi|307546845|ref|YP_003899324.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
gi|307218869|emb|CBV44139.1| porphobilinogen deaminase [Halomonas elongata DSM 2581]
Length = 380
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDK-----TIL 30
EEA+++G DIAVHSMKDVP LD+ I
Sbjct: 135 EEAMLDGRADIAVHSMKDVPMQFPESLGLSVILAGAEPTDAFVSNQYASLDELPEGARIG 194
Query: 31 PCNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RL KL+ G A L A AGLK L + E +T
Sbjct: 195 TSSLRRGLQMRERRPDLEVLNLRGNVQTRLGKLDNGEFDAILLATAGLKRLGLEERITQE 254
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L A QGA+GI C +D ++ L L+ +T V ERA L+G C
Sbjct: 255 LPPEICLPACGQGALGIECRMHDAELIGLLAPLDDPDTATRVRAERAMNTRLEGGC 310
>gi|429331005|ref|ZP_19211779.1| porphobilinogen deaminase [Pseudomonas putida CSV86]
gi|428764332|gb|EKX86473.1| porphobilinogen deaminase [Pseudomonas putida CSV86]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ + DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLEQQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITDT 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSEIHTLLAPLHHADTADRVTAERALNKHLNGGC 242
>gi|56421180|ref|YP_148498.1| porphobilinogen deaminase [Geobacillus kaustophilus HTA426]
gi|61213219|sp|Q5KWK6.1|HEM3_GEOKA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|56381022|dbj|BAD76930.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Geobacillus kaustophilus HTA426]
Length = 309
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L+ G ID+AVHSMKD+P L + ++ +RE
Sbjct: 65 EHELLAGGIDMAVHSMKDMPAVLPEGLVIGAVSRREDARDVLVSKGNRMLSDLPPGSVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL KL A + A AGL + ++V ++
Sbjct: 125 TSSLRRSAQLLAYRPDLTIKWIRGNIDTRLAKLESEEYDAIVLAAAGLARMGWGDDVISD 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D + AV QGA+ + C +D ++ ++L LN E+T +AV ERAFL ++G C
Sbjct: 185 YLPFDVCVPAVGQGALAVECREDDDELRQWLSRLNDEQTERAVRAERAFLQQMEGGC 241
>gi|398869290|ref|ZP_10624667.1| porphobilinogen deaminase [Pseudomonas sp. GM78]
gi|398230810|gb|EJN16818.1| porphobilinogen deaminase [Pseudomonas sp. GM78]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLEALPPGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLNRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILASAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C + D ++ L L+H++T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRTADSEIHALLAPLHHQDTATRVSAERALNKHLNGGC 242
>gi|82751259|ref|YP_417000.1| porphobilinogen deaminase [Staphylococcus aureus RF122]
gi|123727415|sp|Q2YTB9.1|HEM3_STAAB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|82656790|emb|CAI81219.1| Porphobilinogen deaminase [Staphylococcus aureus RF122]
Length = 308
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ L ID+A+HS+KDVP+ + + L C RE
Sbjct: 65 QHELFEKNIDMAIHSLKDVPSVIPEGLTLGCIPDRELPFDAYISKTHTPLSQLPEGSIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGL+ + +++ VT+
Sbjct: 125 TSSLRRGAQILSKYPNLEIKWIRGNIDTRLEKLQTEDYDAIILAAAGLRRMGWSDDIVTS 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ID +L A+ QGA+GI C S+D+++ L ++++E + V ER FL +DGSC
Sbjct: 185 YLDIDTLLPAIGQGALGIECRSDDEELLTLLSKVHNDEVAKCVTAERTFLAEMDGSC 241
>gi|422808168|ref|ZP_16856594.1| porphobilinogen deaminase [Escherichia fergusonii B253]
gi|424818207|ref|ZP_18243358.1| porphobilinogen deaminase [Escherichia fergusonii ECD227]
gi|324111028|gb|EGC05015.1| porphobilinogen deaminase [Escherichia fergusonii B253]
gi|325499227|gb|EGC97086.1| porphobilinogen deaminase [Escherichia fergusonii ECD227]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 78/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD+ LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 185 DALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRLEGGC 242
>gi|417116590|ref|ZP_11967451.1| hydroxymethylbilane synthase [Escherichia coli 1.2741]
gi|386139134|gb|EIG80289.1| hydroxymethylbilane synthase [Escherichia coli 1.2741]
Length = 318
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 72 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 129
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 130 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 189
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ND + + L +LNH ET V ERA L+G C
Sbjct: 190 AALPPEISLPAVGQGAVGIECRLNDTRTRELLAALNHHETALRVTAERAMNTRLEGGC 247
>gi|119475318|ref|ZP_01615671.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
gi|119451521|gb|EAW32754.1| porphobilinogen deaminase [marine gamma proteobacterium HTCC2143]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + KT+ LP
Sbjct: 67 ETAMLEGRADIAVHSMKDVPMEFPEGLELSIICEREDPRDAFVSNHFKTVNELPLGSRVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RLRKL+EG A + A AGL L M + + +
Sbjct: 127 TSSLRRQCQLRALRPDLNIIDLRGNVNTRLRKLDEGQYDAIILASAGLIRLGMEQRIADP 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L A QGA+G+ S+D ++ L LNH T V ERA L G C
Sbjct: 187 IAVDSSLPAGGQGAVGVEARSDDHRIQALLAPLNHRSTALRVSAERAMNLRLQGGC 242
>gi|218550973|ref|YP_002384764.1| porphobilinogen deaminase [Escherichia fergusonii ATCC 35469]
gi|226740637|sp|B7LU53.1|HEM3_ESCF3 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|218358514|emb|CAQ91161.1| hydroxymethylbilane synthase [Escherichia fergusonii ATCC 35469]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 78/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD+ LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNKYASLDE--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 185 DALPPEVSLPAVGQGAVGIECRLDDTRTRELLAALNHPETALRVTAERAMNTRLEGGC 242
>gi|432483219|ref|ZP_19725166.1| porphobilinogen deaminase [Escherichia coli KTE210]
gi|431003524|gb|ELD19007.1| porphobilinogen deaminase [Escherichia coli KTE210]
Length = 320
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + K L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDTRTRKLLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|407367245|ref|ZP_11113777.1| porphobilinogen deaminase [Pseudomonas mandelii JR-1]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENEADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDELPQGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLEIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D + L L+H++T V ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADSVIHALLAPLHHQDTATRVTAERSLNKHLNGGC 242
>gi|254515499|ref|ZP_05127559.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
gi|219675221|gb|EED31587.1| porphobilinogen deaminase [gamma proteobacterium NOR5-3]
Length = 308
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK------------------------TILP------ 31
E AL++G IAVHSMKDVP D LP
Sbjct: 66 ETALLDGRAHIAVHSMKDVPMEFPDGLELAVICEREEPADAFVSNNYENLDALPPGAVVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RLRKL+EG A + A AGL L M E +
Sbjct: 126 TSSLRRECQLRANRPDLTVRFLRGNVNTRLRKLDEGEYDAIILACAGLIRLEMGERIRAR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+ + L A QGA+GI S+D + L L+H T + V+ ERA L G C
Sbjct: 186 IPVTESLPAGGQGAVGIEIRSDDSATRELLAPLHHGPTAERVLAERALNRRLQGGC 241
>gi|254525987|ref|ZP_05138039.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
gi|221537411|gb|EEE39864.1| porphobilinogen deaminase [Prochlorococcus marinus str. MIT 9202]
Length = 318
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 75/179 (41%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G DIAVHS+KD+PT L L C +RE
Sbjct: 67 EAQMLVGHADIAVHSLKDLPTNLPTGLKLGCITKREDPADALVVSKKNDCYKLETLPEGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L +
Sbjct: 127 IVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFESRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+DKK+ + + L + T Q + ERAFL L+G C
Sbjct: 187 HQIIPSEISLHAVGQGALGIECKSDDKKVLEIINVLEDKPTSQRCLAERAFLRELEGGC 245
>gi|228475193|ref|ZP_04059919.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
gi|418618557|ref|ZP_13181422.1| hydroxymethylbilane synthase [Staphylococcus hominis VCU122]
gi|228270804|gb|EEK12206.1| hydroxymethylbilane synthase [Staphylococcus hominis SK119]
gi|374827317|gb|EHR91180.1| hydroxymethylbilane synthase [Staphylococcus hominis VCU122]
Length = 310
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N +ID+A+HS+KDVP+ + + L C RE
Sbjct: 68 LFNNDIDMAIHSLKDVPSIIPEGLTLGCIPDREIPFDAYIAKNHVPLEELPKNSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TNILP 76
GN+ RL KL A + A AGLK + +++V T L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLNKLETEDYDAIILAAAGLKRMGWSDDVVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C SND ++ + L +++ E V ER FL ++DGSC
Sbjct: 188 KDTLLPAIGQGALGIECRSNDIELLELLQKVHNNEVANCVTAERTFLASMDGSC 241
>gi|452995860|emb|CCQ92248.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Clostridium ultunense Esp]
Length = 303
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 75/180 (41%), Gaps = 56/180 (31%)
Query: 2 EEALINGEIDIAVHSMKDVPT--------------------------------------- 22
EEAL++GEI AVHSMKDVP
Sbjct: 65 EEALLSGEIHFAVHSMKDVPAELPEGLAILSIPKRVTANDVLISKDGKKLDELPFGAKVG 124
Query: 23 ------------YLLDKTILPCNLQREGNVQARLRKLNEGVIQATLSALAGLKCLNMTEN 70
Y D T+LP GN+ RLRKL E + A + A AGL+ + T
Sbjct: 125 TGSLRRQAQLLNYRPDLTVLPLR----GNIDTRLRKLREEGLDAIILAAAGLERMGWTGE 180
Query: 71 VTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
VT ILP + ML AV QGA+GI + + L +++ T ERAFL L+G C
Sbjct: 181 VTEILPTEIMLPAVGQGALGIEGRWEGEATS-LLQTIHDPITAVTTAAERAFLYRLEGGC 239
>gi|387929922|ref|ZP_10132599.1| porphobilinogen deaminase [Bacillus methanolicus PB1]
gi|387586740|gb|EIJ79064.1| porphobilinogen deaminase [Bacillus methanolicus PB1]
Length = 311
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A++N EID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQAMLNKEIDMAVHSMKDMPAVLPEGLMIGCIPEREDHRDALISKNHIPLKELKLGAKIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNM-TENVTN 73
GN+ RL KL A + A AGL + +E VT
Sbjct: 125 TSSLRRGAQILANRPDLEIKWIRGNIDTRLAKLETEEYDAIILAAAGLSRMGWASEVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C S+D ++ + L E+T +AV ER FL ++G C
Sbjct: 185 FLETDVCLPAVGQGALAIECRSDDSELLQLFEKLTSEKTSRAVRAERTFLQKMEGGC 241
>gi|87118000|gb|ABD20307.1| HemC [Shigella dysenteriae]
gi|87118002|gb|ABD20308.1| HemC [Shigella dysenteriae]
gi|87118004|gb|ABD20309.1| HemC [Shigella dysenteriae]
Length = 272
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 41 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 98
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 99 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 158
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 159 AALPPDISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGC 216
>gi|425452522|ref|ZP_18832339.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 7941]
gi|389765628|emb|CCI08516.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 7941]
Length = 319
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSKNQDYQLDNLPEGS 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G + A+AGL+ L + + V
Sbjct: 131 VIGTSSLRRLAQLRHHYPHLTFKDVRGNVNTRLAKLDAGEYDGIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDKCYAERAFLRELEGGC 249
>gi|78357663|ref|YP_389112.1| porphobilinogen deaminase [Desulfovibrio alaskensis G20]
gi|123741224|sp|Q30Y29.1|HEM3_DESDG RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|78220068|gb|ABB39417.1| porphobilinogen deaminase [Desulfovibrio alaskensis G20]
Length = 316
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++G DIAVHSMKDVP L L +RE
Sbjct: 66 EEALLDGRADIAVHSMKDVPMELPQGLTLGAIPEREVPTDSLLSARYDGLDALPQGAVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ R+RKL +G A + A +GLK L T +
Sbjct: 126 TSSLRRQSQILAMRPDLEVKWLRGNVQTRIRKLMDGEYDAIIMATSGLKRLGETAPFHSE 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + AV QGA+G+ S+ + +A+ L L+H +R V ER FL L G C
Sbjct: 186 LGPPLFMPAVGQGALGLEYRSDRQDLAEMLAFLDHRPSRICVEAERGFLFGLQGGC 241
>gi|425448260|ref|ZP_18828238.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9443]
gi|389730999|emb|CCI04898.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9443]
Length = 319
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAAISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|384044743|ref|YP_005492760.1| porphobilinogen deaminase [Bacillus megaterium WSH-002]
gi|345442434|gb|AEN87451.1| Porphobilinogen deaminase (Hydroxymethylbilane synthase) [Bacillus
megaterium WSH-002]
Length = 310
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++ EID+AVHSMKD+P L + + C RE
Sbjct: 65 EQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGL + +++ VT
Sbjct: 125 TSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTVTQ 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + AV QGA+ I C ND ++ L +LNH+ET +AV ER FL ++G C
Sbjct: 185 YLEPEISIPAVGQGALAIECRENDHELLSLLQTLNHDETARAVRAERVFLKEMEGGC 241
>gi|336114563|ref|YP_004569330.1| porphobilinogen deaminase [Bacillus coagulans 2-6]
gi|335367993|gb|AEH53944.1| porphobilinogen deaminase [Bacillus coagulans 2-6]
Length = 310
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++ EID+AVHSMKDVP L D ++ C +RE
Sbjct: 65 EDAMLHHEIDMAVHSMKDVPAVLPDGLVIGCIPEREDVRDALISKNGTPFSGLKEGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMT-ENVTN 73
GN+ RL KL G A + A AGLK + + + VT
Sbjct: 125 TSSLRRGAQLLAVRSDIRIKSVRGNIDTRLEKLKNGDYDAIVLAAAGLKRMGWSADTVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D L A+ QGA+ + C ++D ++ L L ET + V ER FL ++G C
Sbjct: 185 FFDPDICLPAIGQGALAVECRADDGELLDALRELESAETAETVRAERVFLDKMEGGC 241
>gi|119714759|ref|YP_921724.1| porphobilinogen deaminase [Nocardioides sp. JS614]
gi|119535420|gb|ABL80037.1| hydroxymethylbilane synthase [Nocardioides sp. JS614]
Length = 314
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 47/175 (26%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
+AL+ GE+D+AVHS+KD+PTY + L RE
Sbjct: 68 DALLRGEVDVAVHSLKDLPTYPTEGITLAAVPVREDPRDVVVARDGLTLGELPVGSRVGT 127
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV R+ K+ G A + A AGL + E VT +L
Sbjct: 128 GSPRRVAQLHALGLGLEVVGIRGNVDTRIGKVRSGECDAVILARAGLARIGRLEAVTEVL 187
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A QGA+ + C ++D A+ +L+ R AV ERA L TL+G C
Sbjct: 188 DPLQMLPAPGQGALAVECRTDDPLAAQVAAALDDPRVRAAVTAERAVLATLEGGC 242
>gi|451981917|ref|ZP_21930254.1| Porphobilinogen deaminase [Nitrospina gracilis 3/211]
gi|451760857|emb|CCQ91526.1| Porphobilinogen deaminase [Nitrospina gracilis 3/211]
Length = 317
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE L+ E+DIAVHSMKDVP L L +RE
Sbjct: 75 EEGLLRNEVDIAVHSMKDVPMKLPPGLGLSVITEREDPRDALISRDGQKLDELPQGAKVG 134
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL K+ + + + A AGLK + M + +T
Sbjct: 135 TGSFRRTTQLLAYRPDLQIVPMRGNVGTRLDKMEKENLDGIILAAAGLKRMGMADRITEC 194
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + ML QGA+GI +D + + L HEET A+ ER+FL L+G C
Sbjct: 195 IPPEIMLPGGGQGAVGIETRKDDPGVMMRILPLEHEETHTALEAERSFLHRLEGGC 250
>gi|398990074|ref|ZP_10693281.1| porphobilinogen deaminase [Pseudomonas sp. GM24]
gi|399012424|ref|ZP_10714745.1| porphobilinogen deaminase [Pseudomonas sp. GM16]
gi|398115546|gb|EJM05327.1| porphobilinogen deaminase [Pseudomonas sp. GM16]
gi|398145408|gb|EJM34194.1| porphobilinogen deaminase [Pseudomonas sp. GM24]
Length = 313
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ + DIAVHSMKDVP + L C +RE
Sbjct: 67 ETALLENQADIAVHSMKDVPMDFPEGLGLFCICEREDPRDAFVSNTYASLDALPAGAIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+H +T V ERA L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSADTEIHALLAPLHHADTTSRVTAERALNKHLNGGC 242
>gi|451967254|ref|ZP_21920499.1| porphobilinogen deaminase [Edwardsiella tarda NBRC 105688]
gi|451313972|dbj|GAC65861.1| porphobilinogen deaminase [Edwardsiella tarda NBRC 105688]
Length = 317
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TILP-------------------------- 31
E AL+ G DIAVHSMKDVP D TI P
Sbjct: 73 ELALLEGRADIAVHSMKDVPVAFPDGLGLVTICPREDPRDAFVSPHFASLDQLPPGSIVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + +
Sbjct: 133 TSSLRRQCQLRAARPDLQIRDLRGNVGTRLAKLDAGEYDAIILAAAGLKRLQLEARIRTP 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C D+ +L LNHE T V ERA L+G C
Sbjct: 193 LTAEQSLPAVGQGAVGIECRLADEATRAWLAPLNHESTALRVSAERAMNMRLEGGC 248
>gi|144479|gb|AAA23113.1| porphobilinogen deaminase [Prosthecochloris vibrioformis]
Length = 279
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILP------------------------------ 31
E+ L+ GEID+AVHS+KDVPT + P
Sbjct: 34 EKHLLAGEIDLAVHSLKDVPTVRRKAWLSPRSPSVKTPRRHHFQVRQGVDGPSAEAKMAT 93
Query: 32 CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
+L+R GN+ R +K +EG A + A AG+ L ++ +T IL
Sbjct: 94 SSLRRMSQLLSLRPDLEIMDIRGNLNTRFKKFDEGDFDAMMLAYAGVYRLEFSDRITEIL 153
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P + ML AV QGA+GI ++D + + + LN + T ERA L L G C
Sbjct: 154 PHETMLPAVGQGALGIETRTDDAETREIVRVLNDDNTEMCCRAERALLRHLQGGC 208
>gi|425463895|ref|ZP_18843225.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9809]
gi|389828720|emb|CCI30033.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9809]
Length = 319
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 EVGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDTLPEGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDAIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P L AV QGA+GI C D ++ + L L H +R ERAFL L+G C
Sbjct: 191 HQVIPAAISLHAVGQGALGIECRDADPEVLEVLKVLEHAPSRDRCYAERAFLRELEGGC 249
>gi|423073685|ref|ZP_17062424.1| hydroxymethylbilane synthase [Desulfitobacterium hafniense DP7]
gi|361855526|gb|EHL07494.1| hydroxymethylbilane synthase [Desulfitobacterium hafniense DP7]
Length = 322
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------LDKTILP----------- 31
E L+NGEID AVHS+KD+PT L L K P
Sbjct: 79 EVGLLNGEIDCAVHSLKDLPTVLPPGLEIAAFCEREEPRDVFLSKDGTPLGSLPAGSIIG 138
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q R RKL E + + A AG+K L + +T
Sbjct: 139 TSSLRRKAQLQNYRSDLSFADLRGNLQTRWRKLQESDMAGIVLAAAGVKRLGWEDRITEY 198
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + ML AV QGAI + + + K L LNH +T +AV ERA L L+G C
Sbjct: 199 ISEEIMLSAVGQGAIAVEIAAQRADVRKMLDLLNHGDTERAVKAERALLYRLEGGC 254
>gi|302879710|ref|YP_003848274.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
gi|302582499|gb|ADL56510.1| porphobilinogen deaminase [Gallionella capsiferriformans ES-2]
Length = 317
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E AL +G D AVHS+KDVP L + +L
Sbjct: 76 ETALEDGRADFAVHSLKDVPMVLPEGFVLAAIGEREDPHDAFVSNNYENLAALPAGSVVG 135
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RLRKL+EG+ A + A AGLK L + + +
Sbjct: 136 TSSLRRESQLRARFPHLVIEPLRGNVQTRLRKLDEGLYAAIILAAAGLKRLGLATRIRAV 195
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L AV QGA+GI C ++ + L L+H +T V ERA L+GSC
Sbjct: 196 ISSEDSLPAVGQGALGIECRADRLDVIAALQPLHHPDTAACVFAERAMSRALNGSC 251
>gi|254467792|ref|ZP_05081198.1| porphobilinogen deaminase [beta proteobacterium KB13]
gi|207086602|gb|EDZ63885.1| porphobilinogen deaminase [beta proteobacterium KB13]
Length = 292
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL-------------------------------LDKTIL 30
E AL+N + D+AVHSMKDVP L D I
Sbjct: 51 EHALLNDDADLAVHSMKDVPMDLPEPFEICAISERENPSDAFISNKYASLDDLPQDAVIG 110
Query: 31 PCNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+Q RL+KL+ G+ A + A AGL LN+ + +
Sbjct: 111 TSSLRRQSLIKHTRPDLIIESLRGNLQTRLKKLDSGIYDAIILASAGLIRLNLENRIKST 170
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + +V QGA+GI N ++ ++L LN E+T+ V ER TL GSC
Sbjct: 171 LDVKQYIPSVGQGALGIEILKNKSEVKEFLDFLNDEQTQIQVEAERKISKTLAGSC 226
>gi|302535112|ref|ZP_07287454.1| porphobilinogen deaminase [Streptomyces sp. C]
gi|302444007|gb|EFL15823.1| porphobilinogen deaminase [Streptomyces sp. C]
Length = 322
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+AL+ GE+D AVHS+KD+PT D+ ++ +RE
Sbjct: 68 RDALVRGEVDFAVHSLKDLPTAQPDELVIAAMPKREDPRDALVARDGLTFEQLPDGARVG 127
Query: 38 ---------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN 70
GNV R+ + G + A + A AGL + +
Sbjct: 128 TGSPRRMAQLNAYARSLGKSVETVAIRGNVDTRIGFVRSGELDAVVLAAAGLNRIGRADE 187
Query: 71 VTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
T++L +D++L A QGA+ + C ++D + LG L+ TR AV ERA L L+ C
Sbjct: 188 ATDLLSVDNVLPAPGQGALAVECLASDADLISALGRLDDPHTRAAVTAERALLAALEAGC 247
>gi|340001392|ref|YP_004732276.1| porphobilinogen deaminase [Salmonella bongori NCTC 12419]
gi|339514754|emb|CCC32524.1| porphobilinogen deaminase [Salmonella bongori NCTC 12419]
Length = 313
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHPQTALRVTAERAMNTRLEGGC 242
>gi|427725996|ref|YP_007073273.1| hydroxymethylbilane synthase [Leptolyngbya sp. PCC 7376]
gi|427357716|gb|AFY40439.1| hydroxymethylbilane synthase [Leptolyngbya sp. PCC 7376]
Length = 321
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 76/180 (42%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+ ++ E D AVHS+KD+PT L + +L C +R
Sbjct: 72 EDGMLKRETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVHEKHKDKKLATLPEGA 131
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A AGL+ L+ + +
Sbjct: 132 IIGTSSLRRLAQLRHHYPHLEFKDIRGNVNTRLAKLDSGDYDAIILAAAGLQRLDFGDRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGS-LNHEETRQAVVCERAFLGTLDGSC 130
I+P D L AV QGA+GI C D ++ + L L H E+R ERAFL L+G C
Sbjct: 192 HQIIPSDISLHAVGQGALGIECRDGDTEILELLRPVLEHIESRDRCYAERAFLRELEGGC 251
>gi|16767209|ref|NP_462824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194449507|ref|YP_002047954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|207859144|ref|YP_002245795.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|375003804|ref|ZP_09728142.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375121391|ref|ZP_09766558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|378447283|ref|YP_005234915.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378452837|ref|YP_005240197.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378701805|ref|YP_005183763.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|378991227|ref|YP_005254391.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379703187|ref|YP_005244915.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|409247615|ref|YP_006888311.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|417344978|ref|ZP_12125206.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417376983|ref|ZP_12146017.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|417477695|ref|ZP_12171603.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|421882894|ref|ZP_16314143.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|6960263|gb|AAF33453.1| 89% identity with E. coli porphobilinogen deaminase (HEMC)
(SP:P06983); contains similarity to Pfam family PF01379
(Porphobilinogen deaminase), score=627.8, E=6.2e-185,
N=1 [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16422502|gb|AAL22783.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|194407811|gb|ACF68030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|206710947|emb|CAR35314.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261249062|emb|CBG26922.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996216|gb|ACY91101.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160454|emb|CBW19983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|320088349|emb|CBY98109.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|323132286|gb|ADX19716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|326625658|gb|EGE32003.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. SD3246]
gi|332990774|gb|AEF09757.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|353074125|gb|EHB39887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353591314|gb|EHC49616.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353637557|gb|EHC83341.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|357953505|gb|EHJ80023.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|379987534|emb|CCF86416.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 318
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 72 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 131
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 192 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 247
>gi|374603448|ref|ZP_09676427.1| phosphate ABC transporter ATPase [Paenibacillus dendritiformis
C454]
gi|374390919|gb|EHQ62262.1| phosphate ABC transporter ATPase [Paenibacillus dendritiformis
C454]
Length = 306
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+AL + EID+AVHSMKD+P L + + LP
Sbjct: 69 EQALADREIDMAVHSMKDMPWQLQEGLMVGAIPKREDPRDGLIMKTGSSLDDLPQGATVG 128
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C LQ GN+ RLRKL + A + A AGL + + +T+
Sbjct: 129 TSSLRRSCQLQALRPDLKIEPLRGNIDTRLRKLETEGLDAIVLAAAGLHRMGWQDRITSY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ + AV QGA+GI C D+ + K L + +T + V ERAFLG L+G C
Sbjct: 189 LSEEECVPAVGQGALGIECREEDEDLRKLLECYHDADTARTVQAERAFLGRLNGGC 244
>gi|241766973|ref|ZP_04764769.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
gi|241362537|gb|EER58429.1| porphobilinogen deaminase [Acidovorax delafieldii 2AN]
Length = 244
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G IAVHS+KDVP L + L C ++RE
Sbjct: 68 EVALEEGRAHIAVHSLKDVPMELPEGFALACVMEREDPRDAFVSPRYASLEALPQGAVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG A + A AGLK L + E +
Sbjct: 128 TSSLRRQVLLQALRPDLRIEPLRGNLDTRLRKLDEGQYDAIVLAAAGLKRLGLQERIRTE 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ML A QGA+GI S+ + + + L L H+ET V ERA + GSC
Sbjct: 188 FATTAMLPAAGQGALGIEIRSDRQDLIEALAPLAHQETWLTVTAERAVSRAMGGSC 243
>gi|406937035|gb|EKD70616.1| hypothetical protein ACD_46C00478G0001 [uncultured bacterium]
Length = 309
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+NG DIAVHSMKDVP L LP +RE
Sbjct: 67 EDALLNGRADIAVHSMKDVPMELPPGLALPVICEREEPRDVFVSNQYDSFMQLPRSALVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RL++L++G A + A AGLK + +
Sbjct: 127 TASLRRQTQLRALRSDLDYQDLRGNINTRLKRLDDGHFDAVILAGAGLKRMGFVNRIRAY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ L A QGA+G+ C +D+ + + LNH T V+ ERA L+G C
Sbjct: 187 FSTKESLPAAGQGALGLECREDDETIKTLIMPLNHAITHDCVIAERAVCRYLNGGC 242
>gi|383640176|ref|ZP_09952582.1| porphobilinogen deaminase [Sphingomonas elodea ATCC 31461]
Length = 311
