Query 038126
Match_columns 169
No_of_seqs 23 out of 25
Neff 1.8
Searched_HMMs 29240
Date Mon Mar 25 13:14:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jwg_A HEN1, methyltransferase 96.1 0.0068 2.3E-07 43.4 4.4 93 45-140 32-140 (219)
2 3g5l_A Putative S-adenosylmeth 96.1 0.0028 9.5E-08 46.4 2.4 93 45-140 47-144 (253)
3 2yqz_A Hypothetical protein TT 96.1 0.0027 9.4E-08 46.0 2.3 96 45-145 42-144 (263)
4 3f4k_A Putative methyltransfer 96.1 0.003 1E-07 45.9 2.5 96 45-141 49-150 (257)
5 3cgg_A SAM-dependent methyltra 96.0 0.0057 2E-07 41.7 3.5 92 46-141 50-147 (195)
6 3hm2_A Precorrin-6Y C5,15-meth 96.0 0.0084 2.9E-07 40.9 4.3 109 47-157 30-144 (178)
7 3h2b_A SAM-dependent methyltra 95.8 0.0076 2.6E-07 42.5 3.8 92 46-141 45-141 (203)
8 3lcc_A Putative methyl chlorid 95.7 0.0063 2.2E-07 44.2 3.0 98 45-145 69-175 (235)
9 2p8j_A S-adenosylmethionine-de 95.6 0.0045 1.6E-07 43.5 1.9 96 45-141 26-128 (209)
10 3jwh_A HEN1; methyltransferase 95.5 0.015 5.1E-07 41.7 4.2 94 45-141 32-141 (217)
11 3dh0_A SAM dependent methyltra 95.2 0.019 6.6E-07 40.7 3.9 94 47-141 42-143 (219)
12 3cc8_A Putative methyltransfer 95.0 0.037 1.3E-06 38.7 4.9 92 45-141 35-130 (230)
13 4hg2_A Methyltransferase type 94.6 0.014 4.8E-07 45.6 2.1 91 46-142 43-136 (257)
14 3i9f_A Putative type 11 methyl 94.5 0.032 1.1E-06 38.1 3.5 90 45-141 20-112 (170)
15 3d2l_A SAM-dependent methyltra 94.3 0.034 1.2E-06 39.7 3.4 92 45-140 36-136 (243)
16 1xtp_A LMAJ004091AAA; SGPP, st 94.2 0.014 4.8E-07 42.2 1.2 94 46-141 97-197 (254)
17 1vl5_A Unknown conserved prote 94.2 0.039 1.3E-06 40.5 3.6 92 46-141 41-140 (260)
18 2gs9_A Hypothetical protein TT 94.2 0.045 1.5E-06 38.7 3.8 90 46-141 40-132 (211)
19 4htf_A S-adenosylmethionine-de 94.1 0.042 1.4E-06 41.1 3.7 93 46-141 72-173 (285)
20 2ex4_A Adrenal gland protein A 94.1 0.025 8.5E-07 41.3 2.4 96 45-141 82-185 (241)
21 3dtn_A Putative methyltransfer 94.1 0.016 5.6E-07 41.6 1.3 93 45-141 47-148 (234)
22 2yxd_A Probable cobalt-precorr 94.0 0.032 1.1E-06 37.7 2.6 107 47-159 40-150 (183)
23 3dlc_A Putative S-adenosyl-L-m 93.8 0.052 1.8E-06 37.7 3.5 95 46-141 47-148 (219)
24 2p7i_A Hypothetical protein; p 93.7 0.062 2.1E-06 37.9 3.8 91 46-141 46-141 (250)
25 3l8d_A Methyltransferase; stru 93.7 0.025 8.4E-07 40.6 1.7 93 45-141 56-153 (242)
26 3g5t_A Trans-aconitate 3-methy 93.5 0.03 1E-06 42.5 2.0 94 45-139 39-147 (299)
27 3e23_A Uncharacterized protein 93.5 0.066 2.3E-06 38.0 3.7 92 45-142 46-142 (211)
28 3bkw_A MLL3908 protein, S-aden 93.4 0.079 2.7E-06 37.8 3.9 94 45-141 46-144 (243)
29 3ccf_A Cyclopropane-fatty-acyl 93.3 0.074 2.5E-06 39.8 3.8 91 45-140 60-153 (279)
30 3mgg_A Methyltransferase; NYSG 93.1 0.079 2.7E-06 39.1 3.6 92 45-140 40-141 (276)
31 3hnr_A Probable methyltransfer 93.1 0.063 2.2E-06 38.0 2.9 91 46-141 49-145 (220)
32 3bkx_A SAM-dependent methyltra 93.0 0.1 3.6E-06 38.3 4.2 95 47-141 48-159 (275)
33 3kkz_A Uncharacterized protein 93.0 0.044 1.5E-06 40.6 2.1 96 45-141 49-150 (267)
34 3grz_A L11 mtase, ribosomal pr 93.0 0.061 2.1E-06 38.1 2.7 102 47-152 65-170 (205)
35 2i62_A Nicotinamide N-methyltr 92.9 0.11 3.8E-06 37.5 4.2 51 92-142 139-199 (265)
36 3ege_A Putative methyltransfer 92.9 0.055 1.9E-06 40.3 2.6 93 46-143 38-133 (261)
37 3m70_A Tellurite resistance pr 92.9 0.063 2.2E-06 40.1 2.8 92 47-141 125-223 (286)
38 2pxx_A Uncharacterized protein 92.8 0.028 9.4E-07 39.2 0.7 96 45-142 45-160 (215)
39 2xvm_A Tellurite resistance pr 92.7 0.09 3.1E-06 36.2 3.2 91 45-141 35-136 (199)
40 3ujc_A Phosphoethanolamine N-m 92.6 0.023 7.7E-07 41.1 0.1 94 45-141 58-159 (266)
41 3sm3_A SAM-dependent methyltra 92.5 0.13 4.4E-06 36.2 3.9 94 45-142 33-142 (235)
42 3ofk_A Nodulation protein S; N 92.4 0.14 4.8E-06 36.2 4.0 89 47-140 56-153 (216)
43 2avn_A Ubiquinone/menaquinone 92.3 0.088 3E-06 39.1 2.9 92 45-141 57-152 (260)
44 2o57_A Putative sarcosine dime 91.7 0.15 5.2E-06 38.1 3.7 93 45-141 85-187 (297)
45 1xxl_A YCGJ protein; structura 91.5 0.23 7.8E-06 36.4 4.4 91 46-141 25-124 (239)
46 1nkv_A Hypothetical protein YJ 91.5 0.12 4.1E-06 37.4 2.8 93 46-140 40-139 (256)
47 3m33_A Uncharacterized protein 91.4 0.67 2.3E-05 33.7 6.8 88 46-141 52-142 (226)
48 3gu3_A Methyltransferase; alph 91.0 0.093 3.2E-06 39.7 1.9 95 44-140 24-125 (284)
49 3bus_A REBM, methyltransferase 90.6 0.26 9E-06 36.1 4.0 94 47-141 66-166 (273)
50 1ej0_A FTSJ; methyltransferase 90.4 0.13 4.5E-06 33.8 2.0 94 45-146 25-141 (180)
51 3dli_A Methyltransferase; PSI- 90.3 0.082 2.8E-06 38.5 1.0 91 45-141 44-140 (240)
52 3vc1_A Geranyl diphosphate 2-C 90.1 0.12 4E-06 39.7 1.8 95 46-141 121-221 (312)
53 1ve3_A Hypothetical protein PH 90.0 0.14 4.8E-06 36.1 2.0 94 46-141 42-142 (227)
54 1kpg_A CFA synthase;, cyclopro 89.7 0.23 7.7E-06 37.0 3.0 89 47-141 69-168 (287)
55 1y8c_A S-adenosylmethionine-de 89.3 0.27 9.3E-06 34.8 3.0 93 45-140 40-141 (246)
56 2p35_A Trans-aconitate 2-methy 89.2 0.44 1.5E-05 34.4 4.1 93 45-141 36-132 (259)
57 1vlm_A SAM-dependent methyltra 88.6 0.54 1.9E-05 33.8 4.3 86 46-141 51-139 (219)
58 1p91_A Ribosomal RNA large sub 88.5 0.67 2.3E-05 34.1 4.8 87 47-141 90-178 (269)
59 3ou2_A SAM-dependent methyltra 88.3 0.36 1.2E-05 33.7 3.1 89 45-141 49-146 (218)
60 3bzb_A Uncharacterized protein 87.6 0.53 1.8E-05 36.2 3.9 98 46-143 83-207 (281)
61 3pfg_A N-methyltransferase; N, 87.5 0.58 2E-05 34.3 3.9 91 45-140 53-150 (263)
62 1dus_A MJ0882; hypothetical pr 87.2 0.26 8.9E-06 33.3 1.8 99 45-146 55-162 (194)
63 3g2m_A PCZA361.24; SAM-depende 87.2 0.46 1.6E-05 35.9 3.3 90 46-140 86-189 (299)
64 2fk8_A Methoxy mycolic acid sy 86.9 0.67 2.3E-05 35.2 4.1 89 47-141 95-194 (318)
65 1l3i_A Precorrin-6Y methyltran 86.7 0.23 8E-06 33.5 1.3 108 47-157 38-151 (192)
66 1ri5_A MRNA capping enzyme; me 86.6 0.63 2.2E-05 34.1 3.7 92 47-141 69-174 (298)
67 3bgv_A MRNA CAP guanine-N7 met 86.4 0.66 2.3E-05 35.4 3.9 97 45-141 37-155 (313)
68 1vbf_A 231AA long hypothetical 86.4 0.81 2.8E-05 32.7 4.1 90 46-143 74-167 (231)
69 1ne2_A Hypothetical protein TA 86.0 0.35 1.2E-05 34.2 1.9 102 46-157 55-162 (200)
70 3lbf_A Protein-L-isoaspartate 85.6 1 3.5E-05 31.7 4.2 86 47-141 82-174 (210)
71 2zfu_A Nucleomethylin, cerebra 84.3 0.82 2.8E-05 32.4 3.2 81 46-143 71-153 (215)
72 4gek_A TRNA (CMO5U34)-methyltr 84.3 0.44 1.5E-05 36.9 2.0 91 47-140 75-177 (261)
73 3bxo_A N,N-dimethyltransferase 84.2 1.2 4.1E-05 31.6 4.1 92 45-141 43-141 (239)
74 3htx_A HEN1; HEN1, small RNA m 83.9 0.65 2.2E-05 45.1 3.4 96 47-144 726-836 (950)
75 3e8s_A Putative SAM dependent 83.4 0.92 3.2E-05 31.5 3.2 92 46-141 56-152 (227)
76 3thr_A Glycine N-methyltransfe 83.2 0.79 2.7E-05 34.0 2.9 93 46-140 61-174 (293)
77 3mti_A RRNA methylase; SAM-dep 82.7 0.92 3.1E-05 31.4 2.9 95 45-145 25-139 (185)
78 1tw3_A COMT, carminomycin 4-O- 82.5 0.7 2.4E-05 35.8 2.5 93 46-141 187-288 (360)
79 2yxe_A Protein-L-isoaspartate 82.4 1.6 5.6E-05 30.8 4.2 90 47-143 82-179 (215)
80 2nxc_A L11 mtase, ribosomal pr 82.1 0.77 2.6E-05 34.8 2.5 104 47-157 125-235 (254)
81 2aot_A HMT, histamine N-methyl 81.9 0.74 2.5E-05 34.9 2.4 38 103-140 131-171 (292)
82 1fbn_A MJ fibrillarin homologu 81.7 0.9 3.1E-05 33.2 2.7 89 46-140 78-177 (230)
83 1yzh_A TRNA (guanine-N(7)-)-me 81.5 0.62 2.1E-05 33.5 1.7 108 46-157 45-173 (214)
84 4fsd_A Arsenic methyltransfera 81.2 1.4 4.7E-05 35.4 3.8 96 46-141 87-203 (383)
85 1yb2_A Hypothetical protein TA 81.0 4.4 0.00015 30.5 6.4 92 47-144 115-214 (275)
86 2y1w_A Histone-arginine methyl 80.5 3.5 0.00012 32.8 5.9 89 46-140 54-154 (348)
87 1qzz_A RDMB, aclacinomycin-10- 79.8 0.95 3.2E-05 35.2 2.4 92 45-142 185-288 (374)
88 2ld4_A Anamorsin; methyltransf 79.3 1.2 4.2E-05 30.7 2.6 49 91-140 45-100 (176)
89 3q87_B N6 adenine specific DNA 79.2 1.8 6.1E-05 30.5 3.4 96 45-150 26-132 (170)
90 4e2x_A TCAB9; kijanose, tetron 78.9 0.14 4.9E-06 40.8 -2.6 88 47-140 112-207 (416)
91 3mb5_A SAM-dependent methyltra 78.7 2.3 8E-05 30.9 4.0 105 47-157 98-211 (255)
92 1ws6_A Methyltransferase; stru 78.5 0.3 1E-05 32.7 -0.7 111 46-158 45-163 (171)
93 1jg1_A PIMT;, protein-L-isoasp 77.9 1.1 3.8E-05 32.7 2.2 86 47-141 96-189 (235)
94 2b25_A Hypothetical protein; s 76.5 3.8 0.00013 31.8 4.9 105 47-155 110-234 (336)
95 2ip2_A Probable phenazine-spec 76.4 2.2 7.6E-05 32.6 3.5 94 45-141 170-272 (334)
96 2fpo_A Methylase YHHF; structu 76.3 1.8 6.1E-05 31.3 2.8 99 46-146 58-165 (202)
97 1i9g_A Hypothetical protein RV 76.3 2 6.7E-05 31.8 3.1 90 47-141 104-203 (280)
98 2esr_A Methyltransferase; stru 76.2 0.32 1.1E-05 33.4 -1.1 101 45-145 34-142 (177)
99 2g72_A Phenylethanolamine N-me 76.0 3.2 0.00011 31.1 4.2 49 93-141 155-215 (289)
100 2kw5_A SLR1183 protein; struct 75.7 3.5 0.00012 28.7 4.1 91 45-141 32-131 (202)
101 3g07_A 7SK snRNA methylphospha 74.7 0.94 3.2E-05 34.8 1.0 42 102-143 172-222 (292)
102 2o07_A Spermidine synthase; st 74.1 0.78 2.7E-05 36.5 0.5 97 46-144 99-213 (304)
103 2a14_A Indolethylamine N-methy 74.1 1.5 5.2E-05 32.9 2.0 50 92-141 138-197 (263)
104 1wzn_A SAM-dependent methyltra 74.0 1.5 5.1E-05 31.7 1.9 92 45-139 44-143 (252)
105 3iv6_A Putative Zn-dependent a 74.0 3.7 0.00013 32.7 4.3 96 46-144 49-151 (261)
106 2pt6_A Spermidine synthase; tr 73.4 0.81 2.8E-05 36.7 0.4 96 47-144 121-234 (321)
107 2r3s_A Uncharacterized protein 73.2 4.4 0.00015 30.7 4.4 91 46-141 169-271 (335)
108 1zx0_A Guanidinoacetate N-meth 73.2 6.8 0.00023 28.4 5.3 96 46-143 64-172 (236)
109 1jsx_A Glucose-inhibited divis 72.9 2.5 8.5E-05 29.5 2.8 103 45-155 68-178 (207)
110 3adn_A Spermidine synthase; am 72.8 2.6 8.8E-05 33.6 3.2 96 45-141 86-198 (294)
111 3njr_A Precorrin-6Y methylase; 71.6 3.9 0.00013 29.7 3.7 106 47-157 60-171 (204)
112 1i1n_A Protein-L-isoaspartate 71.6 2.8 9.4E-05 30.0 2.8 94 46-144 81-185 (226)
113 1mjf_A Spermidine synthase; sp 71.5 1.1 3.9E-05 34.7 0.8 95 46-144 79-197 (281)
114 2kyg_C Protein CBFA2T1; protei 71.1 0.69 2.4E-05 29.8 -0.4 16 1-16 2-17 (38)
115 3evz_A Methyltransferase; NYSG 71.0 1.9 6.5E-05 30.8 1.9 68 47-114 60-130 (230)
116 1inl_A Spermidine synthase; be 70.0 1.2 4E-05 35.1 0.6 96 46-143 94-208 (296)
117 2qe6_A Uncharacterized protein 69.8 6.2 0.00021 30.5 4.6 93 46-142 81-197 (274)
118 2b2c_A Spermidine synthase; be 69.7 2.5 8.7E-05 34.0 2.5 96 46-144 112-226 (314)
119 2ift_A Putative methylase HI07 69.6 2.6 8.9E-05 30.4 2.3 98 46-145 57-167 (201)
120 3ocj_A Putative exported prote 68.9 5.5 0.00019 30.3 4.1 92 46-141 122-227 (305)
121 2yvl_A TRMI protein, hypotheti 68.6 6 0.00021 28.2 4.1 87 47-142 96-191 (248)
122 3p9n_A Possible methyltransfer 68.6 2 6.9E-05 30.0 1.5 92 47-141 49-153 (189)
123 3eey_A Putative rRNA methylase 68.3 3.8 0.00013 28.5 2.9 96 47-144 27-142 (197)
124 2pbf_A Protein-L-isoaspartate 65.4 1.9 6.6E-05 30.8 0.9 93 47-143 85-195 (227)
125 2pwy_A TRNA (adenine-N(1)-)-me 65.0 4.1 0.00014 29.3 2.6 89 47-142 101-199 (258)
126 2b3t_A Protein methyltransfera 61.6 20 0.00069 26.8 6.0 68 45-114 112-183 (276)
127 3e05_A Precorrin-6Y C5,15-meth 61.5 3.9 0.00013 28.8 1.9 109 47-157 45-159 (204)
128 2gb4_A Thiopurine S-methyltran 61.2 3.9 0.00013 31.4 2.0 93 45-141 71-191 (252)
129 1iy9_A Spermidine synthase; ro 60.6 3 0.0001 32.4 1.3 98 45-143 78-192 (275)
130 3ggd_A SAM-dependent methyltra 60.3 1.4 4.8E-05 31.8 -0.6 94 45-141 59-163 (245)
131 1o9g_A RRNA methyltransferase; 60.3 5.7 0.0002 29.2 2.7 52 92-143 149-216 (250)
132 1r18_A Protein-L-isoaspartate( 60.0 9.3 0.00032 27.5 3.7 92 46-142 88-195 (227)
133 2bm8_A Cephalosporin hydroxyla 59.3 4.5 0.00016 30.4 2.0 88 47-140 86-186 (236)
134 3q7e_A Protein arginine N-meth 59.1 19 0.00064 28.7 5.7 89 47-139 71-171 (349)
135 1g6q_1 HnRNP arginine N-methyl 58.1 19 0.00066 28.2 5.6 88 47-138 43-142 (328)
136 2fhp_A Methylase, putative; al 57.9 2.4 8.2E-05 28.8 0.3 99 46-144 48-157 (187)
137 3i53_A O-methyltransferase; CO 57.9 13 0.00044 28.5 4.4 91 45-141 172-274 (332)
138 1uwv_A 23S rRNA (uracil-5-)-me 56.9 7.1 0.00024 32.2 3.0 106 47-157 291-405 (433)
139 1pjz_A Thiopurine S-methyltran 56.0 5.8 0.0002 28.6 2.0 88 45-136 25-135 (203)
140 3hem_A Cyclopropane-fatty-acyl 55.2 8.6 0.00029 28.9 3.0 89 47-141 77-183 (302)
141 1o54_A SAM-dependent O-methylt 54.9 13 0.00043 27.8 3.8 90 47-142 117-214 (277)
142 1uir_A Polyamine aminopropyltr 54.8 1.5 5E-05 34.8 -1.4 95 46-143 81-198 (314)
143 1nt2_A Fibrillarin-like PRE-rR 54.0 4.1 0.00014 30.1 1.0 92 45-140 60-160 (210)
144 2vdv_E TRNA (guanine-N(7)-)-me 53.9 11 0.00038 27.7 3.3 97 45-141 52-173 (246)
145 3r0q_C Probable protein argini 53.7 26 0.00087 28.3 5.7 87 47-140 68-168 (376)
146 3u81_A Catechol O-methyltransf 53.1 4.8 0.00016 29.0 1.2 99 47-145 63-176 (221)
147 2ipx_A RRNA 2'-O-methyltransfe 52.6 8.4 0.00029 27.9 2.4 94 45-143 80-184 (233)
148 3gdh_A Trimethylguanosine synt 50.3 8.3 0.00028 27.7 2.1 91 47-140 83-180 (241)
149 3dp7_A SAM-dependent methyltra 49.8 17 0.00058 28.7 4.0 91 45-141 182-287 (363)
150 1g8a_A Fibrillarin-like PRE-rR 49.4 4.4 0.00015 29.0 0.5 90 46-140 77-177 (227)
151 3lpm_A Putative methyltransfer 48.8 27 0.00091 25.9 4.7 113 45-157 52-192 (259)
152 2fyt_A Protein arginine N-meth 48.7 21 0.0007 28.4 4.4 88 47-138 69-168 (340)
153 1fp2_A Isoflavone O-methyltran 45.8 6.2 0.00021 30.8 0.9 88 45-141 191-288 (352)
154 3mcz_A O-methyltransferase; ad 44.8 27 0.00093 26.8 4.4 93 46-141 183-287 (352)
155 1wy7_A Hypothetical protein PH 44.6 11 0.00037 26.3 1.9 105 47-157 54-166 (207)
156 3lst_A CALO1 methyltransferase 43.1 13 0.00043 29.1 2.3 87 47-141 189-286 (348)
157 2jjq_A Uncharacterized RNA met 42.3 10 0.00034 31.9 1.7 100 47-153 295-399 (425)
158 2i7c_A Spermidine synthase; tr 40.8 9.5 0.00033 29.5 1.2 93 46-141 82-192 (283)
159 2vdw_A Vaccinia virus capping 40.0 14 0.00047 29.1 2.1 97 45-141 51-169 (302)
160 3dmg_A Probable ribosomal RNA 39.4 28 0.00097 28.6 3.9 98 46-145 237-344 (381)
161 2qm3_A Predicted methyltransfe 38.7 19 0.00067 28.7 2.8 92 47-142 177-279 (373)
162 4dzr_A Protein-(glutamine-N5) 38.7 8.5 0.00029 26.3 0.6 67 47-113 35-107 (215)
163 1yg2_A Gene activator APHA; vi 38.7 34 0.0012 24.8 3.9 52 43-97 7-58 (179)
164 2fca_A TRNA (guanine-N(7)-)-me 38.6 11 0.00037 27.5 1.2 108 46-157 42-170 (213)
165 3bwc_A Spermidine synthase; SA 38.4 12 0.00042 29.2 1.5 92 47-141 100-210 (304)
166 3ckk_A TRNA (guanine-N(7)-)-me 37.3 18 0.00062 27.2 2.3 112 46-157 50-185 (235)
167 1x19_A CRTF-related protein; m 37.1 61 0.0021 25.1 5.3 89 47-141 195-295 (359)
168 2gpy_A O-methyltransferase; st 36.8 9.9 0.00034 27.4 0.7 93 47-140 59-159 (233)
169 3hp7_A Hemolysin, putative; st 36.7 18 0.00061 29.5 2.3 86 47-140 90-184 (291)
170 3id6_C Fibrillarin-like rRNA/T 36.1 15 0.00052 28.6 1.7 89 48-140 84-180 (232)
171 2frn_A Hypothetical protein PH 36.1 39 0.0014 25.7 4.0 91 47-141 130-225 (278)
172 1xj5_A Spermidine synthase 1; 35.0 56 0.0019 26.4 5.0 95 46-143 124-238 (334)
173 3gwz_A MMCR; methyltransferase 34.3 48 0.0016 26.2 4.4 88 47-140 207-306 (369)
174 2ozv_A Hypothetical protein AT 32.6 33 0.0011 25.8 3.1 69 46-114 40-122 (260)
175 4dcm_A Ribosomal RNA large sub 32.5 51 0.0017 26.9 4.4 99 45-145 225-338 (375)
176 1fp1_D Isoliquiritigenin 2'-O- 32.4 14 0.00049 29.1 1.0 86 46-140 213-305 (372)
177 2xyq_A Putative 2'-O-methyl tr 32.4 26 0.00088 28.3 2.6 93 50-157 79-188 (290)
178 1u2z_A Histone-lysine N-methyl 32.1 17 0.00059 31.2 1.6 92 47-140 247-358 (433)
179 3dxy_A TRNA (guanine-N(7)-)-me 29.8 27 0.00094 25.8 2.2 97 46-145 38-154 (218)
180 2bop_A Protein (E2); protein-D 29.7 18 0.00062 25.5 1.1 33 136-168 3-36 (85)
181 1f9f_A Regulatory protein E2; 29.6 19 0.00066 25.3 1.2 34 136-169 7-41 (83)
182 2pjd_A Ribosomal RNA small sub 28.8 46 0.0016 26.1 3.4 95 45-142 199-304 (343)
183 3opn_A Putative hemolysin; str 28.7 7.3 0.00025 29.6 -1.2 90 45-141 40-137 (232)
184 3s93_A Tudor domain-containing 28.2 11 0.00036 27.2 -0.3 51 99-156 42-94 (102)
185 3rco_A Tudor domain-containing 28.0 18 0.00061 25.9 0.8 65 76-147 11-87 (89)
186 3a27_A TYW2, uncharacterized p 27.7 31 0.0011 26.3 2.2 94 47-144 124-222 (272)
187 1af7_A Chemotaxis receptor met 27.7 31 0.001 27.3 2.2 38 105-142 211-252 (274)
188 3f8b_A Transcriptional regulat 27.1 70 0.0024 22.0 3.8 52 43-97 17-68 (116)
189 3eag_A UDP-N-acetylmuramate:L- 26.3 55 0.0019 25.8 3.4 93 47-144 10-118 (326)
190 2q4a_A Clavaminate synthase-li 26.1 15 0.0005 28.9 0.1 66 93-159 7-87 (330)
191 1uf3_A Hypothetical protein TT 25.7 71 0.0024 22.0 3.6 10 91-100 8-17 (228)
192 1dbd_A Regulatory protein E2; 25.5 29 0.00098 25.3 1.5 34 136-169 18-52 (100)
193 2gso_A Phosphodiesterase-nucle 23.0 40 0.0014 26.4 2.0 36 109-144 9-49 (393)
194 1whs_B Serine carboxypeptidase 21.9 30 0.001 25.1 1.0 13 40-52 16-28 (153)
195 3l46_A Protein ECT2; alternati 21.5 34 0.0011 24.4 1.2 23 133-155 23-45 (112)
196 4az3_B Lysosomal protective pr 20.6 32 0.0011 24.7 1.0 13 40-52 17-29 (155)
197 2pe4_A Hyaluronidase-1; hyalur 20.3 34 0.0012 30.5 1.3 46 91-141 250-304 (424)
198 3iec_E 120 kDa protein, cytoto 20.2 24 0.00081 27.2 0.2 23 139-161 65-87 (125)
No 1
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.07 E-value=0.0068 Score=43.36 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=62.2
Q ss_pred hhhccCCCchhhhhhhhcccc-cccccccccCCchhhHHHHHHHH-h---------cceeeeeecCcccccCCceeEEEe
Q 038126 45 VRTGRDPETCSVVCKLLKEED-NEAWGVEPFDSDDADANRMSLVR-K---------GIVQATDIKFPLAFRAKSFSLAIV 113 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~-tEAWGVEPyd~edad~~CksLVr-K---------GiVRvADIkfpLPYR~KSFSlViV 113 (169)
+.|.+|-.+......|.+... .+..|||+.+ ++-..++...+ . =-+..+|+ .-+|....+|.+|+.
T Consensus 32 ~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~~ 108 (219)
T 3jwg_A 32 KVIDLGCGEGNLLSLLLKDKSFEQITGVDVSY--SVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAATV 108 (219)
T ss_dssp EEEEETCTTCHHHHHHHTSTTCCEEEEEESCH--HHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEEE
T ss_pred EEEEecCCCCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEEE
Confidence 348889999888887776543 6888998753 22233333222 1 23445677 346777789999999
Q ss_pred cccccccCC----CCchhhhhcccC-ceEEEe
Q 038126 114 SDAVDYLSP----KTLPELARVSAD-GVVIFA 140 (169)
Q Consensus 114 SDalDyLsp----kTLPeLaRvsad-glVif~ 140 (169)
++.+.|+.+ +.|-++.|+-.. |++|++
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 109 IEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 999999974 567778887654 544443
No 2
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.06 E-value=0.0028 Score=46.38 Aligned_cols=93 Identities=10% Similarity=0.091 Sum_probs=64.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH--hcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR--KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr--KGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
+.|-+|..+-.+...|++....+..||++.+ +.-..++...+ +--+..+|+. .+|+...+|.+|+.++++.++..
T Consensus 47 ~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 123 (253)
T 3g5l_A 47 TVLDLGCGFGWHCIYAAEHGAKKVLGIDLSE--RMLTEAKRKTTSPVVCYEQKAIE-DIAIEPDAYNVVLSSLALHYIAS 123 (253)
T ss_dssp EEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHCCCTTEEEEECCGG-GCCCCTTCEEEEEEESCGGGCSC
T ss_pred EEEEECCCCCHHHHHHHHcCCCEEEEEECCH--HHHHHHHHhhccCCeEEEEcchh-hCCCCCCCeEEEEEchhhhhhhh
Confidence 3488898888887777777555888888643 22222333222 1234566763 57777899999999999999954
Q ss_pred --CCchhhhhc-ccCceEEEe
Q 038126 123 --KTLPELARV-SADGVVIFA 140 (169)
Q Consensus 123 --kTLPeLaRv-sadglVif~ 140 (169)
+.|-++.|+ ..+|.++++
T Consensus 124 ~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 124 FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEE
Confidence 777888885 456777775
No 3
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.05 E-value=0.0027 Score=45.99 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=63.5
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHH----HhcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLV----RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLV----rKGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|.+|..|-.....|++. ..+..||++.+ +.-..++... .+--+..+|+ ..+|+...+|++|+.++++.++
T Consensus 42 ~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 42 VFLELGVGTGRIALPLIAR-GYRYIALDADA--AMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp EEEEETCTTSTTHHHHHTT-TCEEEEEESCH--HHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCGGGC
T ss_pred EEEEeCCcCCHHHHHHHHC-CCEEEEEECCH--HHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCchhhc
Confidence 4477788776666666654 56788888753 1222222222 1223456677 4578888899999999999999
Q ss_pred CC--CCchhhhhcc-cCceEEEecCCcc
Q 038126 121 SP--KTLPELARVS-ADGVVIFAGYPHQ 145 (169)
Q Consensus 121 sp--kTLPeLaRvs-adglVif~G~Pgq 145 (169)
.. +.|.++.|+- .+|.+++. ++..
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~-~~~~ 144 (263)
T 2yqz_A 118 PDWPKVLAEAIRVLKPGGALLEG-WDQA 144 (263)
T ss_dssp TTHHHHHHHHHHHEEEEEEEEEE-EEEE
T ss_pred CCHHHHHHHHHHHCCCCcEEEEE-ecCC
Confidence 64 7788888875 46777776 4443
No 4
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=96.05 E-value=0.003 Score=45.94 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=66.9
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHh--cceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRK--GIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrK--GiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|-+|..+-.....|.+.-..+..||++.+ ++-+..+++..--. =-+..+|+ ..+|+...+|++|+...++.++
T Consensus 49 ~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~ 127 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEGAIYNI 127 (257)
T ss_dssp EEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEESCSCCC
T ss_pred eEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecChHhhc
Confidence 4488888888887777777656888988754 23344444332111 12456787 6778888999999999999999
Q ss_pred CC-CCchhhhhc-ccCceEEEec
Q 038126 121 SP-KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 sp-kTLPeLaRv-sadglVif~G 141 (169)
.+ +.|-++.|+ ..+|.++++.
T Consensus 128 ~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 128 GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEEEEE
Confidence 65 777888885 4567777664
No 5
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.98 E-value=0.0057 Score=41.69 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=59.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEec-ccccccCC--
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVS-DAVDYLSP-- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVS-DalDyLsp-- 122 (169)
.|.+|..+......|.+. ..+..|+|+.+ ++-..++....+--+..+|+.- +|+...+|++|+.+ +.+.++++
T Consensus 50 vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~~~~~ 125 (195)
T 3cgg_A 50 ILDAGCGQGRIGGYLSKQ-GHDVLGTDLDP--ILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFLAEDG 125 (195)
T ss_dssp EEEETCTTTHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGSCHHH
T ss_pred EEEECCCCCHHHHHHHHC-CCcEEEEcCCH--HHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhcChHH
Confidence 388899888877777765 56777777542 1222222222222344566543 45667899999998 89999865
Q ss_pred --CCchhhhhcc-cCceEEEec
Q 038126 123 --KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 --kTLPeLaRvs-adglVif~G 141 (169)
+.|.++.|+- .+|.+++.-
T Consensus 126 ~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 126 REPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEe
Confidence 5667777764 456666654
No 6
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.96 E-value=0.0084 Score=40.92 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=68.3
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHh-cceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRK-GIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrK-GiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|-+|..+......|.+.- ..+..|+|+.+ ++-+..+.+.+--. .++...|..-++|.-..+|++|+.+..+.+ +
T Consensus 30 ldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~~--~ 107 (178)
T 3hm2_A 30 WDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLTA--P 107 (178)
T ss_dssp EEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TTC--T
T ss_pred EEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcccH--H
Confidence 777888877766666653 67788888754 33444444332111 233446665567765589999999998887 7
Q ss_pred CCchhhhhc-ccCceEEEecCCcchhhh-hhhhhhcC
Q 038126 123 KTLPELARV-SADGVVIFAGYPHQQRAK-VSELSKFG 157 (169)
Q Consensus 123 kTLPeLaRv-sadglVif~G~Pgqqrak-vaelskfg 157 (169)
+.+.++.|+ ..+|.+++.......... ...+.+.|
T Consensus 108 ~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 108 GVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp THHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 788888884 667888887754333222 33344444
No 7
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.85 E-value=0.0076 Score=42.46 Aligned_cols=92 Identities=13% Similarity=0.031 Sum_probs=62.7
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC---
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP--- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp--- 122 (169)
.|.+|-.+......|.+. ..+..||++.+ +.-..++....+--+..+|+. .+|+...+|.+|+..++|.++++
T Consensus 45 vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (203)
T 3h2b_A 45 ILDVGSGTGRWTGHLASL-GHQIEGLEPAT--RLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMGPGEL 120 (203)
T ss_dssp EEEETCTTCHHHHHHHHT-TCCEEEECCCH--HHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCCTTTH
T ss_pred EEEecCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCCHHHH
Confidence 388888888877777665 66889998743 222223322222334566663 46777899999999999999975
Q ss_pred -CCchhhhhccc-CceEEEec
Q 038126 123 -KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 -kTLPeLaRvsa-dglVif~G 141 (169)
+.|-++.|+-. +|.++++-
T Consensus 121 ~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 121 PDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp HHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEE
Confidence 66778887655 56666654
No 8
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.73 E-value=0.0063 Score=44.15 Aligned_cols=98 Identities=13% Similarity=0.002 Sum_probs=63.9
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHH--HHHhcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMS--LVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~Cks--LVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|-+|..+......|.+ ...+..||++.+ ++-+..+.+. +..+=-+..+|+.-..| ..+|.+|+.+..+.++
T Consensus 69 ~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP--TELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC--SSCEEEEEEESSTTTS
T ss_pred CEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC--CCCeeEEEEChhhhcC
Confidence 448888888877776665 556788887653 2223333322 11112355677754333 3499999999999999
Q ss_pred CC----CCchhhhh-cccCceEEEecCCcc
Q 038126 121 SP----KTLPELAR-VSADGVVIFAGYPHQ 145 (169)
Q Consensus 121 sp----kTLPeLaR-vsadglVif~G~Pgq 145 (169)
.+ +.|-++.| +..+|.+++..++..
