Query 038123
Match_columns 508
No_of_seqs 336 out of 2003
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 07:49:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038123.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038123hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02854 3-ketoacyl-CoA syntha 100.0 1E-113 2E-118 918.8 42.4 480 28-508 17-512 (521)
2 PLN02192 3-ketoacyl-CoA syntha 100.0 3E-113 6E-118 913.7 35.5 479 29-508 11-499 (511)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 4E-111 1E-115 898.6 42.1 480 28-508 6-494 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 8E-103 2E-107 831.0 36.1 455 53-508 1-470 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 1.9E-95 4E-100 766.3 40.7 420 89-508 33-459 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 1.6E-75 3.5E-80 579.9 25.6 289 108-396 1-289 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.2E-57 2.5E-62 463.1 24.2 319 114-492 2-323 (323)
8 cd00831 CHS_like Chalcone and 100.0 7E-52 1.5E-56 431.9 31.1 344 116-489 2-361 (361)
9 PLN03172 chalcone synthase fam 100.0 1.3E-51 2.8E-56 433.5 32.1 348 114-492 15-387 (393)
10 PLN03169 chalcone synthase fam 100.0 8.7E-51 1.9E-55 427.7 32.3 353 109-492 15-389 (391)
11 PLN03168 chalcone synthase; Pr 100.0 3.5E-50 7.6E-55 422.5 32.6 349 114-494 14-388 (389)
12 PLN03173 chalcone synthase; Pr 100.0 2.9E-50 6.2E-55 423.1 30.9 349 114-493 15-388 (391)
13 PRK05963 3-oxoacyl-(acyl carri 100.0 4.9E-49 1.1E-53 404.7 31.7 321 114-491 2-326 (326)
14 PLN03171 chalcone synthase-lik 100.0 6.3E-49 1.4E-53 414.5 32.6 349 113-494 20-397 (399)
15 PLN03170 chalcone synthase; Pr 100.0 3.5E-49 7.7E-54 416.3 30.0 350 114-493 19-392 (401)
16 PRK12880 3-oxoacyl-(acyl carri 100.0 1E-48 2.2E-53 407.1 29.0 332 112-493 4-340 (353)
17 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.3E-48 2.8E-53 410.2 28.2 330 114-491 46-379 (379)
18 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 4.1E-47 8.8E-52 390.9 29.6 322 115-491 2-325 (326)
19 COG3424 BcsA Predicted naringe 100.0 3.2E-47 6.9E-52 373.3 27.1 346 116-493 2-354 (356)
20 PRK07204 3-oxoacyl-(acyl carri 100.0 2E-46 4.2E-51 385.8 32.8 323 114-491 3-329 (329)
21 PRK12879 3-oxoacyl-(acyl carri 100.0 2.9E-46 6.2E-51 383.4 33.0 319 114-491 3-324 (325)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 6.7E-46 1.4E-50 383.1 30.3 320 113-491 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 2.1E-45 4.6E-50 379.8 31.4 324 113-492 2-336 (339)
24 cd00830 KAS_III Ketoacyl-acyl 100.0 5.4E-45 1.2E-49 372.4 31.1 317 115-489 1-320 (320)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 8.7E-45 1.9E-49 371.5 30.2 315 115-491 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 1.8E-43 4E-48 361.7 32.3 314 115-491 3-318 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 1.7E-43 3.7E-48 371.2 29.9 345 115-492 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 1.2E-42 2.7E-47 360.7 28.9 311 115-496 2-313 (347)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 1.2E-41 2.6E-46 356.4 29.6 345 114-491 1-371 (372)
30 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 6.4E-42 1.4E-46 355.2 26.4 313 116-504 2-318 (345)
31 cd00827 init_cond_enzymes "ini 100.0 6.4E-40 1.4E-44 335.6 25.8 317 115-489 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 4.5E-36 9.8E-41 315.1 29.7 304 116-491 1-317 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 6.8E-34 1.5E-38 302.5 27.8 309 112-493 1-372 (459)
34 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.7E-31 3.8E-36 283.8 24.7 313 115-492 1-374 (454)
35 COG3425 PksG 3-hydroxy-3-methy 100.0 2.5E-31 5.4E-36 271.9 23.8 310 115-494 2-313 (377)
36 PF00195 Chal_sti_synt_N: Chal 100.0 1.6E-30 3.4E-35 252.3 15.8 203 110-314 9-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 4.8E-29 1E-33 246.0 16.1 238 190-489 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 1.8E-26 4E-31 236.5 14.4 252 190-489 11-332 (332)
39 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 4.2E-21 9.1E-26 161.2 6.5 90 393-491 1-90 (90)
40 PF02797 Chal_sti_synt_C: Chal 99.8 1.3E-19 2.8E-24 166.6 11.7 118 352-492 26-150 (151)
41 PF01154 HMG_CoA_synt_N: Hydro 99.8 5E-18 1.1E-22 157.8 13.8 167 112-313 1-172 (174)
42 PRK06147 3-oxoacyl-(acyl carri 99.7 4.4E-17 9.5E-22 169.6 19.3 309 115-492 4-343 (348)
43 KOG1393 Hydroxymethylglutaryl- 99.7 2.2E-16 4.8E-21 159.6 17.5 324 111-497 7-382 (462)
44 TIGR02845 spore_V_AD stage V s 99.7 1.4E-15 3E-20 154.0 22.2 116 190-315 50-173 (327)
45 cd00834 KAS_I_II Beta-ketoacyl 99.6 9.5E-15 2.1E-19 154.3 18.8 288 114-461 1-351 (406)
46 PRK08304 stage V sporulation p 99.6 1.3E-13 2.8E-18 140.1 20.7 237 190-482 56-313 (337)
47 cd00751 thiolase Thiolase are 99.6 5.9E-14 1.3E-18 148.2 19.1 93 190-283 22-115 (386)
48 smart00825 PKS_KS Beta-ketoacy 99.5 6.1E-13 1.3E-17 141.6 20.5 223 190-461 87-358 (424)
49 TIGR01930 AcCoA-C-Actrans acet 99.5 4.2E-13 9E-18 141.8 18.5 95 189-284 20-115 (386)
50 PRK05656 acetyl-CoA acetyltran 99.5 6.6E-13 1.4E-17 140.6 19.5 94 190-284 26-120 (393)
51 PRK09051 beta-ketothiolase; Pr 99.5 1.1E-12 2.5E-17 138.7 20.6 94 190-284 27-122 (394)
52 PRK06064 acetyl-CoA acetyltran 99.5 1.6E-12 3.5E-17 137.4 19.4 92 190-283 22-116 (389)
53 TIGR03150 fabF beta-ketoacyl-a 99.5 3.2E-12 6.8E-17 135.4 20.2 286 114-460 1-350 (407)
54 PRK07108 acetyl-CoA acetyltran 99.5 2.6E-12 5.7E-17 135.9 19.4 94 190-284 27-122 (392)
55 PRK09052 acetyl-CoA acetyltran 99.5 2.3E-12 4.9E-17 136.7 18.9 94 190-284 31-127 (399)
56 PRK06501 3-oxoacyl-(acyl carri 99.5 7.5E-12 1.6E-16 133.9 23.0 305 114-490 11-421 (425)
57 cd00829 SCP-x_thiolase Thiolas 99.5 4.7E-12 1E-16 132.9 20.2 94 189-284 15-109 (375)
58 cd00828 elong_cond_enzymes "el 99.4 3.1E-12 6.8E-17 135.6 18.8 222 189-461 71-350 (407)
59 PRK08313 acetyl-CoA acetyltran 99.4 8.6E-12 1.9E-16 131.8 20.3 92 190-283 24-117 (386)
60 PF08545 ACP_syn_III: 3-Oxoacy 99.4 3E-13 6.4E-18 111.3 6.6 79 245-335 1-79 (80)
61 PRK12578 acetyl-CoA acetyltran 99.4 1.2E-11 2.7E-16 130.5 20.5 92 190-283 21-113 (385)
62 PRK07314 3-oxoacyl-(acyl carri 99.4 1.9E-11 4.2E-16 129.8 21.5 317 114-491 2-409 (411)
63 PRK08242 acetyl-CoA acetyltran 99.4 1.4E-11 3E-16 130.6 20.2 94 190-284 28-123 (402)
64 PRK08235 acetyl-CoA acetyltran 99.4 1.1E-11 2.4E-16 131.2 18.6 94 190-284 26-120 (393)
65 PRK06205 acetyl-CoA acetyltran 99.4 1.3E-11 2.9E-16 131.1 18.8 93 190-283 26-119 (404)
66 PRK05790 putative acyltransfer 99.4 1.8E-11 3.9E-16 129.7 19.3 93 190-283 26-119 (393)
67 PRK06059 lipid-transfer protei 99.4 3E-11 6.6E-16 128.1 20.5 92 190-283 23-116 (399)
68 cd00833 PKS polyketide synthas 99.4 4.7E-11 1E-15 126.7 20.8 224 189-461 86-358 (421)
69 PRK06954 acetyl-CoA acetyltran 99.4 2.9E-11 6.3E-16 128.2 19.1 93 190-283 31-124 (397)
70 PRK06445 acetyl-CoA acetyltran 99.3 4.8E-11 1E-15 126.5 19.6 91 190-283 32-126 (394)
71 PRK06025 acetyl-CoA acetyltran 99.3 7.3E-11 1.6E-15 125.1 20.4 282 189-490 28-415 (417)
72 PRK08722 3-oxoacyl-(acyl carri 99.3 7.2E-11 1.6E-15 125.9 20.5 312 110-490 1-412 (414)
73 PRK07661 acetyl-CoA acetyltran 99.3 7E-11 1.5E-15 125.1 19.8 93 190-283 27-121 (391)
74 PRK07103 polyketide beta-ketoa 99.3 5.4E-11 1.2E-15 126.7 18.6 250 190-490 80-409 (410)
75 PRK06333 3-oxoacyl-(acyl carri 99.3 3.9E-11 8.5E-16 128.1 17.5 253 189-491 81-421 (424)
76 PRK12404 stage V sporulation p 99.3 3.7E-10 8.1E-15 114.5 20.3 116 190-314 54-176 (334)
77 PRK06158 thiolase; Provisional 99.3 2.7E-10 5.8E-15 120.4 20.0 87 190-281 28-115 (384)
78 PRK06690 acetyl-CoA acetyltran 99.3 3.6E-10 7.8E-15 118.3 20.2 245 190-492 25-360 (361)
79 PLN02287 3-ketoacyl-CoA thiola 99.3 2.8E-10 6E-15 122.5 19.4 93 190-283 71-165 (452)
80 PRK05952 3-oxoacyl-(acyl carri 99.3 4.1E-10 8.9E-15 118.8 20.3 302 114-490 2-380 (381)
81 PRK06065 acetyl-CoA acetyltran 99.2 5.7E-10 1.2E-14 118.1 21.1 91 190-282 29-121 (392)
82 PRK08256 lipid-transfer protei 99.2 3.7E-10 8E-15 119.6 18.3 90 190-283 22-111 (391)
83 PRK07851 acetyl-CoA acetyltran 99.2 4.1E-10 8.8E-15 119.8 18.6 92 190-283 27-121 (406)
84 PLN02644 acetyl-CoA C-acetyltr 99.2 5.5E-10 1.2E-14 118.4 19.3 93 190-283 25-118 (394)
85 PRK07516 acetyl-CoA acetyltran 99.2 5.7E-10 1.2E-14 118.1 19.3 92 190-283 22-116 (389)
86 PRK06633 acetyl-CoA acetyltran 99.2 4.9E-10 1.1E-14 118.6 17.6 94 190-284 27-121 (392)
87 PRK07850 acetyl-CoA acetyltran 99.2 1.1E-09 2.5E-14 115.7 19.8 94 190-284 26-121 (387)
88 PRK09116 3-oxoacyl-(acyl carri 99.2 2E-09 4.3E-14 114.6 21.7 315 114-490 2-405 (405)
89 PRK09185 3-oxoacyl-(acyl carri 99.2 3.1E-09 6.7E-14 112.6 23.0 208 226-491 137-390 (392)
90 PLN02787 3-oxoacyl-[acyl-carri 99.2 1.6E-09 3.4E-14 118.9 21.2 314 114-491 129-538 (540)
91 PRK08963 fadI 3-ketoacyl-CoA t 99.2 9.9E-10 2.1E-14 117.7 19.3 94 190-284 29-123 (428)
92 PRK08439 3-oxoacyl-(acyl carri 99.2 2E-09 4.3E-14 114.6 21.2 305 114-490 2-404 (406)
93 PLN02836 3-oxoacyl-[acyl-carri 99.2 2.8E-09 6.1E-14 114.5 22.5 253 189-490 92-434 (437)
94 PRK13359 beta-ketoadipyl CoA t 99.2 1.4E-09 3E-14 115.5 19.5 94 190-284 26-122 (400)
95 cd00832 CLF Chain-length facto 99.2 1.2E-09 2.5E-14 116.1 18.8 281 114-461 1-344 (399)
96 PRK06289 acetyl-CoA acetyltran 99.1 2.3E-09 5E-14 114.0 19.9 90 190-283 26-121 (403)
97 PRK09050 beta-ketoadipyl CoA t 99.1 1.9E-09 4.2E-14 114.5 19.0 94 190-284 26-122 (401)
98 TIGR02430 pcaF beta-ketoadipyl 99.1 2.2E-09 4.8E-14 113.9 18.8 94 190-284 25-121 (400)
99 PRK06504 acetyl-CoA acetyltran 99.1 3.9E-09 8.4E-14 111.8 20.4 94 190-284 26-121 (390)
100 PRK07801 acetyl-CoA acetyltran 99.1 3.6E-09 7.9E-14 111.7 18.9 93 190-283 26-120 (382)
101 PTZ00050 3-oxoacyl-acyl carrie 99.1 3.5E-09 7.7E-14 113.2 18.8 253 189-490 76-419 (421)
102 PRK07910 3-oxoacyl-(acyl carri 99.1 1.3E-08 2.9E-13 108.7 22.8 315 114-490 12-416 (418)
103 TIGR02446 FadI fatty oxidation 99.1 5.3E-09 1.1E-13 112.1 18.4 94 190-284 31-125 (430)
104 PRK08947 fadA 3-ketoacyl-CoA t 99.1 1E-08 2.2E-13 108.5 19.5 94 190-284 27-123 (387)
105 PRK06519 3-oxoacyl-(acyl carri 99.0 7.4E-08 1.6E-12 102.3 23.7 279 113-467 5-359 (398)
106 PRK14691 3-oxoacyl-(acyl carri 99.0 1.6E-08 3.4E-13 105.3 17.8 252 190-491 4-339 (342)
107 TIGR02445 fadA fatty oxidation 99.0 2.7E-08 5.9E-13 105.2 19.2 94 190-284 25-121 (385)
108 PRK07967 3-oxoacyl-(acyl carri 99.0 2.5E-08 5.3E-13 106.3 18.9 311 114-491 2-403 (406)
109 PRK08170 acetyl-CoA acetyltran 99.0 2.7E-09 5.9E-14 114.2 10.9 94 190-284 27-121 (426)
110 cd00826 nondecarbox_cond_enzym 98.9 5.9E-09 1.3E-13 110.6 10.6 93 190-284 23-117 (393)
111 PRK08142 acetyl-CoA acetyltran 98.9 1.4E-07 3E-12 99.9 20.4 88 190-282 25-112 (388)
112 PF00108 Thiolase_N: Thiolase, 98.9 8.7E-09 1.9E-13 103.6 10.5 96 189-285 25-121 (264)
113 PRK08257 acetyl-CoA acetyltran 98.9 1.8E-07 3.9E-12 102.1 21.5 91 190-282 27-119 (498)
114 TIGR02813 omega_3_PfaA polyket 98.8 3.5E-07 7.7E-12 115.0 21.6 217 228-493 185-463 (2582)
115 PF00109 ketoacyl-synt: Beta-k 98.8 4E-08 8.6E-13 97.2 10.5 120 189-313 86-251 (254)
116 COG0304 FabB 3-oxoacyl-(acyl-c 98.7 9.1E-07 2E-11 94.1 19.9 277 114-460 3-351 (412)
117 PRK06066 acetyl-CoA acetyltran 98.7 1.1E-06 2.4E-11 92.9 20.1 88 190-282 25-115 (385)
118 PRK08131 acetyl-CoA acetyltran 98.7 1.1E-07 2.4E-12 101.0 11.0 94 190-284 26-121 (401)
119 PRK06366 acetyl-CoA acetyltran 98.6 1.2E-07 2.7E-12 100.3 10.6 94 190-284 26-120 (388)
120 PRK06157 acetyl-CoA acetyltran 98.5 3.5E-07 7.5E-12 97.3 10.8 93 190-284 27-120 (398)
121 PTZ00455 3-ketoacyl-CoA thiola 98.5 4.3E-07 9.3E-12 97.7 11.2 94 190-284 48-152 (438)
122 PRK06365 acetyl-CoA acetyltran 98.5 5E-07 1.1E-11 97.0 10.2 92 190-283 37-130 (430)
123 PRK07937 lipid-transfer protei 98.5 8.8E-06 1.9E-10 85.2 19.0 238 191-480 25-337 (352)
124 PRK09268 acetyl-CoA acetyltran 98.4 1.1E-06 2.3E-11 94.3 10.8 94 190-284 31-125 (427)
125 PF07451 SpoVAD: Stage V sporu 98.4 3.1E-05 6.7E-10 78.1 18.3 192 190-435 51-252 (329)
126 KOG1390 Acetyl-CoA acetyltrans 98.3 2.4E-05 5.1E-10 78.9 15.1 95 190-285 30-125 (396)
127 KOG1389 3-oxoacyl CoA thiolase 98.3 1.4E-05 3E-10 80.2 13.3 280 190-498 61-430 (435)
128 COG3321 Polyketide synthase mo 98.1 9.6E-05 2.1E-09 87.5 18.8 289 114-460 4-360 (1061)
129 PRK07855 lipid-transfer protei 98.0 2.3E-05 4.9E-10 83.1 9.8 85 190-279 24-108 (386)
130 KOG1394 3-oxoacyl-(acyl-carrie 98.0 5.5E-05 1.2E-09 77.4 11.0 119 188-314 92-268 (440)
131 COG0183 PaaJ Acetyl-CoA acetyl 97.6 0.00018 4E-09 76.4 9.4 95 190-285 27-125 (392)
132 PF08540 HMG_CoA_synt_C: Hydro 97.3 0.00026 5.6E-09 71.8 5.3 60 435-494 143-204 (282)
133 KOG1406 Peroxisomal 3-ketoacyl 96.9 0.0012 2.5E-08 65.4 5.1 89 191-284 30-119 (408)
134 KOG1391 Acetyl-CoA acetyltrans 95.7 0.02 4.3E-07 56.7 6.1 92 190-284 28-123 (396)
135 PF08541 ACP_syn_III_C: 3-Oxoa 94.4 0.044 9.6E-07 45.5 3.5 76 202-281 1-79 (90)
136 KOG1392 Acetyl-CoA acetyltrans 94.3 0.038 8.1E-07 55.5 3.3 94 190-284 66-160 (465)
137 TIGR00748 HMG_CoA_syn_Arc hydr 93.7 0.25 5.4E-06 51.6 8.4 84 189-278 205-293 (345)
138 PRK06025 acetyl-CoA acetyltran 93.2 0.3 6.5E-06 52.5 8.1 91 195-312 318-416 (417)
139 PRK06816 3-oxoacyl-(acyl carri 93.2 0.39 8.3E-06 50.8 8.9 88 190-281 270-365 (378)
140 PF13723 Ketoacyl-synt_2: Beta 92.9 2 4.4E-05 42.1 12.8 115 189-315 33-172 (218)
141 KOG1202 Animal-type fatty acid 92.2 0.51 1.1E-05 55.7 8.4 255 190-496 87-420 (2376)
142 PRK09258 3-oxoacyl-(acyl carri 92.1 0.52 1.1E-05 48.7 8.0 87 188-281 235-327 (338)
143 PRK05963 3-oxoacyl-(acyl carri 92.1 0.32 6.9E-06 50.0 6.4 86 188-280 223-314 (326)
144 PRK07204 3-oxoacyl-(acyl carri 91.4 0.43 9.3E-06 49.1 6.5 84 189-279 227-316 (329)
145 cd00825 decarbox_cond_enzymes 91.2 0.8 1.7E-05 46.8 8.3 78 192-269 205-286 (332)
146 TIGR00747 fabH 3-oxoacyl-(acyl 90.2 0.74 1.6E-05 47.1 6.9 84 189-279 216-305 (318)
147 PRK04262 hypothetical protein; 90.0 0.75 1.6E-05 47.9 6.9 68 192-263 209-281 (347)
148 PRK06366 acetyl-CoA acetyltran 89.9 1.1 2.4E-05 47.6 8.2 92 389-491 291-386 (388)
149 PRK12879 3-oxoacyl-(acyl carri 89.8 1.1 2.3E-05 46.0 7.7 83 190-279 223-311 (325)
150 PLN02326 3-oxoacyl-[acyl-carri 89.8 0.77 1.7E-05 48.6 6.8 84 189-279 277-366 (379)
151 PRK06840 hypothetical protein; 89.3 1 2.3E-05 46.5 7.3 80 193-279 238-322 (339)
152 PRK09352 3-oxoacyl-(acyl carri 88.9 0.86 1.9E-05 46.6 6.2 84 189-279 216-305 (319)
153 PRK08131 acetyl-CoA acetyltran 88.8 1.7 3.7E-05 46.5 8.6 66 389-461 302-369 (401)
154 PF02803 Thiolase_C: Thiolase, 88.3 0.63 1.4E-05 41.6 4.1 94 389-490 28-122 (123)
155 cd00830 KAS_III Ketoacyl-acyl 88.2 1.3 2.9E-05 45.0 7.1 85 188-279 219-309 (320)
156 cd00327 cond_enzymes Condensin 88.2 2.1 4.6E-05 41.7 8.3 78 192-269 145-226 (254)
157 PRK13359 beta-ketoadipyl CoA t 87.8 2.1 4.6E-05 45.8 8.5 94 194-312 298-399 (400)
158 PRK09050 beta-ketoadipyl CoA t 87.5 1.3 2.9E-05 47.3 6.8 94 194-312 299-400 (401)
159 PRK07515 3-oxoacyl-(acyl carri 87.2 1.8 3.9E-05 45.5 7.6 86 188-279 267-358 (372)
160 CHL00203 fabH 3-oxoacyl-acyl-c 87.1 1.8 4E-05 44.6 7.3 81 192-279 226-312 (326)
161 PRK08242 acetyl-CoA acetyltran 86.9 1.4 3E-05 47.2 6.5 91 195-312 303-401 (402)
162 TIGR02430 pcaF beta-ketoadipyl 85.4 2.6 5.6E-05 45.1 7.6 70 194-267 298-375 (400)
163 PRK06147 3-oxoacyl-(acyl carri 84.7 2.1 4.5E-05 44.9 6.4 87 194-280 236-330 (348)
164 PF02803 Thiolase_C: Thiolase, 84.3 5.7 0.00012 35.4 8.1 70 194-269 24-101 (123)
165 COG0332 FabH 3-oxoacyl-[acyl-c 83.3 1.8 3.9E-05 44.9 5.2 87 186-278 217-308 (323)
166 PRK08170 acetyl-CoA acetyltran 83.0 4.7 0.0001 43.5 8.4 26 389-420 313-338 (426)
167 PRK09052 acetyl-CoA acetyltran 82.8 4.5 9.8E-05 43.3 8.1 93 193-312 298-398 (399)
168 PRK07850 acetyl-CoA acetyltran 82.1 7.3 0.00016 41.5 9.4 92 194-312 287-386 (387)
169 PRK06205 acetyl-CoA acetyltran 82.1 2.2 4.7E-05 45.7 5.3 94 194-312 300-402 (404)
170 PRK05656 acetyl-CoA acetyltran 81.7 2.7 5.9E-05 44.8 5.9 50 194-249 293-342 (393)
171 PRK09051 beta-ketothiolase; Pr 81.4 3 6.5E-05 44.5 6.1 92 194-312 294-393 (394)
172 PRK06445 acetyl-CoA acetyltran 81.3 4.3 9.4E-05 43.2 7.3 67 194-266 294-368 (394)
173 COG1214 Inactive homolog of me 80.8 5.5 0.00012 39.1 7.3 59 191-249 38-97 (220)
174 PRK06690 acetyl-CoA acetyltran 80.5 8.1 0.00018 40.8 8.9 70 193-268 259-336 (361)
175 PRK06954 acetyl-CoA acetyltran 80.4 2.4 5.2E-05 45.2 5.0 92 194-312 297-396 (397)
176 PLN02287 3-ketoacyl-CoA thiola 80.4 3.7 8E-05 44.7 6.5 96 194-315 333-437 (452)
177 PRK07851 acetyl-CoA acetyltran 80.1 5 0.00011 43.0 7.3 92 194-312 305-404 (406)
178 cd00831 CHS_like Chalcone and 79.9 4.1 8.8E-05 42.6 6.5 88 188-279 255-350 (361)
179 cd00826 nondecarbox_cond_enzym 79.6 3.1 6.7E-05 44.4 5.5 69 388-463 274-360 (393)
180 PTZ00455 3-ketoacyl-CoA thiola 78.4 12 0.00026 40.6 9.5 39 389-433 315-353 (438)
181 COG3425 PksG 3-hydroxy-3-methy 78.2 7.6 0.00017 41.1 7.7 83 190-278 207-296 (377)
182 PRK12880 3-oxoacyl-(acyl carri 78.2 4.7 0.0001 42.3 6.3 82 189-278 239-324 (353)
183 PRK07661 acetyl-CoA acetyltran 78.0 3.3 7.1E-05 44.2 5.1 92 194-312 291-390 (391)
184 PLN03169 chalcone synthase fam 77.4 7.2 0.00016 41.6 7.5 88 190-279 279-375 (391)
185 PRK08235 acetyl-CoA acetyltran 77.2 4.4 9.5E-05 43.2 5.8 68 194-267 293-368 (393)
186 cd00827 init_cond_enzymes "ini 76.1 9.6 0.00021 38.7 7.8 88 186-281 217-315 (324)
187 PRK07855 lipid-transfer protei 74.6 14 0.00031 39.2 8.8 40 389-434 272-311 (386)
188 TIGR02445 fadA fatty oxidation 74.4 5.9 0.00013 42.1 5.8 42 194-239 282-323 (385)
189 PRK08947 fadA 3-ketoacyl-CoA t 73.5 6 0.00013 42.1 5.7 70 194-267 284-362 (387)
190 PRK06157 acetyl-CoA acetyltran 73.3 16 0.00035 38.9 8.9 68 389-463 272-359 (398)
191 PRK07801 acetyl-CoA acetyltran 72.4 7.4 0.00016 41.2 6.0 67 195-267 283-357 (382)
192 PRK08257 acetyl-CoA acetyltran 71.1 12 0.00025 41.4 7.3 79 194-278 294-382 (498)
193 PF01135 PCMT: Protein-L-isoas 70.8 8 0.00017 37.6 5.4 42 446-487 49-90 (209)
194 PRK07108 acetyl-CoA acetyltran 70.6 4 8.6E-05 43.6 3.5 92 194-312 292-391 (392)
195 cd00751 thiolase Thiolase are 70.3 7.2 0.00016 41.3 5.4 42 194-239 287-328 (386)
196 PRK06504 acetyl-CoA acetyltran 69.3 11 0.00024 40.2 6.5 53 194-253 290-342 (390)
197 PRK05790 putative acyltransfer 68.7 8.9 0.00019 40.7 5.7 68 194-267 293-368 (393)
198 TIGR01835 HMG-CoA-S_prok 3-hyd 68.2 12 0.00027 39.5 6.6 73 189-262 202-286 (379)
199 PF02801 Ketoacyl-synt_C: Beta 66.2 5.4 0.00012 34.8 2.9 67 388-461 30-103 (119)
200 PF02801 Ketoacyl-synt_C: Beta 66.1 2.1 4.6E-05 37.4 0.2 76 194-269 27-110 (119)
201 TIGR01930 AcCoA-C-Actrans acet 65.4 15 0.00033 38.9 6.6 48 195-249 289-337 (386)
202 cd00829 SCP-x_thiolase Thiolas 65.2 22 0.00047 37.2 7.7 43 194-240 253-295 (375)
203 PRK09268 acetyl-CoA acetyltran 65.0 34 0.00073 37.0 9.2 27 389-421 315-341 (427)
204 PRK06059 lipid-transfer protei 64.7 32 0.0007 36.6 9.0 40 195-239 276-316 (399)
205 cd00834 KAS_I_II Beta-ketoacyl 64.0 13 0.00029 39.1 5.8 77 193-269 276-358 (406)
206 PRK09185 3-oxoacyl-(acyl carri 64.0 30 0.00065 36.7 8.5 75 195-269 263-340 (392)
207 TIGR03725 bact_YeaZ universal 62.8 9.7 0.00021 36.6 4.2 37 190-226 33-69 (202)
208 PLN02644 acetyl-CoA C-acetyltr 62.6 15 0.00031 39.2 5.8 67 195-267 294-368 (394)
209 PRK09604 UGMP family protein; 61.3 30 0.00064 36.1 7.7 35 190-224 51-85 (332)
210 TIGR00329 gcp_kae1 metallohydr 60.7 28 0.0006 35.7 7.3 37 190-226 48-84 (305)
211 PRK07516 acetyl-CoA acetyltran 59.7 19 0.00042 38.1 6.2 69 194-267 262-355 (389)
212 PLN03168 chalcone synthase; Pr 59.4 20 0.00042 38.3 6.1 78 388-477 108-189 (389)
213 PLN03173 chalcone synthase; Pr 59.1 22 0.00047 38.0 6.4 78 388-477 109-190 (391)
214 PRK06633 acetyl-CoA acetyltran 58.6 15 0.00033 39.2 5.2 67 194-268 292-368 (392)
215 PRK06064 acetyl-CoA acetyltran 58.1 30 0.00064 36.7 7.2 41 194-239 260-301 (389)
216 PLN03170 chalcone synthase; Pr 57.8 30 0.00066 37.0 7.3 78 388-477 113-194 (401)
217 PF00814 Peptidase_M22: Glycop 57.8 15 0.00032 37.1 4.6 58 191-248 30-88 (268)
218 PRK07314 3-oxoacyl-(acyl carri 56.7 19 0.0004 38.3 5.4 76 194-269 278-359 (411)
219 PRK06519 3-oxoacyl-(acyl carri 56.6 34 0.00074 36.6 7.4 44 194-238 282-326 (398)
220 cd00828 elong_cond_enzymes "el 56.6 20 0.00042 38.0 5.6 78 192-269 274-357 (407)
221 PF00195 Chal_sti_synt_N: Chal 56.4 20 0.00044 35.4 5.2 80 388-479 107-190 (226)
222 PLN03172 chalcone synthase fam 55.4 24 0.00052 37.7 6.0 79 388-478 109-191 (393)
223 COG0533 QRI7 Metal-dependent p 55.4 40 0.00087 35.3 7.3 89 186-281 47-137 (342)
224 PTZ00050 3-oxoacyl-acyl carrie 54.5 35 0.00077 36.5 7.2 77 193-269 284-368 (421)
225 PLN00415 3-ketoacyl-CoA syntha 54.4 25 0.00055 38.4 5.9 77 389-477 142-222 (466)
226 TIGR03150 fabF beta-ketoacyl-a 54.1 26 0.00056 37.0 6.0 45 194-238 277-322 (407)
227 PF08392 FAE1_CUT1_RppA: FAE1/ 53.3 30 0.00066 35.4 6.0 79 388-478 90-172 (290)
228 PRK14878 UGMP family protein; 52.9 24 0.00051 36.6 5.3 39 186-225 41-79 (323)
229 TIGR03723 bact_gcp putative gl 52.7 47 0.001 34.3 7.5 56 190-249 49-109 (314)
230 PRK14691 3-oxoacyl-(acyl carri 52.6 35 0.00076 35.7 6.5 46 193-238 207-253 (342)
231 PRK08256 lipid-transfer protei 52.0 38 0.00083 35.9 6.8 43 194-240 266-308 (391)
232 PLN02787 3-oxoacyl-[acyl-carri 51.5 34 0.00074 38.2 6.6 76 194-269 407-487 (540)
233 COG0304 FabB 3-oxoacyl-(acyl-c 51.1 28 0.0006 37.5 5.6 44 194-237 278-322 (412)
234 PLN02192 3-ketoacyl-CoA syntha 51.0 36 0.00078 37.7 6.5 78 388-477 183-264 (511)
235 COG4126 Hydantoin racemase [Am 50.4 1.3E+02 0.0029 29.6 9.6 95 154-269 124-218 (230)
236 PLN02932 3-ketoacyl-CoA syntha 50.3 34 0.00074 37.6 6.2 78 388-477 155-236 (478)
237 PRK08304 stage V sporulation p 50.2 63 0.0014 33.8 7.8 89 194-284 210-315 (337)
238 cd00832 CLF Chain-length facto 50.1 31 0.00068 36.7 5.8 76 193-269 271-351 (399)
239 PRK06501 3-oxoacyl-(acyl carri 49.2 40 0.00086 36.3 6.5 76 194-269 291-372 (425)
240 PRK12578 acetyl-CoA acetyltran 48.9 38 0.00082 35.9 6.2 41 194-239 259-300 (385)
241 PRK05952 3-oxoacyl-(acyl carri 48.7 38 0.00083 36.0 6.2 75 193-269 255-334 (381)
242 PLN02377 3-ketoacyl-CoA syntha 48.6 39 0.00084 37.4 6.4 78 388-477 179-260 (502)
243 PRK06158 thiolase; Provisional 47.8 52 0.0011 34.9 7.1 41 194-239 256-297 (384)
244 PRK12404 stage V sporulation p 47.7 75 0.0016 33.2 7.8 89 194-284 208-313 (334)
245 smart00825 PKS_KS Beta-ketoacy 47.6 54 0.0012 34.8 7.2 46 193-238 280-326 (424)
246 cd02185 AroH Chorismate mutase 47.3 61 0.0013 28.7 6.1 60 189-251 17-78 (117)
247 PLN03171 chalcone synthase-lik 46.8 50 0.0011 35.3 6.8 78 388-477 115-196 (399)
248 PRK06289 acetyl-CoA acetyltran 46.1 74 0.0016 33.9 7.9 42 194-239 278-319 (403)
249 TIGR01796 CM_mono_aroH monofun 45.1 63 0.0014 28.6 5.8 59 189-251 17-78 (117)
250 PRK08313 acetyl-CoA acetyltran 45.0 83 0.0018 33.4 8.1 42 193-239 256-300 (386)
251 PRK07937 lipid-transfer protei 44.2 61 0.0013 34.1 6.8 77 196-278 250-334 (352)
252 PRK08722 3-oxoacyl-(acyl carri 43.0 50 0.0011 35.4 6.1 44 194-237 280-324 (414)
253 TIGR03722 arch_KAE1 universal 42.6 37 0.00081 35.1 4.9 37 186-223 42-78 (322)
254 PLN02854 3-ketoacyl-CoA syntha 42.2 43 0.00094 37.2 5.5 77 389-477 196-276 (521)
255 PF07736 CM_1: Chorismate muta 41.8 73 0.0016 28.3 5.8 57 188-248 16-75 (118)
256 PRK00768 nadE NAD synthetase; 41.7 3.9E+02 0.0085 27.1 13.1 150 134-308 3-179 (268)
257 cd00833 PKS polyketide synthas 40.8 58 0.0013 34.4 6.1 78 192-269 279-365 (421)
258 PTZ00340 O-sialoglycoprotein e 39.7 57 0.0012 34.3 5.7 58 191-249 50-109 (345)
259 PRK09116 3-oxoacyl-(acyl carri 39.7 57 0.0012 34.9 5.9 44 194-237 277-321 (405)
260 KOG2708 Predicted metalloprote 39.6 79 0.0017 31.5 6.2 85 191-281 50-135 (336)
261 PRK06333 3-oxoacyl-(acyl carri 39.5 50 0.0011 35.2 5.4 44 194-237 290-334 (424)
262 PRK07910 3-oxoacyl-(acyl carri 38.2 65 0.0014 34.6 6.0 45 194-238 288-333 (418)
263 PRK06066 acetyl-CoA acetyltran 38.1 1.2E+02 0.0025 32.5 7.8 41 195-239 259-301 (385)
264 PRK08963 fadI 3-ketoacyl-CoA t 37.8 1.2E+02 0.0026 32.7 8.1 25 194-218 311-335 (428)
265 PF07451 SpoVAD: Stage V sporu 37.4 35 0.00077 35.2 3.6 87 194-282 205-307 (329)
266 KOG2707 Predicted metalloprote 37.1 87 0.0019 33.0 6.3 49 191-239 83-136 (405)
267 PRK09605 bifunctional UGMP fam 37.1 53 0.0012 36.3 5.3 37 186-223 45-81 (535)
268 KOG1391 Acetyl-CoA acetyltrans 36.6 63 0.0014 32.6 5.1 42 389-436 299-340 (396)
269 TIGR02845 spore_V_AD stage V s 36.1 1.1E+02 0.0024 32.0 6.9 89 194-284 204-308 (327)
270 KOG1406 Peroxisomal 3-ketoacyl 35.6 35 0.00076 34.5 3.2 30 190-219 270-300 (408)
271 PLN02836 3-oxoacyl-[acyl-carri 35.4 1.8E+02 0.0038 31.4 8.9 25 194-218 301-325 (437)
272 TIGR02446 FadI fatty oxidation 32.8 91 0.002 33.7 6.1 24 195-218 314-337 (430)
273 PRK08329 threonine synthase; V 32.2 94 0.002 32.5 5.9 55 429-483 288-345 (347)
274 KOG1389 3-oxoacyl CoA thiolase 30.8 1.1E+02 0.0024 31.8 5.9 71 195-270 323-400 (435)
275 COG2518 Pcm Protein-L-isoaspar 29.5 51 0.0011 32.2 3.1 39 446-486 51-89 (209)
276 PRK13410 molecular chaperone D 28.3 1.4E+02 0.0031 34.2 7.0 63 194-260 311-373 (668)
277 PRK09585 anmK anhydro-N-acetyl 27.6 1.3E+02 0.0029 31.9 6.1 64 185-248 64-137 (365)
278 PF08745 UPF0278: UPF0278 fami 27.1 21 0.00045 34.6 0.0 52 119-174 41-92 (205)
279 COG1153 FwdD Formylmethanofura 26.1 95 0.0021 27.6 3.9 49 452-507 31-86 (128)
280 cd01453 vWA_transcription_fact 25.9 2.1E+02 0.0045 26.9 6.6 82 193-281 28-117 (183)
281 COG3053 CitC Citrate lyase syn 25.7 4.7E+02 0.01 27.2 9.2 105 113-237 210-314 (352)
282 KOG1394 3-oxoacyl-(acyl-carrie 23.8 90 0.002 33.1 3.8 28 194-221 303-331 (440)
283 CHL00094 dnaK heat shock prote 23.3 1.9E+02 0.0042 32.8 6.8 43 196-239 313-355 (621)
284 TIGR02435 CobG precorrin-3B sy 22.7 3.4E+02 0.0074 28.8 8.2 94 149-255 270-372 (390)
285 PLN03184 chloroplast Hsp70; Pr 22.7 2E+02 0.0044 33.0 6.9 62 195-260 349-410 (673)
286 PRK07103 polyketide beta-ketoa 21.9 1.9E+02 0.0041 30.9 6.1 24 195-218 284-307 (410)
287 PRK05183 hscA chaperone protei 21.7 2.3E+02 0.0049 32.2 6.9 63 194-260 311-373 (616)
288 PRK06365 acetyl-CoA acetyltran 21.2 2.5E+02 0.0054 30.3 6.9 69 388-463 298-386 (430)
289 PTZ00186 heat shock 70 kDa pre 20.7 2.9E+02 0.0063 31.7 7.5 63 194-260 336-398 (657)
290 PRK00290 dnaK molecular chaper 20.3 2.5E+02 0.0054 31.8 6.9 63 194-260 309-371 (627)
291 PF11385 DUF3189: Protein of u 20.2 1.6E+02 0.0036 27.1 4.5 72 163-239 48-120 (148)
No 1
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.1e-113 Score=918.78 Aligned_cols=480 Identities=53% Similarity=0.908 Sum_probs=453.0
Q ss_pred cceecccccCCccccccchhhHHhhhhHHHHhH---HHHhHHHHHHHHHHHHhcccCcccc---cCc----CChhHHHHH
Q 038123 28 SFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHG---VYLIPAPILIVIFGAQIGKLTFSDL---LPT----FDTTDAVFL 97 (508)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~ 97 (508)
.+++++|++||||++|||+||||+||||+++|+ ++++++|++ ++++.++++++++|+ |.. +++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (521)
T PLN02854 17 SAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLT-IATLVQITGLEFDTVSELWSNQALHLDTATRLTG 95 (521)
T ss_pred ceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHH-HHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHHH
Confidence 566788999999999999999999999999999 677889987 677888999998884 643 567888888
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCC
Q 038123 98 FGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCP 177 (508)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~ 177 (508)
++++++++++|+|+||++|||+||+||+|+++++++.+.|+|++...|.|++++++||+||++|||||++||+|+..++.
T Consensus 96 ~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~ 175 (521)
T PLN02854 96 SAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITSR 175 (521)
T ss_pred HHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccCC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHH
Q 038123 178 GYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGII 257 (508)
Q Consensus 178 ~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~ 257 (508)
|++.+|+++|+|++++++.|++++|+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++
T Consensus 176 ~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~ 255 (521)
T PLN02854 176 PPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLI 255 (521)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCc
Q 038123 258 AIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNR 337 (508)
Q Consensus 258 AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~ 337 (508)
||++|+++|+++++++||||++|.+|.+||.++||++++++++|||||||+||++++.++++++|+|.++++++.++|++
T Consensus 256 aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~ 335 (521)
T PLN02854 256 SIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDK 335 (521)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCC
Confidence 99999999999999999999999999999999999999999999999999999997654456789999999999999999
Q ss_pred cccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHH----HHHHhcCCCCCcccccccccEEE
Q 038123 338 SFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFT----NLLLKKKTKPYIPDYKQAFEHIC 413 (508)
Q Consensus 338 ~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~----~~l~~~gl~~y~pd~~~did~f~ 413 (508)
.|+|+++++|+.|..|+++++++|.+++++++.+++++||.|+|++|+++|+. +.|.++|+++|+|||++||||||
T Consensus 336 ~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~ 415 (521)
T PLN02854 336 NYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFC 415 (521)
T ss_pred ccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEE
Confidence 99999999988888888999999988899999999999999999999887544 55666799999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEec
Q 038123 414 ILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALR 493 (508)
Q Consensus 414 ~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~ 493 (508)
+||+|++++|.++++||+++++.++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++||||+|
T Consensus 416 iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~~ 495 (521)
T PLN02854 416 IHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKALR 495 (521)
T ss_pred ECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--CCCCCCcCCC
Q 038123 494 NVEKP--ERSPWLESSE 508 (508)
Q Consensus 494 ~~~~~--~~~~w~~~~~ 508 (508)
+++++ .+|||+||||
T Consensus 496 ~~~~~~~~~~~w~~~i~ 512 (521)
T PLN02854 496 EIPTGESTGNPWADSID 512 (521)
T ss_pred cCCccccCCCCchhhHh
Confidence 99865 6799999998
No 2
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.9e-113 Score=913.67 Aligned_cols=479 Identities=54% Similarity=0.957 Sum_probs=449.6
Q ss_pred ceecccccCCccccccchhhHHhhhhHHHHhHHHHhHHHHHHHHHHHHhcccCcccc---cCc--CChhHHHHHHHHHHH
Q 038123 29 FSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDL---LPT--FDTTDAVFLFGLLGI 103 (508)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~ 103 (508)
..+++|++||||++|+|+||||+||||+++|+++++++|++ ++++.++.+++++|+ |.. +++++++++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (511)
T PLN02192 11 IEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLV-VVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVF 89 (511)
T ss_pred cccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44577999999999999999999999999999999999987 777888999998884 654 667888888888888
Q ss_pred HHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCc
Q 038123 104 LAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNL 183 (508)
Q Consensus 104 ~~~~~~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~ 183 (508)
++++|+++||++|||+||+||+|+++++++.+.|+|+....|.|++++++||+||++|||+|++||+|+..++.|++.+|
T Consensus 90 ~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~ 169 (511)
T PLN02192 90 LSTLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCM 169 (511)
T ss_pred HHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHH
Q 038123 184 KDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 184 ~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~ 263 (508)
+++|+|+++++++|+++||+++|++|+|||+||++|++++++||++++|+++||+++++.+|||+||||+||++||++|+
T Consensus 170 ~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~ 249 (511)
T PLN02192 170 AEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAK 249 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCcccccee
Q 038123 264 DLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMH 343 (508)
Q Consensus 264 ~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~ 343 (508)
++|+++++++||||++|.+|.+||.++||+++++|++|||||||+||++++.++++++|+|.+.++++.++|++.|+|++
T Consensus 250 ~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~ 329 (511)
T PLN02192 250 HLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVT 329 (511)
T ss_pred HHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhcccee
Confidence 99999999999999999999999999999999999999999999999997655556789999999999999999999999
Q ss_pred eccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHH----HhcCCCCCcccccccccEEEEcCCCH
Q 038123 344 LKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLL----LKKKTKPYIPDYKQAFEHICILATSK 419 (508)
Q Consensus 344 ~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l----~~~gl~~y~pd~~~did~f~~Hq~~~ 419 (508)
+++|++|+.|+.|+|++|.+++.+++.+++++||.++|.+|+.++...+. -+.++++|+|+|+++|||||+||+|+
T Consensus 330 ~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr 409 (511)
T PLN02192 330 QEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGR 409 (511)
T ss_pred cccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCH
Confidence 99999999999999999999999999999999999999988765432221 13457789999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEeccCCCCC
Q 038123 420 KVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPE 499 (508)
Q Consensus 420 ~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~~~~~~ 499 (508)
+++|.++++||++++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+||++||||+|+++++.
T Consensus 410 ~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~ 489 (511)
T PLN02192 410 AVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAK 489 (511)
T ss_pred HHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred C-CCCCcCCC
Q 038123 500 R-SPWLESSE 508 (508)
Q Consensus 500 ~-~~w~~~~~ 508 (508)
+ |||+||||
T Consensus 490 ~~~~w~~~i~ 499 (511)
T PLN02192 490 EKNPWMDEIH 499 (511)
T ss_pred cCCCchhhHH
Confidence 4 99999998
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.5e-111 Score=898.64 Aligned_cols=480 Identities=51% Similarity=0.926 Sum_probs=451.2
Q ss_pred cceecccccCCccccccchhhHHhhhhHHHHhHHHHhHHHHHHHHHHHHhcccCcccc---cCc--CChhHHHHHHHHHH
Q 038123 28 SFSVRVQRRLPDFLNSVNLKYVRLGYGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDL---LPT--FDTTDAVFLFGLLG 102 (508)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~ 102 (508)
+++|++|++||||++|+|+||||+||||+++|+++++++|++ ++++.++.+++.+|+ |.. ++++++++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (502)
T PLN02377 6 EIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLI-IIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFLV 84 (502)
T ss_pred eEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999987 777888999999884 644 67788888888888
Q ss_pred HHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCC
Q 038123 103 ILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPN 182 (508)
Q Consensus 103 ~~~~~~~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~ 182 (508)
+++++|+|+||++|||+||+||+|++++++|.+.|+|+.+..|.|++++++||+||+++|||++++|+|+..++.|++.+
T Consensus 85 ~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~ 164 (502)
T PLN02377 85 FGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPS 164 (502)
T ss_pred HHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccch
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHH
Q 038123 183 LKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLA 262 (508)
Q Consensus 183 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA 262 (508)
|+++++|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++|
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA 244 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLA 244 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccce
Q 038123 263 KDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCM 342 (508)
Q Consensus 263 ~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~ 342 (508)
+++++++++++||||++|++|.+|+.++++++++++++|||||||+||++++.++++++|++.++++++.++|++.|+|+
T Consensus 245 ~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i 324 (502)
T PLN02377 245 KDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCV 324 (502)
T ss_pred HHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCcccee
Confidence 99999999999999999999999998888899999999999999999999765555678999999999999999999999
Q ss_pred eeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHH-HHHH---hcCCCCCcccccccccEEEEcCCC
Q 038123 343 HLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFT-NLLL---KKKTKPYIPDYKQAFEHICILATS 418 (508)
Q Consensus 343 ~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~-~~l~---~~gl~~y~pd~~~did~f~~Hq~~ 418 (508)
++++|+.|+.|+++++++|.+++++++.|++++||.|+|.+|++.++. .... +..+++|.|++++||||||+||+|
T Consensus 325 ~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqgg 404 (502)
T PLN02377 325 YQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAGG 404 (502)
T ss_pred eeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCCC
Confidence 999988888899999999999999999999999999999999876432 2222 235677889999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEeccCCCC
Q 038123 419 KKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKP 498 (508)
Q Consensus 419 ~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~~~~~ 498 (508)
++++|.++++||++++++++|++++++||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+|+++++
T Consensus 405 r~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~~ 484 (502)
T PLN02377 405 RAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKPS 484 (502)
T ss_pred HHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCcCCC
Q 038123 499 ERSPWLESSE 508 (508)
Q Consensus 499 ~~~~w~~~~~ 508 (508)
.+|||+||||
T Consensus 485 ~~~~w~~~i~ 494 (502)
T PLN02377 485 NNSPWEDCID 494 (502)
T ss_pred CCCCchhhHh
Confidence 7899999998
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=7.5e-103 Score=831.05 Aligned_cols=455 Identities=49% Similarity=0.828 Sum_probs=426.3
Q ss_pred hhHHHHhHHHHhHHHHHHHHHHHHhcccCcccc---cCc--CChhHHHHHHHHHHHHHHHHHhcCCCceEEEEEeEEeCC
Q 038123 53 YGYLLSHGVYLIPAPILIVIFGAQIGKLTFSDL---LPT--FDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPP 127 (508)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~ 127 (508)
+.|+++|+++++++|++ ++++.++.+++.+++ |.. +++++++.+++++++++++|+|+||++|||+||+||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~ 79 (478)
T PLN02932 1 FNYLMAHRFKLCFLPLM-VGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPP 79 (478)
T ss_pred ChhHHHhHHHHHHHHHH-HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCc
Confidence 35789999999999987 777888899998884 544 567788888788888889999999999999999999999
Q ss_pred CCceecHHHHHHHHhhc---CCCChhh---HHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHHHHHHHHH
Q 038123 128 NELKISKKEFIEQARES---GNFNDAS---LEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDL 201 (508)
Q Consensus 128 ~~~~v~~~~~~e~~~~~---~~~~~~~---~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~a 201 (508)
+++++|.+.|+++.... |.|++++ ++||+||++||||++|||+|+..++.|++.+|+.+++|+++++++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~a 159 (478)
T PLN02932 80 SHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNL 159 (478)
T ss_pred ccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998766 7898888 99999999999999999999999888889999999999999999999999
Q ss_pred HHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc
Q 038123 202 LAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEV 281 (508)
Q Consensus 202 L~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~ 281 (508)
|+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.