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 75/174 (43%), Gaps = 46/174 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
+ AL+ GEID AVHSMKDV T + + L R
Sbjct: 74 DRALLEGEIDCAVHSMKDVETLRPEAIAIAAMLPRADVRDRLVGAESLAALKPGAVIGTA 133
Query: 37 --------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNV RL +L G ATL A AGL+ L +V ++LP
Sbjct: 134 SPRRAAQVKRHRPDVSTVLFRGNVDTRLARLAAGEADATLLASAGLERLG-RHDVGHVLP 192
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ML A AQGA+GI + D + LG+++H +TR V+ ERA L L C
Sbjct: 193 TNVMLPAPAQGAVGIEARAADTRTLALLGAIDHPKTRACVMAERALLAALMADC 246
>gi|417471029|ref|ZP_12167088.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353623799|gb|EHC72992.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
Length = 307
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 242
>gi|417337651|ref|ZP_12119726.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353563894|gb|EHC30116.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 287
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 41 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 100
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 101 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 160
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 161 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 216
>gi|239905446|ref|YP_002952185.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
gi|239795310|dbj|BAH74299.1| porphobilinogen deaminase [Desulfovibrio magneticus RS-1]
Length = 311
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL--------PCN-------------------- 33
EEAL++G D+AVHSMKDVP ++ PC+
Sbjct: 66 EEALLDGRADLAVHSMKDVPAEQPAGLVVGIVPEREDPCDRLLSVAYDSLAALPQGATVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GN+ R++KL +G A + A AGL L ++
Sbjct: 126 TSSLRRKAQLLALRPDLAIVDLRGNLDTRVKKLLDGQFDAIIVAAAGLNRLELSAPKAVR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A AQGA+GI +D + A L +H E+ AV ER FLG L+G C
Sbjct: 186 LGPPEFLPAAAQGALGIEYRLDDPETAAMLAFFDHPESHDAVAAERGFLGHLEGGC 241
>gi|170078218|ref|YP_001734856.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
gi|169885887|gb|ACA99600.1| porphobilinogen deaminase [Synechococcus sp. PCC 7002]
Length = 321
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 76/180 (42%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E+ ++ GE D AVHS+KD+PT L + +L C +R
Sbjct: 72 EDGMLKGETDFAVHSLKDLPTNLPEGLMLGCVTERVDPADALVVNEKHRDKKLETLPSGS 131
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A AGL+ L+ + +
Sbjct: 132 VIGTSSLRRLAQLRHHFPHLEFKDIRGNVNTRLAKLDRGEYDAIILAAAGLQRLDFGDRI 191
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGS-LNHEETRQAVVCERAFLGTLDGSC 130
I+ D L AV QGA+GI C D+++ L L H E+R ER+FL L+G C
Sbjct: 192 HQIISSDISLHAVGQGALGIECRDGDEEILGLLRPVLEHAESRDRCYAERSFLRQLEGGC 251
>gi|62182409|ref|YP_218826.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167553883|ref|ZP_02347627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168244626|ref|ZP_02669558.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168263173|ref|ZP_02685146.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168467648|ref|ZP_02701485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442426|ref|YP_002043172.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197247501|ref|YP_002148864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|213029666|ref|ZP_03344113.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213416718|ref|ZP_03349862.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425401|ref|ZP_03358151.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213649584|ref|ZP_03379637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865139|ref|ZP_03387258.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|375116756|ref|ZP_09761926.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
gi|62130042|gb|AAX67745.1| porphobilinogen deaminase (hydroxymethylbilane synthase)
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194401089|gb|ACF61311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|195630016|gb|EDX48676.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197211204|gb|ACH48601.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205321788|gb|EDZ09627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205336530|gb|EDZ23294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205348255|gb|EDZ34886.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|322716902|gb|EFZ08473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SCSA50]
Length = 320
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 74 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 134 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 194 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 249
>gi|161617053|ref|YP_001591018.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|378961536|ref|YP_005219022.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|383498550|ref|YP_005399239.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|386589306|ref|YP_006085706.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|417361752|ref|ZP_12135567.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|161366417|gb|ABX70185.1| hypothetical protein SPAB_04886 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|353583143|gb|EHC43591.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|374355408|gb|AEZ47169.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|380465371|gb|AFD60774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 798]
gi|383796350|gb|AFH43432.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
Length = 286
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 40 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 99
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 100 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 159
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 160 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 215
>gi|16762196|ref|NP_457813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143685|ref|NP_807027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415793|ref|YP_152868.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194734788|ref|YP_002116870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197264899|ref|ZP_03164973.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197301061|ref|ZP_02663450.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197364723|ref|YP_002144360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243181|ref|YP_002217871.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205358019|ref|ZP_02574964.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205360118|ref|ZP_02834695.2| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224585757|ref|YP_002639556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912944|ref|ZP_04656781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289825622|ref|ZP_06544800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|374979436|ref|ZP_09720772.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|378986628|ref|YP_005249784.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|416427287|ref|ZP_11693466.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416434885|ref|ZP_11697906.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416436850|ref|ZP_11698518.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416447467|ref|ZP_11705875.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416454725|ref|ZP_11710446.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416457504|ref|ZP_11712219.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416464137|ref|ZP_11716233.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416475392|ref|ZP_11720615.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416489291|ref|ZP_11726121.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416496557|ref|ZP_11729183.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416507854|ref|ZP_11735680.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416517630|ref|ZP_11739578.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416529326|ref|ZP_11744293.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416540101|ref|ZP_11750275.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416547090|ref|ZP_11754379.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416548867|ref|ZP_11755081.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416562000|ref|ZP_11761846.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|416572814|ref|ZP_11767478.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416574858|ref|ZP_11768027.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416587443|ref|ZP_11776053.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416594740|ref|ZP_11780557.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416596069|ref|ZP_11781163.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416606152|ref|ZP_11787547.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416613364|ref|ZP_11791998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416624019|ref|ZP_11797763.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416634937|ref|ZP_11802829.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416639331|ref|ZP_11804465.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|416649624|ref|ZP_11809996.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416660787|ref|ZP_11815222.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|416668628|ref|ZP_11819015.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416678415|ref|ZP_11822642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416689487|ref|ZP_11825593.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416704573|ref|ZP_11830327.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416710660|ref|ZP_11834688.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416717802|ref|ZP_11840043.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416723391|ref|ZP_11844103.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416728979|ref|ZP_11847715.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416742415|ref|ZP_11855797.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416748193|ref|ZP_11858584.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416759488|ref|ZP_11864319.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416764225|ref|ZP_11867860.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416772751|ref|ZP_11873450.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|418486086|ref|ZP_13055060.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418492943|ref|ZP_13059417.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|418496826|ref|ZP_13063255.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418499721|ref|ZP_13066125.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418506060|ref|ZP_13072400.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507148|ref|ZP_13073473.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418513694|ref|ZP_13079919.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418526469|ref|ZP_13092445.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|418762488|ref|ZP_13318616.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418764329|ref|ZP_13320429.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418773185|ref|ZP_13329176.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418777946|ref|ZP_13333867.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418779093|ref|ZP_13334999.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785621|ref|ZP_13341451.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418791435|ref|ZP_13347197.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791694|ref|ZP_13347448.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418797747|ref|ZP_13353430.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|418802633|ref|ZP_13358259.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|418807113|ref|ZP_13362679.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418811274|ref|ZP_13366808.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418818511|ref|ZP_13373982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418821054|ref|ZP_13376480.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418826260|ref|ZP_13381503.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|418829041|ref|ZP_13384033.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418836038|ref|ZP_13390928.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418842988|ref|ZP_13397794.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418847534|ref|ZP_13402288.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418851591|ref|ZP_13406301.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418855060|ref|ZP_13409722.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418859161|ref|ZP_13413768.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418862358|ref|ZP_13416900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418865894|ref|ZP_13420360.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|419729896|ref|ZP_14256851.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419733445|ref|ZP_14260343.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419739256|ref|ZP_14266006.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419744845|ref|ZP_14271494.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419747562|ref|ZP_14274071.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|419788022|ref|ZP_14313721.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419792708|ref|ZP_14318339.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|421359311|ref|ZP_15809606.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421361233|ref|ZP_15811498.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421369197|ref|ZP_15819380.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421370080|ref|ZP_15820251.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375146|ref|ZP_15825260.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421381824|ref|ZP_15831878.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421383672|ref|ZP_15833706.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421388237|ref|ZP_15838229.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421395359|ref|ZP_15845296.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421399738|ref|ZP_15849632.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421401719|ref|ZP_15851586.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421408863|ref|ZP_15858661.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421410845|ref|ZP_15860617.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421417905|ref|ZP_15867613.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421420162|ref|ZP_15869841.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421424300|ref|ZP_15873944.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421428816|ref|ZP_15878419.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421436058|ref|ZP_15885592.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421438482|ref|ZP_15887978.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421442476|ref|ZP_15891926.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421447167|ref|ZP_15896570.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|421568570|ref|ZP_16014286.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421573168|ref|ZP_16018809.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421577841|ref|ZP_16023425.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421585433|ref|ZP_16030931.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|422028176|ref|ZP_16374492.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422033227|ref|ZP_16379309.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427556398|ref|ZP_18929815.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427573903|ref|ZP_18934406.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427595438|ref|ZP_18939320.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427620205|ref|ZP_18944202.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427643534|ref|ZP_18949090.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427658195|ref|ZP_18953815.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427663452|ref|ZP_18958716.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427680416|ref|ZP_18963609.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|436595163|ref|ZP_20512459.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436672773|ref|ZP_20517538.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|436801188|ref|ZP_20524781.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436806466|ref|ZP_20526674.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436813873|ref|ZP_20532054.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436846004|ref|ZP_20539062.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436847863|ref|ZP_20539834.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436859985|ref|ZP_20547806.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436867036|ref|ZP_20552436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436868663|ref|ZP_20553322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436876239|ref|ZP_20557720.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436890174|ref|ZP_20565760.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436898427|ref|ZP_20570425.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436901981|ref|ZP_20572864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436908546|ref|ZP_20575775.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436917066|ref|ZP_20580654.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436922705|ref|ZP_20584711.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436937822|ref|ZP_20592925.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436940092|ref|ZP_20594129.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436948420|ref|ZP_20598655.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436958503|ref|ZP_20603178.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436967319|ref|ZP_20607262.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436976263|ref|ZP_20611748.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|437000100|ref|ZP_20620572.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437008873|ref|ZP_20623608.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437014211|ref|ZP_20625412.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437026419|ref|ZP_20629782.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437037353|ref|ZP_20634209.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437053421|ref|ZP_20642502.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437061336|ref|ZP_20646890.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437063049|ref|ZP_20647778.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437071945|ref|ZP_20652200.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437083506|ref|ZP_20659180.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437092208|ref|ZP_20663734.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437098949|ref|ZP_20665636.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437119100|ref|ZP_20670721.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437131522|ref|ZP_20677425.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437139361|ref|ZP_20681771.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437142325|ref|ZP_20683671.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437149707|ref|ZP_20688276.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437158389|ref|ZP_20693298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437165068|ref|ZP_20697396.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437173681|ref|ZP_20701873.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|437184946|ref|ZP_20708673.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437234413|ref|ZP_20713705.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|437257273|ref|ZP_20715865.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437265058|ref|ZP_20720255.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437273592|ref|ZP_20724761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437284276|ref|ZP_20729480.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437318869|ref|ZP_20738150.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437320977|ref|ZP_20738456.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437342266|ref|ZP_20745282.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437395563|ref|ZP_20751345.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|437419331|ref|ZP_20754363.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437439024|ref|ZP_20757076.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|437463850|ref|ZP_20763404.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437472379|ref|ZP_20765478.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437487618|ref|ZP_20769954.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437512342|ref|ZP_20777263.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437529084|ref|ZP_20780288.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437557220|ref|ZP_20785093.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437569669|ref|ZP_20787977.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437582254|ref|ZP_20792305.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437599741|ref|ZP_20796990.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437620793|ref|ZP_20804283.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437630208|ref|ZP_20806209.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437656132|ref|ZP_20810640.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437674572|ref|ZP_20816571.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437689538|ref|ZP_20820122.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437703306|ref|ZP_20824432.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437727920|ref|ZP_20830361.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|437778146|ref|ZP_20836257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437809274|ref|ZP_20840570.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437817940|ref|ZP_20842824.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|437892847|ref|ZP_20849429.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438088888|ref|ZP_20860103.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438102068|ref|ZP_20864775.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438107429|ref|ZP_20866736.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|440762789|ref|ZP_20941840.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440766589|ref|ZP_20945578.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440771678|ref|ZP_20950591.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|445141911|ref|ZP_21385698.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445150453|ref|ZP_21389740.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|445204740|ref|ZP_21401318.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445227301|ref|ZP_21404226.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445241729|ref|ZP_21407727.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
gi|445328666|ref|ZP_21413153.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445345150|ref|ZP_21418024.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445358875|ref|ZP_21422907.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|61225723|sp|P0A1Q8.1|HEM3_SALTY RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|61225724|sp|P0A1Q9.1|HEM3_SALTI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|81599707|sp|Q5PKL7.1|HEM3_SALPA RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|226706297|sp|B5FN93.1|HEM3_SALDC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059000|sp|B5BIU8.1|HEM3_SALPK RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|238059001|sp|B4TNV3.1|HEM3_SALSV RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|254800257|sp|C0Q3B3.1|HEM3_SALPC RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|25292188|pir||AD0920 porphobilinogen deaminase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504500|emb|CAD09382.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139320|gb|AAO70887.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56130050|gb|AAV79556.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194710290|gb|ACF89511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197096200|emb|CAR61796.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197243154|gb|EDY25774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288774|gb|EDY28149.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197937697|gb|ACH75030.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205328154|gb|EDZ14918.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205340974|gb|EDZ27738.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|224470285|gb|ACN48115.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|312915057|dbj|BAJ39031.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321225457|gb|EFX50514.1| Porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322613018|gb|EFY09969.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617394|gb|EFY14294.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625614|gb|EFY22436.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627037|gb|EFY23830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631247|gb|EFY28010.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638280|gb|EFY34979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642784|gb|EFY39371.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646974|gb|EFY43476.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650361|gb|EFY46774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656348|gb|EFY52642.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657573|gb|EFY53843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665984|gb|EFY62165.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322666723|gb|EFY62900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671034|gb|EFY67164.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679259|gb|EFY75311.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681663|gb|EFY77690.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686010|gb|EFY81998.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323192636|gb|EFZ77864.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196502|gb|EFZ81652.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203746|gb|EFZ88767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323210748|gb|EFZ95624.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323215916|gb|EGA00649.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221409|gb|EGA05827.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227573|gb|EGA11729.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231758|gb|EGA15869.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236173|gb|EGA20250.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239590|gb|EGA23638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244314|gb|EGA28322.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249589|gb|EGA33501.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250319|gb|EGA34205.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256526|gb|EGA40257.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259776|gb|EGA43409.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265184|gb|EGA48682.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268387|gb|EGA51859.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|363552608|gb|EHL36892.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363553068|gb|EHL37340.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363559461|gb|EHL43627.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363559832|gb|EHL43983.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363570686|gb|EHL54615.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363572683|gb|EHL56573.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|363573453|gb|EHL57333.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|366054419|gb|EHN18774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366054464|gb|EHN18818.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035278]