T Consensus 146 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 146 EPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp CGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 86 56777777 566888888776543
No 9
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=95.63 E-value=0.0045 Score=43.49 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=62.7
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
+.|.+|..+......++.+...+..||++.+ ++-+..+++..-.+--+..+|+. .+|+...+|++|+.++.+.|+++
T Consensus 26 ~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 104 (209)
T 2p8j_A 26 TVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGTIFHMRK 104 (209)
T ss_dssp EEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSCGGGSCH
T ss_pred EEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcChHHhCCH
Confidence 3477888777765666666677888888653 22233333221111234556764 46777889999999999999964
Q ss_pred ----CCchhhhhcc-cCceEEEec
Q 038126 123 ----KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 ----kTLPeLaRvs-adglVif~G 141 (169)
+.|.++.|+- .+|.+++.-
T Consensus 105 ~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 105 NDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 6677777764 467777665
No 10
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=95.48 E-value=0.015 Score=41.67 Aligned_cols=94 Identities=12% Similarity=-0.002 Sum_probs=61.9
Q ss_pred hhhccCCCchhhhhhhhcccc-cccccccccCCchhhHHHHHHHH----------hcceeeeeecCcccccCCceeEEEe
Q 038126 45 VRTGRDPETCSVVCKLLKEED-NEAWGVEPFDSDDADANRMSLVR----------KGIVQATDIKFPLAFRAKSFSLAIV 113 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~-tEAWGVEPyd~edad~~CksLVr----------KGiVRvADIkfpLPYR~KSFSlViV 113 (169)
+.|.+|..+......|.+... .+..||++.+ ++-..++...+ +--+..+|+. -+|....+|++|+.
T Consensus 32 ~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 32 RVIDLGCGQGNLLKILLKDSFFEQITGVDVSY--RSLEIAQERLDRLRLPRNQWERLQLIQGALT-YQDKRFHGYDAATV 108 (217)
T ss_dssp EEEEETCTTCHHHHHHHHCTTCSEEEEEESCH--HHHHHHHHHHTTCCCCHHHHTTEEEEECCTT-SCCGGGCSCSEEEE
T ss_pred EEEEeCCCCCHHHHHHHhhCCCCEEEEEECCH--HHHHHHHHHHHHhcCCcccCcceEEEeCCcc-cccccCCCcCEEee
Confidence 348889999888888777543 5888988752 22233333222 2224456663 34556689999999
Q ss_pred cccccccCC----CCchhhhhccc-CceEEEec
Q 038126 114 SDAVDYLSP----KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 114 SDalDyLsp----kTLPeLaRvsa-dglVif~G 141 (169)
++++.|+.+ +.|-++.|+-. +|++|++-
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 109 IEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999999975 56777777655 56555553
No 11
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.18 E-value=0.019 Score=40.70 Aligned_cols=94 Identities=14% Similarity=0.066 Sum_probs=63.4
Q ss_pred hccCCCchhhhhhhhccc--ccccccccccC--CchhhHHHHHHH-HhcceeeeeecCcccccCCceeEEEecccccccC
Q 038126 47 TGRDPETCSVVCKLLKEE--DNEAWGVEPFD--SDDADANRMSLV-RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe--~tEAWGVEPyd--~edad~~CksLV-rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
|.+|..+......|++.. ..+.+||++.+ ++.+..+.+..- .+--+..+|+ ..+|+...+|++|+.++.+.++.
T Consensus 42 LDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~ 120 (219)
T 3dh0_A 42 LDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIPLPDNTVDFIFMAFTFHELS 120 (219)
T ss_dssp EESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCSSCSSCEEEEEEESCGGGCS
T ss_pred EEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCCCCCCCeeEEEeehhhhhcC
Confidence 788888888777777764 56889998643 222333332221 1112345565 34677789999999999999996
Q ss_pred C--CCchhhhhcc-cCceEEEec
Q 038126 122 P--KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 122 p--kTLPeLaRvs-adglVif~G 141 (169)
. ..|-++.|+- .+|.++++.
T Consensus 121 ~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 121 EPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp SHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEE
Confidence 5 7788888864 567777764
No 12
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=94.98 E-value=0.037 Score=38.73 Aligned_cols=92 Identities=14% Similarity=0.227 Sum_probs=63.3
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeec-CcccccCCceeEEEecccccccCC-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIK-FPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIk-fpLPYR~KSFSlViVSDalDyLsp- 122 (169)
+.|.+|..+-.....|.+. ..+..|+|+.+ +.-..++... .-+..+|+. +.+|+...+|++|+.++.+.++..
T Consensus 35 ~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~--~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 35 EVLDIGCSSGALGAAIKEN-GTRVSGIEAFP--EAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp EEEEETCTTSHHHHHHHTT-TCEEEEEESSH--HHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cEEEeCCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 4588999988888888777 57788887643 1111222111 134566764 457888899999999999999976
Q ss_pred -CCchhhhhcc-cCceEEEec
Q 038126 123 -KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 -kTLPeLaRvs-adglVif~G 141 (169)
+.|-++.|+- .+|.++++-
T Consensus 110 ~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 110 WAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp HHHHHHTGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEe
Confidence 6777888864 466766653
No 13
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=94.60 E-value=0.014 Score=45.62 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=60.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhc-ceeeeeecCcccccCCceeEEEecccccccCC-C
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKG-IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-K 123 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKG-iVRvADIkfpLPYR~KSFSlViVSDalDyLsp-k 123 (169)
.|-||-.|-. .+..|.+...+..||+|.+- .-..++. +.+ -..++|.. .+|+...||.+|+++.++.++.+ +
T Consensus 43 vLDvGcGtG~-~~~~l~~~~~~v~gvD~s~~--ml~~a~~--~~~v~~~~~~~e-~~~~~~~sfD~v~~~~~~h~~~~~~ 116 (257)
T 4hg2_A 43 ALDCGCGSGQ-ASLGLAEFFERVHAVDPGEA--QIRQALR--HPRVTYAVAPAE-DTGLPPASVDVAIAAQAMHWFDLDR 116 (257)
T ss_dssp EEEESCTTTT-THHHHHTTCSEEEEEESCHH--HHHTCCC--CTTEEEEECCTT-CCCCCSSCEEEEEECSCCTTCCHHH
T ss_pred EEEEcCCCCH-HHHHHHHhCCEEEEEeCcHH--hhhhhhh--cCCceeehhhhh-hhcccCCcccEEEEeeehhHhhHHH
Confidence 3666666644 44555566678999988641 1111111 112 13344542 46778999999999999999987 8
Q ss_pred Cchhhhhc-ccCceEEEecC
Q 038126 124 TLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 124 TLPeLaRv-sadglVif~G~ 142 (169)
.+.|++|| ..+|++++.+|
T Consensus 117 ~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 117 FWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEC
Confidence 99999997 45677777664
No 14
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=94.49 E-value=0.032 Score=38.15 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=61.3
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
+.|.+|..+......|.+... +..|||+.+ +.-..++....+=-+..+| +|+...+|++|+.++.+.++..
T Consensus 20 ~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~--~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~~~~~ 92 (170)
T 3i9f_A 20 VIVDYGCGNGFYCKYLLEFAT-KLYCIDINV--IALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDMDDKQ 92 (170)
T ss_dssp EEEEETCTTCTTHHHHHTTEE-EEEEECSCH--HHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTCSCHH
T ss_pred eEEEECCCCCHHHHHHHhhcC-eEEEEeCCH--HHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhcccCHH
Confidence 348888888877777776664 888888653 2233333332222233445 7777899999999999999954
Q ss_pred CCchhhhhcc-cCceEEEec
Q 038126 123 KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 kTLPeLaRvs-adglVif~G 141 (169)
+.|-++.|+- .+|.++++.
T Consensus 93 ~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 93 HVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 6777888764 567777765
No 15
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=94.30 E-value=0.034 Score=39.72 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=56.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEec-ccccccC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVS-DAVDYLS 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVS-DalDyLs 121 (169)
+.|.+|..+......|++. .+..|||+.+ ++-+..+.+..-.+--+..+|+. .+|.. .+|.+|+.. |.+.|+.
T Consensus 36 ~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~~~~~~ 111 (243)
T 3d2l_A 36 RIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMR-ELELP-EPVDAITILCDSLNYLQ 111 (243)
T ss_dssp EEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGG-GCCCS-SCEEEEEECTTGGGGCC
T ss_pred eEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChh-hcCCC-CCcCEEEEeCCchhhcC
Confidence 4488888887776666665 7888888643 22233332221111123455653 23433 789999987 5999994
Q ss_pred C-----CCchhhhhc-ccCceEEEe
Q 038126 122 P-----KTLPELARV-SADGVVIFA 140 (169)
Q Consensus 122 p-----kTLPeLaRv-sadglVif~ 140 (169)
+ +.|-++.|+ ..+|.+++.
T Consensus 112 ~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 112 TEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp SHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3 456667775 556777763
No 16
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=94.20 E-value=0.014 Score=42.16 Aligned_cols=94 Identities=13% Similarity=0.193 Sum_probs=62.1
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
.|.+|-.+-.+...|++....+..||++.+ ++-+..+++.. .+--+...|+. .+|+...+|++|+.++.|.|+++
T Consensus 97 vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~~ 174 (254)
T 1xtp_A 97 ALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASME-TATLPPNTYDLIVIQWTAIYLTDA 174 (254)
T ss_dssp EEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGG-GCCCCSSCEEEEEEESCGGGSCHH
T ss_pred EEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHH-HCCCCCCCeEEEEEcchhhhCCHH
Confidence 378888888887777776655677887542 22233332221 12233445654 36777889999999999999975
Q ss_pred ---CCchhhhhccc-CceEEEec
Q 038126 123 ---KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 ---kTLPeLaRvsa-dglVif~G 141 (169)
+.|-++.|+-. +|.++++-
T Consensus 175 ~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 175 DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEEe
Confidence 66777777654 67777765
No 17
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.18 E-value=0.039 Score=40.53 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=60.6
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHH-Hhc----ceeeeeecCcccccCCceeEEEeccccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLV-RKG----IVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLV-rKG----iVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
.|-+|..+-.+...|.+. ..+..|+++.+ +.-..++... +.| -+..+|+. .+|+...+|++|+...++.++
T Consensus 41 vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~~l~~~ 116 (260)
T 1vl5_A 41 VLDVATGGGHVANAFAPF-VKKVVAFDLTE--DILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFHIVTCRIAAHHF 116 (260)
T ss_dssp EEEETCTTCHHHHHHGGG-SSEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEESCGGGC
T ss_pred EEEEeCCCCHHHHHHHHh-CCEEEEEeCCH--HHHHHHHHHHHhcCCCceEEEEecHH-hCCCCCCCEEEEEEhhhhHhc
Confidence 377777776665555544 35888887653 1222222222 223 24566764 367778899999999999999
Q ss_pred CC--CCchhhhhcc-cCceEEEec
Q 038126 121 SP--KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 121 sp--kTLPeLaRvs-adglVif~G 141 (169)
.. +.|.++.|+- .+|.++++.
T Consensus 117 ~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 117 PNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 75 7888999875 567777763
No 18
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=94.18 E-value=0.045 Score=38.71 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=58.4
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--C
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP--K 123 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp--k 123 (169)
.|.+|..+-.....| ...+..||++.+ +.-..++.....--+..+|+. .+|+...+|++|+.++.++++.. +
T Consensus 40 vLdiG~G~G~~~~~l---~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~~~~ 113 (211)
T 2gs9_A 40 LLEVGAGTGYWLRRL---PYPQKVGVEPSE--AMLAVGRRRAPEATWVRAWGE-ALPFPGESFDVVLLFTTLEFVEDVER 113 (211)
T ss_dssp EEEETCTTCHHHHHC---CCSEEEEECCCH--HHHHHHHHHCTTSEEECCCTT-SCCSCSSCEEEEEEESCTTTCSCHHH
T ss_pred EEEECCCCCHhHHhC---CCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcccc-cCCCCCCcEEEEEEcChhhhcCCHHH
Confidence 477888877766555 222678887643 122222222222234556664 47788889999999999999965 6
Q ss_pred Cchhhhhccc-CceEEEec
Q 038126 124 TLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 124 TLPeLaRvsa-dglVif~G 141 (169)
.|-++.|+-. +|.++++.
T Consensus 114 ~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 114 VLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEe
Confidence 7888888754 66777665
No 19
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=94.10 E-value=0.042 Score=41.07 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=63.3
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHH-Hhcc-----eeeeeecCcccccCCceeEEEecccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLV-RKGI-----VQATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLV-rKGi-----VRvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
.|-+|..+-.....|.+. ..+..|||+.+ +.-..++... ..|+ +..+|+.-..++-..+|++|+.++.+.|
T Consensus 72 vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~ 148 (285)
T 4htf_A 72 VLDAGGGEGQTAIKMAER-GHQVILCDLSA--QMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEW 148 (285)
T ss_dssp EEEETCTTCHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGG
T ss_pred EEEeCCcchHHHHHHHHC-CCEEEEEECCH--HHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhc
Confidence 378888888777777665 67888988753 2222222222 2233 5567776554577899999999999999
Q ss_pred cCC--CCchhhhhccc-CceEEEec
Q 038126 120 LSP--KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 120 Lsp--kTLPeLaRvsa-dglVif~G 141 (169)
+.. +.|.++.|+-. +|+++++-
T Consensus 149 ~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 149 VADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp CSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 975 78888888766 45655543
No 20
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=94.09 E-value=0.025 Score=41.30 Aligned_cols=96 Identities=10% Similarity=0.027 Sum_probs=64.3
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHH-HHhcceeeeeecCcccccCCceeEEEecccccccC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSL-VRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksL-VrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
+.|.+|-.+......|++....+..|||+.+ ++-+..+.+.. ..+--+..+|+. .+|+...+|++||..++|.|+.
T Consensus 82 ~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 160 (241)
T 2ex4_A 82 CALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ-DFTPEPDSYDVIWIQWVIGHLT 160 (241)
T ss_dssp EEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGG-GCCCCSSCEEEEEEESCGGGSC
T ss_pred EEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChh-hcCCCCCCEEEEEEcchhhhCC
Confidence 4478888888888888877666888887643 23333333322 111234556653 4566677999999999999998
Q ss_pred C----CCchhhhhcc-cCceEEEec
Q 038126 122 P----KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 122 p----kTLPeLaRvs-adglVif~G 141 (169)
+ +.|-++.|+- .+|.++++-
T Consensus 161 ~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 161 DQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 6 5677777764 467777754
No 21
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=94.06 E-value=0.016 Score=41.63 Aligned_cols=93 Identities=12% Similarity=0.063 Sum_probs=60.5
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHH---hcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVR---KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVr---KGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|.+|..+......|++.- ..+..|||+.+ +.-..++.... +--+..+|+. .+|+. .+|.+|+.++.+.++
T Consensus 47 ~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 47 DILDLGAGTGLLSAFLMEKYPEATFTLVDMSE--KMLEIAKNRFRGNLKVKYIEADYS-KYDFE-EKYDMVVSALSIHHL 122 (234)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCEEEEEESCH--HHHHHHHHHTCSCTTEEEEESCTT-TCCCC-SCEEEEEEESCGGGS
T ss_pred eEEEecCCCCHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHhhccCCCEEEEeCchh-ccCCC-CCceEEEEeCccccC
Confidence 34888988888877777654 66788888743 12222222222 1223445653 33444 899999999999999
Q ss_pred CC----CCchhhhhc-ccCceEEEec
Q 038126 121 SP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRv-sadglVif~G 141 (169)
++ ..|-++.|+ ..+|.++++-
T Consensus 123 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 76 368888886 4567777654
No 22
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=93.99 E-value=0.032 Score=37.69 Aligned_cols=107 Identities=8% Similarity=0.061 Sum_probs=68.3
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH-HhcceeeeeecCcccccCCceeEEEecccccccCCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV-RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSPK 123 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV-rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLspk 123 (169)
|.+|..+..+...|.+ ...+..|+|+.+ ++-+..+++..- .+=-+..+|+.- |+...+|++|+..+. ..-++
T Consensus 40 LdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~~D~i~~~~~--~~~~~ 114 (183)
T 2yxd_A 40 VDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED--VLDKLEFNKAFIGGT--KNIEK 114 (183)
T ss_dssp EEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH--HGGGCCCSEEEECSC--SCHHH
T ss_pred EEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc--cccCCCCcEEEECCc--ccHHH
Confidence 7888888877777776 777888888653 233333333211 011234456554 444579999999887 11237
Q ss_pred CchhhhhcccCceEEEec-CCcchhhhhhhhhhcCCc
Q 038126 124 TLPELARVSADGVVIFAG-YPHQQRAKVSELSKFGRP 159 (169)
Q Consensus 124 TLPeLaRvsadglVif~G-~Pgqqrakvaelskfgrp 159 (169)
.+.++.|+ .+|.+++.. .+.+...-...+.+.|.-
T Consensus 115 ~l~~~~~~-~gG~l~~~~~~~~~~~~~~~~l~~~g~~ 150 (183)
T 2yxd_A 115 IIEILDKK-KINHIVANTIVLENAAKIINEFESRGYN 150 (183)
T ss_dssp HHHHHHHT-TCCEEEEEESCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHhhC-CCCEEEEEecccccHHHHHHHHHHcCCe
Confidence 78888999 999998887 455554555667777743
No 23
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.83 E-value=0.052 Score=37.69 Aligned_cols=95 Identities=13% Similarity=0.133 Sum_probs=64.3
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhc--ceeeeeecCcccccCCceeEEEecccccccC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKG--IVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKG--iVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
.|.+|..+......|++....+..|+|+.+ ++.+..+.+..--.. -+..+|+. .+|+...+|.+|+.++.+.|+.
T Consensus 47 vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~~~l~~~~ 125 (219)
T 3dlc_A 47 CIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH-NIPIEDNYADLIVSRGSVFFWE 125 (219)
T ss_dssp EEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT-BCSSCTTCEEEEEEESCGGGCS
T ss_pred EEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH-HCCCCcccccEEEECchHhhcc
Confidence 378899998888778776567888887643 222333332221111 13456663 4677789999999999999995
Q ss_pred C--CCchhhhhc-ccCceEEEec
Q 038126 122 P--KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 122 p--kTLPeLaRv-sadglVif~G 141 (169)
. +.|.++.|+ ..+|.+++..
T Consensus 126 ~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 126 DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhCCCCCEEEEEe
Confidence 5 778888886 4567777764
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=93.74 E-value=0.062 Score=37.92 Aligned_cols=91 Identities=9% Similarity=0.052 Sum_probs=59.9
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
.|.+|..+......|.+. ..+..||++.+ +.-..++.... +--+..+|+.-. .-..+|++|+.+++|.|+..
T Consensus 46 vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~~~~~ 120 (250)
T 2p7i_A 46 LLELGSFKGDFTSRLQEH-FNDITCVEASE--EAISHAQGRLKDGITYIHSRFEDA--QLPRRYDNIVLTHVLEHIDDPV 120 (250)
T ss_dssp EEEESCTTSHHHHHHTTT-CSCEEEEESCH--HHHHHHHHHSCSCEEEEESCGGGC--CCSSCEEEEEEESCGGGCSSHH
T ss_pred EEEECCCCCHHHHHHHHh-CCcEEEEeCCH--HHHHHHHHhhhCCeEEEEccHHHc--CcCCcccEEEEhhHHHhhcCHH
Confidence 488898888777666654 45788887653 22222222222 223445666443 24678999999999999965
Q ss_pred CCchhhh-hccc-CceEEEec
Q 038126 123 KTLPELA-RVSA-DGVVIFAG 141 (169)
Q Consensus 123 kTLPeLa-Rvsa-dglVif~G 141 (169)
+.|-++. |+-. +|.++++-
T Consensus 121 ~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 121 ALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp HHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEc
Confidence 7888888 8754 56666654
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=93.69 E-value=0.025 Score=40.59 Aligned_cols=93 Identities=17% Similarity=0.152 Sum_probs=61.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh-c-ceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK-G-IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK-G-iVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
+.|.+|..+-.....|.+. ..+..||++.+ ++-..++..... + -+..+|+. .+|+...+|.+|+..+.+.++..
T Consensus 56 ~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 131 (242)
T 3l8d_A 56 EVLDVGCGDGYGTYKLSRT-GYKAVGVDISE--VMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEWTEE 131 (242)
T ss_dssp EEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTSSSC
T ss_pred eEEEEcCCCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhhccC
Confidence 3488898888777777665 56788887642 222222222111 1 23445654 46777899999999999999965
Q ss_pred --CCchhhhhccc-CceEEEec
Q 038126 123 --KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 --kTLPeLaRvsa-dglVif~G 141 (169)
+.|.++.|+-. +|.++++-
T Consensus 132 ~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 132 PLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEEEE
Confidence 67888888765 56666654
No 26
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=93.54 E-value=0.03 Score=42.45 Aligned_cols=94 Identities=6% Similarity=0.058 Sum_probs=65.0
Q ss_pred hhhccCCCchhhhhhhhc--ccccccccccccC--CchhhHHHHHH---HHhcceeeeeecCcccccC------CceeEE
Q 038126 45 VRTGRDPETCSVVCKLLK--EEDNEAWGVEPFD--SDDADANRMSL---VRKGIVQATDIKFPLAFRA------KSFSLA 111 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLk--Ee~tEAWGVEPyd--~edad~~CksL---VrKGiVRvADIkfpLPYR~------KSFSlV 111 (169)
+.|-+|-.+-.....|++ ....+..||++.+ ++-+..+++.. ..+=-+..+|+. -+|+.. .+|.+|
T Consensus 39 ~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~~~~~~fD~V 117 (299)
T 3g5t_A 39 LLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD-DFKFLGADSVDKQKIDMI 117 (299)
T ss_dssp EEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT-CCGGGCTTTTTSSCEEEE
T ss_pred EEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH-hCCccccccccCCCeeEE
Confidence 457888888888777776 5678899998754 33344444433 222234567764 355555 799999
Q ss_pred EecccccccCC-CCchhhhhcc-cCceEEE
Q 038126 112 IVSDAVDYLSP-KTLPELARVS-ADGVVIF 139 (169)
Q Consensus 112 iVSDalDyLsp-kTLPeLaRvs-adglVif 139 (169)
+.+.++.++.+ +.|.++.|+- .+|.+++
T Consensus 118 ~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 118 TAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred eHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 99999999955 7888888865 4567766
No 27
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=93.53 E-value=0.066 Score=37.97 Aligned_cols=92 Identities=8% Similarity=-0.051 Sum_probs=61.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
+.|.+|..+..+...|++. ..+..||++.+ +.-..++... .--+...|+. .+| ...+|.+|+.++.|.|+.+
T Consensus 46 ~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~-~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~~~~ 119 (211)
T 3e23_A 46 KILELGCGAGYQAEAMLAA-GFDVDATDGSP--ELAAEASRRL-GRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVPRDE 119 (211)
T ss_dssp EEEESSCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHH-TSCCEECCGG-GCC-CCSCEEEEEECSCGGGSCHHH
T ss_pred cEEEECCCCCHHHHHHHHc-CCeEEEECCCH--HHHHHHHHhc-CCceEEeeec-cCC-CCCcEEEEEecCchhhcCHHH
Confidence 3488899998887777765 55788887643 2222333322 2234556664 345 6789999999999999974
Q ss_pred --CCchhhhhccc-CceEEEecC
Q 038126 123 --KTLPELARVSA-DGVVIFAGY 142 (169)
Q Consensus 123 --kTLPeLaRvsa-dglVif~G~ 142 (169)
+.|-++.|+-. +|.++++-.
T Consensus 120 ~~~~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 120 LADVLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEc
Confidence 67888888754 566666543
No 28
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=93.40 E-value=0.079 Score=37.81 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=61.2
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh-c-ceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK-G-IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK-G-iVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
+.|.+|..+-.+...|++....+..||++.+ +.-..++..... + -+..+|+.- +|+...+|.+|+.++.+.++..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~ 122 (243)
T 3bkw_A 46 RIVDLGCGFGWFCRWAHEHGASYVLGLDLSE--KMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHYVED 122 (243)
T ss_dssp EEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGGCSC
T ss_pred EEEEEcCcCCHHHHHHHHCCCCeEEEEcCCH--HHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccccch
Confidence 3488898888877777766444788887642 222222222221 1 234556643 5666889999999999999964
Q ss_pred --CCchhhhhcc-cCceEEEec
Q 038126 123 --KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 --kTLPeLaRvs-adglVif~G 141 (169)
+.|-++.|+- .+|.++++-
T Consensus 123 ~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 123 VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCcCcEEEEEe
Confidence 6777777764 466666643
No 29
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.34 E-value=0.074 Score=39.75 Aligned_cols=91 Identities=8% Similarity=0.072 Sum_probs=61.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
+.|-+|..+-.....|++ ...+..||++.+- .-..++.....--+.++|+.- +|+ ..+|.+|+.+.++.++..
T Consensus 60 ~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~~d~~ 134 (279)
T 3ccf_A 60 FILDLGCGTGQLTEKIAQ-SGAEVLGTDNAAT--MIEKARQNYPHLHFDVADARN-FRV-DKPLDAVFSNAMLHWVKEPE 134 (279)
T ss_dssp EEEEETCTTSHHHHHHHH-TTCEEEEEESCHH--HHHHHHHHCTTSCEEECCTTT-CCC-SSCEEEEEEESCGGGCSCHH
T ss_pred EEEEecCCCCHHHHHHHh-CCCeEEEEECCHH--HHHHHHhhCCCCEEEECChhh-CCc-CCCcCEEEEcchhhhCcCHH
Confidence 347888888777777776 6678888887531 111122211233466777754 666 679999999999999875
Q ss_pred CCchhhhhccc-CceEEEe
Q 038126 123 KTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 123 kTLPeLaRvsa-dglVif~ 140 (169)
+.|.++.|+-. +|.+++.
T Consensus 135 ~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 135 AAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEE
Confidence 77889999866 5666654
No 30
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.08 E-value=0.079 Score=39.12 Aligned_cols=92 Identities=21% Similarity=0.236 Sum_probs=63.4
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|.+|..+......|.+.. ..+..|||+.+ ++.+..+.+ ..|+ +..+|+. .+|+...+|.+|+.++.|
T Consensus 40 ~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 40 KVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTE---KNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp EEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH---HTTCCSEEEEECCGG-GCCSCTTCEEEEEEESCG
T ss_pred eEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH---HcCCCCcEEEEcccc-cCCCCCCCeeEEEEechh
Confidence 34888999988888777764 56888888753 222222222 2233 3445665 567778999999999999
Q ss_pred cccCC--CCchhhhhcc-cCceEEEe
Q 038126 118 DYLSP--KTLPELARVS-ADGVVIFA 140 (169)
Q Consensus 118 DyLsp--kTLPeLaRvs-adglVif~ 140 (169)
.++.. ..|.++.|+- .+|+++++
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 99976 6788888865 46676664
No 31
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=93.07 E-value=0.063 Score=38.04 Aligned_cols=91 Identities=16% Similarity=0.215 Sum_probs=61.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
.|.+|..+......|.+. ..+..|||+.+ +.-..++.... +--+..+|+. .+|+. .+|++|+..+.+.++..
T Consensus 49 vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~l~~~~~~~ 123 (220)
T 3hnr_A 49 VLEFGVGTGNLTNKLLLA-GRTVYGIEPSR--EMRMIAKEKLPKEFSITEGDFL-SFEVP-TSIDTIVSTYAFHHLTDDE 123 (220)
T ss_dssp EEEECCTTSHHHHHHHHT-TCEEEEECSCH--HHHHHHHHHSCTTCCEESCCSS-SCCCC-SCCSEEEEESCGGGSCHHH
T ss_pred EEEeCCCCCHHHHHHHhC-CCeEEEEeCCH--HHHHHHHHhCCCceEEEeCChh-hcCCC-CCeEEEEECcchhcCChHH
Confidence 388888888877777765 66888888753 12222222222 2234556663 24555 99999999999999987
Q ss_pred C--Cchhhhhcc-cCceEEEec
Q 038126 123 K--TLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 k--TLPeLaRvs-adglVif~G 141 (169)
+ .|-++.|+- .+|.++++-
T Consensus 124 ~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 124 KNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEe
Confidence 3 888998875 466777663
No 32
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=93.03 E-value=0.1 Score=38.31 Aligned_cols=95 Identities=9% Similarity=0.029 Sum_probs=60.7
Q ss_pred hccCCCchhhhhhhhccc--ccccccccccCC--------chhhHHHHHHHHhcce--eeee-e-cCcccccCCceeEEE
Q 038126 47 TGRDPETCSVVCKLLKEE--DNEAWGVEPFDS--------DDADANRMSLVRKGIV--QATD-I-KFPLAFRAKSFSLAI 112 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe--~tEAWGVEPyd~--------edad~~CksLVrKGiV--RvAD-I-kfpLPYR~KSFSlVi 112 (169)
|-||..+-.....|.+.- ..+.-||++.+- +.+..+.+..--..-| ...| + ...+|+...+|++|+
T Consensus 48 LDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~ 127 (275)
T 3bkx_A 48 LEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVV 127 (275)
T ss_dssp EEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEE
T ss_pred EEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEE
Confidence 777888877777777653 278999998763 3343333321100123 3444 3 356788889999999
Q ss_pred ecccccccCC-CCc-hhhhhccc-CceEEEec
Q 038126 113 VSDAVDYLSP-KTL-PELARVSA-DGVVIFAG 141 (169)
Q Consensus 113 VSDalDyLsp-kTL-PeLaRvsa-dglVif~G 141 (169)
..+.+.++.. ..+ -.+.++-. +|.+++.-
T Consensus 128 ~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 128 LAHSLWYFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EESCGGGSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred EccchhhCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999999876 223 33345555 78888864
No 33
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=93.01 E-value=0.044 Score=40.59 Aligned_cols=96 Identities=14% Similarity=0.068 Sum_probs=65.7
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|-+|..+-.....|.+....+..||++.+ ++-+..+++..- .+=-+..+|+ ..+|+...+|++|+....+.++
T Consensus 49 ~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~~~~~~ 127 (267)
T 3kkz_A 49 LIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEGAIYNI 127 (267)
T ss_dssp EEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESSCGGGT
T ss_pred EEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcCCceec
Confidence 4588888888888888887666899998754 222333333221 1122456777 4577778999999999999999
Q ss_pred CC-CCchhhhhccc-CceEEEec
Q 038126 121 SP-KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 121 sp-kTLPeLaRvsa-dglVif~G 141 (169)
.+ +.|-++.|+-. +|.+++..
T Consensus 128 ~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 128 GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCCEEEEEE
Confidence 65 66777777644 56666653
No 34
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=92.96 E-value=0.061 Score=38.15 Aligned_cols=102 Identities=20% Similarity=0.175 Sum_probs=61.6
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhc-ceeeeeecCcccccCCceeEEEecccccccCCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKG-IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSPK 123 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKG-iVRvADIkfpLPYR~KSFSlViVSDalDyLspk 123 (169)
|-+|..+......|.+....+..|+|..+ ++-+..+++..-..+ -+..+|+. ++-..+|++|+....++++ .+
T Consensus 65 LDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~---~~~~~~fD~i~~~~~~~~~-~~ 140 (205)
T 3grz_A 65 ADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLL---ADVDGKFDLIVANILAEIL-LD 140 (205)
T ss_dssp EEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTT---TTCCSCEEEEEEESCHHHH-HH
T ss_pred EEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccc---ccCCCCceEEEECCcHHHH-HH
Confidence 77888887776666655455788888643 233444433221111 23345552 2335899999988777665 35
Q ss_pred Cchhhhhc-ccCceEEEecCCcchhhhhhh
Q 038126 124 TLPELARV-SADGVVIFAGYPHQQRAKVSE 152 (169)
Q Consensus 124 TLPeLaRv-sadglVif~G~Pgqqrakvae 152 (169)
.+.++.|+ ..+|.+++++....+...+.+
T Consensus 141 ~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~ 170 (205)
T 3grz_A 141 LIPQLDSHLNEDGQVIFSGIDYLQLPKIEQ 170 (205)
T ss_dssp HGGGSGGGEEEEEEEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEEecCcccHHHHHH
Confidence 66777764 667888888755544444433
No 35
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=92.95 E-value=0.11 Score=37.52 Aligned_cols=51 Identities=14% Similarity=0.232 Sum_probs=37.3
Q ss_pred eeeeeecCcccccC---CceeEEEecccccccCC------CCchhhhhc-ccCceEEEecC
Q 038126 92 VQATDIKFPLAFRA---KSFSLAIVSDAVDYLSP------KTLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 92 VRvADIkfpLPYR~---KSFSlViVSDalDyLsp------kTLPeLaRv-sadglVif~G~ 142 (169)
+..+|+.-..|.-. .+|.+||.+.+|.++.+ +.|-++.|+ ...|.+|++..
