Query 038131
Match_columns 654
No_of_seqs 413 out of 3658
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 13:21:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 7.5E-47 2.5E-51 408.1 29.1 379 15-479 6-388 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.5E-45 5E-50 398.0 24.6 360 2-446 28-390 (437)
3 3utm_A Tankyrase-1; tankyrase, 100.0 9.4E-41 3.2E-45 348.8 19.9 304 15-442 16-322 (351)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 1.9E-40 6.7E-45 330.4 19.5 224 15-448 2-238 (253)
5 3b7b_A Euchromatic histone-lys 100.0 2.2E-39 7.4E-44 319.3 24.2 220 15-445 3-222 (237)
6 4g8k_A 2-5A-dependent ribonucl 100.0 5.4E-40 1.8E-44 341.7 20.0 289 21-448 23-316 (337)
7 2xai_A ASB-9, ankyrin repeat a 100.0 7.4E-39 2.5E-43 320.5 22.8 210 22-445 2-211 (261)
8 1oy3_D Transcription factor in 100.0 4.4E-39 1.5E-43 325.6 21.0 221 16-445 2-270 (282)
9 1k1a_A B-cell lymphoma 3-encod 100.0 5.9E-39 2E-43 316.8 20.4 224 16-449 2-232 (241)
10 1wdy_A 2-5A-dependent ribonucl 100.0 5.8E-38 2E-42 317.4 26.5 149 2-166 19-179 (285)
11 3d9h_A CDNA FLJ77766, highly s 100.0 4.4E-38 1.5E-42 319.0 23.2 215 15-443 51-265 (285)
12 4g8k_A 2-5A-dependent ribonucl 100.0 5.3E-38 1.8E-42 326.7 23.3 271 2-420 39-325 (337)
13 2dzn_A Probable 26S proteasome 100.0 9.6E-38 3.3E-42 305.5 21.6 214 23-444 2-219 (228)
14 2xai_A ASB-9, ankyrin repeat a 100.0 1.5E-37 5.3E-42 310.9 21.5 230 2-445 17-250 (261)
15 4b93_B Ankyrin repeat domain-c 100.0 2E-38 7E-43 318.1 14.6 217 18-445 6-230 (269)
16 2fo1_E LIN-12 protein; beta-ba 100.0 5.3E-38 1.8E-42 331.1 18.4 263 16-448 87-361 (373)
17 3aji_A 26S proteasome non-ATPa 100.0 2.6E-37 8.7E-42 303.1 22.0 215 20-445 3-217 (231)
18 1s70_B 130 kDa myosin-binding 100.0 5.1E-37 1.8E-41 313.4 20.1 237 20-442 37-274 (299)
19 3ljn_A Hypothetical protein; a 100.0 6.4E-37 2.2E-41 322.1 20.8 223 15-449 12-260 (364)
20 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-36 7.9E-41 305.7 23.9 257 21-446 3-266 (285)
21 3utm_A Tankyrase-1; tankyrase, 100.0 1.4E-36 4.9E-41 317.1 21.7 310 2-445 38-351 (351)
22 3d9h_A CDNA FLJ77766, highly s 100.0 6.1E-36 2.1E-40 303.3 22.9 242 20-477 12-264 (285)
23 3ljn_A Hypothetical protein; a 100.0 1.5E-36 5.1E-41 319.2 17.6 242 2-445 34-301 (364)
24 3kea_A K1L; tropism, ANK repea 100.0 7.4E-36 2.5E-40 302.6 21.2 221 2-448 14-236 (285)
25 2f8y_A Notch homolog 1, transl 100.0 1.4E-35 4.9E-40 289.0 21.6 209 2-420 5-215 (223)
26 1yyh_A HN1;, notch 1, ankyrin 100.0 2.5E-35 8.6E-40 293.4 20.3 210 2-420 37-247 (253)
27 3eu9_A Huntingtin-interacting 100.0 4.9E-35 1.7E-39 288.1 21.5 135 16-163 2-136 (240)
28 3aji_A 26S proteasome non-ATPa 100.0 6.7E-35 2.3E-39 285.9 20.3 210 2-420 20-229 (231)
29 1oy3_D Transcription factor in 100.0 1.2E-34 4.3E-39 292.8 21.9 269 50-482 2-272 (282)
30 1ikn_D Protein (I-kappa-B-alph 100.0 3.9E-36 1.3E-40 295.9 10.6 222 17-445 2-231 (236)
31 4b93_B Ankyrin repeat domain-c 100.0 3.1E-35 1.1E-39 294.9 16.2 148 2-163 25-179 (269)
32 1k1a_A B-cell lymphoma 3-encod 100.0 1.6E-34 5.4E-39 285.0 18.3 213 2-420 23-240 (241)
33 2f8y_A Notch homolog 1, transl 100.0 1.3E-34 4.4E-39 282.2 17.0 206 33-448 1-206 (223)
34 1sw6_A Regulatory protein SWI6 100.0 4.3E-35 1.5E-39 303.0 14.3 242 2-444 61-327 (327)
35 3b7b_A Euchromatic histone-lys 100.0 7.2E-34 2.5E-38 279.7 21.4 146 2-163 25-171 (237)
36 2rfa_A Transient receptor pote 100.0 1E-33 3.4E-38 277.8 19.9 133 22-163 2-148 (232)
37 2fo1_E LIN-12 protein; beta-ba 100.0 1.8E-33 6E-38 296.6 22.2 206 5-420 150-370 (373)