gi|366056393|gb|EHN20717.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366066470|gb|EHN30637.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366070458|gb|EHN34568.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366081252|gb|EHN45201.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366081716|gb|EHN45657.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366828709|gb|EHN55590.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205588|gb|EHP19096.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|381295589|gb|EIC36699.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381299603|gb|EIC40674.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381300164|gb|EIC41228.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381307366|gb|EIC48223.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381316962|gb|EIC57699.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|392618231|gb|EIX00638.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392618363|gb|EIX00764.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392730228|gb|EIZ87474.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392736278|gb|EIZ93442.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392742680|gb|EIZ99766.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392743445|gb|EJA00517.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392751521|gb|EJA08470.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392753937|gb|EJA10857.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392755145|gb|EJA12059.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392768362|gb|EJA25118.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392770481|gb|EJA27208.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|392777185|gb|EJA33870.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|392779618|gb|EJA36282.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392780402|gb|EJA37055.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392785373|gb|EJA41952.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392791337|gb|EJA47825.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392802519|gb|EJA58731.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392805618|gb|EJA61741.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392806252|gb|EJA62363.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392807547|gb|EJA63617.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392808127|gb|EJA64180.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22462]
gi|392817106|gb|EJA73023.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392822631|gb|EJA78437.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392830957|gb|EJA86599.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392836361|gb|EJA91945.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392840867|gb|EJA96400.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|395982701|gb|EJH91900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395985603|gb|EJH94772.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395993713|gb|EJI02805.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|395999751|gb|EJI08767.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396005725|gb|EJI14699.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396007641|gb|EJI16586.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396012759|gb|EJI21654.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396020754|gb|EJI29593.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396021164|gb|EJI29991.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396026600|gb|EJI35366.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396026685|gb|EJI35450.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396034154|gb|EJI42856.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396039444|gb|EJI48070.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396045964|gb|EJI54554.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396047565|gb|EJI56137.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396055416|gb|EJI63902.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396060564|gb|EJI69007.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396060649|gb|EJI69091.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396072925|gb|EJI81232.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396073394|gb|EJI81696.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396075250|gb|EJI83525.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|402526089|gb|EJW33368.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402529077|gb|EJW36325.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402529859|gb|EJW37087.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402530078|gb|EJW37301.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|414012313|gb|EKS96235.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414013666|gb|EKS97542.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414013717|gb|EKS97591.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414027483|gb|EKT10711.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414028432|gb|EKT11620.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414030674|gb|EKT13766.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414041719|gb|EKT24277.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414042531|gb|EKT25068.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414046927|gb|EKT29232.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414055639|gb|EKT37524.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|434958357|gb|ELL51917.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434969405|gb|ELL62112.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434974693|gb|ELL67025.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434977359|gb|ELL69485.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434978145|gb|ELL70203.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434987124|gb|ELL78774.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434991114|gb|ELL82634.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434993703|gb|ELL85102.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435003908|gb|ELL94907.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435006669|gb|ELL97545.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435010994|gb|ELM01740.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435011267|gb|ELM01988.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|435013525|gb|ELM04160.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435020292|gb|ELM10705.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435030341|gb|ELM20372.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435031929|gb|ELM21875.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435034908|gb|ELM24764.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435044009|gb|ELM33708.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435046934|gb|ELM36543.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435055964|gb|ELM45369.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435056049|gb|ELM45453.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435059395|gb|ELM48673.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435061678|gb|ELM50899.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435067448|gb|ELM56489.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435072496|gb|ELM61415.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435085699|gb|ELM74247.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435086715|gb|ELM75245.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435088052|gb|ELM76510.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435089352|gb|ELM77789.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435089394|gb|ELM77830.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435103439|gb|ELM91529.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435108049|gb|ELM96026.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435110846|gb|ELM98753.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435112021|gb|ELM99904.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435123983|gb|ELN11466.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435126005|gb|ELN13417.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435130614|gb|ELN17843.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435131728|gb|ELN18935.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435142446|gb|ELN29347.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435147519|gb|ELN34282.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435151481|gb|ELN38122.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435154481|gb|ELN41061.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435158368|gb|ELN44770.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435160322|gb|ELN46602.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435167429|gb|ELN53353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435177477|gb|ELN62800.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435177787|gb|ELN63058.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178531|gb|ELN63739.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435185567|gb|ELN70426.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435192079|gb|ELN76633.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435193045|gb|ELN77546.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435196893|gb|ELN81212.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435198721|gb|ELN82877.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22558]
gi|435201664|gb|ELN85553.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435212773|gb|ELN95731.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435217879|gb|ELO00287.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435226038|gb|ELO07633.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435230688|gb|ELO11979.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435232508|gb|ELO13603.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435241039|gb|ELO21427.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245875|gb|ELO25903.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435250159|gb|ELO29901.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435256668|gb|ELO35963.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435263134|gb|ELO42201.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435264027|gb|ELO43049.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435272453|gb|ELO50854.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435278135|gb|ELO56007.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435281994|gb|ELO59633.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435283983|gb|ELO61495.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435291057|gb|ELO67944.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 16-16]
gi|435293737|gb|ELO70401.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435299361|gb|ELO75511.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435303366|gb|ELO79254.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435308071|gb|ELO83080.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435317059|gb|ELO90122.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435323973|gb|ELO95951.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435325058|gb|ELO96939.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435333531|gb|ELP04333.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|436420797|gb|ELP18654.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436421937|gb|ELP19777.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|436422512|gb|ELP20348.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|444850177|gb|ELX75281.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444856881|gb|ELX81900.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|444861255|gb|ELX86140.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444867075|gb|ELX91779.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444879460|gb|ELY03560.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444879720|gb|ELY03813.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444885755|gb|ELY09532.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|444890928|gb|ELY14219.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 436]
Length = 313
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 242
>gi|452122282|ref|YP_007472530.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|451911286|gb|AGF83092.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 313
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 242
>gi|402756999|ref|ZP_10859255.1| porphobilinogen deaminase [Acinetobacter sp. NCTC 7422]
Length = 348
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G D+AVHSMKDVP +L + L +RE
Sbjct: 108 EAALLDGRADLAVHSMKDVPMHLPEGLTLAVICEREDPLDAFVSNRYQHFDELPQGAKVG 167
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL++G+ A + A AGLK L + + + +
Sbjct: 168 TSSLRRKCQILQQRPDLEIIDLRGNVGTRLSKLDDGLYDAIILASAGLKRLGLADRIRHC 227
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGA+G+ C ++D + + + L H ET V ERAF L+G C
Sbjct: 228 LAPVLSLPAVGQGALGLECRADDGALLELIQPLQHAETSICVRAERAFNAYLEGGC 283
>gi|260767548|ref|ZP_05876484.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
gi|260617448|gb|EEX42631.1| porphobilinogen deaminase [Vibrio furnissii CIP 102972]
Length = 312
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYL-LDKTILP---- 31
E A++ G D+AVHSMKDVP TY LD+ LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDE--LPHGAI 125
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 126 VGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLQLEQRIR 185
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+++ + L AV QGA+GI C +D ++ L L+ +T V+CERA TL+G C
Sbjct: 186 SLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLEGGC 243
>gi|205354497|ref|YP_002228298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375125381|ref|ZP_09770545.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|205274278|emb|CAR39298.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629631|gb|EGE35974.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
Length = 318
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 72 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 131
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLEPRIRTA 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 192 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 247
>gi|204930376|ref|ZP_03221353.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320780|gb|EDZ05982.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 320
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 74 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 134 TSSLRRQCQLAERHPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 194 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 249
>gi|375129569|ref|YP_004991666.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218]
gi|315178740|gb|ADT85654.1| porphobilinogen deaminase [Vibrio furnissii NCTC 11218]
Length = 312
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYL-LDKTILP---- 31
E A++ G D+AVHSMKDVP TY LD+ LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYASLDE--LPHGAI 125
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 126 VGTCSLRRQCQLKEARPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEQRIR 185
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+++ + L AV QGA+GI C +D ++ L L+ +T V+CERA TL+G C
Sbjct: 186 SLIEPEQSLPAVGQGAVGIECRLDDARLRALLAPLSDADTTDRVLCERAMNLTLEGGC 243
>gi|406674766|ref|ZP_11081960.1| porphobilinogen deaminase [Aeromonas veronii AMC35]
gi|404628769|gb|EKB25544.1| porphobilinogen deaminase [Aeromonas veronii AMC35]
Length = 330
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + K I LP
Sbjct: 88 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAELPQGAVVG 147
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 148 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 208 IEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHAETRARVLTERAMNRALQGGC 263
>gi|378957091|ref|YP_005214578.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438149062|ref|ZP_20876470.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|445130923|ref|ZP_21381533.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|357207702|gb|AET55748.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|434938059|gb|ELL45084.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|444851257|gb|ELX76349.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 313
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLEPRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 242
>gi|200388118|ref|ZP_03214730.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605216|gb|EDZ03761.1| porphobilinogen deaminase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 320
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 74 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 134 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 194 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 249
>gi|123968087|ref|YP_001008945.1| porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
gi|158513952|sp|A2BPX7.1|HEM3_PROMS RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|123198197|gb|ABM69838.1| Porphobilinogen deaminase [Prochlorococcus marinus str. AS9601]
Length = 316
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 76/179 (42%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ G DIAVHS+KD+PT L + L C +RE
Sbjct: 67 EAQMLVGHADIAVHSLKDLPTNLPNGLKLGCITKREDPADALVVNKKNDCYKLENLPEGS 126
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ KL+ G + A AGLK L +
Sbjct: 127 IVGTSSLRRLAQLRNKYPHLVFKDIRGNVITRIEKLDAGEFDCIILAAAGLKRLGFESRI 186
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
I+P + L AV QGA+GI C S+DKK+ + + L + T Q + ERAFL L+G C
Sbjct: 187 HQIIPSEVSLHAVGQGALGIECKSDDKKVLEIISILEDKPTCQRCLAERAFLRELEGGC 245
>gi|83308731|emb|CAJ01641.1| porphobilinogen deaminase (ec 4.3.1.8) [Methylocapsa acidiphila]
Length = 293
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 74/174 (42%), Gaps = 47/174 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+ GE+DIAVHS KD+PT L + + L RE
Sbjct: 57 ALMRGEVDIAVHSAKDLPTSLPGEIAIAGYLPREDVRDAWISPKAAHPLELPAGAVVGTA 116
Query: 38 ---------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
GNV+ RL KL G + ATL ALAGLK L + + T +L
Sbjct: 117 SLRRGAMVKRLRPDLSIVLLRGNVETRLGKLAAGEVDATLLALAGLKRLGLEDRATAVLD 176
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + A QGAI I + D+ L + T A+ ERAFL LDGSC
Sbjct: 177 AGEFVPAAGQGAIAITLRAGDQAALDALAPVLDAATGAALAAERAFLHVLDGSC 230
>gi|289207199|ref|YP_003459265.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
gi|288942830|gb|ADC70529.1| porphobilinogen deaminase [Thioalkalivibrio sp. K90mix]
Length = 315
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 70/176 (39%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ DIAVHS+KDVP L +LP L RE
Sbjct: 65 EVAMLEDRADIAVHSVKDVPMELPADLVLPVILDREDPLDAFVSNTYAHVDELPQGARVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A L A AGLK L E +
Sbjct: 125 SSSLRRQCQLRARRPDLKITDLRGNVNTRLGKLDAGEYDAILLAAAGLKRLGFDERIRAR 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L L AV QGAI I C ND ++A + LN +T V ERAF L+G C
Sbjct: 185 LEPAVSLPAVGQGAIAIECRENDPEIAALIAPLNDRDTSDRVRAERAFNRRLEGGC 240
>gi|146280919|ref|YP_001171072.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
gi|145569124|gb|ABP78230.1| porphobilinogen deaminase [Pseudomonas stutzeri A1501]
Length = 314
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 68 ETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPPGSVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E + +
Sbjct: 128 TSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGERIRSS 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D+ L A QGA+GI C + D ++ L LNH T VV ERA L+G C
Sbjct: 188 IGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNGGC 243
>gi|393757676|ref|ZP_10346500.1| porphobilinogen deaminase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393165368|gb|EJC65417.1| porphobilinogen deaminase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 320
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++G +AVHS+KDVP L + LP ++R+
Sbjct: 72 ETALLDGRAHLAVHSLKDVPVVLPESFDLPIIMERDDPRDAFVSNTYPNLAALPAGAIVG 131
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A AGL+ L + E + +
Sbjct: 132 TSSLRRESQIRERYPHLDIRPLRGNVQTRLSKLDRGDYDAIILASAGLRRLELAERIRDY 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ I+D L A QGA+GI +A++L L H + + ERA L GSC
Sbjct: 192 ISIEDSLPAAGQGALGIEILKTRSDVAQWLAPLAHSTSHVCALAERAVSRALGGSC 247
>gi|90581042|ref|ZP_01236842.1| porphobilinogen deaminase [Photobacterium angustum S14]
gi|90437738|gb|EAS62929.1| porphobilinogen deaminase [Vibrio angustum S14]
Length = 310
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 67 EVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDELPQGAIVG 126
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ + GNV RLRK++EG A + A AGLK L M + + +
Sbjct: 127 TSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLKMEDRIRSE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D ++ + L +L+ + T V+CERA L G C
Sbjct: 187 IAPEVSLPAVGQGAVGIECRLDDTRVRQLLAALSDQATTTRVLCERAMNNYLQGGC 242
>gi|455737393|ref|YP_007503659.1| Porphobilinogen deaminase [Morganella morganii subsp. morganii KT]
gi|455418956|gb|AGG29286.1| Porphobilinogen deaminase [Morganella morganii subsp. morganii KT]
Length = 313
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 ELALLENRADIAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYDSVDALPPGSIVG 126
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 127 TSSLRRQCQLRERRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLKRLKLDERIRCA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP ++ L AV QGA+GI C +D++ L +LNH +T V ERA L+G C
Sbjct: 187 LPPEESLPAVGQGAVGIECRLDDERTRSLLSALNHAQTDICVRAERAMNTRLEGGC 242
>gi|27117223|emb|CAD48146.1| porphobilinogen deaminase [Bacillus megaterium]
Length = 310
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++ EID+AVHSMKD+P L + + C RE
Sbjct: 65 EQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGL + +++ VT
Sbjct: 125 TSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTVTQ 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + AV QGA+ I C ND ++ L +LNH+ET +AV ER FL ++G C
Sbjct: 185 YLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGC 241
>gi|391347560|ref|XP_003748028.1| PREDICTED: porphobilinogen deaminase-like [Metaseiulus
occidentalis]
Length = 371
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 80/180 (44%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD---------------KTILPCN------------- 33
E AL E+D+ VHS+KD+PT L D + P N
Sbjct: 94 ENALTAEEVDLVVHSLKDLPTTLPDGLSIGAILEREEPEDAVVFPANSTARSLSDLDDGA 153
Query: 34 ------------LQRE----------GNVQARLRKL-NEGVIQATLSALAGLKCLNMTEN 70
L+R+ GN+ RLRKL N+ V A + A+AGLK L +
Sbjct: 154 TIGTSSLRRIAQLRRKFSDFEFKSVRGNLSTRLRKLDNDKVYDALVLAVAGLKRLGWNDR 213
Query: 71 VTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ L D L AV QGAI + C ++D + + L LNH +T + ER+F+ L+G C
Sbjct: 214 ISEKLSPDQCLYAVGQGAIAVECRTSDAVVTELLRDLNHNDTALRCLAERSFMKALEGGC 273
>gi|308174513|ref|YP_003921218.1| porphobilinogen deaminase [Bacillus amyloliquefaciens DSM 7]
gi|384160344|ref|YP_005542417.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208]
gi|384165281|ref|YP_005546660.1| porphobilinogen deaminase [Bacillus amyloliquefaciens LL3]
gi|384169422|ref|YP_005550800.1| porphobilinogen deaminase [Bacillus amyloliquefaciens XH7]
gi|307607377|emb|CBI43748.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens DSM 7]