T Consensus 139 ~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 139 VLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 55678776655555 89999999999998776 456666665 45778887763
No 36
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=92.91 E-value=0.055 Score=40.34 Aligned_cols=93 Identities=19% Similarity=0.110 Sum_probs=61.8
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--C
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP--K 123 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp--k 123 (169)
.|-+|-.|-.....|.+ ...+..||++.+. .-..++... +--+.++|+. .+|+...+|.+|+....+.++.. +
T Consensus 38 vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~--~~~~a~~~~-~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~~~~ 112 (261)
T 3ege_A 38 IADIGAGTGGYSVALAN-QGLFVYAVEPSIV--MRQQAVVHP-QVEWFTGYAE-NLALPDKSVDGVISILAIHHFSHLEK 112 (261)
T ss_dssp EEEETCTTSHHHHHHHT-TTCEEEEECSCHH--HHHSSCCCT-TEEEECCCTT-SCCSCTTCBSEEEEESCGGGCSSHHH
T ss_pred EEEEcCcccHHHHHHHh-CCCEEEEEeCCHH--HHHHHHhcc-CCEEEECchh-hCCCCCCCEeEEEEcchHhhccCHHH
Confidence 37778888776666665 6678899987651 111111111 2234456774 47888899999999999999965 7
Q ss_pred CchhhhhcccCc-eEEEecCC
Q 038126 124 TLPELARVSADG-VVIFAGYP 143 (169)
Q Consensus 124 TLPeLaRvsadg-lVif~G~P 143 (169)
.|-++.|+-.+| ++|+.-.|
T Consensus 113 ~l~~~~~~LkgG~~~~~~~~~ 133 (261)
T 3ege_A 113 SFQEMQRIIRDGTIVLLTFDI 133 (261)
T ss_dssp HHHHHHHHBCSSCEEEEEECG
T ss_pred HHHHHHHHhCCcEEEEEEcCC
Confidence 788888887777 44444343
No 37
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=92.86 E-value=0.063 Score=40.14 Aligned_cols=92 Identities=5% Similarity=-0.026 Sum_probs=57.1
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
|.+|-.+-.....|.+. ..+..||++.+ ++-+..+++..--+--+..+|+.- +|. ..+|++||.+..+.|+++
T Consensus 125 LD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~~~~~~~~ 201 (286)
T 3m70_A 125 LDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVFMFLNRER 201 (286)
T ss_dssp EEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSGGGSCGGG
T ss_pred EEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccchhhCCHHH
Confidence 77888887766666655 55888887643 222333332211022344566643 233 889999999999999987
Q ss_pred --CCchhhhhc-ccCceEEEec
Q 038126 123 --KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 123 --kTLPeLaRv-sadglVif~G 141 (169)
+.|.++.|+ ..+|++++..
T Consensus 202 ~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 202 VPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEE
Confidence 455566665 4567755544
No 38
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=92.78 E-value=0.028 Score=39.16 Aligned_cols=96 Identities=17% Similarity=0.115 Sum_probs=61.2
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccC-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS- 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLs- 121 (169)
+.|.+|..+-.+...|++....+..|+|+.+ ++-+..+.+.. .+--+..+|+.- +|+...+|.+||....++++.
T Consensus 45 ~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~~~ 122 (215)
T 2pxx_A 45 RILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRK-LDFPSASFDVVLEKGTLDALLA 122 (215)
T ss_dssp CEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTS-CCSCSSCEEEEEEESHHHHHTT
T ss_pred eEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhc-CCCCCCcccEEEECcchhhhcc
Confidence 3488888887777777766544788887542 22233332210 122345667643 477788999999999998886
Q ss_pred ----------------CCCchhhhhcc-cCceEEEecC
Q 038126 122 ----------------PKTLPELARVS-ADGVVIFAGY 142 (169)
Q Consensus 122 ----------------pkTLPeLaRvs-adglVif~G~ 142 (169)
.+.|-++.|+- .+|.+++..+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 123 GERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp TCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 25666777764 5677776653
No 39
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=92.68 E-value=0.09 Score=36.22 Aligned_cols=91 Identities=8% Similarity=0.131 Sum_probs=58.7
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCcccccCCceeEEEeccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfpLPYR~KSFSlViVSDalD 118 (169)
+.|.+|..+-.....|.+. ..+..|||+.+ ++.+..+.+ +.|+ +..+|+.- +|+ ..+|++|+.++.+.
T Consensus 35 ~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~ 108 (199)
T 2xvm_A 35 KTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKS---IENLDNLHTRVVDLNN-LTF-DRQYDFILSTVVLM 108 (199)
T ss_dssp EEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHH---HHTCTTEEEEECCGGG-CCC-CCCEEEEEEESCGG
T ss_pred eEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHH---hCCCCCcEEEEcchhh-CCC-CCCceEEEEcchhh
Confidence 4488888887777766665 56788887643 222333322 2232 34556543 556 88999999999999
Q ss_pred ccCC----CCchhhhhc-ccCceEEEec
Q 038126 119 YLSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 119 yLsp----kTLPeLaRv-sadglVif~G 141 (169)
++++ +.|-++.|+ ..+|.+++..
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9985 456666665 4567755543
No 40
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=92.65 E-value=0.023 Score=41.05 Aligned_cols=94 Identities=16% Similarity=0.120 Sum_probs=62.9
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh-c--ceeeeeecCcccccCCceeEEEecccccccC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK-G--IVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK-G--iVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
+.|.+|..+-.....|.+.-..+..||++.+ +.-..++..... . -+..+|+.- +|+...+|++|+..+++.+++
T Consensus 58 ~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~ 134 (266)
T 3ujc_A 58 KVLDIGSGLGGGCMYINEKYGAHTHGIDICS--NIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAILALS 134 (266)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCGGGSC
T ss_pred EEEEECCCCCHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHHHhcC
Confidence 3478888887777777765567888887643 122222222211 2 234566643 477789999999999999996
Q ss_pred C----CCchhhhhccc-CceEEEec
Q 038126 122 P----KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 122 p----kTLPeLaRvsa-dglVif~G 141 (169)
+ +.|.++.|+-. +|.++++.
T Consensus 135 ~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 135 LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4 77888888654 67777765
No 41
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=92.48 E-value=0.13 Score=36.21 Aligned_cols=94 Identities=14% Similarity=0.215 Sum_probs=63.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcc---------eeeeeecCcccccCCceeEEEec
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGI---------VQATDIKFPLAFRAKSFSLAIVS 114 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGi---------VRvADIkfpLPYR~KSFSlViVS 114 (169)
+.|.+|..+..+...|++. ..+..|+|+.+ ++-..++...+ .|+ +..+|+. .+|+...+|++|+.+
T Consensus 33 ~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 33 EILDIGCGSGKISLELASK-GYSVTGIDINS--EAIRLAETAARSPGLNQKTGGKAEFKVENAS-SLSFHDSSFDFAVMQ 108 (235)
T ss_dssp EEEEETCTTSHHHHHHHHT-TCEEEEEESCH--HHHHHHHHHTTCCSCCSSSSCEEEEEECCTT-SCCSCTTCEEEEEEE
T ss_pred eEEEECCCCCHHHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCccccCcceEEEEeccc-ccCCCCCceeEEEEc
Confidence 4588999998887777766 56788887642 22222333222 232 3455654 467778999999999
Q ss_pred ccccccCC-----CCchhhhhcc-cCceEEEecC
Q 038126 115 DAVDYLSP-----KTLPELARVS-ADGVVIFAGY 142 (169)
Q Consensus 115 DalDyLsp-----kTLPeLaRvs-adglVif~G~ 142 (169)
+.+.++.. +.|.++.|+- .+|.++++.+
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 99999975 5788888864 5677777653
No 42
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=92.35 E-value=0.14 Score=36.24 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=58.2
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh-c--ceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK-G--IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK-G--iVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
|-+|..+-.....|++. ..+..||++.+ ++-..++....+ + -+..+|+.-.. -..+|.+|+.++.+.|+..
T Consensus 56 LDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~~~~~~ 130 (216)
T 3ofk_A 56 LEIGCAAGAFTEKLAPH-CKRLTVIDVMP--RAIGRACQRTKRWSHISWAATDILQFS--TAELFDLIVVAEVLYYLEDM 130 (216)
T ss_dssp EEECCTTSHHHHHHGGG-EEEEEEEESCH--HHHHHHHHHTTTCSSEEEEECCTTTCC--CSCCEEEEEEESCGGGSSSH
T ss_pred EEEcCCCCHHHHHHHHc-CCEEEEEECCH--HHHHHHHHhcccCCCeEEEEcchhhCC--CCCCccEEEEccHHHhCCCH
Confidence 77788887777666655 46888888753 222233332222 2 24456664333 3689999999999999985
Q ss_pred ----CCchhhhhccc-CceEEEe
Q 038126 123 ----KTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 123 ----kTLPeLaRvsa-dglVif~ 140 (169)
+.|.++.|+-. +|+++|+
T Consensus 131 ~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 131 TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCEEEEE
Confidence 56888888755 5566664
No 43
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=92.26 E-value=0.088 Score=39.07 Aligned_cols=92 Identities=18% Similarity=0.085 Sum_probs=61.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
+.|-+|..+-.....|.+. ..+..|||+.+ +.-..++.... +.+..+|+. .+|+...+|++|+.++.+.++.+
T Consensus 57 ~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~l~~a~~~~~-~~~~~~d~~-~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 57 RVLDLGGGTGKWSLFLQER-GFEVVLVDPSK--EMLEVAREKGV-KNVVEAKAE-DLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp EEEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHHTC-SCEEECCTT-SCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred eEEEeCCCcCHHHHHHHHc-CCeEEEEeCCH--HHHHHHHhhcC-CCEEECcHH-HCCCCCCCEEEEEEcchhhhccccH
Confidence 3478888888777766665 56788888653 12222332222 347777875 36777889999999887776644
Q ss_pred -CCchhhhhccc-CceEEEec
Q 038126 123 -KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 -kTLPeLaRvsa-dglVif~G 141 (169)
+.|-++.|+-. +|.++++-
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEe
Confidence 66777887655 66766654
No 44
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=91.74 E-value=0.15 Score=38.12 Aligned_cols=93 Identities=14% Similarity=0.092 Sum_probs=62.7
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc-----eeeeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI-----VQATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi-----VRvADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|.+|-.+-.....|++.-..+..||++.+ ++-+..+++ ..|+ +..+|+. .+|+...+|.+|+..+++
T Consensus 85 ~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 85 KGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNN---QAGLADNITVKYGSFL-EIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp EEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH---HHTCTTTEEEEECCTT-SCSSCTTCEEEEEEESCG
T ss_pred EEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH---hcCCCcceEEEEcCcc-cCCCCCCCEeEEEecchh
Confidence 3467777777777777765455788887653 222333322 2232 3456653 478888999999999999
Q ss_pred cccCC--CCchhhhhcc-cCceEEEec
Q 038126 118 DYLSP--KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 118 DyLsp--kTLPeLaRvs-adglVif~G 141 (169)
.++.. +.|-++.|+- .+|.++++.
T Consensus 161 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 161 LHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 99986 7788888875 467777664
No 45
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=91.51 E-value=0.23 Score=36.38 Aligned_cols=91 Identities=22% Similarity=0.230 Sum_probs=60.9
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhc----ceeeeeecCcccccCCceeEEEecccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKG----IVQATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKG----iVRvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
.|.+|..+......|.+. ..+..||++.+ ++.+..+.+ +.| -+..+|+. .+|+...+|++|+.++++.+
T Consensus 25 vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~---~~~~~~v~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 99 (239)
T 1xxl_A 25 VLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQ---EKGVENVRFQQGTAE-SLPFPDDSFDIITCRYAAHH 99 (239)
T ss_dssp EEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHH---HHTCCSEEEEECBTT-BCCSCTTCEEEEEEESCGGG
T ss_pred EEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHH---HcCCCCeEEEecccc-cCCCCCCcEEEEEECCchhh
Confidence 477888886665555544 35788887653 222222222 223 23556763 47888899999999999999
Q ss_pred cCC--CCchhhhhcc-cCceEEEec
Q 038126 120 LSP--KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 120 Lsp--kTLPeLaRvs-adglVif~G 141 (169)
+.. +.|.++.|+- .+|.++++.
T Consensus 100 ~~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 100 FSDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 975 7788888875 467777764
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=91.48 E-value=0.12 Score=37.43 Aligned_cols=93 Identities=11% Similarity=0.086 Sum_probs=58.6
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEecccccccC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
.|-+|-.+-.+...|.+.-..+.-||++.+ ++.+..+.+..- .+=-+..+|+. .+|+ ..+|++|+..+++.++.
T Consensus 40 VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~~~~~~~~ 117 (256)
T 1nkv_A 40 ILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACVGATWIAG 117 (256)
T ss_dssp EEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEESCGGGTS
T ss_pred EEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEECCChHhcC
Confidence 367777776666666655455778887643 233333332210 01123556764 3566 88999999999999985
Q ss_pred C--CCchhhhhccc-CceEEEe
Q 038126 122 P--KTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 122 p--kTLPeLaRvsa-dglVif~ 140 (169)
. +.|.++.|+-. +|.++++
T Consensus 118 ~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 118 GFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp SSHHHHHHHTTSEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEe
Confidence 4 77889998765 5566554
No 47
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=91.43 E-value=0.67 Score=33.69 Aligned_cols=88 Identities=10% Similarity=0.019 Sum_probs=57.7
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCccccc-CCceeEEEecccccccCC-C
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFR-AKSFSLAIVSDAVDYLSP-K 123 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR-~KSFSlViVSDalDyLsp-k 123 (169)
.|-+|..+-.....|.+. ..+..||++.+ +.-..++....+--+..+|+.-++|+. ..+|.+|+.++ .+ +
T Consensus 52 vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-----~~~~ 123 (226)
T 3m33_A 52 VLEAGCGHGPDAARFGPQ-AARWAAYDFSP--ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR-----GPTS 123 (226)
T ss_dssp EEEESCTTSHHHHHHGGG-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES-----CCSG
T ss_pred EEEeCCCCCHHHHHHHHc-CCEEEEEECCH--HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC-----CHHH
Confidence 377888887776666665 66888888753 122222222223345678886678988 88999998872 33 7
Q ss_pred Cchhhhhcc-cCceEEEec
Q 038126 124 TLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 124 TLPeLaRvs-adglVif~G 141 (169)
.|.++.|+- .+|.++..+
T Consensus 124 ~l~~~~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 124 VILRLPELAAPDAHFLYVG 142 (226)
T ss_dssp GGGGHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEeC
Confidence 788888765 456666444
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=91.00 E-value=0.093 Score=39.71 Aligned_cols=95 Identities=11% Similarity=0.042 Sum_probs=61.6
Q ss_pred hhhhccCCCchhhhhhhhccc--ccccccccccCC--chhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccc
Q 038126 44 RVRTGRDPETCSVVCKLLKEE--DNEAWGVEPFDS--DDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 44 ~~aLHvGPdTC~VVskLLkEe--~tEAWGVEPyd~--edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
.+.|.+|..|-.....|.+.- ..+..||++.+. +-+..+.+..-.+=-+.++|+. .+|+ ..+|++|+....+.+
T Consensus 24 ~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~v~~~~~l~~ 101 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIEL-NDKYDIAICHAFLLH 101 (284)
T ss_dssp CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCCC-SSCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcCc-CCCeeEEEECChhhc
Confidence 345888999888877777652 467888876432 2222222211111234567776 4666 579999999999999
Q ss_pred cCC--CCchhhhhccc-CceEEEe
Q 038126 120 LSP--KTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 120 Lsp--kTLPeLaRvsa-dglVif~ 140 (169)
+.. +.|-++.|+-. +|.+++.
T Consensus 102 ~~~~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 102 MTTPETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp CSSHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEE
Confidence 975 77788887654 5565544
No 49
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=90.62 E-value=0.26 Score=36.10 Aligned_cols=94 Identities=19% Similarity=0.209 Sum_probs=60.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|.+|-.+-.....|.+.-..+..||++.+ ++-+..+++..- .+--+..+|+. .+|+...+|.+|+..+++.++..
T Consensus 66 LDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~ 144 (273)
T 3bus_A 66 LDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DLPFEDASFDAVWALESLHHMPD 144 (273)
T ss_dssp EEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCSCTTCEEEEEEESCTTTSSC
T ss_pred EEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cCCCCCCCccEEEEechhhhCCC
Confidence 77787777776777665567888887643 222333322210 01123455653 46777889999999999999965
Q ss_pred --CCchhhhhccc-CceEEEec
Q 038126 123 --KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 --kTLPeLaRvsa-dglVif~G 141 (169)
+.|-++.|+-. +|.++++.
T Consensus 145 ~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 145 RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEE
Confidence 67888888754 56666554
No 50
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=90.37 E-value=0.13 Score=33.85 Aligned_cols=94 Identities=7% Similarity=0.004 Sum_probs=58.7
Q ss_pred hhhccCCCchhhhhhhhcc--cccccccccccCCchhhHHHHHHHHhcceeeeeecCc-----cc--ccCCceeEEEecc
Q 038126 45 VRTGRDPETCSVVCKLLKE--EDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFP-----LA--FRAKSFSLAIVSD 115 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkE--e~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfp-----LP--YR~KSFSlViVSD 115 (169)
+.|.+|..+......|++. .+.+..|+|+.++.+. .+--+...|+.-. +| +...+|++|+...
T Consensus 25 ~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 25 TVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPI--------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp EEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCCC--------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECC
T ss_pred eEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccccc--------CcEEEEEcccccchhhhhhhccCCCCceeEEEECC
Confidence 3477788887777767665 2478899988774433 1222344565422 11 5668999999877
Q ss_pred cccccCC-------------CCchhhhhc-ccCceEEEecCCcch
Q 038126 116 AVDYLSP-------------KTLPELARV-SADGVVIFAGYPHQQ 146 (169)
Q Consensus 116 alDyLsp-------------kTLPeLaRv-sadglVif~G~Pgqq 146 (169)
.+.+... +.|.++.|+ ..+|.++++.+..++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 97 APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 6665532 445566554 567888887765544
No 51
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=90.26 E-value=0.082 Score=38.50 Aligned_cols=91 Identities=15% Similarity=0.017 Sum_probs=58.4
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcc-cccCCceeEEEecccccccCC-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPL-AFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpL-PYR~KSFSlViVSDalDyLsp- 122 (169)
+.|.+|-.+-.....|.+ ...+..||++.+ +.-..++.. --+..+|+.-.+ |+...+|++|+.++.+.++.+
T Consensus 44 ~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~--~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~ 117 (240)
T 3dli_A 44 RVLDIGCGRGEFLELCKE-EGIESIGVDINE--DMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPE 117 (240)
T ss_dssp CEEEETCTTTHHHHHHHH-HTCCEEEECSCH--HHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGG
T ss_pred eEEEEeCCCCHHHHHHHh-CCCcEEEEECCH--HHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcH
Confidence 348888888887665555 466788887742 222222222 112334443322 777899999999999999985
Q ss_pred ---CCchhhhhccc-CceEEEec
Q 038126 123 ---KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 ---kTLPeLaRvsa-dglVif~G 141 (169)
+.|-++.|+-. +|.+++.-
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEe
Confidence 56677777655 56666654
No 52
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=90.12 E-value=0.12 Score=39.68 Aligned_cols=95 Identities=9% Similarity=0.034 Sum_probs=62.4
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHH--hcceeeeeecCcccccCCceeEEEecccccccC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVR--KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVr--KGiVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
.|-+|..+-.....|.+.-..+..|||+.+ ++.+..+.+..-- +--+..+|+. .+|+...+|++|+..+.+.++.
T Consensus 121 vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~~~~l~~~~ 199 (312)
T 3vc1_A 121 LVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWNNESTMYVD 199 (312)
T ss_dssp EEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEEESCGGGSC
T ss_pred EEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEECCchhhCC
Confidence 367777776666666655356788888643 3334444433211 1124556764 5778889999999999999996
Q ss_pred C-CCchhhhhcc-cCceEEEec
Q 038126 122 P-KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 122 p-kTLPeLaRvs-adglVif~G 141 (169)
+ +.|.++.|+- .+|.++++.
T Consensus 200 ~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 200 LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEE
Confidence 4 6777787764 567777665
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=89.97 E-value=0.14 Score=36.10 Aligned_cols=94 Identities=20% Similarity=0.155 Sum_probs=56.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
.|.+|..+-.....|.+. ..+..|||+.+ ++.+..+.+..-.+--+..+|+. .+|+...+|.+|+..+.+.+...
T Consensus 42 vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~~D~v~~~~~~~~~~~~ 119 (227)
T 1ve3_A 42 VLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KLSFEDKTFDYVIFIDSIVHFEPL 119 (227)
T ss_dssp EEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SCCSCTTCEEEEEEESCGGGCCHH
T ss_pred EEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchh-cCCCCCCcEEEEEEcCchHhCCHH
Confidence 377787776665555544 44788887642 22233333222111234556654 35666789999999999666654
Q ss_pred ---CCchhhhhcc-cCceEEEec
Q 038126 123 ---KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 123 ---kTLPeLaRvs-adglVif~G 141 (169)
+.|.++.|+- .+|.+++.-
T Consensus 120 ~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 120 ELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEe
Confidence 5666766654 456666653
No 54
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.67 E-value=0.23 Score=37.00 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=58.2
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hc-----ceeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KG-----IVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KG-----iVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|.+|-.+-.....|.+.-..+..||++.+ +.-..++...+ .| -+..+|+ ..+| .+|++|+..+++.++
T Consensus 69 LDiGcG~G~~~~~l~~~~~~~v~gvd~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~---~~fD~v~~~~~l~~~ 142 (287)
T 1kpg_A 69 LDVGCGWGATMMRAVEKYDVNVVGLTLSK--NQANHVQQLVANSENLRSKRVLLAGW-EQFD---EPVDRIVSIGAFEHF 142 (287)
T ss_dssp EEETCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHTCCCCSCEEEEESCG-GGCC---CCCSEEEEESCGGGT
T ss_pred EEECCcccHHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHhcCCCCCeEEEECCh-hhCC---CCeeEEEEeCchhhc
Confidence 77888887777777755556788887642 22222333222 22 2445676 3566 899999999999999
Q ss_pred CC----CCchhhhhcc-cCceEEEec
Q 038126 121 SP----KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRvs-adglVif~G 141 (169)
.+ +.|-++.|+- .+|.+++.-
T Consensus 143 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 143 GHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 65 5567777764 567776654
No 55
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=89.29 E-value=0.27 Score=34.80 Aligned_cols=93 Identities=19% Similarity=0.218 Sum_probs=56.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecc-cccccC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSD-AVDYLS 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSD-alDyLs 121 (169)
+.|.+|..+......|++. ..+..||++.+ ++-+..+++..-.+--+..+|+. .+|+. .+|.+||.+. +|.|+.
T Consensus 40 ~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~-~~fD~v~~~~~~l~~~~ 116 (246)
T 1y8c_A 40 DYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLNIN-RKFDLITCCLDSTNYII 116 (246)
T ss_dssp EEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCCCS-CCEEEEEECTTGGGGCC
T ss_pred eEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCCcc-CCceEEEEcCccccccC
Confidence 4588888888877777665 45677887643 12222222211001223445653 23443 7899999996 999994
Q ss_pred C-----CCchhhhhcc-cCceEEEe
Q 038126 122 P-----KTLPELARVS-ADGVVIFA 140 (169)
Q Consensus 122 p-----kTLPeLaRvs-adglVif~ 140 (169)
. +.|-++.|+- .+|++++.
T Consensus 117 ~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 117 DSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 5667777764 46777764
No 56
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=89.15 E-value=0.44 Score=34.36 Aligned_cols=93 Identities=12% Similarity=0.033 Sum_probs=59.4
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
+.|.+|-.+-.....|.+.- ..+..|+++.+- .-..++....+--+..+|+.- +| -..+|++|+.+.++.++..
T Consensus 36 ~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~--~~~~a~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~~~~ 111 (259)
T 2p35_A 36 NGYDLGCGPGNSTELLTDRYGVNVITGIDSDDD--MLEKAADRLPNTNFGKADLAT-WK-PAQKADLLYANAVFQWVPDH 111 (259)
T ss_dssp SEEEETCTTTHHHHHHHHHHCTTSEEEEESCHH--HHHHHHHHSTTSEEEECCTTT-CC-CSSCEEEEEEESCGGGSTTH
T ss_pred EEEEecCcCCHHHHHHHHhCCCCEEEEEECCHH--HHHHHHHhCCCcEEEECChhh-cC-ccCCcCEEEEeCchhhCCCH
Confidence 44788888777666665542 567888876531 112222222222356677643 45 5789999999999999954
Q ss_pred -CCchhhhhccc-CceEEEec
Q 038126 123 -KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 -kTLPeLaRvsa-dglVif~G 141 (169)
+.|.++.|+-. +|.++++-
T Consensus 112 ~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 112 LAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp HHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEe
Confidence 77888888755 55666553
No 57
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=88.57 E-value=0.54 Score=33.78 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=55.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--C
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP--K 123 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp--k 123 (169)
.|.+|..+-.....|++. .|+++.+ ..-..++.. .--+..+|+. .+|+...+|++|+..+.|.++.. +
T Consensus 51 vLDiG~G~G~~~~~l~~~-----~~vD~s~--~~~~~a~~~--~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (219)
T 1vlm_A 51 GVEIGVGTGRFAVPLKIK-----IGVEPSE--RMAEIARKR--GVFVLKGTAE-NLPLKDESFDFALMVTTICFVDDPER 120 (219)
T ss_dssp EEEETCTTSTTHHHHTCC-----EEEESCH--HHHHHHHHT--TCEEEECBTT-BCCSCTTCEEEEEEESCGGGSSCHHH
T ss_pred EEEeCCCCCHHHHHHHHH-----hccCCCH--HHHHHHHhc--CCEEEEcccc-cCCCCCCCeeEEEEcchHhhccCHHH
Confidence 377788777776666654 6776542 111222221 1223455653 46777889999999999999964 6
Q ss_pred Cchhhhhccc-CceEEEec
Q 038126 124 TLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 124 TLPeLaRvsa-dglVif~G 141 (169)
.|-++.|+-. +|.++++-
T Consensus 121 ~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEE
Confidence 7778887654 56666664
No 58
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=88.47 E-value=0.67 Score=34.08 Aligned_cols=87 Identities=20% Similarity=0.098 Sum_probs=54.0
Q ss_pred hccCCCchhhhhhhhcc-cccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCCCCc
Q 038126 47 TGRDPETCSVVCKLLKE-EDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSPKTL 125 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE-e~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLspkTL 125 (169)
|-+|..+-.....|++. ...+..||++.+ +.-..++....+--+..+|+. .+|+...+|++|+..+. +..+
T Consensus 90 LdiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~-----~~~l 161 (269)
T 1p91_A 90 LDIGCGEGYYTHAFADALPEITTFGLDVSK--VAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYA-----PCKA 161 (269)
T ss_dssp EEETCTTSTTHHHHHHTCTTSEEEEEESCH--HHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESC-----CCCH
T ss_pred EEECCCCCHHHHHHHHhCCCCeEEEEeCCH--HHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCC-----hhhH
Confidence 66777775555555554 256788888753 122222222222235566764 46777889999997654 6778
Q ss_pred hhhhhccc-CceEEEec
Q 038126 126 PELARVSA-DGVVIFAG 141 (169)
Q Consensus 126 PeLaRvsa-dglVif~G 141 (169)
.++.|+-. +|.+++..
T Consensus 162 ~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 162 EELARVVKPGGWVITAT 178 (269)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEE
Confidence 89998765 56666553
No 59
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=88.32 E-value=0.36 Score=33.67 Aligned_cols=89 Identities=11% Similarity=-0.002 Sum_probs=58.8
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhc----ceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKG----IVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKG----iVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|.+|..+-.+...|.+. ..+..||++.+ +.-..++. +| -+..+|+.-. +...+|++|+.+.+|.++
T Consensus 49 ~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~--~~~~~a~~---~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGL-ADRVTALDGSA--EMIAEAGR---HGLDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp EEEEESCTTSHHHHHHHHH-SSEEEEEESCH--HHHHHHGG---GCCTTEEEEECCTTSC--CCSSCEEEEEEESCGGGS
T ss_pred eEEEECCCCCHHHHHHHhc-CCeEEEEeCCH--HHHHHHHh---cCCCCeEEEecccccC--CCCCceeEEEEechhhcC
Confidence 3488888887766666655 66888887643 12222222 34 2345566433 567899999999999999
Q ss_pred CC----CCchhhhhccc-CceEEEec
Q 038126 121 SP----KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRvsa-dglVif~G 141 (169)
.+ +.|-++.|+-. +|.++++.
T Consensus 121 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 121 PDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 86 55677777654 56776664
No 60
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=87.59 E-value=0.53 Score=36.20 Aligned_cols=98 Identities=9% Similarity=0.076 Sum_probs=53.0
Q ss_pred hhccCCCchhhhhhhhcccccccccccc-cC--CchhhHHH-----HHHHH----hcceeeeeecC-----ccc-c-cCC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEP-FD--SDDADANR-----MSLVR----KGIVQATDIKF-----PLA-F-RAK 106 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEP-yd--~edad~~C-----ksLVr----KGiVRvADIkf-----pLP-Y-R~K 106 (169)
.|.+|-.|..+--.|.+....+..||+. .+ ++.+..|+ +..-- ++-|++..... .++ + ...
T Consensus 83 vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 162 (281)
T 3bzb_A 83 VCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQ 162 (281)
T ss_dssp EEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCS
T ss_pred EEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCC
Confidence 3677777665544555544447888876 21 33355555 21100 01244321111 111 1 357
Q ss_pred ceeEEEecccccccCC--CCchhhhhccc------CceEEEecCC
Q 038126 107 SFSLAIVSDAVDYLSP--KTLPELARVSA------DGVVIFAGYP 143 (169)
Q Consensus 107 SFSlViVSDalDyLsp--kTLPeLaRvsa------dglVif~G~P 143 (169)
+|.+||.+|.+-+... +-+.++.|+-. +|+++++-.|
T Consensus 163 ~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 163 RFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp SBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred CCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 8999999999977543 66777777654 8865554433
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=87.46 E-value=0.58 Score=34.30 Aligned_cols=91 Identities=18% Similarity=0.122 Sum_probs=60.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecc-cccccCC-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSD-AVDYLSP- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSD-alDyLsp- 122 (169)
+.|.+|-.+-.....|++. ..+..||++.+ ++-..++....+--+..+|+.- +|. ..+|.+|+.+. .+.|+..
T Consensus 53 ~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 53 SLLDVACGTGMHLRHLADS-FGTVEGLELSA--DMLAIARRRNPDAVLHHGDMRD-FSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp EEEEETCTTSHHHHHHTTT-SSEEEEEESCH--HHHHHHHHHCTTSEEEECCTTT-CCC-SCCEEEEEECTTGGGGSCHH
T ss_pred cEEEeCCcCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHhhCCCCEEEECChHH-CCc-cCCcCEEEEcCchhhhcCCH
Confidence 3488888888877777765 45778887642 2333333333333355567643 455 78999999997 9999953
Q ss_pred ----CCchhhhhcc-cCceEEEe
Q 038126 123 ----KTLPELARVS-ADGVVIFA 140 (169)
Q Consensus 123 ----kTLPeLaRvs-adglVif~ 140 (169)
+.|-++.|+- .+|.+++.
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEE
Confidence 5677888864 56777775
No 62
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=87.16 E-value=0.26 Score=33.34 Aligned_cols=99 Identities=10% Similarity=-0.072 Sum_probs=58.0
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHh---cceeeeeecCcccccCCceeEEEecccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRK---GIVQATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrK---GiVRvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
+.|.+|..+-.....|++. ..+..|+|+.+ ++.+..+++..--. --+..+|+.-+++ ..+|.+|+....+.+
T Consensus 55 ~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~~ 131 (194)
T 1dus_A 55 DILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNPPIRA 131 (194)
T ss_dssp EEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECCCSTT
T ss_pred eEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECCCccc
Confidence 4488888888777777776 77888887543 23333333322111 1234456554444 778999998655432
Q ss_pred cC---CCCchhhhh-cccCceEEEecCCcch
Q 038126 120 LS---PKTLPELAR-VSADGVVIFAGYPHQQ 146 (169)
Q Consensus 120 Ls---pkTLPeLaR-vsadglVif~G~Pgqq 146 (169)
-. .+.+-++.| +..+|.+++.....+.
T Consensus 132 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 132 GKEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred chhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 10 144555555 4567888877655443
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=87.15 E-value=0.46 Score=35.88 Aligned_cols=90 Identities=12% Similarity=0.095 Sum_probs=58.8
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHH-Hhc-------ceeeeeecCcccccCCceeEEEec-cc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLV-RKG-------IVQATDIKFPLAFRAKSFSLAIVS-DA 116 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLV-rKG-------iVRvADIkfpLPYR~KSFSlViVS-Da 116 (169)
.|-+|-.+-.....|++. ..+..||++.+ ..-..++... +.| -+..+|+.- +|+ ..+|.+||.+ ..
T Consensus 86 vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 86 VLELAAGMGRLTFPFLDL-GWEVTALELST--SVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFGTVVISSGS 160 (299)
T ss_dssp EEEETCTTTTTHHHHHTT-TCCEEEEESCH--HHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEEEEEECHHH
T ss_pred EEEEeccCCHHHHHHHHc-CCeEEEEECCH--HHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcCEEEECCcc
Confidence 377888888877777766 56788887642 2222333222 222 256677753 565 7899999965 88
Q ss_pred ccccCC----CCchhhhhccc-CceEEEe
Q 038126 117 VDYLSP----KTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 117 lDyLsp----kTLPeLaRvsa-dglVif~ 140 (169)
+.|+++ +.|-++.|+-. +|.+++.
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 888885 77788888755 5665554
No 64
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=86.91 E-value=0.67 Score=35.19 Aligned_cols=89 Identities=10% Similarity=0.064 Sum_probs=55.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh-cc-----eeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK-GI-----VQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK-Gi-----VRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|.+|-.+-.....|.+.-..+..||++.+ +.-..++...++ |+ +..+|+ ..+| .+|++|+..+++.++
T Consensus 95 LDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~---~~fD~v~~~~~l~~~ 168 (318)
T 2fk8_A 95 LDIGCGWGTTMRRAVERFDVNVIGLTLSK--NQHARCEQVLASIDTNRSRQVLLQGW-EDFA---EPVDRIVSIEAFEHF 168 (318)
T ss_dssp EEESCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHTSCCSSCEEEEESCG-GGCC---CCCSEEEEESCGGGT
T ss_pred EEEcccchHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECCh-HHCC---CCcCEEEEeChHHhc
Confidence 77787776666666655355778887642 122223333322 32 334565 2344 789999999999999
Q ss_pred CC----CCchhhhhc-ccCceEEEec
Q 038126 121 SP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRv-sadglVif~G 141 (169)
.+ +.|-++.|+ ..+|.+++.-
T Consensus 169 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 169 GHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp CGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 64 566777775 4567777654
No 65
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=86.66 E-value=0.23 Score=33.53 Aligned_cols=108 Identities=13% Similarity=0.085 Sum_probs=59.9
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHH--hcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVR--KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVr--KGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|.+|..+-.....|++.. .+..|+|+.+ ++-+..+++..-- +--+...|+.-++|.- .+|++|+.+..+..+ .