T Consensus 160 L~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~ 239 (478)
T PLN02932 160 FRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTEN 239 (478)
T ss_pred HHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEee
Confidence 99999999999999999988889999999999999999899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcccccchhhH
Q 038123 282 VSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMI 361 (508)
Q Consensus 282 ~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~ 361 (508)
+|.+||.+++|+|++++++|||||||+||++++.++++++|+|.++++++.++|++.|+|+++++|++|..|+.|++++|
T Consensus 240 ~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp 319 (478)
T PLN02932 240 ITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLP 319 (478)
T ss_pred cccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccch
Confidence 99999988889999999999999999999997754456799999999999999999999999999988988999999999
Q ss_pred HhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhc----CCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHHHHH
Q 038123 362 EVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKK----KTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELME 437 (508)
Q Consensus 362 ~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~----gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~~ 437 (508)
.+++++++.|++++||.|+|++|+++|+...+.++ .++.|.|+|+++|||||+||+|++++|.++++||+++++++
T Consensus 320 ~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e 399 (478)
T PLN02932 320 MVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVE 399 (478)
T ss_pred HHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHH
Confidence 99999999999999999999999988776655533 46678999999999999999999999999999999999999
Q ss_pred HhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEeccCCCCCCCCCCcCCC
Q 038123 438 ASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPERSPWLESSE 508 (508)
Q Consensus 438 ~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~~~~~~~~~w~~~~~ 508 (508)
+|+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++|+++++.+|||+||||
T Consensus 400 ~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~ 470 (478)
T PLN02932 400 ASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWEDCLH 470 (478)
T ss_pred HHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCchhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999877899999998
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.9e-95 Score=766.27 Aligned_cols=420 Identities=47% Similarity=0.871 Sum_probs=399.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCccee
Q 038123 89 FDTTDAVFLFGLLGILAYIYLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDET 168 (508)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~ 168 (508)
+.+..|-+.+.++++++++|+++||++|||+||+||+|++++++|.+.++++....|.|++++++||+||+++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 66776766666777778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccCCCCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEec
Q 038123 169 YLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLG 248 (508)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~ 248 (508)
|.|+..+..|+.++|+++|+|+++.++.|++++|+++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+
T Consensus 113 ~~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 113 YSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eeCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 99999999899999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEE
Q 038123 249 GMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLV 328 (508)
Q Consensus 249 g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~ 328 (508)
+|||+|+++||++|+++++++++++||||++|.+|.++|+++||++++++++|||||||+||++++.++.+++|+|.+++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999988889999999999999999999999998766556899999999
Q ss_pred eeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhc----CCCCCccc
Q 038123 329 RTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKK----KTKPYIPD 404 (508)
Q Consensus 329 ~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~----gl~~y~pd 404 (508)
+++.+.+++.|.|+++.+|++|..|+.|+|++|.+++++++.|+++++|.++|++|+++|+...+.++ ++++|+||
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 99999889999999999999999999999999999999999999999999999999999887776665 47789999
Q ss_pred ccccccEEEEcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhh
Q 038123 405 YKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKC 484 (508)
Q Consensus 405 ~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~ 484 (508)
|+..++|||+|+||++|+|.++++|||+++++++||++|+|||||||+|+||+|++++++|++++||++||+|||+||+|
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~ 432 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchh
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeEEEeccCCCCCC---CCCCcCCC
Q 038123 485 NSVVWKALRNVEKPER---SPWLESSE 508 (508)
Q Consensus 485 ~sav~r~~~~~~~~~~---~~w~~~~~ 508 (508)
+++|||++|+++++.+ |||+||||
T Consensus 433 es~v~~~~~~~~~~~~~~~~~w~~~i~ 459 (466)
T PLN00415 433 NSIVWRALRTIPANESLVGNPWGDSVH 459 (466)
T ss_pred hHhHHHHhccCCcccccCCCCchhhHH
Confidence 9999999999987544 99999998
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.6e-75 Score=579.91 Aligned_cols=289 Identities=58% Similarity=1.001 Sum_probs=284.0
Q ss_pred HHhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchH
Q 038123 108 YLETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGR 187 (508)
Q Consensus 108 ~~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~ 187 (508)
|+++||++|||+||+||+|++++++|.++++++++..+.|++++++||+||+++|||+++||+|+..+..|++.++++++
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+|++.+++.|++++|+++|++|+|||+||+||+.|+|+||+++||+|+||||+++.+|||+||||+|++++|++|++||+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccC
Q 038123 268 AYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKED 347 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d 347 (508)
.+|+.+||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||.++||++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhc
Q 038123 348 AEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKK 396 (508)
Q Consensus 348 ~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~ 396 (508)
++|..|+.|+|+++.++|++++.||+++||+|+|++|+++|+..++.++
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk 289 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARK 289 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988764
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.2e-57 Score=463.12 Aligned_cols=319 Identities=20% Similarity=0.279 Sum_probs=275.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMV 193 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 193 (508)
.+++|.++|+|+|+ ++++|+++.+.... +++ ||..++||++||+..+++. ..+|
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e~--------------~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDET--------------TSDL 55 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCcc--------------HHHH
Confidence 46899999999999 89999999965543 555 5899999999999987654 6899
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGS 272 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~ 272 (508)
+++|+++||+++|++|+|||+||++| +|++++|++|++||++||+. ++.+||++ .+|+|+++||++|..++++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999996 68899999999999999998 69999999 79999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCc
Q 038123 273 YALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQ 352 (508)
Q Consensus 273 ~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~ 352 (508)
+||||++|++|+ +.+++||. ++.+|||||+|+||++.+.+ . +++.++.++|++.+++++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~---t~vlFgDGAgAvvl~~~~~~-----~---~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRD---TCVLFGDGAGAVVLEATEDD-----N---GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhcc---ceEEEcCCceEEEEecCCCC-----c---CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 67788997 68999999999999998732 1 46778889999999888776542211
Q ss_pred ccccchhhHHhhhhhhhhhHHhccCcccchhhH--HHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcC
Q 038123 353 GLSVSKDMIEVGGHALKANITTLGPLVLPVSEQ--VHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLE 430 (508)
Q Consensus 353 g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~--~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lg 430 (508)
.+. +.....+.+.|+.||...-. -..+.++|+++++++ +|||||++||+|.++++.++++|+
T Consensus 201 ----~~~------~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~------~dId~~vpHQan~ri~~~i~~~l~ 264 (323)
T COG0332 201 ----PKE------ESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP------EDIDWFVPHQANLRIIEAIAKKLG 264 (323)
T ss_pred ----ccc------cccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEccccccHHHHHHHHHHcC
Confidence 000 00012345555555543321 135678899999998 999999999999999999999999
Q ss_pred CCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEe
Q 038123 431 LTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKAL 492 (508)
Q Consensus 431 l~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~ 492 (508)
+|++++ ..++++|||||+||+|+.|+.+.++|++|+||++++.+||+|++|+++++||.
T Consensus 265 ~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 265 IPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred CCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999 69999999999999999999999999999999999999999999999999983
No 8
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=7e-52 Score=431.91 Aligned_cols=344 Identities=38% Similarity=0.528 Sum_probs=269.8
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHHhhcCC--CChhhHHHHHHHHHHhCCcceeecCC--CccCC-------CCCCCcc
Q 038123 116 IYLVDFACYRPPNELKISKKEFIEQARESGN--FNDASLEFKQRIIKNSGLGDETYLPR--AVFCP-------GYRPNLK 184 (508)
Q Consensus 116 v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~--~~~~~-------~~~~~~~ 184 (508)
+||.+++.|+|+ ++++|+++.+.+..... +.+...++.++|++++||++|+++.+ ++... ..+....
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 79999999998764211 01234555678999999999999865 33211 2244566
Q ss_pred chHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHH
Q 038123 185 DGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKD 264 (508)
Q Consensus 185 ~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~ 264 (508)
.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 78899999999999999999999999999999998777899999999999999987799999997899999999999999
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCC-ccccccccccccceEEEEEeeCCCCcc--ccccceeeEEeeeeccCCccccc
Q 038123 265 LLNAYPGSYALVVSTEVVSNTWYGGNE-VDMLLPNCFFRMGAAAVLLSSCRLDKW--RSKYEFKQLVRTHKGMDNRSFKC 341 (508)
Q Consensus 265 lL~~g~~~~aLVVs~E~~S~~~~~~~d-r~~lv~~~lfgDGAaAvLLs~~~~~~~--~~~~~L~~~~~t~~~sd~~~~~~ 341 (508)
++++++.++||||++|..|. ++++.| +.+++++++|||||+|+||++++.... ...+++.+......+.. .+.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDS---EDA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecC---CCc
Confidence 99999999999999999988 666666 766667899999999999998765321 12334332211111111 011
Q ss_pred eeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhc--CCCCCcccccccccEEEEcCCCH
Q 038123 342 MHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKK--KTKPYIPDYKQAFEHICILATSK 419 (508)
Q Consensus 342 ~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~--gl~~y~pd~~~did~f~~Hq~~~ 419 (508)
+....+ .....+.++++++....+ ++ -..+.++|+++ ++++ +|||||++||+|+
T Consensus 236 ~~~~~~-~~~~~~~~~~~v~~~~~~----~~-------------~~~i~~~L~~~~~g~~~------~did~~~~H~~~~ 291 (361)
T cd00831 236 MGWHLG-EEGLTFVLSRDVPRLVEK----NL-------------ERVLRKLLARLGIGLFK------LAFDHWCVHPGGR 291 (361)
T ss_pred eEEEEE-cceEEEEeChhHHHHHHH----HH-------------HHHHHHHhccccCCCcc------ccceEEEECCCCh
Confidence 100000 011111222222221111 11 12456788899 9998 9999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeE
Q 038123 420 KVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 420 ~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~ 489 (508)
++++.+++.||++++++++|+.++++||||+|+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 292 ~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 292 AVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
No 9
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.3e-51 Score=433.47 Aligned_cols=348 Identities=19% Similarity=0.172 Sum_probs=274.9
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCC-ChhhHHH-HHHHHHHhCCcceeecCCC----ccCC------C-CC
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNF-NDASLEF-KQRIIKNSGLGDETYLPRA----VFCP------G-YR 180 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~-~~~~~~f-~~~i~~~sGI~~r~~~~~~----~~~~------~-~~ 180 (508)
.+++|.++|+..|+ +.++++++.+.......- +....+. +.+|++++||++|+..-+. .+.. | ..
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 46899999999999 899999999987643210 1122332 5779999999999985421 1110 1 12
Q ss_pred CCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE-EEecCccchHHHHHH
Q 038123 181 PNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS-FNLGGMGCSAGIIAI 259 (508)
Q Consensus 181 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~-~dl~g~gCs~gl~AL 259 (508)
..++.+.+++.+|+.+|++++|+++|++++|||+||++|++....|+++.+|+++||+++++.+ ++++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 3455688889999999999999999999999999998876555699999999999999977766 5556 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCc--cccccccccccceEEEEEeeCCCCc-cccccceeeEEeeee-ccC
Q 038123 260 DLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEV--DMLLPNCFFRMGAAAVLLSSCRLDK-WRSKYEFKQLVRTHK-GMD 335 (508)
Q Consensus 260 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr--~~lv~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~~~t~~-~sd 335 (508)
++|++++++++.++||||++|.+|.++..+.|+ +.+++++||||||+|+||++.+... .++.|++.+...+.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 999999999999999999999999766555543 4567899999999999999865421 234567665544333 444
Q ss_pred CccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEc
Q 038123 336 NRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICIL 415 (508)
Q Consensus 336 ~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~H 415 (508)
+.....+.. ++..+.+++++|....+.+.. ++.++|++.|++. .|+++|++|
T Consensus 252 ~~~~~~i~~-----~G~~~~l~~~vp~~~~~~i~~-----------------~~~~~L~~~gl~~------~di~~~~~H 303 (393)
T PLN03172 252 GAIDGHLRE-----VGLTFHLLKDVPGLISKNIEK-----------------SLVEAFAPIGIND------WNSIFWIAH 303 (393)
T ss_pred ccccceEEc-----CCcEEEEechHHHHHHHHHHH-----------------HHHHHhhhcCCCc------cccceEEec
Confidence 432222221 123456778888766544332 3446788888886 899999999
Q ss_pred CCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHH----HhCCCCCC---CEEEEEeechHHhhhhee
Q 038123 416 ATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLE----ANAGVKRG---DRIWQTAFGSGVKCNSVV 488 (508)
Q Consensus 416 q~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~----~~gri~~G---d~vlliafGsG~~~~sav 488 (508)
|+|+++++.+++.||++++++.+|+.++++||||||+|+|+.|+++. ++|++++| |+++++|||+||+|++++
T Consensus 304 qgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~l 383 (393)
T PLN03172 304 PGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVV 383 (393)
T ss_pred CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeee
Confidence 99999999999999999999999999999999999999999999987 45788887 899999999999999999
Q ss_pred EEEe
Q 038123 489 WKAL 492 (508)
Q Consensus 489 ~r~~ 492 (508)
+||.
T Consensus 384 l~~~ 387 (393)
T PLN03172 384 LHSV 387 (393)
T ss_pred eEec
Confidence 9994
No 10
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8.7e-51 Score=427.73 Aligned_cols=353 Identities=18% Similarity=0.267 Sum_probs=265.3
Q ss_pred HhcCCCceEEEEEeEEeCCCCceecHHHHHHHHhh-cCCCChhhH-HHHHHHHHHhCCcceeecCCCc----c---CCCC
Q 038123 109 LETTPCWIYLVDFACYRPPNELKISKKEFIEQARE-SGNFNDASL-EFKQRIIKNSGLGDETYLPRAV----F---CPGY 179 (508)
Q Consensus 109 ~~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~-~~~~~~~~~-~f~~~i~~~sGI~~r~~~~~~~----~---~~~~ 179 (508)
..+.|.+++|+++|+++|+ ++++|+++.+.+.. .+. +++++ +.++||++++||++|+++.++. + ..+.
T Consensus 15 ~~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~ 91 (391)
T PLN03169 15 RAANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKC-DDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEG 91 (391)
T ss_pred ccCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcc-cCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccC
Confidence 3456788999999999999 89999999986543 221 23332 2357899999999999874321 1 0111
Q ss_pred CCC----ccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCc-eEEEecCccchH
Q 038123 180 RPN----LKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNI-NSFNLGGMGCSA 254 (508)
Q Consensus 180 ~~~----~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~-~~~dl~g~gCs~ 254 (508)
.++ +..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .++|++ +||+|
T Consensus 92 ~~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g 170 (391)
T PLN03169 92 TPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSG 170 (391)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHH
Confidence 122 333678899999999999999999999999999999888999999999999999998776 479999 79999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCC-C-ccccccccccccceEEEEEeeCCCCc-cccccceeeEEeee
Q 038123 255 GIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGN-E-VDMLLPNCFFRMGAAAVLLSSCRLDK-WRSKYEFKQLVRTH 331 (508)
Q Consensus 255 gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~-d-r~~lv~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~~~t~ 331 (508)
+++||++|.+++++++.++||||++|.+|..+.... + ....+++++|||||+|+||++++... ....+++.......
T Consensus 171 ~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ 250 (391)
T PLN03169 171 GVAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQF 250 (391)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeE
Confidence 999999999999999999999999999887554211 1 12334689999999999999865421 11223332211111
Q ss_pred eccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCccccccccc-
Q 038123 332 KGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFE- 410 (508)
Q Consensus 332 ~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did- 410 (508)
....+.. +.......| +.+.++++++....+.+. ..+.++|+++|+++ +|+|
T Consensus 251 ip~~~~~---~~~~~~~~g-~~~~~g~~v~~~~~~~~~-----------------~~i~~~L~~~gl~~------~did~ 303 (391)
T PLN03169 251 LPGTEKT---IDGRLTEEG-INFKLGRELPQKIEDNIE-----------------GFCKKLMKKAGLVE------KDYND 303 (391)
T ss_pred cCCCccc---cCceecCCc-eEEEECcHHHHHHHHHHH-----------------HHHHHHHHHcCCCC------CCCCc
Confidence 1100000 000000111 122334445443322211 24567899999997 7888
Q ss_pred -EEEEcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCC---CCCEEEEEeechHHhhhh
Q 038123 411 -HICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVK---RGDRIWQTAFGSGVKCNS 486 (508)
Q Consensus 411 -~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~---~Gd~vlliafGsG~~~~s 486 (508)
+|++||+|+++++.+++.||++++++..|++++++||||||+|+|+.|++++++++++ +||++++++||+||+|++
T Consensus 304 ~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~s~~~ 383 (391)
T PLN03169 304 LFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGITFEG 383 (391)
T ss_pred ceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccHhHHH
Confidence 9999999999999999999999999998899999999999999999999999888876 699999999999999999
Q ss_pred eeEEEe
Q 038123 487 VVWKAL 492 (508)
Q Consensus 487 av~r~~ 492 (508)
+++|+.
T Consensus 384 ~ll~~~ 389 (391)
T PLN03169 384 ILARNL 389 (391)
T ss_pred HHHhhh
Confidence 999974
No 11
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=3.5e-50 Score=422.54 Aligned_cols=349 Identities=19% Similarity=0.204 Sum_probs=263.8
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCC--CChhhHHHHHHHHHHhCCcceeecCCCc----cCC------CC-C
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGN--FNDASLEFKQRIIKNSGLGDETYLPRAV----FCP------GY-R 180 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~----~~~------~~-~ 180 (508)
.+++|.++|+-.|+ +.++++++.+.+..... -.++..+.+++|++++||+.|+..-+.+ +.. |+ .
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 56899999999999 89999999998765321 0122233357899999999999753221 110 01 2
Q ss_pred CCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCc-eEEEecCccchHHHHHH
Q 038123 181 PNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNI-NSFNLGGMGCSAGIIAI 259 (508)
Q Consensus 181 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~-~~~dl~g~gCs~gl~AL 259 (508)
..++.+.+++.+|+.+|+++||+++|++|+|||+||++|++.+..|+++.+|+++||+++++ .++|++ +||+||++||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 34556888999999999999999999999999999999765567999999999999999665 489999 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCC--CccccccccccccceEEEEEeeCCCCc-cccccceeeEEeeeec-cC
Q 038123 260 DLAKDLLNAYPGSYALVVSTEVVSNTWYGGN--EVDMLLPNCFFRMGAAAVLLSSCRLDK-WRSKYEFKQLVRTHKG-MD 335 (508)
Q Consensus 260 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~--dr~~lv~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~~~t~~~-sd 335 (508)
++|++++++++.++||||++|.+|.+|.... +.+.+++++||||||+|+||++.+... .+..+++.....+..+ ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 9999999999999999999999998664322 234456889999999999999865321 1122333322222222 22
Q ss_pred CccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEc
Q 038123 336 NRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICIL 415 (508)
Q Consensus 336 ~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~H 415 (508)
+.. . +.-++.| ..+.+++++|....+.++ .++.+++.+.+... .|+++|++|
T Consensus 251 ~~~-~---~~~~~~g-~~~~l~~~vp~~i~~~~~-----------------~~l~~~l~~~~~~~------~d~~~~v~H 302 (389)
T PLN03168 251 GAI-D---GHLTEAG-LIFHLMKDVPGLISKNIE-----------------KFLNEARKCVGSPD------WNEMFWAVH 302 (389)
T ss_pred Ccc-C---ceEecCc-eEEEECHHHHHHHHHHHH-----------------HHHHHHHHhcCCCc------cccceEEec
Confidence 210 0 1001111 234456666654433222 13445666666654 678999999
Q ss_pred CCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCC--------CEEEEEeechHHhhhhe
Q 038123 416 ATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRG--------DRIWQTAFGSGVKCNSV 487 (508)
Q Consensus 416 q~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~G--------d~vlliafGsG~~~~sa 487 (508)
|+|++|++.++++||++++++..|+.++++||||||+|+|+.|+++.++ ++++| |+++++|||+||+|+++
T Consensus 303 qgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~t~~~~ 381 (389)
T PLN03168 303 PGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGLTLEVL 381 (389)
T ss_pred CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchhhhhhh
Confidence 9999999999999999999999999999999999999999999998865 66655 89999999999999999
Q ss_pred eEEEecc
Q 038123 488 VWKALRN 494 (508)
Q Consensus 488 v~r~~~~ 494 (508)
++||..+
T Consensus 382 llr~~~~ 388 (389)
T PLN03168 382 VLRAAAN 388 (389)
T ss_pred hheeccc
Confidence 9999654
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.9e-50 Score=423.08 Aligned_cols=349 Identities=19% Similarity=0.173 Sum_probs=270.5
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCC--CChhhHHHHHHHHHHhCCcceeecCCCc----cC---C---C-CC
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGN--FNDASLEFKQRIIKNSGLGDETYLPRAV----FC---P---G-YR 180 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~----~~---~---~-~~ 180 (508)
.+++|.++|+-.|+ ++++++++.+.+..... -.+...+.+++|++++||+.|+..-+.+ +. . | ..
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 46899999999999 89999999998865321 1122233367899999999998753211 11 0 1 12
Q ss_pred CCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE-EecCccchHHHHHH
Q 038123 181 PNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF-NLGGMGCSAGIIAI 259 (508)
Q Consensus 181 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~-dl~g~gCs~gl~AL 259 (508)
..++.+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++..+ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 23556888999999999999999999999999999988755555899999999999999777554 556 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCc--cccccccccccceEEEEEeeCCCCc-cccccceeeEEeeee-ccC
Q 038123 260 DLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEV--DMLLPNCFFRMGAAAVLLSSCRLDK-WRSKYEFKQLVRTHK-GMD 335 (508)
Q Consensus 260 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr--~~lv~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~~~t~~-~sd 335 (508)
++|++++++++.++||||++|.+|.+|+.++|+ +.++++++|||||+|+||++.+... .++.|++.+...+.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999766655553 4556889999999999999854321 123466655433322 344
Q ss_pred CccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEc
Q 038123 336 NRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICIL 415 (508)
Q Consensus 336 ~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~H 415 (508)
+.....+ .. ++..+.+++++|....+.+. .++.++|+++|++. +|+|+|++|
T Consensus 252 ~~~~~~i-~~----~G~~~~l~~~vp~~~~~~~~-----------------~~i~~~L~~~gl~~------~di~~~v~H 303 (391)
T PLN03173 252 GAIDGHL-RE----VGLTFHLLKDVPGLISKNVE-----------------KSLTEAFKPLGISD------WNSLFWIAH 303 (391)
T ss_pred cceeeEE-Ec----CceEEEEecHHHHHHHHHHH-----------------HHHHHHHHhcCCCc------cccCeEEEC
Confidence 4321111 11 12345677777776543322 23457888999987 999999999
Q ss_pred CCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHh----CCCCCC---CEEEEEeechHHhhhhee
Q 038123 416 ATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEAN----AGVKRG---DRIWQTAFGSGVKCNSVV 488 (508)
Q Consensus 416 q~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~----gri~~G---d~vlliafGsG~~~~sav 488 (508)
|+|+++++.+++.||++++++..|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||++++++
T Consensus 304 qgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~l 383 (391)
T PLN03173 304 PGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVV 383 (391)
T ss_pred CCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999863 444433 889999999999999999
Q ss_pred EEEec
Q 038123 489 WKALR 493 (508)
Q Consensus 489 ~r~~~ 493 (508)
++|..
T Consensus 384 l~~~~ 388 (391)
T PLN03173 384 LHSVA 388 (391)
T ss_pred Hhhcc
Confidence 99854
No 13
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=4.9e-49 Score=404.66 Aligned_cols=321 Identities=18% Similarity=0.268 Sum_probs=254.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMV 193 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 193 (508)
.+++|+++|+|+|+ ++++++++.+..+. +++ ++.+++||++|++.++++. +.+|
T Consensus 2 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e~--------------~~~l 55 (326)
T PRK05963 2 CSSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDET--------------LSDL 55 (326)
T ss_pred CccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCCC--------------HHHH
Confidence 36899999999999 89999999987642 333 5789999999999876643 6899
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGS 272 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~ 272 (508)
+.+|++++|+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ +|+|++.||++|.++|+++ .+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~ 132 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GK 132 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CC
Confidence 99999999999999999999999986 57789999999999999997 689999995 9999999999999999987 48
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCc
Q 038123 273 YALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQ 352 (508)
Q Consensus 273 ~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~ 352 (508)
+||||++|..|. +.++.++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.++...
T Consensus 133 ~aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~~- 200 (326)
T PRK05963 133 PVLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSAR- 200 (326)
T ss_pred eEEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcCC-
Confidence 999999999886 33445554 578999999999999876421 22 3344456677777766554432110
Q ss_pred ccccchhhHHhhhhhhhhhHH-hccCcccchh-hH-HHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHc
Q 038123 353 GLSVSKDMIEVGGHALKANIT-TLGPLVLPVS-EQ-VHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNL 429 (508)
Q Consensus 353 g~~ls~d~~~~~g~al~~~i~-~~g~~vlp~s-e~-~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~L 429 (508)
+.+.+... +. ..+. ..|+.++... +. .+.+.++|+++|+++ +|||+|++||+|+++++.+.+.|
T Consensus 201 --~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~------~did~~~~h~~~~~~~~~~~~~l 267 (326)
T PRK05963 201 --PFAPERDA---SE--FLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP------QDIDRFFPHQANARIVDKVCETI 267 (326)
T ss_pred --CCcccccc---cc--cceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEeCCCCHHHHHHHHHHc
Confidence 11100000 00 0000 0111111100 00 134567889999998 99999999999999999999999
Q ss_pred CCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 430 ELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 430 gl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
|++++++ ..++++||||+|+|+|++|+++++++++++||+|++++||+|++|+++|+||
T Consensus 268 ~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 268 GIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred CCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 9999999 5899999999999999999999999999999999999999999999999986
No 14
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=6.3e-49 Score=414.50 Aligned_cols=349 Identities=20% Similarity=0.247 Sum_probs=259.8
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChh---hHHHHHHHHHHhCCcceeecCCCc----cC------C-C
Q 038123 113 PCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDA---SLEFKQRIIKNSGLGDETYLPRAV----FC------P-G 178 (508)
Q Consensus 113 ~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~---~~~f~~~i~~~sGI~~r~~~~~~~----~~------~-~ 178 (508)
+.+++|+++|+|+|+ ++++|+++.+++..... +++ ..+.+++|++++||++|+++.+++ .. . .
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 357999999999999 89999999998532110 122 122346899999999999986542 00 0 1
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCce-EEEecCccchHHHH
Q 038123 179 YRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNIN-SFNLGGMGCSAGII 257 (508)
Q Consensus 179 ~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~-~~dl~g~gCs~gl~ 257 (508)
....++.+.+.+.+|+++|++++|+++|++|+|||+||++|++....|+++.+|+++||+++++. ++++. +||+|+++
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 12234557788999999999999999999999999999987554458999999999999986653 56666 69999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCcc---ccccccccccceEEEEEeeCCCCccccccceeeEEeeeecc
Q 038123 258 AIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVD---MLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGM 334 (508)
Q Consensus 258 AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~---~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~s 334 (508)
||++|.+|+++++.++||||++|.+|..+ ++.|++ .++++++|||||+|+||++.++...+..|++.+.... .
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~---~ 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQA---I 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeE---E
Confidence 99999999999999999999999999743 334442 4456789999999999998764322234555433222 2
Q ss_pred CCccccceeeccCCCCCcccccc-hhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHH-----hcCCCCCccccccc
Q 038123 335 DNRSFKCMHLKEDAEGRQGLSVS-KDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLL-----KKKTKPYIPDYKQA 408 (508)
Q Consensus 335 d~~~~~~~~~~~d~~g~~g~~ls-~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~-----~~gl~~y~pd~~~d 408 (508)
++...+.+.+..+..+..+ .++ +.+|....+.++..+ .+.|. ..++++ +|
T Consensus 252 ~p~~~~~~~~~~~~~g~~~-~~~~~~vp~~i~~~l~~~l-----------------~~~l~~~~~~~~g~~~------~d 307 (399)
T PLN03171 252 IPESDDAINMHFTEGGLDG-NIGTRQVPGLIGDNIERCL-----------------LDAFAPLLGGDGGAEW------ND 307 (399)
T ss_pred ecCCchheEEEEEcCCceE-EECchhHHHHHHHHHHHHH-----------------HHHHHhhcccccCCCc------cc
Confidence 3333333333111111111 333 555554433322211 11222 135555 78
Q ss_pred ccEEEEcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCC--CCCC---CEEEEEeechHHh
Q 038123 409 FEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAG--VKRG---DRIWQTAFGSGVK 483 (508)
Q Consensus 409 id~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gr--i~~G---d~vlliafGsG~~ 483 (508)
++|+ +||+|+++++.++++||++++++..|+.++++||||||+|+|+.|+++.++++ +++| |+++++|||+|++
T Consensus 308 i~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt 386 (399)
T PLN03171 308 LFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLT 386 (399)
T ss_pred ceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHH
Confidence 8766 69999999999999999999999999999999999999999999999988774 6888 9999999999999
Q ss_pred hhheeEEEecc
Q 038123 484 CNSVVWKALRN 494 (508)
Q Consensus 484 ~~sav~r~~~~ 494 (508)
|++++|++.+.
T Consensus 387 ~~~~ll~~~~~ 397 (399)
T PLN03171 387 VDAMLLHASGH 397 (399)
T ss_pred HHHHHhhcccC
Confidence 99999998654
No 15
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=3.5e-49 Score=416.27 Aligned_cols=350 Identities=18% Similarity=0.187 Sum_probs=268.8
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCC-ChhhHH-HHHHHHHHhCCcceeecCCCc----cCC------C-CC
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNF-NDASLE-FKQRIIKNSGLGDETYLPRAV----FCP------G-YR 180 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~-~~~~~~-f~~~i~~~sGI~~r~~~~~~~----~~~------~-~~ 180 (508)
.+.+|.++|+-.|+ ++++++++.+.+.....- +....+ .+++|++++||+.|+..-+++ +.. | ..
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999988753211 112233 367899999999999854211 110 1 12
Q ss_pred CCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCc-eEEEecCccchHHHHHH
Q 038123 181 PNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNI-NSFNLGGMGCSAGIIAI 259 (508)
Q Consensus 181 ~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~-~~~dl~g~gCs~gl~AL 259 (508)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ .++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 23556888999999999999999999999999999988765556999999999999999765 478999 8999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeccCCCCCCCCCC--ccccccccccccceEEEEEeeCCCCc-cccccceeeEEeeeeccCC
Q 038123 260 DLAKDLLNAYPGSYALVVSTEVVSNTWYGGNE--VDMLLPNCFFRMGAAAVLLSSCRLDK-WRSKYEFKQLVRTHKGMDN 336 (508)
Q Consensus 260 ~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~d--r~~lv~~~lfgDGAaAvLLs~~~~~~-~~~~~~L~~~~~t~~~sd~ 336 (508)
++|++++++++.++||||++|.+|.++..+.+ .+.++++++|||||+|+||++.+... .++.|++........+ +.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p-~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILP-DS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEec-CC
Confidence 99999999999999999999999986644332 23456789999999999999865421 1123444432111111 11
Q ss_pred ccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcC
Q 038123 337 RSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILA 416 (508)
Q Consensus 337 ~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq 416 (508)
+.+..... .+.| ..+.+++++|....+.+. .++.++|+++|++. +|+++|++||
T Consensus 255 ~~~~~~~i--~~~G-~~~~l~~~vp~~~~~~i~-----------------~~v~~~L~~~gl~~------~di~~~v~Hq 308 (401)
T PLN03170 255 EGAIDGHL--REVG-LTFHLLKDVPGLISKNIE-----------------RSLEEAFKPLGITD------YNSIFWVAHP 308 (401)
T ss_pred cccccceE--EcCC-eEEEEehHHHHHHHHHHH-----------------HHHHHHHHhcCCCc------cccCeEEecC
Confidence 11100001 1112 234556777765443322 23457888999987 8999999999
Q ss_pred CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHH----HhCCCCCC---CEEEEEeechHHhhhheeE
Q 038123 417 TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLE----ANAGVKRG---DRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 417 ~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~----~~gri~~G---d~vlliafGsG~~~~sav~ 489 (508)
+|+++++.+++.||++++++..|+.++++||||||+|+++.|+++. ++|++++| |+++++|||+||+|+++++
T Consensus 309 gg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll 388 (401)
T PLN03170 309 GGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVL 388 (401)
T ss_pred CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHh
Confidence 9999999999999999999999999999999999999999999987 46888888 8999999999999999999
Q ss_pred EEec
Q 038123 490 KALR 493 (508)
Q Consensus 490 r~~~ 493 (508)
+|..
T Consensus 389 ~~~~ 392 (401)
T PLN03170 389 HSVP 392 (401)
T ss_pred eecc
Confidence 9943
No 16
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1e-48 Score=407.14 Aligned_cols=332 Identities=18% Similarity=0.220 Sum_probs=255.9
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHH
Q 038123 112 TPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAA 191 (508)
Q Consensus 112 ~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~ 191 (508)
+.++++|++++.|+|+ ++++++++.+.... ++.+ ..+|+.+++||.+|+++.+++ ++.
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~~--~~~~i~~~~Gi~~R~~~~~~e--------------~~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDIK--TLKRMKKVIGLNTRYICDENT--------------CVS 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cchh--hhhhhhhccCceEEEeCCCCC--------------CHH
Confidence 4578999999999999 89999976543321 2221 236788999999999987654 378
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCC
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYP 270 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~ 270 (508)
+|+.+|+++||+++|++|+|||.||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999886 67999999999999999998889999998 699999999999999999998
Q ss_pred CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCC
Q 038123 271 GSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEG 350 (508)
Q Consensus 271 ~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g 350 (508)
.+ ||||++|.+|. +.++.|+. +..+|||||+|+||++++... . . ....++++.++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~---~~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMN---LAPIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCC---ceeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999998 44556654 468999999999999765421 1 1 134567777777766654321
Q ss_pred Ccccccch-h-hHHhhhhhhhhhHHhccCcccchhhH-H-HHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHH
Q 038123 351 RQGLSVSK-D-MIEVGGHALKANITTLGPLVLPVSEQ-V-HFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQ 426 (508)
Q Consensus 351 ~~g~~ls~-d-~~~~~g~al~~~i~~~g~~vlp~se~-~-~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~ 426 (508)
..+..... + .+......-...+.+.|+.++..... + ..+.++|+++|+++ +|||+|++||+|+++++.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~------~did~~v~HQ~~~~i~~~i~ 279 (353)
T PRK12880 206 IPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE------KDIAFHLFHQSNAYLVDCIK 279 (353)
T ss_pred CCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHH
Confidence 11111100 0 00000000001122334444432211 1 35668899999998 99999999999999999999
Q ss_pred HHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEec
Q 038123 427 KNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALR 493 (508)
Q Consensus 427 ~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~ 493 (508)
++||++++++. ..++++||||||+|+|+.|+++.++|+++ +++++||+|++|+++++||.+
T Consensus 280 ~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~ 340 (353)
T PRK12880 280 EELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKD 340 (353)
T ss_pred HHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECC
Confidence 99999999982 35689999999999999999999888764 999999999999999999943
No 17
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.3e-48 Score=410.15 Aligned_cols=330 Identities=19% Similarity=0.261 Sum_probs=255.0
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMV 193 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 193 (508)
.+++|+++|.|+|+ ++++|+++.+.++. +++ +|.+++||++|+++.+++. +.+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~~--------------~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDET--------------LTSL 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCCC--------------HHHH
Confidence 47899999999999 89999999987642 332 5889999999999866542 6899
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
+.+|++++|+++|++|+|||.||++|+.....++.+..|+++||++ ++++||++ ++|++++.||++|.++|++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999998754333456789999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
||||++|.+|. +.+++|+. +..+|||||+|+||++++... .+ +..+...+++..++.+.....+....+
T Consensus 178 vLVv~~e~~s~-~~~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~~---i~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRG---TCILFGDGAGAVVLQACDDDE----DG---LLGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccC---ceEEEcceeEEEEEEEcCCCC----Cc---eEEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 45556665 356999999999999876431 12 223344556655554433221110000
Q ss_pred cc-cchhhHHhh-hhhhhhhHHhccCcccchhhH-H-HHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHc
Q 038123 354 LS-VSKDMIEVG-GHALKANITTLGPLVLPVSEQ-V-HFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNL 429 (508)
Q Consensus 354 ~~-ls~d~~~~~-g~al~~~i~~~g~~vlp~se~-~-~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~L 429 (508)
.. -..+..... .+.-..++.+.|+.++..... + +.+.++|+++|+++ +|||||++||+|+++++.+++.|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~------~dId~~v~Hq~n~~~~~~~~~~L 320 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA------ESIDWLLLHQANQRIIDAVAQRL 320 (379)
T ss_pred cccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHHHHc
Confidence 00 000000000 000011244445544432211 1 35668899999998 99999999999999999999999
Q ss_pred CCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 430 ELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 430 gl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
|++++++ ..++++||||+|||+|+.|++++++|++++||+|++++||+||+|++++|+|
T Consensus 321 gl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 321 GIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred CCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999 5789999999999999999999999999999999999999999999999986
No 18
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=4.1e-47 Score=390.88 Aligned_cols=322 Identities=17% Similarity=0.274 Sum_probs=248.2
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
.|+|+++|.|+|+ ++++++|+.+.++. ++ .+|.+++||++|++..+++ .+.+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~--------------~~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SD------HWISTRTGIKKRHLAPSST--------------SLTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCCC--------------CHHHHH
Confidence 4899999999999 89999999987652 22 2578999999999877654 268999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeE
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYA 274 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~a 274 (508)
.+|++++|+++|++|+|||.||++|+.....+..+..+++++|++ ++.+++++ ++|++++.||.+|.++|+++..++|
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~~ 133 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKNI 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999998743322345578899999998 68899999 6999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCccc
Q 038123 275 LVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGL 354 (508)
Q Consensus 275 LVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~ 354 (508)
|||++|.+|. +.++.++. +..+|||||+|+||++.+.. .+ ......+|++.++.+...........+
T Consensus 134 Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~---~~~~~~t~g~~~~~~~~~~~~~~~~~~ 200 (326)
T CHL00203 134 LVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SI---LGFKLCTDGKLNSHLQLMNKPVNNQSF 200 (326)
T ss_pred EEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------Ce---EEEEEEEcCCCcceEEecCCCCCcccc
Confidence 9999999887 44555654 46899999999999986542 12 223344566555443322110000000
Q ss_pred ccchhhHHhhhhhhhhhHHhccCcccchh--hHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCC
Q 038123 355 SVSKDMIEVGGHALKANITTLGPLVLPVS--EQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELT 432 (508)
Q Consensus 355 ~ls~d~~~~~g~al~~~i~~~g~~vlp~s--e~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~ 432 (508)
.-. ..+. +. ...+.+.|+.++... ..-..+.++|+++|+++ +|||||++||+|+++++.+++.||+|
T Consensus 201 ~~~-~~~~--~~--~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~------~did~~~~hq~~~~~~~~~~~~lgl~ 269 (326)
T CHL00203 201 GTT-KLPQ--GQ--YQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI------DEVDWFILHQANKRILEAIANRLSVP 269 (326)
T ss_pred ccc-cccc--CC--cceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHHHHhCCC
Confidence 000 0000 00 001222222222110 01134567899999998 99999999999999999999999999
Q ss_pred HHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 433 EELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 433 ~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
++++ ..++++||||+|||+|+.|++++++|++++||+|++++||+|++|+++|+||
T Consensus 270 ~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 270 NSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 9999 5899999999999999999999999999999999999999999999999998
No 19
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-47 Score=373.25 Aligned_cols=346 Identities=24% Similarity=0.284 Sum_probs=282.1
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHH-HhCCcceeecCCCccCCCC---CCCccchHHHHH
Q 038123 116 IYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIK-NSGLGDETYLPRAVFCPGY---RPNLKDGREEAA 191 (508)
Q Consensus 116 v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~-~sGI~~r~~~~~~~~~~~~---~~~~~~~~~ea~ 191 (508)
.+|.++++++|+ +++++.|+.+.+.... +.+ .-+-+.|.+. ..+|.+|+...|..++..+ ...++-+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~-~~~-~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELP-FQE-GREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhc-ccc-chHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 8999988877765432 122 2333345555 5688888877666655332 224556899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCC
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPG 271 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~ 271 (508)
++.++|.+++|+++++.|+|||+|++.|+++..+||+.++|+++||+++++..+.+.||||+++..++..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCC-ccccccccccccceEEEEEeeCCCC--ccccccceeeEEeeeeccCCccccceeeccCC
Q 038123 272 SYALVVSTEVVSNTWYGGNE-VDMLLPNCFFRMGAAAVLLSSCRLD--KWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDA 348 (508)
Q Consensus 272 ~~aLVVs~E~~S~~~~~~~d-r~~lv~~~lfgDGAaAvLLs~~~~~--~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~ 348 (508)
.+|||||.|.||.++....+ ++.++...+||||+||+|++.+... ...-++.+.+... +...|+ -+.|-+.-++
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~S-tL~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFS-TLYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccccc-ccCCcc--ccccceeecC
Confidence 99999999999998766554 3478899999999999999986542 1112233333222 222222 2334443333
Q ss_pred CCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHH
Q 038123 349 EGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKN 428 (508)
Q Consensus 349 ~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~ 428 (508)
+| ..+.||+|+|......++.|++ .+|+.+++.. +||++|+.|+||++|++.+++.
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~-----------------~fL~~~~ls~------~dI~~w~~HPGG~KVida~~~s 290 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVT-----------------TFLATHGLSI------EDIEAWVVHPGGPKVIDAYEES 290 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHH-----------------HHHHHcCCch------hhhceeeeCCCCchHHHHHHHh
Confidence 33 3567899999876555555543 5788899987 9999999999999999999999
Q ss_pred cCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEec
Q 038123 429 LELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALR 493 (508)
Q Consensus 429 Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~ 493 (508)
||++++.++.||..|.+|||+||+++++.|.+.++++ .++|.+.++++||+||+...++++|.+
T Consensus 291 Lgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 291 LGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred cCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 9999999999999999999999999999999999987 799999999999999999999999975
No 20
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2e-46 Score=385.84 Aligned_cols=323 Identities=17% Similarity=0.234 Sum_probs=248.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMV 193 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 193 (508)
+.++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|++.. ++ .+.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~--------------~~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GE--------------TSSYM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CC--------------CHHHH
Confidence 46899999999999 89999999987642 333 578899999999987 33 26899
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCC-CceEEEecCccchHHHHHHHHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRH-NINSFNLGGMGCSAGIIAIDLAKDLLNAYPG 271 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~-~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~ 271 (508)
+.+|++++|+++|++|+|||+||+++ ++++..|+++.+|++++|+++ +++++|++ ++|++++.||++|..++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999986 566678999999999999985 47999999 6999999999999999999999
Q ss_pred CeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCC
Q 038123 272 SYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGR 351 (508)
Q Consensus 272 ~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~ 351 (508)
++||||++|..|. ..+..++. +..+|||||+|+||++.+.. .++ +.++..+++..++....+..+..
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~~~~- 201 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNE---SCILFGDGAAAVVITKGDHS-----SRI---LASHMETYSSGAHLSEIRGGGTM- 201 (329)
T ss_pred CEEEEEEeccccC-CCCcccCc---ceEEEecccEEEEEEEcCCC-----CcE---EEEEEEEecCCCCceEEecCCcC-
Confidence 9999999999886 33334433 46899999999999986542 233 33333444443332222211100
Q ss_pred cccccchhhHHhhhhhhhhhHHhccCcccchhh-HH-HHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHc
Q 038123 352 QGLSVSKDMIEVGGHALKANITTLGPLVLPVSE-QV-HFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNL 429 (508)
Q Consensus 352 ~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se-~~-~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~L 429 (508)
..-+.+.....+ ...+.+.|+.++.... .+ +.+.++|+++|+++ +|||+|++||+|+++++.+++.|
T Consensus 202 --~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~------~did~~~~H~~~~~~~~~i~~~l 270 (329)
T PRK07204 202 --IHPREYSEERKE---DFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL------ADIDLIVPHQASGPAMRLIRKKL 270 (329)
T ss_pred --CCCccccccccc---CceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEeCCCCHHHHHHHHHHc
Confidence 000000000000 0001111222221111 11 34568899999998 99999999999999999999999
Q ss_pred CCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 430 ELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 430 gl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
+++++++ ..++++||||+|+|+|++|+++.++|++++||+|++++||+|++|+++++++
T Consensus 271 ~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 271 GVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred CCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 9999998 5899999999999999999999999999999999999999999999999985
No 21
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.9e-46 Score=383.40 Aligned_cols=319 Identities=17% Similarity=0.239 Sum_probs=253.7
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMV 193 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 193 (508)
.+++|.++++|+|+ ++++++++.+..+. +++ ++.+++||++|++.++++. +.+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~--------------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY--------------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC--------------HHHH
Confidence 46899999999999 89999999986542 333 5888999999999876642 6899
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGS 272 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~ 272 (508)
+.+|++++|+++|++|++||.||+++ ++++..|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999886 46778899999999999997 68999999 69999999999999999999999
Q ss_pred eEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCc
Q 038123 273 YALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQ 352 (508)
Q Consensus 273 ~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~ 352 (508)
+||||++|.+|. +.+..++. ..++|||||+|+||++++.. .+ +..+...++++.++.++.+..+.
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~--- 199 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRT---TCILFGDGAGAVVLEATENE-----PG---FIDYVLGTDGDGGDILYRTGLGT--- 199 (325)
T ss_pred EEEEEEehhhcC-cCCccccC---ceEEEeecceEEEEEecCCC-----CC---eEEEEEEEcCCCCCeEEEcCCCC---
Confidence 999999999876 33444554 45799999999999987642 12 33445556666666554432211
Q ss_pred ccccchhhHHhhhhhhhhhHHhccCcccchh-hH-HHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcC
Q 038123 353 GLSVSKDMIEVGGHALKANITTLGPLVLPVS-EQ-VHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLE 430 (508)
Q Consensus 353 g~~ls~d~~~~~g~al~~~i~~~g~~vlp~s-e~-~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lg 430 (508)
....+. . ....++...|..++... .. ...+.++|+++|+++ +|||+|++||+|+++++.+++.||
T Consensus 200 --~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~------~did~~~~h~~~~~~~~~~~~~lg 266 (325)
T PRK12879 200 --TMDRDA-L----SGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK------DDIDWVIPHQANLRIIESLCEKLG 266 (325)
T ss_pred --CCCccc-c----ccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHHHHcC
Confidence 010000 0 00001111111111100 01 134568899999998 999999999999999999999999
Q ss_pred CCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 431 LTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 431 l~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
++++++ ..++++||||+|+|+|+.|++++++|++++||++++++||+|++|+++++||
T Consensus 267 ~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 267 IPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred CCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 999999 4689999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=6.7e-46 Score=383.07 Aligned_cols=320 Identities=18% Similarity=0.188 Sum_probs=249.3
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHHhhcC---CCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHH
Q 038123 113 PCWIYLVDFACYRPPNELKISKKEFIEQARESG---NFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREE 189 (508)
Q Consensus 113 ~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~---~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~e 189 (508)
.++++|.+++.|+|+ ++++++++.+.+.... ..++ +++.+++||++|++.++++ .
T Consensus 3 ~~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~--------------~ 60 (338)
T PRK09258 3 YSNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGT--------------Q 60 (338)
T ss_pred ccceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCC--------------C
Confidence 357999999999999 8999999998754311 1122 3577889999999976543 2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++++|||.||++| ++++..|+++.+|++++|+++++.+||+++ ||+|++.||++|.++|++
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~ 139 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIEL 139 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999886 467889999999999999987799999994 999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCCCCC------Ccc------ccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCC
Q 038123 269 YPGSYALVVSTEVVSNTWYGGN------EVD------MLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDN 336 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~~~~~~~------dr~------~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~ 336 (508)
++.++||||++|..+.. +++. +.. ..+...+|||||+|+||++.+... ..+++.. ....+++
T Consensus 140 g~~~~~Lvv~~e~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~ 213 (338)
T PRK09258 140 GQIDYALVVSGESAREI-VEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAAT 213 (338)
T ss_pred CCCCEEEEEEecccchh-ccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCC
Confidence 99999999999998762 2211 111 112357899999999999865421 1234332 2233444
Q ss_pred ccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcC
Q 038123 337 RSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILA 416 (508)
Q Consensus 337 ~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq 416 (508)
+.++.+... ...+..+.+.+. +..+.. .-..+.++|++.|+++ +|||+|++||
T Consensus 214 ~~~~~~~~~-------~~~~~~~~~~~~----~~~~~~----------~~~~~~~~L~~~g~~~------~did~~i~H~ 266 (338)
T PRK09258 214 EHHELCQGG-------RDGMRTDAVGLL----KEGVEL----------AVDTWEAFLAQLGWAV------EQVDRVICHQ 266 (338)
T ss_pred CcccccccC-------ccceEEcHHHHH----HHHHHH----------HHHHHHHHHHHcCCCH------HHCCEEecCC
Confidence 433321110 011222222221 111111 0124567889999998 9999999999
Q ss_pred CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 417 TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 417 ~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
+|+++++.+++.||++++++ +.++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 267 ~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 267 VGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred CCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 99999999999999999999 5789999999999999999999999999999999999999999999999986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2.1e-45 Score=379.84 Aligned_cols=324 Identities=17% Similarity=0.171 Sum_probs=250.4
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHH
Q 038123 113 PCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAM 192 (508)
Q Consensus 113 ~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 192 (508)
|++|+|.+++.|+|+ ++++++++.+..+. +++ ++.+++||.+|++.++++. +.+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~--------------~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH--------------TSD 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC--------------HHH
Confidence 568999999999999 79999999887652 333 5778999999999876542 689
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEecc--CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc-C
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVNCG--VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA-Y 269 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~~s--~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~-g 269 (508)
|+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ ++|++++.||.+|.++|++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999997643 4678999999999999997 78999999 5999999999999999999 6
Q ss_pred CCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCC
Q 038123 270 PGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAE 349 (508)
Q Consensus 270 ~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~ 349 (508)
..+++|||++|..+. +.+..++..- ....|||||+|+||++.+.. .++ +.+...+|++.++.+..+.++.
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g~ 203 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGGT 203 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCee-eeccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCCc
Confidence 688999999999876 3233333210 01247999999999986542 333 3445567777766655443321
Q ss_pred CCcccccchhhHH-------hh-hhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHH
Q 038123 350 GRQGLSVSKDMIE-------VG-GHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKV 421 (508)
Q Consensus 350 g~~g~~ls~d~~~-------~~-g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~v 421 (508)
.. +++.+... +. .+.++..+.... .+. .-+.+.++|+++|+++ +|||+|++||+|+++
T Consensus 204 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~i~~~L~~~gl~~------~did~~~~h~~~~~~ 269 (339)
T PRK06840 204 KQ---PASPETVENRQHYLDVIDPESMKERLDEVS---IPN--FLKVIREALRKSGYTP------KDIDYLAILHMKRSA 269 (339)
T ss_pred CC---CCcccccccccceEEEcCcHHHHHHhHhhH---HHH--HHHHHHHHHHHcCCCH------HHCCEEEECCcCHHH
Confidence 11 11111000 00 001111111000 000 0134668899999998 999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEe
Q 038123 422 LDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKAL 492 (508)
Q Consensus 422 ld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~ 492 (508)
++.+++.||++++++ .++.+||||+|+|+|++|++++++|++++||++++++||+|++|+++++||.
T Consensus 270 ~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 270 HIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 999999999999997 3689999999999999999999999999999999999999999999999984
No 24
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=5.4e-45 Score=372.43 Aligned_cols=317 Identities=19% Similarity=0.273 Sum_probs=252.3
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
+++|.++++|+|+ ++++++++.+..+. ++ +++.+++||++|+++++++ .+.+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~~--------------~~~~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SD------EWIRTRTGIRERRIADPGE--------------TTSDLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCCC--------------CHHHHH
Confidence 4799999999999 79999999997642 33 3578899999999987754 268999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
.+|++++|+++|+++++||.||++++ +++..|+.+.+|++++|++ ++++++++ ++|++++.||.+|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5666899999999999997 79999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
||||++|.++. +.++.++. ...+|||||+|+||++.+.. .++ +.+...++++.++.+..+..+....
T Consensus 133 vLvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i---~~~~~~~~~~~~~~~~~~~~~~~~~- 199 (320)
T cd00830 133 VLVVGAETLSR-ILDWTDRS---TAVLFGDGAGAVVLEATEED-----PGI---LDSVLGSDGSGADLLTIPAGGSRSP- 199 (320)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEecCCC-----CcE---EEEEEEEcCCCCCeEEeCCCCcCCc-
Confidence 99999999886 33334443 46899999999999987642 333 3445556777777666554321110
Q ss_pred cccchhhHHhhhhhhhhhHHhccCcccchh-hH-HHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCC
Q 038123 354 LSVSKDMIEVGGHALKANITTLGPLVLPVS-EQ-VHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLEL 431 (508)
Q Consensus 354 ~~ls~d~~~~~g~al~~~i~~~g~~vlp~s-e~-~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl 431 (508)
.. ... .-..++.+.++.++... +. ...+.++|+++++++ +|||+|++||+|+++++.+++.||+
T Consensus 200 --~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~------~di~~~~~h~~~~~~~~~~~~~lgl 265 (320)
T cd00830 200 --FE--DAE----GGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP------DDIDWFVPHQANLRIIEAVAKRLGL 265 (320)
T ss_pred --cc--ccc----ccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHHHHhCC
Confidence 00 000 00001111111111100 00 135668899999998 9999999999999999999999999
Q ss_pred CHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeE
Q 038123 432 TEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 432 ~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~ 489 (508)
+++++ ..++++|||++|+|+|++|+++.++|++++||+|++++||+|++|+++++
T Consensus 266 ~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 266 PEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred CHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 99999 57999999999999999999999999999999999999999999999874
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=8.7e-45 Score=371.55 Aligned_cols=315 Identities=21% Similarity=0.319 Sum_probs=253.5
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
.++|.++++|+|+ ++++++++.+..+. ++ .+|.+++||++|++..+++. +.+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADDET--------------SSTMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----ch------HHeecccCceEEEECCCCCC--------------HHHHH
Confidence 4899999999999 79999999987652 22 25788999999998766542 68999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
.+|++++|+++|++|++||.+|+++ ++++..|+.+.++++++|++ ++++++++ +||++++.||++|.++|+++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46677899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
+|||++|..+. +.++.++. ...+|||||+|+||++.+... + +..++..++++.++.++.+.++.....
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~---~~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRG---TCVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcC-cCCcCCCC---eEEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCCC
Confidence 99999999876 33444554 357899999999999876531 2 344555667777776665543211000
Q ss_pred cccchhhHHhhh-hhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCC
Q 038123 354 LSVSKDMIEVGG-HALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELT 432 (508)
Q Consensus 354 ~~ls~d~~~~~g-~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~ 432 (508)
......+.+ +.++..+.. ....+.++++++++++ +||+||++||+++++++.+++.||++
T Consensus 202 ---~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~g~~~------~di~~~~~h~~~~~~~~~~~~~lgi~ 262 (318)
T TIGR00747 202 ---PSPFITMEGNEVFKHAVRK----------MGDVVEETLEANGLDP------EDIDWFVPHQANLRIIEALAKRLELD 262 (318)
T ss_pred ---CCCceEECCHHHHHHHHHH----------HHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHHHHcCCC
Confidence 000000011 111111111 0124567889999998 99999999999999999999999999
Q ss_pred HHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 433 EELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 433 ~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
++++ ..++++||||+|+|+|+.|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 263 ~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 263 MSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 9999 4789999999999999999999999999999999999999999999999986
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.8e-43 Score=361.71 Aligned_cols=314 Identities=20% Similarity=0.298 Sum_probs=250.8
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
.|+|.++++|+|+ ++++++++.+..+. ++ .+|.+++||++|+++.+++. ..+|+
T Consensus 3 ~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 56 (319)
T PRK09352 3 YAKILGTGSYLPE--RVVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPDET--------------TSDLA 56 (319)
T ss_pred ceEEEEEEEECCC--eEEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCCCC--------------HHHHH
Confidence 6899999999999 89999999987642 23 25788999999988765532 68999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
.+|++++|+++|+++++||.+|++++ ++...|+.+..|+.++|++ ++++++++ ++|++++.||.+|.++|++|..++
T Consensus 57 ~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~~ 134 (319)
T PRK09352 57 TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYKN 134 (319)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5666899999999999995 78999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
|||+++|.++. +....++. ...+|||||+|+||++++.. ++ ..++..++++.++.+..+.++...