gi|328554432|gb|AEB24924.1| porphobilinogen deaminase [Bacillus amyloliquefaciens TA208]
gi|328912836|gb|AEB64432.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens LL3]
gi|341828701|gb|AEK89952.1| porphobilinogen deaminase [Bacillus amyloliquefaciens XH7]
Length = 313
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++ EID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKEGGIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V +
Sbjct: 125 TSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKDDVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C +D+++ K E T++ V ERAFL ++G C
Sbjct: 185 FLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTKRTVAAERAFLHAMEGGC 241
>gi|437976211|ref|ZP_20853007.1| porphobilinogen deaminase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435339143|gb|ELP08183.1| porphobilinogen deaminase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
Length = 260
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 14 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVG 73
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 74 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLESRIRTA 133
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 134 LPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEGGC 189
>gi|390440021|ref|ZP_10228378.1| Porphobilinogen deaminase [Microcystis sp. T1-4]
gi|425470603|ref|ZP_18849467.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9701]
gi|389836575|emb|CCI32502.1| Porphobilinogen deaminase [Microcystis sp. T1-4]
gi|389883722|emb|CCI35911.1| Porphobilinogen deaminase [Microcystis aeruginosa PCC 9701]
Length = 319
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQR------------------------- 36
E +++ ID+AVHS+KD+PT L + IL C +R
Sbjct: 71 ELGMLDRSIDLAVHSLKDLPTNLPEGLILGCVTERVNPADALVVNSQNQDYQLDSLPAGA 130
Query: 37 -------------------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G + A+AGL+ L + + V
Sbjct: 131 VVGTSSLRRLAQLRYHYPHLTFKDVRGNVNTRLAKLDAGEYDGIILAVAGLERLGLGDRV 190
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D ++ + L L H +R ERAFL L G C
Sbjct: 191 HQVIPAEISLHAVGQGALGIECRDGDAEVLQVLKVLEHAPSRDRCYAERAFLRELQGGC 249
>gi|410086298|ref|ZP_11283010.1| Porphobilinogen deaminase [Morganella morganii SC01]
gi|421491504|ref|ZP_15938867.1| HEMC [Morganella morganii subsp. morganii KT]
gi|400193938|gb|EJO27071.1| HEMC [Morganella morganii subsp. morganii KT]
gi|409767143|gb|EKN51223.1| Porphobilinogen deaminase [Morganella morganii SC01]
Length = 361
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 115 ELALLENRADIAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNHYDSVDALPPGSIVG 174
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 175 TSSLRRQCQLRERRPDLVIRDLRGNVGTRLGKLDNGDYDAIILAVAGLKRLKLDERIRCA 234
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP ++ L AV QGA+GI C +D++ L +LNH +T V ERA L+G C
Sbjct: 235 LPPEESLPAVGQGAVGIECRLDDERTRSLLSALNHAQTDICVRAERAMNTRLEGGC 290
>gi|406672588|ref|ZP_11079813.1| porphobilinogen deaminase [Bergeyella zoohelcum CCUG 30536]
gi|405587132|gb|EKB60860.1| porphobilinogen deaminase [Bergeyella zoohelcum CCUG 30536]
Length = 304
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL++GEIDIAVHS+KDVPT + + L L+R+
Sbjct: 64 ALLHGEIDIAVHSLKDVPTQMPENLKLIAYLERDFPEDVLVRSPRAKDKPLHELKVATSS 123
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RL+KLN+G+ ATL +LAGLK L + + + LP
Sbjct: 124 LRRRAFWKKEFPNAEFTDIRGNVQTRLQKLNDGLADATLFSLAGLKRLALNIDYES-LPF 182
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG + IA + ++ + +NH T+ V ER FL T++G C
Sbjct: 183 --MVSAPSQGVVTIAGHEKNVEVNTIVEKINHLPTQICVEIERTFLQTMEGGC 233
>gi|294501421|ref|YP_003565121.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
gi|294351358|gb|ADE71687.1| porphobilinogen deaminase [Bacillus megaterium QM B1551]
Length = 310
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++ EID+AVHSMKD+P L + + C RE
Sbjct: 65 EQAMLDKEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGL + +++ VT
Sbjct: 125 TSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNEDYDAIILAAAGLSRMGWSKDTVTQ 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + AV QGA+ I C ND ++ L +LNH+ET +AV ER FL ++G C
Sbjct: 185 YLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGC 241
>gi|386019216|ref|YP_005937240.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166]
gi|327479188|gb|AEA82498.1| porphobilinogen deaminase [Pseudomonas stutzeri DSM 4166]
Length = 312
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 66 ETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPPGSVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E + +
Sbjct: 126 TSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGERIRSS 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D+ L A QGA+GI C + D ++ L LNH T VV ERA L+G C
Sbjct: 186 IGVDESLPAGGQGAVGIECRTGDSEVHALLACLNHAPTATRVVAERALNKRLNGGC 241
>gi|339492637|ref|YP_004712930.1| porphobilinogen deaminase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338800009|gb|AEJ03841.1| porphobilinogen deaminase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 312
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 66 ETALLENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDSLDALPPGSVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E + +
Sbjct: 126 TSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGERIRSS 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D+ L A QGA+GI C + D ++ L LNH T VV ERA L+G C
Sbjct: 186 IGVDESLPAGGQGAVGIECRTGDSEVHALLSCLNHAPTATRVVAERALNKRLNGGC 241
>gi|407698365|ref|YP_006823152.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Black Sea
11']
gi|407247512|gb|AFT76697.1| porphobilinogen deaminase [Alteromonas macleodii str. 'Black Sea
11']
Length = 312
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E A++ G DIAVHSMKDVP D + LP
Sbjct: 71 EIAMLEGRADIAVHSMKDVPVEFPEGFGLHAICERENPFDAFVSNHHDSLDALPQGAVVG 130
Query: 32 -------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C +++ GNV RL KL+ G A + A AGL L M +
Sbjct: 131 TSSLRRQCQIRKYRPDLVIKDLRGNVNTRLAKLDAGDYDAIILACAGLIRLEMESRIRMS 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP D L AV QGA+GI C ++D+++ L +LNH +T V ERA L+G C
Sbjct: 191 LPADISLPAVGQGAVGIECRNDDEELISLLQALNHSDTNTRVTAERAMNERLEGGC 246
>gi|313673928|ref|YP_004052039.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940684|gb|ADR19876.1| hydroxymethylbilane synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 308
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 71/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ALI E D+AVHSMKDVP L D+ + N RE
Sbjct: 65 ENALIENEADLAVHSMKDVPVELPDELEIYVNPHRESPFDAFLSVKYNNLDELPRGAKLG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL EG A + A AGL LN+ E
Sbjct: 125 TSSLRRKVQISRIRPDIEITDLRGNVDTRIRKLTEGTFDAIILARAGLNRLNLLEWAKYT 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+++ +V QG +GI +D ++ L + E+T ERAFL L+G C
Sbjct: 185 FDDSEIVPSVCQGTLGIEVRKDDDRIKNILKFMKDEKTEIVTRAERAFLRRLEGGC 240
>gi|154174368|ref|YP_001408386.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
gi|259647805|sp|A7GYU4.1|HEM3_CAMC5 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|112802609|gb|EAT99953.1| porphobilinogen deaminase [Campylobacter curvus 525.92]
Length = 311
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+++++G+ IAVHS+KDVP LD +L RE
Sbjct: 65 EDSMLSGQTHIAVHSLKDVPVAFLDGLVLAAICSREDVRDAMISQRYVKFDDLPQSAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG A + A+AG+ LN+ + V +I
Sbjct: 125 TTSLRRKMQLLRMRPDLNIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNLADEVAHI 184
Query: 75 LPID--DMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D M A+ QGA+G+ +D ++ + + LN E + ER F+ L+G C
Sbjct: 185 YPFDIAQMTPAMGQGALGVEAV-DDAQILEKIKFLNDERSVIETRVERDFVTLLEGGC 241
>gi|82703803|ref|YP_413369.1| porphobilinogen deaminase [Nitrosospira multiformis ATCC 25196]
gi|82411868|gb|ABB75977.1| hydroxymethylbilane synthase [Nitrosospira multiformis ATCC 25196]
Length = 321
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP--------------------TYLLDK----TILP------ 31
E+AL +G DIAVHSMKDVP ++ +K LP
Sbjct: 71 EQALEDGRADIAVHSMKDVPMDMPAGFALAAITEREDPRDAFVSNKYARLDALPPGSVVG 130
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RLRKL+EG A + A AGLK L + E +T +
Sbjct: 131 TSSLRRESQLRARFPHLQVQPLRGNVQTRLRKLDEGQFAAIILAAAGLKRLGLAERITAL 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+GI C ++ + K + L+H T + V ERA L GSC
Sbjct: 191 LSPDLSLPAVGQGALGIECRADRSDLIKLMEPLHHIPTARCVEAERAMSRALGGSC 246
>gi|253828009|ref|ZP_04870894.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313142581|ref|ZP_07804774.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|253511415|gb|EES90074.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
gi|313131612|gb|EFR49229.1| porphobilinogen deaminase [Helicobacter canadensis MIT 98-5491]
Length = 314
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EE ++ GEID+AVHS+KDVP ++ L +RE
Sbjct: 65 EELMLKGEIDVAVHSLKDVPVEFVEGLGLAAITKREDVRDSFLSFKYKNLQELPQGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL++L EG A + A AG+ L + V I
Sbjct: 125 TTSLRRVMQINTLRKDLDCMSLRGNVQTRLKRLKEGDFDAIILAQAGVNRLGIEGEVDCI 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P+D M+ A+ Q A+GI C D ++AK L LN + ER F+ TL+G C
Sbjct: 185 APLDFMIPAMGQAALGIECRV-DSEVAKLLEFLNDTKASFETSAEREFVKTLEGGC 239
>gi|242373962|ref|ZP_04819536.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
gi|242348316|gb|EES39918.1| hydroxymethylbilane synthase [Staphylococcus epidermidis M23864:W1]
Length = 308
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N +ID+A+HS+KDVP+ + + L C RE
Sbjct: 68 LFNKDIDMAIHSLKDVPSIIPEGLTLGCIPDREVPFDAYISKNHTPLSELPEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL KL A + A AGL+ + +++ VT L
Sbjct: 128 LRRGAQILSKYPHLEIKWIRGNIDTRLNKLETEDYDAIILAAAGLRRMGWSDDIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+D+++ L +++ E Q V ER FL +DGSC
Sbjct: 188 KDILLPAIGQGALGIECRSDDEELLDLLKKVHNHEVAQCVTAERTFLSEMDGSC 241
>gi|330804637|ref|XP_003290299.1| porphobilinogen deaminase [Dictyostelium purpureum]
gi|325079586|gb|EGC33179.1| porphobilinogen deaminase [Dictyostelium purpureum]
Length = 319
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 54/183 (29%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK-----------------------------TILP- 31
E+ ++NG +D+AVHS+KD+PT L D + LP
Sbjct: 68 EDMMLNGSVDLAVHSLKDIPTRLPDGLKLGAITKRYSTSDAFIANVKKHGKDCKLSDLPN 127
Query: 32 ------CNLQR----------------EGNVQARLRKLN--EGVIQATLSALAGLKCLNM 67
+L+R GN+ R KL+ + + A+AGL+ +N+
Sbjct: 128 GALIGSSSLRRVAQLKKSYPHLQFKDIRGNLNTRFNKLDAVDSEYDGMILAVAGLERMNL 187
Query: 68 TENVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLD 127
T+ ++ ++P + L AV QGA+GI C ND + K L LNH E+ ER+ L L+
Sbjct: 188 TDRISQVIPDEISLYAVGQGALGIECKENDPFIEKILEPLNHSESMMRCKAERSMLRELE 247
Query: 128 GSC 130
G C
Sbjct: 248 GGC 250
>gi|295706769|ref|YP_003599844.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
gi|294804428|gb|ADF41494.1| porphobilinogen deaminase [Bacillus megaterium DSM 319]
Length = 310
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++ EID+AVHSMKD+P L + + C RE
Sbjct: 65 EQAMLDEEIDMAVHSMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGL + + + VT
Sbjct: 125 TSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNKDYDAIILAAAGLSRMGWSRDTVTQ 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + + AV QGA+ I C ND ++ L +LNH+ET +AV ER FL ++G C
Sbjct: 185 YLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGGC 241
>gi|315634981|ref|ZP_07890262.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
gi|315476243|gb|EFU66994.1| hydroxymethylbilane synthase [Aggregatibacter segnis ATCC 33393]
Length = 346
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TYLLDKTILP----- 31
E AL+N E DIAVHSMKDVP TY + P
Sbjct: 105 ENALLNNEADIAVHSMKDVPMQFPEGLGLSVICKREDPRDAFVSNTYRTLAELPPGAIVG 164
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL L + + +T+
Sbjct: 165 TSSLRRQCQLKALRPDLEIRSLRGNVGTRLSKLDNGDFDAIILASAGLIRLGLADRITSF 224
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ++ L A QGA+GI C +ND+++ + L L ET V+ ERA L G C
Sbjct: 225 IEVEQSLPAAGQGAVGIECRTNDEQVKQLLAPLADVETTYCVLAERAMNNRLQGGC 280
>gi|163748699|ref|ZP_02155952.1| porphobilinogen deaminase [Shewanella benthica KT99]
gi|161331809|gb|EDQ02613.1| porphobilinogen deaminase [Shewanella benthica KT99]
Length = 309
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ DIAVHS+KDVP D K+I LP
Sbjct: 67 EVAILEDRADIAVHSIKDVPVDFPDGLGLEVICEREDPRDAFVSNDYKSIGDLPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E +T+
Sbjct: 127 TSSLRRQCQIRGMRPDLKIIDLRGNVGTRLGKLDAGNYDAIILAAAGLKRLKLEERITSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D L A QGA+GI C ++++++ L L H ETR V ERA L+G C
Sbjct: 187 ISTEDSLPANGQGAVGIECRTDNERVKALLAPLEHAETRFRVTAERAMNTHLEGGC 242
>gi|443625341|ref|ZP_21109789.1| putative Porphobilinogen deaminase 2 [Streptomyces
viridochromogenes Tue57]
gi|443341258|gb|ELS55452.1| putative Porphobilinogen deaminase 2 [Streptomyces
viridochromogenes Tue57]
Length = 319
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 51/179 (28%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
+ALI GE+D AVHS+KD+PT + +L QRE
Sbjct: 66 DALIRGEVDFAVHSLKDLPTTQPAELVLAAVPQREDPRDVIVARDALKFTDLPRGARIGT 125
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ + +G + A + A AGL + + V
Sbjct: 126 GSPRRMAQLNAYARSHGLDIETVPIRGNVDTRIGYVRDGELDAVVLAAAGLNRIGRIDEV 185
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
T+ L +D +L A QGA+ I CT+++ + LG L+ TR AV ER+ L L+ C
Sbjct: 186 TDFLSVDTVLPAPGQGALAIECTADNADLIAALGELDDPFTRVAVTAERSLLAALEAGC 244
>gi|395769140|ref|ZP_10449655.1| porphobilinogen deaminase [Streptomyces acidiscabies 84-104]
Length = 319
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 51/179 (28%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
+AL+ GE+D AVHS+KD+PT + L RE
Sbjct: 66 DALLAGEVDFAVHSLKDLPTAQPEGLTLAAVPVREDPRDVLVARDALKLTDLPRAARIGT 125
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+R +++G + A + A AGL + + V
Sbjct: 126 GSPRRAAQLNAYARAHGLEFELVAIRGNVDTRIRYVHDGELDAVVLAAAGLNRMGRADEV 185
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
T+ L ID +L A QGA+ I C ++D + LG L+ TR AV ER+ L L+ C
Sbjct: 186 TDFLSIDAVLPAPGQGALAIECAASDADLVAALGELDDPFTRAAVTAERSLLAALEAGC 244
>gi|284799715|ref|ZP_05984671.2| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
gi|284797316|gb|EFC52663.1| hydroxymethylbilane synthase [Neisseria subflava NJ9703]
Length = 323
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 81 EQALYDGRADLAVHSIKDVPMDLPEGFTLAAISERANPFDAFVSNQYARLEEMPKGAVVG 140
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + E + I
Sbjct: 141 TSSLRREAQLRVRYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELDERIRMI 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ + + + L LNH+ T V ERA L GSC
Sbjct: 201 LSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGGSC 256
>gi|71892349|ref|YP_278083.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|123747812|sp|Q491Z6.1|HEM3_BLOPB RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|71796455|gb|AAZ41206.1| porphobilinogen deaminase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 300
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E ALIN DIAVHSMKD+ L D+ LP
Sbjct: 67 EHALINFRADIAVHSMKDITVPLPDELTLPVLCKRNDPRDAFVSLKYPNIDTLPIGSVIG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GN+ RL+KL G A + A+AGL+ L + E +
Sbjct: 127 TSSLRRQCQIRAHRPDLVVSNLRGNIDTRLKKLQYGQYDAIVLAVAGLQRLQLHEYIRVH 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+L A+ QG I I C SND + L L H+ET V ERA L+ C
Sbjct: 187 IDPSDLLPAMGQGVIAIECRSNDADILSLLSPLYHQETSFRVRAERAVTTYLESYC 242
>gi|238798585|ref|ZP_04642061.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
gi|238717541|gb|EEQ09381.1| Porphobilinogen deaminase [Yersinia mollaretii ATCC 43969]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL++G DIAVHSMKDVP + TI LP
Sbjct: 67 ELALLDGRADIAVHSMKDVPIAFPEGLGLVTICERDDPRDAFVSSHYAHLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLRERRPDLIIRDLRGNVGTRLAKLDNGDYHAIILAVAGLKRLGLETRIRYA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C +D + L LNH +T V ERA L+G C
Sbjct: 187 MPAEESLPAVGQGAVGIECRLDDDVTRQLLAPLNHRDTELRVCAERAMNTRLEGGC 242
>gi|411011020|ref|ZP_11387349.1| porphobilinogen deaminase [Aeromonas aquariorum AAK1]
Length = 309
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 67 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFTAIDELPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 127 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 187 IEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRALQGGC 242
>gi|392422795|ref|YP_006459399.1| porphobilinogen deaminase [Pseudomonas stutzeri CCUG 29243]
gi|390984983|gb|AFM34976.1| porphobilinogen deaminase [Pseudomonas stutzeri CCUG 29243]
Length = 312
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 66 ETALMENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNHFDDLDALPPGSVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E + +
Sbjct: 126 TSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGERIRSS 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D+ L A QGA+GI C + D ++ L LNH T VV ERA L+G C
Sbjct: 186 ISVDESLPAGGQGAVGIECRTTDSELHALLECLNHAPTATRVVAERALNKRLNGGC 241
>gi|110598700|ref|ZP_01386964.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
gi|110339694|gb|EAT58205.1| porphobilinogen deaminase [Chlorobium ferrooxidans DSM 13031]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ LI EID+AVHS+KDVPT + I+ +RE
Sbjct: 66 EKHLIAKEIDLAVHSLKDVPTGTPEGLIITSFTEREDTRDVIISKGGVKLKELPANAKMA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R +K + G A + A AG+ LN ++ ++ I
Sbjct: 126 TSSLRRMSQLLSLRPDLDIRDIRGNLNTRFQKFDAGEFDAMMLAYAGVYRLNFSDRISEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + ML AV QGA+GI +D++ + + LNH T ERA L L G C
Sbjct: 186 LPHEVMLPAVGQGALGIETRVDDEQTREIVRILNHSNTEYCCRAERALLRHLQGGC 241
>gi|319639194|ref|ZP_07993945.1| porphobilinogen deaminase [Neisseria mucosa C102]
gi|317399378|gb|EFV80048.1| porphobilinogen deaminase [Neisseria mucosa C102]
Length = 325
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 81 EQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPKGAVVG 140
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + E + I
Sbjct: 141 TSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELDERIRMI 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ + + + L LNH+ T V ERA L GSC
Sbjct: 201 LSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGGSC 256
>gi|157833452|pdb|1PDA|A Chain A, Structure Of Porphobilinogen Deaminase Reveals A Flexible
Multidomain Polymerase With A Single Catalytic Site
gi|41664|emb|CAA27813.1| unnamed protein product [Escherichia coli]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 77/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G+C
Sbjct: 185 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGAC 242
>gi|158337071|ref|YP_001518246.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
gi|158307312|gb|ABW28929.1| porphobilinogen deaminase [Acaryochloris marina MBIC11017]
Length = 314
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPT-----------------------------YLLDK----- 27
E +++ E D+AVHS+KD+PT Y LD
Sbjct: 63 EVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLPEGA 122
Query: 28 TILPCNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
I +L+R GN+ RL+KL+EG + A+AGL+ L + +
Sbjct: 123 VIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFGDRI 182
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C D+++ ++ +L HE + ER+FL L+G C
Sbjct: 183 HQVIPANISLHAVGQGALGIECREGDEEIMAFIKALEHEPSAHRCTAERSFLHELEGGC 241
>gi|375363228|ref|YP_005131267.1| porphobilinogen deaminase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421730781|ref|ZP_16169907.1| porphobilinogen deaminase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346037|ref|YP_007444668.1| porphobilinogen deaminase [Bacillus amyloliquefaciens IT-45]
gi|371569222|emb|CCF06072.1| porphobilinogen deaminase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407074935|gb|EKE47922.1| porphobilinogen deaminase [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449849795|gb|AGF26787.1| porphobilinogen deaminase [Bacillus amyloliquefaciens IT-45]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++ EID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKEGGIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V +
Sbjct: 125 TSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKDDVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C +D+++ K E T++ V ERAFL ++G C
Sbjct: 185 FLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEGGC 241
>gi|301029020|ref|ZP_07192174.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
gi|432566189|ref|ZP_19802744.1| porphobilinogen deaminase [Escherichia coli KTE51]
gi|299878014|gb|EFI86225.1| porphobilinogen deaminase [Escherichia coli MS 196-1]
gi|431089445|gb|ELD95259.1| porphobilinogen deaminase [Escherichia coli KTE51]
Length = 320
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPT--------------------YLLDKT----ILPC----- 32
E AL+ DIAVHSMKDVP ++ D LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSDNYDSLDALPAGSIVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 134 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 194 LPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|423199350|ref|ZP_17185933.1| porphobilinogen deaminase [Aeromonas hydrophila SSU]
gi|404629345|gb|EKB26106.1| porphobilinogen deaminase [Aeromonas hydrophila SSU]
Length = 330
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 88 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFTAIDELPQGAVVG 147
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 148 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 208 IEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRALQGGC 263
>gi|416115105|ref|ZP_11593973.1| Porphobilinogen deaminase [Campylobacter concisus UNSWCD]
gi|384577897|gb|EIF07171.1| Porphobilinogen deaminase [Campylobacter concisus UNSWCD]
Length = 311
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E++++ GE DIAVHS+KDVP + L RE
Sbjct: 65 EDSMLKGETDIAVHSLKDVPVVFPEGLKLAAICSREDTRDAMISEKFAKFSDLPHGAKVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG A + A+AG+ LN+ VT+I
Sbjct: 125 TTSLRRKMQLLIMRPDLEIISLRGNVQTRLRKLKEGEFDAIILAMAGINRLNIKAEVTHI 184
Query: 75 --LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D+M+ A+ QGA+G+ ++K++ K + LN E ER F+ L+G C
Sbjct: 185 YTFGFDEMIPAMGQGALGVEA-RDEKQILKQIDFLNDENAVIETTIERDFVSVLEGGC 241
>gi|225075410|ref|ZP_03718609.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
gi|224953228|gb|EEG34437.1| hypothetical protein NEIFLAOT_00415 [Neisseria flavescens
NRL30031/H210]
Length = 325
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 81 EQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPKGAIVG 140
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + E + I
Sbjct: 141 TSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELDERIRMI 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ + + + L LNH+ T V ERA L GSC
Sbjct: 201 LSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGGSC 256
>gi|241759313|ref|ZP_04757419.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
gi|241320449|gb|EER56746.1| hydroxymethylbilane synthase [Neisseria flavescens SK114]
Length = 325
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 81 EQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPKGAIVG 140
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + E + I
Sbjct: 141 TSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELDERIRMI 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ + + + L LNH+ T V ERA L GSC
Sbjct: 201 LSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGGSC 256
>gi|386393655|ref|ZP_10078436.1| porphobilinogen deaminase [Desulfovibrio sp. U5L]
gi|385734533|gb|EIG54731.1| porphobilinogen deaminase [Desulfovibrio sp. U5L]
Length = 310
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTIL--------PCN-------------------- 33
EEAL++G D+AVHSMKDVP ++ PC+
Sbjct: 66 EEALLDGRADLAVHSMKDVPAEQPQGLVVGIVPEREDPCDTLLSVAYAGLPALPAGARVG 125
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R+ GN+ R+ KL G+ A + A AGL L +T
Sbjct: 126 TSSLRRKAQLMALRPDLSIIDLRGNLDTRVGKLLNGLFDAIVVATAGLNRLGLTAPQAVR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A AQGA+G+ ++D + A L +H ++R AV ER FL L+G C
Sbjct: 186 LGPPEFLPAAAQGALGLEYRTDDPETAAMLAFFDHPDSRDAVAAERGFLARLEGGC 241
>gi|394991900|ref|ZP_10384696.1| porphobilinogen deaminase [Bacillus sp. 916]
gi|452856468|ref|YP_007498151.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|393807259|gb|EJD68582.1| porphobilinogen deaminase [Bacillus sp. 916]
gi|452080728|emb|CCP22493.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++ EID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDDIKEGGIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V +
Sbjct: 125 TSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKDDVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C +D+++ K E T++ V ERAFL ++G C
Sbjct: 185 FLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEGGC 241
>gi|432866682|ref|ZP_20089019.1| porphobilinogen deaminase [Escherichia coli KTE146]
gi|431400805|gb|ELG84169.1| porphobilinogen deaminase [Escherichia coli KTE146]
Length = 320
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP TI LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQSLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVG 133
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 134 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 194 LPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|66043333|ref|YP_233174.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae B728a]
gi|289677629|ref|ZP_06498519.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae FF5]
gi|302187597|ref|ZP_07264270.1| porphobilinogen deaminase [Pseudomonas syringae pv. syringae 642]
gi|422620714|ref|ZP_16689389.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str.