T Consensus 38 ldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~~~~~~-~ 114 (192)
T 1l3i_A 38 VDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGGSGGEL-Q 114 (192)
T ss_dssp EEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESCCTTCH-H
T ss_pred EEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECCchHHH-H
Confidence 777887766666666555 7788887642 2333333332211 1113345654445432 489999988766543 3
Q ss_pred CCchhhhhc-ccCceEEEecCCcch-hhhhhhhhhcC
Q 038126 123 KTLPELARV-SADGVVIFAGYPHQQ-RAKVSELSKFG 157 (169)
Q Consensus 123 kTLPeLaRv-sadglVif~G~Pgqq-rakvaelskfg 157 (169)
..|.++.|+ ..+|.+++.....+. ..-...+.+.|
T Consensus 115 ~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 115 EILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLG 151 (192)
T ss_dssp HHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCC
Confidence 556666664 556787777654333 23333445555
No 66
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=86.59 E-value=0.63 Score=34.12 Aligned_cols=92 Identities=15% Similarity=0.087 Sum_probs=58.2
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hc-----ceeeeeecCcccc-cCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KG-----IVQATDIKFPLAF-RAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KG-----iVRvADIkfpLPY-R~KSFSlViVSDalDy 119 (169)
|.+|..+-.....|.+....+..||++.+ +.-..++.... .| -+..+|+. .+|+ ...+|++|+.++++.|
T Consensus 69 LDiGcG~G~~~~~l~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~~~l~~ 145 (298)
T 1ri5_A 69 LDLGCGKGGDLLKYERAGIGEYYGVDIAE--VSINDARVRARNMKRRFKVFFRAQDSY-GRHMDLGKEFDVISSQFSFHY 145 (298)
T ss_dssp EEETCTTTTTHHHHHHHTCSEEEEEESCH--HHHHHHHHHHHTSCCSSEEEEEESCTT-TSCCCCSSCEEEEEEESCGGG
T ss_pred EEECCCCCHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHhcCCCccEEEEECCcc-ccccCCCCCcCEEEECchhhh
Confidence 78888887777777766555888988653 22222333222 23 23455653 2355 5789999999999988
Q ss_pred c--CC----CCchhhhhccc-CceEEEec
Q 038126 120 L--SP----KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 120 L--sp----kTLPeLaRvsa-dglVif~G 141 (169)
+ +. +.|-++.|+-. +|.++++-
T Consensus 146 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 146 AFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 32 56777777654 56666654
No 67
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=86.45 E-value=0.66 Score=35.38 Aligned_cols=97 Identities=15% Similarity=0.052 Sum_probs=60.5
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHH--------hcceeeeeecCcc---ccc--CCcee
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVR--------KGIVQATDIKFPL---AFR--AKSFS 109 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVr--------KGiVRvADIkfpL---PYR--~KSFS 109 (169)
+.|.+|-.|......|++....+..|+++.+ ++.+..+....-. +--+..+|+.-.. |+. ..+|+
T Consensus 37 ~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD 116 (313)
T 3bgv_A 37 TVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFD 116 (313)
T ss_dssp EEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEE
T ss_pred EEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEE
Confidence 4478888888888888876566778887543 1222222222110 1134566765321 343 45999
Q ss_pred EEEeccccccc--CC----CCchhhhhc-ccCceEEEec
Q 038126 110 LAIVSDAVDYL--SP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 110 lViVSDalDyL--sp----kTLPeLaRv-sadglVif~G 141 (169)
+|+.+.+|.|+ ++ +.|-++.|+ ..+|++|++-
T Consensus 117 ~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 117 ICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp EEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 99999999998 32 667777775 4567777653
No 68
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=86.36 E-value=0.81 Score=32.75 Aligned_cols=90 Identities=10% Similarity=-0.029 Sum_probs=53.5
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcc--eeeeeecCcccccCCceeEEEecccccccCC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGI--VQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGi--VRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
.|.+|..+-.....|.+. ..+..|||+.+ +.-..++.... .|. +..+|+.-++| ...+|++||+...+.++.
T Consensus 74 vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~--~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~~- 148 (231)
T 1vbf_A 74 VLEIGTGIGYYTALIAEI-VDKVVSVEINE--KMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAPTLL- 148 (231)
T ss_dssp EEEECCTTSHHHHHHHHH-SSEEEEEESCH--HHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBSSCC-
T ss_pred EEEEcCCCCHHHHHHHHH-cCEEEEEeCCH--HHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHHHHH-
Confidence 377788876655555544 37788887642 22222222222 122 34456654444 457899999999998875
Q ss_pred CCchhhhhc-ccCceEEEecCC
Q 038126 123 KTLPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 123 kTLPeLaRv-sadglVif~G~P 143 (169)
.++.|+ ..+|.+++.-.+
T Consensus 149 ---~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 149 ---CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp ---HHHHHTEEEEEEEEEEECS
T ss_pred ---HHHHHHcCCCcEEEEEEcC
Confidence 456665 456776666433
No 69
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=85.97 E-value=0.35 Score=34.19 Aligned_cols=102 Identities=10% Similarity=0.004 Sum_probs=58.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
.|.+|-.+..+...|.+....+..|||..+ ++.+..+.+ .--+..+|+.- +| .+|.+||....+.++..
T Consensus 55 vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 55 VIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE-IS---GKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp EEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG-CC---CCEEEEEECCCC------
T ss_pred EEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH-CC---CCeeEEEECCCchhccCc
Confidence 377788887776666665444688888642 222333332 23355667643 44 68999998877777654
Q ss_pred ---CCchhhhhcccCceEEEecCCcchhhhhhhhhhcC
Q 038126 123 ---KTLPELARVSADGVVIFAGYPHQQRAKVSELSKFG 157 (169)
Q Consensus 123 ---kTLPeLaRvsadglVif~G~Pgqqrakvaelskfg 157 (169)
+.+-++.|+. |+++..-.|+....-.+.+.++|
T Consensus 127 ~~~~~l~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 127 SDRAFIDKAFETS--MWIYSIGNAKARDFLRREFSARG 162 (200)
T ss_dssp -CHHHHHHHHHHE--EEEEEEEEGGGHHHHHHHHHHHE
T ss_pred hhHHHHHHHHHhc--CcEEEEEcCchHHHHHHHHHHCC
Confidence 4677788887 55554445655433333344555
No 70
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=85.56 E-value=1 Score=31.74 Aligned_cols=86 Identities=13% Similarity=0.047 Sum_probs=52.5
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|..+-.....|.+. ..+..|||+.+ ++-+..+++. .|+ +..+|+.-.++ ...+|.+|+++..+.++
T Consensus 82 LdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~---~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~~~ 156 (210)
T 3lbf_A 82 LEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKN---LDLHNVSTRHGDGWQGWQ-ARAPFDAIIVTAAPPEI 156 (210)
T ss_dssp EEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHH---TTCCSEEEEESCGGGCCG-GGCCEEEEEESSBCSSC
T ss_pred EEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHH---cCCCceEEEECCcccCCc-cCCCccEEEEccchhhh
Confidence 67777776666666655 67888988753 2223333332 232 34456544333 36789999999988887
Q ss_pred CCCCchhhhhc-ccCceEEEec
Q 038126 121 SPKTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 spkTLPeLaRv-sadglVif~G 141 (169)
.+ ++.|+ ..+|.+++.=
T Consensus 157 ~~----~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 157 PT----ALMTQLDEGGILVLPV 174 (210)
T ss_dssp CT----HHHHTEEEEEEEEEEE
T ss_pred hH----HHHHhcccCcEEEEEE
Confidence 64 45554 4556655543
No 71
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=84.29 E-value=0.82 Score=32.37 Aligned_cols=81 Identities=15% Similarity=0.145 Sum_probs=53.4
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC-CC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-KT 124 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-kT 124 (169)
.|.+|..+-.+...| ..+..|+++.+- .--+..+|+.- +|+...+|++|+.+++|.+-.+ +.
T Consensus 71 vLDiG~G~G~~~~~l----~~~v~~~D~s~~------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~~~~~ 133 (215)
T 2zfu_A 71 VADFGCGDCRLASSI----RNPVHCFDLASL------------DPRVTVCDMAQ-VPLEDESVDVAVFCLSLMGTNIRDF 133 (215)
T ss_dssp EEEETCTTCHHHHHC----CSCEEEEESSCS------------STTEEESCTTS-CSCCTTCEEEEEEESCCCSSCHHHH
T ss_pred EEEECCcCCHHHHHh----hccEEEEeCCCC------------CceEEEecccc-CCCCCCCEeEEEEehhccccCHHHH
Confidence 377777776655544 256778777654 12345566643 6777889999999999964222 66
Q ss_pred chhhhhc-ccCceEEEecCC
Q 038126 125 LPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 125 LPeLaRv-sadglVif~G~P 143 (169)
|-++.|+ ..+|.++++-..
T Consensus 134 l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 134 LEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp HHHHHHHEEEEEEEEEEECG
T ss_pred HHHHHHhCCCCeEEEEEEcC
Confidence 7777776 456777776543
No 72
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=84.28 E-value=0.44 Score=36.95 Aligned_cols=91 Identities=10% Similarity=0.177 Sum_probs=56.7
Q ss_pred hccCCCchhhhhhhhc---ccccccccccccC--CchhhHHHHHHHHhcce--eeeeecCcccccCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLK---EEDNEAWGVEPFD--SDDADANRMSLVRKGIV--QATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLk---Ee~tEAWGVEPyd--~edad~~CksLVrKGiV--RvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
|-+|-.|=.....|++ ..+.+.-||++.+ ++-|..+++..-...-| ..+|+. .+|+ .+|++|+...+|.|
T Consensus 75 LDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~-~~~~--~~~d~v~~~~~l~~ 151 (261)
T 4gek_A 75 YDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR-DIAI--ENASMVVLNFTLQF 151 (261)
T ss_dssp EEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT-TCCC--CSEEEEEEESCGGG
T ss_pred EEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc-cccc--cccccceeeeeeee
Confidence 5666666555545544 3455778887654 34454444433222223 346763 4565 46999999999999
Q ss_pred cCC----CCchhhhhc-ccCceEEEe
Q 038126 120 LSP----KTLPELARV-SADGVVIFA 140 (169)
Q Consensus 120 Lsp----kTLPeLaRv-sadglVif~ 140 (169)
+.+ +.|.++.|+ ...|++|++
T Consensus 152 ~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 152 LEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 987 467888875 566777765
No 73
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=84.21 E-value=1.2 Score=31.57 Aligned_cols=92 Identities=17% Similarity=0.241 Sum_probs=58.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEE-ecccccccCC-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAI-VSDAVDYLSP- 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlVi-VSDalDyLsp- 122 (169)
+.|.+|..+......|.+... +..|+++.+ +.-..++....+--+..+|+. .+|. ..+|++|+ ..+++.|+..
T Consensus 43 ~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~~~~~~~~~ 117 (239)
T 3bxo_A 43 SLLDVACGTGTHLEHFTKEFG-DTAGLELSE--DMLTHARKRLPDATLHQGDMR-DFRL-GRKFSAVVSMFSSVGYLKTT 117 (239)
T ss_dssp EEEEETCTTSHHHHHHHHHHS-EEEEEESCH--HHHHHHHHHCTTCEEEECCTT-TCCC-SSCEEEEEECTTGGGGCCSH
T ss_pred eEEEecccCCHHHHHHHHhCC-cEEEEeCCH--HHHHHHHHhCCCCEEEECCHH-Hccc-CCCCcEEEEcCchHhhcCCH
Confidence 348888888888777776543 778877542 122222222222234556664 3455 78999999 5679999953
Q ss_pred ----CCchhhhhc-ccCceEEEec
Q 038126 123 ----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 123 ----kTLPeLaRv-sadglVif~G 141 (169)
+.|-++.|+ ..+|.+++.-
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 556667665 4577887763
No 74
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=83.92 E-value=0.65 Score=45.10 Aligned_cols=96 Identities=9% Similarity=0.063 Sum_probs=66.5
Q ss_pred hccCCCchhhhhhhhcccc--cccccccccC--CchhhHHHHHHHH---hcc----eeeeeecCcccccCCceeEEEecc
Q 038126 47 TGRDPETCSVVCKLLKEED--NEAWGVEPFD--SDDADANRMSLVR---KGI----VQATDIKFPLAFRAKSFSLAIVSD 115 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~--tEAWGVEPyd--~edad~~CksLVr---KGi----VRvADIkfpLPYR~KSFSlViVSD 115 (169)
|-+|-.+-.....|.+... .+..||++.+ ++-|..+.+.... .|+ +..+|+. .+|++..+|.+|+..+
T Consensus 726 LDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~-dLp~~d~sFDlVV~~e 804 (950)
T 3htx_A 726 VDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL-EFDSRLHDVDIGTCLE 804 (950)
T ss_dssp EEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT-SCCTTSCSCCEEEEES
T ss_pred EEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH-hCCcccCCeeEEEEeC
Confidence 7888888888887777653 6899998865 2223333332211 133 4456654 3788889999999999
Q ss_pred cccccCC----CCchhhhhcccCceEEEecCCc
Q 038126 116 AVDYLSP----KTLPELARVSADGVVIFAGYPH 144 (169)
Q Consensus 116 alDyLsp----kTLPeLaRvsadglVif~G~Pg 144 (169)
++.|+.+ +.+.++.|+-..| +++...|.
T Consensus 805 VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 805 VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred chhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 9999997 3567889999999 54444444
No 75
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=83.42 E-value=0.92 Score=31.49 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=55.6
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCc--ccccCCc-eeEEEecccccccCC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFP--LAFRAKS-FSLAIVSDAVDYLSP 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfp--LPYR~KS-FSlViVSDalDyLsp 122 (169)
.|.+|..+-.....|.+. ..+..||++.+ ..-..++.. ...-+...|+.-. .|+...+ |.+|+.+..+..-.+
T Consensus 56 vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~~~~ 131 (227)
T 3e8s_A 56 VLDLGCGEGWLLRALADR-GIEAVGVDGDR--TLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALLHQDI 131 (227)
T ss_dssp EEEETCTTCHHHHHHHTT-TCEEEEEESCH--HHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCSSCC
T ss_pred EEEeCCCCCHHHHHHHHC-CCEEEEEcCCH--HHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhhhhhH
Confidence 388888888777777766 56788887653 122222222 1122333343221 2444444 999999999983333
Q ss_pred -CCchhhhhccc-CceEEEec
Q 038126 123 -KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 -kTLPeLaRvsa-dglVif~G 141 (169)
+.|.++.|+-. +|.++++-
T Consensus 132 ~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 132 IELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp HHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEe
Confidence 77888887755 56666654
No 76
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=83.16 E-value=0.79 Score=34.02 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=58.9
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHH-----HHHhcceeeeeecCccc---ccCCceeEEEec-
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMS-----LVRKGIVQATDIKFPLA---FRAKSFSLAIVS- 114 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~Cks-----LVrKGiVRvADIkfpLP---YR~KSFSlViVS- 114 (169)
.|.+|..|-.....|++. ..+..||++.+ ++-+..+... -..+-.+..+|+ ..+| +-..+|.+|+..
T Consensus 61 vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~fD~V~~~g 138 (293)
T 3thr_A 61 VLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW-LTLDKDVPAGDGFDAVICLG 138 (293)
T ss_dssp EEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG-GGHHHHSCCTTCEEEEEECT
T ss_pred EEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh-hhCccccccCCCeEEEEEcC
Confidence 488899998887777766 45888887653 2223222211 011112344554 2455 667899999998
Q ss_pred ccccccCC---------CCchhhhhcc-cCceEEEe
Q 038126 115 DAVDYLSP---------KTLPELARVS-ADGVVIFA 140 (169)
Q Consensus 115 DalDyLsp---------kTLPeLaRvs-adglVif~ 140 (169)
+++.|+.. +.|-++.|+- .+|++++.
T Consensus 139 ~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 139 NSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp TCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99999986 5677788864 45666654
No 77
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=82.72 E-value=0.92 Score=31.35 Aligned_cols=95 Identities=9% Similarity=0.118 Sum_probs=51.8
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc--ee--eeeecCcccccCCceeEEEeccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI--VQ--ATDIKFPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi--VR--vADIkfpLPYR~KSFSlViVSDalD 118 (169)
+.|-+|-.|-.....|.+. ..+..|||..+ ++-+..+++. .|+ |+ ..|..--.++-..+|++|+.+ +.
T Consensus 25 ~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~---~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~--~~ 98 (185)
T 3mti_A 25 IVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSD---LGIENTELILDGHENLDHYVREPIRAAIFN--LG 98 (185)
T ss_dssp EEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH---HTCCCEEEEESCGGGGGGTCCSCEEEEEEE--EC
T ss_pred EEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHH---cCCCcEEEEeCcHHHHHhhccCCcCEEEEe--CC
Confidence 3477777776665566655 78888988653 3344444443 233 22 234332222447899999654 24
Q ss_pred ccCC-------------CCchhhhh-cccCceEEEecCCcc
Q 038126 119 YLSP-------------KTLPELAR-VSADGVVIFAGYPHQ 145 (169)
Q Consensus 119 yLsp-------------kTLPeLaR-vsadglVif~G~Pgq 145 (169)
|+.+ +.|.++.| +..+|.++++-|+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 4433 22355555 567888888877764
No 78
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=82.48 E-value=0.7 Score=35.84 Aligned_cols=93 Identities=14% Similarity=0.010 Sum_probs=58.2
Q ss_pred hhccCCCchhhhhhhhccc-cccccccc-ccCCchhhHHHHHHHH--hcceeeeeecCcccccCCceeEEEecccccccC
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVE-PFDSDDADANRMSLVR--KGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVE-Pyd~edad~~CksLVr--KGiVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
.|.||-.+-.....|++.- +.+..|++ |--++.+..+.+..-- +=-+...|+.-++|. .|.+|+.++.|.+++
T Consensus 187 vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~D~v~~~~vl~~~~ 263 (360)
T 1tw3_A 187 VLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR---KADAIILSFVLLNWP 263 (360)
T ss_dssp EEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS---CEEEEEEESCGGGSC
T ss_pred EEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC---CccEEEEcccccCCC
Confidence 3778888887777777654 44666776 4334444444332110 112345666546663 499999999998887
Q ss_pred C----CCchhhhhc-ccCceEEEec
Q 038126 122 P----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 122 p----kTLPeLaRv-sadglVif~G 141 (169)
. +.|-++.|+ ..+|.+++.-
T Consensus 264 ~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 264 DHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5 567777776 4567666654
No 79
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=82.35 E-value=1.6 Score=30.81 Aligned_cols=90 Identities=9% Similarity=0.001 Sum_probs=53.0
Q ss_pred hccCCCchhhhhhhhcccc--cccccccccCCchhhHHHHHHH-Hhcc----eeeeeecCcccccCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEED--NEAWGVEPFDSDDADANRMSLV-RKGI----VQATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~--tEAWGVEPyd~edad~~CksLV-rKGi----VRvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
|.+|..+-.....|++.-. .+..|+|+.+ +.-..++... +.|+ +..+|+..++| ...+|++||++..+.+
T Consensus 82 LdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~ 158 (215)
T 2yxe_A 82 LEIGTGCGYHAAVTAEIVGEDGLVVSIERIP--ELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTAAGPK 158 (215)
T ss_dssp EEECCTTSHHHHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESSBBSS
T ss_pred EEECCCccHHHHHHHHHhCCCCEEEEEeCCH--HHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECCchHH
Confidence 6777777666666665543 6788888653 2222222222 2222 34566654444 2568999999999987
Q ss_pred cCCCCchhhhhc-ccCceEEEecCC
Q 038126 120 LSPKTLPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 120 LspkTLPeLaRv-sadglVif~G~P 143 (169)
+. .++.|+ ..+|.+++.=.+
T Consensus 159 ~~----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 159 IP----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CC----HHHHHTEEEEEEEEEEESS
T ss_pred HH----HHHHHHcCCCcEEEEEECC
Confidence 65 466655 446666655433
No 80
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=82.07 E-value=0.77 Score=34.77 Aligned_cols=104 Identities=17% Similarity=0.208 Sum_probs=58.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc-ee--eeeecCcccccCCceeEEEecccccccC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI-VQ--ATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi-VR--vADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
|-+|-.+-.....+.+... +..|+++.+ ++.+..|.+ +.|+ ++ .+|+.-++ ...+|.+|+..-..+.+
T Consensus 125 LDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~---~~~~~v~~~~~d~~~~~--~~~~fD~Vv~n~~~~~~- 197 (254)
T 2nxc_A 125 LDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAK---RNGVRPRFLEGSLEAAL--PFGPFDLLVANLYAELH- 197 (254)
T ss_dssp EEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHH---HTTCCCEEEESCHHHHG--GGCCEEEEEEECCHHHH-
T ss_pred EEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHH---HcCCcEEEEECChhhcC--cCCCCCEEEECCcHHHH-
Confidence 6667776554444554433 788887543 333444433 2343 33 34544333 35689999875433332
Q ss_pred CCCchhhhhc-ccCceEEEecCCcchhhhhhh-hhhcC
Q 038126 122 PKTLPELARV-SADGVVIFAGYPHQQRAKVSE-LSKFG 157 (169)
Q Consensus 122 pkTLPeLaRv-sadglVif~G~Pgqqrakvae-lskfg 157 (169)
...++++.|+ ..+|.++++|....+...+.+ +.+.|
T Consensus 198 ~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~G 235 (254)
T 2nxc_A 198 AALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAG 235 (254)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCC
Confidence 3667777774 568899999855444444443 44444
No 81
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=81.86 E-value=0.74 Score=34.87 Aligned_cols=38 Identities=8% Similarity=0.174 Sum_probs=32.7
Q ss_pred ccCCceeEEEecccccccCC--CCchhhhhc-ccCceEEEe
Q 038126 103 FRAKSFSLAIVSDAVDYLSP--KTLPELARV-SADGVVIFA 140 (169)
Q Consensus 103 YR~KSFSlViVSDalDyLsp--kTLPeLaRv-sadglVif~ 140 (169)
+...+|.+|+.+.+|.|+.. ++|-++.|+ ..+|.++++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 56789999999999999975 899999998 667777765
No 82
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=81.74 E-value=0.9 Score=33.21 Aligned_cols=89 Identities=9% Similarity=0.035 Sum_probs=54.4
Q ss_pred hhccCCCchhhhhhhhcc-cccccccccccC--CchhhHHHHHHHHhcceeeeeecCc---ccccCCceeEEEecccccc
Q 038126 46 RTGRDPETCSVVCKLLKE-EDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFP---LAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkE-e~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfp---LPYR~KSFSlViVSDalDy 119 (169)
.|-+|-.|-.....|++. ...+..|||+.+ ++.+..+++.. ..=.+..+|+.-| +|+. .+|.+|+ . |.
T Consensus 78 VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~-~---~~ 151 (230)
T 1fbn_A 78 ILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY-E---DV 151 (230)
T ss_dssp EEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-E---CC
T ss_pred EEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-E---ec
Confidence 477788887766666665 346889998765 35555665544 1112335677654 3444 6899998 2 22
Q ss_pred cCC---CC-chhhhh-cccCceEEEe
Q 038126 120 LSP---KT-LPELAR-VSADGVVIFA 140 (169)
Q Consensus 120 Lsp---kT-LPeLaR-vsadglVif~ 140 (169)
-.| .. |.++.| +..+|.++++
T Consensus 152 ~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 152 AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 334 23 777774 5667887774
No 83
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=81.45 E-value=0.62 Score=33.45 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=62.7
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCccc--ccCCceeEEEeccc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFPLA--FRAKSFSLAIVSDA 116 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfpLP--YR~KSFSlViVSDa 116 (169)
.|-+|-.+-.+...|.+.- +.+..|||+.+ ++.+..+++. .|+ +..+|+.- +| +...+|++|++.-.
T Consensus 45 vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~---~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 45 HVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLE---VGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp EEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH---HCCSSEEEEECCSSC-GGGTSCTTCCSEEEEESC
T ss_pred EEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHH---cCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEECC
Confidence 4788888877777776654 56888988653 3334444432 333 33466653 55 66788999886532
Q ss_pred ccccC----------CCCchhhhh-cccCceEEEec-CCcchhhhhhhhhhcC
Q 038126 117 VDYLS----------PKTLPELAR-VSADGVVIFAG-YPHQQRAKVSELSKFG 157 (169)
Q Consensus 117 lDyLs----------pkTLPeLaR-vsadglVif~G-~Pgqqrakvaelskfg 157 (169)
..+.. +..|.++.| +..+|+++|.. .+.+...-.+.+.+.|
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC
Confidence 11111 124555666 56688888865 3344433344555555
No 84
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=81.16 E-value=1.4 Score=35.37 Aligned_cols=96 Identities=19% Similarity=0.093 Sum_probs=64.0
Q ss_pred hhccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHHHHh--c-----c--eeeeeecCc-----ccccCCc
Q 038126 46 RTGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSLVRK--G-----I--VQATDIKFP-----LAFRAKS 107 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksLVrK--G-----i--VRvADIkfp-----LPYR~KS 107 (169)
.|-+|..|-.....|++. ...+..||++.+ ++-+..+.+.+-.+ | - +..+|+.-. +|+...+
T Consensus 87 VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~ 166 (383)
T 4fsd_A 87 VLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSS 166 (383)
T ss_dssp EEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTC
T ss_pred EEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCC
Confidence 477888887776666665 456889998754 33344444433222 3 2 344666432 1777899
Q ss_pred eeEEEecccccccCC--CCchhhhhcc-cCceEEEec
Q 038126 108 FSLAIVSDAVDYLSP--KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 108 FSlViVSDalDyLsp--kTLPeLaRvs-adglVif~G 141 (169)
|.+|+....+.++.. +.|.++.|+- .+|.++++-
T Consensus 167 fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 167 VDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999999999999865 7788888864 467777754
No 85
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=81.00 E-value=4.4 Score=30.54 Aligned_cols=92 Identities=14% Similarity=0.078 Sum_probs=54.3
Q ss_pred hccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHH--HHhcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSL--VRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksL--VrKGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|-.+-.....|++. ...+..|+|+.+ ++.+..+.+.. ..+=-+..+|+.-+ +...+|++||. |. -
T Consensus 115 LD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~fD~Vi~-~~---~ 188 (275)
T 1yb2_A 115 LEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF--ISDQMYDAVIA-DI---P 188 (275)
T ss_dssp EEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC--CCSCCEEEEEE-CC---S
T ss_pred EEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc--CcCCCccEEEE-cC---c
Confidence 66677666666666654 256788887643 33344443322 00111334566544 44578999987 32 2
Q ss_pred CC-CCchhhhh-cccCceEEEecCCc
Q 038126 121 SP-KTLPELAR-VSADGVVIFAGYPH 144 (169)
Q Consensus 121 sp-kTLPeLaR-vsadglVif~G~Pg 144 (169)
.| +.|.++.| +..+|.+++...+.
T Consensus 189 ~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 189 DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 33 77888888 56778888877554
No 86
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=80.46 E-value=3.5 Score=32.76 Aligned_cols=89 Identities=10% Similarity=0.091 Sum_probs=55.1
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcc---ee--eeeec-CcccccCCceeEEEeccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGI---VQ--ATDIK-FPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGi---VR--vADIk-fpLPYR~KSFSlViVSDalD 118 (169)
.|-+|-.|-.+...+.+....+..|||+.+ .+ ..++..++ .|+ |+ ..|+. +++| .+|++||....+.
T Consensus 54 VLDiGcGtG~ls~~la~~g~~~V~~vD~s~--~~-~~a~~~~~~~~l~~~v~~~~~d~~~~~~~---~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 54 VLDVGCGSGILSFFAAQAGARKIYAVEAST--MA-QHAEVLVKSNNLTDRIVVIPGKVEEVSLP---EQVDIIISEPMGY 127 (348)
T ss_dssp EEEETCTTSHHHHHHHHTTCSEEEEEECST--HH-HHHHHHHHHTTCTTTEEEEESCTTTCCCS---SCEEEEEECCCBT
T ss_pred EEEcCCCccHHHHHHHhCCCCEEEEECCHH--HH-HHHHHHHHHcCCCCcEEEEEcchhhCCCC---CceeEEEEeCchh
Confidence 377888887777777776566899999975 33 33444443 343 33 34442 2444 5799998877777
Q ss_pred ccCCCCch----hhhh-cccCceEEEe
Q 038126 119 YLSPKTLP----ELAR-VSADGVVIFA 140 (169)
Q Consensus 119 yLspkTLP----eLaR-vsadglVif~ 140 (169)
++....++ ++.| +..+|++|+.
T Consensus 128 ~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred cCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 77654333 3334 4567777743
No 87
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=79.83 E-value=0.95 Score=35.16 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=57.6
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHH-Hhc---ce--eeeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLV-RKG---IV--QATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLV-rKG---iV--RvADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|.||-.+-.+...|++.- ..+..|++. .++-..++..+ +.| -| ...|+.-++|. .|.+|+.++.|
T Consensus 185 ~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~D~v~~~~vl 258 (374)
T 1qzz_A 185 HVLDVGGGNGGMLAAIALRAPHLRGTLVEL---AGPAERARRRFADAGLADRVTVAEGDFFKPLPV---TADVVLLSFVL 258 (374)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC---CEEEEEEESCG
T ss_pred EEEEECCCcCHHHHHHHHHCCCCEEEEEeC---HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC---CCCEEEEeccc
Confidence 34788888888877777664 456667663 23323333222 223 23 34565446664 39999999999
Q ss_pred cccCC----CCchhhhhc-ccCceEEEecC
Q 038126 118 DYLSP----KTLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 118 DyLsp----kTLPeLaRv-sadglVif~G~ 142 (169)
.+++. +.|-++.|+ ..+|.+++.-.
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 98876 567777776 45676665433
No 88
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=79.32 E-value=1.2 Score=30.72 Aligned_cols=49 Identities=22% Similarity=0.331 Sum_probs=37.3
Q ss_pred ceeeeeecCcccc---cCCceeEEEecccccccCC---CCchhhhhcc-cCceEEEe
Q 038126 91 IVQATDIKFPLAF---RAKSFSLAIVSDAVDYLSP---KTLPELARVS-ADGVVIFA 140 (169)
Q Consensus 91 iVRvADIkfpLPY---R~KSFSlViVSDalDyLsp---kTLPeLaRvs-adglVif~ 140 (169)
-+..+|+. .+|+ ...+|.+|+.+.+|.|+.+ +.|.++.|+- .+|.++|.
T Consensus 45 ~~~~~d~~-~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 45 RVSVENIK-QLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEEEEGG-GGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEechh-cCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 45677876 3455 7899999999999999933 7788888874 56777774
No 89
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=79.16 E-value=1.8 Score=30.49 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=57.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCCC-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSPK- 123 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLspk- 123 (169)
+.|-+|..|-.+...|.+.. +..|||..+-- ++. ..+--+..+|+.-++ ...+|.+|+..-.+-..+++
T Consensus 26 ~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~-----~~~-~~~~~~~~~d~~~~~--~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 26 IVLDLGTSTGVITEQLRKRN--TVVSTDLNIRA-----LES-HRGGNLVRADLLCSI--NQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp EEEEETCTTCHHHHHHTTTS--EEEEEESCHHH-----HHT-CSSSCEEECSTTTTB--CGGGCSEEEECCCCBTTCCCT
T ss_pred eEEEeccCccHHHHHHHhcC--cEEEEECCHHH-----Hhc-ccCCeEEECChhhhc--ccCCCCEEEECCCCccCCccc
Confidence 34788888887777777665 88888754211 000 222345667776544 45899999986544333222
Q ss_pred ----------CchhhhhcccCceEEEecCCcchhhhh
Q 038126 124 ----------TLPELARVSADGVVIFAGYPHQQRAKV 150 (169)
Q Consensus 124 ----------TLPeLaRvsadglVif~G~Pgqqrakv 150 (169)
.+.++.|...+|.+++...+..+...+
T Consensus 96 ~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~~~~~~~l 132 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAVTVGMLYLLVIEANRPKEV 132 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHCCSSEEEEEEEGGGCHHHH
T ss_pred cccCCcchHHHHHHHHhhCCCCEEEEEEecCCCHHHH
Confidence 345555555888888876443333333
No 90
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=78.94 E-value=0.14 Score=40.81 Aligned_cols=88 Identities=16% Similarity=0.158 Sum_probs=56.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeee-----eecCcccccCCceeEEEecccccccC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQAT-----DIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvA-----DIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
|-+|-.+-.....|.+ ...+..||+|.+ +.-..++ ++|+--.. |.-..||+...+|++|+..++|.|+.
T Consensus 112 LDiGcG~G~~~~~l~~-~g~~v~gvD~s~--~~~~~a~---~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~ 185 (416)
T 4e2x_A 112 VEIGCNDGIMLRTIQE-AGVRHLGFEPSS--GVAAKAR---EKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIP 185 (416)
T ss_dssp EEETCTTTTTHHHHHH-TTCEEEEECCCH--HHHHHHH---TTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCT
T ss_pred EEecCCCCHHHHHHHH-cCCcEEEECCCH--HHHHHHH---HcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcC
Confidence 6777777666655554 566889998853 2222222 22332111 22224567788999999999999996
Q ss_pred C--CCchhhhhccc-CceEEEe
Q 038126 122 P--KTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 122 p--kTLPeLaRvsa-dglVif~ 140 (169)
. ..|-++.|+-. +|++++.
T Consensus 186 d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 186 YVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp THHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEE
Confidence 5 78888888765 5566654
No 91
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=78.66 E-value=2.3 Score=30.91 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=60.5
Q ss_pred hccCCCchhhhhhhhcc-c-ccccccccccC--CchhhHHHHHHHHhc--ceeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKE-E-DNEAWGVEPFD--SDDADANRMSLVRKG--IVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE-e-~tEAWGVEPyd--~edad~~CksLVrKG--iVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|..+......|++. . ..+..|+|.-+ ++.+..+++..--.. -+..+|+.-+ +...+|++|+. |. -
T Consensus 98 ldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~-~~---~ 171 (255)
T 3mb5_A 98 VEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG--IEEENVDHVIL-DL---P 171 (255)
T ss_dssp EEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC--CCCCSEEEEEE-CS---S
T ss_pred EEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc--cCCCCcCEEEE-CC---C
Confidence 66677776666666655 2 67788887642 333444444321122 2344566544 45678999886 32 2
Q ss_pred CC-CCchhhhhc-ccCceEEEec-CCcchhhhhhhhhhcC
Q 038126 121 SP-KTLPELARV-SADGVVIFAG-YPHQQRAKVSELSKFG 157 (169)
Q Consensus 121 sp-kTLPeLaRv-sadglVif~G-~Pgqqrakvaelskfg 157 (169)
.| ..|.++.|+ ..+|.+++.. ...|...-...+.+.|
T Consensus 172 ~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 172 QPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp CGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred CHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 33 578888885 5567777665 3444444445555555
No 92
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=78.52 E-value=0.3 Score=32.75 Aligned_cols=111 Identities=16% Similarity=0.018 Sum_probs=61.3
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccC---CceeEEEeccccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRA---KSFSLAIVSDAVDYL 120 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~---KSFSlViVSDalDyL 120 (169)
.|.+|..+......|.+.... ..|||..+ ++-+..+.+..--+--+..+|+.-.+|.-. .+|.+|+......-.