T Consensus 135 vLvv~~e~~s~-~~~~~~~~---~~~~~gDGaaA~ll~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (319)
T PRK09352 135 VLVIGAEKLSR-IVDWTDRS---TCVLFGDGAGAVVLGASEEP------GI---LSTHLGSDGSYGDLLYLPGGGSRG-- 199 (319)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEEcCCC------Ce---EEEEEEEcCCCCCeEEeCCCCCCC--
Confidence 99999999886 33444544 35799999999999987642 22 334445566666655544332111
Q ss_pred cccchhhHHhhhhh-hhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCC
Q 038123 354 LSVSKDMIEVGGHA-LKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELT 432 (508)
Q Consensus 354 ~~ls~d~~~~~g~a-l~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~ 432 (508)
+.+.......++. ++..+.. ..+.+.++|+++|+++ +|||||++||+|+++++.+++.||+|
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~l~~~g~~~------~di~~~~~h~~~~~~~~~~~~~lg~~ 262 (319)
T PRK09352 200 -PASPGYLRMEGREVFKFAVRE----------LAKVAREALEAAGLTP------EDIDWLVPHQANLRIIDATAKKLGLP 262 (319)
T ss_pred -CCCCCceEECCHHHHHHHHHH----------HHHHHHHHHHHcCCCH------HHCCEEEECCCCHHHHHHHHHHhCCC
Confidence 0100011111111 1111110 0134567889999998 99999999999999999999999999
Q ss_pred HHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEE
Q 038123 433 EELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 433 ~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
.+++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 263 ~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 263 MEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred HHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 9998 5789999999999999999999999999999999999999999999999997
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.7e-43 Score=371.22 Aligned_cols=345 Identities=18% Similarity=0.178 Sum_probs=247.6
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
+|+|.++|+|+|+ ++++|+++.+.++......+ ...++|++++||.+|++..++.. .+. +.+.+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~~-------~~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RPT-------HSNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CCC-------CCHHHHH
Confidence 5899999999999 79999999988764321111 12258999999999999754321 001 1368999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
.+|++++|+++|++|+|||.||++| ++++..|+.+..|++++|++ ++++++++ ++|+|++.||.+|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999986 56678899999999999998 68899998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCC------------cc--c----cccccccccceEEEEEeeCCCCccccccceeeEEeeeeccC
Q 038123 274 ALVVSTEVVSNTWYGGNE------------VD--M----LLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMD 335 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~d------------r~--~----lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd 335 (508)
||||++|.+|..+ ++.+ +. . -..+.+|||||+|+||++.+... +..+ ++......++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998633 2111 10 0 00135799999999999866421 1111 1111122233
Q ss_pred CccccceeeccCC-C--C-Ccccc-cchhhHHhhhhhhhhhHHhccCcccchh-hH-HHHHHHHHHhcCCCCCccccccc
Q 038123 336 NRSFKCMHLKEDA-E--G-RQGLS-VSKDMIEVGGHALKANITTLGPLVLPVS-EQ-VHFFTNLLLKKKTKPYIPDYKQA 408 (508)
Q Consensus 336 ~~~~~~~~~~~d~-~--g-~~g~~-ls~d~~~~~g~al~~~i~~~g~~vlp~s-e~-~~~~~~~l~~~gl~~y~pd~~~d 408 (508)
...+..+...... . + ..++. .+.+.+...+. ..+.+.++.+.... +. ...+.++|++.|+++ +|
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~------~D 291 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASA---LSLKQDVRLLNENIVVYTIKPLLELVDKRNLDP------DD 291 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccC---chHHhHHHHHHHHhHHHHHHHHHHHHHHcCCCh------hh
Confidence 2222222211100 0 0 00000 11111111110 11122222221111 11 235668899999998 99
Q ss_pred ccEEEEcCCCHHHHHHHHHHc-----CCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechH-H
Q 038123 409 FEHICILATSKKVLDEIQKNL-----ELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSG-V 482 (508)
Q Consensus 409 id~f~~Hq~~~~vld~v~~~L-----gl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG-~ 482 (508)
||+|++||+|.++++.+.++| |+|++++ +.++++||||+|||+|++|++++++|++++||+|++++.|+| +
T Consensus 292 Id~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s~~~ 368 (378)
T PRK06816 292 IDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPESGRF 368 (378)
T ss_pred CCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecccch
Confidence 999999999999999999987 9999998 689999999999999999999999999999999999988766 9
Q ss_pred hhhheeEEEe
Q 038123 483 KCNSVVWKAL 492 (508)
Q Consensus 483 ~~~sav~r~~ 492 (508)
.++.+++.|.
T Consensus 369 ~~~~~~~~~~ 378 (378)
T PRK06816 369 STAFMLLTVV 378 (378)
T ss_pred hheeEEEEEC
Confidence 9999999874
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-42 Score=360.73 Aligned_cols=311 Identities=19% Similarity=0.233 Sum_probs=240.5
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
.++|.+++.|+|+ ++++++++.+..+. +++ +|.+++||.+|+++++++. +.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~~--------------~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDED--------------TATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCcC--------------HHHHH
Confidence 5899999999999 89999999987652 443 6889999999999876643 68999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
.+|++++|+++|++|+|||.||++| ++++..|+.+.+|++++|+++++.++|++ +||++++.||.+|.+++++|+.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 56778899999999999998678999998 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
||||++|.... .+.++. ...|||||+|+||++.+. ..++.+... ..+|+ .+.+..+.......+
T Consensus 135 aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~--~d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDT--PDFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeecccc--ccccc--hhhcCCCCCcCCCcC
Confidence 99999998422 223332 246899999999997442 233332211 11222 121111000000001
Q ss_pred cccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCH
Q 038123 354 LSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTE 433 (508)
Q Consensus 354 ~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~ 433 (508)
..++++ + . .++. ....+.++|++.|+++ +|||+|++||+|+++++.+++.||+++
T Consensus 199 ~~~~~~-~----~----~~~~----------~~~~i~~~L~~~gl~~------~dId~~v~Hq~n~~~~~~~~~~Lgl~~ 253 (347)
T PRK04262 199 GRFTGE-P----A----YFKH----------IISAAKGLMEKLGLKP------SDYDYAVFHQPNGKFPLRVAKMLGFTK 253 (347)
T ss_pred ceecch-H----H----HHHH----------HHHHHHHHHHHhCcCH------HHhceeecCCCchHHHHHHHHHcCCCH
Confidence 111110 0 0 1110 0123558899999998 999999999999999999999999999
Q ss_pred HHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEeccCC
Q 038123 434 ELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVE 496 (508)
Q Consensus 434 e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~~~ 496 (508)
+++..+. ++++||||+|||+|++|+.+.+ ++++||+|++++||+|+++.+.+|++.....
T Consensus 254 ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 254 EQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred HHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 9996433 6899999999999999999987 4899999999999999999999999976644
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-41 Score=356.43 Aligned_cols=345 Identities=17% Similarity=0.175 Sum_probs=243.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhc-CCCChhh---H----------HHHHHHHHHhCCcceeecCCCc----c
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARES-GNFNDAS---L----------EFKQRIIKNSGLGDETYLPRAV----F 175 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~-~~~~~~~---~----------~f~~~i~~~sGI~~r~~~~~~~----~ 175 (508)
++|+|+++|+|+|+ ++++|+++.+.++.. .+|+++. + ...++|.+++||.+|++..+.. .
T Consensus 1 ~~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 36899999999999 799999999875321 1111100 0 0125788999999999975321 0
Q ss_pred CCCC--CCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccc
Q 038123 176 CPGY--RPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGC 252 (508)
Q Consensus 176 ~~~~--~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gC 252 (508)
..++ ..........+.+|+..|++++|+++|++|+|||.||++|+ ++...|+.+.+|+++||++ ..+++++ ++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 0011 00111122346789999999999999999999999998874 5778999999999999996 5789999 699
Q ss_pred hHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeee
Q 038123 253 SAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHK 332 (508)
Q Consensus 253 s~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~ 332 (508)
++++.||.+|.++|++|..++||||++|.+|. +..+.++. +..+|||||+|+||++.+....+.++++.+.. .
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTR---L 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEE---e
Confidence 99999999999999999999999999999886 33445665 46899999999999986643222345554332 2
Q ss_pred ccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchh-h-HHHHHHHHHHhcCCCCCccccccccc
Q 038123 333 GMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVS-E-QVHFFTNLLLKKKTKPYIPDYKQAFE 410 (508)
Q Consensus 333 ~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~s-e-~~~~~~~~l~~~gl~~y~pd~~~did 410 (508)
.++. .+.+..+. +. +.....+-+.. ...++.+.|+.++... + ....+.++|+++|+++ +|||
T Consensus 229 ~~~~--~~~~~~~~-G~---~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~------~dId 292 (372)
T PRK07515 229 FTQF--SNNIRNNF-GF---LNRADPEGIGA----RDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP------ADVK 292 (372)
T ss_pred eccc--ccceecCC-CC---CCCCCcccccc----ccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH------HHCC
Confidence 2211 12111110 00 00000000000 0001111222221100 0 1135668899999998 9999
Q ss_pred EEEEcCCCHHHHHHHHHH-cCC--CHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhhe
Q 038123 411 HICILATSKKVLDEIQKN-LEL--TEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSV 487 (508)
Q Consensus 411 ~f~~Hq~~~~vld~v~~~-Lgl--~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sa 487 (508)
+|++||+|.++++.+.+. ||+ ++++. +.++++||||+|+|+|+.|+++. +++++||+|++++||+|++|+++
T Consensus 293 ~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~~~~ 367 (372)
T PRK07515 293 RFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSIGSV 367 (372)
T ss_pred EEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHHHHH
Confidence 999999999999999988 564 45554 68999999999999999999874 57899999999999999999999
Q ss_pred eEEE
Q 038123 488 VWKA 491 (508)
Q Consensus 488 v~r~ 491 (508)
++|.
T Consensus 368 ll~~ 371 (372)
T PRK07515 368 IVRK 371 (372)
T ss_pred Hhcc
Confidence 9874
No 30
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=6.4e-42 Score=355.22 Aligned_cols=313 Identities=17% Similarity=0.195 Sum_probs=239.5
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHHH
Q 038123 116 IYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLF 195 (508)
Q Consensus 116 v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 195 (508)
++|.++|+|+|+ ++++|+++.+..+. +++ +|.+++||++|+++++++. +.+|+.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~~--------------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDED--------------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCCC--------------HHHHHH
Confidence 689999999999 89999999887642 443 5788999999999877653 689999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeE
Q 038123 196 GAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYA 274 (508)
Q Consensus 196 ~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~a 274 (508)
+|++++|+++|++|+|||.||++| ++++..|+.+..+++++|+++++.++|++ .||+|++.||.+|..++++|..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999886 46677899999999999997689999999 5999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCc-cccceeeccCCCCCcc
Q 038123 275 LVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNR-SFKCMHLKEDAEGRQG 353 (508)
Q Consensus 275 LVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~-~~~~~~~~~d~~g~~g 353 (508)
|||++|..+.. +.++. ...|||||+|+||++.+.. .++.+.. ...+|+. .++. ........+
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~---~~~~~~~~~ 197 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRR---EGEPYPRHG 197 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceeccccccccc---CCCcCCCcC
Confidence 99999997642 23332 3578999999999965421 1221111 1112221 1110 000000000
Q ss_pred cccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCH
Q 038123 354 LSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTE 433 (508)
Q Consensus 354 ~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~ 433 (508)
..... ..+.++.. ...+.++|+++++++ +|||+|++||+|+++++.+.+.||+++
T Consensus 198 ~~~~~-----~~~~~~~~--------------~~~~~~~L~~~gl~~------~did~~i~Hq~~~~~~~~~~~~lgl~~ 252 (345)
T TIGR00748 198 GRFTG-----EPAYFHHV--------------VTAAKGLMEKLGLTP------EDFDYAVFHQPNGKFYLVAARMLGFPK 252 (345)
T ss_pred CeecC-----hHHHHHHH--------------HHHHHHHHHHcCCCH------HHcCEEEeCCCChHHHHHHHHHcCCCH
Confidence 00000 00111111 123457899999998 999999999999999999999999999
Q ss_pred HHHHHhhhh--hcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEeccCCCCCCCCCC
Q 038123 434 ELMEASRKT--LERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKPERSPWL 504 (508)
Q Consensus 434 e~~~~s~~t--l~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~~~~~~~~~w~ 504 (508)
+++. .+ .++||||+|+|+|+.|+++++ ++++||+|++++||+|++|++++|+|...... ..||.
T Consensus 253 ek~~---~~~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~--~~~~~ 318 (345)
T TIGR00748 253 EQVK---PGLLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE--KRDLA 318 (345)
T ss_pred HHee---ccccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH--Hhhhh
Confidence 9984 43 489999999999999999886 68999999999999999999999999765542 23564
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=6.4e-40 Score=335.58 Aligned_cols=317 Identities=21% Similarity=0.246 Sum_probs=238.8
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
.|+|.++++|+|+ ++++++++.+..+. . ++..++||++|++..+++ .+.+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~--------------~~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDE--------------DVPTMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCC--------------CHHHHH
Confidence 4789999999999 89999999987652 1 367789999999976533 268999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
.+|++++|+++|++|+|||.||++++ +....|+.+.+|++++|++ ++++++++ ++|++++.||.+|.++|++|..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5556889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
||||++|.++.... ...+ ..++|||||+|+||++.+.. ..+++. .++..+++..+++.....+. + ..
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~~~~~~~~-~-~~ 197 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFSPYPVMDG-G-YP 197 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccCccceecc-C-CC
Confidence 99999999886332 1122 46899999999999987642 123443 34444555443200000000 0 00
Q ss_pred cccchhhHHhhhhhhhhhHHhcc--Ccccchh-hH-HHHHHHHHHhcCCCCCcccccccccEEEEcCCCH-HHHHHHHHH
Q 038123 354 LSVSKDMIEVGGHALKANITTLG--PLVLPVS-EQ-VHFFTNLLLKKKTKPYIPDYKQAFEHICILATSK-KVLDEIQKN 428 (508)
Q Consensus 354 ~~ls~d~~~~~g~al~~~i~~~g--~~vlp~s-e~-~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~-~vld~v~~~ 428 (508)
.... ... ...+...+ ..+.... +. ...+.++|++.+++ +|||+|++||+|+ .+++.+++.
T Consensus 198 ~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~i~~~~~h~~~~~~~~~~~~~~ 262 (324)
T cd00827 198 KPCK----LAY----AIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-------EDIDYFVPHQPNGKKILEAVAKK 262 (324)
T ss_pred cchh----hhh----hcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-------cccceeeccCchHHHHHHHHHHH
Confidence 0000 000 00000000 0111000 00 12344677777665 6899999999999 999999999
Q ss_pred cCCCHHHHHHhhh-hhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeE
Q 038123 429 LELTEELMEASRK-TLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 429 Lgl~~e~~~~s~~-tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~ 489 (508)
++++++++..++. ++++||||+|+|+|+.|+++++++++++||+|++++||+|++|+++++
T Consensus 263 l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 263 LGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred ccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999976554 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=4.5e-36 Score=315.14 Aligned_cols=304 Identities=16% Similarity=0.174 Sum_probs=227.5
Q ss_pred eEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHHH
Q 038123 116 IYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLF 195 (508)
Q Consensus 116 v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 195 (508)
|+|.+++.|+|+ ++++++++.+..+ .+++ |+...+|++++++.++++ ++.+|+.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g----~~~~------~~~~g~G~~~~~~~~~~e--------------d~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARG----VDPE------KFHIGIGQKKMAVPPIDE--------------DIVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhC----CCHH------HHHhhcCceEEeeCCCCC--------------CHHHHHH
Confidence 579999999999 8999999998754 2443 678899999999877654 2689999
Q ss_pred HHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeE
Q 038123 196 GAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYA 274 (508)
Q Consensus 196 ~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~a 274 (508)
+|++++|+++ +|++||.||++| ++++..|+.+..|++.||+++++.++|+. ++|+|++.||.+|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 66777899999999999998789999999 5999999999999999999999999
Q ss_pred EEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEE-eeeeccCCccccceeeccCCCCCcc
Q 038123 275 LVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLV-RTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 275 LVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
|||++|+... .. .+. ...+|||||+|+||++.+. +..+. .+...+++. ++. +.+.+.
T Consensus 132 LVv~~D~a~~--~~-~~~----~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~----- 189 (379)
T TIGR01835 132 LVIASDIAKY--GL-ESP----GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYS----- 189 (379)
T ss_pred EEEEeehhhc--cc-CCC----CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCC-----
Confidence 9999998532 11 111 2468999999999997542 11111 111112221 111 112110
Q ss_pred cccchhhHHhhhhhh-hhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHH----HHHHHHH
Q 038123 354 LSVSKDMIEVGGHAL-KANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKV----LDEIQKN 428 (508)
Q Consensus 354 ~~ls~d~~~~~g~al-~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~v----ld~v~~~ 428 (508)
+.+.+.++.. +.++..+ -..+.+++++.++++ +|||+||+||++.++ ++.+.+.
T Consensus 190 -----~~~~v~g~~s~~~y~~~~----------~~~~~~~l~~~g~~~------~did~~i~H~p~~~~~~k~~~~~l~~ 248 (379)
T TIGR01835 190 -----TTALVDGQYSNEQYLNAF----------ENAWNDYAKRTGLSL------ADFAAFCFHVPFTKMGLKALRHILKK 248 (379)
T ss_pred -----CceeECcHHHHHHHHHHH----------HHHHHHHHHHhCCCH------HHcCEEEECCCCCcHHHHHHHHHHhh
Confidence 1122232221 1222211 124567888999998 999999999997776 3446667
Q ss_pred cCCC-HHHH----HHhhhhhcccCccccchHHHHHHHHHHhC-CCCCCCEEEEEeechHHhhhheeEEE
Q 038123 429 LELT-EELM----EASRKTLERFGNTSSSSVWYELAYLEANA-GVKRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 429 Lgl~-~e~~----~~s~~tl~r~GNtsSaSi~~~La~~~~~g-ri~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
++++ .+++ ++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+.
T Consensus 249 ~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~ 317 (379)
T TIGR01835 249 NYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTL 317 (379)
T ss_pred cccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEE
Confidence 7777 3333 45667899999999999999999999886 89999999999999997655555544
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=6.8e-34 Score=302.49 Aligned_cols=309 Identities=17% Similarity=0.239 Sum_probs=223.1
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeec--CCCccCCCCCCCccchHHH
Q 038123 112 TPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYL--PRAVFCPGYRPNLKDGREE 189 (508)
Q Consensus 112 ~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~--~~~~~~~~~~~~~~~~~~e 189 (508)
+|++|.|.++|.|+|+ ++|+++++.+..+. +++ |+ ++||++|++. ++++ +
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E--------------d 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE--------------D 52 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC--------------C
Confidence 4788999999999999 89999999987652 555 33 6899999974 3333 4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHH---HHcCCCCCceEEEecCccchHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVI---NHYKLRHNINSFNLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~---~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~l 265 (508)
+.+|+++|++++|+++|++|++||.||++| |+++..|+++..|+ +++|.+ ++.+||++ .+|+||+.||++|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 789999999999999999999999999997 67788999999886 678876 89999999 5999999999999999
Q ss_pred HHcCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCc-cccce
Q 038123 266 LNAYP--GSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNR-SFKCM 342 (508)
Q Consensus 266 L~~g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~-~~~~~ 342 (508)
++++. .++||||++|+.+.... ..+ ..+||||+|+||+..+. ..+.. ...+++.. .|+ .
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~~--~~e------~t~GdGA~A~lv~~~~~------~~l~~---~~~g~~~~~~~D-f 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAEG--PAR------PTGGAGAVAMLVGPNAP------IVFES---KYRGSHMAHVYD-F 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccCC--CCC------CCCCcceEEEEEccCCC------ceeec---ccccccCcccch-h
Confidence 99986 59999999999664211 122 35699999999996442 11111 11111111 122 2
Q ss_pred eeccCCCCCcccccchhhHHhhhhh-hhhhHHhccCcccchhhHHHHHHHHHHhc------CCCCCcccccccccEEEEc
Q 038123 343 HLKEDAEGRQGLSVSKDMIEVGGHA-LKANITTLGPLVLPVSEQVHFFTNLLLKK------KTKPYIPDYKQAFEHICIL 415 (508)
Q Consensus 343 ~~~~d~~g~~g~~ls~d~~~~~g~a-l~~~i~~~g~~vlp~se~~~~~~~~l~~~------gl~~y~pd~~~did~f~~H 415 (508)
+.+... .+.|.++|+. ++.+++.+. ..+.+++++. |++. +|||+||+|
T Consensus 193 ~rP~~~---------~~~~~vdG~~s~~~yl~~~~----------~~~~~~~~k~~~~~~~g~~~------~d~d~~vfH 247 (459)
T PLN02577 193 YKPDLA---------SEYPVVDGKLSQTCYLMALD----------SCYKRFCEKYEKLEGKQFSI------SDADYFVFH 247 (459)
T ss_pred cccCCC---------CCceEEcchHHHHHHHHHHH----------HHHHHHHHHhhcccccCCCH------HHcCEEEec
Confidence 222211 1123334332 223333211 1223444444 6666 899999999
Q ss_pred CCCHHHHHHHHHHcCCC----------------------------------------------HHHHHHhhhhhcccCcc
Q 038123 416 ATSKKVLDEIQKNLELT----------------------------------------------EELMEASRKTLERFGNT 449 (508)
Q Consensus 416 q~~~~vld~v~~~Lgl~----------------------------------------------~e~~~~s~~tl~r~GNt 449 (508)
|+..++...-.+.|.+. .++++||...-.+.||+
T Consensus 248 qP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~ 327 (459)
T PLN02577 248 APYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNM 327 (459)
T ss_pred CCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcc
Confidence 99887776655444311 25677777778999999
Q ss_pred ccchHHHHHHHHHHhCC-CCCCCEEEEEeechHHhhhheeEEEec
Q 038123 450 SSSSVWYELAYLEANAG-VKRGDRIWQTAFGSGVKCNSVVWKALR 493 (508)
Q Consensus 450 sSaSi~~~La~~~~~gr-i~~Gd~vlliafGsG~~~~sav~r~~~ 493 (508)
.++|+++.|+.+++... ..+|+||.++++|||........+...
T Consensus 328 YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 328 YTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred cchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 99999999999997653 459999999999999766655555443
No 34
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1.7e-31 Score=283.77 Aligned_cols=313 Identities=17% Similarity=0.239 Sum_probs=214.5
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceee--cCCCccCCCCCCCccchHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETY--LPRAVFCPGYRPNLKDGREEAAM 192 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~--~~~~~~~~~~~~~~~~~~~ea~~ 192 (508)
+|+|.+++.|+|+ ++++++++.++.+. +++ |+ ++||++|+. .++++ ++.+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~E--------------d~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRE--------------DINS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCC--------------CHHH
Confidence 5899999999999 89999999887652 443 34 599999995 44443 3789
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHc---CCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHY---KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~l---gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
|+..|++++|++++++|++||.||++| |+++..|+.+..|++.| |.+ ++.+||+. .+|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999997 68889999999999955 454 89999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeecc
Q 038123 269 YP--GSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKE 346 (508)
Q Consensus 269 g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~ 346 (508)
+. .++||||++|+.- | .+.+ ...++||||+|+||++.+.- -++. ++..++......+|+ |.
T Consensus 131 ~~~~~~~aLVV~sDia~---y--~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~r----P~ 193 (454)
T TIGR01833 131 SSWDGRYALVVAGDIAV---Y--AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYK----PD 193 (454)
T ss_pred CCcCCCeEEEEEecccc---c--cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEeecccccC----CC
Confidence 85 6999999999932 1 2222 23578999999999976641 0111 011122222222332 21
Q ss_pred CCCCCcccccchhhHHhhhhh-hhhhHHhccCcccchhhHHHHHHHHHHh----cCCCCCcccccccccEEEEcCCCHHH
Q 038123 347 DAEGRQGLSVSKDMIEVGGHA-LKANITTLGPLVLPVSEQVHFFTNLLLK----KKTKPYIPDYKQAFEHICILATSKKV 421 (508)
Q Consensus 347 d~~g~~g~~ls~d~~~~~g~a-l~~~i~~~g~~vlp~se~~~~~~~~l~~----~gl~~y~pd~~~did~f~~Hq~~~~v 421 (508)
. ..+.|.++|+. +..++..+....-.+.++ +...+.+ .+..+ +|||++|+|++..++
T Consensus 194 ~---------~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~---~~~a~~~~~~~~~~~~------~dfd~~~fH~P~~km 255 (454)
T TIGR01833 194 L---------ASEYPVVDGKLSIQCYLSALDRCYKSYCKK---IEKQWGKSGGDRKFTL------NDFDYMVFHSPYCKL 255 (454)
T ss_pred C---------CCcccccCCccCHHHHHHHHHHHHHHHHHH---HHHhhhhhccccCCCH------hHcCEEeccCCcccH
Confidence 1 01122222220 111222111111111111 1112222 24554 899999999997766
Q ss_pred HHHH-HHHc---------------------------------------------CCCHHHHHHhhhhhcccCccccchHH
Q 038123 422 LDEI-QKNL---------------------------------------------ELTEELMEASRKTLERFGNTSSSSVW 455 (508)
Q Consensus 422 ld~v-~~~L---------------------------------------------gl~~e~~~~s~~tl~r~GNtsSaSi~ 455 (508)
.... .+.+ +...++++||...-.+.||+.++|++
T Consensus 256 ~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSly 335 (454)
T TIGR01833 256 VQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLY 335 (454)
T ss_pred HHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHH
Confidence 6543 2221 11236777776677799999999999
Q ss_pred HHHHHHHHhCC--CCCCCEEEEEeechHHhhhheeEEEe
Q 038123 456 YELAYLEANAG--VKRGDRIWQTAFGSGVKCNSVVWKAL 492 (508)
Q Consensus 456 ~~La~~~~~gr--i~~Gd~vlliafGsG~~~~sav~r~~ 492 (508)
+.|+.+++..+ ...|+||.|++||||........+..
T Consensus 336 l~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~ 374 (454)
T TIGR01833 336 GCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVS 374 (454)
T ss_pred HHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEe
Confidence 99999998643 56799999999999966555555444
No 35
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=2.5e-31 Score=271.86 Aligned_cols=310 Identities=22% Similarity=0.260 Sum_probs=239.0
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVL 194 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 194 (508)
.+.|++++.|.|. ++|..+++.+..+. +++ ++..-+|++++.+.+.+ |++..|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~--------------ED~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWD--------------EDAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCc--------------hhHHHHH
Confidence 5889999999999 89999999986552 443 68888999999887765 4689999
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSY 273 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~ 273 (508)
++|++++|++.++||++|+.|+++| |..+..-+.+..|++.+|+.+++.++|+.+ +|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999997 566778889999999999999999999995 99999999999999999999999
Q ss_pred EEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcc
Q 038123 274 ALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQG 353 (508)
Q Consensus 274 aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g 353 (508)
+|||++|+.- +...+.. -...|+||+|+|++..+.. -..+.. +...+++. ++ .+++++.
T Consensus 135 ~LvI~sD~a~---~~~~~~~----E~t~GAGavA~lIg~n~~~----~a~~~~---~~syt~d~-~D-FwRp~~~----- 193 (377)
T COG3425 135 GLVIGADTAQ---YAPGDAL----EYTAGAGAVAFLIGKNPPI----VAEFEG---TGSYTTDT-PD-FWRPDGQ----- 193 (377)
T ss_pred eEEEeehhhc---cCCCccc----CccCCCceEEEEEccCCCe----EEEecC---ceEEecCC-Cc-ccccCCC-----
Confidence 9999999842 2222222 3578999999999986431 111111 11112211 11 2222221
Q ss_pred cccchhhHHhhhhh-hhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCC
Q 038123 354 LSVSKDMIEVGGHA-LKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELT 432 (508)
Q Consensus 354 ~~ls~d~~~~~g~a-l~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~ 432 (508)
..|.++++. ...+++.+ + ..+..+++|.++++ +|||++|+|+++.++-...++.++.+
T Consensus 194 -----~yp~~dg~~s~~~Y~~~~--------~--~a~~~~~~k~gls~------~dfdy~vfH~P~~k~~~ka~k~l~~~ 252 (377)
T COG3425 194 -----PYPYVDGRFSEPAYFKHV--------E--NAAKGYMEKTGLSP------DDFDYIVFHQPNGKFPKKAAKSLGFK 252 (377)
T ss_pred -----cccccCceecHHHHHHHH--------H--HHHHHHHHHhCCCh------hhhCeEEecCCCCchHHHHHHHhCcc
Confidence 112222211 11122110 1 13457788889998 99999999999999999999999999
Q ss_pred HHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEecc
Q 038123 433 EELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRN 494 (508)
Q Consensus 433 ~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~ 494 (508)
.+++.++.....+.||+.|+|+++.|+.+++..+ .+||||++.+||+|......-.+....
T Consensus 253 ~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~ 313 (377)
T COG3425 253 EEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDG 313 (377)
T ss_pred HhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEeccc
Confidence 9999998888889999999999999999999776 799999999999996544444444433
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.97 E-value=1.6e-30 Score=252.25 Aligned_cols=203 Identities=28% Similarity=0.351 Sum_probs=161.5
Q ss_pred hcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCCh--hhHHHHHHHHHHhCCcceeecCCCcc-C------CCCC
Q 038123 110 ETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFND--ASLEFKQRIIKNSGLGDETYLPRAVF-C------PGYR 180 (508)
Q Consensus 110 ~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~--~~~~f~~~i~~~sGI~~r~~~~~~~~-~------~~~~ 180 (508)
.+.+.+.+|+++|+..|+ ++++++++.+.+......+. +..+++++|++++||++|+..-+.++ . ....
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 345678999999999999 89999999987533222232 34567899999999999998643211 0 1112
Q ss_pred C----CccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHH
Q 038123 181 P----NLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGI 256 (508)
Q Consensus 181 ~----~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl 256 (508)
+ .++.+.+++.+|+.+|++++|+++|++++|||+||++|++....|++..+|+++|||++++..+.|++|||+||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 2 345688999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCC--CCccccccccccccceEEEEEeeCC
Q 038123 257 IAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGG--NEVDMLLPNCFFRMGAAAVLLSSCR 314 (508)
Q Consensus 257 ~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~--~dr~~lv~~~lfgDGAaAvLLs~~~ 314 (508)
.+|.+|+++.+++|..+||||++|.+|.+|..+ .+++.++.++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 999999999999999999999999999877643 3467888999999999999999764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=4.8e-29 Score=245.99 Aligned_cols=238 Identities=19% Similarity=0.182 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.++++++ .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 6789999999999999999999999999965 5566899999999999997 79999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCC
Q 038123 269 YPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDA 348 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~ 348 (508)
+..++|||+++|. ++|||||+|+||++++....+....+..+.......++..+
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~--------- 138 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM--------- 138 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC---------
Confidence 9999999999998 58999999999998653211111001111211111111100
Q ss_pred CCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHH
Q 038123 349 EGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKN 428 (508)
Q Consensus 349 ~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~ 428 (508)
..... .+.+. +.+.++++++++.+ +|||+|++|+.+..+++.+++.
T Consensus 139 ----~~~~~-------~~~~~-----------------~~i~~~l~~ag~~~------~did~~~~h~~~~~~~~~~~~~ 184 (254)
T cd00327 139 ----VPAVS-------GEGLA-----------------RAARKALEGAGLTP------SDIDYVEAHGTGTPIGDAVELA 184 (254)
T ss_pred ----CCCCC-------hHHHH-----------------HHHHHHHHHcCCCH------HHCCEEEccCCcCccccHHHHH
Confidence 00000 01111 23457788999998 9999999999999999999999
Q ss_pred cCCCHHHHH--HhhhhhcccCccccchHHHHHHHHHHhCCCC-------CCCEEEEEeechHHhhhheeE
Q 038123 429 LELTEELME--ASRKTLERFGNTSSSSVWYELAYLEANAGVK-------RGDRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 429 Lgl~~e~~~--~s~~tl~r~GNtsSaSi~~~La~~~~~gri~-------~Gd~vlliafGsG~~~~sav~ 489 (508)
++++.++.. +...+..+|||++++|.++.|+.+.+..+.+ +||++++++||.|++++++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 185 LGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 999887763 3357889999999999999999998876666 899999999999999998874
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.94 E-value=1.8e-26 Score=236.53 Aligned_cols=252 Identities=17% Similarity=0.118 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCccEEEEeccC-CCC---------------------CCchHHHHHHHcCCCCCce
Q 038123 190 AAMVLFGAIDDLLAATKIR----PKDIRVLVVNCGV-LNT---------------------TPSLSAMVINHYKLRHNIN 243 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~----p~dId~LI~~~s~-~~~---------------------~Ps~a~~v~~~lgl~~~~~ 243 (508)
..+|+..|++++|+++|++ +++||.||++++. ... .|+.+.+|++.+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 5789999999999999999 9999999988653 222 688899999999994 78
Q ss_pred EEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCC----------CC--Cc--cccccccccccceEEEE
Q 038123 244 SFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYG----------GN--EV--DMLLPNCFFRMGAAAVL 309 (508)
Q Consensus 244 ~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~----------~~--dr--~~lv~~~lfgDGAaAvL 309 (508)
+++++ .+|++++.||++|.++|++++.+++||+++|..+..+.. +. .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 699999999999999999999999999999987642211 00 00 11225789999999999
Q ss_pred EeeCCCCccc---cccceeeEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHH
Q 038123 310 LSSCRLDKWR---SKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQV 386 (508)
Q Consensus 310 Ls~~~~~~~~---~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~ 386 (508)
|++.+....+ ...++.+ +....++.... . .. + ..+.+ .
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~----------~----~~---~--~~~~~-----------------~ 208 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMG----------A----FA---P--SAEGL-----------------A 208 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCC----------C----CC---c--CHHHH-----------------H
Confidence 9986542110 1112221 11112211100 0 00 0 00101 1
Q ss_pred HHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHHHH--HHhhhhhcccCccccchHHHHHHHHHHh
Q 038123 387 HFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELM--EASRKTLERFGNTSSSSVWYELAYLEAN 464 (508)
Q Consensus 387 ~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~--~~s~~tl~r~GNtsSaSi~~~La~~~~~ 464 (508)
+.+.++|+++++++ +|||++++|+.|..+.+.+++.++++.++. .+...+..+|||++++|.++.|+.+...
T Consensus 209 ~~i~~al~~agl~~------~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~ 282 (332)
T cd00825 209 RAAKEALAVAGLTV------WDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLM 282 (332)
T ss_pred HHHHHHHHHcCCCH------hHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHH
Confidence 23457888999998 999999999999999999999888876642 1225788999999999999999999886
Q ss_pred CCCC-------------------------CCCEEEEEeechHHhhhheeE
Q 038123 465 AGVK-------------------------RGDRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 465 gri~-------------------------~Gd~vlliafGsG~~~~sav~ 489 (508)
++.+ +|+++++++||.|.+++++|+
T Consensus 283 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 283 LEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 6655 899999999999999998874
No 39
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.83 E-value=4.2e-21 Score=161.22 Aligned_cols=90 Identities=31% Similarity=0.463 Sum_probs=79.4
Q ss_pred HHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCE
Q 038123 393 LLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDR 472 (508)
Q Consensus 393 l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~ 472 (508)
|+++|+++ +|||+|++||.|.++++.+.+.+|++++++ +.++++||||+|+|+|++|+++.++|++++||+
T Consensus 1 L~~~g~~~------~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~ 71 (90)
T PF08541_consen 1 LERAGLSP------DDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDR 71 (90)
T ss_dssp HHHTT--G------GGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEE
T ss_pred CccccCCH------HHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCE
Confidence 56889998 999999999999999999999999999998 689999999999999999999999999999999
Q ss_pred EEEEeechHHhhhheeEEE
Q 038123 473 IWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 473 vlliafGsG~~~~sav~r~ 491 (508)
|+++++|+|++|++++|||
T Consensus 72 vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 72 VLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEETTTEEEEEEEE-
T ss_pred EEEEEEEhhheeEEEEEEC
Confidence 9999999999999999997
No 40
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.81 E-value=1.3e-19 Score=166.62 Aligned_cols=118 Identities=22% Similarity=0.380 Sum_probs=96.3
Q ss_pred cccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCC
Q 038123 352 QGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLEL 431 (508)
Q Consensus 352 ~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl 431 (508)
+.+.|++++|...++.++. ++.++|++.+++. .++.+|++|+||++|+|.+++.|+|
T Consensus 26 f~~~Ls~~vP~~i~~~i~~-----------------~~~~~L~~~g~~~------~~~~~wavHPGG~~ILd~v~~~L~L 82 (151)
T PF02797_consen 26 FHFILSKEVPDLISDNIPP-----------------FVEDLLARHGLSD------WDILFWAVHPGGRKILDAVEEALGL 82 (151)
T ss_dssp EEEEE-TTHHHHHHHHHHH-----------------HHHHHHHGGTCCS------GGGSEEEEE-SSHHHHHHHHHHHTS
T ss_pred EEEEEhhHhHHHHHHHHHH-----------------HHHHHHhhhcccc------cccceeeecCChHHHHHHHHHHcCC
Confidence 5678999999887654432 3457888888875 5677999999999999999999999
Q ss_pred CHHHHHHhhhhhcccCccccchHHHHHHHHHH----hCCCCC---CCEEEEEeechHHhhhheeEEEe
Q 038123 432 TEELMEASRKTLERFGNTSSSSVWYELAYLEA----NAGVKR---GDRIWQTAFGSGVKCNSVVWKAL 492 (508)
Q Consensus 432 ~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~----~gri~~---Gd~vlliafGsG~~~~sav~r~~ 492 (508)
+++++.+||.+|++||||||+++++.|+++.+ +|.... +++++++|||+||+..++++|.+
T Consensus 83 ~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 83 SPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp -GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred CHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 99999999999999999999999999999887 344433 48999999999999999999975
No 41
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.77 E-value=5e-18 Score=157.83 Aligned_cols=167 Identities=22% Similarity=0.304 Sum_probs=125.9
Q ss_pred CCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHH
Q 038123 112 TPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAA 191 (508)
Q Consensus 112 ~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~ 191 (508)
||++|.|.+++.|.|. +.++.+++.+.-+. ++. |+....|.++..+.++. |++.
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~--------------ED~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPD--------------EDIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TT--------------S-HH
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCc--------------ccHH
Confidence 7999999999999999 89999998876542 444 44444444455565554 3589
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCC--CCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKL--RHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl--~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
.|+..|++++|++.+++|++|+.|+++| |.....-+.+.+|++.||+ ..++..+|+. ++|.||..||+.|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 5566778899999999999 4578999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeC
Q 038123 269 YP--GSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSC 313 (508)
Q Consensus 269 g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~ 313 (508)
++ .+++|||++|+. + |...+ ....-|-||+|+|+++.
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~-----~e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGS-----AEPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-----TGGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEecccc-c--cCCCC-----ccccccceeEEEEecCC
Confidence 74 689999999984 2 22111 13567999999999975
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.75 E-value=4.4e-17 Score=169.65 Aligned_cols=309 Identities=15% Similarity=0.056 Sum_probs=200.7
Q ss_pred ceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHH-----HHHHHHhCCcceeecCCCccCCCCCCCccchHHH
Q 038123 115 WIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFK-----QRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREE 189 (508)
Q Consensus 115 ~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~-----~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~e 189 (508)
+|+|++.|+.-|=. .+.++-...++. +--+.+...|+ ++|..++|+.+|++. ..+.
T Consensus 4 ~v~I~~~g~vs~lG---~~~~~~~aa~ra-gi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------------~~~r 64 (348)
T PRK06147 4 ALAIVGSGMVTAVG---LDAPSSCAAIRA-RLDNFQETRFIDPPGGEWLIGAPVPLPPPWR---------------GPER 64 (348)
T ss_pred ceEEEecceeecCc---CCHHHHHHHHHc-ccccccccccccCCCCCceEeecCcCCcccC---------------chHH
Confidence 69999999999884 444444443321 10011100000 124444555444431 1234
Q ss_pred HHHHHHHHHHHHHHhCC-CCCCCccEEEEecc------CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATK-IRPKDIRVLVVNCG------VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLA 262 (508)
Q Consensus 190 a~~la~~Aa~~aL~~ag-i~p~dId~LI~~~s------~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA 262 (508)
..+|+..|++++|++++ +++++||++|+.++ ++...|.++..++.++|++....+++|+ .+|++++.||..|
T Consensus 65 ~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~A 143 (348)
T PRK06147 65 LAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQA 143 (348)
T ss_pred HHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHHH
Confidence 78999999999999999 79999999887643 2233456688999999996557889999 5999999999999
Q ss_pred HHHHHcCCCCeEEEEEeccCCCC----CC------CCCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeee
Q 038123 263 KDLLNAYPGSYALVVSTEVVSNT----WY------GGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHK 332 (508)
Q Consensus 263 ~~lL~~g~~~~aLVVs~E~~S~~----~~------~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~ 332 (508)
.++|+.+..+.+||+++|.++.. ++ ...++. ...+|||||+++||++.+....+ .-++.. ...
T Consensus 144 ~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g~ 216 (348)
T PRK06147 144 RRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LGL 216 (348)
T ss_pred HHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE---EEE
Confidence 99999999999999999986641 11 112222 36799999999999986542111 112221 111
Q ss_pred ccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEE
Q 038123 333 GMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHI 412 (508)
Q Consensus 333 ~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f 412 (508)
+.+...+. .+.+.|. .++.+ .+.+.++|+++++++ +|||++
T Consensus 217 ~~~~~~~~---------------~~~~~p~-~g~gl-----------------~~ai~~AL~~agl~~------~dId~v 257 (348)
T PRK06147 217 GREPAPVG---------------ESEDLPL-RGDGL-----------------TQAIRAALAEAGCGL------EDMDYR 257 (348)
T ss_pred eecCCCcc---------------cCCCCCC-ChHHH-----------------HHHHHHHHHHcCCCH------HHCCEE
Confidence 11111100 0000000 11111 123457888999998 999999
Q ss_pred EEcCCCHHHHHHH-----HHHcCCCHH--HHHHhhhhhcccCccccchHHHHHHHHHHh--CCCCCCCEEEEEeechHHh
Q 038123 413 CILATSKKVLDEI-----QKNLELTEE--LMEASRKTLERFGNTSSSSVWYELAYLEAN--AGVKRGDRIWQTAFGSGVK 483 (508)
Q Consensus 413 ~~Hq~~~~vld~v-----~~~Lgl~~e--~~~~s~~tl~r~GNtsSaSi~~~La~~~~~--gri~~Gd~vlliafGsG~~ 483 (508)
+.|..+....+.. .+.++-..+ .+ +.+-..+||+++|+-.++++.+... ....+|+++++++-.-.-.
T Consensus 258 ~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~---~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~ 334 (348)
T PRK06147 258 IADLNGEQYRFKEAALAEMRLFRVRKEFFDL---WHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGA 334 (348)
T ss_pred EcCCCCCccchHHHHHHHHHHhhhccCCCce---ecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCc
Confidence 9999877665443 334443212 23 3556779999999999998865432 4456799999999887777
Q ss_pred hhheeEEEe
Q 038123 484 CNSVVWKAL 492 (508)
Q Consensus 484 ~~sav~r~~ 492 (508)
.++++++..
T Consensus 335 r~a~~l~~~ 343 (348)
T PRK06147 335 RAALVLEYR 343 (348)
T ss_pred eEEEEEecc
Confidence 889998854
No 43
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.71 E-value=2.2e-16 Score=159.57 Aligned_cols=324 Identities=18% Similarity=0.258 Sum_probs=216.9
Q ss_pred cCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHH
Q 038123 111 TTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEA 190 (508)
Q Consensus 111 ~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea 190 (508)
.+|.+|.|.++-+|.|. +-|+++++..+-+. +.. .-..|+|+.... +...||+.
T Consensus 7 ~~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g--------KytIGLGq~~Mg------------fcsdrEDi 60 (462)
T KOG1393|consen 7 NWPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG--------KYTIGLGQTQMG------------FCSDREDI 60 (462)
T ss_pred cCccccceeEEEEEcCc--cccChhhHhhcCCc----ccc--------ceEeccCcceec------------ccCchhhh
Confidence 35779999999999999 68999998875442 221 234688876553 22335667
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcC--CCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYK--LRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lg--l~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..|...+..+++++-+++++.|+.|-|+|- .-.-.-|.-..+.+-++ -..++..+|..+ +|-||..||--|-++++
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiE 139 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIE 139 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhh
Confidence 888999999999999999999999999984 34456677777777776 445899999994 99999999999999999
Q ss_pred cCC--CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceee
Q 038123 268 AYP--GSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHL 344 (508)
Q Consensus 268 ~g~--~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~ 344 (508)
+.. ++++|||++|+.- |-.|+-|. .=|-||.|+|+++...- .+.. +..+|+. ..|+- |.
T Consensus 140 SssWDGr~aivV~gDIAv--Y~~G~aRp------TGGAgAVAmLIgPnApi------~ferglr~thM~---hayDF-yK 201 (462)
T KOG1393|consen 140 SSSWDGRYAIVVCGDIAV--YAKGNARP------TGGAGAVAMLIGPNAPI------IFERGLRATHMQ---HAYDF-YK 201 (462)
T ss_pred hcccCCceeEEEEeeEEE--ecCCCCCC------CCCcceEEEEEcCCCce------Eecccchhhhhh---hhhhc-cC
Confidence 975 7999999999831 22345444 45999999999986542 1111 2223321 12321 11
Q ss_pred ccCCCCCcccccchhhHHhhhhh-hhhhHHhccCcccchhhHHH-HHHHHHHhcCCCCCcccccccccEEEEcCCCHHHH
Q 038123 345 KEDAEGRQGLSVSKDMIEVGGHA-LKANITTLGPLVLPVSEQVH-FFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVL 422 (508)
Q Consensus 345 ~~d~~g~~g~~ls~d~~~~~g~a-l~~~i~~~g~~vlp~se~~~-~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vl 422 (508)
| .+..+.|.++|+- +..++..+.. .+. +..++-++.+-. -++=.++||++++|.+--++.
T Consensus 202 P---------dl~SEyPvVDGklSi~cYl~Ald~-------cY~~~~kK~~~~~~~~--~~~~l~~fdy~ifHsP~cKlv 263 (462)
T KOG1393|consen 202 P---------DLLSEYPVVDGKLSIQCYLSALDR-------CYTVYRKKIAAQWQKS--GSDNLNSFDYIIFHSPYCKLV 263 (462)
T ss_pred C---------CCCCcCceecCeehHHHHHHHHHH-------HHHHHHHHHHHHhccc--cCcccccCCeEEEeCchhhhH
Confidence 1 2344567776641 2222222111 111 122222221110 011126899999999887666
Q ss_pred HH-HH-----------------------------------------HHcCCCHHHHHHhhhhhcccCccccchHHHHHHH
Q 038123 423 DE-IQ-----------------------------------------KNLELTEELMEASRKTLERFGNTSSSSVWYELAY 460 (508)
Q Consensus 423 d~-v~-----------------------------------------~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~ 460 (508)
+. ++ -...+-.+++.+|...-.+.||+.++|+...|+.
T Consensus 264 qKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~s 343 (462)
T KOG1393|consen 264 QKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLAS 343 (462)
T ss_pred HHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHH
Confidence 54 11 1112223355554444468999999999999999
Q ss_pred HHHhC--CCCCCCEEEEEeechHHhhhheeEEEeccCCC
Q 038123 461 LEANA--GVKRGDRIWQTAFGSGVKCNSVVWKALRNVEK 497 (508)
Q Consensus 461 ~~~~g--ri~~Gd~vlliafGsG~~~~sav~r~~~~~~~ 497 (508)
++... .--.|.||.+.++|+|....-.-++...+..|
T Consensus 344 ll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p 382 (462)
T KOG1393|consen 344 LLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP 382 (462)
T ss_pred HHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc
Confidence 98875 34579999999999999877777777765543
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.71 E-value=1.4e-15 Score=154.02 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|+.+|++++|+++|++++|||.+|+++.+. .+..+..++++||+ +.|++++ +|++++.||.+|..++++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999887544 34568899999997 4599995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC---CCC---CC--CCccccccccccccceEEEEEeeCCC
Q 038123 270 PGSYALVVSTEVVSN---TWY---GG--NEVDMLLPNCFFRMGAAAVLLSSCRL 315 (508)
Q Consensus 270 ~~~~aLVVs~E~~S~---~~~---~~--~dr~~lv~~~lfgDGAaAvLLs~~~~ 315 (508)
..++||||++|..|. .+. .+ ++|. +..+|+|||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 999999999998772 111 22 4555 6899999999999998754
No 45
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.63 E-value=9.5e-15 Score=154.31 Aligned_cols=288 Identities=15% Similarity=0.149 Sum_probs=170.1
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcC-CCChhhHHHHHHHHHHhCCccee--ecCCCc--cCCCCCCCccchHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESG-NFNDASLEFKQRIIKNSGLGDET--YLPRAV--FCPGYRPNLKDGRE 188 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~-~~~~~~~~f~~~i~~~sGI~~r~--~~~~~~--~~~~~~~~~~~~~~ 188 (508)
++|+|+|+||..|.. .+.+++++.+.... .+.+-. +| +..+...+. ..+... ...++. ......
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~ 69 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPEDYLDRK--ELRRMD 69 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChhhcCCHH--HhccCC
Confidence 479999999999983 78888888764310 011000 00 001111111 111110 011110 001123
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccE----EEEeccCC---------------------------CCCCchHHHHHHHcC
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRV----LVVNCGVL---------------------------NTTPSLSAMVINHYK 237 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~----LI~~~s~~---------------------------~~~Ps~a~~v~~~lg 237 (508)
...+|+..|++++|+++|++++++|. ++++++.. ...+..+.+|+..+|
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 47789999999999999999876653 44443321 122457889999999
Q ss_pred CCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC---------------------CCCCCCccccc
Q 038123 238 LRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT---------------------WYGGNEVDMLL 296 (508)
Q Consensus 238 l~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~---------------------~~~~~dr~~lv 296 (508)
++ .+++.++ .+|++++.||..|.++|++|..++|||+++|..+.. ...+.|...
T Consensus 150 l~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~-- 224 (406)
T cd00834 150 LR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR-- 224 (406)
T ss_pred CC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC--
Confidence 96 5789999 599999999999999999999999999999987610 011111110
Q ss_pred cccccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhc
Q 038123 297 PNCFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTL 375 (508)
Q Consensus 297 ~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~ 375 (508)
...++||||+|+||++.+...++ +-++.. +.......|+.. ++. +...++.
T Consensus 225 ~g~~~geGA~a~vL~~~~~A~~~-g~~~~a~i~g~~~~~d~~~-----------------~~~--~~~~~~~-------- 276 (406)
T cd00834 225 DGFVLGEGAGVLVLESLEHAKAR-GAKIYAEILGYGASSDAYH-----------------ITA--PDPDGEG-------- 276 (406)
T ss_pred CCEeeeccEEEEEEecHHHHHHC-CCeEEEEEEEEEecccCCC-----------------CCC--CCCCcHH--------
Confidence 35789999999999986532111 111111 111111122110 000 0000111
Q ss_pred cCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCHHHHHHhhhhhcccCccc
Q 038123 376 GPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTEELMEASRKTLERFGNTS 450 (508)
Q Consensus 376 g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~e~~~~s~~tl~r~GNts 450 (508)
+.+.+.++++++++++ +|||++.+|..+....|.+ .+.++-..+++.- ..+-..+||+.