M301072]
gi|422639882|ref|ZP_16703310.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7]
gi|422672656|ref|ZP_16732019.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str.
M302273]
gi|424069962|ref|ZP_17807404.1| porphobilinogen deaminase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|440719913|ref|ZP_20900336.1| porphobilinogen deaminase [Pseudomonas syringae BRIP34876]
gi|440728081|ref|ZP_20908301.1| porphobilinogen deaminase [Pseudomonas syringae BRIP34881]
gi|440743464|ref|ZP_20922773.1| porphobilinogen deaminase [Pseudomonas syringae BRIP39023]
gi|443640787|ref|ZP_21124637.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B64]
gi|75504025|sp|Q500N6.1|HEM3_PSEU2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|63254040|gb|AAY35136.1| hydroxymethylbilane synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330901069|gb|EGH32488.1| porphobilinogen deaminase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330952274|gb|EGH52534.1| porphobilinogen deaminase [Pseudomonas syringae Cit 7]
gi|330970393|gb|EGH70459.1| porphobilinogen deaminase [Pseudomonas syringae pv. aceris str.
M302273]
gi|408001686|gb|EKG41981.1| porphobilinogen deaminase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|440362412|gb|ELP99609.1| porphobilinogen deaminase [Pseudomonas syringae BRIP34881]
gi|440367153|gb|ELQ04222.1| porphobilinogen deaminase [Pseudomonas syringae BRIP34876]
gi|440375229|gb|ELQ11939.1| porphobilinogen deaminase [Pseudomonas syringae BRIP39023]
gi|443280804|gb|ELS39809.1| Porphobilinogen deaminase [Pseudomonas syringae pv. syringae B64]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHSMKDVP L C +RE
Sbjct: 67 ETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQLPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+HE+T V+ ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGC 242
>gi|213971710|ref|ZP_03399816.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
gi|301386723|ref|ZP_07235141.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato Max13]
gi|302062167|ref|ZP_07253708.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato K40]
gi|302130377|ref|ZP_07256367.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213923528|gb|EEB57117.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato T1]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHSMKDVP L C +RE
Sbjct: 67 ETALLEDSADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+HE+T V+ ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGC 242
>gi|154686951|ref|YP_001422112.1| porphobilinogen deaminase [Bacillus amyloliquefaciens FZB42]
gi|384266361|ref|YP_005422068.1| porphobilinogen deaminase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899397|ref|YP_006329693.1| hydroxymethylbilane synthase [Bacillus amyloliquefaciens Y2]
gi|166201493|sp|A7Z7A5.1|HEM3_BACA2 RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|154352802|gb|ABS74881.1| HemC [Bacillus amyloliquefaciens FZB42]
gi|380499714|emb|CCG50752.1| porphobilinogen deaminase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173507|gb|AFJ62968.1| hydroxymethylbilane synthase [Bacillus amyloliquefaciens Y2]
Length = 313
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++ EID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQALLHQEIDMAVHSMKDMPAVLPEGLVIGCIPKREDPRDALISKGHQKLDGIKEGGIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V +
Sbjct: 125 TSSLRRSAQILAERPDLTIKWIRGNIDTRLQKLETEDYDAIILAAAGLSRMGWKDDVVSE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C +D+++ K E T++ V ERAFL ++G C
Sbjct: 185 FLEPDRCLPAVGQGALAIECRESDEELLKLFAQFTDEYTQRTVAAERAFLHAMEGGC 241
>gi|424065289|ref|ZP_17802769.1| porphobilinogen deaminase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408003551|gb|EKG43723.1| porphobilinogen deaminase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 313
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHSMKDVP L C +RE
Sbjct: 67 ETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQLPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+HE+T V+ ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGC 242
>gi|257465324|ref|ZP_05629695.1| porphobilinogen deaminase [Actinobacillus minor 202]
gi|257450984|gb|EEV25027.1| porphobilinogen deaminase [Actinobacillus minor 202]
Length = 308
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILP---- 31
E AL+ DIAVHSMKDVP LDK LP
Sbjct: 66 ELALLENRADIAVHSMKDVPMTFPEGLGLAVICEREDPRDAFVSNQYQSLDK--LPKGAV 123
Query: 32 ---CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A AGL L M E +
Sbjct: 124 VGTSSLRRQCQLMAAYPHLEIKSLRGNVGTRLSKLDNGEYDAIILASAGLIRLGMPERIR 183
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + ++ L A QGA+GI +D+++ YL LNH+ T V+ ERA L G C
Sbjct: 184 SFISVEQSLPAAGQGAVGIETRLDDQRVLSYLAKLNHQPTAYRVIAERAMNAHLQGGC 241
>gi|407451291|ref|YP_006723015.1| porphobilinogen deaminase [Riemerella anatipestifer RA-CH-1]
gi|403312275|gb|AFR35116.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-CH-1]
Length = 306
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+N +IDIAVHS+KDVPT L L L+R+
Sbjct: 69 ALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDQPLEKLTIATSS 128
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RL+KL +G+ ATL +LAGLK + + + LP
Sbjct: 129 LRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMALDIPYEH-LPF 187
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG + +A +++ ++ + + ++NH +T+ V ER FL L+G C
Sbjct: 188 --MISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEGGC 238
>gi|430763077|ref|YP_007218934.1| Porphobilinogen deaminase [Thioalkalivibrio nitratireducens DSM
14787]
gi|430012701|gb|AGA35453.1| Porphobilinogen deaminase [Thioalkalivibrio nitratireducens DSM
14787]
Length = 310
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHS+KDVP L ++ +LP L+RE
Sbjct: 66 EMALLEDRADIAVHSVKDVPMELPEQLVLPVILEREDPLDAFVSNDHADLDALPEGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL +L+ G A L A AGLK L E +
Sbjct: 126 SSSLRRQCQLRARRPDLVITDLRGNVNTRLARLDAGDYDAILLAAAGLKRLGFEERIRAR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ L AV QGAI I C D ++ + + LNH T V ERAF L+G C
Sbjct: 186 IEPGISLPAVGQGAIAIECRDGDTEVIELISGLNHAATADRVRAERAFNRRLEGGC 241
>gi|422666039|ref|ZP_16725909.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330976469|gb|EGH76521.1| porphobilinogen deaminase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 313
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHSMKDVP L C +RE
Sbjct: 67 ETALLENNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFASLDQLPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+HE+T V+ ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGC 242
>gi|317494824|ref|ZP_07953235.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917149|gb|EFV38497.1| porphobilinogen deaminase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 323
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTILP--------------- 31
E AL++G DIAVHSMKDVP D + P
Sbjct: 77 ELALLDGRADIAVHSMKDVPVAFPEGLGLVTICEREDPRDAFVSPKYARLEDLPEGSIVG 136
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L + E +
Sbjct: 137 TSSLRRQCQLREIRPDLIVRDLRGNVGTRLAKLDNGDYDAIILAAAGLKRLELEERIRYA 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ND + L LN +T V ERA L+G C
Sbjct: 197 LPPEQSLPAVGQGAVGIECRLNDTRTQALLAPLNDIDTATRVSAERAMNTRLEGGC 252
>gi|281203457|gb|EFA77657.1| porphobilinogen deaminase [Polysphondylium pallidum PN500]
Length = 324
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 52/181 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ +++G IDIAVHS+KD+PT + L +RE
Sbjct: 71 EDLMLSGHIDIAVHSLKDLPTKFPEGLSLGAITKRENCFDAFIAHPKYGKDARLSSMPEG 130
Query: 38 ---------------------------GNVQARLRKL-NEGVIQATLSALAGLKCLNMTE 69
GN+ R KL G + A+AGL+ L T+
Sbjct: 131 AVIGSSSLRRVSQLKRAYPQLQFKDIRGNLNTRFNKLETSGEYDGMILAVAGLERLGWTD 190
Query: 70 NVTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGS 129
+T +L + L AV QGA+GI C S+D+ + L LNH ET Q ERA L L+G
Sbjct: 191 RITEVLQPEVSLYAVGQGALGIECRSDDEFVQSLLAPLNHYETAQCCAAERAMLRELEGG 250
Query: 130 C 130
C
Sbjct: 251 C 251
>gi|37528461|ref|NP_931806.1| porphobilinogen deaminase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|55976477|sp|Q7MYN1.1|HEM3_PHOLL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|36787899|emb|CAE17016.1| porphobilinogen deaminase (PBG) (hydroxymethylbilane synthase)
(HMBS) (pre-uroporphyrinogen synthase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 313
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 77/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPT--------------------------YLLDKTILP---- 31
E AL+ G DIAVHSMKDVP + LD+ LP
Sbjct: 67 ELALLEGRADIAVHSMKDVPISFPEGLGLVTICERDDPRDAFVSVKYHSLDE--LPTGSI 124
Query: 32 ---------CNLQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
C L+ GNV RL KL+ G A + A+AGLK L + E +
Sbjct: 125 VGTSSLRRQCQLRELRPDLIVRDLRGNVGTRLNKLDNGHYDAIILAVAGLKRLKLHERIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D++ L LNH +T V+ ERA L+G C
Sbjct: 185 TPLTAEQSLPAVGQGAVGIECRLDDQQTQTLLAPLNHYDTEVCVLAERAMNTRLEGGC 242
>gi|386321167|ref|YP_006017329.1| porphobilinogen deaminase [Riemerella anatipestifer RA-GD]
gi|416109431|ref|ZP_11591390.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM]
gi|442313933|ref|YP_007355236.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-CH-2]
gi|315023924|gb|EFT36926.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-YM]
gi|325335710|gb|ADZ11984.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-GD]
gi|441482856|gb|AGC39542.1| Porphobilinogen deaminase [Riemerella anatipestifer RA-CH-2]
Length = 306
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+N +IDIAVHS+KDVPT L L L+R+
Sbjct: 69 ALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDKSLEELTIATSS 128
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RL+KL +G+ ATL +LAGLK + + + LP
Sbjct: 129 LRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMALDIPYEH-LPF 187
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG + +A +++ ++ + + ++NH +T+ V ER FL L+G C
Sbjct: 188 --MISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEGGC 238
>gi|162139476|ref|YP_855002.2| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 315
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 73 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDELPQGAVVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 133 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 193 IEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRALQGGC 248
>gi|423211333|ref|ZP_17197886.1| porphobilinogen deaminase [Aeromonas veronii AER397]
gi|404613928|gb|EKB10941.1| porphobilinogen deaminase [Aeromonas veronii AER397]
Length = 330
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + K I LP
Sbjct: 88 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAELPQGAVVG 147
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 148 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 208 IEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHAETRARVLTERAMNRALQGGC 263
>gi|269213761|ref|ZP_05982800.2| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
gi|269145303|gb|EEZ71721.1| hydroxymethylbilane synthase [Neisseria cinerea ATCC 14685]
Length = 325
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 81 EQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPKGAVVG 140
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + E + I
Sbjct: 141 TSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELDERIRMI 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ + + + L LNH+ T V ERA L GSC
Sbjct: 201 LSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGGSC 256
>gi|423201497|ref|ZP_17188077.1| porphobilinogen deaminase [Aeromonas veronii AER39]
gi|404616854|gb|EKB13796.1| porphobilinogen deaminase [Aeromonas veronii AER39]
Length = 330
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + K I LP
Sbjct: 88 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAELPQGAVVG 147
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 148 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 208 IEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHAETRARVLTERAMNRALQGGC 263
>gi|242015312|ref|XP_002428308.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
gi|212512893|gb|EEB15570.1| Porphobilinogen deaminase, putative [Pediculus humanus corporis]
Length = 356
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 76/180 (42%), Gaps = 51/180 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL E+D VHS+KD+PT L + L+RE
Sbjct: 68 EAALEKNEVDFVVHSLKDLPTSLPPNLTIGAILKREDPRDALVVNKNLNFKNVSSLPESS 127
Query: 38 --------------------------GNVQARLRKLNEG-VIQATLSALAGLKCLNMTEN 70
GN+ RL+KL+EG + A AGLK L +
Sbjct: 128 VIGTSSLRRCAQLCRNYPNLKVENIRGNLNTRLKKLDEGDKYTGIVLAAAGLKRLKYDDR 187
Query: 71 VTNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+T IL ++ML AV QGA+ + C N++K+ L LN T V+ ER+FL TL G C
Sbjct: 188 ITQILEPNEMLYAVGQGALAVECNKNNEKVLDILEVLNDHSTILRVIAERSFLKTLGGGC 247
>gi|403745043|ref|ZP_10954071.1| porphobilinogen deaminase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121698|gb|EJY55975.1| porphobilinogen deaminase [Alicyclobacillus hesperidum URH17-3-68]
Length = 315
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
EEAL G+ D+AVHSMKDVP L + LP
Sbjct: 65 EEALRLGQADLAVHSMKDVPYELAAGLVIAGIPMREDARDVVVSRAGCSLAELPNGARVG 124
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RLR+ +G A + A AGL + + +
Sbjct: 125 TSSLRRMAQLRRARPDLRIEPLRGNIDTRLRRAEQGDFDAVVLAAAGLHRMGWQQRIHEY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D + AV QG + + C +D+ + L +H T AV ERAFL L GSC
Sbjct: 185 LPVDVCVPAVGQGVLAVECREDDETLVNMLNRWSHPLTVTAVAAERAFLRRLQGSC 240
>gi|145300736|ref|YP_001143577.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142853508|gb|ABO91829.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 315
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 73 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEALPQGAVVG 132
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 133 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 193 IEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRALQGGC 248
>gi|418290010|ref|ZP_12902212.1| porphobilinogen deaminase [Neisseria meningitidis NM220]
gi|421537498|ref|ZP_15983684.1| porphobilinogen deaminase [Neisseria meningitidis 93003]
gi|421554330|ref|ZP_16000274.1| porphobilinogen deaminase [Neisseria meningitidis 98008]
gi|433521349|ref|ZP_20478048.1| porphobilinogen deaminase [Neisseria meningitidis 61103]
gi|372202382|gb|EHP16205.1| porphobilinogen deaminase [Neisseria meningitidis NM220]
gi|402318976|gb|EJU54490.1| porphobilinogen deaminase [Neisseria meningitidis 93003]
gi|402333009|gb|EJU68325.1| porphobilinogen deaminase [Neisseria meningitidis 98008]
gi|432261626|gb|ELL16873.1| porphobilinogen deaminase [Neisseria meningitidis 61103]
Length = 311
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E+AL +G D+AVHS+KDVP L + L
Sbjct: 67 EQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERANPFDAFVSNQYARLEEMPKGAVVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RL KL+ G A + A AGL+ L + E + I
Sbjct: 127 TSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLDNGEYDAIILAAAGLQRLELDERIRMI 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A QGA+GI ++ + + + L LNH+ T V ERA L GSC
Sbjct: 187 LSESDSLPAAGQGALGIEIAAHREDLYEVLKPLNHDTTHACVTAERALARALGGSC 242
>gi|334702878|ref|ZP_08518744.1| porphobilinogen deaminase [Aeromonas caviae Ae398]
Length = 309
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP D TI LP
Sbjct: 67 ETAMLEGRADIAVHSMKDVPVEFPDGLGLHTICEREDPRDAFVSNHFNQIDELPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +
Sbjct: 127 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRIAAF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 187 IEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRALQGGC 242
>gi|313206850|ref|YP_004046027.1| porphobilinogen deaminase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|383486160|ref|YP_005395072.1| porphobilinogen deaminase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|312446166|gb|ADQ82521.1| porphobilinogen deaminase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|380460845|gb|AFD56529.1| porphobilinogen deaminase [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
Length = 303
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 49/173 (28%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
AL+N +IDIAVHS+KDVPT L L L+R+
Sbjct: 66 ALLNKQIDIAVHSLKDVPTQLPQNIALIAYLERDYPQDVLVRSSNAKDKSLEELTIATSS 125
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNVQ RL+KL +G+ ATL +LAGLK + + + LP
Sbjct: 126 LRRRAFWLKQFPNTKFSDIRGNVQTRLQKLEDGIADATLFSLAGLKRMALDIPYEH-LPF 184
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
M+ A +QG + +A +++ ++ + + ++NH +T+ V ER FL L+G C
Sbjct: 185 --MISAPSQGVVTVAGHTDNTEINEIVKTINHHQTQVCVEIERQFLNRLEGGC 235
>gi|315658068|ref|ZP_07910940.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
gi|315496397|gb|EFU84720.1| hydroxymethylbilane synthase [Staphylococcus lugdunensis M23590]
Length = 310
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ L N EID A+HS+KDVP+ L + L C RE
Sbjct: 65 QHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPDGSIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGLK + +++ VT
Sbjct: 125 TSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSDDIVTT 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D +L A+ QGA+GI C S+D ++ L +++++ V ER FL +DGSC
Sbjct: 185 YLDKDVLLPAIGQGALGIECRSDDVELLALLNQVHNQQVADCVTAERTFLAAMDGSC 241
>gi|440697488|ref|ZP_20879896.1| hydroxymethylbilane synthase [Streptomyces turgidiscabies Car8]
gi|440280188|gb|ELP67969.1| hydroxymethylbilane synthase [Streptomyces turgidiscabies Car8]
Length = 330
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 76/183 (41%), Gaps = 55/183 (30%)
Query: 3 EALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------- 37