T Consensus 45 vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~ 123 (171)
T 1ws6_A 45 FLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMD 123 (171)
T ss_dssp EEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTTSC
T ss_pred EEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCchh
Confidence 477888888777777765433 78887642 222333332210022344566654444322 389998876554312
Q ss_pred CCCCchhhh--h-cccCceEEEecCCcchhhhhhhhhhcCC
Q 038126 121 SPKTLPELA--R-VSADGVVIFAGYPHQQRAKVSELSKFGR 158 (169)
Q Consensus 121 spkTLPeLa--R-vsadglVif~G~Pgqqrakvaelskfgr 158 (169)
.+..+..+. | +..+|++++.-.+.+.-. .-+-.+||+
T Consensus 124 ~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~~-~~~~~~y~~ 163 (171)
T 1ws6_A 124 LAALFGELLASGLVEAGGLYVLQHPKDLYLP-LGERRVYGE 163 (171)
T ss_dssp TTHHHHHHHHHTCEEEEEEEEEEEETTSCCT-TSEEEEETT
T ss_pred HHHHHHHHHhhcccCCCcEEEEEeCCccCCc-hhhhhccCc
Confidence 235556665 4 567888888776655422 333344554
No 93
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=77.93 E-value=1.1 Score=32.69 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=50.4
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCcccccCC-ceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFPLAFRAK-SFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfpLPYR~K-SFSlViVSDalDy 119 (169)
|-+|-.+-.....|.+.-..+..|||+.+ ++.+..+.+ +.|+ +...|+..++| .. .|++||++..+.+
T Consensus 96 LdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~~~v~~~~~d~~~~~~--~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 96 LEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE---RAGVKNVHVILGDGSKGFP--PKAPYDVIIVTAGAPK 170 (235)
T ss_dssp EEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH---HTTCCSEEEEESCGGGCCG--GGCCEEEEEECSBBSS
T ss_pred EEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH---HcCCCCcEEEECCcccCCC--CCCCccEEEECCcHHH
Confidence 66666665655555554336788887643 233333333 2332 34567654544 34 4999999988877
Q ss_pred cCCCCchhhhhc-ccCceEEEec
Q 038126 120 LSPKTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 120 LspkTLPeLaRv-sadglVif~G 141 (169)
+. +++.|+ ..+|.+++.-
T Consensus 171 ~~----~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 171 IP----EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CC----HHHHHTEEEEEEEEEEE
T ss_pred HH----HHHHHhcCCCcEEEEEE
Confidence 64 466664 4566665543
No 94
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=76.48 E-value=3.8 Score=31.81 Aligned_cols=105 Identities=17% Similarity=0.089 Sum_probs=54.6
Q ss_pred hccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHHH------------HhcceeeeeecCcc-cccCCcee
Q 038126 47 TGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSLV------------RKGIVQATDIKFPL-AFRAKSFS 109 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksLV------------rKGiVRvADIkfpL-PYR~KSFS 109 (169)
|-+|-.+-.....|++. ...+..|+|..+ ++-+..|.+.+- .+=-+...|+.-.+ ++...+|+
T Consensus 110 LDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD 189 (336)
T 2b25_A 110 LEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFD 189 (336)
T ss_dssp EEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EE
T ss_pred EEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCee
Confidence 66666666665666654 237888988643 333444444321 11123456665433 55567899
Q ss_pred EEEecccccccCC-CCchhhhhccc-CceEEE-ecCCcchhhhhhhhhh
Q 038126 110 LAIVSDAVDYLSP-KTLPELARVSA-DGVVIF-AGYPHQQRAKVSELSK 155 (169)
Q Consensus 110 lViVSDalDyLsp-kTLPeLaRvsa-dglVif-~G~Pgqqrakvaelsk 155 (169)
+|+. |. ..| ..|+++.|+-. +|.+++ .....|...-...+.+
T Consensus 190 ~V~~-~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 190 AVAL-DM---LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp EEEE-CS---SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEE-CC---CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 9886 33 345 56888888755 455554 3444455444444443
No 95
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=76.39 E-value=2.2 Score=32.64 Aligned_cols=94 Identities=15% Similarity=0.110 Sum_probs=58.2
Q ss_pred hhhccCCCchhhhhhhhccc-cccccccccc-CCchhhHHHHHHHHhccee--eeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPF-DSDDADANRMSLVRKGIVQ--ATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPy-d~edad~~CksLVrKGiVR--vADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|.||..+-.....|++.- ..+..|+++- -++.+..+.+..--..-|+ ..|+.-|+| ++|.+|+.++.|.++
T Consensus 170 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 170 SFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVP---SNGDIYLLSRIIGDL 246 (334)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC---SSCSEEEEESCGGGC
T ss_pred EEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC---CCCCEEEEchhccCC
Confidence 45778888888877777653 4466777651 1233444433221112233 455544555 689999999999888
Q ss_pred CC----CCchhhhhc-ccCceEEEec
Q 038126 121 SP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRv-sadglVif~G 141 (169)
++ +.|-++.|+ ..+|.+++.-
T Consensus 247 ~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 247 DEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 76 456666665 5577777663
No 96
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=76.35 E-value=1.8 Score=31.32 Aligned_cols=99 Identities=12% Similarity=0.031 Sum_probs=59.8
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH-HhcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV-RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV-rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
.|-+|-.|-.+.-.+++....+..|||..+ ++-+..|.+..- .+--+..+|+.-.+|....+|.+|+..-. |-..
T Consensus 58 vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p--~~~~ 135 (202)
T 2fpo_A 58 CLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP--FRRG 135 (202)
T ss_dssp EEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS--SSTT
T ss_pred EEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC--CCCC
Confidence 366677776666666766556788887542 333444443221 01124556765556766779998876433 2222
Q ss_pred ---CCchhhhh---cccCceEEEecCCcch
Q 038126 123 ---KTLPELAR---VSADGVVIFAGYPHQQ 146 (169)
Q Consensus 123 ---kTLPeLaR---vsadglVif~G~Pgqq 146 (169)
+.+.++.+ +..+|++++.-.+.+.
T Consensus 136 ~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 136 LLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp THHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred cHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 45666766 7889999988766554
No 97
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=76.32 E-value=2 Score=31.77 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=51.7
Q ss_pred hccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHH----HHhcceeeeeecCcccccCCceeEEEeccccc
Q 038126 47 TGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSL----VRKGIVQATDIKFPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksL----VrKGiVRvADIkfpLPYR~KSFSlViVSDalD 118 (169)
|-+|-.+-.....|++. ...+..|+|..+ ++.+..+.+.. ...=-+...|+.- +|+...+|++|+. |
T Consensus 104 LdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~-~~~~~~~~D~v~~-~--- 178 (280)
T 1i9g_A 104 LEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD-SELPDGSVDRAVL-D--- 178 (280)
T ss_dssp EEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG-CCCCTTCEEEEEE-E---
T ss_pred EEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh-cCCCCCceeEEEE-C---
Confidence 66666666666666654 356788887532 23344444332 1111233456532 2455678999987 3
Q ss_pred ccCC-CCchhhhhc-ccCceEEEec
Q 038126 119 YLSP-KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 119 yLsp-kTLPeLaRv-sadglVif~G 141 (169)
...| ..|.++.|+ ..+|.+++..
T Consensus 179 ~~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 179 MLAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 3344 778888875 5566666654
No 98
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=76.22 E-value=0.32 Score=33.44 Aligned_cols=101 Identities=11% Similarity=-0.008 Sum_probs=59.9
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEecccccc-
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDY- 119 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDy- 119 (169)
+.|-+|-.+......|++....+..|||+.+ ++.+..+.+..- .+--+..+|+.-.+|.-..+|.+|+.......
T Consensus 34 ~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~~ 113 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAKE 113 (177)
T ss_dssp EEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHHH
T ss_pred eEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCcc
Confidence 3478888888887778777557889998643 333444443321 11234457776556665677999887533211
Q ss_pred cCCCCchhhh--h-cccCceEEEecCCcc
Q 038126 120 LSPKTLPELA--R-VSADGVVIFAGYPHQ 145 (169)
Q Consensus 120 LspkTLPeLa--R-vsadglVif~G~Pgq 145 (169)
..+..+..++ | +..+|++++.-.+.+
T Consensus 114 ~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 114 TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 1124445553 3 567888887664443
No 99
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=75.95 E-value=3.2 Score=31.10 Aligned_cols=49 Identities=14% Similarity=0.317 Sum_probs=36.3
Q ss_pred eeeeecCcccc-----cCCceeEEEecccccccCC------CCchhhhhcc-cCceEEEec
Q 038126 93 QATDIKFPLAF-----RAKSFSLAIVSDAVDYLSP------KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 93 RvADIkfpLPY-----R~KSFSlViVSDalDyLsp------kTLPeLaRvs-adglVif~G 141 (169)
..+|+.-++|+ ...+|.+|+.+.+|.++.+ +.|.++.|+- ..|.++|++
T Consensus 155 ~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 155 LPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp ECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 34588766664 3467999999999999765 5677888864 567888775
No 100
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=75.75 E-value=3.5 Score=28.66 Aligned_cols=91 Identities=16% Similarity=0.157 Sum_probs=55.0
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hc---ceeeeeecCcccccCCceeEEEeccccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KG---IVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KG---iVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
+.|.+|..+-.....|.+. ..+..|||+.+ .+-..++.... .| -+..+|+. .+|+...+|++|+.+ +-++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSS--VGLAKAKQLAQEKGVKITTVQSNLA-DFDIVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSH--HHHHHHHHHHHHHTCCEEEECCBTT-TBSCCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCH--HHHHHHHHHHHhcCCceEEEEcChh-hcCCCcCCccEEEEE--hhcC
Confidence 5688898887776666654 56788887642 22222333222 22 23445653 346667899999985 3355
Q ss_pred CC----CCchhhhhc-ccCceEEEec
Q 038126 121 SP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRv-sadglVif~G 141 (169)
.+ +.|-++.|+ ..+|.+++..
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 43 556677775 4567777775
No 101
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=74.70 E-value=0.94 Score=34.77 Aligned_cols=42 Identities=7% Similarity=0.309 Sum_probs=32.3
Q ss_pred cccCCceeEEEecccccccC-------C-CCchhhhhc-ccCceEEEecCC
Q 038126 102 AFRAKSFSLAIVSDAVDYLS-------P-KTLPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 102 PYR~KSFSlViVSDalDyLs-------p-kTLPeLaRv-sadglVif~G~P 143 (169)
|+...+|.+|+...++.|+. + +.+-++.|+ ..+|++|+.-+|
T Consensus 172 ~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 172 EAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP 222 (292)
T ss_dssp TTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 46778999999999998882 2 667777775 567888887554
No 102
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=74.14 E-value=0.78 Score=36.53 Aligned_cols=97 Identities=14% Similarity=0.098 Sum_probs=55.1
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhcc------eeeeeecCcccccCCceeEEEeccc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKGI------VQATDIKFPLAFRAKSFSLAIVSDA 116 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKGi------VRvADIkfpLPYR~KSFSlViVSDa 116 (169)
.|.+|-.+..+...|++.. ..+.-+||.-+ ++-+..+...+ ..|+ +..+|..--|+....+|.+||+ |+
T Consensus 99 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~-~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~-d~ 176 (304)
T 2o07_A 99 VLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGM-AIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT-DS 176 (304)
T ss_dssp EEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHH-HGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE-EC
T ss_pred EEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh-hcccCCCcEEEEECcHHHHHhhCCCCceEEEE-CC
Confidence 4888999999988888763 45677777532 12233332221 1232 4456754335555688999886 77
Q ss_pred ccccCC-------CCchhhhh-cccCceEEEec-CCc
Q 038126 117 VDYLSP-------KTLPELAR-VSADGVVIFAG-YPH 144 (169)
Q Consensus 117 lDyLsp-------kTLPeLaR-vsadglVif~G-~Pg 144 (169)
.+...| ..+.++.| +..+|++++.. .|-
T Consensus 177 ~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 177 SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp C-----------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcc
Confidence 665443 23455554 46778887754 443
No 103
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=74.11 E-value=1.5 Score=32.86 Aligned_cols=50 Identities=14% Similarity=0.103 Sum_probs=38.0
Q ss_pred eeeeeecCccccc---CCceeEEEecccccccCC------CCchhhhh-cccCceEEEec
Q 038126 92 VQATDIKFPLAFR---AKSFSLAIVSDAVDYLSP------KTLPELAR-VSADGVVIFAG 141 (169)
Q Consensus 92 VRvADIkfpLPYR---~KSFSlViVSDalDyLsp------kTLPeLaR-vsadglVif~G 141 (169)
+..+|+.-+.|+- ..+|.+|+.+-+|+|+.+ +.|.++.| +-..|.+||++
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 5678887765543 458999999999999865 55666666 45678888886
No 104
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=74.04 E-value=1.5 Score=31.65 Aligned_cols=92 Identities=17% Similarity=0.141 Sum_probs=53.7
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEec-ccccccC
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVS-DAVDYLS 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVS-DalDyLs 121 (169)
+.|.+|..|......|++. ..+..||++.+ ++-+..+++..-.+--+..+|+.- +|.. .+|.+|+.. ..+.|++
T Consensus 44 ~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~~~~~~ 120 (252)
T 1wzn_A 44 RVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IAFK-NEFDAVTMFFSTIMYFD 120 (252)
T ss_dssp EEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CCCC-SCEEEEEECSSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cccC-CCccEEEEcCCchhcCC
Confidence 3477888887777777665 56788887643 223333333211011234456532 3433 689999976 5666776
Q ss_pred C----CCchhhhhc-ccCceEEE
Q 038126 122 P----KTLPELARV-SADGVVIF 139 (169)
Q Consensus 122 p----kTLPeLaRv-sadglVif 139 (169)
+ +.|.++.|+ ..+|++|+
T Consensus 121 ~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 121 EEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEE
Confidence 4 556666665 45676665
No 105
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=74.03 E-value=3.7 Score=32.65 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=58.8
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccc-cCCceeEEEecccccccCC
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAF-RAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPY-R~KSFSlViVSDalDyLsp 122 (169)
.|-+|..|=.....|.+ ...+..||++.+ ++-+..+.+... --+++.|+.++++- -..+|.+|+.+..+.++.+
T Consensus 49 VLDlGcGtG~~a~~La~-~g~~V~gvD~S~~ml~~Ar~~~~~~~--v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~ 125 (261)
T 3iv6_A 49 VAVIGASTRFLIEKALE-RGASVTVFDFSQRMCDDLAEALADRC--VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTT 125 (261)
T ss_dssp EEEECTTCHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHTSSSC--CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCH
T ss_pred EEEEeCcchHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHhcc--ceeeeeecccccccccCCCccEEEEhhhhHhCCH
Confidence 36677777665555554 456888887653 233333332220 11233444442221 2468999999999999876
Q ss_pred ----CCchhhhhcccCceEEEecCCc
Q 038126 123 ----KTLPELARVSADGVVIFAGYPH 144 (169)
Q Consensus 123 ----kTLPeLaRvsadglVif~G~Pg 144 (169)
+.|.++.|+-..|.++++-.++
T Consensus 126 ~~~~~~l~~l~~lLPGG~l~lS~~~g 151 (261)
T 3iv6_A 126 EEARRACLGMLSLVGSGTVRASVKLG 151 (261)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEBS
T ss_pred HHHHHHHHHHHHhCcCcEEEEEeccC
Confidence 5677788766889998875443
No 106
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=73.36 E-value=0.81 Score=36.69 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=54.7
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhcc------eeeeeecCcccccCCceeEEEecccc
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKGI------VQATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKGi------VRvADIkfpLPYR~KSFSlViVSDal 117 (169)
|.+|-.+..+...+++.. ..+.-+||.-+ ++-+..+.+.+ ..|+ +..+|..-.++....+|.+||+ |..
T Consensus 121 LdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~-~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~-d~~ 198 (321)
T 2pt6_A 121 LVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI-SCGYEDKRVNVFIEDASKFLENVTNTYDVIIV-DSS 198 (321)
T ss_dssp EEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-SGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE-ECC
T ss_pred EEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccCCCcEEEEEccHHHHHhhcCCCceEEEE-CCc
Confidence 788888988888888763 45667776432 22233332221 1122 3456654445544678998885 665
Q ss_pred cccCC-------CCchhhhh-cccCceEEEe-cCCc
Q 038126 118 DYLSP-------KTLPELAR-VSADGVVIFA-GYPH 144 (169)
Q Consensus 118 DyLsp-------kTLPeLaR-vsadglVif~-G~Pg 144 (169)
|.+.| ..+.++.| +..+|++++. +.|.
T Consensus 199 ~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 234 (321)
T 2pt6_A 199 DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLW 234 (321)
T ss_dssp CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTT
T ss_pred CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 54433 22344444 4678888874 3443
No 107
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=73.18 E-value=4.4 Score=30.69 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=53.2
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHH-HHhcc---ee--eeeecCcccccCCceeEEEeccccc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSL-VRKGI---VQ--ATDIKFPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksL-VrKGi---VR--vADIkfpLPYR~KSFSlViVSDalD 118 (169)
.|.+|..+-.....|++.- ..+..|++.- ++-..++.. .+.|+ |+ ..|+.- +|+. ..|.+|+.++.|.
T Consensus 169 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~~D~v~~~~~l~ 243 (335)
T 2r3s_A 169 VLDISASHGLFGIAVAQHNPNAEIFGVDWA---SVLEVAKENARIQGVASRYHTIAGSAFE-VDYG-NDYDLVLLPNFLH 243 (335)
T ss_dssp EEEETCTTCHHHHHHHHHCTTCEEEEEECH---HHHHHHHHHHHHHTCGGGEEEEESCTTT-SCCC-SCEEEEEEESCGG
T ss_pred EEEECCCcCHHHHHHHHHCCCCeEEEEecH---HHHHHHHHHHHhcCCCcceEEEeccccc-CCCC-CCCcEEEEcchhc
Confidence 3667777777777776652 4566676654 222223322 22232 33 345432 2332 3499999999999
Q ss_pred ccCC----CCchhhhhc-ccCceEEEec
Q 038126 119 YLSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 119 yLsp----kTLPeLaRv-sadglVif~G 141 (169)
+++. +.|-++.|+ ..+|.+++.-
T Consensus 244 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 244 HFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 9965 566666665 4567555543
No 108
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=73.16 E-value=6.8 Score=28.39 Aligned_cols=96 Identities=10% Similarity=-0.007 Sum_probs=55.6
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh-c---ceeeeeecCc-ccccCCceeEEEe-cccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK-G---IVQATDIKFP-LAFRAKSFSLAIV-SDAVDY 119 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK-G---iVRvADIkfp-LPYR~KSFSlViV-SDalDy 119 (169)
.|.+|..|-.....|.+....+.+|||+.+ +.-..++...++ | -+..+|+.-. .|+...+|.+|+. +..+..
T Consensus 64 vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~ 141 (236)
T 1zx0_A 64 VLEVGFGMAIAASKVQEAPIDEHWIIECND--GVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSE 141 (236)
T ss_dssp EEEECCTTSHHHHHHHTSCEEEEEEEECCH--HHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBG
T ss_pred EEEEeccCCHHHHHHHhcCCCeEEEEcCCH--HHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcccch
Confidence 488888888777777655555889988764 222222222221 2 1233444321 2677889999988 555411
Q ss_pred cCC------CCchhhhhc-ccCceEEEecCC
Q 038126 120 LSP------KTLPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 120 Lsp------kTLPeLaRv-sadglVif~G~P 143 (169)
-.+ ..|.++.|+ ..+|+++|.-+.
T Consensus 142 ~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 142 ETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred hhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 111 226777776 457777776543
No 109
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=72.88 E-value=2.5 Score=29.55 Aligned_cols=103 Identities=8% Similarity=-0.043 Sum_probs=57.9
Q ss_pred hhhccCCCchhhhhhhhcc-cccccccccccC--CchhhHHHHHHHHhcc--ee--eeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKE-EDNEAWGVEPFD--SDDADANRMSLVRKGI--VQ--ATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkE-e~tEAWGVEPyd--~edad~~CksLVrKGi--VR--vADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|.+|..+-.....|++. ...+..|+|+.+ ++-+..+++.+ |+ |+ ..|+.-.. ...+|++|+. +.+
T Consensus 68 ~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~--~~~~~D~i~~-~~~ 141 (207)
T 1jsx_A 68 RFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL---KLENIEPVQSRVEEFP--SEPPFDGVIS-RAF 141 (207)
T ss_dssp EEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCSSEEEEECCTTTSC--CCSCEEEEEC-SCS
T ss_pred eEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCeEEEecchhhCC--ccCCcCEEEE-ecc
Confidence 3477888887776666654 356888888653 23344443332 33 33 34553322 3468999984 443
Q ss_pred cccCCCCchhhhhc-ccCceEEEecCCcchhhhhhhhhh
Q 038126 118 DYLSPKTLPELARV-SADGVVIFAGYPHQQRAKVSELSK 155 (169)
Q Consensus 118 DyLspkTLPeLaRv-sadglVif~G~Pgqqrakvaelsk 155 (169)
+.+ ++.+.++.|+ ..+|.+++.-.+.|. ..+.++.+
T Consensus 142 ~~~-~~~l~~~~~~L~~gG~l~~~~~~~~~-~~~~~~~~ 178 (207)
T 1jsx_A 142 ASL-NDMVSWCHHLPGEQGRFYALKGQMPE-DEIALLPE 178 (207)
T ss_dssp SSH-HHHHHHHTTSEEEEEEEEEEESSCCH-HHHHTSCT
T ss_pred CCH-HHHHHHHHHhcCCCcEEEEEeCCCch-HHHHHHhc
Confidence 221 1455566554 556777776555543 55565554
No 110
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=72.77 E-value=2.6 Score=33.55 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=52.8
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHH------HhcceeeeeecCcccccCCceeEEEecc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLV------RKGIVQATDIKFPLAFRAKSFSLAIVSD 115 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLV------rKGiVRvADIkfpLPYR~KSFSlViVSD 115 (169)
+.|.+|-.++.+...|++.. ..+..+||.-+ ++-+..+...+- .+=-+.++|..-.++....+|++||+ |
T Consensus 86 ~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~-D 164 (294)
T 3adn_A 86 HVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS-D 164 (294)
T ss_dssp EEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE-C
T ss_pred EEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE-C
Confidence 34889999999999999873 45677777533 222333322220 12245677865556666789998877 6
Q ss_pred cccccCC-C------Cchhhhh-cccCceEEEec
Q 038126 116 AVDYLSP-K------TLPELAR-VSADGVVIFAG 141 (169)
Q Consensus 116 alDyLsp-k------TLPeLaR-vsadglVif~G 141 (169)
.-|-..| . .+-++.| +..+|++++..
T Consensus 165 ~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 165 CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp C----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 6554443 1 2233343 56788877743
No 111
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=71.58 E-value=3.9 Score=29.73 Aligned_cols=106 Identities=9% Similarity=-0.021 Sum_probs=60.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc--eeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI--VQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi--VRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|-+|..+-.+...|.+. ..+.+|||+.+ ++-+..+++.+--.+. +..+|+.-.++.- .+|.+|+....++ +
T Consensus 60 LDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~~~---~ 134 (204)
T 3njr_A 60 WDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGGGGS---Q 134 (204)
T ss_dssp EEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECSCCC---H
T ss_pred EEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECCccc---H
Confidence 66677775555556555 77899998653 3334444433211212 3345655444433 4799998766542 2
Q ss_pred CCchhhhh-cccCceEEEecCC-cchhhhhhhhhhcC
Q 038126 123 KTLPELAR-VSADGVVIFAGYP-HQQRAKVSELSKFG 157 (169)
Q Consensus 123 kTLPeLaR-vsadglVif~G~P-gqqrakvaelskfg 157 (169)
..+.++.| +...|.+++.... .+...-.+.+.+.|
T Consensus 135 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 135 ALYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHG 171 (204)
T ss_dssp HHHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCC
Confidence 26778777 4678888888754 33333334445554
No 112
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=71.55 E-value=2.8 Score=29.95 Aligned_cols=94 Identities=12% Similarity=0.065 Sum_probs=53.2
Q ss_pred hhccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHH------HHhcceeeeeecCcccccCCceeEEEecc
Q 038126 46 RTGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSL------VRKGIVQATDIKFPLAFRAKSFSLAIVSD 115 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksL------VrKGiVRvADIkfpLPYR~KSFSlViVSD 115 (169)
.|.+|-.+-.....|.+. ...+..|+|+.+ ++-+..+++.+ ..+=-+..+|+... +....+|.+|++..
T Consensus 81 vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~i~~~~ 159 (226)
T 1i1n_A 81 ALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDAIHVGA 159 (226)
T ss_dssp EEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEEEEECS
T ss_pred EEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCEEEECC
Confidence 366777776665555543 225788888653 33444444432 01112345666533 23356799999887
Q ss_pred cccccCCCCchhhhhc-ccCceEEEecCCc
Q 038126 116 AVDYLSPKTLPELARV-SADGVVIFAGYPH 144 (169)
Q Consensus 116 alDyLspkTLPeLaRv-sadglVif~G~Pg 144 (169)
.+.. .+.++.|+ ..+|.++++-.|.
T Consensus 160 ~~~~----~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 160 AAPV----VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp BBSS----CCHHHHHTEEEEEEEEEEESCT
T ss_pred chHH----HHHHHHHhcCCCcEEEEEEecC
Confidence 7643 34566664 5677777765443
No 113
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=71.47 E-value=1.1 Score=34.66 Aligned_cols=95 Identities=18% Similarity=0.155 Sum_probs=54.0
Q ss_pred hhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHh--cc-------------eeeeeecCcccccCCceeE
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRK--GI-------------VQATDIKFPLAFRAKSFSL 110 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrK--Gi-------------VRvADIkfpLPYR~KSFSl 110 (169)
.|.+|-.+..+...|++....+..+||.-+ ++-..|+.-.+- |+ +..+|..--|+. ..+|.+
T Consensus 79 VLdiG~G~G~~~~~l~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~ 155 (281)
T 1mjf_A 79 VLVIGGGDGGTVREVLQHDVDEVIMVEIDE--DVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDV 155 (281)
T ss_dssp EEEEECTTSHHHHHHTTSCCSEEEEEESCH--HHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEE
T ss_pred EEEEcCCcCHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCeeE
Confidence 378899999998888887445778887532 122222221111 22 344565322443 678999
Q ss_pred EEecccccccCC-C------Cchhhhh-cccCceEEEe-cCCc
Q 038126 111 AIVSDAVDYLSP-K------TLPELAR-VSADGVVIFA-GYPH 144 (169)
Q Consensus 111 ViVSDalDyLsp-k------TLPeLaR-vsadglVif~-G~Pg 144 (169)
||+ |..+...| + .+.++.| +..+|++++. +.|-
T Consensus 156 Ii~-d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 156 IIA-DSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVY 197 (281)
T ss_dssp EEE-ECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred EEE-CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcc
Confidence 885 77665443 2 2344444 4668888774 5553
No 114
>2kyg_C Protein CBFA2T1; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=71.08 E-value=0.69 Score=29.80 Aligned_cols=16 Identities=38% Similarity=0.594 Sum_probs=14.5
Q ss_pred CCccCCCCccccceEE
Q 038126 1 MAKSRTGSGYCNDRIL 16 (169)
Q Consensus 1 ~~~~~~~~~~~~~~i~ 16 (169)
||.||.|+||-.+-||
T Consensus 2 ~~~~r~gtGYVp~EiW 17 (38)
T 2kyg_C 2 MADIGSASGYVPEEIW 17 (38)
T ss_dssp CSCCSCCCSSCCSHHH
T ss_pred cccCCCCCCCCcHHHH
Confidence 8999999999988877
No 115
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=71.01 E-value=1.9 Score=30.77 Aligned_cols=68 Identities=9% Similarity=-0.116 Sum_probs=38.1
Q ss_pred hccCCC-chhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEec
Q 038126 47 TGRDPE-TCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVS 114 (169)
Q Consensus 47 LHvGPd-TC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVS 114 (169)
|-+|-. +..+...|.+.-..+..|||..+ ++-+..|++..--+=-+..+|+....++...+|++|+..
T Consensus 60 LDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 60 LEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp EEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEEC
T ss_pred EEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEEC
Confidence 677777 55544444443367788887643 233444433221112345567644456667899999854
No 116
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=70.00 E-value=1.2 Score=35.05 Aligned_cols=96 Identities=15% Similarity=0.024 Sum_probs=53.6
Q ss_pred hhccCCCchhhhhhhhcc-cccccccccccC--CchhhHHHHHHHHhc------ceeeeeecCcccccCCceeEEEeccc
Q 038126 46 RTGRDPETCSVVCKLLKE-EDNEAWGVEPFD--SDDADANRMSLVRKG------IVQATDIKFPLAFRAKSFSLAIVSDA 116 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkE-e~tEAWGVEPyd--~edad~~CksLVrKG------iVRvADIkfpLPYR~KSFSlViVSDa 116 (169)
.|.+|-.+..+...|++. ...+..+||.-+ ++-+..+.+.+ ..+ -+..+|..-.++....+|.+||+ |+
T Consensus 94 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~-~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~-d~ 171 (296)
T 1inl_A 94 VLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQT-SCGFDDPRAEIVIANGAEYVRKFKNEFDVIII-DS 171 (296)
T ss_dssp EEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHH-HGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE-EC
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhh-ccccCCCceEEEECcHHHHHhhCCCCceEEEE-cC
Confidence 377888888888888876 345677776532 22233333221 012 23456654445555688999885 66
Q ss_pred ccc-cCC-------CCchhhhh-cccCceEEEec-CC
Q 038126 117 VDY-LSP-------KTLPELAR-VSADGVVIFAG-YP 143 (169)
Q Consensus 117 lDy-Lsp-------kTLPeLaR-vsadglVif~G-~P 143 (169)
.+. +.| ..+.++.| +..+|++++.. .|
T Consensus 172 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 172 TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp ----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 554 332 33445444 56788888763 44
No 117
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=69.75 E-value=6.2 Score=30.48 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=53.6
Q ss_pred hhccCCCc--hhhhhhhhcc--cccccccccccCCchhhHHHHHHHH-hcce--eeeeecCc------------ccccCC
Q 038126 46 RTGRDPET--CSVVCKLLKE--EDNEAWGVEPFDSDDADANRMSLVR-KGIV--QATDIKFP------------LAFRAK 106 (169)
Q Consensus 46 aLHvGPdT--C~VVskLLkE--e~tEAWGVEPyd~edad~~CksLVr-KGiV--RvADIkfp------------LPYR~K 106 (169)
.|.+|-.+ -..+..++.+ .+.+..||+.. ...-...+.+.. .+-+ ..+|+.-+ +|+ .
T Consensus 81 vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~--~ 156 (274)
T 2qe6_A 81 FLDLGSGLPTVQNTHEVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF--S 156 (274)
T ss_dssp EEEETCCSCCSSCHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT--T
T ss_pred EEEECCCCCCCChHHHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC--C
Confidence 35555444 2223344433 24567777653 223333343332 2333 44666321 333 3
Q ss_pred ceeEEEecccccccCC----CCchhhhh-cccCceEEEecC
Q 038126 107 SFSLAIVSDAVDYLSP----KTLPELAR-VSADGVVIFAGY 142 (169)
Q Consensus 107 SFSlViVSDalDyLsp----kTLPeLaR-vsadglVif~G~ 142 (169)
+|.+|+...+|-|++. ..|-+++| +...|.++|+-+
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 8999999999999986 67888888 556777777653
No 118
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=69.71 E-value=2.5 Score=33.99 Aligned_cols=96 Identities=16% Similarity=0.061 Sum_probs=54.3
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHHh---cc------eeeeeecCcccccCCceeEEEecc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVRK---GI------VQATDIKFPLAFRAKSFSLAIVSD 115 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVrK---Gi------VRvADIkfpLPYR~KSFSlViVSD 115 (169)
.|.+|-.+..+...|++.. ..+.-+||.-+ ++-..|+....+ |+ +.++|..-.|+....+|.+||+ |
T Consensus 112 VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~-d 188 (314)
T 2b2c_A 112 VLIIGGGDGGILREVLKHESVEKVTMCEIDE--MVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT-D 188 (314)
T ss_dssp EEEESCTTSHHHHHHTTCTTCCEEEEECSCH--HHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE-C
T ss_pred EEEEcCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE-c
Confidence 4888999999998888763 45666776432 122333332221 22 4556664445555678998885 7
Q ss_pred cccccCC-------CCchhhhh-cccCceEEEe-cCCc
Q 038126 116 AVDYLSP-------KTLPELAR-VSADGVVIFA-GYPH 144 (169)
Q Consensus 116 alDyLsp-------kTLPeLaR-vsadglVif~-G~Pg 144 (169)
+.+.+.| ..+-++.| +..+|++++. |.|-
T Consensus 189 ~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 189 SSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp CC-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred CCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 7665544 33444444 4667887775 3554
No 119
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=69.60 E-value=2.6 Score=30.41 Aligned_cols=98 Identities=9% Similarity=0.054 Sum_probs=56.8
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH---HhcceeeeeecCcccc-cCCc-eeEEEeccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV---RKGIVQATDIKFPLAF-RAKS-FSLAIVSDAVD 118 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV---rKGiVRvADIkfpLPY-R~KS-FSlViVSDalD 118 (169)
.|-+|-.|-.+...+++....+..|||..+ ++-+..|.+..- .+--+..+|+.-.+|. ...+ |.+|+....
T Consensus 57 vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~-- 134 (201)
T 2ift_A 57 CLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPP-- 134 (201)
T ss_dssp EEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCC--
T ss_pred EEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCC--
Confidence 366666666655556666556788888653 334545544321 1112344565433443 3568 999886544
Q ss_pred ccCC---CCchhhhh---cccCceEEEecCCcc
Q 038126 119 YLSP---KTLPELAR---VSADGVVIFAGYPHQ 145 (169)
Q Consensus 119 yLsp---kTLPeLaR---vsadglVif~G~Pgq 145 (169)
|-.. +.+.++.+ +..+|++++.-.|.+
T Consensus 135 ~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 135 FHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 2222 45666643 678899988877665
No 120
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=68.86 E-value=5.5 Score=30.25 Aligned_cols=92 Identities=12% Similarity=0.030 Sum_probs=58.3
Q ss_pred hhccCCCchhhhhhhh--cccccccccccccCCchhhHHHHHHHH-hcc-----eeeeeecCcccccCCceeEEEecccc
Q 038126 46 RTGRDPETCSVVCKLL--KEEDNEAWGVEPFDSDDADANRMSLVR-KGI-----VQATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 46 aLHvGPdTC~VVskLL--kEe~tEAWGVEPyd~edad~~CksLVr-KGi-----VRvADIkfpLPYR~KSFSlViVSDal 117 (169)
.|-+|-.+-.....|. .....+..|||+.+ +.-..++...+ .|+ +..+|+.- +|+. .+|++|+....+
T Consensus 122 vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~ 197 (305)
T 3ocj_A 122 VASVPCGWMSELLALDYSACPGVQLVGIDYDP--EALDGATRLAAGHALAGQITLHRQDAWK-LDTR-EGYDLLTSNGLN 197 (305)
T ss_dssp EEETTCTTCHHHHTSCCTTCTTCEEEEEESCH--HHHHHHHHHHTTSTTGGGEEEEECCGGG-CCCC-SCEEEEECCSSG
T ss_pred EEEecCCCCHHHHHHHHhcCCCCeEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECchhc-CCcc-CCeEEEEECChh
Confidence 3777877777666663 44566788887642 23333333332 222 34566543 4555 899999999999
Q ss_pred cccC-CC----Cchhhhhc-ccCceEEEec
Q 038126 118 DYLS-PK----TLPELARV-SADGVVIFAG 141 (169)
Q Consensus 118 DyLs-pk----TLPeLaRv-sadglVif~G 141 (169)
.|+. +. .|.++.|+ ..+|.+++..
