BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038122
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43082|HEM3_PEA Porphobilinogen deaminase, chloroplastic OS=Pisum sativum GN=HEMC
PE=1 SV=1
Length = 369
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 115/177 (64%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING+IDIAVHSMKDVPTYL ++TILPCNL RE
Sbjct: 127 DEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPAGSVIG 186
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RLRKL+EGV++ATL ALAGLK LNMTENVT+
Sbjct: 187 TASLRRKSQILHRYPSLTVQDNFRGNVQTRLRKLSEGVVKATLLALAGLKRLNMTENVTS 246
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L IDDML AVAQGAIGIAC SND KMA+YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 247 TLSIDDMLPAVAQGAIGIACRSNDDKMAEYLASLNHEETRLAISCERAFLTTLDGSC 303
>sp|Q43316|HEM3_ARATH Porphobilinogen deaminase, chloroplastic OS=Arabidopsis thaliana
GN=HEMC PE=1 SV=1
Length = 382
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 109/177 (61%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
+EALING IDIAVHSMKDVPTYL +KTILPCNL RE
Sbjct: 140 DEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVG 199
Query: 38 ------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTN 73
GNVQ RL KL G +QATL ALAGLK L+MTENV +
Sbjct: 200 TASLRRKSQILHKYPALHVEENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVAS 259
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
IL +D+ML AVAQGAIGIAC ++D KMA YL SLNHEETR A+ CERAFL TLDGSC
Sbjct: 260 ILSLDEMLPAVAQGAIGIACRTDDDKMATYLASLNHEETRLAISCERAFLETLDGSC 316
>sp|Q6H6D2|HEM3_ORYSJ Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp.
japonica GN=HEMC PE=2 SV=1
Length = 358
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 102/176 (57%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
++AL+ G IDIAVHSMKDVPTYL + TILPCNL RE
Sbjct: 115 DDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVG 174
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL EG + ATL ALAGLK LNM E T++
Sbjct: 175 SASLRRQSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSV 234
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D+ML AVAQGAIGIAC S+D M YL SLNHE+TR AV CER FL LDG+C
Sbjct: 235 LSVDEMLPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNC 290
>sp|Q1QQP5|HEM3_NITHX Porphobilinogen deaminase OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=hemC PE=3 SV=1
Length = 316
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G ID AVHS KDVPT+L D T LP L RE
Sbjct: 74 EEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSIVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRKL G ATL ALAGL L + + T I
Sbjct: 134 TASLRRQAMVLRLRPDLKVSVIRGNVETRLRKLVAGEADATLLALAGLNRLGLQDRATRI 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ L AV QGAI I +D ++ ++ ++ ET A+ ER+FL LDGSC
Sbjct: 194 LETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDSETEVALSAERSFLALLDGSC 249
>sp|Q3SVF3|HEM3_NITWN Porphobilinogen deaminase OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=hemC PE=3 SV=1
Length = 316
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G ID AVHS KDVPT+L D T LP L RE
Sbjct: 74 EEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK++ G ATL ALAGL L + + T I
Sbjct: 134 TASLRRQAMVLKLRPDLKVNSLRGNVETRLRKISVGEADATLLALAGLNRLGLQDKATRI 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D+ L AV QGAI I +D ++ ++ ++ ET A+ ER+FL LDGSC
Sbjct: 194 LETDEFLPAVGQGAIAIESRRDDDRINAFVKAIGDPETEVALSAERSFLALLDGSC 249
>sp|Q98EI7|HEM3_RHILO Porphobilinogen deaminase OS=Rhizobium loti (strain MAFF303099)