T Consensus 277 ---------~~~~i~~al~~agi~~------~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v-~s~k~~~Gh~~ 340 (406)
T cd00834 277 ---------AARAMRAALADAGLSP------EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPV-SSTKSMTGHLL 340 (406)
T ss_pred ---------HHHHHHHHHHHcCCCH------HHCCEEecccccCccccHHHHHHHHHHhcccCCCCce-eCcchhhccch
Confidence 1123457888999998 9999999999887665543 4444442222210 12335589999
Q ss_pred cchHHHHHHHH
Q 038123 451 SSSVWYELAYL 461 (508)
Q Consensus 451 SaSi~~~La~~ 461 (508)
+++-...|..+
T Consensus 341 ~AsG~~~l~~~ 351 (406)
T cd00834 341 GAAGAVEAIAT 351 (406)
T ss_pred hhhhHHHHHHH
Confidence 99988877754
No 46
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.58 E-value=1.3e-13 Score=140.15 Aligned_cols=237 Identities=17% Similarity=0.207 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|+.+|++++|+++|++++|||.+|+++...+ +..+..+++.+|+ +++++.+ +|+++..||.+|..++++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999998876433 4678899999986 6899995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC---CCCC----CCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccce
Q 038123 270 PGSYALVVSTEVVSN---TWYG----GNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCM 342 (508)
Q Consensus 270 ~~~~aLVVs~E~~S~---~~~~----~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~ 342 (508)
..++||||++|..+. .|.. +..|.. +...+++||+|+||++.... .++.+. +-|+--+
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~~-----~~i~~~------t~Gkv~D-- 193 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGSG-----PRITHA------TIGKVVD-- 193 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCCC-----ceEEEE------eEEEEEe--
Confidence 999999999998874 2322 233432 67899999999999986543 223221 1111100
Q ss_pred eeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEc---CCCH
Q 038123 343 HLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICIL---ATSK 419 (508)
Q Consensus 343 ~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~H---q~~~ 419 (508)
.|+ +|-.++.. ++ -|.. ..-+.+.++..+.+| +|.|.++.- ..|+
T Consensus 194 ---------~g~---~d~~nmga-aM-----------apAa--~dti~~h~~d~~~~~------~~yDli~tGDlg~vG~ 241 (337)
T PRK08304 194 ---------LGI---KDPNDMGA-AM-----------APAA--ADTIQQHFKDTGRSP------EDYDLIVTGDLGRVGR 241 (337)
T ss_pred ---------cCC---CCcccchh-hh-----------hHHH--HHHHHHHHHHcCCCh------hhccEEEEcchHHHHH
Confidence 011 11111111 00 0100 011234556668888 899988874 4677
Q ss_pred HHHHHHHHHcCCCHHHHHH-hhhhhcc-------cCcccc-chHHHHHHHHHHhCCCCCC--CEEEEEeechHH
Q 038123 420 KVLDEIQKNLELTEELMEA-SRKTLER-------FGNTSS-SSVWYELAYLEANAGVKRG--DRIWQTAFGSGV 482 (508)
Q Consensus 420 ~vld~v~~~Lgl~~e~~~~-s~~tl~r-------~GNtsS-aSi~~~La~~~~~gri~~G--d~vlliafGsG~ 482 (508)
.++..+.++-|++.++... .=..+.+ -|-.|+ +|--+...|++.+ +++| .||++++.|+=+
T Consensus 242 ~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~--~~~g~~~rvl~v~tGaLl 313 (337)
T PRK08304 242 EILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKE--LQKGKLKRVLVVATGALL 313 (337)
T ss_pred HHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHHHHHHHHH--HhcCCceEEEEEEchhhc
Confidence 8888888887877653310 0001111 111121 2222233455542 4444 489999988744
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.58 E-value=5.9e-14 Score=148.19 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++++|||.||++++ ++...|..+..++..+|++.++++++++ ++|++++.+|.+|..++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998754 4555777888899999997558999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 038123 269 YPGSYALVVSTEVVS 283 (508)
Q Consensus 269 g~~~~aLVVs~E~~S 283 (508)
|..++|||+++|.+|
T Consensus 101 G~~~~vLv~g~e~~s 115 (386)
T cd00751 101 GEADVVVAGGVESMS 115 (386)
T ss_pred CCCCeEEEeeeeccc
Confidence 999999999999765
No 48
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.52 E-value=6.1e-13 Score=141.63 Aligned_cols=223 Identities=14% Similarity=0.143 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccC-CCC-------------------CCchHHHHHHHcCCCCCceEE
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIR----VLVVNCGV-LNT-------------------TPSLSAMVINHYKLRHNINSF 245 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId----~LI~~~s~-~~~-------------------~Ps~a~~v~~~lgl~~~~~~~ 245 (508)
...|+..|++++|+++|+++++|| .||++++. ++. .+..+..|+..+|++ .+++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 567899999999999999999998 77777531 111 345678899999997 4789
Q ss_pred EecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC----------------CCCCCCCccccccccccccceEEEE
Q 038123 246 NLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSN----------------TWYGGNEVDMLLPNCFFRMGAAAVL 309 (508)
Q Consensus 246 dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~----------------~~~~~~dr~~lv~~~lfgDGAaAvL 309 (508)
+++ .+|++++.||..|.++|++|..++|||+++|.... ....+.+... ...++||||+|+|
T Consensus 165 ~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~--~g~~~geGAaalV 241 (424)
T smart00825 165 TVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADA--DGYVRGEGVGVVV 241 (424)
T ss_pred ccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCC--CcccccceEEEEE
Confidence 999 59999999999999999999999999999997431 0111111111 3578999999999
Q ss_pred EeeCCCCcccccccee-eEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHH
Q 038123 310 LSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHF 388 (508)
Q Consensus 310 Ls~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~ 388 (508)
|++.+...++ +..+. .+......+++.. . + +.. + .+... ...
T Consensus 242 Le~~e~A~~~-g~~i~a~I~g~~~~~~~~~-~------------~--~~~--~--~~~~~-----------------~~a 284 (424)
T smart00825 242 LKRLSDALRD-GDPILAVIRGSAVNQDGRS-N------------G--LTA--P--SGPAQ-----------------ARL 284 (424)
T ss_pred EccHHHHHHC-CCeEEEEEEEEEEeCCCCC-C------------C--CCC--c--CHHHH-----------------HHH
Confidence 9975432111 11111 1122222222110 0 0 000 0 00100 123
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHH-----HHHHHHcCCCH---HHHHHhhhhhcccCccccchHHHHHHH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVL-----DEIQKNLELTE---ELMEASRKTLERFGNTSSSSVWYELAY 460 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vl-----d~v~~~Lgl~~---e~~~~s~~tl~r~GNtsSaSi~~~La~ 460 (508)
+..+|+++|+++ +|||++..|..+.... +.+.+.++... .++. --.+-..+||+.+++-.++|..
T Consensus 285 ~~~al~~Agl~~------~dId~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~-v~s~k~~~Gh~~~AsG~~~l~~ 357 (424)
T smart00825 285 IRQALARAGVDP------ADVDYVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLL-LGSVKSNIGHLEAAAGVAGLIK 357 (424)
T ss_pred HHHHHHHhCCCH------HHccEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceE-EeccccccCCcccchhHHHHHH
Confidence 456788999998 9999999997665433 33444554311 1110 0123345799999988888765
Q ss_pred H
Q 038123 461 L 461 (508)
Q Consensus 461 ~ 461 (508)
+
T Consensus 358 ~ 358 (424)
T smart00825 358 V 358 (424)
T ss_pred H
Confidence 4
No 49
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.52 E-value=4.2e-13 Score=141.78 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
...+|+.+|++++|+++|++++|||.+|+++. +....|..+..++..+|++.++++++++ .+|++++.++.+|.++++
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIR 98 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998764 4444577788899999998568999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..++|||+++|.+|.
T Consensus 99 sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 99 AGEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998653
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.51 E-value=6.6e-13 Score=140.55 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|+|||.+|++|. +....|..+..++..+|++..+++|+++ .+|++|+.++.+|.+++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999875 3334567788899999998558999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997664
No 51
>PRK09051 beta-ketothiolase; Provisional
Probab=99.51 E-value=1.1e-12 Score=138.75 Aligned_cols=94 Identities=17% Similarity=0.160 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCC-chHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTP-SLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~P-s~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++|+|||.+|++|+ ++...+ ..+..+...+|++.++++++++ .+|++|+.|+.+|.++++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 444333 4555666778997679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..++|||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998774
No 52
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.48 E-value=1.6e-12 Score=137.42 Aligned_cols=92 Identities=17% Similarity=0.133 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCC--CCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLN--TTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~--~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
..+|+.+|++++|+++|+++++||.+|++++ ++. ..|..+.+++..+|++ .+++++++ ++|++++.+|..|..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 6889999999999999999999999998754 333 2467788999999997 78999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCC
Q 038123 267 NAYPGSYALVVSTEVVS 283 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S 283 (508)
++|..++|||+++|..|
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999755
No 53
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.46 E-value=3.2e-12 Score=135.37 Aligned_cols=286 Identities=12% Similarity=0.103 Sum_probs=163.2
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcC-CCChhhHHHHHHHHHHhCCccee--ecC---CCccCCCCCCCccchH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESG-NFNDASLEFKQRIIKNSGLGDET--YLP---RAVFCPGYRPNLKDGR 187 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~-~~~~~~~~f~~~i~~~sGI~~r~--~~~---~~~~~~~~~~~~~~~~ 187 (508)
++|.|+|+|+..|-. .+.+++.+.+..-. .+.+-. +| +..+...+. .++ +..+ +++. -....
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~~-~~-----~~~~~~~~~~g~i~~f~~~~~-~~~~--~~~~~ 68 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPIT-RF-----DASDLPVKIAGEVKDFDPEDY-IDKK--EARRM 68 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEECC-cc-----cccCCCCcEEEEeCCcChhhc-CCHH--HHhhc
Confidence 479999999999984 68899988765310 011100 00 000111000 011 0000 1110 00111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccE----EEEeccCC------------------C--------CCC-chHHHHHHHc
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRV----LVVNCGVL------------------N--------TTP-SLSAMVINHY 236 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~----LI~~~s~~------------------~--------~~P-s~a~~v~~~l 236 (508)
....+++..|++++|+++|++++++|. ++++++.. . ..+ ..+..|...+
T Consensus 69 ~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 69 DRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred CHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 235789999999999999999998875 55554211 0 011 2456788899
Q ss_pred CCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC-----------C----------CCCCCcccc
Q 038123 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT-----------W----------YGGNEVDML 295 (508)
Q Consensus 237 gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~-----------~----------~~~~dr~~l 295 (508)
|++ .+++.+. .+|++++.||..|..+|++|..+.+||+++|..... + ..+.|+..
T Consensus 149 gl~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~- 224 (407)
T TIGR03150 149 GAK--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDR- 224 (407)
T ss_pred CCC--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCC-
Confidence 995 5788999 599999999999999999999999999999963210 0 00111111
Q ss_pred ccccccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHh
Q 038123 296 LPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITT 374 (508)
Q Consensus 296 v~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~ 374 (508)
...++||||+|+||++.+...++ +-++.. +.......|+.. ++. |...+..
T Consensus 225 -~g~~~gEGAaalvL~~~~~A~~~-g~~i~a~i~g~~~~~d~~~-----------------~~~--~~~~~~~------- 276 (407)
T TIGR03150 225 -DGFVMGEGAGVLVLEELEHAKAR-GAKIYAEIVGYGMSGDAYH-----------------ITA--PAPEGEG------- 276 (407)
T ss_pred -CcEEEeceEEEEEEeeHHHHHHC-CCeEEEEEEEEEECCCCCC-----------------CCC--CCCCcHH-------
Confidence 24678999999999986532111 111111 111111111110 000 0000110
Q ss_pred ccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHH-----HHHHHHcCCCHHHHHHhhhhhcccCcc
Q 038123 375 LGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVL-----DEIQKNLELTEELMEASRKTLERFGNT 449 (508)
Q Consensus 375 ~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vl-----d~v~~~Lgl~~e~~~~s~~tl~r~GNt 449 (508)
+.+.+.++++++|+++ +|||++..|..+...- ..+.+.++-...++.- -..-..+||+
T Consensus 277 ----------~~~ai~~Al~~Agi~~------~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v-~s~k~~~Gh~ 339 (407)
T TIGR03150 277 ----------AARAMRAALKDAGINP------EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAV-SSTKSMTGHL 339 (407)
T ss_pred ----------HHHHHHHHHHHcCCCH------hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCce-eCCcchhchh
Confidence 1123457888999998 9999999999887443 3455666543222210 1122346999
Q ss_pred ccchHHHHHHH
Q 038123 450 SSSSVWYELAY 460 (508)
Q Consensus 450 sSaSi~~~La~ 460 (508)
.+++-...+..
T Consensus 340 ~~AsG~~~~~~ 350 (407)
T TIGR03150 340 LGAAGAIEAIF 350 (407)
T ss_pred HHHHHHHHHHH
Confidence 88776666554
No 54
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=2.6e-12 Score=135.93 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCc-hHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPS-LSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps-~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+.+|+.+|++++|+++|++|++||.+|+++. ++...|+ .+..+..++|++.++++++++ ++|++|+.|+.+|..+|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 4555554 788999999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999874
No 55
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=2.3e-12 Score=136.67 Aligned_cols=94 Identities=17% Similarity=0.197 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCccEEEEecc-CCCCCCchHHHHH-HHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAAT-KIRPKDIRVLVVNCG-VLNTTPSLSAMVI-NHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~a-gi~p~dId~LI~~~s-~~~~~Ps~a~~v~-~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+.+|+.+|++++|+++ |++|+|||.||++|+ ++...|...++++ ..+|++..+++++++ .+|++|+.|+..|..++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 6899999999999997 999999999999864 4555555566654 455997458999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 038123 267 NAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~ 284 (508)
++|..+.|||+++|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998764
No 56
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.46 E-value=7.5e-12 Score=133.87 Aligned_cols=305 Identities=17% Similarity=0.166 Sum_probs=180.2
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCcc---------CCCCCCCcc
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVF---------CPGYRPNLK 184 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~---------~~~~~~~~~ 184 (508)
.+|.|+|+|+..|-. .+.+++.+.+.. |. +||.+-..++.... ..++.. ..
T Consensus 11 ~~VvITG~G~vs~~G---~~~~~~~~~L~~-G~---------------s~i~~~~~~~~~~~~~~~~g~~~~~~~~~-~~ 70 (425)
T PRK06501 11 PIVAVTGMGVVTSLG---QGKADNWAALTA-GE---------------SGIHTITRFPTEGLRTRIAGTVDFLPESP-FG 70 (425)
T ss_pred cCEEEEeeeEECCCC---CCHHHHHHHHHc-CC---------------CceEcCCcccccCCCCceEEEEeeccccc-cc
Confidence 369999999999984 688988887653 11 22221111000000 000100 00
Q ss_pred chHHHHHHHHHHHHHHHHHhCCCCCCCcc------------------EEEEecc----------------CC-------C
Q 038123 185 DGREEAAMVLFGAIDDLLAATKIRPKDIR------------------VLVVNCG----------------VL-------N 223 (508)
Q Consensus 185 ~~~~ea~~la~~Aa~~aL~~agi~p~dId------------------~LI~~~s----------------~~-------~ 223 (508)
.......++..|++++|+++|+++.+.+ .++..+. +. .
T Consensus 71 -~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (425)
T PRK06501 71 -ASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERF 149 (425)
T ss_pred -ccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhh
Confidence 1123567889999999999999654321 1222211 01 1
Q ss_pred CCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc---------------CCCC--C
Q 038123 224 TTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEV---------------VSNT--W 286 (508)
Q Consensus 224 ~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~---------------~S~~--~ 286 (508)
..|+.+..|+.++|++ .++++++ .+|++++.||..|.++|++|..+++||+++|. ++.. +
T Consensus 150 ~~~~~a~~i~~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~ 226 (425)
T PRK06501 150 QFGSIADRLADRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDP 226 (425)
T ss_pred cccHHHHHHHHHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCC
Confidence 3467899999999996 5789999 59999999999999999999999999999993 2210 0
Q ss_pred ----CCC--CCccccccccccccceEEEEEeeCCCCccccccceeeEEe-eeeccCCccccceeeccCCCCCcccccchh
Q 038123 287 ----YGG--NEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVR-THKGMDNRSFKCMHLKEDAEGRQGLSVSKD 359 (508)
Q Consensus 287 ----~~~--~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~-t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d 359 (508)
..+ .+|+ ..++||||+|+||++.+...++ +.++...+. +....|+ +. ...
T Consensus 227 ~~~~~rpfd~~r~----G~v~GEGaaalVLe~~~~A~~r-g~~i~a~i~g~~~~~d~--~~---------------~~~- 283 (425)
T PRK06501 227 PEKASKPFSKDRD----GFVMAEGAGALVLESLESAVAR-GAKILGIVAGCGEKADS--FH---------------RTR- 283 (425)
T ss_pred CCcccCCCCCCCC----CeeeeccEEEEEECcHHHHHHC-CCeEEEEEEEEEEccCC--CC---------------CCC-
Confidence 011 2343 4789999999999986532111 222222221 1111111 00 000
Q ss_pred hHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHH-----HHcCCCHH
Q 038123 360 MIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQ-----KNLELTEE 434 (508)
Q Consensus 360 ~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~-----~~Lgl~~e 434 (508)
+...+..+ .+.+.++|+++++.+ +|||++..|..+....|..+ +.++-...
T Consensus 284 -~~~~~~~~-----------------~~ai~~AL~~agi~p------~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~ 339 (425)
T PRK06501 284 -SSPDGSPA-----------------IGAIRAALADAGLTP------EQIDYINAHGTSTPENDKMEYLGLSAVFGERLA 339 (425)
T ss_pred -CCCCHHHH-----------------HHHHHHHHHHcCCCH------HHcCEEEecCccCcchHHHHHHHHHHHhcccCC
Confidence 00011111 123457888999998 99999999999887776654 34442111
Q ss_pred HHHHhhhhhcccCccccchHHHHHHH---HHHhCCCCC------------------------CCEEEEEeechHHhhhhe
Q 038123 435 LMEASRKTLERFGNTSSSSVWYELAY---LEANAGVKR------------------------GDRIWQTAFGSGVKCNSV 487 (508)
Q Consensus 435 ~~~~s~~tl~r~GNtsSaSi~~~La~---~~~~gri~~------------------------Gd~vlliafGsG~~~~sa 487 (508)
++. -..+=..+||+.+++-.+++.. .+++|.+.+ -++++.-+||-|-.-.++
T Consensus 340 ~~p-v~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~ 418 (425)
T PRK06501 340 SIP-VSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASL 418 (425)
T ss_pred CcE-EECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEE
Confidence 221 0122345799998887777754 344444322 234556677777666666
Q ss_pred eEE
Q 038123 488 VWK 490 (508)
Q Consensus 488 v~r 490 (508)
|++
T Consensus 419 vl~ 421 (425)
T PRK06501 419 VLT 421 (425)
T ss_pred EEe
Confidence 665
No 57
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.45 E-value=4.7e-12 Score=132.87 Aligned_cols=94 Identities=18% Similarity=0.145 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+..+|+.+|++++|+++|+++++||.++++++ +....|..+.+++.++|++ ++++++++ .+|++++.++..|..+++
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999998764 4433577889999999997 78999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+.|||+++|..+.
T Consensus 93 sG~~~~vlv~g~e~~s~ 109 (375)
T cd00829 93 SGLADVVLVVGAEKMSD 109 (375)
T ss_pred hCCCCEEEEEEEeeccc
Confidence 99999999999998764
No 58
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.45 E-value=3.1e-12 Score=135.56 Aligned_cols=222 Identities=15% Similarity=0.081 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC-cc----EEEEeccCC-----------------------CCC--CchHHHHHHHcCC
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKD-IR----VLVVNCGVL-----------------------NTT--PSLSAMVINHYKL 238 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~d-Id----~LI~~~s~~-----------------------~~~--Ps~a~~v~~~lgl 238 (508)
....++..|++++|+++|+++++ ++ .++++++.. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 46788999999999999998766 43 244443210 111 4567889999999
Q ss_pred CCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC--------------C------CCCCCCccccccc
Q 038123 239 RHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSN--------------T------WYGGNEVDMLLPN 298 (508)
Q Consensus 239 ~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~--------------~------~~~~~dr~~lv~~ 298 (508)
+ ..+++.++ .+|++++.||..|.++|++|..+.+||+++|..+. . ...+.|+.. ..
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~--~G 226 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR--DG 226 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--Cc
Confidence 3 35789999 59999999999999999999999999999998651 0 011122211 35
Q ss_pred cccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccC
Q 038123 299 CFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGP 377 (508)
Q Consensus 299 ~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~ 377 (508)
+++||||+++||++.+...++. -++.. +.......|+.. .+ .+. .++.
T Consensus 227 ~~~gEGAaalvLe~~~~A~~rg-~~i~a~i~g~~~~~d~~~-----------------~~--~~~-~~~~---------- 275 (407)
T cd00828 227 FVEAEGAGVLVLERAELALARG-APIYGRVAGTASTTDGAG-----------------RS--VPA-GGKG---------- 275 (407)
T ss_pred EEeecceEEEEEeeHHHHHHCC-CeEEEEEEEEEeccCCCC-----------------CC--CCC-ChHH----------
Confidence 7899999999999865422111 11111 111111122110 00 000 1111
Q ss_pred cccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCC--HHHHHHhhhhhcccCccc
Q 038123 378 LVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELT--EELMEASRKTLERFGNTS 450 (508)
Q Consensus 378 ~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~--~e~~~~s~~tl~r~GNts 450 (508)
+.+.+.++++++++.+ +|||++..|..+....|.. .+.++-. .-.+ ..+-..+||+.
T Consensus 276 -------~~~a~~~Al~~Agi~~------~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v---~s~K~~~Gh~~ 339 (407)
T cd00828 276 -------IARAIRTALAKAGLSL------DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPV---TAQKALFGHSK 339 (407)
T ss_pred -------HHHHHHHHHHHcCCCH------HHcCEEecccccCccccHHHHHHHHHHHhccCCCcee---ecccchhccch
Confidence 1123457888999998 9999999998777655443 3334321 1123 34557799999
Q ss_pred cchHHHHHHHH
Q 038123 451 SSSVWYELAYL 461 (508)
Q Consensus 451 SaSi~~~La~~ 461 (508)
+++-.++|...
T Consensus 340 ~Asg~~~l~~~ 350 (407)
T cd00828 340 GAAGALQLIGA 350 (407)
T ss_pred hhhhHHHHHHH
Confidence 99998888754
No 59
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.43 E-value=8.6e-12 Score=131.78 Aligned_cols=92 Identities=20% Similarity=0.046 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNT--TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~--~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++++|||.+|++++++.. .+..+..+++++|++ +.++++++ .+|+++..++..|..+|+
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987654322 122336899999997 68899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 038123 268 AYPGSYALVVSTEVVS 283 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S 283 (508)
+|..++||||++|..+
T Consensus 102 sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 102 SGVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCCEEEEEEEEEcc
Confidence 9999999999999764
No 60
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.42 E-value=3e-13 Score=111.34 Aligned_cols=79 Identities=27% Similarity=0.363 Sum_probs=60.6
Q ss_pred EEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCCCccccccce
Q 038123 245 FNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEF 324 (508)
Q Consensus 245 ~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L 324 (508)
|||+ ++|++++.||++|.++++++..++||||++|+.+. +.++.++. +..+|||||+|+||++.+.. .+++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecCCC----CCeE
Confidence 7999 59999999999999999999999999999999887 54445555 45799999999999997432 3544
Q ss_pred eeEEeeeeccC
Q 038123 325 KQLVRTHKGMD 335 (508)
Q Consensus 325 ~~~~~t~~~sd 335 (508)
+ .++..+|
T Consensus 72 l---~~~~~td 79 (80)
T PF08545_consen 72 L---DSHLRTD 79 (80)
T ss_dssp E---EEEEEE-
T ss_pred E---EEEEEcC
Confidence 3 4444454
No 61
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=1.2e-11 Score=130.54 Aligned_cols=92 Identities=15% Similarity=0.177 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++|+|||.+|++++. ....+..+..++..+|++ +.++++++ ++|++++.||.+|..+|++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999999988643 222233478899999998 56789999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 038123 269 YPGSYALVVSTEVVS 283 (508)
Q Consensus 269 g~~~~aLVVs~E~~S 283 (508)
|..++||||++|..|
T Consensus 99 G~~~~vLvvg~e~~s 113 (385)
T PRK12578 99 GLVDMAIAVGVDKMT 113 (385)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999755
No 62
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.41 E-value=1.9e-11 Score=129.82 Aligned_cols=317 Identities=13% Similarity=0.095 Sum_probs=182.5
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcC-CCChhhHHHHHHHHHHhCCccee--ecCC---CccCCCCCCCccchH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESG-NFNDASLEFKQRIIKNSGLGDET--YLPR---AVFCPGYRPNLKDGR 187 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~-~~~~~~~~f~~~i~~~sGI~~r~--~~~~---~~~~~~~~~~~~~~~ 187 (508)
++|.|+|+||..|-. .+.++|++.+..-. .+.+-. +| ...+...+. .++. ..+ +++. . ....
T Consensus 2 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~g~~~~~~~~-~~-----~~~~~~~~~~g~i~~f~~~~~-~~~~-~-~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPLG---NDVESTWKNLLAGKSGIGPIT-HF-----DTSDLAVKIAGEVKDFNPDDY-MSRK-E-ARRM 69 (411)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHhCCCcEEECC-cc-----cccCCCccEEEEeCCcChhhc-CCHH-H-hhcC
Confidence 479999999999984 78899998765310 011000 00 001111110 0110 000 1110 0 0111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC--------------------------CCCCc-hHHHHHHHc
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIR----VLVVNCGVL--------------------------NTTPS-LSAMVINHY 236 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId----~LI~~~s~~--------------------------~~~Ps-~a~~v~~~l 236 (508)
.....|+..|+.++|+++|++++++| .++++++.. ...++ .+..+...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 23578899999999999999998887 466654311 01122 467789999
Q ss_pred CCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---------------------CCCCCcccc
Q 038123 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTW---------------------YGGNEVDML 295 (508)
Q Consensus 237 gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~---------------------~~~~dr~~l 295 (508)
|++ -+++.++ .+|++++.||..|.++|++|..+.|||.++|..+..+ ..+.|+..
T Consensus 150 gl~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~- 225 (411)
T PRK07314 150 GAK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR- 225 (411)
T ss_pred CCC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC-
Confidence 996 4788888 4999999999999999999999999999999643200 00111111
Q ss_pred ccccccccceEEEEEeeCCCCcccccccee-eEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHh
Q 038123 296 LPNCFFRMGAAAVLLSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITT 374 (508)
Q Consensus 296 v~~~lfgDGAaAvLLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~ 374 (508)
..+++||||+|+||++.+..+++ +-++. .+.......|+.. ++. |...+..
T Consensus 226 -dG~~~geGAaavvL~~~~~A~~~-g~~~~a~I~g~~~~~d~~~-----------------~~~--~~~~~~~------- 277 (411)
T PRK07314 226 -DGFVMGEGAGILVLEELEHAKAR-GAKIYAEVVGYGMTGDAYH-----------------MTA--PAPDGEG------- 277 (411)
T ss_pred -CCEeEEceEEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC-----------------CCC--CCCCcHH-------
Confidence 35789999999999986532111 11111 1111111112110 000 0000000
Q ss_pred ccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCHHHHHHhhhhhcccCcc
Q 038123 375 LGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTEELMEASRKTLERFGNT 449 (508)
Q Consensus 375 ~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~e~~~~s~~tl~r~GNt 449 (508)
+.+.+.++++++|+++ +|||++..|..+...-|.+ .+.++....++.- -..-..+||+
T Consensus 278 ----------~~~a~~~Al~~agi~~------~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v-~s~k~~~Gh~ 340 (411)
T PRK07314 278 ----------AARAMKLALKDAGINP------EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAV-SSTKSMTGHL 340 (411)
T ss_pred ----------HHHHHHHHHHHcCCCH------HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCee-ECccchhchh
Confidence 1123457888999998 9999999999887665554 3445532222210 1122447999
Q ss_pred ccchHHHHHHH---HHHhCCCC------------------------CCCEEEEEeechHHhhhheeEEE
Q 038123 450 SSSSVWYELAY---LEANAGVK------------------------RGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 450 sSaSi~~~La~---~~~~gri~------------------------~Gd~vlliafGsG~~~~sav~r~ 491 (508)
.+|+-...+.. .++.|.+. +-++++.-+||-|-.-.++|++.
T Consensus 341 ~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 341 LGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 88876666554 23333322 22456777888777666776653
No 63
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.41 E-value=1.4e-11 Score=130.62 Aligned_cols=94 Identities=13% Similarity=0.223 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCC-CchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTT-PSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~-Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+.+|+..|++++|+++|++|++||.+|++|. +.... +..+.......|++.++++++|+ ++|++|+.||.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 7899999999999999999999999999875 43333 34566677888997679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+++|++++|.+|.
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999885
No 64
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=1.1e-11 Score=131.23 Aligned_cols=94 Identities=17% Similarity=0.177 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|..+|++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999999875 3112344556789999997679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..++|||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999998874
No 65
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.39 E-value=1.3e-11 Score=131.06 Aligned_cols=93 Identities=18% Similarity=0.230 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++|+|||.+|++|+ +....|..+.+++..+|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999864 4555688888899999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 038123 269 YPGSYALVVSTEVVS 283 (508)
Q Consensus 269 g~~~~aLVVs~E~~S 283 (508)
|..+.|||+++|.+|
T Consensus 105 G~~d~vLv~G~E~ms 119 (404)
T PRK06205 105 GAADVVIAGGAESMS 119 (404)
T ss_pred CCCCEEEEeeehhhc
Confidence 999999999999876
No 66
>PRK05790 putative acyltransferase; Provisional
Probab=99.39 E-value=1.8e-11 Score=129.66 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|+|||.+|+++. +....+..+..++..+|++.++++++++ .+|++++.+|..|.+++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999998763 2222344455677788997568899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 038123 269 YPGSYALVVSTEVVS 283 (508)
Q Consensus 269 g~~~~aLVVs~E~~S 283 (508)
|..++|||+++|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999998753
No 67
>PRK06059 lipid-transfer protein; Provisional
Probab=99.38 E-value=3e-11 Score=128.15 Aligned_cols=92 Identities=16% Similarity=0.057 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC--CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV--LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~--~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++++|||.||++++. ....+..+..++.++|++ ++++++++ .+|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999987542 233455678999999997 68899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 038123 268 AYPGSYALVVSTEVVS 283 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S 283 (508)
+|..++||||++|..|
T Consensus 101 sG~~~~vLvvg~e~~s 116 (399)
T PRK06059 101 AGLCDVALVVGADTTP 116 (399)
T ss_pred CCCCCEEEEEEEcccC
Confidence 9999999999999765
No 68
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.36 E-value=4.7e-11 Score=126.73 Aligned_cols=224 Identities=14% Similarity=0.150 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccE----EEEecc-CC-------------------CCCCchHHHHHHHcCCCCCceE
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRV----LVVNCG-VL-------------------NTTPSLSAMVINHYKLRHNINS 244 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~----LI~~~s-~~-------------------~~~Ps~a~~v~~~lgl~~~~~~ 244 (508)
....|+..|++++|+++|++++++|. ++++++ .+ ...+..+..+...+|++ .++
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~ 163 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPS 163 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCc
Confidence 36789999999999999999887763 555543 11 01144678899999996 488
Q ss_pred EEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------------CCCCCCccccccccccccceEEE
Q 038123 245 FNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT----------------WYGGNEVDMLLPNCFFRMGAAAV 308 (508)
Q Consensus 245 ~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----------------~~~~~dr~~lv~~~lfgDGAaAv 308 (508)
+.++ .+|++++.||..|.++|++|..+.+||+++|..+.. ...+.++. -...++||||+|+
T Consensus 164 ~~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (421)
T cd00833 164 LTVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD--ADGYVRGEGVGVV 240 (421)
T ss_pred eeec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC--CCCeeeeceEEEE
Confidence 9999 599999999999999999999999999999975310 01111111 1357899999999
Q ss_pred EEeeCCCCccccccceeeEE-eeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHH
Q 038123 309 LLSSCRLDKWRSKYEFKQLV-RTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVH 387 (508)
Q Consensus 309 LLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~ 387 (508)
||++.+...++. -++...+ ......|+.. .....| .++.. .+
T Consensus 241 vL~~~~~A~~~g-~~~~a~i~g~~~~~~~~~-----------------~~~~~p--~~~~~-----------------~~ 283 (421)
T cd00833 241 VLKRLSDALRDG-DRIYAVIRGSAVNQDGRT-----------------KGITAP--SGEAQ-----------------AA 283 (421)
T ss_pred EEeeHHHHHHCC-CeEEEEEEEEEEcCCCCC-----------------CCCcCC--CHHHH-----------------HH
Confidence 999865421111 1111111 1111112110 000001 01111 12
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCH---HHHHHhhhhhcccCccccchHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTE---ELMEASRKTLERFGNTSSSSVWYELA 459 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~---e~~~~s~~tl~r~GNtsSaSi~~~La 459 (508)
.+..+|+++|+++ +|||++..|..+...-|.. .+.++-.. ..+ +...+-..+||+.+++-..+|.
T Consensus 284 a~~~al~~Agi~~------~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~-~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 284 LIRRAYARAGVDP------SDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPL-LIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHhCCCH------HHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCce-eeecCcCccccchhhhHHHHHH
Confidence 3457888999998 9999999999886554433 33332210 111 1023334599999998887776
Q ss_pred HH
Q 038123 460 YL 461 (508)
Q Consensus 460 ~~ 461 (508)
..
T Consensus 357 ~~ 358 (421)
T cd00833 357 KV 358 (421)
T ss_pred HH
Confidence 53
No 69
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.36 E-value=2.9e-11 Score=128.23 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|+|||.+|++++. .....+.+......+|++.++++++++ ++|++|+.|+..|..++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999998653 333334444455567777679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 038123 269 YPGSYALVVSTEVVS 283 (508)
Q Consensus 269 g~~~~aLVVs~E~~S 283 (508)
|..+.+||+++|.+|
T Consensus 110 G~~d~vLv~G~E~ms 124 (397)
T PRK06954 110 GSVDVIVAGGMESMT 124 (397)
T ss_pred CCCCEEEEEeeeccC
Confidence 999999999999887
No 70
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=4.8e-11 Score=126.49 Aligned_cols=91 Identities=12% Similarity=0.263 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCC---chHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNTTP---SLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~~P---s~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~l 265 (508)
..+|+.+|++++|+++|++|+|||.+|+++.. ....| +....+...++ .++++++++ ++|++|+.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 68999999999999999999999999988643 22223 33444555555 468999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCC
Q 038123 266 LNAYPGSYALVVSTEVVS 283 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S 283 (508)
+++|..++|||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999765
No 71
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=7.3e-11 Score=125.13 Aligned_cols=282 Identities=15% Similarity=0.140 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNT--TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~--~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
.+.+|+..+++.+++++|++|++||-||++|..... .+.++.+..-+-||+.+++++.|+ +.|++++.|+.+|.+.+
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHH
Confidence 378999999999999999999999999999863322 477899999999999899999999 79999999999999999
Q ss_pred HcCCCCeEEEEEeccCCCCCC--C-----C-----CC------------cccc---------------------------
Q 038123 267 NAYPGSYALVVSTEVVSNTWY--G-----G-----NE------------VDML--------------------------- 295 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~~~~--~-----~-----~d------------r~~l--------------------------- 295 (508)
++|..+-+|..++|.+|...+ . + .| ..|-
T Consensus 107 ~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~~~isRe~~D~~A~~Sh~r 186 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATMEGITREALDALGLESQRR 186 (417)
T ss_pred HcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 999999999999999995321 1 1 00 0010
Q ss_pred ----ccccccccceE-------EEEEeeCCCCcc----------ccccce--------eeE------------------E
Q 038123 296 ----LPNCFFRMGAA-------AVLLSSCRLDKW----------RSKYEF--------KQL------------------V 328 (508)
Q Consensus 296 ----v~~~lfgDGAa-------AvLLs~~~~~~~----------~~~~~L--------~~~------------------~ 328 (508)
..+..|-+=-. .+++..++..+. ++-|+= .++ +
T Consensus 187 A~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 266 (417)
T PRK06025 187 AARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVH 266 (417)
T ss_pred HHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccccccccccccccccccccc
Confidence 00111211101 133554433221 112310 011 0
Q ss_pred --ee-eeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccc
Q 038123 329 --RT-HKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDY 405 (508)
Q Consensus 329 --~t-~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~ 405 (508)
.+ ...+|+... .+...++.....|. .+ ...+.+-. .....|..++.. ....+.++|+++|+++
T Consensus 267 TagNss~~sDGAAA-vVL~See~A~~lg~--~p-~a~I~g~~----~a~~~p~~~~~~-p~~Ai~~aL~~AGl~~----- 332 (417)
T PRK06025 267 HAGNSSGVVDGAAA-LLLASKAYAEKHGL--KP-RARIVAMA----NMGDDPTLMLNA-PVPAAKKVLAKAGLTK----- 332 (417)
T ss_pred cccccCCCCcceEE-EEEecHHHHHHcCC--CC-cEEEEEEE----EecCCchhhccc-HHHHHHHHHHHcCCCH-----
Confidence 00 112444332 22222111000010 00 00000000 000011111111 0134568899999998
Q ss_pred cccccEEEEcCCCHHHHHHHHHHcCCCHHHHHHhhh---hhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHH
Q 038123 406 KQAFEHICILATSKKVLDEIQKNLELTEELMEASRK---TLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGV 482 (508)
Q Consensus 406 ~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~---tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~ 482 (508)
+|||+|-+|+........+.+.+|++.+++.++-. .-|-+|++|+..+...+.++.++| .+.| .+.+++.| |.
T Consensus 333 -~DID~~ei~eaFa~~~l~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g-~~~G-l~~~c~~G-G~ 408 (417)
T PRK06025 333 -DDIDLWEINEAFAVVAEKFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELERRG-LKRG-LVTMCAAG-GM 408 (417)
T ss_pred -HHCcEEEEchHHHHHHHHHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHHhC-CCeE-EEEEEeec-cc
Confidence 99999999999998888999999999988754322 225799999999999888888776 6777 44444444 32
Q ss_pred hhhheeEE
Q 038123 483 KCNSVVWK 490 (508)
Q Consensus 483 ~~~sav~r 490 (508)
. .+++++
T Consensus 409 g-~A~lle 415 (417)
T PRK06025 409 A-PAIIIE 415 (417)
T ss_pred e-eEEEEE
Confidence 2 345554
No 72
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.34 E-value=7.2e-11 Score=125.90 Aligned_cols=312 Identities=14% Similarity=0.086 Sum_probs=181.2
Q ss_pred hcCCCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccC------CC---CC
Q 038123 110 ETTPCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFC------PG---YR 180 (508)
Q Consensus 110 ~~~~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~------~~---~~ 180 (508)
|++ ++|.|+|+|+-.|.. .+.+++.+.+.. | ++||++...++.+... ++ +.
T Consensus 1 m~~-~~VvItG~g~~~p~g---~~~~~~w~~L~~-g---------------~s~i~~~~~~~~~~~~~~~~g~i~~~~~~ 60 (414)
T PRK08722 1 MSK-RRVVVTGMGMLSPVG---NTVESSWKALLA-G---------------QSGIVNIEHFDTTNFSTRFAGLVKDFNCE 60 (414)
T ss_pred CCC-CCEEEEeeEEECCCC---CCHHHHHHHHHh-C---------------CCeeeecCccccccCCCceeEEcCCCChh
Confidence 343 689999999999984 788888887642 1 1222211111000000 00 00
Q ss_pred C--CccchH--HHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccC-C-----------------C--------CCC
Q 038123 181 P--NLKDGR--EEAAMVLFGAIDDLLAATKIRPKDIR----VLVVNCGV-L-----------------N--------TTP 226 (508)
Q Consensus 181 ~--~~~~~~--~ea~~la~~Aa~~aL~~agi~p~dId----~LI~~~s~-~-----------------~--------~~P 226 (508)
. +-+..+ .....++..|+.++|+++|+++++.+ .++++++. . . ..|
T Consensus 61 ~~~~~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (414)
T PRK08722 61 EYMSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIV 140 (414)
T ss_pred HcCCHHHHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccc
Confidence 0 001111 23557889999999999999754432 24444421 0 0 112
Q ss_pred -chHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------C--------
Q 038123 227 -SLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTW----------Y-------- 287 (508)
Q Consensus 227 -s~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~----------~-------- 287 (508)
..+..|...+|++ -+++.++ .+|++++.||..|.++|+.|..+.+||+++|.....+ .
T Consensus 141 n~~a~~is~~~gl~--Gp~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~ 217 (414)
T PRK08722 141 NMIAGNLSIMRGLR--GPNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQ 217 (414)
T ss_pred cHHHHHHHHHhCCC--CCccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCc
Confidence 3678899999997 5889999 5999999999999999999999999999999743200 0
Q ss_pred ---CCCCccccccccccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHh
Q 038123 288 ---GGNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEV 363 (508)
Q Consensus 288 ---~~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~ 363 (508)
.+.|+.. ...+.|||++++||++.+...++ +-++.. +......+|+.. ++. |..
T Consensus 218 ~~~rpfd~~~--~G~~~gEGaaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~-----------------~~~--p~~ 275 (414)
T PRK08722 218 KASRPWDKDR--DGFVLGDGAGMMVLEEYEHAKAR-GAKIYAELVGFGMSGDAYH-----------------MTS--PSE 275 (414)
T ss_pred cccCcCcCCC--CceEeeceEEEEEEccHHHHHHC-CCeEEEEEEEEEEcCCCCC-----------------CCC--CCc
Confidence 1112111 35778999999999976532111 111111 112222222110 100 100
Q ss_pred hhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCC-HHHHH
Q 038123 364 GGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELT-EELME 437 (508)
Q Consensus 364 ~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~-~e~~~ 437 (508)
.+.. ..+.+.++++++|+++ +|||++..|..+...-|.+ .+.+|-. .+++.
T Consensus 276 ~~~~-----------------~~~a~~~Al~~agi~~------~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~ 332 (414)
T PRK08722 276 DGSG-----------------GALAMEAAMRDAGVTG------EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVL 332 (414)
T ss_pred chHH-----------------HHHHHHHHHHHcCCCH------HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCce
Confidence 1110 0123457888999998 9999999999887665544 4455521 12221
Q ss_pred HhhhhhcccCccccchHHHHHHHH---HHhCCCC-------------------------CCCEEEEEeechHHhhhheeE
Q 038123 438 ASRKTLERFGNTSSSSVWYELAYL---EANAGVK-------------------------RGDRIWQTAFGSGVKCNSVVW 489 (508)
Q Consensus 438 ~s~~tl~r~GNtsSaSi~~~La~~---~~~gri~-------------------------~Gd~vlliafGsG~~~~sav~ 489 (508)
--.+=..+||+.+++-..++... +++|.+. +-++++.-+||-|-.-.++|+
T Consensus 333 -v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl 411 (414)
T PRK08722 333 -VSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIF 411 (414)
T ss_pred -eeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEE
Confidence 01333568999999887777532 3333211 124566667787766666666
Q ss_pred E
Q 038123 490 K 490 (508)
Q Consensus 490 r 490 (508)
+
T Consensus 412 ~ 412 (414)
T PRK08722 412 K 412 (414)
T ss_pred e
Confidence 5
No 73
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=7e-11 Score=125.07 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCC-CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNT-TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~-~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|+.+++||.+|++++ +... .+.++.+++..+|++..+++++++ .+|++|+.|+..|...++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 5899999999999999988899999999864 3333 367777899999998569999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 038123 268 AYPGSYALVVSTEVVS 283 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S 283 (508)
+|..+.+||+++|.+|
T Consensus 106 sG~~d~vLv~G~E~ms 121 (391)
T PRK07661 106 LGHSEAVIAGGAESMS 121 (391)
T ss_pred cCCCCEEEEEEEeecc
Confidence 9999999999999876
No 74
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.32 E-value=5.4e-11 Score=126.71 Aligned_cols=250 Identities=16% Similarity=0.146 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCccEEEEecc----------------CCCCCC---------chHHHHHHHcCCCCC
Q 038123 190 AAMVLFGAIDDLLAATKIR---PKDIRVLVVNCG----------------VLNTTP---------SLSAMVINHYKLRHN 241 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~---p~dId~LI~~~s----------------~~~~~P---------s~a~~v~~~lgl~~~ 241 (508)
...++..|++++|+++|++ +++|++++.++. +....| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 6789999999999999986 456776664432 111112 2567788999996
Q ss_pred ceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCCC----------------------CCCCCCccccccc
Q 038123 242 INSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEV-VSNT----------------------WYGGNEVDMLLPN 298 (508)
Q Consensus 242 ~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~~----------------------~~~~~dr~~lv~~ 298 (508)
.+++.+++ +|++++.||..|.++|++|..+.|||+++|. ++.. ...+.|+.. ..
T Consensus 158 G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--dG 234 (410)
T PRK07103 158 GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--DG 234 (410)
T ss_pred CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC--CC
Confidence 47888995 9999999999999999999999999999863 2210 001112211 35
Q ss_pred cccccceEEEEEeeCCCCccccccce-eeEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccC
Q 038123 299 CFFRMGAAAVLLSSCRLDKWRSKYEF-KQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGP 377 (508)
Q Consensus 299 ~lfgDGAaAvLLs~~~~~~~~~~~~L-~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~ 377 (508)
.++||||+|+||++.+...++. -++ ..+......+|+.. .. -|...+ .
T Consensus 235 ~v~gEGaaalvLe~~~~A~~~g-~~i~a~I~g~~~~~d~~~-----------------~~--~p~~~~--~--------- 283 (410)
T PRK07103 235 FIYGEACGAVVLESAESARRRG-ARPYAKLLGWSMRLDANR-----------------GP--DPSLEG--E--------- 283 (410)
T ss_pred eeEeeeEEEEEEccHHHHHHCC-CceEEEEEEEEEecCCCC-----------------CC--CCCHHH--H---------
Confidence 7899999999999765321111 111 11222222222211 00 010000 0
Q ss_pred cccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHH-H-cCCCHHHHHHhhhhhcccCccccchHH
Q 038123 378 LVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQK-N-LELTEELMEASRKTLERFGNTSSSSVW 455 (508)
Q Consensus 378 ~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~-~-Lgl~~e~~~~s~~tl~r~GNtsSaSi~ 455 (508)
.+.+.++++++|+.+ +|||++..|..+...-|..+- . ++....++ +--.+-..+||+.+++-.
T Consensus 284 --------~~a~~~Al~~Agi~~------~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~-~v~s~k~~~Gh~~~AsG~ 348 (410)
T PRK07103 284 --------MRVIRAALRRAGLGP------EDIDYVNPHGTGSPLGDETELAALFASGLAHA-WINATKSLTGHGLSAAGI 348 (410)
T ss_pred --------HHHHHHHHHHcCCCH------HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCC-eEECCCcccccCchhhhH
Confidence 123447888999998 999999999988876554432 1 22111111 001233457999999888
Q ss_pred HHHHHH---HHhCCCC-----------------------CCCEEEEEeechHHhhhheeEE
Q 038123 456 YELAYL---EANAGVK-----------------------RGDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 456 ~~La~~---~~~gri~-----------------------~Gd~vlliafGsG~~~~sav~r 490 (508)
++|... ++.|.+. +-.+++..+||-|-.-.++|++
T Consensus 349 ~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 349 VELIATLLQMRAGFLHPSRNLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred HHHHHHHHHHhCCeeCCCCCCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 877643 3333321 1245667778877666666654
No 75
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.32 E-value=3.9e-11 Score=128.10 Aligned_cols=253 Identities=17% Similarity=0.126 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCc-c----EEEEeccCC----------------------C----CCC-chHHHHHHHc
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDI-R----VLVVNCGVL----------------------N----TTP-SLSAMVINHY 236 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dI-d----~LI~~~s~~----------------------~----~~P-s~a~~v~~~l 236 (508)
....++..|++++|+++|++++++ + .++++++.. . ..+ ..+..|...|
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 366789999999999999987766 2 455554311 0 111 2366788999
Q ss_pred CCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC----------CC------------CCCCccc
Q 038123 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT----------WY------------GGNEVDM 294 (508)
Q Consensus 237 gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~----------~~------------~~~dr~~ 294 (508)
|++ .+++.++ .+|++++.||..|.++|++|..+.+||+++|..... .+ .+.|+..
T Consensus 161 gl~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~ 237 (424)
T PRK06333 161 GFK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR 237 (424)
T ss_pred CCC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC
Confidence 996 6788899 599999999999999999999999999999973210 00 0111111
Q ss_pred cccccccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHH
Q 038123 295 LLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANIT 373 (508)
Q Consensus 295 lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~ 373 (508)
...+.||||+++||++.+...++ +.++.. +......+|+.. ++. +...+..
T Consensus 238 --~G~~~gEGaa~lvLe~~~~A~~r-g~~i~a~i~G~~~~~d~~~-----------------~~~--~~~~~~~------ 289 (424)
T PRK06333 238 --DGFVMGEGAGILVIETLEHALAR-GAPPLAELVGYGTSADAYH-----------------MTA--GPEDGEG------ 289 (424)
T ss_pred --CCeEEecceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC-----------------CCC--CCCCcHH------
Confidence 24678999999999985432111 112211 111111222110 000 0001111
Q ss_pred hccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHH-----HHHHHcCCCHHHHHHhhhhhcccCc
Q 038123 374 TLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLD-----EIQKNLELTEELMEASRKTLERFGN 448 (508)
Q Consensus 374 ~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld-----~v~~~Lgl~~e~~~~s~~tl~r~GN 448 (508)
+.+.+..+++++++++ +|||++..|..+...-| .+.+.++ ....+.. ..+...+||
T Consensus 290 -----------~~~a~~~Al~~Agi~p------~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v-~s~K~~~GH 350 (424)
T PRK06333 290 -----------ARRAMLIALRQAGIPP------EEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAV-SSTKSATGH 350 (424)
T ss_pred -----------HHHHHHHHHHHcCCCH------HHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCcee-ECcccchhh
Confidence 1123457888999998 99999999998876543 3455665 1112211 244567899
Q ss_pred cccchHHHHHHH---HHHhCCC-------------------------CCCCEEEEEeechHHhhhheeEEE
Q 038123 449 TSSSSVWYELAY---LEANAGV-------------------------KRGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 449 tsSaSi~~~La~---~~~~gri-------------------------~~Gd~vlliafGsG~~~~sav~r~ 491 (508)
+.+|+-..++.. .++.|.+ .+-++++.-+||.|-...+++++.
T Consensus 351 ~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 351 LLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred hHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 887775554443 2333321 123456777899887777777654
No 76
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.27 E-value=3.7e-10 Score=114.48 Aligned_cols=116 Identities=20% Similarity=0.263 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
-.+|+.+|+++||+++|++++|||.+++++......|+ ..++++||++ .+++.+ +||++..||.+|..++++|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcC
Confidence 46799999999999999999999999999877666666 4899999954 599995 9999999999999999999
Q ss_pred CCCeEEEEEeccCC---CCCCC----CCCccccccccccccceEEEEEeeCC
Q 038123 270 PGSYALVVSTEVVS---NTWYG----GNEVDMLLPNCFFRMGAAAVLLSSCR 314 (508)
Q Consensus 270 ~~~~aLVVs~E~~S---~~~~~----~~dr~~lv~~~lfgDGAaAvLLs~~~ 314 (508)
..++||++++-... +.|.. ++.|.. +...---||+|+||++..
T Consensus 127 ~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 127 GAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 99999999876543 12322 233432 344455789999999764
No 77
>PRK06158 thiolase; Provisional
Probab=99.27 E-value=2.7e-10 Score=120.41 Aligned_cols=87 Identities=18% Similarity=0.022 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|+.+|++++|+++|++++|||.+|+++. +...|+ ..+++++|++ +.+.+++. .||+++..++..|..+|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 5799999999999999999999999998763 333444 5799999997 57888998 59999999999999999999
Q ss_pred CCCeEEEE-Eecc
Q 038123 270 PGSYALVV-STEV 281 (508)
Q Consensus 270 ~~~~aLVV-s~E~ 281 (508)
..++|||+ +.|.
T Consensus 103 ~~d~vLV~~g~~~ 115 (384)
T PRK06158 103 LCDVALICYGSNQ 115 (384)
T ss_pred CCCEEEEeecccc
Confidence 99999998 4443
No 78
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=3.6e-10 Score=118.33 Aligned_cols=245 Identities=15% Similarity=0.125 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
+.+|+..|++++++ |++ ++||.+|+++.... .+..+..+....|++.+++++.++ .+|++++.|+..|.+++++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 68999999999865 896 89999999865321 244455688999998679999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCCCC-----------CCCC---------------CCcc------------------------------
Q 038123 270 PGSYALVVSTEVVSNT-----------WYGG---------------NEVD------------------------------ 293 (508)
Q Consensus 270 ~~~~aLVVs~E~~S~~-----------~~~~---------------~dr~------------------------------ 293 (508)
..+.+|++++|.+|.. ++.. -.|.
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999988741 1100 0000
Q ss_pred ---------------------cc---------ccccccccceEEEEEeeCCCCcccccccee-eEEeeeeccCCccccce
Q 038123 294 ---------------------ML---------LPNCFFRMGAAAVLLSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCM 342 (508)
Q Consensus 294 ---------------------~l---------v~~~lfgDGAaAvLLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~ 342 (508)
.. ..+|..+|||+|+||.+.+.-++. +.+.. .++.....+.+
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~l-g~~p~~~i~~~~~~~~~------ 252 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKL-GYKPVLRFVRSAVVGVD------ 252 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHc-CCCceEEEEEEEEeccC------
Confidence 00 011334688888888765421100 00000 11111000000
Q ss_pred eeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHH
Q 038123 343 HLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVL 422 (508)
Q Consensus 343 ~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vl 422 (508)
...+.. .....+.++++++|+++ +|||+|.+|+......