T Consensus 198 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 198 IYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp GGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 9985 43 47888875 4567777665
No 121
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=68.61 E-value=6 Score=28.25 Aligned_cols=87 Identities=18% Similarity=0.165 Sum_probs=49.6
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc-----eeeeeecCcccccCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI-----VQATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi-----VRvADIkfpLPYR~KSFSlViVSDalDy 119 (169)
|-+|..+-.....|++. ..+..|+|+.+ ++-+..+.+. .|+ +..+|+.-++ ....+|++||. |.
T Consensus 96 ldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~---~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~-~~--- 166 (248)
T 2yvl_A 96 LEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKK---FNLGKNVKFFNVDFKDAE-VPEGIFHAAFV-DV--- 166 (248)
T ss_dssp EEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHH---TTCCTTEEEECSCTTTSC-CCTTCBSEEEE-CS---
T ss_pred EEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHH---cCCCCcEEEEEcChhhcc-cCCCcccEEEE-CC---
Confidence 56666666666666666 67778887543 2223333322 233 3335554433 13568999986 22
Q ss_pred cCC-CCchhhhhc-ccCceEEEecC
Q 038126 120 LSP-KTLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 120 Lsp-kTLPeLaRv-sadglVif~G~ 142 (169)
-.| ..|.++.|+ ..+|.+++.-.
T Consensus 167 ~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 167 REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 244 777888774 55676666554
No 122
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=68.58 E-value=2 Score=30.05 Aligned_cols=92 Identities=12% Similarity=0.054 Sum_probs=55.9
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCccc-ccCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFPLA-FRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfpLP-YR~KSFSlViVSDalDy 119 (169)
|-+|-.|-.+...+++....+..|||..+ ++-+..|.+. .|+ +..+|+.-.++ +...+|.+|+......+
T Consensus 49 LDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~---~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~ 125 (189)
T 3p9n_A 49 LDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEA---LGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNV 125 (189)
T ss_dssp EEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHH---HTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTS
T ss_pred EEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHH---cCCCceEEEEccHHHHHhhccCCCccEEEECCCCCc
Confidence 66677776665557776666788888653 3334444433 243 44566543332 34678999887555333
Q ss_pred cCC---CCchhhhh---cccCceEEEec
Q 038126 120 LSP---KTLPELAR---VSADGVVIFAG 141 (169)
Q Consensus 120 Lsp---kTLPeLaR---vsadglVif~G 141 (169)
..+ +.+.++.| +..+|++++.-
T Consensus 126 ~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 126 DSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp CHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred chhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 212 66777776 67888888754
No 123
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=68.30 E-value=3.8 Score=28.51 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=53.4
Q ss_pred hccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|..+-.....|++. ...+..|||..+ ++-+..+++..- .+=-+..+|+.-..++-..+|++|+..-.+ +
T Consensus 27 LDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~--~ 104 (197)
T 3eey_A 27 VDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY--L 104 (197)
T ss_dssp EESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB--C
T ss_pred EEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc--c
Confidence 66666666666666655 345788887643 233333333220 111234466543333555899999865322 2
Q ss_pred CC-------------CCchhhhh-cccCceEEEecCCc
Q 038126 121 SP-------------KTLPELAR-VSADGVVIFAGYPH 144 (169)
Q Consensus 121 sp-------------kTLPeLaR-vsadglVif~G~Pg 144 (169)
.. +.|.++.| +..+|.+++..+++
T Consensus 105 ~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 105 PSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp TTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred cCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 21 34566666 45678888887665
No 124
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=65.36 E-value=1.9 Score=30.80 Aligned_cols=93 Identities=11% Similarity=-0.028 Sum_probs=53.0
Q ss_pred hccCCCchhhhhhhhccc------ccccccccccC--CchhhHHHHHHH------HhcceeeeeecCccc---ccCCcee
Q 038126 47 TGRDPETCSVVCKLLKEE------DNEAWGVEPFD--SDDADANRMSLV------RKGIVQATDIKFPLA---FRAKSFS 109 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe------~tEAWGVEPyd--~edad~~CksLV------rKGiVRvADIkfpLP---YR~KSFS 109 (169)
|.+|-.+-.....|.+.- ..+..|||+.+ ++-+..+.+..- .+=-+...|+.-.+| ....+|.
T Consensus 85 LdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 164 (227)
T 2pbf_A 85 IDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFD 164 (227)
T ss_dssp EEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEE
T ss_pred EEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcC
Confidence 667777766555555432 35888998754 333444443321 111234456654331 3457899
Q ss_pred EEEecccccccCCCCchhhhhc-ccCceEEEecCC
Q 038126 110 LAIVSDAVDYLSPKTLPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 110 lViVSDalDyLspkTLPeLaRv-sadglVif~G~P 143 (169)
+|++...+..+ +.++.++ ..+|.+++.-.|
T Consensus 165 ~I~~~~~~~~~----~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 165 AIHVGASASEL----PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EEEECSBBSSC----CHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCchHHH----HHHHHHhcCCCcEEEEEEcc
Confidence 99998877643 5666654 556776666443
No 125
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=64.98 E-value=4.1 Score=29.32 Aligned_cols=89 Identities=11% Similarity=0.048 Sum_probs=50.4
Q ss_pred hccCCCchhhhhhhhcc-c-ccccccccccC--CchhhHHHHHHHHhc--c--eeeeeecCcccccCCceeEEEeccccc
Q 038126 47 TGRDPETCSVVCKLLKE-E-DNEAWGVEPFD--SDDADANRMSLVRKG--I--VQATDIKFPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE-e-~tEAWGVEPyd--~edad~~CksLVrKG--i--VRvADIkfpLPYR~KSFSlViVSDalD 118 (169)
|.+|-.+......|++. . ..+..|+|+.+ ++-+..+.+... | . +...|+.- +|+...+|++|+. |
T Consensus 101 LdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~-~~~~~~~~D~v~~-~--- 173 (258)
T 2pwy_A 101 LEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW--QVENVRFHLGKLEE-AELEEAAYDGVAL-D--- 173 (258)
T ss_dssp EEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC--CCCCEEEEESCGGG-CCCCTTCEEEEEE-E---
T ss_pred EEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc--CCCCEEEEECchhh-cCCCCCCcCEEEE-C---
Confidence 66777776666666665 2 56778887532 233333332210 3 2 33456542 3455678999986 3
Q ss_pred ccCC-CCchhhhhcc-cCceEEEecC
Q 038126 119 YLSP-KTLPELARVS-ADGVVIFAGY 142 (169)
Q Consensus 119 yLsp-kTLPeLaRvs-adglVif~G~ 142 (169)
.-.+ +.|.++.|+- .+|.+++...
T Consensus 174 ~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 174 LMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 2233 6778888754 4566666553
No 126
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=61.59 E-value=20 Score=26.79 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=39.7
Q ss_pred hhhccCCCchhhhhhhhcc-cccccccccccC--CchhhHHHHHHHH-hcceeeeeecCcccccCCceeEEEec
Q 038126 45 VRTGRDPETCSVVCKLLKE-EDNEAWGVEPFD--SDDADANRMSLVR-KGIVQATDIKFPLAFRAKSFSLAIVS 114 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkE-e~tEAWGVEPyd--~edad~~CksLVr-KGiVRvADIkfpLPYR~KSFSlViVS 114 (169)
+.|-+|-.+-.+...|.++ ...+..|+|..+ ++-+..|.+.+-- +--+..+|+.-++| ..+|.+|+..
T Consensus 112 ~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~n 183 (276)
T 2b3t_A 112 RILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSN 183 (276)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEEC
T ss_pred EEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEEC
Confidence 3477788877776666654 356788888643 3334455443311 11133456654444 5689998875
No 127
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=61.52 E-value=3.9 Score=28.78 Aligned_cols=109 Identities=13% Similarity=0.084 Sum_probs=60.0
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHH-HhcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLV-RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLV-rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|-+|..+-.+...|.+.. ..+..|||+.+ ++-+..+.+..- .+=-+..+|+.-.++.- .+|++|+....+. -.+
T Consensus 45 LDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D~i~~~~~~~-~~~ 122 (204)
T 3e05_A 45 WDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPDRVFIGGSGG-MLE 122 (204)
T ss_dssp EEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCSEEEESCCTT-CHH
T ss_pred EEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCCEEEECCCCc-CHH
Confidence 667777766655666553 46788887643 233444433221 11113345654334432 6799998876654 222
Q ss_pred CCchhhhh-cccCceEEEecCCcchhhh-hhhhhhcC
Q 038126 123 KTLPELAR-VSADGVVIFAGYPHQQRAK-VSELSKFG 157 (169)
Q Consensus 123 kTLPeLaR-vsadglVif~G~Pgqqrak-vaelskfg 157 (169)
+.+.++.| +..+|.+++....-.+... ...+.+.|
T Consensus 123 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 123 EIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp HHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCC
Confidence 66677776 5677888888655333333 33344555
No 128
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=61.22 E-value=3.9 Score=31.45 Aligned_cols=93 Identities=11% Similarity=-0.056 Sum_probs=54.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH----------------------hcceeeeeecCccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR----------------------KGIVQATDIKFPLA 102 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr----------------------KGiVRvADIkfpLP 102 (169)
+.|-+|=.+=.....|.+ ..-++.||+..+- +-..++.... +--+.++|+ +-||
T Consensus 71 ~vLD~GCG~G~~~~~La~-~G~~V~gvD~S~~--~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~-~~l~ 146 (252)
T 2gb4_A 71 RVFFPLCGKAIEMKWFAD-RGHTVVGVEISEI--GIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI-FDLP 146 (252)
T ss_dssp EEEETTCTTCTHHHHHHH-TTCEEEEECSCHH--HHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT-TTGG
T ss_pred eEEEeCCCCcHHHHHHHH-CCCeEEEEECCHH--HHHHHHHhcccccccccccccccccccccCCCceEEEECcc-ccCC
Confidence 346666555444444444 4557888876542 1112221110 112455777 4577
Q ss_pred ccC-CceeEEEecccccccCC----CCchhhhhc-ccCceEEEec
Q 038126 103 FRA-KSFSLAIVSDAVDYLSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 103 YR~-KSFSlViVSDalDyLsp----kTLPeLaRv-sadglVif~G 141 (169)
+.. .+|.+|+...+|.+|.+ +.+-+++|+ ...|.++++.
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 753 79999999999999976 345667774 4567665443
No 129
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=60.61 E-value=3 Score=32.39 Aligned_cols=98 Identities=17% Similarity=0.164 Sum_probs=56.5
Q ss_pred hhhccCCCchhhhhhhhcc-cccccccccccC--CchhhHHHHHH---H--HhcceeeeeecCcccccCCceeEEEeccc
Q 038126 45 VRTGRDPETCSVVCKLLKE-EDNEAWGVEPFD--SDDADANRMSL---V--RKGIVQATDIKFPLAFRAKSFSLAIVSDA 116 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkE-e~tEAWGVEPyd--~edad~~CksL---V--rKGiVRvADIkfpLPYR~KSFSlViVSDa 116 (169)
+.|.+|-.+..+...+++. ...+.-+||.-+ ++-+..+...+ . .+=-+.++|..--|+....+|.+||+ |.
T Consensus 78 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~-d~ 156 (275)
T 1iy9_A 78 HVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV-DS 156 (275)
T ss_dssp EEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE-SC
T ss_pred EEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE-CC
Confidence 3478899999998888876 345677776422 12222232221 0 01124566754335544678999886 77
Q ss_pred ccccCC-------CCchhhhh-cccCceEEEec-CC
Q 038126 117 VDYLSP-------KTLPELAR-VSADGVVIFAG-YP 143 (169)
Q Consensus 117 lDyLsp-------kTLPeLaR-vsadglVif~G-~P 143 (169)
.+...| .-+.++.| +..+|++++.. .|
T Consensus 157 ~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 157 TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 664433 22344444 56788888763 44
No 130
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=60.33 E-value=1.4 Score=31.78 Aligned_cols=94 Identities=6% Similarity=-0.142 Sum_probs=58.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcc--eeeeeecC---cccccC-CceeEEEeccccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGI--VQATDIKF---PLAFRA-KSFSLAIVSDAVD 118 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGi--VRvADIkf---pLPYR~-KSFSlViVSDalD 118 (169)
+.|-+|..|......|.+... +..||++.+ .+-..++......- +..+|+.- +.++.. .+|.+|+.+.++.
T Consensus 59 ~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~ 135 (245)
T 3ggd_A 59 PLIDFACGNGTQTKFLSQFFP-RVIGLDVSK--SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFH 135 (245)
T ss_dssp CEEEETCTTSHHHHHHHHHSS-CEEEEESCH--HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSST
T ss_pred eEEEEcCCCCHHHHHHHHhCC-CEEEEECCH--HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhh
Confidence 348889998888777776544 788887643 23333333332222 33445432 223322 2489999999999
Q ss_pred ccCC----CCchhhhhcc-cCceEEEec
Q 038126 119 YLSP----KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 119 yLsp----kTLPeLaRvs-adglVif~G 141 (169)
++.+ +.|-++.|+- .+|.+++.-
T Consensus 136 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 136 HIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp TSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9985 6777787765 457655554
No 131
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=60.27 E-value=5.7 Score=29.16 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=31.1
Q ss_pred eeeeeecCcccc----cCCceeEEEecccccccCC-----------CCchhhhh-cccCceEEEecCC
Q 038126 92 VQATDIKFPLAF----RAKSFSLAIVSDAVDYLSP-----------KTLPELAR-VSADGVVIFAGYP 143 (169)
Q Consensus 92 VRvADIkfpLPY----R~KSFSlViVSDalDyLsp-----------kTLPeLaR-vsadglVif~G~P 143 (169)
+..+|+.-+++. ...+|.+|+..-.+-+... +.+.++.| +..+|+++|++..
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 566787655543 3458998876533333322 23445555 5678999987654
No 132
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=59.97 E-value=9.3 Score=27.49 Aligned_cols=92 Identities=12% Similarity=0.012 Sum_probs=53.9
Q ss_pred hhccCCCchhhhhhhhcccc-------cccccccccC--CchhhHHHHHHH------HhcceeeeeecCcccccCCceeE
Q 038126 46 RTGRDPETCSVVCKLLKEED-------NEAWGVEPFD--SDDADANRMSLV------RKGIVQATDIKFPLAFRAKSFSL 110 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~-------tEAWGVEPyd--~edad~~CksLV------rKGiVRvADIkfpLPYR~KSFSl 110 (169)
.|.+|-.+-.....|.+.-. .+..|||+.+ ++-+..+.+.+- .+=-+..+|+.-++|- ..+|.+
T Consensus 88 VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~ 166 (227)
T 1r18_A 88 ILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-NAPYNA 166 (227)
T ss_dssp EEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-GCSEEE
T ss_pred EEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-CCCccE
Confidence 36677777666555555322 4788988654 333444444321 1112455677655543 268999
Q ss_pred EEecccccccCCCCchhhhhc-ccCceEEEecC
Q 038126 111 AIVSDAVDYLSPKTLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 111 ViVSDalDyLspkTLPeLaRv-sadglVif~G~ 142 (169)
|++...+.++. .++.|+ ..+|.+++.=.
T Consensus 167 I~~~~~~~~~~----~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 167 IHVGAAAPDTP----TELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEECSCBSSCC----HHHHHTEEEEEEEEEEES
T ss_pred EEECCchHHHH----HHHHHHhcCCCEEEEEEe
Confidence 99998887653 566654 45676666443
No 133
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=59.30 E-value=4.5 Score=30.36 Aligned_cols=88 Identities=9% Similarity=-0.028 Sum_probs=53.3
Q ss_pred hccCCCchhhhhhhhcc-----cccccccccccCC--chhhHHHHHHHHhcceeeeeecCc--ccccC-CceeEEEeccc
Q 038126 47 TGRDPETCSVVCKLLKE-----EDNEAWGVEPFDS--DDADANRMSLVRKGIVQATDIKFP--LAFRA-KSFSLAIVSDA 116 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE-----e~tEAWGVEPyd~--edad~~CksLVrKGiVRvADIkfp--LPYR~-KSFSlViVSDa 116 (169)
|-+|-.|-.....|.+. ...+..|||..+- +-+. .+-.+=-+..+|+.-. ||+-. .+|.+|++..+
T Consensus 86 LDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 86 VELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp EEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred EEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 67777776665555543 4678999998653 3232 2211122455777654 56543 37999876443
Q ss_pred ccccC-CCCchhhhh--cccCceEEEe
Q 038126 117 VDYLS-PKTLPELAR--VSADGVVIFA 140 (169)
Q Consensus 117 lDyLs-pkTLPeLaR--vsadglVif~ 140 (169)
+.. ++.|.++.| +...|++++.
T Consensus 162 --~~~~~~~l~~~~r~~LkpGG~lv~~ 186 (236)
T 2bm8_A 162 --HANTFNIMKWAVDHLLEEGDYFIIE 186 (236)
T ss_dssp --CSSHHHHHHHHHHHTCCTTCEEEEC
T ss_pred --hHhHHHHHHHHHHhhCCCCCEEEEE
Confidence 222 255666764 7788999985
No 134
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=59.14 E-value=19 Score=28.67 Aligned_cols=89 Identities=12% Similarity=0.086 Sum_probs=52.0
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHH-Hhcc---e--eeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLV-RKGI---V--QATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLV-rKGi---V--RvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|-.|-.....|.+....+..|||+.++ -..++..+ +.|+ | ..+|+.- +|+...+|++||......+|
T Consensus 71 LDvGcG~G~~~~~la~~g~~~v~gvD~s~~---l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~~~l 146 (349)
T 3q7e_A 71 LDVGSGTGILCMFAAKAGARKVIGIECSSI---SDYAVKIVKANKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMGYCL 146 (349)
T ss_dssp EEESCTTSHHHHHHHHTTCSEEEEEECSTH---HHHHHHHHHHTTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCBBTB
T ss_pred EEEeccchHHHHHHHHCCCCEEEEECcHHH---HHHHHHHHHHcCCCCcEEEEECcHHH-ccCCCCceEEEEEccccccc
Confidence 778888887777777766668999999842 22223222 2332 3 3455532 24446889998865443334
Q ss_pred CC-CCchh----hhh-cccCceEEE
Q 038126 121 SP-KTLPE----LAR-VSADGVVIF 139 (169)
Q Consensus 121 sp-kTLPe----LaR-vsadglVif 139 (169)
.. ..++. +.| +..+|++|+
T Consensus 147 ~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 147 FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 22 33443 345 456777764
No 135
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=58.14 E-value=19 Score=28.22 Aligned_cols=88 Identities=11% Similarity=0.090 Sum_probs=49.8
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcc---e--eeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGI---V--QATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGi---V--RvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|-.|-.+...+.+....+..|||+.++ + ..++..++ .|+ | ..+|+. .+|....+|++||..-...+|
T Consensus 43 LDiGcGtG~ls~~la~~g~~~v~~vD~s~~--~-~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~~~l 118 (328)
T 1g6q_1 43 LDVGCGTGILSMFAAKHGAKHVIGVDMSSI--I-EMAKELVELNGFSDKITLLRGKLE-DVHLPFPKVDIIISEWMGYFL 118 (328)
T ss_dssp EEETCTTSHHHHHHHHTCCSEEEEEESSTH--H-HHHHHHHHHTTCTTTEEEEESCTT-TSCCSSSCEEEEEECCCBTTB
T ss_pred EEecCccHHHHHHHHHCCCCEEEEEChHHH--H-HHHHHHHHHcCCCCCEEEEECchh-hccCCCCcccEEEEeCchhhc
Confidence 778888877766666655568999998743 2 23333333 333 3 334543 133335789998865333344
Q ss_pred CC-CCchhh----hh-cccCceEE
Q 038126 121 SP-KTLPEL----AR-VSADGVVI 138 (169)
Q Consensus 121 sp-kTLPeL----aR-vsadglVi 138 (169)
.. ..++.+ .| +..+|++|
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 119 LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 33 333333 34 45677776
No 136
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=57.93 E-value=2.4 Score=28.81 Aligned_cols=99 Identities=9% Similarity=0.023 Sum_probs=55.2
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH--HhcceeeeeecCc---ccccCCceeEEEeccccc
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFP---LAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfp---LPYR~KSFSlViVSDalD 118 (169)
.|-+|-.+-.....+++....+..|||..+ ++.+..+.+..- .+--+..+|+.-. +|+...+|.+|+......
T Consensus 48 vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 48 ALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp EEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG
T ss_pred EEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 377777777776667776557889988653 333444443321 1122455666443 334467899888654422
Q ss_pred ccC-CCCchhh--hh-cccCceEEEecCCc
Q 038126 119 YLS-PKTLPEL--AR-VSADGVVIFAGYPH 144 (169)
Q Consensus 119 yLs-pkTLPeL--aR-vsadglVif~G~Pg 144 (169)
.-. ++.+-.+ .| +..+|++++.-.+.
T Consensus 128 ~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 128 KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 111 1334444 33 46778887765443
No 137
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=57.93 E-value=13 Score=28.55 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=57.3
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHH-HHHhcc---ee--eeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMS-LVRKGI---VQ--ATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~Cks-LVrKGi---VR--vADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|-||-.|-.....|++.- ..+..|+ |+.++-...+. +.+.|+ |+ ..|+--|+|- +|.+|+.+++|
T Consensus 172 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~---~~D~v~~~~vl 245 (332)
T 3i53_A 172 HVVDVGGGSGGLLSALLTAHEDLSGTVL---DLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA---GAGGYVLSAVL 245 (332)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC---SCSEEEEESCG
T ss_pred EEEEeCCChhHHHHHHHHHCCCCeEEEe---cCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC---CCcEEEEehhh
Confidence 44777888887777777653 3345555 44443333333 223343 44 4565546665 89999999999
Q ss_pred cccCC----CCchhhhhc-ccCceEEEec
Q 038126 118 DYLSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 118 DyLsp----kTLPeLaRv-sadglVif~G 141 (169)
.|++. +.|-++.|+ ..+|.+++.-
T Consensus 246 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 246 HDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp GGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 99987 566667665 5577776654
No 138
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=56.93 E-value=7.1 Score=32.24 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=63.6
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc----eeeeeecCc---ccccCCceeEEEecccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI----VQATDIKFP---LAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi----VRvADIkfp---LPYR~KSFSlViVSDal 117 (169)
|-+|-.+-.+-..|.+. ..+..|||..+ ++.|..|.+. .|+ +..+|+.-. +|+...+|++|++ |-=
T Consensus 291 LDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~---~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~-dPP 365 (433)
T 1uwv_A 291 LDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARL---NGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL-DPA 365 (433)
T ss_dssp EEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHH---TTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE-CCC
T ss_pred EECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHH---cCCCceEEEECCHHHHhhhhhhhcCCCCEEEE-CCC
Confidence 44444444444444444 67889998654 4556665543 343 445666543 4567778998875 310
Q ss_pred cccCCCCchhhhhcccCceEEEecCCcchhhhhhhhhhcC
Q 038126 118 DYLSPKTLPELARVSADGVVIFAGYPHQQRAKVSELSKFG 157 (169)
Q Consensus 118 DyLspkTLPeLaRvsadglVif~G~Pgqqrakvaelskfg 157 (169)
.--....+..|++....++|.++-.|.......+.|.+.|
T Consensus 366 r~g~~~~~~~l~~~~p~~ivyvsc~p~tlard~~~l~~~G 405 (433)
T 1uwv_A 366 RAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAG 405 (433)
T ss_dssp TTCCHHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHhcCCCeEEEEECChHHHHhhHHHHHHCC
Confidence 0000034566677788999999999988766666666554
No 139
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=55.99 E-value=5.8 Score=28.62 Aligned_cols=88 Identities=13% Similarity=-0.028 Sum_probs=53.0
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-----------------hcceeeeeecCcccccC-C
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-----------------KGIVQATDIKFPLAFRA-K 106 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-----------------KGiVRvADIkfpLPYR~-K 106 (169)
+.|-+|=.|=.....|.+. ..+..||+..+- +=..++...+ +--+..+|+ +-||+.. .
T Consensus 25 ~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~--~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~-~~l~~~~~~ 100 (203)
T 1pjz_A 25 RVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEA--AVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF-FALTARDIG 100 (203)
T ss_dssp EEEETTTCCSHHHHHHHHH-CCEEEEEEECHH--HHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC-SSSTHHHHH
T ss_pred EEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHH--HHHHHHHHccCCcccccccccccccCCccEEEECcc-ccCCcccCC
Confidence 3466666655555555544 557888876541 1122222211 112445776 3567654 7
Q ss_pred ceeEEEecccccccCC----CCchhhhhcccC-ce
Q 038126 107 SFSLAIVSDAVDYLSP----KTLPELARVSAD-GV 136 (169)
Q Consensus 107 SFSlViVSDalDyLsp----kTLPeLaRvsad-gl 136 (169)
+|.+|+...++.++.+ +.+-++.|+-.. |.
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 9999999999999976 457788886654 54
No 140
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=55.15 E-value=8.6 Score=28.91 Aligned_cols=89 Identities=10% Similarity=0.085 Sum_probs=57.0
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcc-----eeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGI-----VQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGi-----VRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|..+-.....|.+.-..+..||++.+ +.-..++...+ .|+ +..+|+. .+ ..+|.+|+...++.++
T Consensus 77 LDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~---~~~fD~v~~~~~~~~~ 150 (302)
T 3hem_A 77 LDIGCGWGSTMRHAVAEYDVNVIGLTLSE--NQYAHDKAMFDEVDSPRRKEVRIQGWE-EF---DEPVDRIVSLGAFEHF 150 (302)
T ss_dssp EEETCTTSHHHHHHHHHHCCEEEEEECCH--HHHHHHHHHHHHSCCSSCEEEEECCGG-GC---CCCCSEEEEESCGGGT
T ss_pred EEeeccCcHHHHHHHHhCCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECCHH-Hc---CCCccEEEEcchHHhc
Confidence 77787777777777766357788887642 22222333222 232 4556663 22 7899999999999999
Q ss_pred C-------C----CCchhhhhc-ccCceEEEec
Q 038126 121 S-------P----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 121 s-------p----kTLPeLaRv-sadglVif~G 141 (169)
. + +.|.++.|+ ..+|.+++..
T Consensus 151 ~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 151 ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 3 2 456677765 4567777765
No 141
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=54.93 E-value=13 Score=27.81 Aligned_cols=90 Identities=12% Similarity=0.132 Sum_probs=49.2
Q ss_pred hccCCCchhhhhhhhcc-c-ccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKE-E-DNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE-e-~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|-.+-.....|++. . ..+..|+|..+ ++-+..|.+.+- .+=-+...|+.-. +...+|++|+. |. -
T Consensus 117 LDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~V~~-~~---~ 190 (277)
T 1o54_A 117 IDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVDALFL-DV---P 190 (277)
T ss_dssp EEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEEEEEE-CC---S
T ss_pred EEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccCEEEE-CC---c
Confidence 66677776665566655 2 56788887532 233333333221 1112344565443 33468999886 32 2
Q ss_pred CC-CCchhhhhc-ccCceEEEecC
Q 038126 121 SP-KTLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 121 sp-kTLPeLaRv-sadglVif~G~ 142 (169)
.| ..|.++.|+ ..+|.+++.-.
T Consensus 191 ~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 191 DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 33 677888775 45666665543
No 142
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=54.81 E-value=1.5 Score=34.79 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=56.9
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHH---hc-------ceeeeeecCcccccCCceeEEEec
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVR---KG-------IVQATDIKFPLAFRAKSFSLAIVS 114 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVr---KG-------iVRvADIkfpLPYR~KSFSlViVS 114 (169)
.|.+|-.+..+...|++.. ..+.-+||.-+ ++-..|+.-.. .| -+.++|+.--|+....+|.+||+
T Consensus 81 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~- 157 (314)
T 1uir_A 81 VLIVGGGEGATLREVLKHPTVEKAVMVDIDG--ELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII- 157 (314)
T ss_dssp EEEEECTTSHHHHHHTTSTTCCEEEEEESCH--HHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE-
T ss_pred EEEEcCCcCHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE-
Confidence 3888999999998888863 45677777543 12223332221 12 24566765446656789999887
Q ss_pred cccccc---CC-------CCchhhhh-cccCceEEEe-cCC
Q 038126 115 DAVDYL---SP-------KTLPELAR-VSADGVVIFA-GYP 143 (169)
Q Consensus 115 DalDyL---sp-------kTLPeLaR-vsadglVif~-G~P 143 (169)
|..+.. .| ..+-++.| +..+|++++. +.|
T Consensus 158 d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 158 DLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp ECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred CCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 665554 22 22444444 4667887765 444
No 143
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=54.01 E-value=4.1 Score=30.06 Aligned_cols=92 Identities=12% Similarity=-0.001 Sum_probs=49.4
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCC--chhhHHHHHHHHhcc-eeeeeecCc---ccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDS--DDADANRMSLVRKGI-VQATDIKFP---LAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~--edad~~CksLVrKGi-VRvADIkfp---LPYR~KSFSlViVSDal 117 (169)
+.|-+|-.|-.....|.+.- ..+.+|||+.+- +..-..++.. .++ ..++|+..+ +|+. .+|.+|+. |..
T Consensus 60 ~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~-~~~ 135 (210)
T 1nt2_A 60 RVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQ-DIA 135 (210)
T ss_dssp EEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEE-CCC
T ss_pred EEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEE-ecc
Confidence 34666666655544443321 467899987652 2233333322 222 234677665 3444 78999875 432
Q ss_pred cccCCCC-chhhhhc-ccCceEEEe
Q 038126 118 DYLSPKT-LPELARV-SADGVVIFA 140 (169)
Q Consensus 118 DyLspkT-LPeLaRv-sadglVif~ 140 (169)
+....+. |.++.|+ ..+|.++++
T Consensus 136 ~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 136 QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 2111122 6777775 556777776
No 144
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=53.85 E-value=11 Score=27.73 Aligned_cols=97 Identities=16% Similarity=0.092 Sum_probs=59.2
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHh-----cc----eeeeeecCccc--ccCCceeE
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRK-----GI----VQATDIKFPLA--FRAKSFSL 110 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrK-----Gi----VRvADIkfpLP--YR~KSFSl 110 (169)
+.|-+|-.+-.....|.+.. +.+..|||..+ ++-+..+++.+-+. |+ +..+|+.-.|| +...+|+.
T Consensus 52 ~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~ 131 (246)
T 2vdv_E 52 TIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSK 131 (246)
T ss_dssp EEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEE
T ss_pred EEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCE
Confidence 44888888888887777765 45789998764 34455665554211 32 44577765577 77889999
Q ss_pred EEeccccccc----------CCCCchhhhhc-ccCceEEEec
Q 038126 111 AIVSDAVDYL----------SPKTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 111 ViVSDalDyL----------spkTLPeLaRv-sadglVif~G 141 (169)
|++.+.-.+. .+..|.+++|+ ..+|+++++.
T Consensus 132 v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 132 MFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 9854311110 01245566665 4466776643
No 145
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=53.74 E-value=26 Score=28.26 Aligned_cols=87 Identities=13% Similarity=0.173 Sum_probs=51.2
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hc-----ceeeeeec-CcccccCCceeEEEecccc-c
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KG-----IVQATDIK-FPLAFRAKSFSLAIVSDAV-D 118 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KG-----iVRvADIk-fpLPYR~KSFSlViVSDal-D 118 (169)
|-+|-.|-.....|.+....+..|||+.++- ..++..++ .| -+..+|+. +++| .+|++||. +.+ -
T Consensus 68 LDlGcGtG~ls~~la~~g~~~V~gvD~s~~~---~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~D~Iv~-~~~~~ 140 (376)
T 3r0q_C 68 LDVGTGSGILAIWSAQAGARKVYAVEATKMA---DHARALVKANNLDHIVEVIEGSVEDISLP---EKVDVIIS-EWMGY 140 (376)
T ss_dssp EEESCTTTHHHHHHHHTTCSEEEEEESSTTH---HHHHHHHHHTTCTTTEEEEESCGGGCCCS---SCEEEEEE-CCCBT
T ss_pred EEeccCcCHHHHHHHhcCCCEEEEEccHHHH---HHHHHHHHHcCCCCeEEEEECchhhcCcC---CcceEEEE-cChhh
Confidence 7778888777666776655589999987432 23333333 23 23345653 3444 78999886 554 4
Q ss_pred ccCCC-----Cchhhhh-cccCceEEEe
Q 038126 119 YLSPK-----TLPELAR-VSADGVVIFA 140 (169)
Q Consensus 119 yLspk-----TLPeLaR-vsadglVif~ 140 (169)
++.+. .|-++.| +..+|++|+.
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 44432 2333333 5567777664
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=53.12 E-value=4.8 Score=29.01 Aligned_cols=99 Identities=6% Similarity=-0.048 Sum_probs=54.1
Q ss_pred hccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHHHHhc--ceeeeeecCcccccC-----CceeEEEecc
Q 038126 47 TGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSLVRKG--IVQATDIKFPLAFRA-----KSFSLAIVSD 115 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksLVrKG--iVRvADIkfpLPYR~-----KSFSlViVSD 115 (169)
|-+|-.+-.....|.+. .+.+..|||+.+ ++-+..+.+.+--.. -+...|..-.||.-. .+|.+|++.-
T Consensus 63 LdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~ 142 (221)
T 3u81_A 63 LELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDH 142 (221)
T ss_dssp EEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECS
T ss_pred EEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcC
Confidence 66666665555555542 357888988754 344444444321111 234566544455433 6899998754
Q ss_pred cccccCC--CCchhhhhcccCceEEEec--CCcc
Q 038126 116 AVDYLSP--KTLPELARVSADGVVIFAG--YPHQ 145 (169)
Q Consensus 116 alDyLsp--kTLPeLaRvsadglVif~G--~Pgq 145 (169)
......+ +.+-++..+..+|++++.- .|+.