GN=hemC PE=3 SV=1
Length = 308
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL+ G IDIAVHS KD+PT L D L L RE
Sbjct: 68 EEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFVGKAAKTIADLLRGAKVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EGV T+ A AGLK L + T++
Sbjct: 128 SSSLRRQALIRRMRPDLDVVMFRGNVQTRLRKLDEGVAAGTILAYAGLKRLGLEHVATDL 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+D A QGAIGI D+ + K L +++ T QA+ CERAFL LDGSC
Sbjct: 188 MPLDIFPPAPGQGAIGIETRIGDRAVEKMLVAIHDVPTGQALACERAFLAALDGSC 243
>sp|Q0BX92|HEM3_HYPNA Porphobilinogen deaminase OS=Hyphomonas neptunium (strain ATCC
15444) GN=hemC PE=3 SV=1
Length = 321
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 89/177 (50%), Gaps = 49/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
++AL GE+D+AVHS+KDVP+ L I LP
Sbjct: 75 DDALSRGELDLAVHSLKDVPSVLPPGQIFAAFPKREDPRDGFLSHGAKSIQDLPEGATLG 134
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+RE GNV R+RKL EG+ AT A+AGL L ++E T I
Sbjct: 135 TASLRREAQALALRPDLKVVTFRGNVATRMRKLEEGLADATFLAMAGLTRLGLSEVATPI 194
Query: 75 LPIDDMLLAVAQGAIGIACTSN-DKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P++DML A QG IG+ + D ++ + LG L+HE +R A + ERAFL LDGSC
Sbjct: 195 -PLEDMLPAAGQGIIGVVTRDDVDTELLEILGQLSHEPSRVAAIAERAFLEKLDGSC 250
>sp|Q747I1|HEM3_GEOSL Porphobilinogen deaminase OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=hemC PE=3 SV=1
Length = 318
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 82/175 (46%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLVCITEREDPRDAFISNGVTFANLPQGAKIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+RKL E + A + A AGLK L T+ VT L
Sbjct: 127 SALRRQAQLLKVRPDLEMVIIRGNVETRIRKLTEDKLDAVILAAAGLKRLGFTDVVTEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P+D L A+ QGA+G+ C +D+ + + + NH +T AV ERA L +G C
Sbjct: 187 PVDLSLPAIGQGALGLECRLDDQAVRETIDFFNHPDTAHAVRAERALLWRCEGGC 241
>sp|B1I4L8|HEM3_DESAP Porphobilinogen deaminase OS=Desulforudis audaxviator (strain
MP104C) GN=hemC PE=3 SV=1
Length = 309
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 90/176 (51%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LPC----- 32
E+AL++ EID+AVHSMKD+PT L + + LP
Sbjct: 66 EQALLHREIDLAVHSMKDLPTGLPEGLVIGAVSVREYPGDVFISRGGERLEELPAGAVLG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNVQ RLRKL+EGV+ A + A AGL L +TE VT+
Sbjct: 126 TSSLRRTAQLLAYRPDLQVIPVRGNVQTRLRKLDEGVVDALVLAWAGLFRLGLTERVTHR 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P+ L AV QGA+GI ++D ++ + L +++H TR AV ER L L+G C
Sbjct: 186 IPVAMCLPAVGQGALGIEARADDAEILEMLRTIDHAPTRAAVQAERTLLRRLEGGC 241
>sp|Q8YJB0|HEM3_BRUME Porphobilinogen deaminase OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=hemC PE=3 SV=2
Length = 314
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|C0RFD1|HEM3_BRUMB Porphobilinogen deaminase OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=hemC PE=3 SV=1
Length = 314
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|Q57B08|HEM3_BRUAB Porphobilinogen deaminase OS=Brucella abortus biovar 1 (strain
9-941) GN=hemC PE=3 SV=1
Length = 314
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|Q2YLM5|HEM3_BRUA2 Porphobilinogen deaminase OS=Brucella abortus (strain 2308) GN=hemC
PE=3 SV=1
Length = 314
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|B2S842|HEM3_BRUA1 Porphobilinogen deaminase OS=Brucella abortus (strain S19) GN=hemC
PE=3 SV=1
Length = 314