EAL+ GE+D AVHS+KD+PT D +L +RE
Sbjct: 73 EALLRGEVDFAVHSLKDLPTAQPDDLVLAAIPEREDPRDVLVARGDLKFTDLPPGARVGT 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV R+ + G + A + A AGL + + V
Sbjct: 133 GSTRRTAQLNAYARAHGLSVEVVPVRGNVDTRIGFVRSGELDAVVLAAAGLGRIGRADEV 192
Query: 72 TNILPIDDMLLAVAQGAIGIAC----TSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLD 127
T+ L +D +L A QGA+ I C TS+D + LG L+ +TR AV ER+ L L+
Sbjct: 193 TDFLSVDMVLPAPGQGALAIECRAGNTSHDSDLIAALGELDDPDTRAAVTAERSLLAALE 252
Query: 128 GSC 130
C
Sbjct: 253 AGC 255
>gi|333895087|ref|YP_004468962.1| porphobilinogen deaminase [Alteromonas sp. SN2]
gi|332995105|gb|AEF05160.1| porphobilinogen deaminase [Alteromonas sp. SN2]
Length = 311
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTI---------LP------ 31
E A++ G DIAVHSMKD+P D + LP
Sbjct: 70 EVAMLEGRADIAVHSMKDLPVEFPEGFGLHAICERENPFDAFVSNHFDNLDALPEGAVVG 129
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C +++ GNV RL KL+ G A + A AGL L M E +
Sbjct: 130 TSSLRRQCQIRKHRPDLKIKDLRGNVNTRLAKLDAGEYDAIILASAGLIRLGMEERIKTG 189
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP L AV QGA+GI C ++D ++ L +LNH ET+ V ERA L+G C
Sbjct: 190 LPASVSLPAVGQGAVGIECRNDDAELIALLQALNHGETQTRVSAERAMNERLEGGC 245
>gi|330827978|ref|YP_004390930.1| Porphobilinogen deaminase [Aeromonas veronii B565]
gi|328803114|gb|AEB48313.1| Porphobilinogen deaminase [Aeromonas veronii B565]
Length = 330
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----------------------KTI--LP------ 31
E A++ G DIAVHSMKDVP + K I LP
Sbjct: 88 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFKAIAELPQGAVVG 147
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 148 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 208 IEPEQSLPANGQGAVGIECRLDDVELHALLAPLEHTETRARVLTERAMNRALQGGC 263
>gi|432367281|ref|ZP_19610393.1| porphobilinogen deaminase [Escherichia coli KTE10]
gi|430890821|gb|ELC13381.1| porphobilinogen deaminase [Escherichia coli KTE10]
Length = 320
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICERADPRDAFVSNNYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|293407432|ref|ZP_06651352.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
gi|291425543|gb|EFE98581.1| porphobilinogen deaminase [Escherichia coli FVEC1412]
Length = 313
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 77/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + ++
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESHIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 185 AALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGC 242
>gi|161505549|ref|YP_001572661.1| porphobilinogen deaminase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:- str. RSK2980]
gi|189028154|sp|A9MJ10.1|HEM3_SALAR RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|160866896|gb|ABX23519.1| hypothetical protein SARI_03714 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 313
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LPC----- 32
E AL+ DIAVHSMKDVP D TI LP
Sbjct: 67 EIALLEKRADIAVHSMKDVPVAFPDGLGLVTICEREDPRDAFVSNQYHSLDDLPAGSIVG 126
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGDYDAIILAVAGLKRLGLASRIRTA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGAIGI C +D + L LNH +T V ERA L+G C
Sbjct: 187 LPPEVSLPAVGQGAIGIECRLDDARTHALLAPLNHPQTALRVTAERAMNTRLEGGC 242
>gi|117559297|gb|ABK36245.1| porphobilinogen deaminase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 330
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 88 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFGQIDELPQGAVVG 147
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 148 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 207
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 208 IEPEQSLPANGQGAVGIECRLDDHELHALLAPLEHPETRIRVLTERAMNRALQGGC 263
>gi|28867368|ref|NP_789987.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|38257983|sp|Q88B91.1|HEM3_PSESM RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|28850602|gb|AAO53682.1| porphobilinogen deaminase [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 313
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHSMKDVP L C +RE
Sbjct: 67 ETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLQIRFLRGNVNTRLAKLDAGEYNAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+HE+T V+ ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGC 242
>gi|452748526|ref|ZP_21948305.1| porphobilinogen deaminase [Pseudomonas stutzeri NF13]
gi|452007700|gb|EMD99953.1| porphobilinogen deaminase [Pseudomonas stutzeri NF13]
Length = 312
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L C +RE
Sbjct: 66 ETALMENEADIAVHSMKDVPMEFPEGLGLYCICEREDPRDAFVSNRFDDLDALPPGSVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L E + +
Sbjct: 126 TSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKLDAGEYDAIILAAAGLIRLGFGERIRSS 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +D+ L A QGA+GI C + D ++ L LNH T VV ERA L+G C
Sbjct: 186 IGVDESLPAGGQGAVGIECRTTDSELHALLECLNHAPTATRVVAERALNKRLNGGC 241
>gi|308188851|ref|YP_003932982.1| porphobilinogen deaminase [Pantoea vagans C9-1]
gi|308059361|gb|ADO11533.1| Porphobilinogen deaminase [Pantoea vagans C9-1]
Length = 317
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A+ +G D+AVHSMKDVP + TI LP
Sbjct: 71 ELAMQDGRADMAVHSMKDVPVSFPEGLGLVTICERDDPRDAFVSHHYDSIDALPQGAVVG 130
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L M + +
Sbjct: 131 TSSLRRQCQISARRPDLVIRSLRGNVGTRLGKLDAGEYDAIILAVAGLKRLGMQDRIRQA 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L AV QGA+GI C ND + L +LNH++T V ERA L+G C
Sbjct: 191 MPAEVSLPAVGQGAVGIECRLNDSVLIDLLRALNHDDTEVCVRAERAMNTRLEGGC 246
>gi|260893122|ref|YP_003239219.1| porphobilinogen deaminase [Ammonifex degensii KC4]
gi|260865263|gb|ACX52369.1| porphobilinogen deaminase [Ammonifex degensii KC4]
Length = 308
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 50/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TILP-------------------------- 31
E AL+ +ID+AVHS+KD+PT L ++ +LP
Sbjct: 69 EVALLEEKIDLAVHSLKDLPTELPEELCVGAVLPREHPGDVLISLTGAGLEDLPEGARIG 128
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCL--NMTENVT 72
+L+R+ GNV RLRKL +G +A + A AGL+ L ++T +T
Sbjct: 129 TSSLRRQAQLKAARPDLNFVPLRGNVPTRLRKLEKGECEAVVLAWAGLRRLRLDLTGRMT 188
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+LP L AVAQGAIG+ D+++ K + L+ TR V ERAFL L G C
Sbjct: 189 -LLPYQVCLPAVAQGAIGVEMRKEDRELRKMVEVLDDPTTRLEVTAERAFLRWLGGGC 245
>gi|429091841|ref|ZP_19154494.1| Porphobilinogen deaminase [Cronobacter dublinensis 1210]
gi|426743502|emb|CCJ80607.1| Porphobilinogen deaminase [Cronobacter dublinensis 1210]
Length = 313
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A+++G DIAVHSMKDVP + L +RE
Sbjct: 67 ELAMLDGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNQYKSLDDMPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A+AGLK L + +T+
Sbjct: 127 TSSLRRQCQIAARRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLQLDARITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C +D + L LNH+ET V ERA L+G C
Sbjct: 187 LAPEVSLPAVGQGAVGIECRLDDTRTRDLLAPLNHDETAVRVRAERAMNTRLEGGC 242
>gi|296136292|ref|YP_003643534.1| porphobilinogen deaminase [Thiomonas intermedia K12]
gi|410694103|ref|YP_003624725.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp.
3As]
gi|294340528|emb|CAZ88912.1| Porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase)
(HMBS) (Pre-uroporphyrinogen synthase) [Thiomonas sp.
3As]
gi|295796414|gb|ADG31204.1| porphobilinogen deaminase [Thiomonas intermedia K12]
Length = 317
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL---------------LDKTILP--------------- 31
E A+ G D+AVHS+KDVP L D + P
Sbjct: 72 EVAMEQGHADLAVHSLKDVPMVLPTGFALTAVMEREDPRDAWVSPHYANLADLPAGAVVG 131
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GN+ RLRKL+EG L A AGLK L + E V +
Sbjct: 132 TSSLRRESQLRARYPHLKVQALRGNLDTRLRKLDEGQYAGILLAAAGLKRLGLGERVRAV 191
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DML AV Q A+GI ++ +A+ L +LNH T ERA L GSC
Sbjct: 192 IEPEDMLPAVGQAALGIEIRADRPDLAQALAALNHPPTALCTHAERAVSRGLGGSC 247
>gi|333907102|ref|YP_004480688.1| porphobilinogen deaminase [Marinomonas posidonica IVIA-Po-181]
gi|333477108|gb|AEF53769.1| Porphobilinogen deaminase [Marinomonas posidonica IVIA-Po-181]
Length = 307
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL++ DIAVHSMKDVP + L +RE
Sbjct: 66 EAALLDRRADIAVHSMKDVPMAFPEGLGLAVICEREDPSDAFVSNQYSSLDDLPAGAVVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRK++EG A + A AGL L M + +
Sbjct: 126 TSSLRRSCQLKMHRPDLIIKDLRGNVNTRLRKMDEGEYDAIILATAGLLRLEMRDRIRQK 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P + L A QGA+GI C ++D+ + L L HEET V ERA L+G C
Sbjct: 186 IPAEMSLPAGGQGAMGIECRADDRPTLELLVPLQHEETTYRVTAERALNERLNGGC 241
>gi|157163278|ref|YP_001460596.1| porphobilinogen deaminase [Escherichia coli HS]
gi|170022172|ref|YP_001727126.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188494806|ref|ZP_03002076.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|300950432|ref|ZP_07164354.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|300955191|ref|ZP_07167588.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|301646129|ref|ZP_07246029.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|331644538|ref|ZP_08345658.1| hydroxymethylbilane synthase [Escherichia coli H736]
gi|386282532|ref|ZP_10060180.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B]
gi|386597663|ref|YP_006094063.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|386707070|ref|YP_006170917.1| porphobilinogen deaminase [Escherichia coli P12b]
gi|387623457|ref|YP_006131085.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|404377199|ref|ZP_10982337.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|417265035|ref|ZP_12052414.1| hydroxymethylbilane synthase [Escherichia coli 2.3916]
gi|417279267|ref|ZP_12066577.1| hydroxymethylbilane synthase [Escherichia coli 3.2303]
gi|419938617|ref|ZP_14455443.1| porphobilinogen deaminase [Escherichia coli 75]
gi|422818959|ref|ZP_16867171.1| porphobilinogen deaminase [Escherichia coli M919]
gi|423703327|ref|ZP_17677759.1| porphobilinogen deaminase [Escherichia coli H730]
gi|432419329|ref|ZP_19661918.1| porphobilinogen deaminase [Escherichia coli KTE44]
gi|432487562|ref|ZP_19729468.1| porphobilinogen deaminase [Escherichia coli KTE212]
gi|432578075|ref|ZP_19814520.1| porphobilinogen deaminase [Escherichia coli KTE56]
gi|432629428|ref|ZP_19865392.1| porphobilinogen deaminase [Escherichia coli KTE77]
gi|432634711|ref|ZP_19870608.1| porphobilinogen deaminase [Escherichia coli KTE81]
gi|432663054|ref|ZP_19898681.1| porphobilinogen deaminase [Escherichia coli KTE111]
gi|432672899|ref|ZP_19908416.1| porphobilinogen deaminase [Escherichia coli KTE119]
gi|432687636|ref|ZP_19922923.1| porphobilinogen deaminase [Escherichia coli KTE156]
gi|432689133|ref|ZP_19924398.1| porphobilinogen deaminase [Escherichia coli KTE161]
gi|432739303|ref|ZP_19974030.1| porphobilinogen deaminase [Escherichia coli KTE42]
gi|432878171|ref|ZP_20095620.1| porphobilinogen deaminase [Escherichia coli KTE154]
gi|432951064|ref|ZP_20144807.1| porphobilinogen deaminase [Escherichia coli KTE197]
gi|433050275|ref|ZP_20237594.1| porphobilinogen deaminase [Escherichia coli KTE120]
gi|433175698|ref|ZP_20360200.1| porphobilinogen deaminase [Escherichia coli KTE232]
gi|157068958|gb|ABV08213.1| porphobilinogen deaminase [Escherichia coli HS]
gi|169757100|gb|ACA79799.1| porphobilinogen deaminase [Escherichia coli ATCC 8739]
gi|188490005|gb|EDU65108.1| porphobilinogen deaminase [Escherichia coli 53638]
gi|226838708|gb|EEH70736.1| porphobilinogen deaminase [Escherichia sp. 1_1_43]
gi|260451352|gb|ACX41774.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|300317908|gb|EFJ67692.1| porphobilinogen deaminase [Escherichia coli MS 175-1]
gi|300450239|gb|EFK13859.1| porphobilinogen deaminase [Escherichia coli MS 116-1]
gi|301075655|gb|EFK90461.1| porphobilinogen deaminase [Escherichia coli MS 146-1]
gi|315138381|dbj|BAJ45540.1| porphobilinogen deaminase [Escherichia coli DH1]
gi|331036210|gb|EGI08445.1| hydroxymethylbilane synthase [Escherichia coli H736]
gi|383105238|gb|AFG42747.1| Porphobilinogen deaminase [Escherichia coli P12b]
gi|385537517|gb|EIF84388.1| porphobilinogen deaminase [Escherichia coli M919]
gi|385708466|gb|EIG45478.1| porphobilinogen deaminase [Escherichia coli H730]
gi|386120382|gb|EIG69011.1| porphobilinogen deaminase [Escherichia sp. 4_1_40B]
gi|386221217|gb|EII43661.1| hydroxymethylbilane synthase [Escherichia coli 2.3916]
gi|386238044|gb|EII74984.1| hydroxymethylbilane synthase [Escherichia coli 3.2303]
gi|388409965|gb|EIL70226.1| porphobilinogen deaminase [Escherichia coli 75]
gi|430935889|gb|ELC56184.1| porphobilinogen deaminase [Escherichia coli KTE44]
gi|431013394|gb|ELD27127.1| porphobilinogen deaminase [Escherichia coli KTE212]
gi|431111498|gb|ELE15397.1| porphobilinogen deaminase [Escherichia coli KTE56]
gi|431160118|gb|ELE60636.1| porphobilinogen deaminase [Escherichia coli KTE77]
gi|431175851|gb|ELE75838.1| porphobilinogen deaminase [Escherichia coli KTE81]
gi|431196494|gb|ELE95420.1| porphobilinogen deaminase [Escherichia coli KTE111]
gi|431207188|gb|ELF05458.1| porphobilinogen deaminase [Escherichia coli KTE119]
gi|431218883|gb|ELF16308.1| porphobilinogen deaminase [Escherichia coli KTE156]
gi|431234380|gb|ELF29781.1| porphobilinogen deaminase [Escherichia coli KTE161]
gi|431278976|gb|ELF69947.1| porphobilinogen deaminase [Escherichia coli KTE42]
gi|431417411|gb|ELG99874.1| porphobilinogen deaminase [Escherichia coli KTE154]
gi|431477530|gb|ELH57298.1| porphobilinogen deaminase [Escherichia coli KTE197]
gi|431561783|gb|ELI35145.1| porphobilinogen deaminase [Escherichia coli KTE120]
gi|431687651|gb|ELJ53195.1| porphobilinogen deaminase [Escherichia coli KTE232]
Length = 320
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|418361288|ref|ZP_12961943.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|356687318|gb|EHI51900.1| porphobilinogen deaminase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 309
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 67 ETAMLEGRADIAVHSMKDVPVEFPEGLGLHTICEREDPRDAFVSNRFSQIEALPQGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGLK L M +T
Sbjct: 127 TSSLRRQCQLRAARPDLVIRDLRGNVNTRLAKLDAGEYDAIILAAAGLKRLEMAHRITAF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L A QGA+GI C +D ++ L L H ETR V+ ERA L G C
Sbjct: 187 IEPEQSLPANGQGAVGIECRLDDHELHTLLAPLEHAETRIRVLTERAMNRALQGGC 242
>gi|148654060|ref|YP_001281153.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
gi|148573144|gb|ABQ95203.1| porphobilinogen deaminase [Psychrobacter sp. PRwf-1]
Length = 339
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G DIAVHS+KDVP L + IL +RE
Sbjct: 74 EQALYDGRADIAVHSLKDVPMVLPEGLILGTYCKRETPTDAFVSNTYDSLDALPQGAVVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A +GLK + +++ +
Sbjct: 134 TASLRRQCQIKAHRPDLIIKSLRGNVQTRLSKLDAGEYDAIILATSGLKRVELSDRIKQE 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ ID L AV QGA+ I C S+D + L LN + R ++ ERA L+G C
Sbjct: 194 IDIDISLPAVGQGALAIECRSDDDAVLSLLKPLNDGQARIRLMAERALNRRLEGGC 249
>gi|432706538|ref|ZP_19941631.1| porphobilinogen deaminase [Escherichia coli KTE171]
gi|431239860|gb|ELF34326.1| porphobilinogen deaminase [Escherichia coli KTE171]
Length = 320
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|401765715|ref|YP_006580722.1| porphobilinogen deaminase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400177249|gb|AFP72098.1| porphobilinogen deaminase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 313
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E AL+ DIAVHSMKDVP + TI LP
Sbjct: 67 ELALLENRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNRYDSLDALPEGSVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A+AGLK L + E ++
Sbjct: 127 TSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLDNGEYDAIILAVAGLKRLGLEERISVA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L LNH+ET V ERA L+G C
Sbjct: 187 LPPELSLPAVGQGAVGIECRLDDVRTRQLLAPLNHDETAIRVKAERAMNTRLEGGC 242
>gi|398385822|ref|ZP_10543839.1| porphobilinogen deaminase [Sphingobium sp. AP49]
gi|397719854|gb|EJK80418.1| porphobilinogen deaminase [Sphingobium sp. AP49]
Length = 308
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 77/174 (44%), Gaps = 46/174 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----------------------TILPCN------ 33
+ AL+ GEID AVHSMKDV T D LP N
Sbjct: 71 DRALVEGEIDCAVHSMKDVETIRPDAIHVAAMLPRADVRDRLVGVENFAALPANPIIGTS 130
Query: 34 -------LQR----------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILP 76
++R GNV RL KL G ATL A AGL L ++ +
Sbjct: 131 SPRRAAQVKRLRPDAQIILFRGNVATRLAKLETGEAHATLLAAAGLDRLGQA-DIGATIE 189
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ID ML A +QGA+GI +++ M +L ++NH +T V+ ERA L L G+C
Sbjct: 190 IDTMLPAPSQGAVGIETLADNDAMLGWLAAINHRDTFDCVMAERAVLRGLGGTC 243
>gi|89074445|ref|ZP_01160922.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
gi|89049733|gb|EAR55283.1| porphobilinogen deaminase [Photobacterium sp. SKA34]
Length = 310
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 80/176 (45%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G DIAVHSMKDVP + TI LP
Sbjct: 67 EVAMLEGRADIAVHSMKDVPVEFPEGLGLVTICEREDPRDAFVSNKYNNIDELPQGAIVG 126
Query: 32 -------CNLQRE----------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C L+ + GNV RLRK++EG A + A AGLK L M + + +
Sbjct: 127 TSSLRRQCQLRAQRPDLIVNDLRGNVNTRLRKMDEGQYDAIILACAGLKRLKMEDRIRSE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D ++ + L +L+ + T V+CERA L G C
Sbjct: 187 IAPEVSLPAVGQGAVGIECRLDDTRVRQLLTALSDQATTTRVLCERAMNNHLQGGC 242
>gi|375104727|ref|ZP_09750988.1| porphobilinogen deaminase [Burkholderiales bacterium JOSHI_001]
gi|374665458|gb|EHR70243.1| porphobilinogen deaminase [Burkholderiales bacterium JOSHI_001]
Length = 321