T Consensus 253 ---------------~~~~~~--------------------~~~~a~~~al~~Agl~~------~Did~~ei~eafa~~~ 291 (361)
T PRK06690 253 ---------------PNLPGT--------------------GPIFAVNKLLNEMNMKV------EDIDYFEINEAFASKV 291 (361)
T ss_pred ---------------cccchh--------------------HHHHHHHHHHHHcCCCH------HHcCEeeecchhHHHH
Confidence 000000 00123457889999998 9999999999999999
Q ss_pred HHHHHHcCCCHHHHHHh---hhhhcccCccccchHHHHHHHHHHhCCCCCCCE-EEEEeechHHhhhheeEEEe
Q 038123 423 DEIQKNLELTEELMEAS---RKTLERFGNTSSSSVWYELAYLEANAGVKRGDR-IWQTAFGSGVKCNSVVWKAL 492 (508)
Q Consensus 423 d~v~~~Lgl~~e~~~~s---~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~-vlliafGsG~~~~sav~r~~ 492 (508)
....+.||++++++.++ ....|.+|+|++..++..+.++.++| |.+ +..+..|.|.. .+++|+.+
T Consensus 292 ~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~----~~~g~~~~c~~gG~g-~a~~~e~~ 360 (361)
T PRK06690 292 VACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED----MKYGIATLGIGGGIG-LALLFEKV 360 (361)
T ss_pred HHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC----CCEEEEEEcccCcce-eEEEEEec
Confidence 99999999998877421 12268899999999998888887543 222 33344444432 35566543
No 79
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.26 E-value=2.8e-10 Score=122.46 Aligned_cols=93 Identities=13% Similarity=0.142 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCc-hHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPS-LSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps-~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++++|||.+|+++. .....+. .+.++...+|++..+++++++ .+|++|+.|+..|...|+
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~ 149 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 149 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHH
Confidence 6899999999999999999999999998764 4443343 345666778998569999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 038123 268 AYPGSYALVVSTEVVS 283 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S 283 (508)
+|..+.|||++.|.+|
T Consensus 150 sG~~dvvLv~GvE~mS 165 (452)
T PLN02287 150 AGFYDIGIGAGVESMT 165 (452)
T ss_pred cCCCCeEEEEeEEecC
Confidence 9999999999999765
No 80
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.25 E-value=4.1e-10 Score=118.84 Aligned_cols=302 Identities=14% Similarity=0.122 Sum_probs=177.5
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMV 193 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 193 (508)
++|.|.|+|..-|-. . .+++.+.+.. | ++||+.-+-++. ....+.. .......+...+
T Consensus 2 ~rVvITG~G~vsp~G---~-~~~~~~~l~~-G---------------~sgi~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 59 (381)
T PRK05952 2 MKVVVTGIGLVSALG---D-LEQSWQRLLQ-G---------------KSGIKLHQPFPE-LPPLPLG-LIGNQPSSLEDL 59 (381)
T ss_pred CeEEEEeeEEECccc---C-HHHHHHHHHc-C---------------CCCeEeCCcccc-cccccce-eeccccccccHH
Confidence 369999999999983 4 7888876542 1 244442111100 0000000 000000012235
Q ss_pred HHHHHHHHHHhCCCCC--CCccEEEEeccCC-----------------------------CCCC-chHHHHHHHcCCCCC
Q 038123 194 LFGAIDDLLAATKIRP--KDIRVLVVNCGVL-----------------------------NTTP-SLSAMVINHYKLRHN 241 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p--~dId~LI~~~s~~-----------------------------~~~P-s~a~~v~~~lgl~~~ 241 (508)
+..|++++|+++|+++ +++++++ +|+.. ...| ..+..+...+|++
T Consensus 60 ~~~a~~~Al~dagl~~~~~~~Gv~~-Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~-- 136 (381)
T PRK05952 60 TKTVVTAALKDAGLTPPLTDCGVVI-GSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ-- 136 (381)
T ss_pred HHHHHHHHHHhcCCCCCCCCEEEEE-eeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC--
Confidence 6689999999999964 4565554 43210 0122 2467789999997
Q ss_pred ceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCCC----C----------CCCCCccccccccccccceE
Q 038123 242 INSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEV-VSNT----W----------YGGNEVDMLLPNCFFRMGAA 306 (508)
Q Consensus 242 ~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~~----~----------~~~~dr~~lv~~~lfgDGAa 306 (508)
-+++.+. .+|++++.||..|.++|+.|..+.+||.++|. ++.. + ..+-|+.. ...++||||+
T Consensus 137 Gp~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r--~G~v~gEGaa 213 (381)
T PRK05952 137 GPVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR--EGLVLGEGGA 213 (381)
T ss_pred Ccccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC--CCccccccEE
Confidence 4789999 59999999999999999999999999999996 4320 0 01112211 3578999999
Q ss_pred EEEEeeCCCCcccccccee-eEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhH
Q 038123 307 AVLLSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQ 385 (508)
Q Consensus 307 AvLLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~ 385 (508)
++||++.+...++. -++. .+......+|+.. .+ .|...++..
T Consensus 214 ~lvLe~~~~A~~rg-~~i~a~I~g~~~~~d~~~-----------------~~--~~~~~~~~~----------------- 256 (381)
T PRK05952 214 ILVLESAELAQKRG-AKIYGQILGFGLTCDAYH-----------------MS--APEPDGKSA----------------- 256 (381)
T ss_pred EEEEeeHHHHHhCC-CceEEEEEEEEecCCCCC-----------------CC--CCCCCHHHH-----------------
Confidence 99999864321111 1111 1111222222211 00 011111111
Q ss_pred HHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCHHHHHHhhhhhcccCccccchHHHHHHH
Q 038123 386 VHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTEELMEASRKTLERFGNTSSSSVWYELAY 460 (508)
Q Consensus 386 ~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~ 460 (508)
.+.+.++|+++++.+ +|||++..|..+...-|.. .+.++-. -.+ ..+-..+||+.+|+-.+++..
T Consensus 257 ~~ai~~Al~~agi~p------~dId~i~~hgtgt~~~D~~E~~al~~~fg~~-~~v---~s~K~~~GH~~~AaG~~~~~~ 326 (381)
T PRK05952 257 IAAIQQCLARSGLTP------EDIDYIHAHGTATRLNDQREANLIQALFPHR-VAV---SSTKGATGHTLGASGALGVAF 326 (381)
T ss_pred HHHHHHHHHHhCCCH------HHeeEEEccCCCCCCCcHHHHHHHHHHcCCC-Cee---ecchhhhccChHHHHHHHHHH
Confidence 123456888999998 9999999999887766554 3444411 011 133356999999998777765
Q ss_pred H---HHhCCCCC---------------------CCEEEEEeechHHhhhheeEE
Q 038123 461 L---EANAGVKR---------------------GDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 461 ~---~~~gri~~---------------------Gd~vlliafGsG~~~~sav~r 490 (508)
+ +++|.+.+ =++++..+||-|-.-.++|++
T Consensus 327 ~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 327 SLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 4 34444432 246778888888766666664
No 81
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=5.7e-10 Score=118.15 Aligned_cols=91 Identities=12% Similarity=0.034 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC--CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNT--TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~--~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++. .||+++..++..|..+++
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHh
Confidence 57899999999999999999999999987643322 466788899999997 58899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccC
Q 038123 268 AYPGSYALVVSTEVV 282 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~ 282 (508)
+|..++||||++|+.
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999974
No 82
>PRK08256 lipid-transfer protein; Provisional
Probab=99.22 E-value=3.7e-10 Score=119.57 Aligned_cols=90 Identities=19% Similarity=0.158 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|+.+|++++|+++|++++|||.+++++....... ...+...+|++ ++++++++ .+|++++.+|..|.++|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHCC
Confidence 5799999999999999999999999987754221111 23467789996 68889999 69999999999999999999
Q ss_pred CCCeEEEEEeccCC
Q 038123 270 PGSYALVVSTEVVS 283 (508)
Q Consensus 270 ~~~~aLVVs~E~~S 283 (508)
..++|||+++|..|
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999765
No 83
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=4.1e-10 Score=119.85 Aligned_cols=92 Identities=17% Similarity=0.218 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCccEEEEecc-CC-CCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAAT-KIRPKDIRVLVVNCG-VL-NTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~a-gi~p~dId~LI~~~s-~~-~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
..+|+.+|++++|+++ |++|+|||.+|+++. +. ...+..+..++..+|++ +++++.++ .+|+++..++..|.+++
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 6899999999999996 999999999998753 22 22356678899999996 69999999 59999999999999999
Q ss_pred HcCCCCeEEEEEeccCC
Q 038123 267 NAYPGSYALVVSTEVVS 283 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S 283 (508)
++|..+.|||+++|..|
T Consensus 105 ~sG~~d~vLv~G~e~~s 121 (406)
T PRK07851 105 KAGEGDVFISAGVETVS 121 (406)
T ss_pred HCCCCCEEEEeeEEecc
Confidence 99999999999999754
No 84
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.22 E-value=5.5e-10 Score=118.44 Aligned_cols=93 Identities=15% Similarity=0.075 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL-NTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~-~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..+...+|++.+++++.++ .+|+++..++..|.+.|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999876421 11234455688999997668999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCC
Q 038123 269 YPGSYALVVSTEVVS 283 (508)
Q Consensus 269 g~~~~aLVVs~E~~S 283 (508)
|..+.|||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988764
No 85
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=5.7e-10 Score=118.10 Aligned_cols=92 Identities=18% Similarity=0.140 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CC--CCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LN--TTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~--~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
..+|+.+|++++|+++|++++|||.+|++++. .. ..+..+..+...+|++ ++++++++ ++|++++.||.+|..++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987642 11 1111122334456776 78999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCC
Q 038123 267 NAYPGSYALVVSTEVVS 283 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S 283 (508)
++|..++|||+++|..|
T Consensus 100 ~sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 100 EAGRARIVLVVGAEKMT 116 (389)
T ss_pred HCCCCCEEEEEEehhhc
Confidence 99999999999999854
No 86
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=4.9e-10 Score=118.58 Aligned_cols=94 Identities=16% Similarity=0.257 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+..|++++|+++|++|++||.+|+++.. ...-+..+.++....|++.+++++.++ .+|++|+.|+..|..++++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999998642 222346677788999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998874
No 87
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=1.1e-09 Score=115.71 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNT-TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~-~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+.+|+.+|++++|+++|++|++||.++++|.. ... ....+..+....|++.+++++.++ ++|++|+.|+.+|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 68999999999999999999999999998753 222 234566777889998679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999874
No 88
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.19 E-value=2e-09 Score=114.58 Aligned_cols=315 Identities=12% Similarity=0.058 Sum_probs=177.7
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccc--hHHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKD--GREEAA 191 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~--~~~ea~ 191 (508)
++|.|+|+|+-.|-. .+.+++.+.+.. |. .-++...+...-.++..+....-..+..+....-+. ......
T Consensus 2 ~~VvITG~g~vtp~G---~~~~~~~~~L~~-g~---s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTALG---EDWQTIAARLKA-GR---NAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CC---CCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 479999999999984 788999887643 11 000000000000122111111000000000000000 112356
Q ss_pred HHHHHHHHHHHHhCCCCC------CCccEEEEeccCC--------------------------CCCCc-hHHHHHHHcCC
Q 038123 192 MVLFGAIDDLLAATKIRP------KDIRVLVVNCGVL--------------------------NTTPS-LSAMVINHYKL 238 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p------~dId~LI~~~s~~--------------------------~~~Ps-~a~~v~~~lgl 238 (508)
.++..|++++|+++|++. +++++ +++++.. ..+|+ .+..|...+|+
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~Gv-~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRMGI-AYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcEEE-EEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 789999999999999842 23444 4443210 01232 57889999999
Q ss_pred CCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC--------------------CCCCCCccccccc
Q 038123 239 RHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT--------------------WYGGNEVDMLLPN 298 (508)
Q Consensus 239 ~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~--------------------~~~~~dr~~lv~~ 298 (508)
+ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|.++.. ...+.|+.. ..
T Consensus 154 ~--Gp~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 K--GRVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred C--CCccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 7 5889999 499999999999999999999999999999975420 001112211 35
Q ss_pred cccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccC
Q 038123 299 CFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGP 377 (508)
Q Consensus 299 ~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~ 377 (508)
.+.|+||+++||++.+....+ +-++.. +......+|+. ++.. |. .+.
T Consensus 229 ~v~gEGa~~~vLe~~~~A~~r-ga~i~a~i~g~~~~~d~~-----------------~~~~--p~--~~~---------- 276 (405)
T PRK09116 229 LVIGEGAGTLVLEELEHAKAR-GATIYAEIVGFGTNSDGA-----------------HVTQ--PQ--AET---------- 276 (405)
T ss_pred EeeeccEEEEEEccHHHHHhC-CCceEEEEEEEEEcCCCC-----------------cCCC--CC--HHH----------
Confidence 788999999999975432111 111111 11111122211 0100 00 000
Q ss_pred cccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHH-----HHHHHcCCCHHHHHHhhhhhcccCccccc
Q 038123 378 LVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLD-----EIQKNLELTEELMEASRKTLERFGNTSSS 452 (508)
Q Consensus 378 ~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld-----~v~~~Lgl~~e~~~~s~~tl~r~GNtsSa 452 (508)
+.+.+.++|+++++++ +|||++..|..+...-| .+.+.+|-. -.+ ..+-..+||+..+
T Consensus 277 -------~~~ai~~AL~~Agi~p------~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~~-~pv---~s~K~~~GH~~~A 339 (405)
T PRK09116 277 -------MQIAMELALKDAGLAP------EDIGYVNAHGTATDRGDIAESQATAAVFGAR-MPI---SSLKSYFGHTLGA 339 (405)
T ss_pred -------HHHHHHHHHHHhCCCH------HHcCEEECcCccCCCCCHHHHHHHHHHhCCC-Cee---ECcchhhcccHHH
Confidence 1123457888999998 99999999987665433 445566521 112 2344568999877
Q ss_pred hHHHHHHHH---HHhCCCC-------------------------CCCEEEEEeechHHhhhheeEE
Q 038123 453 SVWYELAYL---EANAGVK-------------------------RGDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 453 Si~~~La~~---~~~gri~-------------------------~Gd~vlliafGsG~~~~sav~r 490 (508)
+-.+++... ++.|.+. +.+.++..+||-|-.-.++|++
T Consensus 340 aG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 340 CGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred HHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 766655432 2222221 2346778888888766666653
No 89
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.19 E-value=3.1e-09 Score=112.62 Aligned_cols=208 Identities=15% Similarity=0.058 Sum_probs=132.8
Q ss_pred CchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC--------------CCCCCC
Q 038123 226 PSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT--------------WYGGNE 291 (508)
Q Consensus 226 Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~--------------~~~~~d 291 (508)
+..+..|+..+|++ -+++.++ .+|++++.||..|.++|++|..+.|||+++|..+.. +..+.|
T Consensus 137 ~~~a~~ia~~lgl~--Gp~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLS--GPAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCC--CCccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 35688899999997 3889999 599999999999999999999999999999965421 001112
Q ss_pred ccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhh
Q 038123 292 VDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKAN 371 (508)
Q Consensus 292 r~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~ 371 (508)
+.. ...++||||+++||++.+.. .-++.+ .....|+.. ++. +...+...
T Consensus 214 ~~~--~G~~~gEGaa~vVLe~~~~~----~~~I~g---~g~~~d~~~-----------------~~~--~~~~~~~~--- 262 (392)
T PRK09185 214 ANR--DGINIGEAAAFFLLEREDDA----AVALLG---VGESSDAHH-----------------MSA--PHPEGLGA--- 262 (392)
T ss_pred CCC--CccceeceEEEEEEEEcCCC----cEEEEE---EEEeCCCCC-----------------CCC--CCCCHHHH---
Confidence 111 25789999999999987321 122222 222222211 000 00011111
Q ss_pred HHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCHHHHHHhhhhhccc
Q 038123 372 ITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTEELMEASRKTLERF 446 (508)
Q Consensus 372 i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~e~~~~s~~tl~r~ 446 (508)
.+.+.++++++++.+ +|||++..|..+...-|.. .+.++-.. .+ -.+=..+
T Consensus 263 --------------~~a~~~Al~~Agl~~------~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv---~s~K~~~ 318 (392)
T PRK09185 263 --------------ILAMQQALADAGLAP------ADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC---SSTKGLT 318 (392)
T ss_pred --------------HHHHHHHHHHcCCCH------HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce---eCCCccc
Confidence 123457888999998 9999999999887654443 34454211 12 1333558
Q ss_pred CccccchHHHHHHHHH---HhCCCC------------------------CCCEEEEEeechHHhhhheeEEE
Q 038123 447 GNTSSSSVWYELAYLE---ANAGVK------------------------RGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 447 GNtsSaSi~~~La~~~---~~gri~------------------------~Gd~vlliafGsG~~~~sav~r~ 491 (508)
||+.+++-.+++.... +.|.+. +-++++..+||-|-.-.+++++.
T Consensus 319 Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 319 GHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred ccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 9999999777776533 232211 13567788888887777777753
No 90
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.19 E-value=1.6e-09 Score=118.88 Aligned_cols=314 Identities=15% Similarity=0.115 Sum_probs=180.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCC--CChhhHHHHHHHHHHhCCcceee--c---CCCccCCCCCCCccch
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGN--FNDASLEFKQRIIKNSGLGDETY--L---PRAVFCPGYRPNLKDG 186 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~--~---~~~~~~~~~~~~~~~~ 186 (508)
++|.|+|+|+..|-. .+.++|.+.+.. |. +.+-. +| ....+..+.. . .+..+ .+ +.....
T Consensus 129 ~rVvITG~G~vtp~G---~~~~~~w~~L~~-G~s~i~~~~-~f-----~~~~~~~~~ag~i~~f~~~~~-l~--~k~~r~ 195 (540)
T PLN02787 129 RRVVVTGMGVVSPLG---HDPDVFYNNLLE-GVSGISEIE-RF-----DCSQFPTRIAGEIKSFSTDGW-VA--PKLSKR 195 (540)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CCCcccccC-cc-----chhhCCccccccccccChhhc-CC--HHHHHh
Confidence 589999999999984 788888887642 11 01000 00 0011111100 0 00000 00 000011
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCC--------CccEEEEeccCC-------------------CC------CC-chHHHH
Q 038123 187 REEAAMVLFGAIDDLLAATKIRPK--------DIRVLVVNCGVL-------------------NT------TP-SLSAMV 232 (508)
Q Consensus 187 ~~ea~~la~~Aa~~aL~~agi~p~--------dId~LI~~~s~~-------------------~~------~P-s~a~~v 232 (508)
......++..|++++|+++|++++ .++ |+++++.. .+ ++ ..+.+|
T Consensus 196 md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 274 (540)
T PLN02787 196 MDKFMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAML 274 (540)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHH
Confidence 123557889999999999998764 233 44444310 00 11 236788
Q ss_pred HHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC--------------C------CCCCCC
Q 038123 233 INHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVV-SN--------------T------WYGGNE 291 (508)
Q Consensus 233 ~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~--------------~------~~~~~d 291 (508)
...+|++ .+.+.++ .+|++++.||..|.++|+.|..+.+||.++|.. +. . ...+-|
T Consensus 275 a~~~gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD 351 (540)
T PLN02787 275 AMDLGWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWD 351 (540)
T ss_pred HHHhCCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcc
Confidence 9999997 5789999 599999999999999999999999999999962 21 0 001122
Q ss_pred ccccccccccccceEEEEEeeCCCCccccccceeeEE-eeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhh
Q 038123 292 VDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLV-RTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKA 370 (508)
Q Consensus 292 r~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~ 370 (508)
+.. ...++|+||+++||++.+...++ +-++...+ ......|+ |. +.. |...+..
T Consensus 352 ~~r--dGfv~GEGAa~lVLE~~e~A~~r-Ga~IyA~I~G~g~s~Da--~~-~t~----------------p~p~g~g--- 406 (540)
T PLN02787 352 MNR--DGFVMGEGAGVLLLEELEHAKKR-GANIYAEFLGGSFTCDA--YH-MTE----------------PHPEGAG--- 406 (540)
T ss_pred cCC--CCcccccceEEEEEeeHHHHHHC-CCeeEEEEEEEEEecCC--CC-CCC----------------CCcCHHH---
Confidence 211 35789999999999975432111 11222111 11112222 10 000 1111111
Q ss_pred hHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCHHHHHHhhhhhcc
Q 038123 371 NITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTEELMEASRKTLER 445 (508)
Q Consensus 371 ~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~e~~~~s~~tl~r 445 (508)
+.+.+.++|+++|+++ +|||++..|..+...-|. +.+.+|-.+ .+. -..+=..
T Consensus 407 --------------~~~am~~AL~~AGl~p------~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~p-V~S~Ks~ 464 (540)
T PLN02787 407 --------------VILCIEKALAQSGVSK------EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELR-VNSTKSM 464 (540)
T ss_pred --------------HHHHHHHHHHHcCCCH------HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cce-eeCCCCC
Confidence 1123557889999998 999999999988766544 345565321 110 0134456
Q ss_pred cCccccchHHHHHHHH---HHhCCCCC-------------------------CCEEEEEeechHHhhhheeEEE
Q 038123 446 FGNTSSSSVWYELAYL---EANAGVKR-------------------------GDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 446 ~GNtsSaSi~~~La~~---~~~gri~~-------------------------Gd~vlliafGsG~~~~sav~r~ 491 (508)
+||+.+|+-.+++... +++|.+.| -+.++.-+||-|-.-.++|++.
T Consensus 465 iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 465 IGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred cCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 9999988876666543 33433221 1345667788777777777664
No 91
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.19 E-value=9.9e-10 Score=117.68 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC-CCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLN-TTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~-~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|++||.+|+++.... ..+.++.++...+|++..++++.++ ++|++++.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999999875322 2355677799999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+.|||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999998874
No 92
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.18 E-value=2e-09 Score=114.55 Aligned_cols=305 Identities=14% Similarity=0.104 Sum_probs=177.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCC--------cc-CCCCCC--C
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRA--------VF-CPGYRP--N 182 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~--------~~-~~~~~~--~ 182 (508)
++|.|+|+|+..|-. .+.+++.+.+.. | ++||++-...+.. .. ...+.. +
T Consensus 2 ~~v~ItG~g~vsp~G---~~~~~~~~~L~~-G---------------~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~~~ 62 (406)
T PRK08439 2 KRVVVTGIGMINSLG---LNKESSFKAICN-G---------------ECGIKKITLFDASDFPVQIAGEITDFDPTEVMD 62 (406)
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHc-C---------------CCceEeCCCccccCCCCceeEEcCCcChhhcCC
Confidence 469999999999984 788888887643 1 1222211000000 00 000000 0
Q ss_pred ccc--hHHHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC--------------------------CCCC-chH
Q 038123 183 LKD--GREEAAMVLFGAIDDLLAATKIRPKDIR----VLVVNCGVL--------------------------NTTP-SLS 229 (508)
Q Consensus 183 ~~~--~~~ea~~la~~Aa~~aL~~agi~p~dId----~LI~~~s~~--------------------------~~~P-s~a 229 (508)
.+. .......++..|+.++|+++|+++++++ .++++++.. ...| ..+
T Consensus 63 ~~~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 142 (406)
T PRK08439 63 PKEVKKADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLG 142 (406)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHH
Confidence 011 1223678999999999999999987775 244443210 0122 467
Q ss_pred HHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC---------------C-----CCC
Q 038123 230 AMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVV-SN---------------T-----WYG 288 (508)
Q Consensus 230 ~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~---------------~-----~~~ 288 (508)
..|...+|++ -+++.+. .+|++++.||..|.++|++|..+.+||+++|.. +. + ...
T Consensus 143 ~~is~~~gl~--Gp~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~r 219 (406)
T PRK08439 143 GFISIEHGLK--GPNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASR 219 (406)
T ss_pred HHHHHHhCCC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcC
Confidence 7899999998 4678888 599999999999999999999999999999962 21 0 001
Q ss_pred CCCccccccccccccceEEEEEeeCCCCccccccceeeEE-eeeeccCCccccceeeccCCCCCcccccchhhHHhhhhh
Q 038123 289 GNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLV-RTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHA 367 (508)
Q Consensus 289 ~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~a 367 (508)
+.|+.. ...++|+||+++||++.+....+ +-++...+ ......|+ + ++.. |...+
T Consensus 220 pfd~~~--~G~v~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~~~~~d~--~---------------~~~~--p~~~~-- 275 (406)
T PRK08439 220 PFDKDR--DGFVMGEGAGALVLEEYESAKKR-GAKIYAEIIGFGESGDA--N---------------HITS--PAPEG-- 275 (406)
T ss_pred CccCCC--CcEEeeCceEEEEEccHHHHHHC-CCeEEEEEEeEEccCCC--C---------------CCCC--CCHHH--
Confidence 112111 25789999999999975432111 11221111 11111111 0 0110 10011
Q ss_pred hhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCHHHHHHhhhh
Q 038123 368 LKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTEELMEASRKT 442 (508)
Q Consensus 368 l~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~e~~~~s~~t 442 (508)
+.+.+.++|+++++ +|||++..|..+...-|.. .+.++-..... +-..+
T Consensus 276 -----------------~~~a~~~al~~ag~--------~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~-~v~s~ 329 (406)
T PRK08439 276 -----------------PLRAMKAALEMAGN--------PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVP-PVSST 329 (406)
T ss_pred -----------------HHHHHHHHHHHcCC--------CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCC-eEECc
Confidence 11234466777765 4799999999877665543 44554321111 00123
Q ss_pred hcccCccccchHHHHHHHH---HHhCCCC------------------------CCCEEEEEeechHHhhhheeEE
Q 038123 443 LERFGNTSSSSVWYELAYL---EANAGVK------------------------RGDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 443 l~r~GNtsSaSi~~~La~~---~~~gri~------------------------~Gd~vlliafGsG~~~~sav~r 490 (508)
=..+||+.+++-.+++... +++|.+. +-++++.-+||-|-.-.++|++
T Consensus 330 K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~ 404 (406)
T PRK08439 330 KGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFK 404 (406)
T ss_pred ccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEe
Confidence 3459999999877766533 3333222 1245677888888777777776
No 93
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.18 E-value=2.8e-09 Score=114.50 Aligned_cols=253 Identities=15% Similarity=0.095 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-----CccEEEEeccCC------------------C--------CCC-chHHHHHHHc
Q 038123 189 EAAMVLFGAIDDLLAATKIRPK-----DIRVLVVNCGVL------------------N--------TTP-SLSAMVINHY 236 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~-----dId~LI~~~s~~------------------~--------~~P-s~a~~v~~~l 236 (508)
....++..|+.++|+++|+++. +...++++++.. . ..+ ..+..|...+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 3567899999999999998542 345566665311 0 012 2467899999
Q ss_pred CCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC---------------C-------CCCCCCccc
Q 038123 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSN---------------T-------WYGGNEVDM 294 (508)
Q Consensus 237 gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~---------------~-------~~~~~dr~~ 294 (508)
|++ -+++.++ .+|++++.||..|.++|++|..+.+||.++|.... . ...+.|+..
T Consensus 172 gl~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~ 248 (437)
T PLN02836 172 GFQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR 248 (437)
T ss_pred CCC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC
Confidence 987 5889999 59999999999999999999999999999886311 0 001111111
Q ss_pred cccccccccceEEEEEeeCCCCcccccccee-eEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHH
Q 038123 295 LLPNCFFRMGAAAVLLSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANIT 373 (508)
Q Consensus 295 lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~ 373 (508)
..++.||||+|+||++.+...++. -++. .+......+|+. ++.. |...++..
T Consensus 249 --~G~~~gEGaaalVLe~~~~A~~~g-~~i~a~I~g~~~~~d~~-----------------~~~~--p~~~~~~~----- 301 (437)
T PLN02836 249 --DGFVIGEGAGVLVLEELEHAKRRG-AKIYAEVRGYGMSGDAH-----------------HITQ--PHEDGRGA----- 301 (437)
T ss_pred --CCeeeecCEEEEEEeeHHHHHHCC-CceEEEEEeeeecCCCC-----------------CCcC--CCcchHHH-----
Confidence 357889999999999865321111 1111 111111112211 0100 11111111
Q ss_pred hccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCH--HHHHHhhhhhccc
Q 038123 374 TLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTE--ELMEASRKTLERF 446 (508)
Q Consensus 374 ~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~--e~~~~s~~tl~r~ 446 (508)
.+.+.++++++|+++ +|||++..|..+...-|. +.+.++-.. ..+.. -.+-..+
T Consensus 302 ------------~~a~~~Al~~Agi~~------~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v-~s~K~~~ 362 (437)
T PLN02836 302 ------------VLAMTRALQQSGLHP------NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAF-SSTKGAT 362 (437)
T ss_pred ------------HHHHHHHHHHcCCCH------hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCee-ECCcccc
Confidence 123457888999998 999999999988765544 334443211 01100 1233467
Q ss_pred CccccchHHHHHHHH---HHhCCCC-------------------------CCCEEEEEeechHHhhhheeEE
Q 038123 447 GNTSSSSVWYELAYL---EANAGVK-------------------------RGDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 447 GNtsSaSi~~~La~~---~~~gri~-------------------------~Gd~vlliafGsG~~~~sav~r 490 (508)
||+.+++-.+++... ++.|.+. +-+.++.-+||-|-.-.++|++
T Consensus 363 GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~ 434 (437)
T PLN02836 363 GHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFT 434 (437)
T ss_pred cccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEe
Confidence 999888776655432 3333211 1134556678887776677765
No 94
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.17 E-value=1.4e-09 Score=115.46 Aligned_cols=94 Identities=14% Similarity=0.179 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAA-TKIRPKDIRVLVVNCGV--LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~-agi~p~dId~LI~~~s~--~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+++|+..|++++|++ +|++|++||.+|++|.. ....+..+.++....||+.+++++.++ +.|++++.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 689999999999997 59999999999998753 222377888999999999779999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 038123 267 NAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~ 284 (508)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999885
No 95
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.17 E-value=1.2e-09 Score=116.14 Aligned_cols=281 Identities=12% Similarity=0.055 Sum_probs=162.6
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcC-CCChhhHHHHHHHHHHhCCccee--ecC---CCccCCCCCCCccchH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESG-NFNDASLEFKQRIIKNSGLGDET--YLP---RAVFCPGYRPNLKDGR 187 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~-~~~~~~~~f~~~i~~~sGI~~r~--~~~---~~~~~~~~~~~~~~~~ 187 (508)
++|.|+|+|+..|-. .+.+++++.+..-. .+.+-+ +| ...+...+. ..+ +.. ..|+. .....
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~G~s~i~~~~-~~-----~~~~~~~~~~g~i~~~~~~~-~~~~~--~~~~~ 68 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLDGRSGLGPIT-RF-----DPSGYPARLAGEVPDFDAAE-HLPGR--LLPQT 68 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHhCCCeEeeCC-cc-----ccccCCCceeEEeCCcChhh-cCCHH--HHhhC
Confidence 469999999999984 67898888764310 000000 00 001111000 000 000 00110 00111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeccCC------------------CC--------CC-chHHHHHHHc
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIR----VLVVNCGVL------------------NT--------TP-SLSAMVINHY 236 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId----~LI~~~s~~------------------~~--------~P-s~a~~v~~~l 236 (508)
.....++..|++++|+++|+++++++ .|+++++.. .. .+ ..+..|...+
T Consensus 69 d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (399)
T cd00832 69 DRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRH 148 (399)
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHh
Confidence 23567899999999999999876542 244443210 00 11 2467899999
Q ss_pred CCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCC-C---------CCC----------CCCCccccc
Q 038123 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVS-N---------TWY----------GGNEVDMLL 296 (508)
Q Consensus 237 gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S-~---------~~~----------~~~dr~~lv 296 (508)
|++ -+++.++ .+|++++.||..|.++|+.|. +.+||.++|... . ... .+-|+..
T Consensus 149 gl~--Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~-- 222 (399)
T cd00832 149 GMR--GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA-- 222 (399)
T ss_pred CCC--CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--
Confidence 997 5788899 599999999999999999999 999999998732 1 000 1112111
Q ss_pred cccccccceEEEEEeeCCCCccccccceeeEE-eeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhc
Q 038123 297 PNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLV-RTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTL 375 (508)
Q Consensus 297 ~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~ 375 (508)
...+.|+||+++||++.+...++ +-++...+ ......|+.. .+. .++.+
T Consensus 223 ~G~~~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~~~~~d~~~-----------------~~~-----~~~~~------- 272 (399)
T cd00832 223 AGYVPGEGGAILVLEDAAAARER-GARVYGEIAGYAATFDPPP-----------------GSG-----RPPGL------- 272 (399)
T ss_pred CCEeeeceEEEEEEeeHHHHHHC-CCeEEEEEEeEEEcCCCCC-----------------CCC-----CHHHH-------
Confidence 35789999999999986542211 11222111 1111122110 000 01111
Q ss_pred cCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCHHHHHHhhhhhcccCccc
Q 038123 376 GPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTEELMEASRKTLERFGNTS 450 (508)
Q Consensus 376 g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~e~~~~s~~tl~r~GNts 450 (508)
.+.+..+|+++++++ ++||++..|..+....|. +.+.+|-..-.+ ..+-..+||+.
T Consensus 273 ----------~~a~~~al~~ag~~~------~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~~pv---~s~K~~~Gh~~ 333 (399)
T cd00832 273 ----------ARAIRLALADAGLTP------EDVDVVFADAAGVPELDRAEAAALAAVFGPRGVPV---TAPKTMTGRLY 333 (399)
T ss_pred ----------HHHHHHHHHHcCCCH------HHccEEEeccCcCCCCCHHHHHHHHHHhCCCCCce---eCCCchhcchH
Confidence 123457888999998 999999999977665444 445565321112 23335689999
Q ss_pred cchHHHHHHHH
Q 038123 451 SSSVWYELAYL 461 (508)
Q Consensus 451 SaSi~~~La~~ 461 (508)
+++-.+++...
T Consensus 334 ~aaG~~~l~~~ 344 (399)
T cd00832 334 AGGAPLDVATA 344 (399)
T ss_pred HHHHHHHHHHH
Confidence 99888888653
No 96
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=2.3e-09 Score=113.98 Aligned_cols=90 Identities=26% Similarity=0.173 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCC-----CchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTT-----PSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~-----Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~ 263 (508)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. ++++++++ .+|++++.||..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHH
Confidence 5899999999999999999999999998754 33221 22222222 3443 46899999 59999999999999
Q ss_pred HHHHcCCCCeEEEEEeccCC
Q 038123 264 DLLNAYPGSYALVVSTEVVS 283 (508)
Q Consensus 264 ~lL~~g~~~~aLVVs~E~~S 283 (508)
.++++|..++|||+++|..|
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHHcCCCCEEEEEEEEecC
Confidence 99999999999999999754
No 97
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.15 E-value=1.9e-09 Score=114.46 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAA-TKIRPKDIRVLVVNCGV--LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~-agi~p~dId~LI~~~s~--~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+.+|+..|++++|++ +|++|++||.+|+++.. ....+..+..+....|++.+++++.++ ++|++|+.|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 689999999999996 79999999999998653 222366777799999998789999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 038123 267 NAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~ 284 (508)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999998874
No 98
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.13 E-value=2.2e-09 Score=113.94 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccC--CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAA-TKIRPKDIRVLVVNCGV--LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~-agi~p~dId~LI~~~s~--~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+.+|+..|++++|++ +|++|++||.+|+++.. ....+..+..+...+|++.+++++.++ ++|++|+.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 689999999999995 69999999999998643 222366777899999998779999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 038123 267 NAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~ 284 (508)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999875
No 99
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.13 E-value=3.9e-09 Score=111.76 Aligned_cols=94 Identities=13% Similarity=0.212 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNT-TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~-~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+.+|+..|++++|+++|++|++||.+|+++.. ... .+..+..+.-.-||+.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 68999999999999999999999999998653 111 244555544555887689999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999998874
No 100
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=3.6e-09 Score=111.72 Aligned_cols=93 Identities=13% Similarity=0.167 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCC-CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNT-TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~-~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++|+|||.+|+++.. ... .+..+..+.-..|++..++++.++ ++|++++.++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 68899999999999999999999999987642 111 133344444457776568899999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 038123 268 AYPGSYALVVSTEVVS 283 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S 283 (508)
+|..+.|||++.|.+|
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999888553
No 101
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.10 E-value=3.5e-09 Score=113.18 Aligned_cols=253 Identities=15% Similarity=0.113 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCCccE----EEEeccCCC--------------------------CCC-chHHHHHHHc
Q 038123 189 EAAMVLFGAIDDLLAATKIR-PKDIRV----LVVNCGVLN--------------------------TTP-SLSAMVINHY 236 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~-p~dId~----LI~~~s~~~--------------------------~~P-s~a~~v~~~l 236 (508)
...+++..|++++|+++|++ +++++. +++.++... .++ ..+..|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 36789999999999999998 666542 334332110 011 2467788899
Q ss_pred CCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCC---------------C-------CCCCCccc
Q 038123 237 KLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNT---------------W-------YGGNEVDM 294 (508)
Q Consensus 237 gl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~---------------~-------~~~~dr~~ 294 (508)
|++ -+++.++ .+|++++.||..|.++|++|..+.+||+++|..... + ..+-|+..
T Consensus 156 ~l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 997 5789999 599999999999999999999999999999963210 0 00111111
Q ss_pred cccccccccceEEEEEeeCCCCccccccceee-EEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHH
Q 038123 295 LLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQ-LVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANIT 373 (508)
Q Consensus 295 lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~ 373 (508)
...+.||||+|+||++.+...++ +-++.. +.......|+. +++. |...+..
T Consensus 233 --~G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~-----------------~~~~--p~~~~~~------ 284 (421)
T PTZ00050 233 --AGFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAH-----------------HITA--PHPDGRG------ 284 (421)
T ss_pred --CCEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCC-----------------CCCC--CCCChHH------
Confidence 35788999999999986532111 112211 11111112211 0000 0001111
Q ss_pred hccCcccchhhHHHHHHHHHHh-cCCCCCcccccccccEEEEcCCCHHHHH-----HHHHHcCCCH-HHHHHhhhhhccc
Q 038123 374 TLGPLVLPVSEQVHFFTNLLLK-KKTKPYIPDYKQAFEHICILATSKKVLD-----EIQKNLELTE-ELMEASRKTLERF 446 (508)
Q Consensus 374 ~~g~~vlp~se~~~~~~~~l~~-~gl~~y~pd~~~did~f~~Hq~~~~vld-----~v~~~Lgl~~-e~~~~s~~tl~r~ 446 (508)
+.+.+.++|++ +|+++ +|||++.+|..+...-| .+.+.++-.. +.+.- -.+-..+
T Consensus 285 -----------~~~ai~~Al~~~Agi~~------~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v-~s~K~~~ 346 (421)
T PTZ00050 285 -----------ARRCMENALKDGANINI------NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYV-SSTKGGL 346 (421)
T ss_pred -----------HHHHHHHHHHhccCCCh------hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceE-ECccccc
Confidence 11235578889 99998 99999999998875543 3344444221 11110 1233468
Q ss_pred CccccchHHHHHHHH---HHhCCCCC--------------------------CCEEEEEeechHHhhhheeEE
Q 038123 447 GNTSSSSVWYELAYL---EANAGVKR--------------------------GDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 447 GNtsSaSi~~~La~~---~~~gri~~--------------------------Gd~vlliafGsG~~~~sav~r 490 (508)
||+.+++-.++|... +++|.+.+ =.+++..+||-|-.-.++|++
T Consensus 347 GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 347 GHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred cccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 999999887777654 33333211 146778889988777777776
No 102
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.10 E-value=1.3e-08 Score=108.75 Aligned_cols=315 Identities=13% Similarity=0.032 Sum_probs=182.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCC--CChhhHHHHHHHHHHhCCccee--ecCCCccCCCCCCCccchH--
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGN--FNDASLEFKQRIIKNSGLGDET--YLPRAVFCPGYRPNLKDGR-- 187 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~--~~~~~~~~~~~~~~~~~~~-- 187 (508)
++|.|+|+|+..|- -.+.++|.+.+.. |. +.+-.. .-.++.++..+. .++.+ +. +..+-++.+
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~-~d--~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLDD----PFVEEFDLPVRIGGHLLEE-FD--HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCCh----hhhhccCCCcceEEEeccC-cc--ccCCHHHHhhc
Confidence 57999999999998 4789999987753 11 111000 001112222211 11111 10 001111111
Q ss_pred HHHHHHHHHHHHHHHHhCCC---CCCCccEEEEeccCC-------------------------CCCC-chHHHHHHHcCC
Q 038123 188 EEAAMVLFGAIDDLLAATKI---RPKDIRVLVVNCGVL-------------------------NTTP-SLSAMVINHYKL 238 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi---~p~dId~LI~~~s~~-------------------------~~~P-s~a~~v~~~lgl 238 (508)
.....++..|+.++|+++|+ +++.+++++-.+... ...| ..+..+...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23566889999999999995 555666555332110 0112 246678888888
Q ss_pred CCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CC---------CC-C-----------CCCCccccc
Q 038123 239 RHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVV-SN---------TW-Y-----------GGNEVDMLL 296 (508)
Q Consensus 239 ~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~---------~~-~-----------~~~dr~~lv 296 (508)
+ -+++.++ .+|++++.||..|.++|+.|..+.++|.++|.. +. .. . .+.|+..
T Consensus 161 ~--G~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 K--AGVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 7 4678888 599999999999999999999999999999973 21 00 1 1112111
Q ss_pred cccccccceEEEEEeeCCCCcccccccee-eEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhc
Q 038123 297 PNCFFRMGAAAVLLSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTL 375 (508)
Q Consensus 297 ~~~lfgDGAaAvLLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~ 375 (508)
...++|+|++++||++.+...++ +.++. .+......+|+... .. |...+..
T Consensus 236 ~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~~---~~----------------~~~~~~~-------- 287 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFHM---VA----------------PDPNGER-------- 287 (418)
T ss_pred CCEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCCC---CC----------------CCCCHHH--------
Confidence 36789999999999986532211 11222 12222222332110 00 0001110
Q ss_pred cCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHH-----HHHHHcCCCHHHHHHhhhhhcccCccc
Q 038123 376 GPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLD-----EIQKNLELTEELMEASRKTLERFGNTS 450 (508)
Q Consensus 376 g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld-----~v~~~Lgl~~e~~~~s~~tl~r~GNts 450 (508)
+.+.+..+|+++++++ +|||++..|..+...-| .+.+.+|-..-.+ ..+=..+||+.
T Consensus 288 ---------~~~a~~~Al~~agi~~------~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K~~~GH~~ 349 (418)
T PRK07910 288 ---------AGHAMTRAIELAGLTP------GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPKSALGHSV 349 (418)
T ss_pred ---------HHHHHHHHHHHhCCCH------HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCccccccccH
Confidence 1123457888999998 99999999998876544 4456666321112 23456699999
Q ss_pred cchHHHHHHHH---HHhCCCC----------------------C--CCEEEEEeechHHhhhheeEE
Q 038123 451 SSSVWYELAYL---EANAGVK----------------------R--GDRIWQTAFGSGVKCNSVVWK 490 (508)
Q Consensus 451 SaSi~~~La~~---~~~gri~----------------------~--Gd~vlliafGsG~~~~sav~r 490 (508)
+++-.++|... +++|.+. + -++++.-+||-|-.-.+++++
T Consensus 350 ~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 350 GAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 99877776543 3333321 1 135666778877766666665
No 103
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.07 E-value=5.3e-09 Score=112.08 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|++||.+|+++.. ....+.++.++.-..|++..++++.++ ++|++|+.|+.+|..++++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 68999999999999999999999999998653 222355666777778998789999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999873
No 104
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.05 E-value=1e-08 Score=108.48 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAA-TKIRPKDIRVLVVNCGVL-NT-TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~-agi~p~dId~LI~~~s~~-~~-~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+++|+..+++++|++ +|++|++||.+|+++... .. .+..+..+....|++.+++++.++ ++|++|+.|+.+|..++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 689999999999997 699999999999987532 22 244566788889998679999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 038123 267 NAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~ 284 (508)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998763
No 105
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.01 E-value=7.4e-08 Score=102.30 Aligned_cols=279 Identities=15% Similarity=0.016 Sum_probs=166.7
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHHhh--cC-CCChhhHHHHHHHHHHhCC-cceeecCCCccCCCCCCCccchHH
Q 038123 113 PCWIYLVDFACYRPPNELKISKKEFIEQARE--SG-NFNDASLEFKQRIIKNSGL-GDETYLPRAVFCPGYRPNLKDGRE 188 (508)
Q Consensus 113 ~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~--~~-~~~~~~~~f~~~i~~~sGI-~~r~~~~~~~~~~~~~~~~~~~~~ 188 (508)
+++|.|.|+|+-.|-. .+.+++.+.+.. ++ .++... |- ....+. ++- ....+ .+..... ....
T Consensus 5 ~~rVvITGiG~vsp~G---~~~e~~w~aL~~G~sg~~~~~~~--~~---~~~~~~~~~~---~~~~~-~~~~~~~-r~~~ 71 (398)
T PRK06519 5 PNDVVITGIGLVSSLG---EGLDAHWNALSAGRPQPNVDTET--FA---PYPVHPLPEI---DWSQQ-IPKRGDQ-RQME 71 (398)
T ss_pred CCCEEEEcceEECCCC---CCHHHHHHHHHcCCCCCCCCccc--cc---CcCccccccc---Chhhc-CCchhhh-hccC
Confidence 5689999999999984 889999987743 11 111100 00 000000 000 00000 0110000 0112
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC-----CccEEEEeccCC-------------------------------------CCCC
Q 038123 189 EAAMVLFGAIDDLLAATKIRPK-----DIRVLVVNCGVL-------------------------------------NTTP 226 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~-----dId~LI~~~s~~-------------------------------------~~~P 226 (508)
....++..|++++|+++|+++. ++++++-.+... ...|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 3677899999999999998543 444455333211 0112
Q ss_pred -chHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCC---------CCC------CC
Q 038123 227 -SLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEV-VSN---------TWY------GG 289 (508)
Q Consensus 227 -s~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~---------~~~------~~ 289 (508)
..+..|...+|++ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|. ++. ... +.
T Consensus 152 n~~a~~is~~~gl~--Gp~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVT--GSSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCC--Ccccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 2467789999997 4889999 59999999999999999999999999999986 221 011 11
Q ss_pred C-----CccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcccccchhhHHhh
Q 038123 290 N-----EVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVG 364 (508)
Q Consensus 290 ~-----dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~ 364 (508)
. +|+ ..+.|+||+++||++.+....| +-++...+.-. .+|. .+. +.
T Consensus 229 ~d~~~~~r~----G~v~GEGAa~lvLE~~~~A~~R-ga~i~AeI~G~-~~d~------------~~~-----~~------ 279 (398)
T PRK06519 229 WSRGGEDGG----GFILGSGGAFLVLESREHAEAR-GARPYARISGV-ESDR------------ARR-----AP------ 279 (398)
T ss_pred hccCccCCC----CeeeeceEEEEEEeeHHHHHhC-CCceEEEEEEE-eecC------------CCC-----Ch------
Confidence 1 233 5788999999999986532111 11111111111 1111 000 00
Q ss_pred hhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCHHHHHHh
Q 038123 365 GHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTEELMEAS 439 (508)
Q Consensus 365 g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~e~~~~s 439 (508)
..+ .+.+.++|+++|+ + +|||+++.|..+...-|. +.+.++.+ +
T Consensus 280 -~~~-----------------~~am~~AL~~Agl-~------~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~p---v--- 328 (398)
T PRK06519 280 -GDL-----------------EASLERLLKPAGG-L------AAPTAVISGATGAHPATAEEKAALEAALAGP---V--- 328 (398)
T ss_pred -HHH-----------------HHHHHHHHHHCCC-c------ccCCEEEeCCCCCCCccHHHHHHHHHHcCCC---c---
Confidence 001 1234578889999 7 899999999988765444 45666754 2
Q ss_pred hhhhcccCccccchHHHHHHHH---HHhCCC
Q 038123 440 RKTLERFGNTSSSSVWYELAYL---EANAGV 467 (508)
Q Consensus 440 ~~tl~r~GNtsSaSi~~~La~~---~~~gri 467 (508)
..+=.-+|||.+++-.+++... +++|.+
T Consensus 329 sS~Ks~~GH~l~AAGa~e~i~~~lal~~g~v 359 (398)
T PRK06519 329 RGIGTLFGHTMEAQFPLGLALAALSVSKGAL 359 (398)
T ss_pred cccchhhccchHHHHHHHHHHHHHHHhcCcc
Confidence 2445569999999888887643 445544
No 106
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.99 E-value=1.6e-08 Score=105.31 Aligned_cols=252 Identities=14% Similarity=0.031 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCccEEEEeccCC-----------------CC--------CC-chHHHHHHHcCCCCC
Q 038123 190 AAMVLFGAIDDLLAATKI--RPKDIRVLVVNCGVL-----------------NT--------TP-SLSAMVINHYKLRHN 241 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi--~p~dId~LI~~~s~~-----------------~~--------~P-s~a~~v~~~lgl~~~ 241 (508)
..+++..|++++++++|+ +++++++++-.+... .. .| ..+..|...+|++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~-- 81 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK-- 81 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC--
Confidence 567889999999999995 667777666443110 00 11 3577889999997
Q ss_pred ceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC----------------------CCCCCcccccccc
Q 038123 242 INSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTW----------------------YGGNEVDMLLPNC 299 (508)
Q Consensus 242 ~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~----------------------~~~~dr~~lv~~~ 299 (508)
-+++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ ..+-|+.. ...
T Consensus 82 Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G~ 158 (342)
T PRK14691 82 GPIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DGF 158 (342)
T ss_pred CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CCc
Confidence 5888999 5999999999999999999999999999998732100 01112211 357
Q ss_pred ccccceEEEEEeeCCCCcccccccee-eEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCc
Q 038123 300 FFRMGAAAVLLSSCRLDKWRSKYEFK-QLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPL 378 (508)
Q Consensus 300 lfgDGAaAvLLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~ 378 (508)
++||||+++||++.+...++ +.++. .+......+|+... .. +...+..
T Consensus 159 v~gEGAa~lvLes~~~A~~r-G~~i~a~I~g~~~~~d~~~~-----------------~~--p~p~~~~----------- 207 (342)
T PRK14691 159 VMGEGAGLLIIEELEHALAR-GAKPLAEIVGYGTSADAYHM-----------------TS--GAEDGDG----------- 207 (342)
T ss_pred cccceEEEEEEeeHHHHHhC-CCCceEEEEEEEEEcCCCCC-----------------CC--CCCCHHH-----------
Confidence 89999999999976532111 11111 11212112222100 00 0000110
Q ss_pred ccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCHHHHHHhhhhhcccCccccch
Q 038123 379 VLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTEELMEASRKTLERFGNTSSSS 453 (508)
Q Consensus 379 vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~e~~~~s~~tl~r~GNtsSaS 453 (508)
..+.+.++|+++|+++ +|||++..|..+...-|.. .+.+|-. ..+. -..+=..+||+.+++
T Consensus 208 ------~~~ai~~AL~~Agl~p------~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~-v~s~K~~~GH~~~Aa 273 (342)
T PRK14691 208 ------AYRAMKIALRQAGITP------EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALA-ITSTKSATGHLLGAA 273 (342)
T ss_pred ------HHHHHHHHHHHcCCCH------HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCce-EECCcccccCCcchh
Confidence 1123457889999998 9999999999887765544 4556521 1111 013345699987776
Q ss_pred HHHHHHHH---HHhCCCC-------------------------CCCEEEEEeechHHhhhheeEEE
Q 038123 454 VWYELAYL---EANAGVK-------------------------RGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 454 i~~~La~~---~~~gri~-------------------------~Gd~vlliafGsG~~~~sav~r~ 491 (508)
-.+++... +++|.+. +-++++..+||-|-...++|++.
T Consensus 274 G~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 274 GGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred hHHHHHHHHHHHhCCccCCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 54444432 2332211 12457788899888888888864
No 107
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.98 E-value=2.7e-08 Score=105.19 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeccCC-CC-CCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAA-TKIRPKDIRVLVVNCGVL-NT-TPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~-agi~p~dId~LI~~~s~~-~~-~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+.+|+.+|++++|++ +|++|++||.+|+++... .. .+..+..+....|++..++++.++ .+|++++.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 689999999999997 599999999999987532 11 244666666688998779999999 69999999999999999
Q ss_pred HcCCCCeEEEEEeccCCC
Q 038123 267 NAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~ 284 (508)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999998763
No 108
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.98 E-value=2.5e-08 Score=106.25 Aligned_cols=311 Identities=12% Similarity=0.125 Sum_probs=175.5
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCC--CChhhHHHHHHHHHHhCCcceeecCCCccC-CCCCCCccchHHHH
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGN--FNDASLEFKQRIIKNSGLGDETYLPRAVFC-PGYRPNLKDGREEA 190 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~--~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~-~~~~~~~~~~~~ea 190 (508)
++|.|.|+|+.-|-. .+.+++.+.+.. |. +.+- .+ ++..+...+.....+.-. ..............
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~-G~sgi~~~-----~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLRE-GRSGITFS-----PE-FAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHc-CCCceeEC-----Cc-ccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 579999999999984 888988887642 10 0000 00 111222222111100000 00000000111235
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-----ccEEEEecc-CC--------------------------CCCC-chHHHHHHHcC
Q 038123 191 AMVLFGAIDDLLAATKIRPKD-----IRVLVVNCG-VL--------------------------NTTP-SLSAMVINHYK 237 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~d-----Id~LI~~~s-~~--------------------------~~~P-s~a~~v~~~lg 237 (508)
..++..|++++|+++|+++++ +++++ +++ .. ...| ..+..|...+|
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~-gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~ 150 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIA-GSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK 150 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEE-ecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence 678899999999999987543 44444 432 00 0112 25788999999
Q ss_pred CCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCC---------------------CCCCCccccc
Q 038123 238 LRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTW---------------------YGGNEVDMLL 296 (508)
Q Consensus 238 l~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~---------------------~~~~dr~~lv 296 (508)
++ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..+ ..+.|+..