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTALPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDV 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|A5VSL5|HEM3_BRUO2 Porphobilinogen deaminase OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=hemC PE=3 SV=1
Length = 304
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 64 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 123
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 124 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 183
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 184 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 239
>sp|Q8FYI6|HEM3_BRUSU Porphobilinogen deaminase OS=Brucella suis biovar 1 (strain 1330)
GN=hemC PE=3 SV=1
Length = 314
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|B0CID9|HEM3_BRUSI Porphobilinogen deaminase OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=hemC PE=3 SV=1
Length = 314
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|A9M8M2|HEM3_BRUC2 Porphobilinogen deaminase OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=hemC PE=3 SV=1
Length = 314
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G IDIAVHS KD+PT L + L L+RE
Sbjct: 74 EQALKDGRIDIAVHSTKDMPTVLPEGLHLSVFLEREDPRDAFIGRSARRFMDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL+ G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIEVVMYRGNVDTRLRKLDAGEVDGTFLACAGLRRLGLADVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L A QGAIGI D+++ L L H ET+ A+ CERAFLG LDGSC
Sbjct: 194 LDPSVFPPAPGQGAIGIESRIGDERIDVLLAPLAHRETQIALACERAFLGALDGSC 249
>sp|A1B853|HEM3_PARDP Porphobilinogen deaminase OS=Paracoccus denitrificans (strain Pd
1222) GN=hemC PE=3 SV=1
Length = 313
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL+ EIDIAVHSMKD+PT + ++ C L RE
Sbjct: 74 EDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELPQGAVVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL +GV AT A+AGL L M
Sbjct: 134 SSSLRRRAQLAARRPDLKLVEFRGNVQTRLKKLEDGVAVATFLAMAGLTRLGMLHVARGA 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ D+ML AVAQG IG+ ++D + A L +++ ++ V ERAFL LDGSC
Sbjct: 194 VEPDEMLPAVAQGCIGVERRADDARTASLLAAISDRDSALRVTAERAFLARLDGSC 249
>sp|Q5WEP5|HEM3_BACSK Porphobilinogen deaminase OS=Bacillus clausii (strain KSM-K16)
GN=hemC PE=3 SV=1
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 85/177 (48%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +GEID+AVHSMKDVP+ LL++ L +RE
Sbjct: 65 EAALRSGEIDVAVHSMKDVPSELLEEFTLAAITEREDPRDVLVSENGHTLDELPAGAIVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV+ RLRKL E A + A AGLK L E+V T
Sbjct: 125 TSSLRRSAQILHRRPDVQVKWIRGNVETRLRKLKEEDFSAIVLAAAGLKRLGYGEDVITE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L A+ QGA+G+ C +D + + L L+HEET +AV+ ERAFL ++G C
Sbjct: 185 YLDKDVCLPAIGQGALGLECRVDDVETTELLAKLHHEETGKAVLAERAFLKEMNGGC 241
>sp|Q3A009|HEM3_PELCD Porphobilinogen deaminase OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hemC PE=3 SV=1
Length = 315
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL +G ID+AVHSMKDVP+ L ILPC RE
Sbjct: 67 EEALYDGSIDLAVHSMKDVPSVLPPGLILPCIPPREDPRDALVTPDGRSFAQLPQGARIG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV+ RLRK+ E + + A AGLK L + E +
Sbjct: 127 TSALRRQAQLLHRRPDLDIVSLRGNVETRLRKMEEEDMDGIVLAAAGLKRLELAERIAEY 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L +D L A+ QGA+G+ C D + + + L+ +T AV ERAFL L+G C
Sbjct: 187 LSVDVSLPAIGQGALGLECREGDDRTLELIAPLHDADTAVAVRAERAFLRRLNGGC 242
>sp|Q8UC46|HEM3_AGRT5 Porphobilinogen deaminase OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=hemC PE=3 SV=1
Length = 309