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 71/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL G D+AVHS+KDVP L L ++RE
Sbjct: 77 ETALEEGRADLAVHSLKDVPMDLPPGFALAAVMEREDPRDAFVSNRYEQLAALPQGAVVG 136
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL+EG A + A AGLK L + +
Sbjct: 137 TSSLRRVVQLLAVRPDLRIEPLRGNLDTRLRKLDEGGYDAIVLAAAGLKRLGLGARIRAT 196
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+D M+ A QGA+GI +ND ++A+ L L H T ERA L GSC
Sbjct: 197 FEVDQMIPAAGQGALGIEIRANDPELAQTLAPLVHTPTWLTAHAERAVSRALGGSC 252
>gi|359460636|ref|ZP_09249199.1| porphobilinogen deaminase [Acaryochloris sp. CCMEE 5410]
Length = 321
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPT-----------------------------YLLDK----- 27
E +++ E D+AVHS+KD+PT Y LD
Sbjct: 70 EVSMLRKETDLAVHSLKDLPTNLPEGLCLGVVTERVDPADALVVHENFKAYQLDTLPEGA 129
Query: 28 TILPCNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
I +L+R GN+ RL+KL+EG + A+AGL+ L + +
Sbjct: 130 VIGTSSLRRLAQLRYNYPHLEFKDIRGNLNTRLQKLDEGEYDGIILAVAGLQRLGFGDRI 189
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P D L AV QGA+GI C D+++ ++ +L H + ER+FL L+G C
Sbjct: 190 HQVIPADISLHAVGQGALGIECREGDEEIMAFIKALEHAPSAHRCTAERSFLHELEGGC 248
>gi|429769899|ref|ZP_19301988.1| hydroxymethylbilane synthase [Brevundimonas diminuta 470-4]
gi|429186106|gb|EKY27068.1| hydroxymethylbilane synthase [Brevundimonas diminuta 470-4]
Length = 297
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 48/176 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPT--------------------YLLDKTI----LP------ 31
EEAL++G +D+AVHSMKDVP ++ D LP
Sbjct: 52 EEALLDGRVDVAVHSMKDVPAEQPPGLAIAAVPEREDPRHAFISDHYATFADLPQGARFG 111
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL++L +G A L A +GL L + E +
Sbjct: 112 TASLRRQAQALALRPDLNIEMLRGNVDTRLKRLRDGDFDAILLACSGLNRLGLGEVIRQR 171
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP+D L A QGA+ + D A + +LNH T AV ER + L+GSC
Sbjct: 172 LPLDAFLPAPGQGALALQTREGDVD-AAWTRALNHAPTALAVAAERGAMAALEGSC 226
>gi|296331638|ref|ZP_06874107.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675403|ref|YP_003867075.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151233|gb|EFG92113.1| porphobilinogen deaminase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413647|gb|ADM38766.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 313
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+N +ID+AVHSMKD+P L + ++ C +RE
Sbjct: 65 EQALLNEDIDMAVHSMKDMPAVLPEGLVIGCIPEREDPRDALISKNHVKLSEMKEGAVIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V T
Sbjct: 125 TSSLRRSAQLLIERPDITIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKQDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+ I C +D+++ E T++ V+ ERA+L ++G C
Sbjct: 185 FLEPDRCLPAVGQGALAIECRESDEELLALFSQFTDEYTKRTVLAERAYLNAMEGGC 241
>gi|253775572|ref|YP_003038403.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300930031|ref|ZP_07145463.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
gi|253326616|gb|ACT31218.1| porphobilinogen deaminase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300462064|gb|EFK25557.1| porphobilinogen deaminase [Escherichia coli MS 187-1]
Length = 320
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|251787062|ref|YP_003001366.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)]
gi|254163746|ref|YP_003046854.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|254290496|ref|YP_003056244.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)]
gi|422789246|ref|ZP_16841977.1| porphobilinogen deaminase [Escherichia coli H489]
gi|422794124|ref|ZP_16846815.1| porphobilinogen deaminase [Escherichia coli TA007]
gi|242379335|emb|CAQ34146.1| hydroxymethylbilane synthase [Escherichia coli BL21(DE3)]
gi|253975647|gb|ACT41318.1| porphobilinogen deaminase [Escherichia coli B str. REL606]
gi|253979803|gb|ACT45473.1| porphobilinogen deaminase [Escherichia coli BL21(DE3)]
gi|323959059|gb|EGB54728.1| porphobilinogen deaminase [Escherichia coli H489]
gi|323969355|gb|EGB64654.1| porphobilinogen deaminase [Escherichia coli TA007]
Length = 313
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 185 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 242
>gi|417273268|ref|ZP_12060615.1| hydroxymethylbilane synthase [Escherichia coli 2.4168]
gi|417293578|ref|ZP_12080857.1| hydroxymethylbilane synthase [Escherichia coli B41]
gi|421777512|ref|ZP_16214107.1| porphobilinogen deaminase [Escherichia coli AD30]
gi|442591331|ref|ZP_21009816.1| Porphobilinogen deaminase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|386234445|gb|EII66423.1| hydroxymethylbilane synthase [Escherichia coli 2.4168]
gi|386251766|gb|EIJ01458.1| hydroxymethylbilane synthase [Escherichia coli B41]
gi|408457426|gb|EKJ81222.1| porphobilinogen deaminase [Escherichia coli AD30]
gi|441608569|emb|CCP95653.1| Porphobilinogen deaminase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
Length = 318
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 72 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 129
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 130 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 189
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 190 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 247
>gi|317058915|ref|ZP_07923400.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
gi|313684591|gb|EFS21426.1| porphobilinogen deaminase [Fusobacterium sp. 3_1_5R]
Length = 299
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTY-------------------LLDKTILP----------- 31
E++L+ GEIDIAVHSMKDVP+ L+ ++ P
Sbjct: 69 EKSLLEGEIDIAVHSMKDVPSVSPAGLICGAIPIREDVRDVLISRSGKPLAELPQGAIIG 128
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GN+ RLRKL E A + A AGLK + + E +T
Sbjct: 129 TSSLRRIQNIKKIRPDLEIKALRGNIHTRLRKLEEEQYDAIILAAAGLKRVKLEEKITEY 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A AQGA+ I C D ++ K L S++++ + +V ER F DG C
Sbjct: 189 LDPTVFPPAPAQGALYIQCREEDIEVQKILQSIHNKNLEKVLVVEREFSKIFDGGC 244
>gi|170680193|ref|YP_001746121.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
gi|170517911|gb|ACB16089.1| porphobilinogen deaminase [Escherichia coli SMS-3-5]
Length = 318
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 72 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYESLDA--LPAGSI 129
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 130 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 189
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 190 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 247
>gi|49176416|ref|YP_026260.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|170083288|ref|YP_001732608.1| porphobilinogen deaminase [Escherichia coli str. K-12 substr.
DH10B]
gi|238902882|ref|YP_002928678.1| porphobilinogen deaminase [Escherichia coli BW2952]
gi|312971913|ref|ZP_07786087.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|386616614|ref|YP_006136280.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88]
gi|387614504|ref|YP_006117620.1| porphobilinogen deaminase [Escherichia coli ETEC H10407]
gi|388479445|ref|YP_491637.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
W3110]
gi|415773838|ref|ZP_11486385.1| porphobilinogen deaminase [Escherichia coli 3431]
gi|417615465|ref|ZP_12265913.1| porphobilinogen deaminase [Escherichia coli STEC_EH250]
gi|417620475|ref|ZP_12270876.1| porphobilinogen deaminase [Escherichia coli G58-1]
gi|417636756|ref|ZP_12286961.1| porphobilinogen deaminase [Escherichia coli STEC_S1191]
gi|417945688|ref|ZP_12588918.1| porphobilinogen deaminase [Escherichia coli XH140A]
gi|417977671|ref|ZP_12618452.1| porphobilinogen deaminase [Escherichia coli XH001]
gi|418305436|ref|ZP_12917230.1| porphobilinogen deaminase [Escherichia coli UMNF18]
gi|419144912|ref|ZP_13689638.1| porphobilinogen deaminase [Escherichia coli DEC6A]
gi|419150800|ref|ZP_13695445.1| porphobilinogen deaminase [Escherichia coli DEC6B]
gi|419156320|ref|ZP_13700873.1| porphobilinogen deaminase [Escherichia coli DEC6C]
gi|419161676|ref|ZP_13706165.1| porphobilinogen deaminase [Escherichia coli DEC6D]
gi|419166769|ref|ZP_13711216.1| porphobilinogen deaminase [Escherichia coli DEC6E]
gi|419177488|ref|ZP_13721294.1| porphobilinogen deaminase [Escherichia coli DEC7B]
gi|419812381|ref|ZP_14337248.1| porphobilinogen deaminase [Escherichia coli O32:H37 str. P4]
gi|422769208|ref|ZP_16822929.1| porphobilinogen deaminase [Escherichia coli E1520]
gi|422773886|ref|ZP_16827567.1| porphobilinogen deaminase [Escherichia coli E482]
gi|425117424|ref|ZP_18519197.1| porphobilinogen deaminase [Escherichia coli 8.0566]
gi|425122144|ref|ZP_18523816.1| porphobilinogen deaminase [Escherichia coli 8.0569]
gi|425275096|ref|ZP_18666475.1| porphobilinogen deaminase [Escherichia coli TW15901]
gi|425285673|ref|ZP_18676685.1| porphobilinogen deaminase [Escherichia coli TW00353]
gi|450252905|ref|ZP_21902279.1| porphobilinogen deaminase [Escherichia coli S17]
gi|2506504|sp|P06983.2|HEM3_ECOLI RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|229836108|sp|B1XAH2.1|HEM3_ECODH RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|259647795|sp|C4ZZ69.1|HEM3_ECOBW RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|4388845|pdb|2YPN|A Chain A, Hydroxymethylbilane Synthase
gi|28373294|pdb|1GTK|A Chain A, Time-Resolved And Static-Ensemble Structural Chemistry Of
Hydroxymethylbilane Synthase
gi|41666|emb|CAA31132.1| unnamed protein product [Escherichia coli]
gi|48994974|gb|AAT48218.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676246|dbj|BAE77496.1| hydroxymethylbilane synthase [Escherichia coli str. K12 substr.
W3110]
gi|169891123|gb|ACB04830.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
DH10B]
gi|238861470|gb|ACR63468.1| hydroxymethylbilane synthase [Escherichia coli BW2952]
gi|309704240|emb|CBJ03588.1| porphobilinogen deaminase [Escherichia coli ETEC H10407]
gi|310334290|gb|EFQ00495.1| porphobilinogen deaminase [Escherichia coli 1827-70]
gi|315618498|gb|EFU99084.1| porphobilinogen deaminase [Escherichia coli 3431]
gi|323934193|gb|EGB30624.1| porphobilinogen deaminase [Escherichia coli E1520]
gi|323938941|gb|EGB35160.1| porphobilinogen deaminase [Escherichia coli E482]
gi|332345783|gb|AEE59117.1| porphobilinogen deaminase HemC [Escherichia coli UMNK88]
gi|339417534|gb|AEJ59206.1| porphobilinogen deaminase [Escherichia coli UMNF18]
gi|342362588|gb|EGU26705.1| porphobilinogen deaminase [Escherichia coli XH140A]
gi|344192664|gb|EGV46753.1| porphobilinogen deaminase [Escherichia coli XH001]
gi|345357641|gb|EGW89833.1| porphobilinogen deaminase [Escherichia coli STEC_EH250]
gi|345369692|gb|EGX01674.1| porphobilinogen deaminase [Escherichia coli G58-1]
gi|345384824|gb|EGX14682.1| porphobilinogen deaminase [Escherichia coli STEC_S1191]
gi|359333937|dbj|BAL40384.1| hydroxymethylbilane synthase [Escherichia coli str. K-12 substr.
MDS42]
gi|377988726|gb|EHV51901.1| porphobilinogen deaminase [Escherichia coli DEC6B]
gi|377989097|gb|EHV52266.1| porphobilinogen deaminase [Escherichia coli DEC6A]
gi|377992624|gb|EHV55770.1| porphobilinogen deaminase [Escherichia coli DEC6C]
gi|378003602|gb|EHV66643.1| porphobilinogen deaminase [Escherichia coli DEC6D]
gi|378006250|gb|EHV69236.1| porphobilinogen deaminase [Escherichia coli DEC6E]
gi|378028396|gb|EHV91014.1| porphobilinogen deaminase [Escherichia coli DEC7B]
gi|385154751|gb|EIF16760.1| porphobilinogen deaminase [Escherichia coli O32:H37 str. P4]
gi|408189612|gb|EKI15323.1| porphobilinogen deaminase [Escherichia coli TW15901]
gi|408197800|gb|EKI23051.1| porphobilinogen deaminase [Escherichia coli TW00353]
gi|408563212|gb|EKK39352.1| porphobilinogen deaminase [Escherichia coli 8.0566]
gi|408564355|gb|EKK40465.1| porphobilinogen deaminase [Escherichia coli 8.0569]
gi|449314184|gb|EMD04358.1| porphobilinogen deaminase [Escherichia coli S17]
Length = 313
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 185 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 242
>gi|90023307|ref|YP_529134.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
gi|89952907|gb|ABD82922.1| hydroxymethylbilane synthase [Saccharophagus degradans 2-40]
Length = 308
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ E DIAVHSMKDVP + L L+RE
Sbjct: 65 EHALLADEADIAVHSMKDVPMEFPEGLELAVILEREDPRDAWVSAGYENLDALPAGGVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGLK L + + +
Sbjct: 125 TSSLRRQSQILARRPDITVKFLRGNVNTRLAKLDAGEYDAIILAAAGLKRLKFGDRIRSY 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L A QGA+GI C S D + K L +L+H T + V+ ERA L+G C
Sbjct: 185 LSPEESLPAGGQGAVGIECRSADSETLKLLQALHHTITAEQVLAERAMNRRLEGGC 240
>gi|385329981|ref|YP_005883932.1| porphobilinogen deaminase [Marinobacter adhaerens HP15]
gi|311693131|gb|ADP96004.1| porphobilinogen deaminase [Marinobacter adhaerens HP15]
Length = 313
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL------------DKT------------ILP------ 31
EEA+++G D+AVHSMKDVP D T LP
Sbjct: 67 EEAMLDGRADLAVHSMKDVPMEFPEGLGLVAICEREDPTDAFVSNHYDNVDALPHGAVVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV RL KL+ G +A + A +GLK L E +
Sbjct: 127 TASLRREAQLRAYRPDLEIRVLRGNVNTRLAKLDAGEYEAIVLASSGLKRLGFHERIRYC 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP L AV QGA+GI C +D+ + L L H++T V ERA L+G C
Sbjct: 187 LPDTLSLPAVGQGALGIECRVDDQDLLAMLEPLKHKDTWDRVTAERALNRRLEGGC 242
>gi|157834325|pdb|1YPN|A Chain A, Reduced Form Hydroxymethylbilane Synthase (K59q Mutant)
Crystal Structure After 2 Hours In A Flow Cell
Determined By Time-Resolved Laue Diffraction
Length = 313
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 67 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 124
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 125 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 184
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 185 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 242
>gi|418960313|ref|ZP_13512204.1| porphobilinogen deaminase [Escherichia coli J53]
gi|384376920|gb|EIE34820.1| porphobilinogen deaminase [Escherichia coli J53]
Length = 286
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 40 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDA--LPAGSI 97
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 98 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 157
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 158 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 215
>gi|452077723|gb|AGF93671.1| porphobilinogen deaminase [uncultured organism]
Length = 315
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL------------------------LDKTILPCN---- 33
+EA+++ D+AVHS+KDVP + D LP N
Sbjct: 69 DEAILDKSADLAVHSLKDVPGEIPGGLQFGAFPERGDFADCFLSENYRDLFELPGNAVVG 128
Query: 34 ---LQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
++R+ GN+ R+RKL EG+ A + A AGLK L +
Sbjct: 129 TSSVRRQSQLKALRPDVEIHALRGNLDTRIRKLREGIFDAIIVAAAGLKRLGLGAKYEYR 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L V QGA+GI ++ ++ + L L+H+ TR AV ER+FL L GSC
Sbjct: 189 LVPPEFLPGVGQGALGIEVREDNAQIRELLSRLDHQPTRYAVDTERSFLQRLQGSC 244
>gi|52081298|ref|YP_080089.1| porphobilinogen deaminase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319647211|ref|ZP_08001433.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
gi|404490177|ref|YP_006714283.1| porphobilinogen deaminase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|81609014|sp|Q65GK1.1|HEM3_BACLD RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|52004509|gb|AAU24451.1| porphobilinogen deaminase (hydroxymethylbilane synthase) [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52349179|gb|AAU41813.1| hydroxymethylbilane synthase HemC [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317390558|gb|EFV71363.1| porphobilinogen deaminase [Bacillus sp. BT1B_CT2]
Length = 313
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+A+++GEID+AVHSMKD+P+ L + ++ C +RE
Sbjct: 65 EQAMLSGEIDMAVHSMKDMPSVLPEGLMVGCIPKREDARDVLISKGRQKLADLKQGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GN+ RL+KL A + A AGL + ++V T
Sbjct: 125 TSSLRRSAQLLQMRPDLEIKWIRGNIDTRLKKLETEDYDAIILAAAGLSRMGWKDDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+ I C +D+++ LN T+ V ERAFL ++G C
Sbjct: 185 FLDPESCLPAVGQGALAIECRGSDEELLSLFSRLNDRYTQLTVTAERAFLHAMEGGC 241
>gi|26250543|ref|NP_756583.1| porphobilinogen deaminase [Escherichia coli CFT073]
gi|110644128|ref|YP_671858.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227888613|ref|ZP_04006418.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300979364|ref|ZP_07174522.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300985714|ref|ZP_07177569.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|301047316|ref|ZP_07194402.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|386631742|ref|YP_006151462.1| porphobilinogen deaminase [Escherichia coli str. 'clone D i2']
gi|386636662|ref|YP_006156381.1| porphobilinogen deaminase [Escherichia coli str. 'clone D i14']
gi|386641437|ref|YP_006108235.1| porphobilinogen deaminase [Escherichia coli ABU 83972]
gi|422364124|ref|ZP_16444652.1| porphobilinogen deaminase [Escherichia coli MS 153-1]
gi|422373941|ref|ZP_16454236.1| porphobilinogen deaminase [Escherichia coli MS 60-1]
gi|422381313|ref|ZP_16461481.1| porphobilinogen deaminase [Escherichia coli MS 57-2]
gi|432383700|ref|ZP_19626624.1| porphobilinogen deaminase [Escherichia coli KTE15]
gi|432389608|ref|ZP_19632486.1| porphobilinogen deaminase [Escherichia coli KTE16]
gi|432414067|ref|ZP_19656719.1| porphobilinogen deaminase [Escherichia coli KTE39]
gi|432438760|ref|ZP_19681136.1| porphobilinogen deaminase [Escherichia coli KTE188]
gi|432458945|ref|ZP_19701118.1| porphobilinogen deaminase [Escherichia coli KTE201]
gi|432473157|ref|ZP_19715192.1| porphobilinogen deaminase [Escherichia coli KTE206]
gi|432493055|ref|ZP_19734883.1| porphobilinogen deaminase [Escherichia coli KTE214]
gi|432506695|ref|ZP_19748412.1| porphobilinogen deaminase [Escherichia coli KTE220]