T Consensus 151 l~--Gp~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r-- 225 (406)
T PRK07967 151 IK--GVNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR-- 225 (406)
T ss_pred CC--CCccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--
Confidence 97 4788899 5999999999999999999999999999998754210 01112111
Q ss_pred cccccccceEEEEEeeCCCCccccccceeeEE-eeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhc
Q 038123 297 PNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLV-RTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTL 375 (508)
Q Consensus 297 ~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~ 375 (508)
...+.|+||+++||++.+....| +-++...+ ......|+. . ++. | .++..
T Consensus 226 ~G~v~gEGaa~lvLe~~~~A~~r-ga~i~a~i~G~g~~~d~~--~---------------~~~--p--~~~~~------- 276 (406)
T PRK07967 226 DGFVIAGGGGVVVVEELEHALAR-GAKIYAEIVGYGATSDGY--D---------------MVA--P--SGEGA------- 276 (406)
T ss_pred CceeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEECCCCC--C---------------CCC--C--CHHHH-------
Confidence 35788999999999975432111 11222111 111122221 0 100 1 11111
Q ss_pred cCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCHHHHHHhhhhhcccCccc
Q 038123 376 GPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTEELMEASRKTLERFGNTS 450 (508)
Q Consensus 376 g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~e~~~~s~~tl~r~GNts 450 (508)
.+.+..+|++ +. .|||++..|..+...-|. +.+.+|-..-.+ ..+=..+||+.
T Consensus 277 ----------~~a~~~Al~~--~~-------~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~~~~v---~s~K~~~GH~~ 334 (406)
T PRK07967 277 ----------VRCMQMALAT--VD-------TPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAI---SATKSLTGHSL 334 (406)
T ss_pred ----------HHHHHHHHhC--CC-------CCccEEEcCCCCCCCCCHHHHHHHHHHhCCCCCee---ECcccccccCc
Confidence 1223345543 22 489999999988766554 445565321112 23445699999
Q ss_pred cchHHHHHHH---HHHhCCCC-------------------------CCCEEEEEeechHHhhhheeEEE
Q 038123 451 SSSVWYELAY---LEANAGVK-------------------------RGDRIWQTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 451 SaSi~~~La~---~~~~gri~-------------------------~Gd~vlliafGsG~~~~sav~r~ 491 (508)
+|+-.+++.. ++++|.+. +-++++..+||-|-.-.++|++.
T Consensus 335 ~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~ 403 (406)
T PRK07967 335 GAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRR 403 (406)
T ss_pred cccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEe
Confidence 9988777643 23333221 12457777888877777777764
No 109
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.96 E-value=2.7e-09 Score=114.22 Aligned_cols=94 Identities=17% Similarity=0.282 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|+|||.+|++|. +....++.+.+++..+|++.++++++++ .+|++++.++..|..+|++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998764 3223467788899999997578999999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..++|||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998775
No 110
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.90 E-value=5.9e-09 Score=110.55 Aligned_cols=93 Identities=14% Similarity=0.112 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHH-HHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAM-VINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~-v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+.+++..|++++|+++|++|+|||.||+++. ++...+..+.. +++.+|+. ++++++++ .+|++|+.|+..|..+|+
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999998865 44334555553 67778876 79999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
No 111
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=1.4e-07 Score=99.91 Aligned_cols=88 Identities=15% Similarity=0.032 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|+.+|++++|+++|++++|||.++.++.. .+.....+++.+|++ ..+..++. .||+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999998753221 111124588999996 57888888 59999999999999999999
Q ss_pred CCCeEEEEEeccC
Q 038123 270 PGSYALVVSTEVV 282 (508)
Q Consensus 270 ~~~~aLVVs~E~~ 282 (508)
..+.||||+.|..
T Consensus 100 ~~d~vLvvg~e~~ 112 (388)
T PRK08142 100 KCSVALITLAGRP 112 (388)
T ss_pred CCCEEEEEeeeec
Confidence 9999999999863
No 112
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.88 E-value=8.7e-09 Score=103.57 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
.+.+|+..|++++|++++++|++||.||++|. +....+..+..+.-..|++.+++++.++ +.|++|+.|+.+|...++
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhc
Confidence 37899999999999999999999999999975 3334677788888899998889999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCCC
Q 038123 268 AYPGSYALVVSTEVVSNT 285 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~~ 285 (508)
+|..+.+|++++|.+|..
T Consensus 104 sG~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSRV 121 (264)
T ss_dssp TTS-SEEEEEEEEETTTS
T ss_pred CCCccEEEEecccccccc
Confidence 999999999999999873
No 113
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.88 E-value=1.8e-07 Score=102.09 Aligned_cols=91 Identities=12% Similarity=0.015 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIR--PKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~--p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++ ++|||.+++++............+++++|+.+ ....... .||+++..++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999 99999998764322222334578999999974 4555555 589999999999999999
Q ss_pred cCCCCeEEEEEeccC
Q 038123 268 AYPGSYALVVSTEVV 282 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~ 282 (508)
+|..+.|||+++|..
T Consensus 105 sG~advVLv~G~E~~ 119 (498)
T PRK08257 105 AGEADVALVAGAEAQ 119 (498)
T ss_pred CCCCCEEEEeeeeec
Confidence 999999999999974
No 114
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.77 E-value=3.5e-07 Score=115.01 Aligned_cols=217 Identities=13% Similarity=0.100 Sum_probs=136.8
Q ss_pred hHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccC-CCC---------CC------CCCC
Q 038123 228 LSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVV-SNT---------WY------GGNE 291 (508)
Q Consensus 228 ~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~-S~~---------~~------~~~d 291 (508)
.+.+|.++||++ -+++.++ .+|++++.||.+|.+.|+.|..+.+|+.+++.. +.. .. .+-|
T Consensus 185 ~A~RIS~~f~L~--Gps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLG--GMNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCC--CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 478899999997 5889999 599999999999999999999999999998763 210 00 1112
Q ss_pred ccccccccccccceEEEEEeeCCCCccccccceeeEEe-eeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhh
Q 038123 292 VDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVR-THKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKA 370 (508)
Q Consensus 292 r~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~-t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~ 370 (508)
... ..++.|+|+++++|.+-....+ .+=++..+++ +...+||+. . + ++ .|...+
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~-dGd~IyAvI~G~g~~~DG~~-~------------~--it--aP~~~g----- 316 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAER-DGDRIYAVIKGVGASSDGKF-K------------S--IY--APRPEG----- 316 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHh-CCCcEEEEEEEEEEcCCCCC-C------------C--Cc--CCCHHH-----
Confidence 111 3578999999999987543111 1112222222 222223221 0 1 11 011111
Q ss_pred hHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCH---HHHHHhhhh
Q 038123 371 NITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTE---ELMEASRKT 442 (508)
Q Consensus 371 ~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~---e~~~~s~~t 442 (508)
|.+.+.++++++|+++ ++|+++..|..|..+-|. +.+.++-.. ..+. --.+
T Consensus 317 --------------q~~~i~~Al~~Agi~p------~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~-vgSv 375 (2582)
T TIGR02813 317 --------------QAKALKRAYDDAGFAP------HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIA-LGSV 375 (2582)
T ss_pred --------------HHHHHHHHHHHcCCCH------HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCce-eecc
Confidence 1234557889999999 999999999988766444 445565321 1110 0123
Q ss_pred hcccCccccchHHHHHHHH---HHhCCCC--------------------------------CC--CEEEEEeechHHhhh
Q 038123 443 LERFGNTSSSSVWYELAYL---EANAGVK--------------------------------RG--DRIWQTAFGSGVKCN 485 (508)
Q Consensus 443 l~r~GNtsSaSi~~~La~~---~~~gri~--------------------------------~G--d~vlliafGsG~~~~ 485 (508)
=..+|||-+++=...|... +++|.+. .| .++..-+||-|-+-.
T Consensus 376 Ks~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~ 455 (2582)
T TIGR02813 376 KSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNF 455 (2582)
T ss_pred ccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeE
Confidence 3568999999887777653 2332221 11 467788899988888
Q ss_pred heeEEEec
Q 038123 486 SVVWKALR 493 (508)
Q Consensus 486 sav~r~~~ 493 (508)
.++++-..
T Consensus 456 hvvlee~~ 463 (2582)
T TIGR02813 456 HMVLEEYS 463 (2582)
T ss_pred EEEEeecC
Confidence 88888653
No 115
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.76 E-value=4e-08 Score=97.17 Aligned_cols=120 Identities=19% Similarity=0.255 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC------ccEEEEeccCC-----------C------C------CC-chHHHHHHHcCC
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKD------IRVLVVNCGVL-----------N------T------TP-SLSAMVINHYKL 238 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~d------Id~LI~~~s~~-----------~------~------~P-s~a~~v~~~lgl 238 (508)
....++..|+.++|+++|+++++ +++++-++..+ . + .| ..+..|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 47789999999999999999853 44444333221 0 1 23 247889999999
Q ss_pred CCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEec-cCCC---------CCCCC------CCccccccccccc
Q 038123 239 RHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTE-VVSN---------TWYGG------NEVDMLLPNCFFR 302 (508)
Q Consensus 239 ~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E-~~S~---------~~~~~------~dr~~lv~~~lfg 302 (508)
+ -+++.+++ +|++++.||..|.++|+.|..+.|||.++| .++. ..... .|+.. ...++|
T Consensus 166 ~--G~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 R--GPSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp ---SSEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred C--Cccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 7 57888994 999999999999999999999999999999 4443 11111 11111 358999
Q ss_pred cceEEEEEeeC
Q 038123 303 MGAAAVLLSSC 313 (508)
Q Consensus 303 DGAaAvLLs~~ 313 (508)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999864
No 116
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.72 E-value=9.1e-07 Score=94.05 Aligned_cols=277 Identities=13% Similarity=0.092 Sum_probs=160.4
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCC-----C----CCc-
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGY-----R----PNL- 183 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~-----~----~~~- 183 (508)
++|.|.+++...|- -.+.+++.+.+.. -++||..-+-++...+.... . ...
T Consensus 3 ~rvviTG~g~vs~l---G~~~~~~~~~l~~----------------g~sgi~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 63 (412)
T COG0304 3 RRVVITGLGIVSSL---GNGVEEVWAALLA----------------GKSGIRPITRFDASGLGVKIAGEIKDLDDQIAKK 63 (412)
T ss_pred ceEEEecceeeecc---cCCHHHHHHHHhc----------------CCCCCCccccccccCCCCcccccccccccccchH
Confidence 57999999999887 3566666665432 12344322221111111000 0 000
Q ss_pred -cchHHHHHHHHHHHHHHHHHhCCCC-CCCcc--E-EEEeccC---C---------------C---------CCC-chHH
Q 038123 184 -KDGREEAAMVLFGAIDDLLAATKIR-PKDIR--V-LVVNCGV---L---------------N---------TTP-SLSA 230 (508)
Q Consensus 184 -~~~~~ea~~la~~Aa~~aL~~agi~-p~dId--~-LI~~~s~---~---------------~---------~~P-s~a~ 230 (508)
.........++..|++++++++|++ ..+++ . +++.++. . . ..| ..+.
T Consensus 64 ~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 143 (412)
T COG0304 64 ERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAG 143 (412)
T ss_pred HhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHH
Confidence 0133457889999999999999998 33343 2 2233321 0 0 123 2467
Q ss_pred HHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEecc-CCC--------------C------CCCC
Q 038123 231 MVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEV-VSN--------------T------WYGG 289 (508)
Q Consensus 231 ~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~-~S~--------------~------~~~~ 289 (508)
.++..+|++ -+.+.+++ +|+++..||..|.++|+.|..+.+++.++|. ++. . .-++
T Consensus 144 ~vs~~~g~~--G~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrP 220 (412)
T COG0304 144 NVAIVFGLK--GPNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRP 220 (412)
T ss_pred HHHHHhCCC--CCcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCC
Confidence 788999997 58889995 9999999999999999999999999999976 332 1 0112
Q ss_pred --CCccccccccccccceEEEEEeeCCCCccccccceeeE-EeeeeccCCccccceeeccCCCCCcccccchhhHHhhhh
Q 038123 290 --NEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQL-VRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGH 366 (508)
Q Consensus 290 --~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~-~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~ 366 (508)
.+|+ ..++|.||+++||+..+....| +-++... +.....+| .|+. .. |...++
T Consensus 221 fd~~Rd----Gfv~gEGag~lVLE~~ehA~aR-GA~Iyaei~G~g~~~D--a~h~-t~----------------P~p~g~ 276 (412)
T COG0304 221 FDKNRD----GFVIGEGAGALVLEELEHALAR-GAKIYAEIVGYGTTSD--AYHI-TA----------------PAPDGE 276 (412)
T ss_pred CCCCCC----CEEEecceeEEEecChhhHHhC-CCceEEEEEEEEeccc--cccc-CC----------------CCCCCc
Confidence 2344 5789999999999987642222 1122222 21111122 2221 11 110111
Q ss_pred hhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHH-----HHcCCCHHHHHHhhh
Q 038123 367 ALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQ-----KNLELTEELMEASRK 441 (508)
Q Consensus 367 al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~-----~~Lgl~~e~~~~s~~ 441 (508)
.- .+.+..+|+++|+.+ +||||+-.|..+-..-|..+ +.++=...++.- ..
T Consensus 277 Ga-----------------~~am~~AL~~Agl~~------~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~v-ss 332 (412)
T COG0304 277 GA-----------------IRAMRAALADAGLTP------EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPV-SS 332 (412)
T ss_pred hH-----------------HHHHHHHHHHcCCCH------hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCcee-ee
Confidence 00 023456888999998 99999999998877665543 444421111100 13
Q ss_pred hhcccCccccchHHHHHHH
Q 038123 442 TLERFGNTSSSSVWYELAY 460 (508)
Q Consensus 442 tl~r~GNtsSaSi~~~La~ 460 (508)
+-.-+||+-.|+=.++...
T Consensus 333 tKs~tGH~lGAaGaveai~ 351 (412)
T COG0304 333 TKSLTGHTLGAAGAVEAII 351 (412)
T ss_pred cccccccChhhHHHHHHHH
Confidence 3344677666655554443
No 117
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.71 E-value=1.1e-06 Score=92.92 Aligned_cols=88 Identities=10% Similarity=0.085 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHhCC-CCC-CCccEEEEeccC-CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATK-IRP-KDIRVLVVNCGV-LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~ag-i~p-~dId~LI~~~s~-~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
..+|+.+|++++|+++| +++ +|||.+++++.. +.........+...+|+. ..+.+.+ |+++..++..|...+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 57899999999999999 997 799999875421 111111223466889985 3445554 788999999999999
Q ss_pred HcCCCCeEEEEEeccC
Q 038123 267 NAYPGSYALVVSTEVV 282 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~ 282 (508)
++|..++|||++.|..
T Consensus 100 ~sG~~d~vLv~g~~~~ 115 (385)
T PRK06066 100 NSGLANVVVVEAHSKP 115 (385)
T ss_pred HcCCCCEEEEEEEeec
Confidence 9999999999999864
No 118
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=1.1e-07 Score=101.03 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CC-CCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VL-NTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~-~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+.+|+.+|++++|+++|++|++||.+|+++. +. ...+..+.++....|++..++++.++ ++|++|+.|+..|...++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 22 22355677788999998679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCC
Q 038123 268 AYPGSYALVVSTEVVSN 284 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~ 284 (508)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999885
No 119
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.64 E-value=1.2e-07 Score=100.33 Aligned_cols=94 Identities=15% Similarity=0.236 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL-NTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~-~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|++|+|||.+|+++... ...+..+.+++..+|++.+++.+.++ .+|++++.++..|...+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 688999999999999999999999999876421 11334567789999997568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+.|||++.|.+|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898773
No 120
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.55 E-value=3.5e-07 Score=97.29 Aligned_cols=93 Identities=20% Similarity=0.141 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL-NTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~-~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
..+|+.+|++++|+++|++++|||.+++++... .........+.+.+|++ .++++.++ ++|++++.++..|...+++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 578999999999999999999999999876422 11122235688899997 58899999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+.+||++.|..|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998653
No 121
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.54 E-value=4.3e-07 Score=97.65 Aligned_cols=94 Identities=22% Similarity=0.232 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--ccEEEEeccC---CCCCCchHHHHHHHcCCC------CCceEEEecCccchHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKD--IRVLVVNCGV---LNTTPSLSAMVINHYKLR------HNINSFNLGGMGCSAGIIA 258 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~d--Id~LI~~~s~---~~~~Ps~a~~v~~~lgl~------~~~~~~dl~g~gCs~gl~A 258 (508)
..+|+.+|++++|+++|++|+| ||.+|+++.. +...+..+..+...+|++ ..++++.++ .+|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 6899999999999999999999 9999987642 112355666777565554 378999999 599999999
Q ss_pred HHHHHHHHHcCCCCeEEEEEeccCCC
Q 038123 259 IDLAKDLLNAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 259 L~lA~~lL~~g~~~~aLVVs~E~~S~ 284 (508)
+..|...|++|..+.|||+++|..|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999998765
No 122
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.49 E-value=5e-07 Score=97.01 Aligned_cols=92 Identities=17% Similarity=0.027 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCchH-HHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL-NTTPSLS-AMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~-~~~Ps~a-~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..+|+.+|++++|+++|++++|||.+++++... ...+..+ ..++..+|++ +++++.+. .+|+++..||..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 479999999999999999999999988776332 1122333 3467999998 58999999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCC
Q 038123 268 AYPGSYALVVSTEVVS 283 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S 283 (508)
+|..+.|||+++|..|
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999754
No 123
>PRK07937 lipid-transfer protein; Provisional
Probab=98.48 E-value=8.8e-06 Score=85.19 Aligned_cols=238 Identities=15% Similarity=-0.003 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccC-CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCGV-LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s~-~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
.+|+.+|++++|+++|++++|||.++.+++. ..........+...+|+.+..+...+. +++..++..|...+++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhcC
Confidence 6899999999999999999999988644331 111111123455667874345555555 35777999999999999
Q ss_pred CCCeEEEEEeccCCC------------C-CC-C--------------------C-------------------C------
Q 038123 270 PGSYALVVSTEVVSN------------T-WY-G--------------------G-------------------N------ 290 (508)
Q Consensus 270 ~~~~aLVVs~E~~S~------------~-~~-~--------------------~-------------------~------ 290 (508)
..++|||++.|..+. . |. + + |
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 999999999996531 0 10 0 0 0
Q ss_pred -------------CccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcccccc
Q 038123 291 -------------EVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVS 357 (508)
Q Consensus 291 -------------dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls 357 (508)
++-.++.+|...|||+|+||.+.+.-++. +-+...+.......+... ...
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l-~~~pv~I~g~~~~~~~~~----~~~------------ 243 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRAREL-RERPAWITGIEHRIESPS----LGA------------ 243 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHc-CCCcEEEEEEEEeeCCcc----ccc------------
Confidence 00112346778999999999976432110 001111222111111110 000
Q ss_pred hhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHh-cCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCH-HH
Q 038123 358 KDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLK-KKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTE-EL 435 (508)
Q Consensus 358 ~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~-~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~-e~ 435 (508)
+++... + ....+.++ +|+++ +|||.+=+|-.-....-...+.||+.. ..
T Consensus 244 ~d~~~~-----------------~------~~~~a~~~aAgi~~------~diD~~Ei~D~F~~~~l~~~e~lGl~g~~p 294 (352)
T PRK07937 244 RDLTRS-----------------P------STALAAEAATGGDA------GGVDVAELHAPFTHQELILREALGLGDKTK 294 (352)
T ss_pred cccccH-----------------H------HHHHHHHHhcCCCH------HHCCEEEEeCCChHHHHHHHHHcCCCCCCC
Confidence 000000 0 11123444 48988 999999999998877777889999854 35
Q ss_pred HHHhhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeech
Q 038123 436 MEASRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGS 480 (508)
Q Consensus 436 ~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGs 480 (508)
+.+|=-.|. ||-..++=...+.++..+=+=+..++.+..+.|.
T Consensus 295 vN~~GG~l~--ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~~Gg 337 (352)
T PRK07937 295 VNPSGGALA--ANPMFAAGLERIGEAARHIWDGSARRALAHATSG 337 (352)
T ss_pred cCCCccchh--cCchhHHHHHHHHHHHHHHhccCCCEEEEecccc
Confidence 544444453 6665545555555554431112356666666664
No 124
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.43 E-value=1.1e-06 Score=94.32 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC-CCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL-NTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~-~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.+|++++|+++|+++++||.+|+++... ...+..+..+.-..|++..++++.++ ++|++|+.++..|..+|++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 689999999999999999999999999987432 11244566655666676568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 125
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.36 E-value=3.1e-05 Score=78.05 Aligned_cols=192 Identities=17% Similarity=0.211 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
-..|..+|++.+|+|++++++|||.++-.--..+.++ +++.+..|++ +.+.+-| +||...-+|.+|.-++..|
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCC
Confidence 4567899999999999999999999885544433333 4677888865 6899997 9999999999999999999
Q ss_pred CCCeEEEEEeccCC---CCCCC----CCCccccccccccccceEEEEEeeCCCCccccccceeeEEeeeeccCCccccce
Q 038123 270 PGSYALVVSTEVVS---NTWYG----GNEVDMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCM 342 (508)
Q Consensus 270 ~~~~aLVVs~E~~S---~~~~~----~~dr~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~ 342 (508)
-.++||+.++-... +.|.. +..|.. +...---||+|+||++.+.. .++.+. +-|+--+
T Consensus 124 ~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~-----p~It~~------T~GkVvD-- 188 (329)
T PF07451_consen 124 FADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG-----PRITHA------TIGKVVD-- 188 (329)
T ss_dssp S-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S-----EEEEEE------E----B---
T ss_pred CcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC-----cEEEEE------EEEEEEE--
Confidence 99999988776543 12222 233331 34445579999999987653 222221 1222111
Q ss_pred eeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcC---CCH
Q 038123 343 HLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILA---TSK 419 (508)
Q Consensus 343 ~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq---~~~ 419 (508)
.|+ +|-.++.. ++. |. .+.-+.+.++..+.+| +|.|.++.-- .|+
T Consensus 189 ---------~G~---~D~~nMGa-AMA-----------PA--A~dTI~~h~~D~g~~p------~dYDlIvTGDLg~vG~ 236 (329)
T PF07451_consen 189 ---------MGI---KDPNNMGA-AMA-----------PA--AADTIEQHFKDTGRSP------DDYDLIVTGDLGKVGR 236 (329)
T ss_dssp ---------SS------TT-HHH-HHH-----------HH--HHHHHHHHHHHCT--G------GG-SEEEESS-HHHHH
T ss_pred ---------cCC---CCcccchh-hHh-----------HH--HHHHHHHHHHHhCCCh------hhcCeEEecchHHHHH
Confidence 011 12122211 110 10 0112335566778888 9999998754 567
Q ss_pred HHHHHHHHHcCCCHHH
Q 038123 420 KVLDEIQKNLELTEEL 435 (508)
Q Consensus 420 ~vld~v~~~Lgl~~e~ 435 (508)
.++..+.++-|++.++
T Consensus 237 ~il~~Ll~~~G~~i~~ 252 (329)
T PF07451_consen 237 KILRDLLKEKGYDISE 252 (329)
T ss_dssp HHHHHHHHHTT---GG
T ss_pred HHHHHHHHHcCCCCcc
Confidence 8888888888887665
No 126
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.26 E-value=2.4e-05 Score=78.95 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+|+.-|++.+|++++++|+|++-+|+.+. +-+.--..+.+.+---||+.++.+..++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 7889999999999999999999999998753 3333334456666667888889999999 8999999999999999999
Q ss_pred CCCCeEEEEEeccCCCC
Q 038123 269 YPGSYALVVSTEVVSNT 285 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~~ 285 (508)
|..+.++..+.|.+|..
T Consensus 109 G~~divVaGGmEsMS~v 125 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSNV 125 (396)
T ss_pred CCccEEEecccchhccC
Confidence 99999999999999963
No 127
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.26 E-value=1.4e-05 Score=80.22 Aligned_cols=280 Identities=16% Similarity=0.116 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc--CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG--VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s--~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
.-++...+.+..+++++++|+.|+-+++.+. +... -+.+.+-+-.-|++..++...++ -.|++|+.|+.....-++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir 138 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIR 138 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHh
Confidence 4577888999999999999999998888764 3322 23344445556888778888888 699999999999999999
Q ss_pred cCCCCeEEEEEeccCCCCCCCCC-------------Cccccccc------------------------------------
Q 038123 268 AYPGSYALVVSTEVVSNTWYGGN-------------EVDMLLPN------------------------------------ 298 (508)
Q Consensus 268 ~g~~~~aLVVs~E~~S~~~~~~~-------------dr~~lv~~------------------------------------ 298 (508)
+|.++--|-.+.|.+|.++-.+. -++.|++.
T Consensus 139 ~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G 218 (435)
T KOG1389|consen 139 AGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKG 218 (435)
T ss_pred cCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcC
Confidence 99999999999999886531100 01111100
Q ss_pred ----------cccccce---EEEEEeeCCCCcc----------ccccceeeEEeeeeccCCccccceeeccCCCCCcccc
Q 038123 299 ----------CFFRMGA---AAVLLSSCRLDKW----------RSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLS 355 (508)
Q Consensus 299 ----------~lfgDGA---aAvLLs~~~~~~~----------~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ 355 (508)
+-..|.- -+++++.++.-+- ++-|+=.+ +.+ .+.+.+ -.|+. -++-
T Consensus 219 ~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdG---ttT--agNsSQ----vSDGa--~aVL 287 (435)
T KOG1389|consen 219 KFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDG---TTT--AGNSSQ----VSDGA--GAVL 287 (435)
T ss_pred cchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCC---ccc--cCchhh----cccch--hhhh
Confidence 0111211 0113332221110 01121111 111 111110 01111 0111
Q ss_pred cch-------hhHHhhh------hhhhhhHHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHH
Q 038123 356 VSK-------DMIEVGG------HALKANITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVL 422 (508)
Q Consensus 356 ls~-------d~~~~~g------~al~~~i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vl 422 (508)
|-+ .+|.+.- --++..+--+||.| .+..+++++|++. +|||.|=++-+-..=.
T Consensus 288 LmkRs~A~qlgLPvlgvfr~f~~vGv~P~iMGiGPav--------AIp~alk~aGL~v------~did~FEINEAFAsQ~ 353 (435)
T KOG1389|consen 288 LMKRSVAMQLGLPVLGVFRDFAAVGVPPAIMGIGPAV--------AIPKALKAAGLEV------DDIDLFEINEAFASQA 353 (435)
T ss_pred hhhhhhHhhcCCceeEEeeeeeeecCCHHHcCCCchh--------hhHHHHHHcCCcc------cccceeehhHHHHHHH
Confidence 110 0111000 00112233345544 2457788999997 9999998876655444
Q ss_pred HHHHHHcCCCHHHHHH---hhhhhcccCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhheeEEEeccCCCC
Q 038123 423 DEIQKNLELTEELMEA---SRKTLERFGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSVVWKALRNVEKP 498 (508)
Q Consensus 423 d~v~~~Lgl~~e~~~~---s~~tl~r~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sav~r~~~~~~~~ 498 (508)
-...++|+|++|++.+ +...-|-.|-||+=.+--.|+++.++|+-.+.. |+-+..|.|+- .++|++....+++-
T Consensus 354 ~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKrrgkd~~~G-VvSmCIGtGmG-aAAvFer~~~~d~~ 430 (435)
T KOG1389|consen 354 LYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKRRGKDCRFG-VVSMCIGTGMG-AAAVFERGGGVDEL 430 (435)
T ss_pred HHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHhhccccccc-eEEEeecCCcc-hheeeecCCCCchh
Confidence 5567899999999853 122346788888888888888887766533232 44444555543 47888887777643
No 128
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.12 E-value=9.6e-05 Score=87.53 Aligned_cols=289 Identities=17% Similarity=0.135 Sum_probs=168.8
Q ss_pred CceEEEEEeEEeCCCCceecHHHHHHHHhhcC----CCChhhHHHHHHHHHHhCC-----cceeecCC------------
Q 038123 114 CWIYLVDFACYRPPNELKISKKEFIEQARESG----NFNDASLEFKQRIIKNSGL-----GDETYLPR------------ 172 (508)
Q Consensus 114 ~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~----~~~~~~~~f~~~i~~~sGI-----~~r~~~~~------------ 172 (508)
.+|=|+|++|.+|. --+.++|++.+..-. .+.++. |=.+..+- ..++|...
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 45999999999999 577889998876421 122221 11122222 11122111
Q ss_pred CccCCCCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCcc----EEEEec-cCCCCCC-------------------ch
Q 038123 173 AVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIR----VLVVNC-GVLNTTP-------------------SL 228 (508)
Q Consensus 173 ~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId----~LI~~~-s~~~~~P-------------------s~ 228 (508)
..+.++| +..+..+=...|..+.+-++|+++|+.|+.+. .|+.++ ..+|... -.
T Consensus 76 ~fFgisP--rEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~ 153 (1061)
T COG3321 76 LFFGISP--REAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVA 153 (1061)
T ss_pred HHcCCCH--HHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHH
Confidence 1111111 11111111334889999999999999999887 455553 3232211 15
Q ss_pred HHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCC-CC-CC--------C--CC----Cc
Q 038123 229 SAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVS-NT-WY--------G--GN----EV 292 (508)
Q Consensus 229 a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S-~~-~~--------~--~~----dr 292 (508)
+.+|...|+++ .+++.|. .+||+.+.|+.+|...|+.|..+.||+-+....- .. ++ . ++ |.
T Consensus 154 a~Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~ 230 (1061)
T COG3321 154 AGRISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDA 230 (1061)
T ss_pred HHHHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceeccc
Confidence 78899999997 6899999 6999999999999999999999888887776542 11 11 0 11 11
Q ss_pred cccccccccccceEEEEEeeCCCCccccccceeeEEe-eeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhh
Q 038123 293 DMLLPNCFFRMGAAAVLLSSCRLDKWRSKYEFKQLVR-THKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKAN 371 (508)
Q Consensus 293 ~~lv~~~lfgDGAaAvLLs~~~~~~~~~~~~L~~~~~-t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~ 371 (508)
+ -..++.|.|+++++|-+-... .+.+=+|..+++ +....||+ .+ |++- |...
T Consensus 231 ~--adG~v~geG~g~vvLKrl~~A-~~dgd~IyavI~gsavn~dG~------------~~-glta----P~~~------- 283 (1061)
T COG3321 231 D--ADGYVRGEGAGVVVLKRLSDA-ERDGDRIYAVIRGSAVNQDGR------------SN-GLTA----PNLE------- 283 (1061)
T ss_pred C--CCCEEEeeeEEEEEEEEhHHH-HhCCCeEEEEEEeeeeccCCC------------cC-CCCC----CCHH-------
Confidence 1 135689999999999875431 111222333332 11122221 11 2211 1111
Q ss_pred HHhccCcccchhhHHHHHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHH-----HHHcCCCH-HHHHHhhhhhcc
Q 038123 372 ITTLGPLVLPVSEQVHFFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEI-----QKNLELTE-ELMEASRKTLER 445 (508)
Q Consensus 372 i~~~g~~vlp~se~~~~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v-----~~~Lgl~~-e~~~~s~~tl~r 445 (508)
.|...+.+.|++++++| ++|+++=.|..|..+-|.+ .+.++-.. +....--..-..
T Consensus 284 ------------aQ~~v~~~al~~a~i~p------~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsN 345 (1061)
T COG3321 284 ------------AQADVIREALADAGIDP------ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSN 345 (1061)
T ss_pred ------------HHHHHHHHHHHhcCCCc------ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccc
Confidence 12234557889999999 9999999999877665544 34444221 222211234467
Q ss_pred cCccccchHHHHHHH
Q 038123 446 FGNTSSSSVWYELAY 460 (508)
Q Consensus 446 ~GNtsSaSi~~~La~ 460 (508)
.||+.+|.=.-.|-.
T Consensus 346 iGH~~~AaGiagliK 360 (1061)
T COG3321 346 IGHLEAAAGIAGLIK 360 (1061)
T ss_pred cccHHHHHHHHHHHH
Confidence 899988876655543
No 129
>PRK07855 lipid-transfer protein; Provisional
Probab=98.01 E-value=2.3e-05 Score=83.14 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++.....++. .||+++..++..|...+++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 47899999999999999999999999874432 1222 4588999997424556888 59999999999999999999
Q ss_pred CCCeEEEEEe
Q 038123 270 PGSYALVVST 279 (508)
Q Consensus 270 ~~~~aLVVs~ 279 (508)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 130
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.96 E-value=5.5e-05 Score=77.45 Aligned_cols=119 Identities=18% Similarity=0.233 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCC---Ccc-----EEEEeccCC----------------------CCCC----ch-HHHH
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPK---DIR-----VLVVNCGVL----------------------NTTP----SL-SAMV 232 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~---dId-----~LI~~~s~~----------------------~~~P----s~-a~~v 232 (508)
.....++..|++++|+++++.+. +.| ++| .+..+ +..| ++ +.+|
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~i-Gtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~v 170 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLI-GTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYV 170 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEe-ccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchh
Confidence 45889999999999999998776 222 333 32210 1233 33 7889
Q ss_pred HHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-----CC----------------CCC--
Q 038123 233 INHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSN-----TW----------------YGG-- 289 (508)
Q Consensus 233 ~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~-----~~----------------~~~-- 289 (508)
..+||++ .+.+.++ .+|+.+..+|.-|.++|+.|..+..|--++|.+-. .| -++
T Consensus 171 sm~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD 247 (440)
T KOG1394|consen 171 SMKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFD 247 (440)
T ss_pred hhhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCc
Confidence 9999998 5888999 69999999999999999999887777777786321 00 011
Q ss_pred CCccccccccccccceEEEEEeeCC
Q 038123 290 NEVDMLLPNCFFRMGAAAVLLSSCR 314 (508)
Q Consensus 290 ~dr~~lv~~~lfgDGAaAvLLs~~~ 314 (508)
.+|+ ..++|+|++.++|+.-+
T Consensus 248 ~~Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 248 KKRD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred cCCC----ceeeccceeEEehHhHH
Confidence 1244 57899999999998754
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.65 E-value=0.00018 Score=76.41 Aligned_cols=95 Identities=16% Similarity=0.244 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCCccEEEEeccC--CCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAAT--KIRPKDIRVLVVNCGV--LNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 190 a~~la~~Aa~~aL~~a--gi~p~dId~LI~~~s~--~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~l 265 (508)
++++.....+..+++. ++++.+||-+|+.|.. ....+..+..++...|++.+++.+.++ .+|++++.|+.+|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 4566666666666543 6888889999988743 334678889999999998779999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCCC
Q 038123 266 LNAYPGSYALVVSTEVVSNT 285 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~ 285 (508)
|++|..+.||+++.|++|..
T Consensus 106 I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999863
No 132
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.33 E-value=0.00026 Score=71.81 Aligned_cols=60 Identities=27% Similarity=0.272 Sum_probs=42.7
Q ss_pred HHHHhhhhhcccCccccchHHHHHHHHH--HhCCCCCCCEEEEEeechHHhhhheeEEEecc
Q 038123 435 LMEASRKTLERFGNTSSSSVWYELAYLE--ANAGVKRGDRIWQTAFGSGVKCNSVVWKALRN 494 (508)
Q Consensus 435 ~~~~s~~tl~r~GNtsSaSi~~~La~~~--~~gri~~Gd~vlliafGsG~~~~sav~r~~~~ 494 (508)
+++||...-.+.||+.++|++..|+.++ ..+....|+||.|.++|||....-...+...+
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TT
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCC
Confidence 4566666668899999999999999998 44555589999999999996554444444433
No 133
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=96.93 E-value=0.0012 Score=65.38 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
.|++.+|..++|++++++-++|+--++.-. .+. ....+-.-++|+. .++.||+++ .|+.|..||-+|++++++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 467899999999999999998874333211 111 1123445589997 799999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCCC
Q 038123 270 PGSYALVVSTEVVSN 284 (508)
Q Consensus 270 ~~~~aLVVs~E~~S~ 284 (508)
..+.||..+-|.+++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999875
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.74 E-value=0.02 Score=56.69 Aligned_cols=92 Identities=14% Similarity=0.090 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEec----cCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNC----GVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~----s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~l 265 (508)
+.++..-|++.+|+.+++.++.+|.+|+.. |.+- --++..|--+.|.+.+.++..|+ -=|.+|+.++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDg--IYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDG--IYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCc--eEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 688999999999999999999999999763 3321 11223344455566678999999 6999999999999999
Q ss_pred HHcCCCCeEEEEEeccCCC
Q 038123 266 LNAYPGSYALVVSTEVVSN 284 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~ 284 (508)
+..+..+-||.-++|++|.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999999999999999996
No 135
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.35 E-value=0.044 Score=45.48 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=46.9
Q ss_pred HHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHHHHHcCCCCeEEEEE
Q 038123 202 LAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVS 278 (508)
Q Consensus 202 L~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs 278 (508)
|+++|++++|||.+|... ........+.+++|++++.... +..+++|++-..+|..+..-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 689999999999999643 2234556688999998553333 344567777777775554422334678899888
Q ss_pred ecc
Q 038123 279 TEV 281 (508)
Q Consensus 279 ~E~ 281 (508)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 654
No 136
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.25 E-value=0.038 Score=55.54 Aligned_cols=94 Identities=13% Similarity=0.156 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEecc-CCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHc
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCG-VLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s-~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
+.+++.+|...+|+++.++.+.||.+|+++. ...-+..++..-+---|.+..+++..+. |+|-+.-.|+...-.||.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 6789999999999999999999999998874 3445566666666667888889999999 9999999999999999999
Q ss_pred CCCCeEEEEEeccCCC
Q 038123 269 YPGSYALVVSTEVVSN 284 (508)
Q Consensus 269 g~~~~aLVVs~E~~S~ 284 (508)
|.++.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9877777777788885
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=93.68 E-value=0.25 Score=51.61 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE-----EEecCccchHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS-----FNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~-----~dl~g~gCs~gl~AL~lA~ 263 (508)
+....+.++++++|+++|++++|||.+++.. +.+.+-..+.+++|++++-.. -+++++++++-..+|.-+.
T Consensus 205 ~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~ 280 (345)
T TIGR00748 205 AYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVL 280 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHH
Confidence 3445566899999999999999999998542 233455668999999743222 2677788888888887665
Q ss_pred HHHHcCCCCeEEEEE
Q 038123 264 DLLNAYPGSYALVVS 278 (508)
Q Consensus 264 ~lL~~g~~~~aLVVs 278 (508)
. +..+++++|+++
T Consensus 281 ~--~~~~Gd~vll~~ 293 (345)
T TIGR00748 281 D--IAEPGDRILAVS 293 (345)
T ss_pred H--hcCCCCEEEEEE
Confidence 4 223445555554
No 138
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.20 E-value=0.3 Score=52.48 Aligned_cols=91 Identities=19% Similarity=0.241 Sum_probs=64.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCc--------cchHHHHHHHHHHHHH
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGM--------GCSAGIIAIDLAKDLL 266 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~--------gCs~gl~AL~lA~~lL 266 (508)
..|++++|+++|++++|||.+.++- ..........+++|+.. ..+|++|- |++|....+.+..+|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 5799999999999999999987541 12334456778888863 45667653 6788778888888887
Q ss_pred HcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 267 NAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
+.+ .++.| ++.|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl--------------------~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGL--------------------VTMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEE--------------------EEEEeeccceeEEEEEe
Confidence 654 34442 23466677788888875
No 139
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.16 E-value=0.39 Score=50.84 Aligned_cols=88 Identities=14% Similarity=0.194 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHc-----CCCCCce---EEEecCccchHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHY-----KLRHNIN---SFNLGGMGCSAGIIAIDL 261 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~l-----gl~~~~~---~~dl~g~gCs~gl~AL~l 261 (508)
......++++++|+++|++++|||.++.. +..+..-..+.++| |++++-. .-++++++|++...+|..
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~H----q~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPH----YSSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeC----cccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 44455888999999999999999999843 23344556677776 7764321 225667788888888876
Q ss_pred HHHHHHcCCCCeEEEEEecc
Q 038123 262 AKDLLNAYPGSYALVVSTEV 281 (508)
Q Consensus 262 A~~lL~~g~~~~aLVVs~E~ 281 (508)
|..-=+..+++++++++.|.
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHcCCCCCCCEEEEEEecc
Confidence 53211123578899888875
No 140
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=92.89 E-value=2 Score=42.09 Aligned_cols=115 Identities=16% Similarity=-0.039 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC----------------CCCCc---------hHHHHHHHcCCCCCce
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL----------------NTTPS---------LSAMVINHYKLRHNIN 243 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~----------------~~~Ps---------~a~~v~~~lgl~~~~~ 243 (508)
....|++.++.+++++. +++|.+|++|..+ ...|. .+.++.-..|. ...
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCc
Confidence 36788889998888652 5678899887522 12341 23444444454 367
Q ss_pred EEEecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCC
Q 038123 244 SFNLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRL 315 (508)
Q Consensus 244 ~~dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~ 315 (508)
...|. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|...... .....--|.|++|++.+.
T Consensus 107 ~tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 78888 48889999999999999999 89999999998665444322111 112234577788886543
No 141
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.16 E-value=0.51 Score=55.67 Aligned_cols=255 Identities=20% Similarity=0.260 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcc----EEEEecc-CC--------------C-CCCchHHHHHHHcC----CCCCceEE
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIR----VLVVNCG-VL--------------N-TTPSLSAMVINHYK----LRHNINSF 245 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId----~LI~~~s-~~--------------~-~~Ps~a~~v~~~lg----l~~~~~~~ 245 (508)
-..|..++.-+++-++||+|.+.. .+.+.|+ +. + .+-..-+|.+||+- ++ -++|
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq--GPS~ 164 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ--GPSF 164 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc--CCch
Confidence 456789999999999999999863 3444432 11 1 11223466777643 43 4778
Q ss_pred EecCccchHHHHHHHHHHHHHHcCCCCeEEEEEeccCCC-C----C-----CC--CC----CccccccccccccceEEEE
Q 038123 246 NLGGMGCSAGIIAIDLAKDLLNAYPGSYALVVSTEVVSN-T----W-----YG--GN----EVDMLLPNCFFRMGAAAVL 309 (508)
Q Consensus 246 dl~g~gCs~gl~AL~lA~~lL~~g~~~~aLVVs~E~~S~-~----~-----~~--~~----dr~~lv~~~lfgDGAaAvL 309 (508)
.+. .+|++.+.|++.|.+-++.+++.+|+|-++..+-. + | .. |. |.+. ....=.||.+|++
T Consensus 165 s~D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~avl 241 (2376)
T KOG1202|consen 165 SVD-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAVL 241 (2376)
T ss_pred hhh-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEEE
Confidence 888 69999999999999999999999999988876432 1 1 11 11 2221 1234469999999
Q ss_pred EeeCCCCccccccceeeEEeeeeccCCccccceeeccCCCCCcccccchhhHHhhhhhhhhhHHhccCcccchhhHHHHH
Q 038123 310 LSSCRLDKWRSKYEFKQLVRTHKGMDNRSFKCMHLKEDAEGRQGLSVSKDMIEVGGHALKANITTLGPLVLPVSEQVHFF 389 (508)
Q Consensus 310 Ls~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~g~~g~~ls~d~~~~~g~al~~~i~~~g~~vlp~se~~~~~ 389 (508)
|.++...++ -|. .++...+.+||- ...|+++.. |+ + |-..+
T Consensus 242 lqrk~~ArR--vYA--tilnartNTDGf------------KEqGvTfP~------G~-----~------------Q~qLi 282 (2376)
T KOG1202|consen 242 LQRKSLARR--VYA--TILNARTNTDGF------------KEQGVTFPS------GD-----M------------QEQLI 282 (2376)
T ss_pred EehhHHHHH--HHH--HhhccccCCCch------------hhcCccCCC------cH-----H------------HHHHH
Confidence 988764321 232 112111223321 111333321 11 0 11224
Q ss_pred HHHHHhcCCCCCcccccccccEEEEcCCCHHHHHH-----HHHHcCCCHHHHHH--hhhhhcccCccccchHHHHHHHHH
Q 038123 390 TNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDE-----IQKNLELTEELMEA--SRKTLERFGNTSSSSVWYELAYLE 462 (508)
Q Consensus 390 ~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~-----v~~~Lgl~~e~~~~--s~~tl~r~GNtsSaSi~~~La~~~ 462 (508)
.+...++|+.| +++-++=.|-.|.++=|- +.+.+--+ +..| --.+-.+-||---||=.-.|+..+
T Consensus 283 ~e~Yse~Gl~P------~sv~YvEAHGtGTkVGDpQEaN~it~~fC~~--Rt~pLLIGSvKSNMGHaEPASGv~alaKil 354 (2376)
T KOG1202|consen 283 RETYSEAGLNP------ESVVYVEAHGTGTKVGDPQEANGITRFFCAT--RTTPLLIGSVKSNMGHAEPASGVCALAKIL 354 (2376)
T ss_pred HHHHHhcCCCc------ccEEEEEeccCCCCCCChHHhhhHHHHHhhc--CCCceEeeeccccCCCCCccchHHHHHHHH
Confidence 46777889999 999999999988766432 22211110 1100 001123456665566555555432
Q ss_pred ---H---------------------hCCCC--------CCCEEEEEeechHHhhhheeEEEeccCC
Q 038123 463 ---A---------------------NAGVK--------RGDRIWQTAFGSGVKCNSVVWKALRNVE 496 (508)
Q Consensus 463 ---~---------------------~gri~--------~Gd~vlliafGsG~~~~sav~r~~~~~~ 496 (508)
+ +||+| +|..|-+=+||-|-+-.-++++.....+
T Consensus 355 lsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~lp~~GGivGiNSFGFGGsN~HviLks~~~~~ 420 (2376)
T KOG1202|consen 355 LSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPLPWRGGIVGINSFGFGGSNAHVILKSNTKPK 420 (2376)
T ss_pred HHHHhCcCCCccccCCCCCCcchhccceeEEecCCCCccCceeeeeccccCCCceeEEeccCCCCC
Confidence 1 24443 4666778889988665556666554444
No 142
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.08 E-value=0.52 Score=48.68 Aligned_cols=87 Identities=13% Similarity=0.178 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHH
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKD 264 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~ 264 (508)
++....+.++.+++|+++|++++|||.+++.. ..+..-..+.+++|++++-... ..+++++++...+|..+
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~-- 308 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA-- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH--
Confidence 34556667789999999999999999988543 2334556889999997433222 25555666666666544
Q ss_pred HHHcC---CCCeEEEEEecc
Q 038123 265 LLNAY---PGSYALVVSTEV 281 (508)
Q Consensus 265 lL~~g---~~~~aLVVs~E~ 281 (508)
++.+ +++++|+++...
T Consensus 309 -~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 -AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred -HHhCCCCCCCEEEEEEech
Confidence 3432 568888887654
No 143
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.06 E-value=0.32 Score=50.03 Aligned_cols=86 Identities=17% Similarity=0.238 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE---EEecCccchHHHHHHHHHHH
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS---FNLGGMGCSAGIIAIDLAKD 264 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~---~dl~g~gCs~gl~AL~lA~~ 264 (508)
+++.+...++++++|+++|++++|||.++.. +..+.+-..+.+++|++++-.. -+.+++++++-..+|+.+
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h----~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPH----QANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeC----CCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 4456667788999999999999999998853 2235566778899999744322 234445555666666433
Q ss_pred HHHc---CCCCeEEEEEec
Q 038123 265 LLNA---YPGSYALVVSTE 280 (508)
Q Consensus 265 lL~~---g~~~~aLVVs~E 280 (508)
++. .+++++|+++.-
T Consensus 297 -~~~~~~~~Gd~vll~~~G 314 (326)
T PRK05963 297 -NLEQPLREGERLLFAAAG 314 (326)
T ss_pred -HHhCCCCCCCEEEEEEEe
Confidence 333 246788887753
No 144
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.36 E-value=0.43 Score=49.15 Aligned_cols=84 Identities=17% Similarity=0.153 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~l 265 (508)
.+.....++++++|+++|++++|||.++.... .......++++||++++.... +.++.+|++...+|.. +
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~---~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFE---A 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHH---H
Confidence 34555678899999999999999999886432 122456889999997543322 3444445555555543 4
Q ss_pred HHcC---CCCeEEEEEe
Q 038123 266 LNAY---PGSYALVVST 279 (508)
Q Consensus 266 L~~g---~~~~aLVVs~ 279 (508)
++.+ +++++|+++.
T Consensus 300 ~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 300 IKQKKVQRGNKILLLGT 316 (329)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 5544 4567777663
No 145
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.22 E-value=0.8 Score=46.78 Aligned_cols=78 Identities=19% Similarity=0.140 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEec-cCCCCCCchHHHHHHHcCCC---CCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVNC-GVLNTTPSLSAMVINHYKLR---HNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~~-s~~~~~Ps~a~~v~~~lgl~---~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+-..++++++|+++|++++|||.++... +......-........++.+ .....-+++++++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 3455799999999999999999998764 33222222233334444431 0112236677788888888888877777
Q ss_pred cC
Q 038123 268 AY 269 (508)
Q Consensus 268 ~g 269 (508)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 65
No 146
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=90.20 E-value=0.74 Score=47.06 Aligned_cols=84 Identities=19% Similarity=0.246 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~l 265 (508)
+......++++++|+++|++++|||.+++.. +.+..-..+++++|++.+-... .+++++|++-+.+|.-+
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 3445567789999999999999999998532 2345667789999997432222 23445556666666443
Q ss_pred HHcC---CCCeEEEEEe
Q 038123 266 LNAY---PGSYALVVST 279 (508)
Q Consensus 266 L~~g---~~~~aLVVs~ 279 (508)
++.+ +++++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3433 4567777764
No 147
>PRK04262 hypothetical protein; Provisional
Probab=90.02 E-value=0.75 Score=47.95 Aligned_cols=68 Identities=10% Similarity=0.166 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE-----EEecCccchHHHHHHHHHH
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS-----FNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~-----~dl~g~gCs~gl~AL~lA~ 263 (508)
....++++++|+++|++++|||.+++. +.-+.+-..++++||++++-.. -+.+++++++-..+|.-+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~H----q~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFH----QPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecC----CCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 456778999999999999999998854 2234455678899999743222 2566666666666665543
No 148
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=89.88 E-value=1.1 Score=47.58 Aligned_cols=92 Identities=11% Similarity=0.070 Sum_probs=57.0
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchH---HHHHHHHHHhC
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSV---WYELAYLEANA 465 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi---~~~La~~~~~g 465 (508)
+.++++++|+++ +|||.+=+|-.-....-...|.||++.+++.+|= -+--+||-..+|= ..+|.+.++.
T Consensus 291 ~~~al~~Agl~~------~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~G-G~la~GHP~GatG~~~~~~l~~qL~~- 362 (388)
T PRK06366 291 TRKLLEKQNKSI------DYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNG-GAVAIGHPIGNSGSRIIVTLINALKT- 362 (388)
T ss_pred HHHHHHHcCCCH------HHcceeeccchhHHHHHHHHHHhCCCCCccCCCC-chhhhCCCcCCCHHHHHHHHHHHHHh-
Confidence 457889999998 9999999999988777777899999877775432 2233566655443 3344433332
Q ss_pred CCCCCCEEE-EEeechHHhhhheeEEE
Q 038123 466 GVKRGDRIW-QTAFGSGVKCNSVVWKA 491 (508)
Q Consensus 466 ri~~Gd~vl-liafGsG~~~~sav~r~ 491 (508)
+.|.+.+ .+..|.|. -.+++++.
T Consensus 363 --~~~~~g~~~~c~~gg~-g~a~~~e~ 386 (388)
T PRK06366 363 --RHMKTGLATLCHGGGG-AHTLTLEM 386 (388)
T ss_pred --cCCCeEEEEEecccCh-hhEEEEEe
Confidence 2223333 33344443 34566654
No 149
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.79 E-value=1.1 Score=46.03 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE---EEecCccchHHHHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS---FNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~---~dl~g~gCs~gl~AL~lA~~lL 266 (508)
+.....++++++|+++|++++|||.+++.. +.+.....+.+++|++.+-.. -++++++|++...+|. .++
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~ 295 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LAL 295 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHH
Confidence 445566788999999999999999998642 335556789999999743221 2445555666666664 335
Q ss_pred HcC---CCCeEEEEEe
Q 038123 267 NAY---PGSYALVVST 279 (508)
Q Consensus 267 ~~g---~~~~aLVVs~ 279 (508)
+.+ +++++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 553 4567777764
No 150
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=89.77 E-value=0.77 Score=48.60 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE---EEecCccchHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS---FNLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~---~dl~g~gCs~gl~AL~lA~~l 265 (508)
.+....-++++++|+++|++++|||.++.... -+.+-..++++||++++-.. -+.+++++++-..+|+-+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~--- 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA--- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---
Confidence 34455667889999999999999998885432 23445668999999754322 255666677777776544
Q ss_pred HHcC---CCCeEEEEEe
Q 038123 266 LNAY---PGSYALVVST 279 (508)
Q Consensus 266 L~~g---~~~~aLVVs~ 279 (508)
++.+ +++++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3433 4567777664
No 151
>PRK06840 hypothetical protein; Validated
Probab=89.35 E-value=1 Score=46.54 Aligned_cols=80 Identities=21% Similarity=0.282 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCce--EEEecCccchHHHHHHHHHHHHHHcC-
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNIN--SFNLGGMGCSAGIIAIDLAKDLLNAY- 269 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~--~~dl~g~gCs~gl~AL~lA~~lL~~g- 269 (508)
...++++++|+++|++++|||.++... .-+..-..+.++||++++-. .-+..+++|++...+|.. +++.+
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~---~~~~~~ 310 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHL---ALEQGK 310 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHH---HHHcCC
Confidence 456899999999999999999987432 22444567899999974221 114555566666666643 34443
Q ss_pred --CCCeEEEEEe
Q 038123 270 --PGSYALVVST 279 (508)
Q Consensus 270 --~~~~aLVVs~ 279 (508)
+++++|+++.