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E L++GE+DIAVHS KD+PT L + L L RE
Sbjct: 69 ENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLELPQGAVVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V RLRKL EG ATL A AGLK L T I
Sbjct: 129 SASLRRQALIRRLRPDLNVIVFRGLVDTRLRKLEEGQADATLLAFAGLKRLGKDNVPTEI 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + A AQGAIG+ D +M K L +N T AV CERAFL LDGSC
Sbjct: 189 LDPKEFPPAPAQGAIGVESRIGDARMDKLLAPINDRPTYDAVTCERAFLAALDGSC 244
>sp|A6WXJ2|HEM3_OCHA4 Porphobilinogen deaminase OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=hemC PE=3 SV=1
Length = 314
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL +G ID+AVHS KD+PT L D L L+RE
Sbjct: 74 EQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFIGRTASRLLDLPQGATVG 133
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRKL G + T A AGL+ L + + +T++
Sbjct: 134 SSSLRRQALIRRLRPDIQVVIFRGNVDTRLRKLEAGEVDGTFLACAGLRRLGLGDVITDL 193
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ A QGAIGI D ++ L L H ET A+ CERAFL LDGSC
Sbjct: 194 ADPESFPPAPGQGAIGIETRIGDTRIDTLLAPLAHRETGIALACERAFLAALDGSC 249
>sp|A1AUE7|HEM3_PELPD Porphobilinogen deaminase OS=Pelobacter propionicus (strain DSM
2379) GN=hemC PE=3 SV=1
Length = 310
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVVSRAARFSHLPPGARVGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+RKL+E + A + A AGLK L +T+ V L
Sbjct: 127 SALRRQAQLLHARPDLEMVTIRGNVETRIRKLDEENLDAVILAAAGLKRLGLTQRVAEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++ + A+ QGA+GI C +D + + + NH +T AV ERA L G C
Sbjct: 187 DVEFSIPAIGQGALGIECRLSDPVVTEAIAFFNHPDTSHAVRAERALLRRCQGGC 241
>sp|Q39QM7|HEM3_GEOMG Porphobilinogen deaminase OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=hemC PE=3 SV=1
Length = 318
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 79/175 (45%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISRGVKFADLPQGARIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+RKL + + A + A AGL L + V+ L
Sbjct: 127 SALRRQAQILKVRPDLQMVVIRGNVETRIRKLTDENLDAVILAAAGLNRLGFADQVSEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P++ L A+ QGA+GI C +D+ + + NH +T AV ERA L +G C
Sbjct: 187 PVELSLPAIGQGALGIECRLDDETIKDTIAFFNHPDTAHAVRAERALLWRCEGGC 241
>sp|A5D3L5|HEM3_PELTS Porphobilinogen deaminase OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=hemC PE=3 SV=1
Length = 312
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ GEID+AVHSMKD+PT L + ++ +RE
Sbjct: 66 EAAMLRGEIDMAVHSMKDLPTELPEGLVIGAVCKREHPADVLVSRRGKKLDELPGGALVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ RLRKL E + A + A AGL + + +T +
Sbjct: 126 TSSLRRCAQLLWYRDDLRMVNLRGNINTRLRKLEEENLDAAVLAYAGLFRMGRQDAITQV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P D L AV QG+IG+ S+D ++ + + ++H E+R AV ERAFL L+G C
Sbjct: 186 IPFDICLPAVGQGSIGVEVRSDDGEVLELVKKIDHRESRLAVFAERAFLRRLEGGC 241
>sp|Q31PM2|HEM3_SYNE7 Porphobilinogen deaminase OS=Synechococcus elongatus (strain PCC
7942) GN=hemC PE=3 SV=1
Length = 320
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E A++ GE+D AVHS+KD+PT L + IL C +RE
Sbjct: 70 EVAMLAGEVDFAVHSLKDLPTRLPEGLILGCVTEREDPADALVVHDRFKDHQLETLPEGT 129
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A AGL+ L+M + +
Sbjct: 130 VIGTSSLRRLAQLRHHYPHLQFKDVRGNLNTRLAKLDAGEYDALILAAAGLQRLSMADRI 189
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
++P L AV QGA+GI C + D ++ + L +L HE T Q + ERAFL L+G C
Sbjct: 190 HQLIPAAVSLHAVGQGALGIECRAEDPEILELLKALEHEPTSQRCLAERAFLRELEGGC 248
>sp|C6DYY8|HEM3_GEOSM Porphobilinogen deaminase OS=Geobacter sp. (strain M21) GN=hemC