gi|432516192|ref|ZP_19753406.1| porphobilinogen deaminase [Escherichia coli KTE224]
gi|432526276|ref|ZP_19763387.1| porphobilinogen deaminase [Escherichia coli KTE230]
gi|432571077|ref|ZP_19807581.1| porphobilinogen deaminase [Escherichia coli KTE53]
gi|432595016|ref|ZP_19831326.1| porphobilinogen deaminase [Escherichia coli KTE60]
gi|432605240|ref|ZP_19841449.1| porphobilinogen deaminase [Escherichia coli KTE67]
gi|432613806|ref|ZP_19849962.1| porphobilinogen deaminase [Escherichia coli KTE72]
gi|432648474|ref|ZP_19884258.1| porphobilinogen deaminase [Escherichia coli KTE86]
gi|432653457|ref|ZP_19889193.1| porphobilinogen deaminase [Escherichia coli KTE87]
gi|432658039|ref|ZP_19893735.1| porphobilinogen deaminase [Escherichia coli KTE93]
gi|432701318|ref|ZP_19936461.1| porphobilinogen deaminase [Escherichia coli KTE169]
gi|432734557|ref|ZP_19969378.1| porphobilinogen deaminase [Escherichia coli KTE45]
gi|432747777|ref|ZP_19982438.1| porphobilinogen deaminase [Escherichia coli KTE43]
gi|432761642|ref|ZP_19996129.1| porphobilinogen deaminase [Escherichia coli KTE46]
gi|432785789|ref|ZP_20019964.1| porphobilinogen deaminase [Escherichia coli KTE63]
gi|432940622|ref|ZP_20138523.1| porphobilinogen deaminase [Escherichia coli KTE183]
gi|432974076|ref|ZP_20162918.1| porphobilinogen deaminase [Escherichia coli KTE207]
gi|432976027|ref|ZP_20164858.1| porphobilinogen deaminase [Escherichia coli KTE209]
gi|432987649|ref|ZP_20176359.1| porphobilinogen deaminase [Escherichia coli KTE215]
gi|432997586|ref|ZP_20186165.1| porphobilinogen deaminase [Escherichia coli KTE218]
gi|433002181|ref|ZP_20190698.1| porphobilinogen deaminase [Escherichia coli KTE223]
gi|433060327|ref|ZP_20247357.1| porphobilinogen deaminase [Escherichia coli KTE124]
gi|433080016|ref|ZP_20266530.1| porphobilinogen deaminase [Escherichia coli KTE131]
gi|433084730|ref|ZP_20271174.1| porphobilinogen deaminase [Escherichia coli KTE133]
gi|433089530|ref|ZP_20275887.1| porphobilinogen deaminase [Escherichia coli KTE137]
gi|433103401|ref|ZP_20289469.1| porphobilinogen deaminase [Escherichia coli KTE145]
gi|433117734|ref|ZP_20303512.1| porphobilinogen deaminase [Escherichia coli KTE153]
gi|433127437|ref|ZP_20312976.1| porphobilinogen deaminase [Escherichia coli KTE160]
gi|433141510|ref|ZP_20326746.1| porphobilinogen deaminase [Escherichia coli KTE167]
gi|433146440|ref|ZP_20331569.1| porphobilinogen deaminase [Escherichia coli KTE168]
gi|433151463|ref|ZP_20336457.1| porphobilinogen deaminase [Escherichia coli KTE174]
gi|433190609|ref|ZP_20374694.1| porphobilinogen deaminase [Escherichia coli KTE88]
gi|433200568|ref|ZP_20384448.1| porphobilinogen deaminase [Escherichia coli KTE94]
gi|433214833|ref|ZP_20398405.1| porphobilinogen deaminase [Escherichia coli KTE99]
gi|26110973|gb|AAN83157.1|AE016769_272 Porphobilinogen deaminase [Escherichia coli CFT073]
gi|110345720|gb|ABG71957.1| porphobilinogen deaminase [Escherichia coli 536]
gi|227834452|gb|EEJ44918.1| hydroxymethylbilane synthase [Escherichia coli 83972]
gi|300300835|gb|EFJ57220.1| porphobilinogen deaminase [Escherichia coli MS 185-1]
gi|300308036|gb|EFJ62556.1| porphobilinogen deaminase [Escherichia coli MS 200-1]
gi|300407988|gb|EFJ91526.1| porphobilinogen deaminase [Escherichia coli MS 45-1]
gi|307555929|gb|ADN48704.1| porphobilinogen deaminase [Escherichia coli ABU 83972]
gi|315293155|gb|EFU52507.1| porphobilinogen deaminase [Escherichia coli MS 153-1]
gi|324007476|gb|EGB76695.1| porphobilinogen deaminase [Escherichia coli MS 57-2]
gi|324014708|gb|EGB83927.1| porphobilinogen deaminase [Escherichia coli MS 60-1]
gi|355422641|gb|AER86838.1| porphobilinogen deaminase [Escherichia coli str. 'clone D i2']
gi|355427561|gb|AER91757.1| porphobilinogen deaminase [Escherichia coli str. 'clone D i14']
gi|430902984|gb|ELC24729.1| porphobilinogen deaminase [Escherichia coli KTE16]
gi|430903088|gb|ELC24832.1| porphobilinogen deaminase [Escherichia coli KTE15]
gi|430932517|gb|ELC52938.1| porphobilinogen deaminase [Escherichia coli KTE39]
gi|430959639|gb|ELC77950.1| porphobilinogen deaminase [Escherichia coli KTE188]
gi|430978965|gb|ELC95754.1| porphobilinogen deaminase [Escherichia coli KTE201]
gi|430995323|gb|ELD11620.1| porphobilinogen deaminase [Escherichia coli KTE206]
gi|431030679|gb|ELD43685.1| porphobilinogen deaminase [Escherichia coli KTE214]
gi|431034590|gb|ELD46516.1| porphobilinogen deaminase [Escherichia coli KTE220]
gi|431037902|gb|ELD48872.1| porphobilinogen deaminase [Escherichia coli KTE224]
gi|431047336|gb|ELD57337.1| porphobilinogen deaminase [Escherichia coli KTE230]
gi|431096857|gb|ELE02312.1| porphobilinogen deaminase [Escherichia coli KTE53]
gi|431125516|gb|ELE27918.1| porphobilinogen deaminase [Escherichia coli KTE60]
gi|431144262|gb|ELE45969.1| porphobilinogen deaminase [Escherichia coli KTE67]
gi|431146043|gb|ELE47642.1| porphobilinogen deaminase [Escherichia coli KTE72]
gi|431177484|gb|ELE77408.1| porphobilinogen deaminase [Escherichia coli KTE86]
gi|431186574|gb|ELE86114.1| porphobilinogen deaminase [Escherichia coli KTE87]
gi|431188150|gb|ELE87649.1| porphobilinogen deaminase [Escherichia coli KTE93]
gi|431239697|gb|ELF34169.1| porphobilinogen deaminase [Escherichia coli KTE169]
gi|431270544|gb|ELF61707.1| porphobilinogen deaminase [Escherichia coli KTE45]
gi|431289677|gb|ELF80418.1| porphobilinogen deaminase [Escherichia coli KTE43]
gi|431305318|gb|ELF93647.1| porphobilinogen deaminase [Escherichia coli KTE46]
gi|431325695|gb|ELG13076.1| porphobilinogen deaminase [Escherichia coli KTE63]
gi|431459672|gb|ELH39964.1| porphobilinogen deaminase [Escherichia coli KTE183]
gi|431478380|gb|ELH58128.1| porphobilinogen deaminase [Escherichia coli KTE207]
gi|431485161|gb|ELH64825.1| porphobilinogen deaminase [Escherichia coli KTE209]
gi|431493822|gb|ELH73414.1| porphobilinogen deaminase [Escherichia coli KTE215]
gi|431501777|gb|ELH80753.1| porphobilinogen deaminase [Escherichia coli KTE218]
gi|431504453|gb|ELH83079.1| porphobilinogen deaminase [Escherichia coli KTE223]
gi|431565574|gb|ELI38653.1| porphobilinogen deaminase [Escherichia coli KTE124]
gi|431592981|gb|ELI63546.1| porphobilinogen deaminase [Escherichia coli KTE131]
gi|431597316|gb|ELI67223.1| porphobilinogen deaminase [Escherichia coli KTE133]
gi|431600476|gb|ELI70146.1| porphobilinogen deaminase [Escherichia coli KTE137]
gi|431615732|gb|ELI84854.1| porphobilinogen deaminase [Escherichia coli KTE145]
gi|431630333|gb|ELI98670.1| porphobilinogen deaminase [Escherichia coli KTE153]
gi|431639672|gb|ELJ07522.1| porphobilinogen deaminase [Escherichia coli KTE160]
gi|431655363|gb|ELJ22396.1| porphobilinogen deaminase [Escherichia coli KTE167]
gi|431657080|gb|ELJ24048.1| porphobilinogen deaminase [Escherichia coli KTE168]
gi|431666777|gb|ELJ33402.1| porphobilinogen deaminase [Escherichia coli KTE174]
gi|431701566|gb|ELJ66481.1| porphobilinogen deaminase [Escherichia coli KTE88]
gi|431716614|gb|ELJ80721.1| porphobilinogen deaminase [Escherichia coli KTE94]
gi|431731276|gb|ELJ94782.1| porphobilinogen deaminase [Escherichia coli KTE99]
Length = 320
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 78/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TY-LLDKTILPC--- 32
E AL+ DIAVHSMKDVP TY LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|308273123|emb|CBX29726.1| Porphobilinogen deaminase [uncultured Desulfobacterium sp.]
Length = 323
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E++L + IDIAVHSMKD+P L D + +RE
Sbjct: 81 EQSLADSSIDIAVHSMKDMPADLHDGLCIGAIPERENPRDVLISGKGLLLSQLPEGALVG 140
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R+ KL G I A + A AG+K L + + +T
Sbjct: 141 TSSLRRIAQIKRIRPDLVIAPLRGNLDTRINKLEMGEIDAIILAAAGVKRLGLEKIITEY 200
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ML AV QGA+ I +D ++ ++ +NH TR V+ ERAFL ++G C
Sbjct: 201 LNEDTMLPAVGQGALCIEIRKDDHDISGFINEMNHFVTRAVVLGERAFLKRIEGGC 256
>gi|215489131|ref|YP_002331562.1| porphobilinogen deaminase [Escherichia coli O127:H6 str. E2348/69]
gi|432443334|ref|ZP_19685666.1| porphobilinogen deaminase [Escherichia coli KTE189]
gi|432448478|ref|ZP_19690773.1| porphobilinogen deaminase [Escherichia coli KTE191]
gi|432804038|ref|ZP_20037987.1| porphobilinogen deaminase [Escherichia coli KTE84]
gi|433016122|ref|ZP_20204448.1| porphobilinogen deaminase [Escherichia coli KTE104]
gi|433025713|ref|ZP_20213678.1| porphobilinogen deaminase [Escherichia coli KTE106]
gi|215267203|emb|CAS11651.1| hydroxymethylbilane synthase HemC [Escherichia coli O127:H6 str.
E2348/69]
gi|430962755|gb|ELC80607.1| porphobilinogen deaminase [Escherichia coli KTE189]
gi|430970863|gb|ELC87908.1| porphobilinogen deaminase [Escherichia coli KTE191]
gi|431345129|gb|ELG32056.1| porphobilinogen deaminase [Escherichia coli KTE84]
gi|431526208|gb|ELI02967.1| porphobilinogen deaminase [Escherichia coli KTE104]
gi|431530149|gb|ELI06834.1| porphobilinogen deaminase [Escherichia coli KTE106]
Length = 320
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 78/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TY-LLDKTILPC--- 32
E AL+ DIAVHSMKDVP TY LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|289550573|ref|YP_003471477.1| porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
gi|289180105|gb|ADC87350.1| Porphobilinogen deaminase [Staphylococcus lugdunensis HKU09-01]
Length = 310
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+ L N EID A+HS+KDVP+ L + L C RE
Sbjct: 65 QHELFNKEIDFAIHSLKDVPSILPEGLTLGCIPDRENPFDAYIAKNHTPLDQLPDGSIIG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTN 73
GN+ RL KL A + A AGLK + +++ VT
Sbjct: 125 TSSLRRGAQILAKYPNLEIKWIRGNIDTRLHKLETENYDAIILAAAGLKRMGWSDDIVTT 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D +L A+ QGA+GI C S+D ++ L +++++ V ER FL +DGSC
Sbjct: 185 YLDKDVLLPAIGQGALGIECRSDDVELLALLKQVHNQQVADCVTAERTFLAAMDGSC 241
>gi|194438640|ref|ZP_03070728.1| porphobilinogen deaminase [Escherichia coli 101-1]
gi|442596906|ref|ZP_21014707.1| Porphobilinogen deaminase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|194422444|gb|EDX38443.1| porphobilinogen deaminase [Escherichia coli 101-1]
gi|441654654|emb|CCQ00620.1| Porphobilinogen deaminase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
Length = 318
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 72 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDA--LPAGSI 129
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 130 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 189
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 190 AALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGC 247
>gi|94969590|ref|YP_591638.1| porphobilinogen deaminase [Candidatus Koribacter versatilis
Ellin345]
gi|123256362|sp|Q1INI6.1|HEM3_ACIBL RecName: Full=Porphobilinogen deaminase; Short=PBG; AltName:
Full=Hydroxymethylbilane synthase; Short=HMBS; AltName:
Full=Pre-uroporphyrinogen synthase
gi|94551640|gb|ABF41564.1| hydroxymethylbilane synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 311
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 71/176 (40%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL G++D+AVHS+KD+PT L L +RE
Sbjct: 63 EEALAAGKVDVAVHSLKDLPTELPQGFELAAVTKRENPRDVFLSVKYDSISGLPQGAKVG 122
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV R+RKL +G A + A AGL L T+ V I
Sbjct: 123 TSSLRRQAQIKAIRPDLEIFPLRGNVDTRVRKLEQGEYDAIILAFAGLNRLGKTQLVKEI 182
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D M A QGA+GI D +M + L LN + R ERA L L G C
Sbjct: 183 ISEDVMCPAAGQGALGIEIRLGDTRMREILSFLNDYDARATTTAERALLNQLGGGC 238
>gi|291612739|ref|YP_003522896.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
gi|291582851|gb|ADE10509.1| porphobilinogen deaminase [Sideroxydans lithotrophicus ES-1]
Length = 314
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPC----------------------------- 32
E AL NG DIAVHS+KDVP L + L C
Sbjct: 73 ETALENGSADIAVHSLKDVPMNLPEGFALACIGEREDPRDAFVSNRFDNLAALPAGSVVG 132
Query: 33 --NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNVQ RLRKL+EG A + A AGLK L + E + +
Sbjct: 133 TSSLRRESQLRARFPHLKIEPLRGNVQTRLRKLDEGQYAAIILAAAGLKRLGLGERIRAV 192
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ L AV QGA+GI ++ + L L+H +T V+ ERA L GSC
Sbjct: 193 ISSDESLPAVGQGALGIETRADRPDLKAVLAPLHHADTAACVLAERAMSRALAGSC 248
>gi|432907626|ref|ZP_20116009.1| porphobilinogen deaminase [Escherichia coli KTE194]
gi|433040820|ref|ZP_20228404.1| porphobilinogen deaminase [Escherichia coli KTE113]
gi|431427121|gb|ELH09164.1| porphobilinogen deaminase [Escherichia coli KTE194]
gi|431547903|gb|ELI22196.1| porphobilinogen deaminase [Escherichia coli KTE113]
Length = 320
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 78/178 (43%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVP-------------------------TY-LLDKTILPC--- 32
E AL+ DIAVHSMKDVP TY LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNTYDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDARTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|434387489|ref|YP_007098100.1| porphobilinogen deaminase [Chamaesiphon minutus PCC 6605]
gi|428018479|gb|AFY94573.1| porphobilinogen deaminase [Chamaesiphon minutus PCC 6605]
Length = 344
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +++ D+AVHS+KD+PT L + +L C +RE
Sbjct: 83 EVKILDRSADLAVHSLKDLPTNLPEGLMLGCVTERENPADALVVNAKHAGAQLETLPPGA 142
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GNV RL KL+ G A + A AGL+ L+ + +
Sbjct: 143 VIGTSSLRRLAQLRHHFPHFVFKDVRGNVNTRLAKLDAGEYDALILAAAGLQRLDFGDRI 202
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P + L AV QGA+GI C + D ++ + L +L H+ T ERAFL L+G C
Sbjct: 203 HQLIPAELSLHAVGQGALGIECRTEDPEILEILQTLQHQPTAYRCYAERAFLRELEGGC 261
>gi|432795063|ref|ZP_20029134.1| porphobilinogen deaminase [Escherichia coli KTE78]
gi|432796574|ref|ZP_20030607.1| porphobilinogen deaminase [Escherichia coli KTE79]
gi|431335470|gb|ELG22608.1| porphobilinogen deaminase [Escherichia coli KTE78]
gi|431347745|gb|ELG34623.1| porphobilinogen deaminase [Escherichia coli KTE79]
Length = 320
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 76/178 (42%), Gaps = 51/178 (28%)
Query: 2 EEALINGEIDIAVHSMKDVPTYL--------------------------LDKTILPC--- 32
E AL+ DIAVHSMKDVP LD LP
Sbjct: 74 EVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNFDSLDA--LPAGSI 131
Query: 33 ----NLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVT 72
+L+R+ GNV RL KL+ G A + A+AGLK L + +
Sbjct: 132 VGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIR 191
Query: 73 NILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C +D + + L +LNH ET V ERA L+G C
Sbjct: 192 AALPPEISLPAVGQGAVGIECRLDDTRTRELLAALNHHETALRVTAERAMNTRLEGGC 249
>gi|387891032|ref|YP_006321330.1| porphobilinogen deaminase [Escherichia blattae DSM 4481]
gi|414595324|ref|ZP_11444950.1| porphobilinogen deaminase [Escherichia blattae NBRC 105725]
gi|386925865|gb|AFJ48819.1| porphobilinogen deaminase [Escherichia blattae DSM 4481]
gi|403193745|dbj|GAB82602.1| porphobilinogen deaminase [Escherichia blattae NBRC 105725]
Length = 314
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E AL++G DIAVHSMKDVP + TI LP
Sbjct: 67 ELALLDGRADIAVHSMKDVPVAFPEGLGLVTICERDDPRDAFVSNDYASLDALPPGSIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNV RL KL+ G A + A AGL+ L + + ++
Sbjct: 127 TSSLRRQCQIAARRPDLVIRSLRGNVGTRLSKLDGGDYHAIILAAAGLRRLGLESRIRSL 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ L AV QGA+G+ C +D ++L +LNH T V ERA L+G C
Sbjct: 187 LTPEESLPAVGQGAVGVECRLDDTTTRRFLAALNHSATATRVTAERAMNIRLEGGC 242
>gi|422589621|ref|ZP_16664282.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330876446|gb|EGH10595.1| porphobilinogen deaminase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 313
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL+ DIAVHSMKDVP L C +RE
Sbjct: 67 ETALLEDNADIAVHSMKDVPMDFPQGLGLFCICEREDPRDAFVSNTFESLDALPAGSIVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RL KL+ G A + A AGL L + +T+
Sbjct: 127 TSSLRRQAQLLARRPDLEIRFLRGNVNTRLAKLDGGEYDAIILAAAGLIRLGFEDRITSA 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +DD L A QGA+GI C S D ++ L L+HE+T V+ ER+ L+G C
Sbjct: 187 ISVDDSLPAGGQGAVGIECRSVDAEIHALLAPLHHEDTAVRVIAERSLNKHLNGGC 242
>gi|15668749|ref|NP_247548.1| porphobilinogen deaminase [Methanocaldococcus jannaschii DSM 2661]
gi|2495178|sp|Q57989.1|HEM3_METJA RecName: Full=Probable porphobilinogen deaminase; Short=PBG;
AltName: Full=Hydroxymethylbilane synthase; Short=HMBS;
AltName: Full=Pre-uroporphyrinogen synthase
gi|1591276|gb|AAB98563.1| porphobilinogen deaminase (hemC) [Methanocaldococcus jannaschii DSM
2661]
Length = 292
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 47/173 (27%)
Query: 4 ALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE-------------------------- 37
A++N EIDIAVHS+KD+PT + ++ L+R+
Sbjct: 62 AMLNNEIDIAVHSLKDIPTIWNENLMVGAVLERDSYHDLLIWNKDIDFNEDSKIVIGTSS 121
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNILPI 77
GNV RLRKL EG+ A + + AG+ L ++ N +
Sbjct: 122 MRRRAFLKFIYPNAKFELLRGNVDTRLRKLKEGLYDAIVLSEAGIIRLGVSLEDFNYKRL 181
Query: 78 DDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A AQG I +AC +D++M L +NHE T +CER L G C
Sbjct: 182 D-ILPAPAQGIIAVACKRDDEEMKSILKEINHERTYLESLCERTALNEFGGGC 233
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,794,478,072
Number of Sequences: 23463169
Number of extensions: 61212206
Number of successful extensions: 160290
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3382
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 152384
Number of HSP's gapped (non-prelim): 7171
length of query: 130
length of database: 8,064,228,071
effective HSP length: 96
effective length of query: 34
effective length of database: 10,106,731,143
effective search space: 343628858862
effective search space used: 343628858862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)