T Consensus 311 ~~~Gd~ill~~~ 322 (339)
T PRK06840 311 LKDGDLVVLVSA 322 (339)
T ss_pred CCCCCEEEEEEE
Confidence 4567777664
No 152
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=88.87 E-value=0.86 Score=46.56 Aligned_cols=84 Identities=18% Similarity=0.172 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~l 265 (508)
.......++.+++|+++|++++|||.++... ..+..-.++.+++|++.+-... +.++++|+.-+..|. ++
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 3445567799999999999999999998643 2345567789999997432222 344455555555553 33
Q ss_pred HHcC---CCCeEEEEEe
Q 038123 266 LNAY---PGSYALVVST 279 (508)
Q Consensus 266 L~~g---~~~~aLVVs~ 279 (508)
++.+ +++++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 4577777765
No 153
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=88.83 E-value=1.7 Score=46.51 Aligned_cols=66 Identities=11% Similarity=-0.059 Sum_probs=42.8
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCH--HHHHHhhhhhcccCccccchHHHHHHHH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTE--ELMEASRKTLERFGNTSSSSVWYELAYL 461 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~--e~~~~s~~tl~r~GNtsSaSi~~~La~~ 461 (508)
+..+++++|+++ +|||.+=+|-.-....-...+.||+.. .++.++ --+--+||...++=...+.++
T Consensus 302 ~~~a~~~agl~~------~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el 369 (401)
T PRK08131 302 IKKALARAGLTL------DDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTA 369 (401)
T ss_pred HHHHHHHcCCCH------HHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHH
Confidence 446888999998 999999999876655445678899853 233211 112247888766544444443
No 154
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=88.34 E-value=0.63 Score=41.55 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=55.0
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHhCCCC
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEANAGVK 468 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~gri~ 468 (508)
+.++++++|+++ +|||.|=+|-.-....-...+.||++++++.++=-.+ -+||...+|=...+.++..+-+-+
T Consensus 28 ~~~al~~ag~~~------~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~l-a~GHP~gasG~r~~~~l~~~L~~~ 100 (123)
T PF02803_consen 28 ARKALERAGLTP------DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGAL-ALGHPLGASGARLVVELAHQLRRR 100 (123)
T ss_dssp HHHHHHHHT--G------GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HH-HH-BHTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCc------cccchhhccchhhhHHHHhhccccccccccCcccccc-cccccccccccchhhhhHHHHHHh
Confidence 447888999998 9999999999999888888999999998875432222 278876665444333333221113
Q ss_pred CCCEEEE-EeechHHhhhheeEE
Q 038123 469 RGDRIWQ-TAFGSGVKCNSVVWK 490 (508)
Q Consensus 469 ~Gd~vll-iafGsG~~~~sav~r 490 (508)
.|++.+. +..|.|. -.+++++
T Consensus 101 ~~~~gla~~~~ggG~-g~a~lle 122 (123)
T PF02803_consen 101 GGRYGLAAICAGGGQ-GSAVLLE 122 (123)
T ss_dssp TTSEEEEEEEETTTE-EEEEEEE
T ss_pred chhhhhHHhccccee-eEEEEEE
Confidence 4566554 3344443 3344443
No 155
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=88.23 E-value=1.3 Score=44.98 Aligned_cols=85 Identities=18% Similarity=0.227 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHH
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKD 264 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~ 264 (508)
+...+...++++++|+++|++++|||.++... +.+..-..+.+++|++++-... +++++++++...+|.-+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34556677899999999999999999988542 2344556789999997432222 23445555555555433
Q ss_pred HHHcC---CCCeEEEEEe
Q 038123 265 LLNAY---PGSYALVVST 279 (508)
Q Consensus 265 lL~~g---~~~~aLVVs~ 279 (508)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3443 5788888775
No 156
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=88.16 E-value=2.1 Score=41.74 Aligned_cols=78 Identities=18% Similarity=0.108 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC---CCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR---HNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~---~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
....++++++|+++|++++|||.++.. +.................+.+ .....-.+.+++++++...+..+..-++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 445678999999999999999998765 333222222222222333331 0112235566677777777766655555
Q ss_pred cC
Q 038123 268 AY 269 (508)
Q Consensus 268 ~g 269 (508)
..
T Consensus 225 ~~ 226 (254)
T cd00327 225 HE 226 (254)
T ss_pred CC
Confidence 54
No 157
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=87.77 E-value=2.1 Score=45.81 Aligned_cols=94 Identities=20% Similarity=0.208 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCc--------cchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGM--------GCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~--------gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+-++ .......-...+.||+..+-..+|.+|- |++|....+.++.+|
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL 373 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHH
Confidence 3689999999999999999987632 1223334556678888433356777652 344555556666666
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-+. ..++.|+ +.|.-|..+.|+||++
T Consensus 374 ~~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 374 ERT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hhc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 432 2334332 3456667777788775
No 158
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=87.46 E-value=1.3 Score=47.28 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=57.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCc--------cchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGM--------GCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~--------gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||++-++ ...+...-...+.||+.++-..+|.+|- |++|....++++.+|
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL 374 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL 374 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence 3579999999999999999987632 1233334456678898543456777752 333444455566665
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-..+ .++.| ++.|.-|-.+.|+|+++
T Consensus 375 r~~~-~~~g~--------------------~~~c~~gG~g~a~~~e~ 400 (401)
T PRK09050 375 ERTG-GRYAL--------------------CTMCIGVGQGIALAIER 400 (401)
T ss_pred HhcC-CCeEE--------------------EEEcccccceeEEEEEe
Confidence 4322 23332 23455566677777764
No 159
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.23 E-value=1.8 Score=45.52 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHH-cCCCC-Cce----EEEecCccchHHHHHHHH
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINH-YKLRH-NIN----SFNLGGMGCSAGIIAIDL 261 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~-lgl~~-~~~----~~dl~g~gCs~gl~AL~l 261 (508)
+++.+.+.++++++|+++|++++|||.++..-. .+.+-..+.++ +|+.. .-. --+.++++|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~----~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQA----NINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 456667889999999999999999999886522 11222334555 56431 111 225667788888888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 038123 262 AKDLLNAYPGSYALVVST 279 (508)
Q Consensus 262 A~~lL~~g~~~~aLVVs~ 279 (508)
+..-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64432 35677777764
No 160
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=87.05 E-value=1.8 Score=44.56 Aligned_cols=81 Identities=14% Similarity=0.193 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEE---EecCccchHHHHHHHHHHHHHHc
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSF---NLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~---dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
...-++++++|+++|++++|||.+++... -+.....+.++||++++-... +.++++|++...+|.-+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 44566789999999999999999885432 234556789999997432222 44556666666666544 344
Q ss_pred C---CCCeEEEEEe
Q 038123 269 Y---PGSYALVVST 279 (508)
Q Consensus 269 g---~~~~aLVVs~ 279 (508)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4677777764
No 161
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=86.87 E-value=1.4 Score=47.18 Aligned_cols=91 Identities=19% Similarity=0.261 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHHH
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~lL 266 (508)
..|++++|+++|++++|||.+=++ ...+...-...+.||+.+ ..+|++| .|++|....+.++..|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 469999999999999999988753 223344455677888753 3456654 24444555555555554
Q ss_pred HcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 267 NAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 267 ~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
+.+ .++.| .+.|.=|-.+.|+||++
T Consensus 377 ~~~-~~~g~--------------------~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTAL--------------------ITLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 322 23332 34567777888888875
No 162
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=85.37 E-value=2.6 Score=45.15 Aligned_cols=70 Identities=19% Similarity=0.230 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCc--------cchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGM--------GCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~--------gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+-++ ...+...-+..+.||+..+-..+|.+|- |++|....++++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 3579999999999999999987632 2233445556778898544456777651 234445556666666
Q ss_pred HH
Q 038123 266 LN 267 (508)
Q Consensus 266 L~ 267 (508)
-.
T Consensus 374 r~ 375 (400)
T TIGR02430 374 ER 375 (400)
T ss_pred Hh
Confidence 43
No 163
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=84.69 E-value=2.1 Score=44.86 Aligned_cols=87 Identities=17% Similarity=0.208 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCC-Cc----eEEEecCccchHHHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRH-NI----NSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~-~~----~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..++++++|+++|++|+|||.|+.. ++..+.....+..+..-+|-.. .. +.-.+...+.++|...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999998854 4332222222333444444211 11 1122333445555555656666666
Q ss_pred cC--CCCeEEEEEec
Q 038123 268 AY--PGSYALVVSTE 280 (508)
Q Consensus 268 ~g--~~~~aLVVs~E 280 (508)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46789998854
No 164
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=84.30 E-value=5.7 Score=35.44 Aligned_cols=70 Identities=21% Similarity=0.293 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++++|||.+=++- .+....-...+.+|+.+ ..+|.+| .||+|...-+.++.+|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 36799999999999999999886552 12233445667777753 3455554 3677778888888888
Q ss_pred HHcC
Q 038123 266 LNAY 269 (508)
Q Consensus 266 L~~g 269 (508)
-+.+
T Consensus 98 ~~~~ 101 (123)
T PF02803_consen 98 RRRG 101 (123)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 6653
No 165
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=83.32 E-value=1.8 Score=44.95 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE--EEecCccchHHHHHHHHHH
Q 038123 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS--FNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~--~dl~g~gCs~gl~AL~lA~ 263 (508)
.-+.+..++.++++++|++++++++|||.+|. .+.-..+-..+++++|++++-.. ++-.| ..++..+-|.+..
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vp----HQan~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~~ 291 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVP----HQANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALDE 291 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcc----ccccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHHH
Confidence 45678999999999999999999999999983 33344566789999999644333 33333 3333333333332
Q ss_pred HHHHcC---CCCeEEEEE
Q 038123 264 DLLNAY---PGSYALVVS 278 (508)
Q Consensus 264 ~lL~~g---~~~~aLVVs 278 (508)
. ++.+ +++++|+++
T Consensus 292 ~-~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 292 A-LREGRIKPGDLVLLEA 308 (323)
T ss_pred H-hhhCCCCCCCEEEEEe
Confidence 2 2333 345565554
No 166
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=82.95 E-value=4.7 Score=43.47 Aligned_cols=26 Identities=15% Similarity=0.026 Sum_probs=21.8
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKK 420 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~ 420 (508)
+.++++++|+++ +|||.+-+|-.-..
T Consensus 313 ~~~al~~aGl~~------~did~~ei~daFa~ 338 (426)
T PRK08170 313 ATPLLQRHGLTL------EDLDLWEINEAFAA 338 (426)
T ss_pred HHHHHHHcCCCH------HHcCEEEecchhHH
Confidence 457889999998 99999999987553
No 167
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=82.81 E-value=4.5 Score=43.26 Aligned_cols=93 Identities=19% Similarity=0.226 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKD 264 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~ 264 (508)
-...|++++|+++|++|+|||++-++ .......-...+.||+.. ..+|.+| .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 34689999999999999999988632 122333444567788752 2344443 144555555555555
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 265 LLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 265 lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
|-+.+ .++. +.+.|.-|-.++|+||++
T Consensus 372 L~~~~-~~~g--------------------~~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 372 LRRTN-LKYG--------------------MVTMCVGTGMGAAGIFER 398 (399)
T ss_pred HHhcC-CCeE--------------------EEEEcccCCceeEEEEEe
Confidence 54322 2232 223466677777788774
No 168
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=82.15 E-value=7.3 Score=41.48 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||++=++- ..+...-+..+.+|+.. ..+|.+| .||+|....+.++.+|
T Consensus 287 ~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL 360 (387)
T PRK07850 287 PVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHEL 360 (387)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHHH
Confidence 46899999999999999999886541 12223334446787753 3566665 1334444556666666
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-+. ..++.| .+.|.-|..++|+||++
T Consensus 361 ~~~-~~~~g~--------------------~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 361 ERT-DKSTAL--------------------ITMCAGGALSTGTIIER 386 (387)
T ss_pred Hhc-CCCeEE--------------------EEEccccCceeEEEEEe
Confidence 443 233333 23466677777888775
No 169
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=82.06 E-value=2.2 Score=45.71 Aligned_cols=94 Identities=19% Similarity=0.289 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCC-ceEEEecC--------ccchHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHN-INSFNLGG--------MGCSAGIIAIDLAKD 264 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~-~~~~dl~g--------~gCs~gl~AL~lA~~ 264 (508)
...|++++|+++|++|+|||.+-++ ...+...-+..+.||+.++ ...+|.+| .|++|...-+.++.+
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~----d~f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~q 375 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELN----EAFAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRE 375 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeec----cHHHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHH
Confidence 3679999999999999999988643 1123333445566776531 01356664 133333344445555
Q ss_pred HHHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 265 LLNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 265 lL~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
|-+.+ .++ .+++.|.-|..+.|+||++
T Consensus 376 L~~~~-~~~--------------------gl~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 376 LQRRQ-ARY--------------------GLETMCIGGGQGLAAVFER 402 (404)
T ss_pred HHhcC-CCe--------------------EEEEEeccCChhhEEEEEe
Confidence 53321 222 2334577778888888875
No 170
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=81.72 E-value=2.7 Score=44.77 Aligned_cols=50 Identities=14% Similarity=0.089 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG 249 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g 249 (508)
...|++++|+++|++|+|||.+-++- ..+...-...+.||+.. ..+|++|
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC
Confidence 35799999999999999999987531 13344455667788742 2345553
No 171
>PRK09051 beta-ketothiolase; Provisional
Probab=81.40 E-value=3 Score=44.51 Aligned_cols=92 Identities=21% Similarity=0.277 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCc--------cchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGM--------GCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~--------gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+=++ ...+...-...+.||+.+ ..+|.+|- |++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~----d~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEAN----EAFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec----CccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 3679999999999999999988653 123444556678899852 45666651 233334444445544
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-+.+ .++. +.+.|.-|-.+.|+||++
T Consensus 368 ~~~~-~~~g--------------------~~~~c~~gG~g~a~~~e~ 393 (394)
T PRK09051 368 QRIG-GRYA--------------------LVTMCIGGGQGIAAIFER 393 (394)
T ss_pred HhcC-CCEE--------------------EEEEccccChhhEEEEEe
Confidence 3321 2232 223466666677777765
No 172
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=81.30 E-value=4.3 Score=43.22 Aligned_cols=67 Identities=22% Similarity=0.279 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+=++- ..+...-+..+.||+.+ ..+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999886432 23344455667788753 2455554 2566666667777777
Q ss_pred H
Q 038123 266 L 266 (508)
Q Consensus 266 L 266 (508)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 4
No 173
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=80.79 E-value=5.5 Score=39.05 Aligned_cols=59 Identities=22% Similarity=0.242 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-chHHHHHHHcCCCCCceEEEecC
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP-SLSAMVINHYKLRHNINSFNLGG 249 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P-s~a~~v~~~lgl~~~~~~~dl~g 249 (508)
.+.....++++|+++|++++|+|.|+|++.|+..+- -++.-++.-|.+.-+++.+.++.
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 455677999999999999999999999999876554 23344444455555678888884
No 174
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=80.52 E-value=8.1 Score=40.81 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEec--------CccchHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLG--------GMGCSAGIIAIDLAKD 264 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~--------g~gCs~gl~AL~lA~~ 264 (508)
-...|++++|+++|++|+|||.+..+ ...........+.+|+.. ..+|.+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~----eafa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEIN----EAFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeec----chhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 35779999999999999999998653 122334455667788853 244444 1366777777777777
Q ss_pred HHHc
Q 038123 265 LLNA 268 (508)
Q Consensus 265 lL~~ 268 (508)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7554
No 175
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=80.40 E-value=2.4 Score=45.24 Aligned_cols=92 Identities=21% Similarity=0.294 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+=++ .......-.-.+.||+.. ..+|++| .|++|....+.++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~----d~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEIN----EAFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehh----hHHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 3679999999999999999988432 111112222346688753 3455554 2344445555555555
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-..+ .++. +.+.|.-|-.++|+||++
T Consensus 371 ~~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 371 RARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred HhcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 3322 2222 334566677777788764
No 176
>PLN02287 3-ketoacyl-CoA thiolase
Probab=80.36 E-value=3.7 Score=44.69 Aligned_cols=96 Identities=16% Similarity=0.180 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+=++ .......-+-.+.||+.+ ..+|++| .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998543 112222233456777742 3455443 2555666666666666
Q ss_pred HHcCC-CCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEeeCCC
Q 038123 266 LNAYP-GSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSSCRL 315 (508)
Q Consensus 266 L~~g~-~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~~~~ 315 (508)
-+.+. .++. +.+.|.-|--++|+||++.+.
T Consensus 407 ~~~~~~~~~g--------------------l~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFG--------------------VVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCee--------------------EEEEccccCceeEEEEEecCc
Confidence 54331 0232 334577778888999998764
No 177
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=80.10 E-value=5 Score=43.01 Aligned_cols=92 Identities=17% Similarity=0.238 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++++++|++|+|||.+=.. ...+...-+-.+.||+.++ .+|.+| .||++....+.+..+|
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~~~--pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL 378 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGIDED--KLNVSGGAIALGHPFGMTGARITTTLLNNL 378 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCCcc--ccCCCCChHhhcCcHHHHHHHHHHHHHHHH
Confidence 4579999999999999999988321 1122333334467777421 333332 2555555566666666
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-+ .+.++.| .+.|.-|..++|+||++
T Consensus 379 ~~-~~~~~g~--------------------~~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 379 QT-HDKTFGL--------------------ETMCVGGGQGMAMVLER 404 (406)
T ss_pred Hh-cCCCeEE--------------------EEEccccChhhEEEEEe
Confidence 43 2233333 23466677778888875
No 178
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=79.93 E-value=4.1 Score=42.60 Aligned_cols=88 Identities=15% Similarity=0.069 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCc------eEEEecCccchHHHHHH
Q 038123 188 EEAAMVLFGAIDDLLAAT--KIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNI------NSFNLGGMGCSAGIIAI 259 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~a--gi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~------~~~dl~g~gCs~gl~AL 259 (508)
+.+.....++++++|+++ |++++|||.+++... .+..-..+.+++|++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 345566778899999999 999999999886532 223445688899987432 12366777777777777
Q ss_pred HHHHHHHHcCCCCeEEEEEe
Q 038123 260 DLAKDLLNAYPGSYALVVST 279 (508)
Q Consensus 260 ~lA~~lL~~g~~~~aLVVs~ 279 (508)
.-+.+-=+..+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 65543111124677777764
No 179
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=79.59 E-value=3.1 Score=44.36 Aligned_cols=69 Identities=13% Similarity=-0.062 Sum_probs=46.9
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCH------------------HHHHHhhhhhcccCcc
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTE------------------ELMEASRKTLERFGNT 449 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~------------------e~~~~s~~tl~r~GNt 449 (508)
.+.++++++|+++ +|||.+=+|-.-...--...+.||+.+ ..+.+| --+--+||-
T Consensus 274 A~~~al~~Agi~~------~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la~GhP 346 (393)
T cd00826 274 AARKALEKAGLGI------GDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN-GGAIAIGHP 346 (393)
T ss_pred HHHHHHHHcCCCH------HHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCC-CchhhcCCC
Confidence 3457889999998 999999999987766666778999875 222111 112237888
Q ss_pred ccchHHHHHHHHHH
Q 038123 450 SSSSVWYELAYLEA 463 (508)
Q Consensus 450 sSaSi~~~La~~~~ 463 (508)
..+|=...+.++..
T Consensus 347 ~gAtG~~~~~e~~~ 360 (393)
T cd00826 347 IGASGAAICAELCF 360 (393)
T ss_pred ccccHHHHHHHHHH
Confidence 76666555555443
No 180
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=78.36 E-value=12 Score=40.64 Aligned_cols=39 Identities=13% Similarity=0.027 Sum_probs=33.6
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTE 433 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~ 433 (508)
+.++++++|+++ +|||.+=+|-.-....-...+.||+.+
T Consensus 315 ~~~a~~~AGl~~------~DiD~~Ei~daFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 315 AQKALSMAGVKP------SDLQVAEVHDCFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHcCCCH------HHCcEeeecccChHHHHHHHHHcCCCC
Confidence 457889999998 999999999998777777789999876
No 181
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=78.24 E-value=7.6 Score=41.07 Aligned_cols=83 Identities=17% Similarity=0.193 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC-----CCceEE-EecCccchHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR-----HNINSF-NLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~-----~~~~~~-dl~g~gCs~gl~AL~lA~ 263 (508)
-..-...|+++.+++.|.+|+|.|.+++.. |.|-+....+..++.+ +..... .++++.|++...+| |.
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as 280 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--AS 280 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HH
Confidence 445567899999999999999999998643 4455555666666654 333333 58888999888665 44
Q ss_pred HHHHcC-CCCeEEEEE
Q 038123 264 DLLNAY-PGSYALVVS 278 (508)
Q Consensus 264 ~lL~~g-~~~~aLVVs 278 (508)
-|=++. +++++|+++
T Consensus 281 ~L~~a~~~G~rIl~~S 296 (377)
T COG3425 281 LLDNAKLPGDRILLFS 296 (377)
T ss_pred HHhhcCCCCCEEEEEe
Confidence 444444 566776654
No 182
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.19 E-value=4.7 Score=42.32 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE-E--E-ecCccchHHHHHHHHHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS-F--N-LGGMGCSAGIIAIDLAKD 264 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~-~--d-l~g~gCs~gl~AL~lA~~ 264 (508)
.+....-.+++++|+++|++++|||.+++.- .-+.+-..+.++||++++-.. . + .++++.++...+|+-+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~-- 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL-- 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH--
Confidence 4555567789999999999999999999642 234456789999999753221 1 2 4455666666666533
Q ss_pred HHHcCCCCeEEEEE
Q 038123 265 LLNAYPGSYALVVS 278 (508)
Q Consensus 265 lL~~g~~~~aLVVs 278 (508)
++.++.+ +|+++
T Consensus 313 -~~~~~~~-~ll~~ 324 (353)
T PRK12880 313 -DTPKEFK-ASLSA 324 (353)
T ss_pred -HHcCCcE-EEEEE
Confidence 4444433 44433
No 183
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=78.01 E-value=3.3 Score=44.19 Aligned_cols=92 Identities=21% Similarity=0.334 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+-++ ...+...-.-.+.||+.+ ..+|.+| .|++|....+.++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~----d~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELN----EAFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC----CHHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999988743 112233333445777642 2334443 2555556666666666
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-+.+ .++.| .+.|.-|..+.|+||++
T Consensus 365 ~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFGI--------------------VTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeEE--------------------EEEccccChhhEEEEEe
Confidence 5533 23332 23466667777777764
No 184
>PLN03169 chalcone synthase family protein; Provisional
Probab=77.40 E-value=7.2 Score=41.56 Aligned_cols=88 Identities=11% Similarity=0.140 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceE------EEecCccchHHHHHHHHHH
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINS------FNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~------~dl~g~gCs~gl~AL~lA~ 263 (508)
+..-.-+.++++|+++|++++|||.+.+...+. -..+-..++++||++++-.. -+.+++++++-..+|+.+.
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~ 356 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR 356 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHH
Confidence 445556677999999999999998443322222 24566778999999754322 3677788888888887654
Q ss_pred HH--HH-cCCCCeEEEEEe
Q 038123 264 DL--LN-AYPGSYALVVST 279 (508)
Q Consensus 264 ~l--L~-~g~~~~aLVVs~ 279 (508)
.- ++ ..+++++|+++.
T Consensus 357 ~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 357 EELKKKGEEDEEWGLILAF 375 (391)
T ss_pred HhhcccCCCCCcEEEEEEE
Confidence 21 11 113466666653
No 185
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=77.24 E-value=4.4 Score=43.22 Aligned_cols=68 Identities=22% Similarity=0.277 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||++-++ ...+...-+..+.||+.+ ..+|.+| .||+|....+.++.+|
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL 366 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDP--EKVNVNGGAVALGHPIGASGARIIVTLIHEL 366 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCc--ccCCcCCchHHhCCcHHHHHHHHHHHHHHHH
Confidence 4579999999999999999988532 223334455667888752 2445543 2455555666666666
Q ss_pred HH
Q 038123 266 LN 267 (508)
Q Consensus 266 L~ 267 (508)
-.
T Consensus 367 ~~ 368 (393)
T PRK08235 367 KR 368 (393)
T ss_pred Hh
Confidence 53
No 186
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=76.13 E-value=9.6 Score=38.75 Aligned_cols=88 Identities=15% Similarity=0.121 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-chHHHHHHHcCCCC-Cce------EEEecCccchHHHH
Q 038123 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP-SLSAMVINHYKLRH-NIN------SFNLGGMGCSAGII 257 (508)
Q Consensus 186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P-s~a~~v~~~lgl~~-~~~------~~dl~g~gCs~gl~ 257 (508)
..+.+.....++++++|++.|++ +|||.++.... -+ ..-..+.++++++. ++. .-++++++|++...
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~ 291 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQP----NGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILL 291 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCc----hHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHH
Confidence 44567777889999999999999 99998774422 22 55677888998741 121 23455566666666
Q ss_pred HHHHHHHHHHcC---CCCeEEEEEecc
Q 038123 258 AIDLAKDLLNAY---PGSYALVVSTEV 281 (508)
Q Consensus 258 AL~lA~~lL~~g---~~~~aLVVs~E~ 281 (508)
+|.-+ ++.+ +++++|+++.-.
T Consensus 292 ~L~~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 292 GLASL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHH---HhcCCCCCCCEEEEEEecc
Confidence 66544 3333 467888887653
No 187
>PRK07855 lipid-transfer protein; Provisional
Probab=74.64 E-value=14 Score=39.24 Aligned_cols=40 Identities=8% Similarity=0.042 Sum_probs=32.5
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEE 434 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e 434 (508)
+.++++++|+++ +|||.+-+|-.-...--...+.||+.+.
T Consensus 272 a~~a~~~AGi~~------~DiDv~El~D~Ft~~~l~~~E~lG~~~~ 311 (386)
T PRK07855 272 ARQLWAQSGLGP------ADIDTAILYDHFTPFVLMQLEELGFCGR 311 (386)
T ss_pred HHHHHHHcCCCH------HHCcEEEeccCCcHHHHHHHHHcCCCCC
Confidence 457888999998 9999999998877666667788888644
No 188
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=74.38 E-value=5.9 Score=42.14 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
...|++++++++|++|+|||.+=++ .......-...+.||+-
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~----daFa~~~l~~~e~lg~~ 323 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELN----EAFAAQALPCLKDLGLL 323 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCC
Confidence 4678999999999999999987553 12233344455777763
No 189
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=73.52 E-value=6 Score=42.08 Aligned_cols=70 Identities=23% Similarity=0.318 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCc-eEEEecC--------ccchHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNI-NSFNLGG--------MGCSAGIIAIDLAKD 264 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~-~~~dl~g--------~gCs~gl~AL~lA~~ 264 (508)
...|++++++++|++|+|||.+=++ ...+...-+..+.||+.+.. ..+|.+| .||+|....+.++..
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~----d~F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~ 359 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELN----EAFAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNL 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----ccchHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHH
Confidence 3678899999999999999988643 12233444556677773221 2445443 255555555555555
Q ss_pred HHH
Q 038123 265 LLN 267 (508)
Q Consensus 265 lL~ 267 (508)
|-+
T Consensus 360 L~~ 362 (387)
T PRK08947 360 MER 362 (387)
T ss_pred HHh
Confidence 543
No 190
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=73.27 E-value=16 Score=38.94 Aligned_cols=68 Identities=12% Similarity=-0.000 Sum_probs=45.7
Q ss_pred HHHHHHhcCCC--CCcccccccccEEEEcCCCHHHHHHHHHHcCCCHH------------------HHHHhhhhhcccCc
Q 038123 389 FTNLLLKKKTK--PYIPDYKQAFEHICILATSKKVLDEIQKNLELTEE------------------LMEASRKTLERFGN 448 (508)
Q Consensus 389 ~~~~l~~~gl~--~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e------------------~~~~s~~tl~r~GN 448 (508)
+..+++++|++ + +|||.+=+|-.-....-...+.||+.+. .+.+| -=+--+||
T Consensus 272 a~~a~~~AGl~~~~------~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~-GG~la~Gh 344 (398)
T PRK06157 272 ARKAYREAGITDPR------EELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQID-GGLKCFGH 344 (398)
T ss_pred HHHHHHHcCCCCch------hcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCC-CCcccCCC
Confidence 44678899997 5 8999999999877666677788998762 12110 11124789
Q ss_pred cccchHHHHHHHHHH
Q 038123 449 TSSSSVWYELAYLEA 463 (508)
Q Consensus 449 tsSaSi~~~La~~~~ 463 (508)
...++=...+.++..
T Consensus 345 p~gatG~~~~~e~~~ 359 (398)
T PRK06157 345 PIGASGLRMLYEMYL 359 (398)
T ss_pred cccHhHHHHHHHHHH
Confidence 877666555555544
No 191
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=72.36 E-value=7.4 Score=41.21 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHHH
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~lL 266 (508)
..|++++++++|+.|+|||.+=++ .......-+..+.||+.+ ..+|.+| .|++|....+.++.+|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 469999999999999999988433 122333445577788763 3566665 13333344455555554
Q ss_pred H
Q 038123 267 N 267 (508)
Q Consensus 267 ~ 267 (508)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 3
No 192
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=71.14 E-value=12 Score=41.40 Aligned_cols=79 Identities=24% Similarity=0.276 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCchHHHHHHHcCCCCC-ceEEEecCccchH--------HHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVV-NCGVLNTTPSLSAMVINHYKLRHN-INSFNLGGMGCSA--------GIIAIDLAK 263 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~-~~s~~~~~Ps~a~~v~~~lgl~~~-~~~~dl~g~gCs~--------gl~AL~lA~ 263 (508)
+..|++++++++|++++|||++=+ .| .|...-+..+.||+.++ -..+|++| |.-+ ++.++--+.
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc-----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v 367 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC-----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMV 367 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC-----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHH
Confidence 346999999999999999998853 23 24444556788998643 23566664 4432 344433333
Q ss_pred HHHHcCCCCeEEEEE
Q 038123 264 DLLNAYPGSYALVVS 278 (508)
Q Consensus 264 ~lL~~g~~~~aLVVs 278 (508)
.-|+..+.+++||.+
T Consensus 368 ~QLRg~~~~~gLv~~ 382 (498)
T PRK08257 368 ERLRANPGRRGLVTA 382 (498)
T ss_pred HHHhhcCCCEEEEEC
Confidence 333333345555543
No 193
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=70.77 E-value=8 Score=37.62 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=29.7
Q ss_pred cCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhhe
Q 038123 446 FGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNSV 487 (508)
Q Consensus 446 ~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~sa 487 (508)
.|+-.+.|.|...+.+++.=.+++|++|+=+|-|+|+..+.+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 455567777888888888778999999999999999875443
No 194
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=70.58 E-value=4 Score=43.55 Aligned_cols=92 Identities=16% Similarity=0.166 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++|+++|++|+|||.+-++ .......-...+.||+.+ ..+|++| .|++|....+.++..|
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~----eafa~~~l~~~e~lg~~~--~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l 365 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELN----EAFAVQVLYCRDTLGIPM--DRLNVNGGAIAVGHPYGVSGARLTGHALIEG 365 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhh----hHHHHHHHHHHHhcCCCc--cccCCCCChHHhCcchhhhHHHHHHHHHHHH
Confidence 4689999999999999999987532 011111222345677642 3455554 2344445555555555
Q ss_pred HHcCCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEEEEee
Q 038123 266 LNAYPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAVLLSS 312 (508)
Q Consensus 266 L~~g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAvLLs~ 312 (508)
-+.+ .++. +.+.|.-|-.++|+||++
T Consensus 366 ~~~~-~~~g--------------------~~~~c~~gg~g~a~~ie~ 391 (392)
T PRK07108 366 KRRG-AKYV--------------------VVTMCIGGGQGAAGLFEV 391 (392)
T ss_pred HhhC-CCEE--------------------EEEEccccChhhEEEEEe
Confidence 3322 2232 223455566667777764
No 195
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=70.30 E-value=7.2 Score=41.32 Aligned_cols=42 Identities=17% Similarity=0.219 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
...+++++++++|++|+|||.+-.. ...+...-+..+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEIN----EAFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEee----chhHHHHHHHHHHhCCC
Confidence 3589999999999999999987643 11122334456778875
No 196
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=69.33 E-value=11 Score=40.22 Aligned_cols=53 Identities=19% Similarity=0.227 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccch
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCS 253 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs 253 (508)
...|++++++++|++|+|||++=++- ..+...-+..+.||+.+ ..+|.+| |.-
T Consensus 290 ~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~--~pvN~~G-G~l 342 (390)
T PRK06504 290 PLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP--ERLNVNG-GAI 342 (390)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC--CCcCCCC-cHH
Confidence 45699999999999999999885431 22333446678889864 2467765 443
No 197
>PRK05790 putative acyltransferase; Provisional
Probab=68.72 E-value=8.9 Score=40.73 Aligned_cols=68 Identities=19% Similarity=0.274 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~l 265 (508)
...|++++++++|++|+|||.+-++ .......-+..+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEIN----EAFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 3579999999999999999988642 112333445567788642 2334443 2455555666666665
Q ss_pred HH
Q 038123 266 LN 267 (508)
Q Consensus 266 L~ 267 (508)
-.
T Consensus 367 ~~ 368 (393)
T PRK05790 367 KR 368 (393)
T ss_pred Hh
Confidence 54
No 198
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=68.24 E-value=12 Score=39.53 Aligned_cols=73 Identities=8% Similarity=0.055 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCc-hHHHHHHHcCCCCC-----------ceEEEecCccchHHH
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPS-LSAMVINHYKLRHN-----------INSFNLGGMGCSAGI 256 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps-~a~~v~~~lgl~~~-----------~~~~dl~g~gCs~gl 256 (508)
...+...++.+++|+++|++++|||.+++.. ++..++- .-..+.++++.+.+ ...=.+++++|++-.
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~-p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~ 280 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHV-PFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLY 280 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECC-CCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHH
Confidence 3455567889999999999999999988654 2111211 11234455655411 112266666777777
Q ss_pred HHHHHH
Q 038123 257 IAIDLA 262 (508)
Q Consensus 257 ~AL~lA 262 (508)
.+|.-+
T Consensus 281 l~L~~~ 286 (379)
T TIGR01835 281 LGLASL 286 (379)
T ss_pred HHHHHH
Confidence 666533
No 199
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=66.23 E-value=5.4 Score=34.84 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=39.7
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHH-----HHcCCCHH--HHHHhhhhhcccCccccchHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQ-----KNLELTEE--LMEASRKTLERFGNTSSSSVWYELAY 460 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~-----~~Lgl~~e--~~~~s~~tl~r~GNtsSaSi~~~La~ 460 (508)
.+.+.|+++++++ +|||++..|..+....|..+ +.++-... .+. -...=..+||+.+++-.+.|..
T Consensus 30 ~i~~al~~agi~~------~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~-v~s~K~~~Gh~~~asG~~~l~~ 102 (119)
T PF02801_consen 30 AIRRALADAGISP------EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP-VGSVKSNIGHTEAASGLLSLAK 102 (119)
T ss_dssp HHHHHHHHHTS-G------GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE-EE-THHHH-B-GGGHHHHHHHH
T ss_pred HHHHHHhhhcccc------ccceeeeeeccccccchhhhhhhhhhhhcccccccccc-eeccccccccccccchHHHHHH
Confidence 3457888999998 99999999999999877654 33332210 010 0122355999999999888875
Q ss_pred H
Q 038123 461 L 461 (508)
Q Consensus 461 ~ 461 (508)
.
T Consensus 103 ~ 103 (119)
T PF02801_consen 103 A 103 (119)
T ss_dssp H
T ss_pred H
Confidence 4
No 200
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=66.08 E-value=2.1 Score=37.44 Aligned_cols=76 Identities=20% Similarity=0.214 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCC---CceEE----EecCccchHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRH---NINSF----NLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~---~~~~~----dl~g~gCs~gl~AL~lA~~l 265 (508)
..++++++|+++|++|+|||.|... ++...-.+.-+.-+.+-|+-.. .++.- .++....++++.+|..+--.
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 4778999999999999999988754 4332223333444555555321 13222 23334667777777777777
Q ss_pred HHcC
Q 038123 266 LNAY 269 (508)
Q Consensus 266 L~~g 269 (508)
++.+
T Consensus 107 l~~~ 110 (119)
T PF02801_consen 107 LEHG 110 (119)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 7654
No 201
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=65.35 E-value=15 Score=38.93 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCCCceEEEecC
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRHNINSFNLGG 249 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g 249 (508)
..|++++++++|++|+|||.+-+. |. +...-+..+.||+. ...+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d~f-----a~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINEAF-----AAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcchh-----HHHHHHHHHHhCCC--hhhcCCCC
Confidence 589999999999999999988433 21 22233445778874 23455554
No 202
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=65.22 E-value=22 Score=37.25 Aligned_cols=43 Identities=14% Similarity=0.054 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRH 240 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~ 240 (508)
...|++++|+++|++++|||++=++. ..+...-+..+.||+.+
T Consensus 253 ~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 253 ARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 46799999999999999999886542 12334455667777764
No 203
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=65.01 E-value=34 Score=37.01 Aligned_cols=27 Identities=19% Similarity=0.158 Sum_probs=22.1
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKV 421 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~v 421 (508)
+..+++++|+++ +|||.+=+|-.-...
T Consensus 315 ~~~a~~~AGl~~------~Did~~Ei~d~Fa~~ 341 (427)
T PRK09268 315 VPRLLARNGLTL------QDFDFYEIHEAFASQ 341 (427)
T ss_pred HHHHHHHcCCCH------HHCCEEEeccccHHH
Confidence 446888999998 999999999876544
No 204
>PRK06059 lipid-transfer protein; Provisional
Probab=64.73 E-value=32 Score=36.56 Aligned_cols=40 Identities=23% Similarity=0.217 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
..|++++++++|++|+|||.+=+. |. ....-...+.||+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~f-----~~~~l~~~e~lGl~ 316 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDLS-----TALELDWYEHLGLC 316 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeecccC-----hHHHHHHHHHcCCC
Confidence 468999999999999999988544 31 11222334677765
No 205
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=64.01 E-value=13 Score=39.10 Aligned_cols=77 Identities=14% Similarity=0.073 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC-CCce----EEEecCccchHHHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR-HNIN----SFNLGGMGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~-~~~~----~~dl~g~gCs~gl~AL~lA~~lL 266 (508)
-..++++++|+++|++++|||.+... +++..-.+.-+.-+..-++-+ +.++ .-.++...+++|+..+-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 34678999999999999999988755 443333344444455555542 1111 11233356777777777777777
Q ss_pred HcC
Q 038123 267 NAY 269 (508)
Q Consensus 267 ~~g 269 (508)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 765
No 206
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=63.96 E-value=30 Score=36.73 Aligned_cols=75 Identities=17% Similarity=0.056 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCCCceE--EEecCccchHHHHHHHHHHHHHHcC
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRHNINS--FNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~~~~~--~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
.++++++|+++|++|+|||.+... +++..-.+.-...|.+-+|-+..+-+ -.+....+++|+..+..+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 579999999999999999997644 43322234334556666653211111 1233345555665555555555544
No 207
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=62.80 E-value=9.7 Score=36.59 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP 226 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P 226 (508)
-.+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 4566777999999999999999999999998876555
No 208
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=62.55 E-value=15 Score=39.25 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=41.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecC--------ccchHHHHHHHHHHHHH
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAKDLL 266 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~~lL 266 (508)
..+++++++++|++|+|||.+=++ ...+...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~----d~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEIN----EAFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeC----cHHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 469999999999999999988653 112333344566777642 2334433 24555555556666654
Q ss_pred H
Q 038123 267 N 267 (508)
Q Consensus 267 ~ 267 (508)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 209
>PRK09604 UGMP family protein; Validated
Probab=61.28 E-value=30 Score=36.05 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNT 224 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~ 224 (508)
-.+.....++++|+++|++++|||.+.+++.|...
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~ 85 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLV 85 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcH
Confidence 45667888999999999999999999999887653
No 210
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=60.75 E-value=28 Score=35.75 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP 226 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P 226 (508)
-.+.....++++|+++|++++|||.+.++..|...+.
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tg 84 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGS 84 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhh
Confidence 3455677899999999999999999999998875433
No 211
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=59.70 E-value=19 Score=38.13 Aligned_cols=69 Identities=16% Similarity=0.129 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCCC----------------ceEEEecC-------
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRHN----------------INSFNLGG------- 249 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~~----------------~~~~dl~g------- 249 (508)
...|++++++++|++|+|||++-+. +. +...-+..+.||+.+. -..+|.+|
T Consensus 262 ~~~a~~~a~~~agl~~~did~~e~~d~f-----~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG~la~Gh 336 (389)
T PRK07516 262 PRRAWQRALAQAGVTLDDLSFVETHDCF-----TIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGGLKAKGH 336 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCC-----CHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCCcccCCC
Confidence 3579999999999999999988654 32 2333445566666431 12455543
Q ss_pred -ccchHHHHHHHHHHHHHH
Q 038123 250 -MGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 250 -~gCs~gl~AL~lA~~lL~ 267 (508)
.||+|....+.++.+|..
T Consensus 337 p~gasG~~~~~e~~~QL~g 355 (389)
T PRK07516 337 PIGATGVSMHVLAAMQLTG 355 (389)
T ss_pred CccHHHHHHHHHHHHHhcC
Confidence 245566666677777664
No 212
>PLN03168 chalcone synthase; Provisional
Probab=59.37 E-value=20 Score=38.27 Aligned_cols=78 Identities=18% Similarity=0.091 Sum_probs=51.0
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCCC----HHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILATS----KKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~~----~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|+++ +||||++..... +..--.++++||++..-. + ---.|+++++-.+.|..+..
T Consensus 108 Aa~~AL~~ag~~~------~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r---~~d~~~gC~g~~~aL~~A~~ 175 (389)
T PLN03168 108 AAQKAIKEWGGRK------SDITHIVFATTSGVNMPGADHALAKLLGLKPTVK---R---VMMYQTGCFGGASVLRVAKD 175 (389)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce---e---eeeeCCccHHHHHHHHHHHH
Confidence 4567889999998 999999876433 333446889999975421 1 11356677777888876543
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+-.++.+|++++
T Consensus 176 ~i~~~~~~~VLVV~ 189 (389)
T PLN03168 176 LAENNKGARVLAVA 189 (389)
T ss_pred HHHhCCCCEEEEEE
Confidence 21224567777665
No 213
>PLN03173 chalcone synthase; Provisional
Probab=59.08 E-value=22 Score=37.97 Aligned_cols=78 Identities=13% Similarity=0.032 Sum_probs=50.7
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCC----CHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILAT----SKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~----~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|+++ +|||+++.... .+..--.++++||++..-. + .--.|+++++-.+.|..+..
T Consensus 109 Aa~~AL~~ag~~~------~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~---~---~~~~~~gC~g~~~aL~~A~~ 176 (391)
T PLN03173 109 AAAKAIKEWGQPK------SKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVK---R---FMMYQQGCFAGGTVLRLAKD 176 (391)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEEccCCCcccHHHHHHHHHhCCCccce---e---eehhcCccHHHHHHHHHHHH
Confidence 4557888999998 99999876542 2344446889999975411 0 11356777777888876544
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+-.++.+|++++
T Consensus 177 ~~~~~~~~~vLVV~ 190 (391)
T PLN03173 177 LAENNKGARVLVVC 190 (391)
T ss_pred HHHhCCCCeEEEEE
Confidence 21224677787764
No 214
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=58.62 E-value=15 Score=39.15 Aligned_cols=67 Identities=25% Similarity=0.323 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHH--HHHHcCCCCCceEEEecC--------ccchHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAM--VINHYKLRHNINSFNLGG--------MGCSAGIIAIDLAK 263 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~--v~~~lgl~~~~~~~dl~g--------~gCs~gl~AL~lA~ 263 (508)
...|++++|+++|++|+|||.+=++ .+-.... -.+.+|+. ...+|++| .|++|....+.++.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~------dafa~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~ 363 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVN------EAFAAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIH 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehh------hHHHHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHH
Confidence 4679999999999999999988643 1111111 13344543 12344443 35666667777777
Q ss_pred HHHHc
Q 038123 264 DLLNA 268 (508)
Q Consensus 264 ~lL~~ 268 (508)
+|-+.
T Consensus 364 qL~~~ 368 (392)
T PRK06633 364 GLRRA 368 (392)
T ss_pred HHHhc
Confidence 77654
No 215
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=58.07 E-value=30 Score=36.65 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
...|++++++++|++|+|||.+-.. +.+ ...-+..+.+|+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 3578999999999999999988543 322 2344566777763
No 216
>PLN03170 chalcone synthase; Provisional
Probab=57.84 E-value=30 Score=37.01 Aligned_cols=78 Identities=14% Similarity=0.043 Sum_probs=49.8
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCC----CHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILAT----SKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~----~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|+++ +||||++.-.. .+..--.++++||+++.-. +.. -.|+++++-.+.|..+..
T Consensus 113 Aa~~AL~~ag~~~------~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r~~---d~~~gC~G~~~aL~~A~~ 180 (401)
T PLN03170 113 AAQKAIKEWGQPK------SKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVN---RLM---MYQQGCFAGGTVLRVAKD 180 (401)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEEccCCCCCChHHHHHHHHhCcCcccH---HHH---hhcChhHHHHHHHHHHHH
Confidence 4567889999998 99999865332 3344456899999986521 111 345677777777765533
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+-.++.+|++++
T Consensus 181 l~~~~~~~~vLVV~ 194 (401)
T PLN03170 181 LAENNRGARVLVVC 194 (401)
T ss_pred HHHcCCCCeEEEEE
Confidence 21224567787764
No 217
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=57.82 E-value=15 Score=37.10 Aligned_cols=58 Identities=22% Similarity=0.192 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-chHHHHHHHcCCCCCceEEEec
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP-SLSAMVINHYKLRHNINSFNLG 248 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P-s~a~~v~~~lgl~~~~~~~dl~ 248 (508)
.+.....++++|++++++++|||.+.++..|+..++ -.+...+.-|.+.-+++.+.++
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~ 88 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVS 88 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeec
Confidence 344568999999999999999999999998865543 1122222222222235566666
No 218
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.70 E-value=19 Score=38.30 Aligned_cols=76 Identities=12% Similarity=0.078 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC-CCceEE----EecCccchHHHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR-HNINSF----NLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~-~~~~~~----dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
...|++++|+++|++|+|||.+-.. +++..-.+.-..-+..-+|.. .+++.. .+....+++|+..+-.+.-.|+
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~ 357 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999998644 443333343344556666632 122211 2232234455545444444555
Q ss_pred cC
Q 038123 268 AY 269 (508)
Q Consensus 268 ~g 269 (508)
.+
T Consensus 358 ~~ 359 (411)
T PRK07314 358 DQ 359 (411)
T ss_pred CC
Confidence 43
No 219
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.63 E-value=34 Score=36.61 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKL 238 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl 238 (508)
+.++++++|+++|+ |+|||.|... |++..-...-+..|.+.++.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 57899999999999 8999998744 44333333345556666664
No 220
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=56.57 E-value=20 Score=37.99 Aligned_cols=78 Identities=15% Similarity=0.053 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC-CCceEE----EecCccchHHHHHHHHHHHH
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR-HNINSF----NLGGMGCSAGIIAIDLAKDL 265 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~-~~~~~~----dl~g~gCs~gl~AL~lA~~l 265 (508)
.-..++++++|+++|++|+|||.+... +++..-.+.-+..+.+-++-. .+++.. .+.....++++..+..+...
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~ 353 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS 353 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence 345779999999999999999988744 544333343344444445431 112211 23334455555555555555
Q ss_pred HHcC
Q 038123 266 LNAY 269 (508)
Q Consensus 266 L~~g 269 (508)
|+.+
T Consensus 354 l~~~ 357 (407)
T cd00828 354 LEHG 357 (407)
T ss_pred HhcC
Confidence 5543
No 221
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=56.38 E-value=20 Score=35.38 Aligned_cols=80 Identities=15% Similarity=0.173 Sum_probs=47.3
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcC----CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILA----TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq----~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.+.|++.|+.+ +||+|++.-. ..+.+--.+.+.|||+++-- |.-+.-.|--++.+-+- .+..+.
T Consensus 107 Aa~~AL~~~g~~~------~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~-~A~~~~ 176 (226)
T PF00195_consen 107 AARKALAEAGLDP------SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLR-RAKDIA 176 (226)
T ss_dssp HHHHHHHHHTS-G------GGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHH-HHHHHH
T ss_pred HHHHHHHHcCCCC------cccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHH-HHHHHH
Confidence 3456788889988 9999999733 33444558899999987533 45555555555554442 232222
Q ss_pred hCCCCCCCEEEEEeec
Q 038123 464 NAGVKRGDRIWQTAFG 479 (508)
Q Consensus 464 ~gri~~Gd~vlliafG 479 (508)
+. .||.+|++++.=
T Consensus 177 ~~--~p~a~VLvv~vE 190 (226)
T PF00195_consen 177 RA--NPGARVLVVCVE 190 (226)
T ss_dssp HH--STT-EEEEEEEE
T ss_pred hC--CccceEEEEEEE
Confidence 22 489999998764
No 222
>PLN03172 chalcone synthase family protein; Provisional
Probab=55.41 E-value=24 Score=37.70 Aligned_cols=79 Identities=10% Similarity=-0.011 Sum_probs=50.2
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcC----CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILA----TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq----~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|+++|+++ +|||+++... ..+..--.+++.||++..-. . ---.|+++++-.+.|..+..
T Consensus 109 Aa~~aL~~ag~~~------~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~----~--~~~~~~gC~g~~~aL~~A~~ 176 (393)
T PLN03172 109 AAAKAIKEWGQPK------SKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVK----R--FMMYQQGCFAGGTVLRLAKD 176 (393)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEEccCCCcCchHHHHHHHHhCCCCCce----E--EeeeCCchHHHHHHHHHHHH
Confidence 4557888999998 9999987533 23344456899999975411 0 01346777777777776543
Q ss_pred hCCCCCCCEEEEEee
Q 038123 464 NAGVKRGDRIWQTAF 478 (508)
Q Consensus 464 ~gri~~Gd~vlliaf 478 (508)
-=+-.++.+|++++.
T Consensus 177 ~~~~~~~~~vLVV~~ 191 (393)
T PLN03172 177 LAENNAGSRVLVVCS 191 (393)
T ss_pred HHHcCCCCeEEEEEE
Confidence 212235677776653
No 223
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=55.40 E-value=40 Score=35.32 Aligned_cols=89 Identities=22% Similarity=0.166 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCch--HHHHHHHcCCCCCceEEEecCccchHHHHHHHHHH
Q 038123 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSL--SAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAK 263 (508)
Q Consensus 186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~--a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~ 263 (508)
+|...+ -....++++|+++|++.+|||+|-+...|+- .+++ ..+.+.-|.+.-+.+-+-++ -|-|=+.+-.+..
T Consensus 47 sr~H~e-~i~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l~~ 122 (342)
T COG0533 47 SRHHVE-NIPPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARLET 122 (342)
T ss_pred HHHHHH-HHHHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHhcc
Confidence 333333 3567889999999999999999998887763 3332 33344444433356677787 5666555444333
Q ss_pred HHHHcCCCCeEEEEEecc
Q 038123 264 DLLNAYPGSYALVVSTEV 281 (508)
Q Consensus 264 ~lL~~g~~~~aLVVs~E~ 281 (508)
.. ...--+|+||+-.