PE=3 SV=1
Length = 318
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 78/175 (44%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ GEIDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGEIDIAVHSMKDVPTEFPEGLGLYCITEREDPRDAVISNNVKFADLPQGARIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNVQ R+ KL + A + A AGL L + +T +L
Sbjct: 127 SALRRQAQLLKVRPDLEMVIIRGNVQTRMDKLKTEGLDAVILAAAGLNRLGFADQITELL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D L A+ QGA+GI C +++ + + NH +T +AV ERA L +G C
Sbjct: 187 PTDLSLPAIGQGALGIECNLSNQDVKDAISFFNHPDTSRAVRAERALLWRCEGGC 241
>sp|Q92LH7|HEM3_RHIME Porphobilinogen deaminase OS=Rhizobium meliloti (strain 1021)
GN=hemC PE=3 SV=1
Length = 309
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+ L++G++D AVHS KD+PT L + L L RE
Sbjct: 69 EQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVDLPQGATVG 128
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
G V+ RLRKL EG + TL A AGL+ L M T +
Sbjct: 129 SSSLRRQALIRRLRPDIDVITYRGQVETRLRKLAEGQVDGTLLAYAGLRRLGMEHVPTEL 188
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++ A AQGAI + D ++ L +++ T +AV CER FL TLDGSC
Sbjct: 189 LDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATLDGSC 244
>sp|B9M416|HEM3_GEOSF Porphobilinogen deaminase OS=Geobacter sp. (strain FRC-32) GN=hemC
PE=3 SV=1
Length = 318
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 78/175 (44%), Gaps = 46/175 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA++ G+IDIAVHSMKDVPT + L C +RE
Sbjct: 67 EEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGTKFADLPQGAKIGT 126
Query: 38 ----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNIL 75
GNV+ R+ KL + A + A AGLK L TE V L
Sbjct: 127 SALRRQAQLLKVRPDMEMVIIRGNVETRINKLETEKLDAVILAAAGLKRLGFTEKVAEYL 186
Query: 76 PIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
P D + A+ QGA+GI C +++++ + + NH T AV ERA L +G C
Sbjct: 187 PTDLSIPAIGQGALGIECRLDNEEVKQTIDFFNHPATAYAVRAERALLWRCEGGC 241
>sp|Q5QUS3|HEM3_IDILO Porphobilinogen deaminase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=hemC PE=3 SV=1
Length = 313
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLD----KTI--------------------LP------ 31
E A++ G DIAVHSMKD+P TI LP
Sbjct: 66 EVAMLEGRADIAVHSMKDLPVEFPPGLELHTICEREDPRDAFVSNNYKNLNELPEGAVVG 125
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R GNVQ RLRKL+EG A + A +GL L + + +T+
Sbjct: 126 TCSLRRRCQVKEQFPHLVIKDLRGNVQTRLRKLDEGEFDAIILAASGLIRLELGDRITSF 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P++ L A QGA+GI C S+D +M L L +ETR V+ ERA LDG C
Sbjct: 186 IPVEQSLPANGQGALGIECRSDDDEMKALLAPLQCQETRTRVLAERAMNRGLDGGC 241
>sp|A1WVT9|HEM3_HALHL Porphobilinogen deaminase OS=Halorhodospira halophila (strain DSM
244 / SL1) GN=hemC PE=3 SV=1
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 81/176 (46%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL------------------------DKTILP------ 31
E+ ++ GE D+AVHSMKD+P L D LP
Sbjct: 67 EDGMLRGEADLAVHSMKDIPWRLPEGFDLAAVSDRADPRDAFVSNHYSDLDELPHGARVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R+ GNVQ RLRKL++GV A + A +GL L +T +
Sbjct: 127 TASLRRQCQIMDRRPDLQIEVLRGNVQTRLRKLDDGVYDAIILAASGLDRLELTHRIAGR 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L AV QGA+GI C D+++ K + LNHE TR + ER L+GSC
Sbjct: 187 LTPEQSLPAVGQGALGIECREGDERVMKLVEGLNHEATRIRINAERGMNARLEGSC 242
>sp|Q7MQC7|HEM3_VIBVY Porphobilinogen deaminase OS=Vibrio vulnificus (strain YJ016)
GN=hemC PE=3 SV=1
Length = 312