T Consensus 143 ~~~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~ 176 (221)
T 3u81_A 143 WKDRYLPDTLLLEKCGLLRKGTVLLADNVIVPGT 176 (221)
T ss_dssp CGGGHHHHHHHHHHTTCCCTTCEEEESCCCCCCC
T ss_pred CcccchHHHHHHHhccccCCCeEEEEeCCCCcch
Confidence 3433322 2333344567888888865 4443
No 147
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=52.58 E-value=8.4 Score=27.86 Aligned_cols=94 Identities=12% Similarity=0.051 Sum_probs=56.3
Q ss_pred hhhccCCCchhhhhhhhcc--cccccccccccCC--chhhHHHHHHHHhcceeeeeecCc--ccccCCceeEEEeccccc
Q 038126 45 VRTGRDPETCSVVCKLLKE--EDNEAWGVEPFDS--DDADANRMSLVRKGIVQATDIKFP--LAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkE--e~tEAWGVEPyd~--edad~~CksLVrKGiVRvADIkfp--LPYR~KSFSlViVSDalD 118 (169)
+.|-+|-.|-.....|++. ...+..|||+.+- +++-.+++.. ..=-+..+|+.-+ +|+-..+|.+|+. |..
T Consensus 80 ~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~-~~~- 156 (233)
T 2ipx_A 80 KVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFA-DVA- 156 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEE-CCC-
T ss_pred EEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEE-cCC-
Confidence 3477788887777777765 3468899987642 4445555443 1112345677653 5556779999886 443
Q ss_pred ccCC---C-Cchhhhhc-ccCceEEEecCC
Q 038126 119 YLSP---K-TLPELARV-SADGVVIFAGYP 143 (169)
Q Consensus 119 yLsp---k-TLPeLaRv-sadglVif~G~P 143 (169)
.| + .+.++.|+ ..+|.+++.=.|
T Consensus 157 --~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 157 --QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp --CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred --CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 34 1 25556654 567777774343
No 148
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=50.32 E-value=8.3 Score=27.70 Aligned_cols=91 Identities=11% Similarity=-0.066 Sum_probs=55.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHH--HhcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLV--RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLV--rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|-+|-.+-.....|.+. ..+..|||..+ ++-+..+++.+- .+--+..+|+.-.. ...+|.+|+....+.++..
T Consensus 83 LD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 83 VDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA--SFLKADVVFLSPPWGGPDY 159 (241)
T ss_dssp EETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG--GGCCCSEEEECCCCSSGGG
T ss_pred EECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc--ccCCCCEEEECCCcCCcch
Confidence 67777777777777665 47888888653 333444443321 12224556764433 3569999998766666544
Q ss_pred --CCchhhhhc-ccCceEEEe
Q 038126 123 --KTLPELARV-SADGVVIFA 140 (169)
Q Consensus 123 --kTLPeLaRv-sadglVif~ 140 (169)
+.+.++.|+ ..+|++|+.
T Consensus 160 ~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 160 ATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp GGSSSBCTTTSCSSCHHHHHH
T ss_pred hhhHHHHHHhhcCCcceeHHH
Confidence 577788875 556665543
No 149
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=49.78 E-value=17 Score=28.71 Aligned_cols=91 Identities=13% Similarity=0.054 Sum_probs=57.3
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHH-hc-----ceeeeeecC---cccccCCceeEEEec
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVR-KG-----IVQATDIKF---PLAFRAKSFSLAIVS 114 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVr-KG-----iVRvADIkf---pLPYR~KSFSlViVS 114 (169)
+.|-||-.|-.....|++.- ..+.-|++ +.++-...+...+ .| -+...|+-- |+| .+|.+|+.+
T Consensus 182 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D---~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p---~~~D~v~~~ 255 (363)
T 3dp7_A 182 RLLDIGGNTGKWATQCVQYNKEVEVTIVD---LPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP---TGFDAVWMS 255 (363)
T ss_dssp EEEEESCTTCHHHHHHHHHSTTCEEEEEE---CHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC---CCCSEEEEE
T ss_pred EEEEeCCCcCHHHHHHHHhCCCCEEEEEe---CHHHHHHHHHHHHhcCcccceEEEEccccccCCCCC---CCcCEEEEe
Confidence 34778888877777777653 34555555 3443344443332 22 234456654 355 789999999
Q ss_pred ccccccCC----CCchhhhhc-ccCceEEEec
Q 038126 115 DAVDYLSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 115 DalDyLsp----kTLPeLaRv-sadglVif~G 141 (169)
.+|.++++ +.|-++.|+ ..+|.+++.-
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99998886 446677764 5678777644
No 150
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=49.45 E-value=4.4 Score=29.04 Aligned_cols=90 Identities=11% Similarity=0.056 Sum_probs=51.4
Q ss_pred hhccCCCchhhhhhhhcc--cccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccc--cCCceeEEEecccccc
Q 038126 46 RTGRDPETCSVVCKLLKE--EDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAF--RAKSFSLAIVSDAVDY 119 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkE--e~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPY--R~KSFSlViVSDalDy 119 (169)
.|-+|..+-.....|.+. ......|||+.+ ++.+..+++.. ..=-+..+|+.-+..+ -..+|.+|+ +|..
T Consensus 77 vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~-~~~~-- 152 (227)
T 1g8a_A 77 VLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIF-EDVA-- 152 (227)
T ss_dssp EEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEE-ECCC--
T ss_pred EEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEE-ECCC--
Confidence 367777776665556554 246788887654 23444454433 1112345677654322 135899988 4543
Q ss_pred cCC---CC-chhhhhc-ccCceEEEe
Q 038126 120 LSP---KT-LPELARV-SADGVVIFA 140 (169)
Q Consensus 120 Lsp---kT-LPeLaRv-sadglVif~ 140 (169)
.| +. +.++.|+ ..+|.++++
T Consensus 153 -~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 -QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp -STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 34 23 6777765 556777776
No 151
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=48.81 E-value=27 Score=25.85 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=58.6
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHh--cceeeeeecCccc-ccCCceeEEEecccc--
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRK--GIVQATDIKFPLA-FRAKSFSLAIVSDAV-- 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrK--GiVRvADIkfpLP-YR~KSFSlViVSDal-- 117 (169)
+.|-+|-.+-.+...|.+....+..|||.-+ ++-+..|.+..--. --+..+|+.-..+ +...+|++||..--.
T Consensus 52 ~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~ 131 (259)
T 3lpm_A 52 KIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFA 131 (259)
T ss_dssp EEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC--
T ss_pred EEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCC
Confidence 4466777776665555655445788887643 33344444322111 2244567754443 457899999873211
Q ss_pred ----cccCC----------------CCchhhhh-cccCceEEEecCCcchhhhhhhhhhcC
Q 038126 118 ----DYLSP----------------KTLPELAR-VSADGVVIFAGYPHQQRAKVSELSKFG 157 (169)
Q Consensus 118 ----DyLsp----------------kTLPeLaR-vsadglVif~G~Pgqqrakvaelskfg 157 (169)
...+| .-+.++.| +..+|.+++.-.|.+...-...+.+.|
T Consensus 132 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 132 TPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYR 192 (259)
T ss_dssp ---------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTT
T ss_pred CccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCC
Confidence 11111 12233333 456788888765655543334444443
No 152
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=48.71 E-value=21 Score=28.40 Aligned_cols=88 Identities=14% Similarity=0.105 Sum_probs=50.4
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHH-hcc-----eeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVR-KGI-----VQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVr-KGi-----VRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-+|-.|-.+...|.+....+..|||+.++ -..++..++ .|+ +..+|+. .+|+...+|++||.....-+|
T Consensus 69 LDiGcGtG~ls~~la~~g~~~v~gvD~s~~---~~~a~~~~~~~~~~~~i~~~~~d~~-~~~~~~~~~D~Ivs~~~~~~l 144 (340)
T 2fyt_A 69 LDVGCGTGILSMFAAKAGAKKVLGVDQSEI---LYQAMDIIRLNKLEDTITLIKGKIE-EVHLPVEKVDVIISEWMGYFL 144 (340)
T ss_dssp EEETCTTSHHHHHHHHTTCSEEEEEESSTH---HHHHHHHHHHTTCTTTEEEEESCTT-TSCCSCSCEEEEEECCCBTTB
T ss_pred EEeeccCcHHHHHHHHcCCCEEEEEChHHH---HHHHHHHHHHcCCCCcEEEEEeeHH-HhcCCCCcEEEEEEcCchhhc
Confidence 778888877766666665568999998753 233333332 232 3345553 234556789998865432223
Q ss_pred CC-----CCchhhhh-cccCceEE
Q 038126 121 SP-----KTLPELAR-VSADGVVI 138 (169)
Q Consensus 121 sp-----kTLPeLaR-vsadglVi 138 (169)
.. ..|-++.| +..+|++|
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 145 LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 22 23333444 45677776
No 153
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=45.78 E-value=6.2 Score=30.78 Aligned_cols=88 Identities=7% Similarity=-0.019 Sum_probs=56.2
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHHhc-ceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVRKG-IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVrKG-iVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
+.|.||-.+-.....|++.- ..+.-|++. .++-...+.+ .+ -+...|+.-++| .|.+|+.++.|.+++.
T Consensus 191 ~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~--~~v~~~~~d~~~~~p----~~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 191 SIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSGS--NNLTYVGGDMFTSIP----NADAVLLKYILHNWTD 261 (352)
T ss_dssp EEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCB--TTEEEEECCTTTCCC----CCSEEEEESCGGGSCH
T ss_pred eEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhcccC--CCcEEEeccccCCCC----CccEEEeehhhccCCH
Confidence 44888888888887777653 345556554 2322222221 22 123456633666 3999999999999976
Q ss_pred ----CCchhhhhcc-c---CceEEEec
Q 038126 123 ----KTLPELARVS-A---DGVVIFAG 141 (169)
Q Consensus 123 ----kTLPeLaRvs-a---dglVif~G 141 (169)
+.|-++.|+- . +|.+++.-
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 6677788764 4 68777664
No 154
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=44.84 E-value=27 Score=26.76 Aligned_cols=93 Identities=8% Similarity=0.157 Sum_probs=56.7
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHH-hcc---ee--eeeecCcccccCCceeEEEeccccc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVR-KGI---VQ--ATDIKFPLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVr-KGi---VR--vADIkfpLPYR~KSFSlViVSDalD 118 (169)
.|.||-.+-.....|++.- ..+..|++. .+.-...+.... .|+ |+ ..|+.-+.++-+++|.+|+.++.|.
T Consensus 183 vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh 259 (352)
T 3mcz_A 183 VIDLAGGHGTYLAQVLRRHPQLTGQIWDL---PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLH 259 (352)
T ss_dssp EEEETCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGG
T ss_pred EEEeCCCcCHHHHHHHHhCCCCeEEEEEC---HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccc
Confidence 3777888877777777653 346666644 333333333332 232 33 3454433323457799999999999
Q ss_pred ccCC----CCchhhhhc-ccCceEEEec
Q 038126 119 YLSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 119 yLsp----kTLPeLaRv-sadglVif~G 141 (169)
++++ +.|-++.|+ ..+|.+++.-
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 260 YFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9986 566666664 4567666653
No 155
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=44.57 E-value=11 Score=26.35 Aligned_cols=105 Identities=17% Similarity=0.006 Sum_probs=53.5
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC--
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP-- 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp-- 122 (169)
|-+|..+..+...|.+....+..|||..+ ++.+..+.+..--+--+..+|+.- +| .+|.+||..-.....+.
T Consensus 54 lD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~~~~~ 129 (207)
T 1wy7_A 54 ADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FN---SRVDIVIMNPPFGSQRKHA 129 (207)
T ss_dssp EEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CC---CCCSEEEECCCCSSSSTTT
T ss_pred EEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cC---CCCCEEEEcCCCccccCCc
Confidence 67777777776666666445688888642 222333332210011234456543 33 48998886544443332
Q ss_pred --CCchhhhhcccCceEEEec--CCcchhhhhhhhhhcC
Q 038126 123 --KTLPELARVSADGVVIFAG--YPHQQRAKVSELSKFG 157 (169)
Q Consensus 123 --kTLPeLaRvsadglVif~G--~Pgqqrakvaelskfg 157 (169)
+.|-++.|+. |.+...- .|+....-.+.+.+.|
T Consensus 130 ~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g 166 (207)
T 1wy7_A 130 DRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHG 166 (207)
T ss_dssp THHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCC
Confidence 3455667776 4433333 3443322223345555
No 156
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=43.07 E-value=13 Score=29.07 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=53.7
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHHhc-----ceeeeeecCcccccCCceeEEEeccccccc
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVRKG-----IVQATDIKFPLAFRAKSFSLAIVSDAVDYL 120 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVrKG-----iVRvADIkfpLPYR~KSFSlViVSDalDyL 120 (169)
|-||-.+-.....|++.- +....|++. ...-. -+.+-+.| -+...|+--++| +|.+|+.+++|.++
T Consensus 189 LDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~-~~~~~~~~~~~~v~~~~~d~~~~~p----~~D~v~~~~vlh~~ 260 (348)
T 3lst_A 189 ADVGGGRGGFLLTVLREHPGLQGVLLDR---AEVVA-RHRLDAPDVAGRWKVVEGDFLREVP----HADVHVLKRILHNW 260 (348)
T ss_dssp EEETCTTSHHHHHHHHHCTTEEEEEEEC---HHHHT-TCCCCCGGGTTSEEEEECCTTTCCC----CCSEEEEESCGGGS
T ss_pred EEECCccCHHHHHHHHHCCCCEEEEecC---HHHhh-cccccccCCCCCeEEEecCCCCCCC----CCcEEEEehhccCC
Confidence 777888877777777643 334555544 22111 01111112 234567755777 89999999999998
Q ss_pred CC----CCchhhhhcc-cCceEEEec
Q 038126 121 SP----KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 121 sp----kTLPeLaRvs-adglVif~G 141 (169)
++ +.|-++.|+= .+|.+++.-
T Consensus 261 ~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 261 GDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp CHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 86 5677777764 567776643
No 157
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=42.26 E-value=10 Score=31.87 Aligned_cols=100 Identities=16% Similarity=0.101 Sum_probs=59.5
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcc---eeeeeecCcccccCCceeEEEecccccccC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGI---VQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGi---VRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
|-+|-.+-.+-..|.+ ...+..|||..+ ++.+..|.+. .|+ +..+|+.-.++- +|++||+----.-+.
T Consensus 295 LDlgcG~G~~sl~la~-~~~~V~gvD~s~~ai~~A~~n~~~---ngl~v~~~~~d~~~~~~~---~fD~Vv~dPPr~g~~ 367 (425)
T 2jjq_A 295 LDMYSGVGTFGIYLAK-RGFNVKGFDSNEFAIEMARRNVEI---NNVDAEFEVASDREVSVK---GFDTVIVDPPRAGLH 367 (425)
T ss_dssp EEETCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHH---HTCCEEEEECCTTTCCCT---TCSEEEECCCTTCSC
T ss_pred EEeeccchHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEECChHHcCcc---CCCEEEEcCCccchH
Confidence 5555555555444544 456889998653 5566666543 343 445666544432 799888622111122
Q ss_pred CCCchhhhhcccCceEEEecCCcchhhhhhhh
Q 038126 122 PKTLPELARVSADGVVIFAGYPHQQRAKVSEL 153 (169)
Q Consensus 122 pkTLPeLaRvsadglVif~G~Pgqqrakvael 153 (169)
++.+..|.++..+|+|+++-.|...-...+.|
T Consensus 368 ~~~~~~l~~l~p~givyvsc~p~tlarDl~~l 399 (425)
T 2jjq_A 368 PRLVKRLNREKPGVIVYVSCNPETFARDVKML 399 (425)
T ss_dssp HHHHHHHHHHCCSEEEEEESCHHHHHHHHHHS
T ss_pred HHHHHHHHhcCCCcEEEEECChHHHHhHHhhC
Confidence 24567788889999999999997653333333
No 158
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=40.76 E-value=9.5 Score=29.55 Aligned_cols=93 Identities=13% Similarity=0.049 Sum_probs=54.5
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHH---------hcceeeeeecCcccccCCceeEEEecc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVR---------KGIVQATDIKFPLAFRAKSFSLAIVSD 115 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVr---------KGiVRvADIkfpLPYR~KSFSlViVSD 115 (169)
.|.+|-.+..+...+++.. ..+.-+||.-+ ++-..|+.-.. +=-+.++|..-.++....+|.+||+ |
T Consensus 82 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~-d 158 (283)
T 2i7c_A 82 VLVVGGGDGGIIRELCKYKSVENIDICEIDE--TVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV-D 158 (283)
T ss_dssp EEEEECTTSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE-E
T ss_pred EEEEeCCcCHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE-c
Confidence 3788999999999988763 35666666432 12223333221 1124566765444444678999886 6
Q ss_pred cccccCC-------CCchhhhh-cccCceEEEec
Q 038126 116 AVDYLSP-------KTLPELAR-VSADGVVIFAG 141 (169)
Q Consensus 116 alDyLsp-------kTLPeLaR-vsadglVif~G 141 (169)
..+...| ..+-++.| +..+|++++..
T Consensus 159 ~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 159 SSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 6554443 22233333 56788888764
No 159
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=39.98 E-value=14 Score=29.08 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=58.1
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhc-------ceeeeee-------cCcccccCCce
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKG-------IVQATDI-------KFPLAFRAKSF 108 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKG-------iVRvADI-------kfpLPYR~KSF 108 (169)
+.|-+|=.|-....++++....+..||++.+ ++.|....+..-.+. -.+++|+ .++-++-..+|
T Consensus 51 ~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~F 130 (302)
T 2vdw_A 51 KVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKF 130 (302)
T ss_dssp EEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCE
T ss_pred eEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCe
Confidence 3466666665566677776666788887764 344444443321000 1245666 12223446799
Q ss_pred eEEEeccccccc-CC----CCchhhhhcc-cCceEEEec
Q 038126 109 SLAIVSDAVDYL-SP----KTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 109 SlViVSDalDyL-sp----kTLPeLaRvs-adglVif~G 141 (169)
.+|+...+|-|+ .+ +.|-+++|+= ..|++|++-
T Consensus 131 D~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 131 NIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp EEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999999999886 32 6778888864 456666554
No 160
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=39.45 E-value=28 Score=28.62 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=57.5
Q ss_pred hhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 46 RTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
.|-+|-.+-.+...|.+. ..+..|||.-+ ++.+..|.+..--..-+..+|+.-. +....+|++||....+.+...
T Consensus 237 VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~-~~~~~~fD~Ii~npp~~~~~~~ 314 (381)
T 3dmg_A 237 VLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA-LTEEARFDIIVTNPPFHVGGAV 314 (381)
T ss_dssp EEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT-SCTTCCEEEEEECCCCCTTCSS
T ss_pred EEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc-cccCCCeEEEEECCchhhcccc
Confidence 366677776666666655 56888887643 2334444433221233556776433 334679999998766655222
Q ss_pred ------CCchhhhh-cccCceEEEecCCcc
Q 038126 123 ------KTLPELAR-VSADGVVIFAGYPHQ 145 (169)
Q Consensus 123 ------kTLPeLaR-vsadglVif~G~Pgq 145 (169)
..+.++.| +..+|.+++...+..
T Consensus 315 ~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l 344 (381)
T 3dmg_A 315 ILDVAQAFVNVAAARLRPGGVFFLVSNPFL 344 (381)
T ss_dssp CCHHHHHHHHHHHHHEEEEEEEEEEECTTS
T ss_pred cHHHHHHHHHHHHHhcCcCcEEEEEEcCCC
Confidence 22333333 577889999876653
No 161
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=38.74 E-value=19 Score=28.74 Aligned_cols=92 Identities=9% Similarity=-0.094 Sum_probs=49.6
Q ss_pred hccCCCchhhhhhhhcccc-cccccccc--cCCchhhHHHHHHHHhcc----eeeeeecCcccc-cCCceeEEEeccccc
Q 038126 47 TGRDPETCSVVCKLLKEED-NEAWGVEP--FDSDDADANRMSLVRKGI----VQATDIKFPLAF-RAKSFSLAIVSDAVD 118 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~-tEAWGVEP--yd~edad~~CksLVrKGi----VRvADIkfpLPY-R~KSFSlViVSDalD 118 (169)
|-+| .|-.+.-.|.+... .++.|||. --++-+..|.+. .|+ +..+|+.-+||. -..+|.+||+.-..-
T Consensus 177 LDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~---~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~ 252 (373)
T 2qm3_A 177 FVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANE---IGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPET 252 (373)
T ss_dssp EEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH---HTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSS
T ss_pred EEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH---cCCCCEEEEEChhhhhchhhccCCccEEEECCCCc
Confidence 5667 76665555554433 57888874 233445555443 354 455788767875 356899998642110
Q ss_pred cc-CCCCchhhhhccc-Cc-eEEEecC
Q 038126 119 YL-SPKTLPELARVSA-DG-VVIFAGY 142 (169)
Q Consensus 119 yL-spkTLPeLaRvsa-dg-lVif~G~ 142 (169)
.. -.+-|.+..|+-. +| +++|.=.
T Consensus 253 ~~~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 253 LEAIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp HHHHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred hHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 00 0133445566554 47 4455433
No 162
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=38.72 E-value=8.5 Score=26.32 Aligned_cols=67 Identities=10% Similarity=-0.114 Sum_probs=32.9
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhcceeeeeecCcccc---cCCceeEEEe
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAF---RAKSFSLAIV 113 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPY---R~KSFSlViV 113 (169)
|-+|-.|-.....|++.- ..+..|||..+ ++-+..+.+..-.+--+..+|+.-+++- ...+|++|+.
T Consensus 35 LDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 35 IDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp EEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred EEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 667777777766666654 45788888643 3445444443211122444566554432 2389999987
No 163
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=38.72 E-value=34 Score=24.82 Aligned_cols=52 Identities=10% Similarity=0.033 Sum_probs=41.0
Q ss_pred hhhhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeee
Q 038126 43 VRVRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDI 97 (169)
Q Consensus 43 v~~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADI 97 (169)
|+..|.-||-+=+=+.+.+++.-...|++.+ -..-..-+.|.++|+|.....
T Consensus 7 iL~lL~~~~~~gyel~~~l~~~~~~~~~~s~---~~ly~~L~~Le~~GlI~~~~~ 58 (179)
T 1yg2_A 7 ILTVLSTRDATGYDITKEFSASIGYFWKASH---QQVYRELNKMGEQGLVTCVLE 58 (179)
T ss_dssp HHHHHHHCCBCHHHHHHHHTTGGGGTCCCCH---HHHHHHHHHHHHTTSEEECCC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHhCCccCCCc---CcHHHHHHHHHHCCCeEEEee
Confidence 4556777998888888888877777887766 456778899999999987654
No 164
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=38.64 E-value=11 Score=27.47 Aligned_cols=108 Identities=14% Similarity=0.155 Sum_probs=59.9
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhcc--ee--eeeecCccc--ccCCceeEEEeccc
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKGI--VQ--ATDIKFPLA--FRAKSFSLAIVSDA 116 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKGi--VR--vADIkfpLP--YR~KSFSlViVSDa 116 (169)
.|-+|-.+-.+...|.+.- +....|||..+ ++-+..+. .+.|+ |+ .+|+.- || +...+|+.|++.-.
T Consensus 42 vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~---~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 42 HIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKV---KDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp EEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH---HHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEESC
T ss_pred EEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHH---HHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEECC
Confidence 4778888877777776653 56788988764 22232222 22343 33 356543 33 55678998875311
Q ss_pred cccc----------CCCCchhhhh-cccCceEEEec-CCcchhhhhhhhhhcC
Q 038126 117 VDYL----------SPKTLPELAR-VSADGVVIFAG-YPHQQRAKVSELSKFG 157 (169)
Q Consensus 117 lDyL----------spkTLPeLaR-vsadglVif~G-~Pgqqrakvaelskfg 157 (169)
..+. .+..|.+++| +..+|.++|.. .+.+...-.+.+.+.|
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g 170 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG 170 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 1111 1123566676 46778888765 5444444445555544
No 165
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=38.44 E-value=12 Score=29.23 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=50.4
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHH---Hh------cceeeeeecC-cccccCCceeEEEecc
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLV---RK------GIVQATDIKF-PLAFRAKSFSLAIVSD 115 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLV---rK------GiVRvADIkf-pLPYR~KSFSlViVSD 115 (169)
|.+|-.+..+...|++.. ..+..|||.-+ ++-..|+.-. .+ =-+.++|+.- +......+|.+||+ |
T Consensus 100 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~--~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~-d 176 (304)
T 3bwc_A 100 LIIGGGDGGVLREVLRHGTVEHCDLVDIDG--EVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII-D 176 (304)
T ss_dssp EEEECTTSHHHHHHHTCTTCCEEEEEESCH--HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE-E
T ss_pred EEEcCCCCHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE-C
Confidence 778999999988888763 45777777542 1222222222 11 1245566532 22123678999886 6
Q ss_pred cccccCC-------CCchhhhh-cccCceEEEec
Q 038126 116 AVDYLSP-------KTLPELAR-VSADGVVIFAG 141 (169)
Q Consensus 116 alDyLsp-------kTLPeLaR-vsadglVif~G 141 (169)
..+...| ..+-++.| +..+|++++..
T Consensus 177 ~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 177 TTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp CC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 6665544 22445554 45678877754
No 166
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=37.28 E-value=18 Score=27.18 Aligned_cols=112 Identities=15% Similarity=0.064 Sum_probs=64.5
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHH---hcc--e--eeeeecCccc--ccCCceeEEEe
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVR---KGI--V--QATDIKFPLA--FRAKSFSLAIV 113 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVr---KGi--V--RvADIkfpLP--YR~KSFSlViV 113 (169)
.|-||-.+-.....|.+.- +....|||+.+ ++-|..+.+.|-+ .++ | ..+|+.-.|| +...+|+.|++
T Consensus 50 vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~ 129 (235)
T 3ckk_A 50 FADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFF 129 (235)
T ss_dssp EEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEE
T ss_pred EEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEE
Confidence 3778888877777776653 56789999864 3345566665421 222 3 3467765566 67889999875
Q ss_pred cccccccC----------CCCchhhhhc-ccCceEEEe-cCCcchhhhhhhhhhcC
Q 038126 114 SDAVDYLS----------PKTLPELARV-SADGVVIFA-GYPHQQRAKVSELSKFG 157 (169)
Q Consensus 114 SDalDyLs----------pkTLPeLaRv-sadglVif~-G~Pgqqrakvaelskfg 157 (169)
.=...+.. +..|-+++|+ ..+|.++|+ ..+.....-...+.+.|
T Consensus 130 ~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 130 LFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp ESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 31111111 1256667775 456777775 34444444444455544
No 167
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=37.06 E-value=61 Score=25.12 Aligned_cols=89 Identities=10% Similarity=0.034 Sum_probs=54.4
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHH-Hhcc---ee--eeeecCcccccCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLV-RKGI---VQ--ATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLV-rKGi---VR--vADIkfpLPYR~KSFSlViVSDalDy 119 (169)
|.||-.+-.....|++.- +.+..|++. +++-..++... +.|+ |+ ..|+.- +|+. .+.+|+.+..|.+
T Consensus 195 LDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~--~~D~v~~~~vlh~ 268 (359)
T 1x19_A 195 IDVGGGIGDISAAMLKHFPELDSTILNL---PGAIDLVNENAAEKGVADRMRGIAVDIYK-ESYP--EADAVLFCRILYS 268 (359)
T ss_dssp EEESCTTCHHHHHHHHHCTTCEEEEEEC---GGGHHHHHHHHHHTTCTTTEEEEECCTTT-SCCC--CCSEEEEESCGGG
T ss_pred EEECCcccHHHHHHHHHCCCCeEEEEec---HHHHHHHHHHHHhcCCCCCEEEEeCcccc-CCCC--CCCEEEEechhcc
Confidence 778888887777777653 446677765 33333333322 2232 33 455532 2443 3499999999999
Q ss_pred cCC----CCchhhhhc-ccCceEEEec
Q 038126 120 LSP----KTLPELARV-SADGVVIFAG 141 (169)
Q Consensus 120 Lsp----kTLPeLaRv-sadglVif~G 141 (169)
+++ +.|-++.|+ ..+|.+++.-
T Consensus 269 ~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 269 ANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp SCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 875 556677765 4567776554
No 168
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=36.83 E-value=9.9 Score=27.36 Aligned_cols=93 Identities=9% Similarity=-0.009 Sum_probs=50.5
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHH--hcceeeeeecCccccc--CCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVR--KGIVQATDIKFPLAFR--AKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVr--KGiVRvADIkfpLPYR--~KSFSlViVSDalDy 119 (169)
|-+|-.+-.....|.+.- ..+..|+|+.+ ++-+..+.+.+-- +=-+...|+.-.+|.- ..+|.+|++.....
T Consensus 59 LdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~- 137 (233)
T 2gpy_A 59 LEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG- 137 (233)
T ss_dssp EEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS-
T ss_pred EEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH-
Confidence 667777666555555442 56788887643 2233333332211 1123445665555654 57899998755432
Q ss_pred cCCCCchhhhh-cccCceEEEe
Q 038126 120 LSPKTLPELAR-VSADGVVIFA 140 (169)
Q Consensus 120 LspkTLPeLaR-vsadglVif~ 140 (169)
-.++.|.++.| +..+|++++.
T Consensus 138 ~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 138 QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEE
Confidence 11244455555 4567888875
No 169
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=36.72 E-value=18 Score=29.51 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=48.4
Q ss_pred hccCCCchhhhhhhhcccccccccccccC-CchhhHHHHHHHH-hccee--eeeecC----cccccCCceeEEEeccccc
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD-SDDADANRMSLVR-KGIVQ--ATDIKF----PLAFRAKSFSLAIVSDAVD 118 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd-~edad~~CksLVr-KGiVR--vADIkf----pLPYR~KSFSlViVSDalD 118 (169)
|-+|-.|-..-..|++....+..||+.-. |=+.. +-+ ..++. ..||.. .||. .+|.+|++.-++-
T Consensus 90 LDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a-----~r~~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 90 IDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWK-----LRQDDRVRSMEQYNFRYAEPVDFTE--GLPSFASIDVSFI 162 (291)
T ss_dssp EEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHH-----HHTCTTEEEECSCCGGGCCGGGCTT--CCCSEEEECCSSS
T ss_pred EecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhCcccceecccCceecchhhCCC--CCCCEEEEEeeHh
Confidence 66777777777777777667899998843 33221 100 11111 112211 1332 3699887533332
Q ss_pred ccCCCCchhhhhccc-CceEEEe
Q 038126 119 YLSPKTLPELARVSA-DGVVIFA 140 (169)
Q Consensus 119 yLspkTLPeLaRvsa-dglVif~ 140 (169)
.| ++.|||+.|+-. .|.+++.
T Consensus 163 sl-~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 163 SL-NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CG-GGTHHHHHHHSCTTCEEEEE
T ss_pred hH-HHHHHHHHHHcCcCCEEEEE
Confidence 22 489999999765 4566555
No 170
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=36.11 E-value=15 Score=28.57 Aligned_cols=89 Identities=18% Similarity=0.249 Sum_probs=46.0
Q ss_pred ccCCCc-hhhhhhhhcccccccccccccCC--chhhHHHHHHHHhcc-eeeeeecCccccc--CCceeEEEecccccccC
Q 038126 48 GRDPET-CSVVCKLLKEEDNEAWGVEPFDS--DDADANRMSLVRKGI-VQATDIKFPLAFR--AKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 48 HvGPdT-C~VVskLLkEe~tEAWGVEPyd~--edad~~CksLVrKGi-VRvADIkfpLPYR--~KSFSlViVSDalDyLs 121 (169)
+-||.+ ...+++++. .+....|||..+- ++.-...+. +.++ ...+|+..|.+|+ ..+|++|+ +|+..-..
T Consensus 84 G~GtG~~t~~la~~v~-~~G~V~avD~s~~~l~~l~~~a~~--r~nv~~i~~Da~~~~~~~~~~~~~D~I~-~d~a~~~~ 159 (232)
T 3id6_C 84 GAASGTTISHVSDIIE-LNGKAYGVEFSPRVVRELLLVAQR--RPNIFPLLADARFPQSYKSVVENVDVLY-VDIAQPDQ 159 (232)
T ss_dssp TCTTSHHHHHHHHHHT-TTSEEEEEECCHHHHHHHHHHHHH--CTTEEEEECCTTCGGGTTTTCCCEEEEE-ECCCCTTH
T ss_pred eecCCHHHHHHHHHhC-CCCEEEEEECcHHHHHHHHHHhhh--cCCeEEEEcccccchhhhccccceEEEE-ecCCChhH
Confidence 334443 223344442 3568899987652 122222221 1222 3468888777665 36899876 45432000
Q ss_pred CCCchhhhh--cccCceEEEe
Q 038126 122 PKTLPELAR--VSADGVVIFA 140 (169)
Q Consensus 122 pkTLPeLaR--vsadglVif~ 140 (169)
++.|.+.++ +..+|.++++
T Consensus 160 ~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 160 TDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEE
Confidence 023333444 6778888876
No 171
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=36.06 E-value=39 Score=25.72 Aligned_cols=91 Identities=5% Similarity=-0.066 Sum_probs=51.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhc-c-eeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKG-I-VQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKG-i-VRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|-+|-.|...--.+.+....+..|||..+ ++.+..|.+..--.. + +..+|+.-.++ ..+|.+||. |.. +-..
T Consensus 130 LDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~-~~p-~~~~ 205 (278)
T 2frn_A 130 VDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM-GYV-VRTH 205 (278)
T ss_dssp EETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE-CCC-SSGG
T ss_pred EEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--cCCccEEEE-CCc-hhHH
Confidence 55666666555555554444688887643 455666655321112 2 45677755444 778999976 322 1112
Q ss_pred CCchhhhhccc-CceEEEec
Q 038126 123 KTLPELARVSA-DGVVIFAG 141 (169)
Q Consensus 123 kTLPeLaRvsa-dglVif~G 141 (169)
+.++++.|+-. +|++++..