T Consensus 123 ~~---~~p~v~LlVSGGH 137 (342)
T COG0533 123 GL---AFPPVALLVSGGH 137 (342)
T ss_pred CC---CCCcEEEEEecCc
Confidence 21 1223567777655
No 224
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=54.46 E-value=35 Score=36.54 Aligned_cols=77 Identities=10% Similarity=0.012 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHh-CCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCC--CceEE----EecCccchHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAA-TKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRH--NINSF----NLGGMGCSAGIIAIDLAKD 264 (508)
Q Consensus 193 la~~Aa~~aL~~-agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~--~~~~~----dl~g~gCs~gl~AL~lA~~ 264 (508)
-..+|++++|++ +|++|+|||.+-.. |++..-.+.-..-+.+-+|-.. .++.- .+.....++|+..+..+.-
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l 363 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTIL 363 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHH
Confidence 356799999999 99999999998644 5432222333344666666421 12211 2333344555555555555
Q ss_pred HHHcC
Q 038123 265 LLNAY 269 (508)
Q Consensus 265 lL~~g 269 (508)
.|+.+
T Consensus 364 ~l~~~ 368 (421)
T PTZ00050 364 SLYEQ 368 (421)
T ss_pred HHHcC
Confidence 55554
No 225
>PLN00415 3-ketoacyl-CoA synthase
Probab=54.35 E-value=25 Score=38.41 Aligned_cols=77 Identities=10% Similarity=0.080 Sum_probs=48.0
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCC----HHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHh
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATS----KKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEAN 464 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~----~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~ 464 (508)
+.++|+++|+++ +|||+++....+ +..--.+.+++|++++ + .. -..+.++++.-.+.|..+.+-
T Consensus 142 ~~~aL~~aGi~p------~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~-v----~~-~dL~gmGCsggv~aL~lA~~l 209 (466)
T PLN00415 142 LNSLFKKTGIEP------REVGIFIVNCSLFNPNPSLSSMIVNRYKLKTD-V----KT-YNLSGMGCSAGAISVDLATNL 209 (466)
T ss_pred HHHHHHHcCCCH------HHCCEEEEECcCCCCCchHHHHHHHHhCCCCC-c----eE-EEeccccchHHHHHHHHHHHH
Confidence 346788999999 999999876543 2333468899999833 3 12 234455556556666554332
Q ss_pred CCCCCCCEEEEEe
Q 038123 465 AGVKRGDRIWQTA 477 (508)
Q Consensus 465 gri~~Gd~vllia 477 (508)
=+-.++.++++++
T Consensus 210 l~a~~~~~aLVVs 222 (466)
T PLN00415 210 LKANPNTYAVIVS 222 (466)
T ss_pred HHhCCCCEEEEEE
Confidence 2234677777655
No 226
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=54.13 E-value=26 Score=37.00 Aligned_cols=45 Identities=11% Similarity=0.104 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKL 238 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl 238 (508)
..++++++|+++|++|+|||.+... +.+..-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4678999999999999999988644 54433344445556666664
No 227
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=53.33 E-value=30 Score=35.43 Aligned_cols=79 Identities=9% Similarity=0.093 Sum_probs=53.7
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcC----CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILA----TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq----~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|++| +|||-++.+. +.+.+-..+.+++|+..+-. ....+=+|+|.-.+.++.+..
T Consensus 90 av~~LL~ktgv~p------~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~------~~nLsGMGCsAgliai~lA~~ 157 (290)
T PF08392_consen 90 AVDDLLAKTGVKP------SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK------SYNLSGMGCSAGLIAIDLAKD 157 (290)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee------eecccCCcchhhHHHHHHHHH
Confidence 3568899999999 9999887654 55677888999999986543 233455555555555554433
Q ss_pred hCCCCCCCEEEEEee
Q 038123 464 NAGVKRGDRIWQTAF 478 (508)
Q Consensus 464 ~gri~~Gd~vlliaf 478 (508)
-=+..||..++.++.
T Consensus 158 lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 158 LLQAHPNSYALVVST 172 (290)
T ss_pred HHHhCCCcEEEEEEE
Confidence 234567888777663
No 228
>PRK14878 UGMP family protein; Provisional
Probab=52.91 E-value=24 Score=36.64 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCC
Q 038123 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTT 225 (508)
Q Consensus 186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~ 225 (508)
.|...+.+. .+++++|+++|++++|||.+.++..|...+
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~ 79 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGP 79 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCccc
Confidence 344454444 899999999999999999999998876443
No 229
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=52.72 E-value=47 Score=34.30 Aligned_cols=56 Identities=16% Similarity=0.127 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----chHHHHHHHcCCCCCceEEEecC
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP-----SLSAMVINHYKLRHNINSFNLGG 249 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P-----s~a~~v~~~lgl~~~~~~~dl~g 249 (508)
-.+.....++++|+++|++++|||.+.++..|...+. +.|.-++..+ +++.+.++.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~----~~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALAL----NKPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHh----CCCEEeccc
Confidence 4555678899999999999999999999998875433 2233333333 345556664
No 230
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=52.56 E-value=35 Score=35.75 Aligned_cols=46 Identities=11% Similarity=0.076 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCC
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKL 238 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl 238 (508)
-...|++++|+++|++|+|||.+-.. |++..-.+.-..-|.+-||-
T Consensus 207 ~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 207 GAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 35779999999999999999987543 54443345556667777764
No 231
>PRK08256 lipid-transfer protein; Provisional
Probab=51.97 E-value=38 Score=35.92 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRH 240 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~ 240 (508)
...|++++++++|++++|||.+-+. ...+...-+..+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~----d~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELH----DCFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeec----cCCcHHHHHHHHHcCCCC
Confidence 3579999999999999999988643 122333344556677653
No 232
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=51.52 E-value=34 Score=38.19 Aligned_cols=76 Identities=9% Similarity=0.103 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCchHHHHHHHcCCCCCceEE----EecCccchHHHHHHHHHHHHHHc
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVV-NCGVLNTTPSLSAMVINHYKLRHNINSF----NLGGMGCSAGIIAIDLAKDLLNA 268 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~-~~s~~~~~Ps~a~~v~~~lgl~~~~~~~----dl~g~gCs~gl~AL~lA~~lL~~ 268 (508)
...+++++|+++|++|+|||.|-. +|++..-.+.-...|.+-||-.+.++.. .+....+++|+..+..+-..|+.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~ 486 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT 486 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence 457999999999999999998764 3543322333345566666632222221 23333444555455444445555
Q ss_pred C
Q 038123 269 Y 269 (508)
Q Consensus 269 g 269 (508)
+
T Consensus 487 g 487 (540)
T PLN02787 487 G 487 (540)
T ss_pred C
Confidence 4
No 233
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=51.14 E-value=28 Score=37.55 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCchHHHHHHHcC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVV-NCGVLNTTPSLSAMVINHYK 237 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~-~~s~~~~~Ps~a~~v~~~lg 237 (508)
+.+|.+.+|+++|++|+|||.|-. .|++..-...-+.-|..-+|
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 468999999999999999999874 46654444444555555566
No 234
>PLN02192 3-ketoacyl-CoA synthase
Probab=50.95 E-value=36 Score=37.71 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=50.3
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcC----CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILA----TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq----~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|++| +|||+++... ..+..--.+++++|+..+ + . -...+-+++++-.+.|+.+..
T Consensus 183 Aa~~aL~kaGi~p------~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~-i----~-afdLsgmGCSggl~aLdlA~~ 250 (511)
T PLN02192 183 AIDQLLAKTSVKP------KDIGILIVNCSLFNPTPSLSAMVINHYKLRGN-I----L-SYNLGGMGCSAGLISIDLAKH 250 (511)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEECCCCCCCchHHHHHHHHhCCCCC-c----e-EEEcccchhhhHHHHHHHHHH
Confidence 3557899999999 9999998654 334555678999999733 2 1 123454566666666665533
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+..++.++++++
T Consensus 251 lL~a~~~~~aLVVs 264 (511)
T PLN02192 251 LLQVHPNSYALVIS 264 (511)
T ss_pred HHHcCCCCeEEEEE
Confidence 22234667777665
No 235
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=50.44 E-value=1.3e+02 Score=29.61 Aligned_cols=95 Identities=18% Similarity=0.261 Sum_probs=61.3
Q ss_pred HHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHH
Q 038123 154 FKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVI 233 (508)
Q Consensus 154 f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~ 233 (508)
-++.+.++.|+.+.+..-... .. +-..++.-.++++.+....+++++++- ..|+++.+|.. +-.++.+++
T Consensus 124 il~~lv~~~g~s~~~~~vrst-dl-~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAG---ms~la~~Lq 193 (230)
T COG4126 124 ILEELVRSYGLSRHCRSVRST-DL-PVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAG---MSDLADQLQ 193 (230)
T ss_pred HHHHHHHhcCccccccceeeC-CC-CcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCcc---HHHHHHHHH
Confidence 334566667777665521111 00 112333445778888888888887764 47889999974 345689999
Q ss_pred HHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 234 NHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 234 ~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
..+|++ + |.| -..|+.+|..|++.+
T Consensus 194 ~~~gvP--V----IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 194 KAFGVP--V----IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHhCCC--c----ccc-----hHHHHHHHHHHHhhc
Confidence 999975 1 333 456778888888765
No 236
>PLN02932 3-ketoacyl-CoA synthase
Probab=50.33 E-value=34 Score=37.61 Aligned_cols=78 Identities=10% Similarity=0.140 Sum_probs=48.4
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcC----CCHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILA----TSKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq----~~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|++| +|||+++... ..+..--.++++||++.+-. . -..+-++++.-.+.|..+..
T Consensus 155 Aa~~aL~~agi~p------~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~---~---fdL~gmGCSggl~aL~lA~~ 222 (478)
T PLN02932 155 AVDNLFRNTGISP------SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK---S---LNLGGMGCSAGVIAIDAAKS 222 (478)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce---E---EEeccchhhhHHHHHHHHHH
Confidence 4557889999999 9999997754 33445567899999974422 1 22454666777777765533
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+..++.++++++
T Consensus 223 ll~~~~~~~aLVVs 236 (478)
T PLN02932 223 LLQVHRNTYALVVS 236 (478)
T ss_pred HHHcCCCCeEEEEE
Confidence 11122345555433
No 237
>PRK08304 stage V sporulation protein AD; Validated
Probab=50.24 E-value=63 Score=33.82 Aligned_cols=89 Identities=19% Similarity=0.176 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC-----CC--ceEEEec---------CccchHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR-----HN--INSFNLG---------GMGCSAGII 257 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~-----~~--~~~~dl~---------g~gCs~gl~ 257 (508)
|+..+..=|+++|.+|+|-|++|..=- ...--.+...+..+-|+. .| +.-||.. |-|||+-+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDl-g~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDL-GRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcch-HHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 455666778899999999999986521 111112233333333331 01 3455532 336777665
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecc-CCC
Q 038123 258 AIDLAKDLLNAYPGSYALVVSTEV-VSN 284 (508)
Q Consensus 258 AL~lA~~lL~~g~~~~aLVVs~E~-~S~ 284 (508)
.=.+-+.| +.+..+++|+|++-. +|.
T Consensus 289 ~~~~~~~~-~~g~~~rvl~v~tGaLls~ 315 (337)
T PRK08304 289 YGYLLKEL-QKGKLKRVLVVATGALLSP 315 (337)
T ss_pred HHHHHHHH-hcCCceEEEEEEchhhcCc
Confidence 55554443 457789999999976 444
No 238
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=50.07 E-value=31 Score=36.75 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCCCceEE----EecCccchHHHHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRHNINSF----NLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~~~~~~----dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
-..+|++++|+++|++|+|||.|... |++..-.+.-+.-|.+-||-. +++.. .+....+++++..+..+...|+
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHh
Confidence 35688999999999999999987644 544333444455566667643 22221 2233345556655555555565
Q ss_pred cC
Q 038123 268 AY 269 (508)
Q Consensus 268 ~g 269 (508)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 54
No 239
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.17 E-value=40 Score=36.28 Aligned_cols=76 Identities=16% Similarity=0.128 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC-CCceEE----EecCccchHHHHHHHHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR-HNINSF----NLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~-~~~~~~----dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
..++++++|+++|++|+|||.+... +++....+.-..-|.+.+|-+ .+++.- .+.....++|+..+..+.-.|+
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~ 370 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQ 370 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHh
Confidence 5688999999999999999998854 443333333334455555532 122221 2222334455555544444555
Q ss_pred cC
Q 038123 268 AY 269 (508)
Q Consensus 268 ~g 269 (508)
.+
T Consensus 371 ~~ 372 (425)
T PRK06501 371 TG 372 (425)
T ss_pred cC
Confidence 54
No 240
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=48.89 E-value=38 Score=35.85 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
...|++++++++|++|+|||.+-+. |. +...-+..+.||+.
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d~f-----t~~~l~~le~lGl~ 300 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHDAF-----TIAEIMGYEDLGFT 300 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCcC-----hHHHHHHHHHcCCC
Confidence 4579999999999999999997543 32 23444556677775
No 241
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=48.66 E-value=38 Score=35.97 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCCCCceEE----EecCccchHHHHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLRHNINSF----NLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~~~~~~~----dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
...+|++++|+++|++|+|||.+-.. |++..-.+.-..-|.+-+|- +++.. .+.....++|+..+..+...|+
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~ 332 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLALR 332 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHHh
Confidence 46789999999999999999998744 54332233334445555552 22221 2222334455555555555555
Q ss_pred cC
Q 038123 268 AY 269 (508)
Q Consensus 268 ~g 269 (508)
.+
T Consensus 333 ~~ 334 (381)
T PRK05952 333 HQ 334 (381)
T ss_pred cC
Confidence 44
No 242
>PLN02377 3-ketoacyl-CoA synthase
Probab=48.59 E-value=39 Score=37.39 Aligned_cols=78 Identities=12% Similarity=0.179 Sum_probs=46.0
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCC----CHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILAT----SKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~----~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|+++ +|||+++.... .+..--.++++||+.++-. .+. .+-++++.-.+.|+.+.+
T Consensus 179 A~~~aL~kaGi~p------~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~-----afd-L~gmGCsggl~aL~lA~~ 246 (502)
T PLN02377 179 ALDNLFANTNVNP------KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR-----SFN-LGGMGCSAGVIAVDLAKD 246 (502)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCe-----EEe-cccchhhHHHHHHHHHHH
Confidence 3557889999999 99999988332 3455567899999975422 122 232444555555554422
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+..++.++++++
T Consensus 247 ll~~~~~~~aLVVs 260 (502)
T PLN02377 247 MLQVHRNTYAVVVS 260 (502)
T ss_pred HHHcCCCCEEEEEE
Confidence 11123455555444
No 243
>PRK06158 thiolase; Provisional
Probab=47.83 E-value=52 Score=34.89 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
...|++++++++|++|+|||.+=+. |. +...-+..+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~F-----s~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDAF-----TINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCCc-----hHHHHHHHHHcCCC
Confidence 4679999999999999999987543 32 22333444556654
No 244
>PRK12404 stage V sporulation protein AD; Provisional
Probab=47.67 E-value=75 Score=33.20 Aligned_cols=89 Identities=17% Similarity=0.180 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCC------C--ceEEEe--------cCccchHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRH------N--INSFNL--------GGMGCSAGII 257 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~------~--~~~~dl--------~g~gCs~gl~ 257 (508)
|++.+..=|+++|.+|+|-|+||..=- ...--.+...+..+-|+.- | +.-||- +|-|||+-+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGDL-g~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGDL-GHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcch-HHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 456666778899999999999986521 1111122333333333320 1 233432 2346676665
Q ss_pred HHHHHHHHHHcCCCCeEEEEEecc-CCC
Q 038123 258 AIDLAKDLLNAYPGSYALVVSTEV-VSN 284 (508)
Q Consensus 258 AL~lA~~lL~~g~~~~aLVVs~E~-~S~ 284 (508)
.=.+-+. |+.+..+++|+|++-. +|.
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGALlS~ 313 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGALLSP 313 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhhcCc
Confidence 5444444 3457789999999976 454
No 245
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=47.58 E-value=54 Score=34.82 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCC
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKL 238 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl 238 (508)
....+++++|+++|++|+|||.+... +++..-...-...+.+-+|.
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 35679999999999999999998755 44322222223445555553
No 246
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=47.28 E-value=61 Score=28.71 Aligned_cols=60 Identities=12% Similarity=0.146 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCchHHHHHHHcCCCCCceEEEecCcc
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL--NTTPSLSAMVINHYKLRHNINSFNLGGMG 251 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~--~~~Ps~a~~v~~~lgl~~~~~~~dl~g~g 251 (508)
+..+-..+-.++.+++.+++++||--+++..+++ ...|. ..+.++|.-.+++-++...|.
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~~~~Vplmc~qE~~ 78 (117)
T cd02185 17 EILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGGWKYVPLMCAQEMD 78 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCCCCCcceeecCcCC
Confidence 3333334455667788999999999999987764 44664 455566433477777666533
No 247
>PLN03171 chalcone synthase-like protein; Provisional
Probab=46.83 E-value=50 Score=35.29 Aligned_cols=78 Identities=14% Similarity=0.044 Sum_probs=47.7
Q ss_pred HHHHHHHhcCCCCCcccccccccEEEEcCC----CHHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHH
Q 038123 388 FFTNLLLKKKTKPYIPDYKQAFEHICILAT----SKKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEA 463 (508)
Q Consensus 388 ~~~~~l~~~gl~~y~pd~~~did~f~~Hq~----~~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~ 463 (508)
.+.++|++.|+++ +|||+++.... .+..--.+++.||++..-. + .. +-++++++-.+.|..+..
T Consensus 115 Aa~~aL~~ag~~~------~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~---~--~~-~~~~gC~g~~~aL~~A~~ 182 (399)
T PLN03171 115 AAKKAIAEWGRPA------ADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVR---R--TM-LHLNGCFAGAAALRLAKD 182 (399)
T ss_pred HHHHHHHHcCCCH------HHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccc---e--ee-ccCCccHHHHHHHHHHHH
Confidence 4567889999998 99999987222 2223346889999975421 1 11 233388888888876543
Q ss_pred hCCCCCCCEEEEEe
Q 038123 464 NAGVKRGDRIWQTA 477 (508)
Q Consensus 464 ~gri~~Gd~vllia 477 (508)
-=+-.+..+|++++
T Consensus 183 li~~~~~~~vLVv~ 196 (399)
T PLN03171 183 LAENNRGARVLVVA 196 (399)
T ss_pred HHHhCCCCeEEEEE
Confidence 11112345666544
No 248
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=46.14 E-value=74 Score=33.93 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
...|++++++++|++|+|||++-+. ...+...-+..+.||+.
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~----D~fa~~~l~~le~lGl~ 319 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVH----DCFTPSEYLAIDHIGLT 319 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeee----ccchHHHHHHHHHcCCC
Confidence 4579999999999999999988643 12233445566777775
No 249
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=45.07 E-value=63 Score=28.64 Aligned_cols=59 Identities=8% Similarity=0.166 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCchHHHHHHHc-CCCCCceEEEecCcc
Q 038123 189 EAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL--NTTPSLSAMVINHY-KLRHNINSFNLGGMG 251 (508)
Q Consensus 189 ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~--~~~Ps~a~~v~~~l-gl~~~~~~~dl~g~g 251 (508)
+..+-..+-.++.+++.+++++||--+++..+++ ...|. ..+.++ |+. +++-++...|.
T Consensus 17 ~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~-~Vplmc~qEm~ 78 (117)
T TIGR01796 17 EIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWT-DVPVMCAQEIP 78 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCC-CcceeccCcCC
Confidence 3333344455667788999999999999987764 44664 445566 887 78877776543
No 250
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=45.01 E-value=83 Score=33.38 Aligned_cols=42 Identities=17% Similarity=0.069 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhCCCC--CCCccEEEEe-ccCCCCCCchHHHHHHHcCCC
Q 038123 193 VLFGAIDDLLAATKIR--PKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 193 la~~Aa~~aL~~agi~--p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
....|++++++++|++ ++|||++=+. |. +...-+..+.||+.
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d~F-----~~~~~~~~e~lGl~ 300 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYVPF-----SWFEPMWLENLGFA 300 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEeccCC-----hHHHHHHHHHcCCC
Confidence 3457999999999997 6999987433 32 22333445556654
No 251
>PRK07937 lipid-transfer protein; Provisional
Probab=44.20 E-value=61 Score=34.05 Aligned_cols=77 Identities=12% Similarity=0.006 Sum_probs=44.5
Q ss_pred HHHHHHHHh-CCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCc-------cchHHHHHHHHHHHHHH
Q 038123 196 GAIDDLLAA-TKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGM-------GCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 196 ~Aa~~aL~~-agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~-------gCs~gl~AL~lA~~lL~ 267 (508)
.++++++++ +|++|+|||++=+. ...+...-+..+.||+..+ ..+|.+|- ||+|...-++++.+|..
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~----D~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g 324 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELH----APFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIWD 324 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEe----CCChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHhc
Confidence 344455555 59999999988543 1234444566788888532 35666652 44454555566666543
Q ss_pred cCCCCeEEEEE
Q 038123 268 AYPGSYALVVS 278 (508)
Q Consensus 268 ~g~~~~aLVVs 278 (508)
. ..+++|+.+
T Consensus 325 ~-~a~~~l~~~ 334 (352)
T PRK07937 325 G-SARRALAHA 334 (352)
T ss_pred c-CCCEEEEec
Confidence 3 245555543
No 252
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=43.00 E-value=50 Score=35.44 Aligned_cols=44 Identities=5% Similarity=-0.081 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYK 237 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lg 237 (508)
...|++++|+++|++|+|||.+-.. |.+..-.+.-+.-|.+-||
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 4678899999999999999988543 5444334444556666666
No 253
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=42.61 E-value=37 Score=35.06 Aligned_cols=37 Identities=16% Similarity=0.172 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC
Q 038123 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLN 223 (508)
Q Consensus 186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~ 223 (508)
.|+.++.+. ..++++|+++|++++|||.|.++..|..
T Consensus 42 ~~~H~~~l~-~~i~~~l~~~~~~~~did~Iavt~gPg~ 78 (322)
T TIGR03722 42 AEHHAEVAP-KLIKEALEEAGVSLEDIDAVAFSQGPGL 78 (322)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCch
Confidence 344444444 4599999999999999999999887753
No 254
>PLN02854 3-ketoacyl-CoA synthase
Probab=42.24 E-value=43 Score=37.20 Aligned_cols=77 Identities=10% Similarity=0.131 Sum_probs=48.0
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCC----HHHHHHHHHHcCCCHHHHHHhhhhhcccCccccchHHHHHHHHHHh
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATS----KKVLDEIQKNLELTEELMEASRKTLERFGNTSSSSVWYELAYLEAN 464 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~----~~vld~v~~~Lgl~~e~~~~s~~tl~r~GNtsSaSi~~~La~~~~~ 464 (508)
+.++|+++|+++ +|||+++....+ +..--.+++++|+..+-. . ...+-++++.-.+.|+.+..-
T Consensus 196 ~~~lL~kaGi~p------~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~-----a-fdLsgmGCSggl~aL~lA~~l 263 (521)
T PLN02854 196 LDSLFSKTGVKP------RDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIK-----S-YNLGGMGCSAGLISIDLANDL 263 (521)
T ss_pred HHHHHHHcCCCH------HHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCce-----E-EecccchhhhHHHHHHHHHHH
Confidence 457899999999 999999984332 344456889999864321 1 234445666666777654331
Q ss_pred CCCCCCCEEEEEe
Q 038123 465 AGVKRGDRIWQTA 477 (508)
Q Consensus 465 gri~~Gd~vllia 477 (508)
=+..++.++++++
T Consensus 264 L~~~~~~~aLVVs 276 (521)
T PLN02854 264 LKANPNSYAVVVS 276 (521)
T ss_pred HHhCCCCeEEEEE
Confidence 1123566666554
No 255
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=41.79 E-value=73 Score=28.29 Aligned_cols=57 Identities=14% Similarity=0.219 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCC--CCCCchHHHHHHHc-CCCCCceEEEec
Q 038123 188 EEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVL--NTTPSLSAMVINHY-KLRHNINSFNLG 248 (508)
Q Consensus 188 ~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~--~~~Ps~a~~v~~~l-gl~~~~~~~dl~ 248 (508)
++..+=..+-.++.+++.+++++||--+++..+++ ...|..+. .++ |+. +++-+...
T Consensus 16 e~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a~---R~~~g~~-~Vpl~c~~ 75 (118)
T PF07736_consen 16 EEILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAAA---RELPGWD-DVPLMCAQ 75 (118)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHHH---HHTTTGT-TSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHHH---HccCCCC-ccceeccC
Confidence 34444445556677888999999999999988765 45676543 344 665 66655554
No 256
>PRK00768 nadE NAD synthetase; Reviewed
Probab=41.74 E-value=3.9e+02 Score=27.10 Aligned_cols=150 Identities=15% Similarity=0.153 Sum_probs=73.9
Q ss_pred HHHHHHHHhhcCCCChh-----hHHHHHHHHHHhCCcceeec-CCCccCCCCCCCccchHHHHHHHHHHHHHHHHHhCCC
Q 038123 134 KKEFIEQARESGNFNDA-----SLEFKQRIIKNSGLGDETYL-PRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKI 207 (508)
Q Consensus 134 ~~~~~e~~~~~~~~~~~-----~~~f~~~i~~~sGI~~r~~~-~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi 207 (508)
++++++.++....++.+ -.+|++.-++++|...--.- ..+. ++++ +..|+ .+++..-+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGGI-----DSav------~a~L~----~~A~~~~~~ 67 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGGQ-----DSTL------AGRLA----QLAVEELRA 67 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCH-----HHHH------HHHHH----HHHHHHhcc
Confidence 45667666654444443 24677777788886543321 1121 1111 22222 333333222
Q ss_pred CCCCccE-EEEeccCCC--CCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHHH--------HHHHHHc--------
Q 038123 208 RPKDIRV-LVVNCGVLN--TTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDL--------AKDLLNA-------- 268 (508)
Q Consensus 208 ~p~dId~-LI~~~s~~~--~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~l--------A~~lL~~-------- 268 (508)
+-...+. ++..+.|+. .....+..+++.+|.. +...+||. ....++...+.- |..=+++
T Consensus 68 ~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly 145 (268)
T PRK00768 68 ETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIK-PAVDASVAALEAAGIELSDFVKGNIKARERMIAQY 145 (268)
T ss_pred cccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 1111111 222244432 2345688899999984 36788888 466666554421 1111111
Q ss_pred --CCCCeEEEEEeccCCCCCCCCCCccccccccccccceEEE
Q 038123 269 --YPGSYALVVSTEVVSNTWYGGNEVDMLLPNCFFRMGAAAV 308 (508)
Q Consensus 269 --g~~~~aLVVs~E~~S~~~~~~~dr~~lv~~~lfgDGAaAv 308 (508)
....+.||+++.+.|.-+ -| -.+.+|||++.+
T Consensus 146 ~~An~~~~lvlgT~N~sE~~-~G-------y~TkyGD~~~d~ 179 (268)
T PRK00768 146 AIAGATGGLVVGTDHAAEAV-TG-------FFTKFGDGGADI 179 (268)
T ss_pred HHHccCCCEEEcCCcccHHH-hC-------ceeccCCccccc
Confidence 122346788877766411 11 146678888765
No 257
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=40.79 E-value=58 Score=34.37 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcCCC----CCceEE----EecCccchHHHHHHHHH
Q 038123 192 MVLFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYKLR----HNINSF----NLGGMGCSAGIIAIDLA 262 (508)
Q Consensus 192 ~la~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lgl~----~~~~~~----dl~g~gCs~gl~AL~lA 262 (508)
.-..++++++|+++|++|+|||.+... +++..-.+.-..-+..-++-. ..++.. .++....++++..+-.+
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~ 358 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKV 358 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHH
Confidence 345689999999999999999998755 433222222233344444321 011111 23333455556555555
Q ss_pred HHHHHcC
Q 038123 263 KDLLNAY 269 (508)
Q Consensus 263 ~~lL~~g 269 (508)
...|+.+
T Consensus 359 ~~~l~~~ 365 (421)
T cd00833 359 VLALEHG 365 (421)
T ss_pred HHHHhcC
Confidence 5555554
No 258
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=39.68 E-value=57 Score=34.31 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCch--HHHHHHHcCCCCCceEEEecC
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSL--SAMVINHYKLRHNINSFNLGG 249 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~--a~~v~~~lgl~~~~~~~dl~g 249 (508)
.+.....++++|+++|++++|||.|.+...|.. .+++ ....+.-|.+.-+++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 334567889999999999999999998888773 2322 222333333333456677773
No 259
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=39.66 E-value=57 Score=34.88 Aligned_cols=44 Identities=14% Similarity=0.091 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCchHHHHHHHcC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVV-NCGVLNTTPSLSAMVINHYK 237 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~-~~s~~~~~Ps~a~~v~~~lg 237 (508)
..++++++|+++|++|+|||.+.. .|++..-.+.-+.-|.+-||
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 458999999999999999998874 45544334555566777777
No 260
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=39.62 E-value=79 Score=31.49 Aligned_cols=85 Identities=18% Similarity=0.265 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCc-hHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHHcC
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPS-LSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLNAY 269 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps-~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~~g 269 (508)
......-++.+|++++++++|||.+-+.-.|..-.|= ..+.++.-+.+=-+.+-..++ .|-|-+ .+.+. +.-.
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR~-iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGRE-ITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcce-eccC
Confidence 3455667788899999999999998887777766663 234444444432245555666 565533 33322 2222
Q ss_pred CCCeEEEEEecc
Q 038123 270 PGSYALVVSTEV 281 (508)
Q Consensus 270 ~~~~aLVVs~E~ 281 (508)
.+-.||-||+-+
T Consensus 124 ~nPvvLYvSGGN 135 (336)
T KOG2708|consen 124 QNPVVLYVSGGN 135 (336)
T ss_pred CCCEEEEEeCCc
Confidence 356788888766
No 261
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=39.54 E-value=50 Score=35.25 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ccCCCCCCchHHHHHHHcC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN-CGVLNTTPSLSAMVINHYK 237 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~-~s~~~~~Ps~a~~v~~~lg 237 (508)
..+|++++|+++|++|+|||.+-.. |++..-.+.-...+.+.+|
T Consensus 290 ~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 290 ARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 5789999999999999999998643 5433233344555667776
No 262
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=38.21 E-value=65 Score=34.63 Aligned_cols=45 Identities=13% Similarity=0.046 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eccCCCCCCchHHHHHHHcCC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVV-NCGVLNTTPSLSAMVINHYKL 238 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~-~~s~~~~~Ps~a~~v~~~lgl 238 (508)
..++++++|+++|++|+|||.+-. .|++..-.+.-+..|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 568999999999999999999864 354433345556667777774
No 263
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=38.12 E-value=1.2e+02 Score=32.46 Aligned_cols=41 Identities=17% Similarity=0.089 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEeccCCCCCCchHHHHHHHcCCC
Q 038123 195 FGAIDDLLAATKIR--PKDIRVLVVNCGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 195 ~~Aa~~aL~~agi~--p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
..|++++++++|++ ++|||.+-++ ...+...-+..+.||+.
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~----D~Ft~~~l~~~e~lG~~ 301 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVD----DRYSYKELQHIEALRLS 301 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEe----cCChHHHHHHHHHcCCC
Confidence 36999999999997 6999998654 11222334455566664
No 264
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=37.82 E-value=1.2e+02 Score=32.68 Aligned_cols=25 Identities=12% Similarity=0.028 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN 218 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~ 218 (508)
...|++++|+++|++++|||++=++
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 4578999999999999999998654
No 265
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=37.45 E-value=35 Score=35.21 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCC-------ceEEEe---------cCccchHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHN-------INSFNL---------GGMGCSAGII 257 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~-------~~~~dl---------~g~gCs~gl~ 257 (508)
|+..+..=|+++|.+|+|-|+||..=- ...--.+...+.++-|+.-. +.-||. +|-|||+.+.
T Consensus 205 A~dTI~~h~~D~g~~p~dYDlIvTGDL-g~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~ 283 (329)
T PF07451_consen 205 AADTIEQHFKDTGRSPDDYDLIVTGDL-GKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhcCeEEecch-HHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHH
Confidence 455566678899999999999996521 01111233334444443210 112222 2346776665
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeccC
Q 038123 258 AIDLAKDLLNAYPGSYALVVSTEVV 282 (508)
Q Consensus 258 AL~lA~~lL~~g~~~~aLVVs~E~~ 282 (508)
.=.+-+. |+.+..+++|+|++-.+
T Consensus 284 ~g~ll~~-l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 284 CGYLLPK-LRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHCHHHH-HHTTS-SEEEEEEEEE-
T ss_pred HHHHHHH-HHcCCceEEEEEEchhh
Confidence 5555444 45578999999999763
No 266
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=37.13 E-value=87 Score=33.05 Aligned_cols=49 Identities=18% Similarity=0.153 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-----chHHHHHHHcCCC
Q 038123 191 AMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP-----SLSAMVINHYKLR 239 (508)
Q Consensus 191 ~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P-----s~a~~v~~~lgl~ 239 (508)
.+-.-++.+++|+++|..|+|+|++-|...|+.+.+ +.|-.++.++..+
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 344667889999999999999999998888776544 3455566666543
No 267
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=37.10 E-value=53 Score=36.32 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCC
Q 038123 186 GREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLN 223 (508)
Q Consensus 186 ~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~ 223 (508)
.+...+.+. .+++++|+++|++++|||.|.+...|..
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~ 81 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGL 81 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCc
Confidence 344555555 8999999999999999999998888764
No 268
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=36.56 E-value=63 Score=32.63 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=34.2
Q ss_pred HHHHHHhcCCCCCcccccccccEEEEcCCCHHHHHHHHHHcCCCHHHH
Q 038123 389 FTNLLLKKKTKPYIPDYKQAFEHICILATSKKVLDEIQKNLELTEELM 436 (508)
Q Consensus 389 ~~~~l~~~gl~~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e~~ 436 (508)
+...|.+.|++. .|||.|=++.+-..-.-.+++.|+++.++.
T Consensus 299 I~~vLKksGlkl------~DiDl~EvNEAFApQ~LAv~r~L~ld~sKl 340 (396)
T KOG1391|consen 299 ISGVLKKSGLKL------KDIDLVEVNEAFAPQYLAVERSLDLDISKL 340 (396)
T ss_pred HHHHHHHcCCcc------cccceEEechhhchHHHHHHHhhCCChhhc
Confidence 346788889998 999998887766666677899999999887
No 269
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=36.13 E-value=1.1e+02 Score=32.00 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC-----CC--ceEEEe--------cCccchHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR-----HN--INSFNL--------GGMGCSAGIIA 258 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~-----~~--~~~~dl--------~g~gCs~gl~A 258 (508)
|+..+.+=|+++|.+|++-|++|..=- ...--.+...+..+-|+. .+ ..-||- +|-|||+-+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgdl-g~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGDL-ARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecch-HHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 456667778899999999999986521 111112223333333321 01 233433 23466766655
Q ss_pred HHHHHHHHHcCCCCeEEEEEecc-CCC
Q 038123 259 IDLAKDLLNAYPGSYALVVSTEV-VSN 284 (508)
Q Consensus 259 L~lA~~lL~~g~~~~aLVVs~E~-~S~ 284 (508)
=.+-+.| +.+..+++|+|++-. +|.
T Consensus 283 ~~~~~~~-~~g~~~r~l~v~tgalls~ 308 (327)
T TIGR02845 283 GHILKEM-LRGKLKKVLVVATGALLSP 308 (327)
T ss_pred HHHHHHH-hcCcceEEEEEEchhhcCc
Confidence 4444443 457789999999976 454
No 270
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=35.59 E-value=35 Score=34.50 Aligned_cols=30 Identities=23% Similarity=0.414 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEe-c
Q 038123 190 AAMVLFGAIDDLLAATKIRPKDIRVLVVN-C 219 (508)
Q Consensus 190 a~~la~~Aa~~aL~~agi~p~dId~LI~~-~ 219 (508)
-.||...|++++++++|+.|+||+.+=.. |
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielhdc 300 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELHDC 300 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence 45788899999999999999999988643 5
No 271
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=35.40 E-value=1.8e+02 Score=31.43 Aligned_cols=25 Identities=12% Similarity=0.231 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVN 218 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~ 218 (508)
...|++++|+++|++|+|||.+-..
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~h 325 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAH 325 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEcc
Confidence 5678999999999999999988644
No 272
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=32.77 E-value=91 Score=33.72 Aligned_cols=24 Identities=13% Similarity=0.052 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVN 218 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~ 218 (508)
..|++++++++|++++|||++=++
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 469999999999999999988544
No 273
>PRK08329 threonine synthase; Validated
Probab=32.17 E-value=94 Score=32.48 Aligned_cols=55 Identities=24% Similarity=0.296 Sum_probs=38.0
Q ss_pred cCCCHHHHHHhhhhhcccC---ccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHh
Q 038123 429 LELTEELMEASRKTLERFG---NTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVK 483 (508)
Q Consensus 429 Lgl~~e~~~~s~~tl~r~G---NtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~ 483 (508)
..++++++......+.+.| -.+|+..+..+..+.++|.+++|++|+++--|+|+|
T Consensus 288 ~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 288 ISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred EEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 4456665543333333333 234666677777888899999999999999999976
No 274
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=30.80 E-value=1.1e+02 Score=31.78 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCC-------ceEEEecCccchHHHHHHHHHHHHHH
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHN-------INSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~-------~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
+-|+.++++.+|++.+|||+.=.|- ..-|.+.+-.++||+.++ +.++.-- .||+|.=.-..+-..|=+
T Consensus 323 avAIp~alk~aGL~v~did~FEINE----AFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 323 AVAIPKALKAAGLEVDDIDLFEINE----AFASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKR 397 (435)
T ss_pred hhhhHHHHHHcCCcccccceeehhH----HHHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHh
Confidence 3478889999999999999765442 123455667888888632 1222223 467766555555555544
Q ss_pred cCC
Q 038123 268 AYP 270 (508)
Q Consensus 268 ~g~ 270 (508)
.+.
T Consensus 398 rgk 400 (435)
T KOG1389|consen 398 RGK 400 (435)
T ss_pred hcc
Confidence 443
No 275
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=29.53 E-value=51 Score=32.21 Aligned_cols=39 Identities=28% Similarity=0.304 Sum_probs=30.2
Q ss_pred cCccccchHHHHHHHHHHhCCCCCCCEEEEEeechHHhhhh
Q 038123 446 FGNTSSSSVWYELAYLEANAGVKRGDRIWQTAFGSGVKCNS 486 (508)
Q Consensus 446 ~GNtsSaSi~~~La~~~~~gri~~Gd~vlliafGsG~~~~s 486 (508)
+|-|-|. |...+.+.+.=.+++||+|+=||-|+|+..+.
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAv 89 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAAV 89 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHHH
Confidence 5555444 66677777777899999999999999987543
No 276
>PRK13410 molecular chaperone DnaK; Provisional
Probab=28.27 E-value=1.4e+02 Score=34.18 Aligned_cols=63 Identities=21% Similarity=0.222 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAID 260 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~ 260 (508)
....++++|+++|+++++||.|++.... ..+|.+-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 311 ~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~---~~~~~npdeaVA~GAAi~ 373 (668)
T PRK13410 311 LLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPRE---PNQNVNPDEVVAVGAAIQ 373 (668)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCC---cccCCCCchHHHHhHHHH
Confidence 4556778899999999999988865322 35899999999999854 234445444555444444
No 277
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=27.62 E-value=1.3e+02 Score=31.85 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=44.0
Q ss_pred chHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC--------chHHHHHHHcCCC--CCceEEEec
Q 038123 185 DGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP--------SLSAMVINHYKLR--HNINSFNLG 248 (508)
Q Consensus 185 ~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P--------s~a~~v~~~lgl~--~~~~~~dl~ 248 (508)
+...+-..+-.+|++++++++++++++||+|=..-.+-+..| .-.+.|+++.|++ .|-+.-|+.
T Consensus 64 ~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a 137 (365)
T PRK09585 64 ELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVA 137 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHh
Confidence 344556677889999999999999999998865433222222 2478899999986 233344555
No 278
>PF08745 UPF0278: UPF0278 family; InterPro: IPR022785 This entry contains proteins of the UPF0278 family and proteins containing PIN domains. Members of the UPF0278 family are uncharacterised and about 200 amino acids in length.; PDB: 2LCQ_A.
Probab=27.09 E-value=21 Score=34.56 Aligned_cols=52 Identities=21% Similarity=0.367 Sum_probs=0.0
Q ss_pred EEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCc
Q 038123 119 VDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAV 174 (508)
Q Consensus 119 ~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~ 174 (508)
.+++||.|| --.+|+.......+.-.+-..+|..++..++==..+-..|...
T Consensus 41 l~is~YmPp----SVy~El~~fl~~~~~~~e~~~k~~twvv~KsP~ryev~IPA~i 92 (205)
T PF08745_consen 41 LGISCYMPP----SVYKELKNFLERNGCDEEVISKLDTWVVKKSPDRYEVKIPAEI 92 (205)
T ss_dssp --------------------------------------------------------
T ss_pred ccccccccc----ccccccccccccccccccccccccccccccccccccccccccc
Confidence 468899998 3445566655544432222345556666666333333344443
No 279
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=26.14 E-value=95 Score=27.64 Aligned_cols=49 Identities=27% Similarity=0.401 Sum_probs=30.7
Q ss_pred chHHHHHHHHHHhCCCCCCCEEEEEe-echHHhhhheeEEEeccC-CCCC-----CCCCCcCC
Q 038123 452 SSVWYELAYLEANAGVKRGDRIWQTA-FGSGVKCNSVVWKALRNV-EKPE-----RSPWLESS 507 (508)
Q Consensus 452 aSi~~~La~~~~~gri~~Gd~vllia-fGsG~~~~sav~r~~~~~-~~~~-----~~~w~~~~ 507 (508)
|.++++=+++.+- .++.||+|.+-+ || .+|.++-..- .++. .+||+.++
T Consensus 31 a~~~inp~D~~~L-gv~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~v 86 (128)
T COG1153 31 AVCEINPEDMKQL-GVSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVV 86 (128)
T ss_pred eEEEECHHHHHHh-CCCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCccccee
Confidence 3344444554443 468999999887 77 5666665442 1112 59999875
No 280
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=25.95 E-value=2.1e+02 Score=26.91 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhC--CCCCCCccEEEE-eccCCCCCC--chHHHHHHHcCCCCCceEEEecCccchHHHHHHHHHHHHHH
Q 038123 193 VLFGAIDDLLAAT--KIRPKDIRVLVV-NCGVLNTTP--SLSAMVINHYKLRHNINSFNLGGMGCSAGIIAIDLAKDLLN 267 (508)
Q Consensus 193 la~~Aa~~aL~~a--gi~p~dId~LI~-~~s~~~~~P--s~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~lA~~lL~ 267 (508)
-+..++++.+++- .-.-+.|+++++ +.+.+...| +-...+...+.- . .. . .|-.+.-.||.+|.++++
T Consensus 28 ~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~~---~--~~-~-~G~t~l~~aL~~A~~~l~ 100 (183)
T cd01453 28 VVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALKT---A--RE-C-SGEPSLQNGLEMALESLK 100 (183)
T ss_pred HHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhhc---c--cC-C-CCchhHHHHHHHHHHHHh
Confidence 3445555555432 112246999999 555544444 222344444431 1 11 1 255788899999999997
Q ss_pred cCC---CCeEEEEEecc
Q 038123 268 AYP---GSYALVVSTEV 281 (508)
Q Consensus 268 ~g~---~~~aLVVs~E~ 281 (508)
..+ .++++|+.++.
T Consensus 101 ~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 101 HMPSHGSREVLIIFSSL 117 (183)
T ss_pred cCCccCceEEEEEEcCC
Confidence 532 35678887663
No 281
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=25.73 E-value=4.7e+02 Score=27.16 Aligned_cols=105 Identities=12% Similarity=0.161 Sum_probs=59.7
Q ss_pred CCceEEEEEeEEeCCCCceecHHHHHHHHhhcCCCChhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHH
Q 038123 113 PCWIYLVDFACYRPPNELKISKKEFIEQARESGNFNDASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAM 192 (508)
Q Consensus 113 ~~~v~I~~~~~y~P~~~~~v~~~~~~e~~~~~~~~~~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 192 (508)
...-||++.++| |. +-+..+..+..... .+|-+ =|.+.|.+..||..|.+-.+-.. + ...
T Consensus 210 sgsdYiISrATF-P~--YFiKeq~vv~~s~t--~iDl~--iFr~~iA~aLgIThRfVG~EP~c-----~--------vT~ 269 (352)
T COG3053 210 SGSDYIISRATF-PA--YFIKEQSVVNDSQT--EIDLK--IFRKYIAPALGITHRFVGTEPFC-----R--------VTA 269 (352)
T ss_pred cCCCeEEEeccc-ch--hhhhhHHHHHHHHH--HHHHH--HHHHHHHHHhCcceeeecCCCCc-----H--------HHH
Confidence 345688888887 66 34444443333321 01111 25566888999999876433211 1 112
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcC
Q 038123 193 VLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYK 237 (508)
Q Consensus 193 la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lg 237 (508)
.=-+..++-|++.+...--|++++.--...+..|--|+.|...+.
T Consensus 270 ~YNq~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l~ 314 (352)
T COG3053 270 IYNQQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLLA 314 (352)
T ss_pred HHHHHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHHH
Confidence 223455677888888888899888764433445544555554443
No 282
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.77 E-value=90 Score=33.07 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEE-EeccC
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLV-VNCGV 221 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI-~~~s~ 221 (508)
+..|.+++|+++|+.|+|||.|= ++||+
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST 331 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATST 331 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccC
Confidence 67899999999999999999885 55654
No 283
>CHL00094 dnaK heat shock protein 70
Probab=23.28 E-value=1.9e+02 Score=32.77 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCC
Q 038123 196 GAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLR 239 (508)
Q Consensus 196 ~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~ 239 (508)
..++++|+++|+++++||.|++.... ...|.+-.++.+.+|..
T Consensus 313 ~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 313 IPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 45678999999999999998865322 36899999999999854
No 284
>TIGR02435 CobG precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively.
Probab=22.74 E-value=3.4e+02 Score=28.79 Aligned_cols=94 Identities=18% Similarity=0.151 Sum_probs=49.1
Q ss_pred hhhHHHHHHHHHHhCCcceeecCCCccCCCCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEE--EEecc--CCC-
Q 038123 149 DASLEFKQRIIKNSGLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVL--VVNCG--VLN- 223 (508)
Q Consensus 149 ~~~~~f~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~L--I~~~s--~~~- 223 (508)
.+.++.+..+.++.|.++-+..+.-...++.-+ + + -.+++.+.|++.|+....-+.. +++|. +.+
T Consensus 270 ~~~l~~la~ia~~~g~~~irlT~~Q~l~i~~i~------~--~--~~~~~~~~l~~~gl~~~~~~~~~~v~aC~G~~~C~ 339 (390)
T TIGR02435 270 AAQLRGLAQLAQALGDGDLRLTPWRALLVLGLP------P--E--RADAAQRALAALGLVTSASDPRARIIACTGAPGCA 339 (390)
T ss_pred HHHHHHHHHHHHHhCCCeEEEcCCcceEEcCCC------H--H--HHHHHHHHHHHCCCCcCCCCCeeeEEECCCccccc
Confidence 333333445777788777666543222111111 0 1 1355566677788765433322 45553 232
Q ss_pred ----CCCchHHHHHHHcCCCCCceEEEecCccchHH
Q 038123 224 ----TTPSLSAMVINHYKLRHNINSFNLGGMGCSAG 255 (508)
Q Consensus 224 ----~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~g 255 (508)
.+..++..|.++++-... ..+.++ ||..+
T Consensus 340 ~~~~~t~~~a~~l~~~~~~~~~-~~i~vS--GC~n~ 372 (390)
T TIGR02435 340 SALADTRADAEALAAYCEPTAP-ITVHLS--GCAKG 372 (390)
T ss_pred cchhhHHHHHHHHHHHhcccCC-cEEEEe--CCccc
Confidence 344567788888765422 455666 78754
No 285
>PLN03184 chloroplast Hsp70; Provisional
Probab=22.65 E-value=2e+02 Score=32.97 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHH
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAID 260 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~ 260 (508)
...++++|+++++++++||.|++.... ..+|.+-.+|.+.+|.. ....++..-|.+.-.|+.
T Consensus 349 ~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~---~~~~~npdeaVA~GAAi~ 410 (673)
T PLN03184 349 KTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKD---PNVTVNPDEVVALGAAVQ 410 (673)
T ss_pred HHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCC---cccccCcchHHHHHHHHH
Confidence 445778999999999999998865321 25899999999999864 234455445555444444
No 286
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=21.89 E-value=1.9e+02 Score=30.88 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 038123 195 FGAIDDLLAATKIRPKDIRVLVVN 218 (508)
Q Consensus 195 ~~Aa~~aL~~agi~p~dId~LI~~ 218 (508)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 579999999999999999987643
No 287
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=21.67 E-value=2.3e+02 Score=32.20 Aligned_cols=63 Identities=14% Similarity=0.093 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAID 260 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~ 260 (508)
....++++|+++|+.+++||.|++.... ..+|.+-.+|.+.+|... ..+++..-|.+.-.|+.
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~~---~~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 311 TLLACRRALRDAGVEADEVKEVVMVGGS-TRVPLVREAVGEFFGRTP---LTSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHcCCCcccCCEEEEECCc-ccChHHHHHHHHHhccCc---CcCCCchHHHHHHHHHH
Confidence 4556788999999999999998865321 357889999999998642 23455444444444443
No 288
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=21.24 E-value=2.5e+02 Score=30.33 Aligned_cols=69 Identities=9% Similarity=-0.018 Sum_probs=48.7
Q ss_pred HHHHHHHhcCCC--CCcccccccccEEEEcCCCHHHHHHHHHHcCCCHH------------------HHHHhhhhhcccC
Q 038123 388 FFTNLLLKKKTK--PYIPDYKQAFEHICILATSKKVLDEIQKNLELTEE------------------LMEASRKTLERFG 447 (508)
Q Consensus 388 ~~~~~l~~~gl~--~y~pd~~~did~f~~Hq~~~~vld~v~~~Lgl~~e------------------~~~~s~~tl~r~G 447 (508)
.+.++++++|++ + +|||.+-+|-.-....-...+.||+.+. .+.+| -=+--+|
T Consensus 298 a~~~a~~~AGl~~~~------~DiD~~Ei~D~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~-GG~la~G 370 (430)
T PRK06365 298 AAKEAYEMAGITDPL------NDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPS-GGLLAAG 370 (430)
T ss_pred HHHHHHHHcCCCCCH------HHCCEEEeecCCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCC-CchhcCC
Confidence 345788999997 7 9999999999876666677889998752 22110 1112489
Q ss_pred ccccchHHHHHHHHHH
Q 038123 448 NTSSSSVWYELAYLEA 463 (508)
Q Consensus 448 NtsSaSi~~~La~~~~ 463 (508)
|...++=.+.+.++..
T Consensus 371 hp~GatG~~~~~e~~~ 386 (430)
T PRK06365 371 HAVGATGIMQAVFMFW 386 (430)
T ss_pred CcccHHHHHHHHHHHH
Confidence 9988877777776655
No 289
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=20.70 E-value=2.9e+02 Score=31.72 Aligned_cols=63 Identities=13% Similarity=0.066 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAID 260 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~ 260 (508)
....++++|+++|+++++||.|++.... ..+|.+-.+|.+.+|..+ ..+++-.-|.+.-.|+.
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGs-sriP~V~~~l~~~fg~~~---~~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGM-TRMPKVVEEVKKFFQKDP---FRGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCc-ccChHHHHHHHHHhCCCc---cccCCCchHHHHhHHHH
Confidence 3456778899999999999988765321 368999999999998642 23455445555544444
No 290
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=20.26 E-value=2.5e+02 Score=31.85 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeccCCCCCCchHHHHHHHcCCCCCceEEEecCccchHHHHHHH
Q 038123 194 LFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTPSLSAMVINHYKLRHNINSFNLGGMGCSAGIIAID 260 (508)
Q Consensus 194 a~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~Ps~a~~v~~~lgl~~~~~~~dl~g~gCs~gl~AL~ 260 (508)
....++++|+++|+++++||.|++.... ..+|.+-.+|.+.+|.. ...+++..-|.+.-.|+.
T Consensus 309 ~~~~i~~~l~~a~~~~~~id~ViLvGGs-sriP~v~~~l~~~fg~~---~~~~~npdeava~GAa~~ 371 (627)
T PRK00290 309 TIEPCKQALKDAGLSVSDIDEVILVGGS-TRMPAVQELVKEFFGKE---PNKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCc-CCChHHHHHHHHHhCCC---CCcCcCChHHHHHhHHHH
Confidence 4556788899999999999988865321 35899999999999854 223444445555555554
No 291
>PF11385 DUF3189: Protein of unknown function (DUF3189); InterPro: IPR021525 This family of proteins with unknown function appears to be restricted to Firmicutes
Probab=20.23 E-value=1.6e+02 Score=27.06 Aligned_cols=72 Identities=14% Similarity=0.227 Sum_probs=47.6
Q ss_pred CCcceeecCCCccCCCCCCCccchHHHHHHHHHHHHHHHHHhCCCCCCCccEEEEeccCCCCCC-chHHHHHHHcCCC
Q 038123 163 GLGDETYLPRAVFCPGYRPNLKDGREEAAMVLFGAIDDLLAATKIRPKDIRVLVVNCGVLNTTP-SLSAMVINHYKLR 239 (508)
Q Consensus 163 GI~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~LI~~~s~~~~~P-s~a~~v~~~lgl~ 239 (508)
..|+=.|...|+.. +.-....++...+++.+|+..+++-.|.+.+ ++++++|++....+ .+...+..++|+.
T Consensus 48 d~G~l~y~G~De~g---n~VY~lG~~~~~~~~~~al~~l~~i~~~~~~--~i~~vdt~~~vn~~m~iGg~lsrrl~l~ 120 (148)
T PF11385_consen 48 DIGRLIYMGTDEYG---NEVYILGRKNNGKIVERALKSLLEILGIENE--EIILVDTSPYVNLLMKIGGFLSRRLGLV 120 (148)
T ss_pred cCceEEEEEEcCCC---CEEEEEecCChHHHHHHHHHHHHHHhCCCCC--cEEEEeccccchHHHHHHHHHHhhcCcc
Confidence 34555565554421 1111223445678899999999999887644 55888888765444 5678899999986
Done!