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +ND+++ K L LNH +T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243
>sp|Q8DD85|HEM3_VIBVU Porphobilinogen deaminase OS=Vibrio vulnificus (strain CMCP6)
GN=hemC PE=3 SV=1
Length = 312
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYHHVDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKAYRPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +ND+++ K L LNH +T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRTNDERILKLLEPLNHADTADRVKCERAMNLTLEGGC 243
>sp|Q82WS2|HEM3_NITEU Porphobilinogen deaminase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=hemC PE=3 SV=1
Length = 308
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E AL +G DIAVHSMKDVP + L +RE
Sbjct: 68 ELALEDGRADIAVHSMKDVPMIVPSGFTLAAITEREDPRDAFVSNDFSSLEELPAGSVVG 127
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RLRKL+EG A + A AGLK L + ++ +
Sbjct: 128 TSSLRRESQLRARFPHLQVRPLRGNVQTRLRKLDEGEYSAIILAAAGLKRLELGYRISML 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
LP + L AV QGA+GI C ND M +++ L+H T V ERA L GSC
Sbjct: 188 LPPELSLPAVGQGALGIECRDNDPDMVEWMKPLHHAATACCVEAERAMSRMLGGSC 243
>sp|B7VMD9|HEM3_VIBSL Porphobilinogen deaminase OS=Vibrio splendidus (strain LGP32)
GN=hemC PE=3 SV=1
Length = 312
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL++G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLLEYRPDLIIKELRGNVGTRLGKLDDGQYDAIVLAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRLDDERLIKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>sp|B3QWI1|HEM3_CHLT3 Porphobilinogen deaminase OS=Chloroherpeton thalassium (strain ATCC
35110 / GB-78) GN=hemC PE=3 SV=1
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E ++ EID+AVHS+KD+PT + ++ +RE
Sbjct: 66 EHVMLRNEIDLAVHSLKDLPTETPEGLVITAITEREDNRDVLISKGKYTLKTLPQGAIVA 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GN+ R ++ EG +A L A AG+ L +E++ I
Sbjct: 126 TSSLRRRSQLLHLRPDLEVIDMRGNLNTRFKRFEEGDAEAMLLAFAGVHRLEFSEHIAEI 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ DD+L AV QGA+GI +D++ + L LNH ET CER+ L TL+G C
Sbjct: 186 ISFDDILPAVGQGALGIETRIDDEETRELLKVLNHAETELCTKCERSLLRTLEGGC 241
>sp|Q0VM28|HEM3_ALCBS Porphobilinogen deaminase OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=hemC PE=3 SV=1
Length = 310
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEA+++G DIAVHSMKDVP L LP +RE
Sbjct: 67 EEAMMDGRADIAVHSMKDVPMELPPGFALPVICEREDPRDAFVSNTFDGLSSLPHGACVG 126
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL KL+ G A + A AGLK L M + +
Sbjct: 127 TSSLRRQAQVKANRPDLVVNSLRGNVQTRLGKLDAGNFDAIILAAAGLKRLEMHDRIRYE 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+P ++ L AV QGA+GI C D+ + L L+ +T VV ERA L+G C
Sbjct: 187 MPPEESLPAVGQGAVGIECREGDESTIELLSPLSDVDTWDRVVAERAMNRRLEGGC 242
>sp|Q8CNY8|HEM3_STAES Porphobilinogen deaminase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=hemC PE=3 SV=1
Length = 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>sp|Q5HNN3|HEM3_STAEQ Porphobilinogen deaminase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=hemC PE=3 SV=1
Length = 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 78/174 (44%), Gaps = 48/174 (27%)
Query: 5 LINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE--------------------------- 37
L N EID+A+HS+KDVP+ + D L C RE
Sbjct: 68 LFNKEIDMAIHSLKDVPSMIPDGLTLGCIPDREIPFDAYIAKNHIPLQELSEGSIVGTSS 127
Query: 38 --------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTEN-VTNILP 76
GN+ RL+KL A + A AGLK + ++N VT L
Sbjct: 128 LRRGAQILSKYPHLKIKWIRGNIDTRLKKLETEDYDAIILAAAGLKRMGWSDNIVTTYLD 187