T Consensus 206 ~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 206 EFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp GGHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHCCCCeEEEEEE
Confidence 66777777654 56666644
No 172
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=34.97 E-value=56 Score=26.40 Aligned_cols=95 Identities=17% Similarity=0.049 Sum_probs=54.8
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHH---hcc------eeeeeecCccc-ccCCceeEEEec
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVR---KGI------VQATDIKFPLA-FRAKSFSLAIVS 114 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVr---KGi------VRvADIkfpLP-YR~KSFSlViVS 114 (169)
.|.+|-.+..+...|++.. ..+..+||..+ ++-..|+.-.. .|+ +..+|..-.|+ +...+|.+||+
T Consensus 124 VLdIG~G~G~~a~~la~~~~~~~V~~VDis~--~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~- 200 (334)
T 1xj5_A 124 VLVIGGGDGGVLREVARHASIEQIDMCEIDK--MVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV- 200 (334)
T ss_dssp EEEETCSSSHHHHHHTTCTTCCEEEEEESCH--HHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE-
T ss_pred EEEECCCccHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE-
Confidence 3888999999988888763 45677777543 12223332222 132 44566543333 23578998875
Q ss_pred ccccccCC-------CCchhhhh-cccCceEEEe-cCC
Q 038126 115 DAVDYLSP-------KTLPELAR-VSADGVVIFA-GYP 143 (169)
Q Consensus 115 DalDyLsp-------kTLPeLaR-vsadglVif~-G~P 143 (169)
|..+...+ ..+.++.| +..+|++++. +.|
T Consensus 201 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 201 DSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp CCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred CCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 55543322 33444444 4678888885 444
No 173
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=34.33 E-value=48 Score=26.18 Aligned_cols=88 Identities=9% Similarity=0.100 Sum_probs=54.0
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHH-HHhcc---ee--eeeecCcccccCCceeEEEecccccc
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSL-VRKGI---VQ--ATDIKFPLAFRAKSFSLAIVSDAVDY 119 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksL-VrKGi---VR--vADIkfpLPYR~KSFSlViVSDalDy 119 (169)
|-||-.+-.....|++.- ..+.-|+ |+.++-...+.. .+.|+ |+ ..|+.-|+|- +|.+|+.+++|.|
T Consensus 207 lDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~---~~D~v~~~~vlh~ 280 (369)
T 3gwz_A 207 VDIGGGRGSLMAAVLDAFPGLRGTLL---ERPPVAEEARELLTGRGLADRCEILPGDFFETIPD---GADVYLIKHVLHD 280 (369)
T ss_dssp EEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS---SCSEEEEESCGGG
T ss_pred EEeCCCccHHHHHHHHHCCCCeEEEE---cCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC---CceEEEhhhhhcc
Confidence 667777766766776652 3344444 444433333332 33343 44 4565545553 8999999999999
Q ss_pred cCC----CCchhhhhcc-cCceEEEe
Q 038126 120 LSP----KTLPELARVS-ADGVVIFA 140 (169)
Q Consensus 120 Lsp----kTLPeLaRvs-adglVif~ 140 (169)
++. +.|-++.|+- .+|.+++.
T Consensus 281 ~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 281 WDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp SCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 986 4677777754 46766664
No 174
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=32.61 E-value=33 Score=25.78 Aligned_cols=69 Identities=10% Similarity=-0.020 Sum_probs=38.3
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHHhc-----ceeeeeecCccc------ccCCceeEE
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVRKG-----IVQATDIKFPLA------FRAKSFSLA 111 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVrKG-----iVRvADIkfpLP------YR~KSFSlV 111 (169)
.|-+|-.|-.+.-.|.+.- ..+..|||.-+ ++-+..|.+.+-..| -+..+|+.-.++ +...+|++|
T Consensus 40 VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~V 119 (260)
T 2ozv_A 40 IADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHV 119 (260)
T ss_dssp EEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEE
T ss_pred EEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEE
Confidence 3666766665554454443 45778887643 233444443311022 345577765533 557899998
Q ss_pred Eec
Q 038126 112 IVS 114 (169)
Q Consensus 112 iVS 114 (169)
|..
T Consensus 120 v~n 122 (260)
T 2ozv_A 120 IMN 122 (260)
T ss_dssp EEC
T ss_pred EEC
Confidence 874
No 175
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=32.50 E-value=51 Score=26.87 Aligned_cols=99 Identities=8% Similarity=0.017 Sum_probs=59.3
Q ss_pred hhhccCCCchhhhhhhhccc-ccccccccccC--CchhhHHHHHHHH--hcce--eeeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEE-DNEAWGVEPFD--SDDADANRMSLVR--KGIV--QATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd--~edad~~CksLVr--KGiV--RvADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|-+|-.+..+-..|.+.. ..+..|||..+ ++-+..|.+..-- +..| ..+|+--++ ...+|.+||....+
T Consensus 225 ~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 225 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--EPFRFNAVLCNPPF 302 (375)
T ss_dssp EEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--CTTCEEEEEECCCC
T ss_pred eEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--CCCCeeEEEECCCc
Confidence 34778888888777777664 67888988753 2333444332210 1124 556765544 46789999876554
Q ss_pred ccc---CC----CCchhhhh-cccCceEEEecCCcc
Q 038126 118 DYL---SP----KTLPELAR-VSADGVVIFAGYPHQ 145 (169)
Q Consensus 118 DyL---sp----kTLPeLaR-vsadglVif~G~Pgq 145 (169)
... .. +-+.++.| +..+|.+++.++..+
T Consensus 303 h~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 303 HQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp -------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred ccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 321 11 23567776 588999999875443
No 176
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=32.45 E-value=14 Score=29.06 Aligned_cols=86 Identities=13% Similarity=0.044 Sum_probs=52.7
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCCchhhHHHHHHHHhc-ceeeeeecCcccccCCceeEEEecccccccCC-
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDSDDADANRMSLVRKG-IVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP- 122 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~edad~~CksLVrKG-iVRvADIkfpLPYR~KSFSlViVSDalDyLsp- 122 (169)
.|.||-.+-.....|++.- +.+..|++ +...-..++.+ .+ -+...|+.-|+|- |.+|+.++.|.+++.
T Consensus 213 vLDvG~G~G~~~~~l~~~~~~~~~~~~D---~~~~~~~a~~~--~~v~~~~~d~~~~~~~----~D~v~~~~~lh~~~d~ 283 (372)
T 1fp1_D 213 LVDVGGGSGRNLELIISKYPLIKGINFD---LPQVIENAPPL--SGIEHVGGDMFASVPQ----GDAMILKAVCHNWSDE 283 (372)
T ss_dssp EEEETCTTSHHHHHHHHHCTTCEEEEEE---CHHHHTTCCCC--TTEEEEECCTTTCCCC----EEEEEEESSGGGSCHH
T ss_pred EEEeCCCCcHHHHHHHHHCCCCeEEEeC---hHHHHHhhhhc--CCCEEEeCCcccCCCC----CCEEEEecccccCCHH
Confidence 3777888877777777653 23444444 22222222221 22 1334566446652 999999999999876
Q ss_pred ---CCchhhhhc-ccCceEEEe
Q 038126 123 ---KTLPELARV-SADGVVIFA 140 (169)
Q Consensus 123 ---kTLPeLaRv-sadglVif~ 140 (169)
+.|-++.|+ ..+|.+++.
T Consensus 284 ~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 284 KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEE
Confidence 567788876 446777765
No 177
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=32.41 E-value=26 Score=28.33 Aligned_cols=93 Identities=16% Similarity=0.080 Sum_probs=46.8
Q ss_pred CCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcce-eeeeecCcccccCCceeEEEecccc---------cc
Q 038126 50 DPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIV-QATDIKFPLAFRAKSFSLAIVSDAV---------DY 119 (169)
Q Consensus 50 GPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiV-RvADIkfpLPYR~KSFSlViVSDal---------Dy 119 (169)
||.+ .+.++++. ...+..||+..+. +..=-+ ..+|+.- +|+. .+|.+|+ ||.. |+
T Consensus 79 GpGs-~~~a~~~~-~~~~V~gvDis~~----------v~~v~~~i~gD~~~-~~~~-~~fD~Vv-sn~~~~~~g~~~~d~ 143 (290)
T 2xyq_A 79 APGT-AVLRQWLP-TGTLLVDSDLNDF----------VSDADSTLIGDCAT-VHTA-NKWDLII-SDMYDPRTKHVTKEN 143 (290)
T ss_dssp CHHH-HHHHHHSC-TTCEEEEEESSCC----------BCSSSEEEESCGGG-CCCS-SCEEEEE-ECCCCCC---CCSCC
T ss_pred CcHH-HHHHHHcC-CCCEEEEEECCCC----------CCCCEEEEECcccc-CCcc-CcccEEE-EcCCccccccccccc
Confidence 3355 55555553 2457888877665 111112 3467642 3333 6799988 5532 22
Q ss_pred cCC-----CCchhhhhc-ccCceEEEecCCc-chhhhhhhhhhcC
Q 038126 120 LSP-----KTLPELARV-SADGVVIFAGYPH-QQRAKVSELSKFG 157 (169)
Q Consensus 120 Lsp-----kTLPeLaRv-sadglVif~G~Pg-qqrakvaelskfg 157 (169)
... ..|.+..|+ ...|.++|.-+-+ +...-...+.++|
T Consensus 144 ~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~G 188 (290)
T 2xyq_A 144 DSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFS 188 (290)
T ss_dssp CCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEE
T ss_pred cchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcC
Confidence 221 234455554 4667777755333 2223333455553
No 178
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=32.12 E-value=17 Score=31.17 Aligned_cols=92 Identities=11% Similarity=0.029 Sum_probs=53.4
Q ss_pred hccCCCchhhhhhhhccc-ccccccccccCC--chh-------hHHHHHHHH-hcceee--e-eecCcccc--cCCceeE
Q 038126 47 TGRDPETCSVVCKLLKEE-DNEAWGVEPFDS--DDA-------DANRMSLVR-KGIVQA--T-DIKFPLAF--RAKSFSL 110 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe-~tEAWGVEPyd~--eda-------d~~CksLVr-KGiVRv--A-DIkfpLPY--R~KSFSl 110 (169)
|-+|-.+-.+...|.+.- ..+++|||..+- +-| ..+++.+-- -+-|++ + |..-+.|+ -..+|++
T Consensus 247 LDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDv 326 (433)
T 1u2z_A 247 MDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDV 326 (433)
T ss_dssp EEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSE
T ss_pred EEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCE
Confidence 777777777777777653 347999997652 223 444443210 023433 2 33223333 2478999
Q ss_pred EEecccccccCC---CCchhhhhcccC-ceEEEe
Q 038126 111 AIVSDAVDYLSP---KTLPELARVSAD-GVVIFA 140 (169)
Q Consensus 111 ViVSDalDyLsp---kTLPeLaRvsad-glVif~ 140 (169)
|++++.+ + .+ ..|-++.|+-.. |.+++.
T Consensus 327 Ivvn~~l-~-~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 327 ILVNNFL-F-DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EEECCTT-C-CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred EEEeCcc-c-cccHHHHHHHHHHhCCCCeEEEEe
Confidence 9988776 2 23 456678887664 555555
No 179
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=29.78 E-value=27 Score=25.80 Aligned_cols=97 Identities=12% Similarity=0.096 Sum_probs=56.2
Q ss_pred hhccCCCchhhhhhhhccc-ccccccccccCC--chhhHHHHHHHHhcc--eee--eeecCccc--ccCCceeEEEec--
Q 038126 46 RTGRDPETCSVVCKLLKEE-DNEAWGVEPFDS--DDADANRMSLVRKGI--VQA--TDIKFPLA--FRAKSFSLAIVS-- 114 (169)
Q Consensus 46 aLHvGPdTC~VVskLLkEe-~tEAWGVEPyd~--edad~~CksLVrKGi--VRv--ADIkfpLP--YR~KSFSlViVS-- 114 (169)
.|-+|-.+-.....|.+.. +....|||++.- +.+..+. .+.|+ |++ +|+.-.|| +...||+.|++.
T Consensus 38 vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~---~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 38 TLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASA---HEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp EEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH---HHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred EEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHH---HHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 3667777766666666543 567899998742 2233333 23343 443 55544344 567899999875
Q ss_pred ccccc--------cCCCCchhhhh-cccCceEEEecCCcc
Q 038126 115 DAVDY--------LSPKTLPELAR-VSADGVVIFAGYPHQ 145 (169)
Q Consensus 115 DalDy--------LspkTLPeLaR-vsadglVif~G~Pgq 145 (169)
|-..- +.|..+.+++| +...|+++|+-.+.+
T Consensus 115 ~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 115 DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 32110 01125677777 677888888765443
No 180
>2bop_A Protein (E2); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 1.70A {Bovine papillomavirus type 1} SCOP: d.58.8.1 PDB: 1jjh_A
Probab=29.72 E-value=18 Score=25.52 Aligned_cols=33 Identities=12% Similarity=0.280 Sum_probs=25.2
Q ss_pred eEEEecCCcchhhhhhhhh-hcCCccccccCccc
Q 038126 136 VVIFAGYPHQQRAKVSELS-KFGRPAKLRSSTWW 168 (169)
Q Consensus 136 lVif~G~Pgqqrakvaels-kfgrpaK~rsssWW 168 (169)
||++-|-|.|.|-----+. |+-..-+.=|++||
T Consensus 3 vi~lkG~~N~LKC~RyRlk~k~~~lf~~~STTW~ 36 (85)
T 2bop_A 3 FALISGTANQVKCYRFRVKKNHRHRYENCTTTWF 36 (85)
T ss_dssp EEEEEECHHHHHHHHHHHHHHCGGGCSEECCCEE
T ss_pred EEEEEcCCccccChhhhchhccCCcceeEccEEE
Confidence 6788999999865555555 67777778899998
No 181
>1f9f_A Regulatory protein E2; dimeric beta barrel, activator, DNA-binding, trans-acting factor, transcription; 1.90A {Human papillomavirus type 18} SCOP: d.58.8.1 PDB: 1jj4_A
Probab=29.59 E-value=19 Score=25.27 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=26.4
Q ss_pred eEEEecCCcchhhhhhhhhhcCCccccccCcc-cC
Q 038126 136 VVIFAGYPHQQRAKVSELSKFGRPAKLRSSTW-WI 169 (169)
Q Consensus 136 lVif~G~PgqqrakvaelskfgrpaK~rsssW-W~ 169 (169)
||++-|-|.|.|-----+.|+-..-+.=|++| |+
T Consensus 7 vi~lkG~~N~LKC~RyRlkk~~~lf~~~STTW~W~ 41 (83)
T 1f9f_A 7 IIHLKGDRNSLKCLRYRLRKHSDHYRDISSTWHWT 41 (83)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHCCSCSEEBCCBCC-
T ss_pred EEEEEeCCccccchhhhhhccCCCeEEECceEEec
Confidence 78899999998765555557778888889999 85
No 182
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=28.81 E-value=46 Score=26.09 Aligned_cols=95 Identities=8% Similarity=-0.031 Sum_probs=57.8
Q ss_pred hhhccCCCchhhhhhhhcccc-cccccccccC--CchhhHHHHHHHHhcceeeeeecCcccccCCceeEEEecccccccC
Q 038126 45 VRTGRDPETCSVVCKLLKEED-NEAWGVEPFD--SDDADANRMSLVRKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLS 121 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~-tEAWGVEPyd--~edad~~CksLVrKGiVRvADIkfpLPYR~KSFSlViVSDalDyLs 121 (169)
+.|.+|-.+..+...|.+... .+..|||... ++-+..+++..--..-+..+|+- .. -..+|.+|+....+.+.-
T Consensus 199 ~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~-~~--~~~~fD~Iv~~~~~~~g~ 275 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVF-SE--VKGRFDMIISNPPFHDGM 275 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTT-TT--CCSCEEEEEECCCCCSSS
T ss_pred eEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccc-cc--ccCCeeEEEECCCcccCc
Confidence 348888888888777776643 4778887654 34444444432112234556652 22 267999999987765421
Q ss_pred -------CCCchhhhhc-ccCceEEEecC
Q 038126 122 -------PKTLPELARV-SADGVVIFAGY 142 (169)
Q Consensus 122 -------pkTLPeLaRv-sadglVif~G~ 142 (169)
.+-+-++.|+ ..+|.+++...
T Consensus 276 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 276 QTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 1445566664 56788888763
No 183
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=28.71 E-value=7.3 Score=29.60 Aligned_cols=90 Identities=13% Similarity=0.031 Sum_probs=50.3
Q ss_pred hhhccCCCchhhhhhhhcccccccccccccC--CchhhHHHHHHHHhc--cee---eeeecCcccccCCceeEEEecccc
Q 038126 45 VRTGRDPETCSVVCKLLKEEDNEAWGVEPFD--SDDADANRMSLVRKG--IVQ---ATDIKFPLAFRAKSFSLAIVSDAV 117 (169)
Q Consensus 45 ~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd--~edad~~CksLVrKG--iVR---vADIkfpLPYR~KSFSlViVSDal 117 (169)
+.|-+|-.|-.....|++....+..||++.+ ++-+-.+.......+ .++ ..|+..++ +...+|.+++.+
T Consensus 40 ~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~D~v~~~--- 115 (232)
T 3opn_A 40 TCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR-PSFTSIDVSFIS--- 115 (232)
T ss_dssp EEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC-CSEEEECCSSSC---
T ss_pred EEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC-CCEEEEEEEhhh---
Confidence 3488888888887788877556899998754 333333222111101 111 13333322 233455544332
Q ss_pred cccCCCCchhhhhcc-cCceEEEec
Q 038126 118 DYLSPKTLPELARVS-ADGVVIFAG 141 (169)
Q Consensus 118 DyLspkTLPeLaRvs-adglVif~G 141 (169)
| .+.|+++.|+- .+|.++|.-
T Consensus 116 --l-~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 116 --L-DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp --G-GGTHHHHHHHSCTTCEEEEEE
T ss_pred --H-HHHHHHHHHhccCCCEEEEEE
Confidence 2 68999999975 567777653
No 184
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=28.18 E-value=11 Score=27.17 Aligned_cols=51 Identities=22% Similarity=0.441 Sum_probs=28.3
Q ss_pred CcccccCCceeEEEecccccccCCCCchhhhhcc--cCceEEEecCCcchhhhhhhhhhc
Q 038126 99 FPLAFRAKSFSLAIVSDAVDYLSPKTLPELARVS--ADGVVIFAGYPHQQRAKVSELSKF 156 (169)
Q Consensus 99 fpLPYR~KSFSlViVSDalDyLspkTLPeLaRvs--adglVif~G~Pgqqrakvaelskf 156 (169)
-|+|||.=.|+ ++.||| +++||..++. .+|-+++-.-|.+.-+-+++|-+-
T Consensus 42 ~~iP~r~lGy~-----sl~~fL--~sipdvv~~~~~~~G~~~v~av~~~~t~HI~~lV~~ 94 (102)
T 3s93_A 42 NHLPLRILGYR-----STMELV--LDMPDVVRVCPGAGGTVILKAIPDESTKGIASLVAK 94 (102)
T ss_dssp SCCCTGGGTCS-----SHHHHH--HTCTTTEEEECCGGGCCEEEEC--------------
T ss_pred CcCCchhcCcC-----CHHHHH--HcCCCeEEEEecCCCCEEEEEEeCHHHHHHHHHHHh
Confidence 58999988874 667777 4899999764 457777777787777777777553
No 185
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=28.03 E-value=18 Score=25.91 Aligned_cols=65 Identities=17% Similarity=0.275 Sum_probs=39.3
Q ss_pred CchhhHHHHHHH--Hhcceeeeeec--------CcccccCCceeEEEecccccccCCCCchhhhhc--ccCceEEEecCC
Q 038126 76 SDDADANRMSLV--RKGIVQATDIK--------FPLAFRAKSFSLAIVSDAVDYLSPKTLPELARV--SADGVVIFAGYP 143 (169)
Q Consensus 76 ~edad~~CksLV--rKGiVRvADIk--------fpLPYR~KSFSlViVSDalDyLspkTLPeLaRv--sadglVif~G~P 143 (169)
+|++...=.||+ .||-|-+.+++ -|+|||.=-|+ ++.|+| +++||..++ +.+|-|+.-.-|
T Consensus 11 ~e~V~k~iRslL~S~k~gvtl~~L~~DYr~l~G~~iP~r~lGy~-----sl~~fL--~siPdvv~~~~~~~Gev~v~Av~ 83 (89)
T 3rco_A 11 GDLVSKMLRAVLQSHKNGVALPRLQGEYRSLTGDWIPFKQLGFP-----TLEAYL--RSVPAVVRIETSRSGEITCYAMA 83 (89)
T ss_dssp HHHHHHHHHHHHHTCTTCEEHHHHHHHHHHHHSSCCCTTTTTCS-----SHHHHH--HTCTTTEEEEECTTSCEEEEECC
T ss_pred HHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCcCChhhhCcc-----cHHHHH--hcccCeEEEEecCCCCEEEEEEE
Confidence 344444444443 25555555543 59999998874 666666 589999987 457777665666
Q ss_pred cchh
Q 038126 144 HQQR 147 (169)
Q Consensus 144 gqqr 147 (169)
.+..
T Consensus 84 ~~~t 87 (89)
T 3rco_A 84 CTET 87 (89)
T ss_dssp ----
T ss_pred cccc
Confidence 5543
No 186
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=27.74 E-value=31 Score=26.32 Aligned_cols=94 Identities=12% Similarity=-0.056 Sum_probs=53.8
Q ss_pred hccCCCchhhhhhhhcc-ccccccccccc--CCchhhHHHHHHH-HhcceeeeeecCcccccCCceeEEEecccccccCC
Q 038126 47 TGRDPETCSVVCKLLKE-EDNEAWGVEPF--DSDDADANRMSLV-RKGIVQATDIKFPLAFRAKSFSLAIVSDAVDYLSP 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkE-e~tEAWGVEPy--d~edad~~CksLV-rKGiVRvADIkfpLPYR~KSFSlViVSDalDyLsp 122 (169)
|-+|-.+..+-..|.+. ...+..|||.. -++.+..|.+..- ..=.+..+|+.-. |. ..+|.+||+.-.. -..
T Consensus 124 LDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~--~~~ 199 (272)
T 3a27_A 124 VDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-KDVADRVIMGYVH--KTH 199 (272)
T ss_dssp EETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC-TTCEEEEEECCCS--SGG
T ss_pred EEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc-cCCceEEEECCcc--cHH
Confidence 56666666655555554 25578898864 3455555554321 1112455666543 55 6689998764322 112
Q ss_pred CCchhhh-hcccCceEEEecCCc
Q 038126 123 KTLPELA-RVSADGVVIFAGYPH 144 (169)
Q Consensus 123 kTLPeLa-RvsadglVif~G~Pg 144 (169)
+.+.++. .+..+|+++++-++.
T Consensus 200 ~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 200 KFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEcCc
Confidence 4555544 456788998888776
No 187
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=27.69 E-value=31 Score=27.34 Aligned_cols=38 Identities=16% Similarity=0.301 Sum_probs=28.4
Q ss_pred CCceeEEEecccccccCC----CCchhhhhcccCceEEEecC
Q 038126 105 AKSFSLAIVSDAVDYLSP----KTLPELARVSADGVVIFAGY 142 (169)
Q Consensus 105 ~KSFSlViVSDalDyLsp----kTLPeLaRvsadglVif~G~ 142 (169)
..+|.+|+..+.|-|+.+ +.+.++.++=..|=++|.|.
T Consensus 211 ~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp CCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred CCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 467999999999999998 56777777654444455553
No 188
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=27.05 E-value=70 Score=21.97 Aligned_cols=52 Identities=13% Similarity=0.010 Sum_probs=38.9
Q ss_pred hhhhhccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeee
Q 038126 43 VRVRTGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDI 97 (169)
Q Consensus 43 v~~aLHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADI 97 (169)
|+..|.-||-+=+-+.+-+++.....|++.| -..-..-+.|.++|+|.....
T Consensus 17 IL~~L~~~~~~Gyei~~~l~~~~~~~~~i~~---gtly~~L~rLe~~GlI~~~~~ 68 (116)
T 3f8b_A 17 LLNVLKQGDNYVYGIIKQVKEASNGEMELNE---ATLYTIFKRLEKDGIISSYWG 68 (116)
T ss_dssp HHHHHHHCCBCHHHHHHHHHHHTTTCCCCCH---HHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHhCCCCHHHHHHHHHHHhCCCCCCCc---chHHHHHHHHHHCCCEEEEee
Confidence 3445667888888888888877777787765 235667889999999987654
No 189
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=26.25 E-value=55 Score=25.76 Aligned_cols=93 Identities=14% Similarity=0.005 Sum_probs=52.7
Q ss_pred hccCCCchhhhhhhhcccccccccccccCCchhhHHHHHHHHhcceeeeeecCcccccC-CceeEEEecccccccCC---
Q 038126 47 TGRDPETCSVVCKLLKEEDNEAWGVEPFDSDDADANRMSLVRKGIVQATDIKFPLAFRA-KSFSLAIVSDAVDYLSP--- 122 (169)
Q Consensus 47 LHvGPdTC~VVskLLkEe~tEAWGVEPyd~edad~~CksLVrKGiVRvADIkfpLPYR~-KSFSlViVSDalDyLsp--- 122 (169)
+++|.---+-++++|++..-+.-|.+- .+....-+.|.+.|+--... +.|.- -. ..+.+||+|-++..=.|
T Consensus 10 iGiGg~Gms~~A~~L~~~G~~V~~~D~---~~~~~~~~~L~~~gi~v~~g-~~~~~-l~~~~~d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 10 IGIGGTFMGGLAAIAKEAGFEVSGCDA---KMYPPMSTQLEALGIDVYEG-FDAAQ-LDEFKADVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp ESCCSHHHHHHHHHHHHTTCEEEEEES---SCCTTHHHHHHHTTCEEEES-CCGGG-GGSCCCSEEEECTTCCTTCHHHH
T ss_pred EEECHHHHHHHHHHHHhCCCEEEEEcC---CCCcHHHHHHHhCCCEEECC-CCHHH-cCCCCCCEEEECCCcCCCCHHHH
Confidence 456666666788899888877666543 32222345677778632211 11111 11 35899999999865444
Q ss_pred ----C-----Cchhh-hh-cccC-ceEEEecCCc
Q 038126 123 ----K-----TLPEL-AR-VSAD-GVVIFAGYPH 144 (169)
Q Consensus 123 ----k-----TLPeL-aR-vsad-glVif~G~Pg 144 (169)
+ +-+|+ +| +..+ -+|..||--|
T Consensus 85 ~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnG 118 (326)
T 3eag_A 85 AILNLGLPYISGPQWLSENVLHHHWVLGVAGTHG 118 (326)
T ss_dssp HHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSC
T ss_pred HHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCC
Confidence 2 22343 44 3333 4777888665
No 190
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=26.14 E-value=15 Score=28.87 Aligned_cols=66 Identities=20% Similarity=0.329 Sum_probs=38.6
Q ss_pred eeeeecCcccccCCceeEEEec-------------ccccccCCCCchhhh-hcccCceEEEecCCcchhhhhhhh-hhcC
Q 038126 93 QATDIKFPLAFRAKSFSLAIVS-------------DAVDYLSPKTLPELA-RVSADGVVIFAGYPHQQRAKVSEL-SKFG 157 (169)
Q Consensus 93 RvADIkfpLPYR~KSFSlViVS-------------DalDyLspkTLPeLa-RvsadglVif~G~Pgqqrakvael-skfg 157 (169)
.+++|.-..-+....|-+||.- |..+.++.. .-+|. -+..+|+|+|-|+|-...+...++ ..||
T Consensus 7 ~~~~~~~~~~~~~~~~p~~i~p~~~~~~~~~~~g~dl~~~~~~~-~~~l~~~l~~~GvvlfRg~~~~~~~~~~~~~~~~G 85 (330)
T 2q4a_A 7 VETPIPQQKHYESKPFPAVISPPSASIPIPALSLPLFTQTIKTQ-KHYLDSLLHESGAVLFRGFPVNSADDFNDVVEAFG 85 (330)
T ss_dssp EECCCSSCEEETTEEESEEEECC------CCCCHHHHHHHHHHT-HHHHHHHHHHHSEEEECSSCCCSHHHHHHHHHHTC
T ss_pred eeeccCCCccCCCCCCCEEEeCCCCCccccccccccHHHHHHHH-HHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHhC
Confidence 4555555544566677777732 233344434 66676 478999999999994222222222 3566
Q ss_pred Cc
Q 038126 158 RP 159 (169)
Q Consensus 158 rp 159 (169)
..
T Consensus 86 ~~ 87 (330)
T 2q4a_A 86 FD 87 (330)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 191
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=25.73 E-value=71 Score=21.99 Aligned_cols=10 Identities=10% Similarity=0.002 Sum_probs=5.0
Q ss_pred ceeeeeecCc
Q 038126 91 IVQATDIKFP 100 (169)
Q Consensus 91 iVRvADIkfp 100 (169)
|+-++|++..
T Consensus 8 i~~iSD~H~~ 17 (228)
T 1uf3_A 8 ILATSNPMGD 17 (228)
T ss_dssp EEEEECCTTC
T ss_pred EEEEeeccCC
Confidence 4445555543
No 192
>1dbd_A Regulatory protein E2; DNA-binding domain, gene regulation; NMR {Bovine papillomavirus type 1} SCOP: d.58.8.1
Probab=25.46 E-value=29 Score=25.31 Aligned_cols=34 Identities=12% Similarity=0.266 Sum_probs=25.7
Q ss_pred eEEEecCCcchhhhhhhhh-hcCCccccccCcccC
Q 038126 136 VVIFAGYPHQQRAKVSELS-KFGRPAKLRSSTWWI 169 (169)
Q Consensus 136 lVif~G~Pgqqrakvaels-kfgrpaK~rsssWW~ 169 (169)
||++-|-|.|.|-----+. |+-..-+.=|++||.
T Consensus 18 villkG~aN~LKC~RyRlk~k~~~lf~~~STTW~w 52 (100)
T 1dbd_A 18 FALISGTANQVKCYRFRVKKNHRHRYENCTTTWFT 52 (100)
T ss_dssp EEEEEECHHHHHHHHHHHHHHGGGGCSEECCCCCC
T ss_pred EEEEEcCCCcccChhhhcccccCCcceeEccEEEE
Confidence 4499999999876555555 677777888999983
No 193
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=22.97 E-value=40 Score=26.44 Aligned_cols=36 Identities=28% Similarity=0.455 Sum_probs=28.3
Q ss_pred eEEEeccccc--ccCCCCchhhhhcccCceEE---EecCCc
Q 038126 109 SLAIVSDAVD--YLSPKTLPELARVSADGVVI---FAGYPH 144 (169)
Q Consensus 109 SlViVSDalD--yLspkTLPeLaRvsadglVi---f~G~Pg 144 (169)
=++|+.|.|. +|.....|-|.|+.++|+.. ++.+|.
T Consensus 9 vv~I~~D~l~~~~l~~~~tP~ld~La~~G~~f~~~~~~~ps 49 (393)
T 2gso_A 9 LLLISIDGLRADMLDRGITPNLSHLAREGVRARWMAPSYPS 49 (393)
T ss_dssp EEEEEETTCCGGGGGSSCCHHHHHHHHHSEEESCEECCSSC
T ss_pred EEEEEECCCCcccccccCCchHHHHHhCCeeccCceeCCCC
Confidence 4789999985 47776779999999999874 556774
No 194
>1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B*
Probab=21.94 E-value=30 Score=25.11 Aligned_cols=13 Identities=8% Similarity=0.046 Sum_probs=10.8
Q ss_pred hhhhhhhhccCCC
Q 038126 40 SGTVRVRTGRDPE 52 (169)
Q Consensus 40 t~ev~~aLHvGPd 52 (169)
..+||+||||.++
T Consensus 16 ~~~V~~AL~v~~~ 28 (153)
T 1whs_B 16 RRDVQMALHANVT 28 (153)
T ss_dssp CHHHHHHTTCSTT
T ss_pred CHHHHHHhCCCCC
Confidence 4689999999864
No 195
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=21.53 E-value=34 Score=24.43 Aligned_cols=23 Identities=17% Similarity=0.614 Sum_probs=17.8
Q ss_pred cCceEEEecCCcchhhhhhhhhh
Q 038126 133 ADGVVIFAGYPHQQRAKVSELSK 155 (169)
Q Consensus 133 adglVif~G~Pgqqrakvaelsk 155 (169)
.+-+|-|+|+++++|+.+.++-+
T Consensus 23 ~g~~Ic~sGf~~~er~~l~~~i~ 45 (112)
T 3l46_A 23 QDCILSFLGFSDEEKTNMEEMTE 45 (112)
T ss_dssp TTCEECEESCCHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCHHHHHHHHHHHH
Confidence 34567789999999988877654
No 196
>4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B*
Probab=20.64 E-value=32 Score=24.72 Aligned_cols=13 Identities=15% Similarity=0.013 Sum_probs=10.8
Q ss_pred hhhhhhhhccCCC
Q 038126 40 SGTVRVRTGRDPE 52 (169)
Q Consensus 40 t~ev~~aLHvGPd 52 (169)
..+||+||||.+.
T Consensus 17 ~~~V~~AL~v~~~ 29 (155)
T 4az3_B 17 NPYVRKALNIPEQ 29 (155)
T ss_dssp SHHHHHHTTCCTT
T ss_pred CHHHHHHcCCCCC
Confidence 5689999999764
No 197
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=20.34 E-value=34 Score=30.51 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=34.2
Q ss_pred ceeeeeec--Cc---ccccCCceeEEEecccccccCC----CCchhhhhcccCceEEEec
Q 038126 91 IVQATDIK--FP---LAFRAKSFSLAIVSDAVDYLSP----KTLPELARVSADGVVIFAG 141 (169)
Q Consensus 91 iVRvADIk--fp---LPYR~KSFSlViVSDalDyLsp----kTLPeLaRvsadglVif~G 141 (169)
-+|||.+. .+ +||=.--| .+.++|||. .|+-|.|-.-+|||||--.
T Consensus 250 A~Rva~~~~~~~lPV~~Y~r~~Y-----~~~~~fLS~~DL~~TigesaalGa~GiViWGs 304 (424)
T 2pe4_A 250 AFRVAVAAGDPNLPVLPYVQIFY-----DTTNHFLPLDELEHSLGESAAQGAAGVVLWVS 304 (424)
T ss_dssp HHHHHHHTTCTTCCBCCEECSBC-----BTSCCBCCHHHHHTTHHHHHHTTCSEEEEECC
T ss_pred HHHHHhccCCCCCceEEEEeeEe-----cCccccccHHHHHHHHHHHHHcCCCeEEEecc
Confidence 35777652 22 45533233 688899999 9999999999999999865
No 198
>3iec_E 120 kDa protein, cytotoxicity-associated immunodominant antigen; protein-protein complex, kinase, virulence factor, alternati promoter usage; 2.20A {Helicobacter pylori}
Probab=20.23 E-value=24 Score=27.18 Aligned_cols=23 Identities=43% Similarity=0.687 Sum_probs=17.7
Q ss_pred EecCCcchhhhhhhhhhcCCccc
Q 038126 139 FAGYPHQQRAKVSELSKFGRPAK 161 (169)
Q Consensus 139 f~G~PgqqrakvaelskfgrpaK 161 (169)
.+|||-..-++|.+|||-|+.++
T Consensus 65 ~~gfplkr~~kV~DlSkvGlS~s 87 (125)
T 3iec_E 65 AAGFPLKRHDKVDDLSKVGLSAS 87 (125)
T ss_pred cccchhhcccccccccccccccC
Confidence 45788888888888888887543
Done!