Query: 77 IDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
D +L A+ QGA+GI C S+DK++ L +++ + Q V ER FL +DGSC
Sbjct: 188 RDILLPAIGQGALGIECRSDDKELLDLLSKVHNHDVAQCVTAERTFLSEMDGSC 241
>sp|B1HVD6|HEM3_LYSSC Porphobilinogen deaminase OS=Lysinibacillus sphaericus (strain
C3-41) GN=hemC PE=3 SV=1
Length = 310
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 76/177 (42%), Gaps = 48/177 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL EID AVHSMKD+P L + ++ C RE
Sbjct: 65 EQALYEKEIDFAVHSMKDMPAVLPEGLVIGCIPPREDARDAFISKGHVKFSELPAGAVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV-TN 73
GNV RL KL A + A AGLK L +E+V T
Sbjct: 125 TSSLRRSAQLLTVRPDLEIKWIRGNVDTRLAKLETEEYDAIILAAAGLKRLGWSEDVVTE 184
Query: 74 ILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L ++D L AVAQG++GI C +D ++ L L + T Q ERAFL +DG C
Sbjct: 185 FLSVEDCLPAVAQGSLGIECREDDTELLDELAKLTDQLTWQEAHAERAFLAAMDGGC 241
>sp|A7MXU9|HEM3_VIBHB Porphobilinogen deaminase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=hemC PE=3 SV=1
Length = 312
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYNNIDELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + E + +
Sbjct: 128 TCSLRRQCQLKEYRPDLVIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLELEERIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHQDTADRVRCERAMNLTLEGGC 243
>sp|Q87KI9|HEM3_VIBPA Porphobilinogen deaminase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=hemC PE=3 SV=1
Length = 312
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 84/176 (47%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP + TI LP
Sbjct: 68 EVAMLEGRADLAVHSMKDVPVDFPEGLGLVTICEREDPRDAFVSNTYSNINELPQGAVVG 127
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + + +
Sbjct: 128 TCSLRRQCQLKEYRPDIIIKELRGNVGTRLGKLDAGEYDAIILAAAGLKRLKLEDRIRSF 187
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C +D+++ K L LNH++T V+CERA TL+G C
Sbjct: 188 IEPEQSLPAVGQGAVGIECRVDDERLLKLLEPLNHKDTADRVLCERAMNLTLEGGC 243
>sp|Q8YVU6|HEM3_NOSS1 Porphobilinogen deaminase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=hemC PE=3 SV=2
Length = 323
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +IN EID AVHS+KD+PT L + L +RE
Sbjct: 73 EVGMINEEIDFAVHSLKDLPTNLPEGLALAAITERENPADALVVHENFKDKQIDTLPAGA 132
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G + A AGL+ L M + V
Sbjct: 133 VIGTSSLRRLAQLRNQFPHLTFKDVRGNLNTRLAKLDAGEYDGLILAAAGLQRLGMGDRV 192
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
ILP + L AV QGA+GI C ++D ++ L ++ H ETR + ER+FL +L+G C
Sbjct: 193 HQILPKEISLHAVGQGALGIECRADDAELITVLKAIEHPETRDRCLAERSFLRSLEGGC 251
>sp|Q8DIE4|HEM3_THEEB Porphobilinogen deaminase OS=Thermosynechococcus elongatus (strain
BP-1) GN=hemC PE=3 SV=1
Length = 320
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E +++ GE D+AVHS+KD+PT L D +L +RE
Sbjct: 70 ELSMLRGETDLAVHSLKDLPTQLPDGLVLAAITEREDPADALVLGAKWTGHTIDTLPEGT 129
Query: 38 --------------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENV 71
GN+ RL KL+ G A + A+AGL+ L + +
Sbjct: 130 VIGTSSLRRLAQLRHYYPHLTFKDVRGNLNTRLAKLDAGEYDALILAVAGLRRLGFGDRI 189
Query: 72 TNILPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ +LP L AV QGA+GI C + D + + +L H ET + ERAFL L+G C
Sbjct: 190 SQVLPATVSLYAVGQGALGIECRAEDADILALVKTLEHPETTARCLAERAFLRQLEGGC 248
>sp|Q9KVM1|HEM3_VIBCH Porphobilinogen deaminase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=hemC PE=3 SV=2
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDK----TI--------------------LP------ 31
E A++ G D+AVHSMKDVP D TI LP
Sbjct: 67 EIAMLEGRADLAVHSMKDVPVDFPDGLGLVTICEREDPRDAFVSNTYAKIEDLPSGAIVG 126
Query: 32 -CNLQRE----------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
C+L+R+ GNV RL KL+ G A + A AGLK L + + +
Sbjct: 127 TCSLRRQCQLKAARPDLVIKELRGNVGTRLSKLDAGEYDAIILAAAGLKRLELESRIRSF 186
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
+ + L AV QGA+GI C ND+++ L LNH +T V CERA TL G C
Sbjct: 187 IEPEQSLPAVGQGAVGIECRVNDQRVRALLAPLNHADTADRVRCERAMNLTLQGGC 242
>sp|Q7P207|HEM3_CHRVO Porphobilinogen deaminase OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=hemC PE=3 SV=2
Length = 309
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
E+AL++G D+AVHS+KDVP L D L +RE
Sbjct: 65 EQALMDGRADLAVHSLKDVPMTLPDGFALAAVCEREDPRDAFVSNRYQHLSELPAGSVVG 124
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNVQ RL+KL++G A + A AGLK L + E +
Sbjct: 125 TSSLRREAQLRARFPQLAVKPLRGNVQTRLKKLDDGEFDAIILAAAGLKRLGLAERIQGE 184
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A QGA+GI ++ ++ L LNH +TR ERA L GSC
Sbjct: 185 LAPSESLPAAGQGALGIEIRADRADLSALLAPLNHPDTRACTAAERALAKELGGSC 240
>sp|A9FDP9|HEM3_SORC5 Porphobilinogen deaminase OS=Sorangium cellulosum (strain So ce56)
GN=hemC PE=3 SV=1
Length = 300
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 75/176 (42%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTILPCNLQRE------------------------ 37
EEAL++ D AVHS+KDVP + L C RE
Sbjct: 66 EEALLDRRADFAVHSIKDVPAEIAPALCLACIPAREDPRDALVTRSGALLAELPAGARVG 125
Query: 38 -----------------------GNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
GNV RLRK+ +GV A + ALAGLK L + T +
Sbjct: 126 TSSLRRAVALREARPDLVIEPVRGNVDTRLRKVFDGVFDAVVLALAGLKRLGLEARATEV 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L + L A+ QGA+GI C + D + LG+L ET V ERA + ++GSC
Sbjct: 186 LSPEVSLPAIGQGALGIECRTADDSVRDVLGTLADAETTICVSAERAVMAAVEGSC 241
>sp|O69110|HEM3_PAEMA Porphobilinogen deaminase OS=Paenibacillus macerans GN=hemC PE=3
SV=1
Length = 324
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLLDKTI------------------------LP------ 31
E+A+++GEID+AVHSMKD+P+ L + I LP
Sbjct: 71 EQAMLDGEIDMAVHSMKDMPSVLPEGLINGGVPLRKDPRDALISRSGLHLHELPQGARVG 130
Query: 32 -CNLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
L+R GN+ +RLRKL E A + A AGL+ + VT
Sbjct: 131 TSTLRRSSQLLAYRPDLVLEPVRGNIDSRLRKLEEEGFDAIILAAAGLQRMGWENRVTAY 190
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D L AV QGA+GI C ND ++ L N +T V ER FL L+G C
Sbjct: 191 LSADVCLPAVGQGALGIECRENDAELRDVLSLYNDPDTALTVAAERRFLAVLNGGC 246
>sp|A7NKU8|HEM3_ROSCS Porphobilinogen deaminase OS=Roseiflexus castenholzii (strain DSM
13941 / HLO8) GN=hemC PE=3 SV=1
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 79/176 (44%), Gaps = 47/176 (26%)
Query: 2 EEALINGEIDIAVHSMKDVPTYLL-DKTILPC---------------------------- 32
EEA+ G +D+AVHS KD+P+ L D T+ C
Sbjct: 66 EEAMRAGRVDLAVHSAKDLPSTLPPDMTLAVCPRRADPRDALVAQPGMTLASLPHGARVG 125
Query: 33 --NLQR----------------EGNVQARLRKLNEGVIQATLSALAGLKCLNMTENVTNI 74
+L+R GNV RLRKL EG A + A AGLK L + E +T +
Sbjct: 126 TSSLRRACQLRALRPDLTLLDLRGNVDTRLRKLREGQYDAIVLAAAGLKRLGLEEVITEL 185
Query: 75 LPIDDMLLAVAQGAIGIACTSNDKKMAKYLGSLNHEETRQAVVCERAFLGTLDGSC 130
L D ++ AV QG IG+ + D ++ + L L+ R A+ ERAFL + G C
Sbjct: 186 LEPDVLIPAVGQGIIGVEARAGDDEVLRLLAPLDDPAARAAITAERAFLARIGGGC 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,229,583
Number of Sequences: 539616
Number of extensions: 1501645
Number of successful extensions: 5023
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3915
Number of HSP's gapped (non-prelim): 970
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)