38 3eu9_A Huntingtin-interacting 100.0 3.9E-33 1.4E-37 274.4 23.2 212 2-420 23-234 (240)
39 3hra_A Ankyrin repeat family p 100.0 4.8E-33 1.7E-37 266.4 22.3 128 20-159 2-129 (201)
40 2dzn_A Probable 26S proteasome 100.0 2.9E-33 1E-37 273.5 21.2 143 2-159 16-163 (228)
41 2pnn_A Transient receptor pote 100.0 3.1E-33 1.1E-37 281.6 14.0 218 15-438 5-272 (273)
42 2etb_A Transient receptor pote 100.0 8.7E-33 3E-37 275.5 15.9 132 23-163 2-166 (256)
43 1s70_B 130 kDa myosin-binding 100.0 1.1E-32 3.9E-37 281.1 16.1 147 2-163 54-226 (299)
44 2rfa_A Transient receptor pote 100.0 1.7E-31 5.9E-36 261.8 21.8 196 56-448 2-212 (232)
45 3kea_A K1L; tropism, ANK repea 100.0 8.9E-32 3E-36 272.6 16.0 199 33-448 9-210 (285)
46 1ikn_D Protein (I-kappa-B-alph 100.0 6.3E-33 2.2E-37 272.9 6.5 197 51-448 2-199 (236)
47 4gpm_A Engineered protein OR26 100.0 4.2E-31 1.5E-35 244.8 17.2 147 2-164 18-164 (169)
48 4gpm_A Engineered protein OR26 100.0 9.2E-31 3.1E-35 242.5 18.3 125 25-163 6-130 (169)
49 3jxi_A Vanilloid receptor-rela 100.0 1.3E-31 4.6E-36 267.5 13.3 135 20-163 2-170 (260)
50 3hra_A Ankyrin repeat family p 100.0 2.7E-30 9.3E-35 247.2 20.6 185 54-448 2-193 (201)
51 1sw6_A Regulatory protein SWI6 100.0 2.5E-31 8.4E-36 274.8 13.8 127 2-137 111-266 (327)
52 2etb_A Transient receptor pote 100.0 6.8E-31 2.3E-35 261.7 16.2 196 56-448 1-236 (256)
53 2pnn_A Transient receptor pote 100.0 1.5E-30 5.3E-35 261.8 13.5 208 50-448 6-248 (273)
54 4hbd_A KN motif and ankyrin re 100.0 3E-30 1E-34 260.0 12.2 129 22-163 75-210 (276)
55 2vge_A RELA-associated inhibit 100.0 6.8E-32 2.3E-36 263.9 -2.1 146 4-163 1-150 (229)
56 3v30_A DNA-binding protein rfx 100.0 5.1E-29 1.7E-33 232.2 16.5 124 23-159 2-125 (172)
57 2rfm_A Putative ankyrin repeat 100.0 5E-29 1.7E-33 236.8 16.8 135 15-163 27-161 (192)
58 2rfm_A Putative ankyrin repeat 100.0 1.1E-28 3.8E-33 234.3 16.7 164 49-419 27-190 (192)
59 3jxi_A Vanilloid receptor-rela 100.0 4.1E-29 1.4E-33 249.4 13.7 204 54-448 2-240 (260)
60 4hbd_A KN motif and ankyrin re 100.0 1.5E-28 5.1E-33 247.6 16.2 148 3-163 91-244 (276)
61 3v31_A Ankyrin repeat family A 100.0 7.3E-28 2.5E-32 223.2 18.4 128 22-163 2-129 (167)
62 3v30_A DNA-binding protein rfx 100.0 3.3E-28 1.1E-32 226.7 15.7 169 57-436 2-171 (172)
63 2vge_A RELA-associated inhibit 100.0 7.9E-30 2.7E-34 249.2 4.1 199 39-449 1-204 (229)
64 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.7E-27 9.3E-32 219.9 17.3 131 19-163 10-140 (169)
65 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.4E-27 4.7E-32 220.0 15.1 111 22-140 4-114 (162)
66 3v31_A Ankyrin repeat family A 99.9 2.3E-27 7.7E-32 219.8 16.4 158 56-420 2-159 (167)
67 3f6q_A Integrin-linked protein 99.9 1.8E-27 6.1E-32 223.3 15.5 129 21-162 3-131 (179)
68 1ycs_B 53BP2, P53BP2; ankyrin 99.9 3.1E-29 1E-33 247.1 2.5 129 20-163 2-130 (239)
69 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.9E-27 9.8E-32 217.9 15.1 144 2-161 19-162 (162)
70 1awc_B Protein (GA binding pro 99.9 5.3E-27 1.8E-31 214.0 16.6 126 23-163 2-127 (153)
71 2aja_A Ankyrin repeat family p 99.9 1.1E-29 3.9E-34 265.2 -3.5 131 18-159 87-222 (376)
72 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.1E-27 2.4E-31 213.8 15.2 122 23-158 2-123 (156)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.3E-26 4.6E-31 215.1 17.2 142 2-159 28-169 (169)
74 3twr_A Tankyrase-2; ankyrin re 99.9 2.9E-27 9.8E-32 218.7 12.1 132 19-163 4-135 (165)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.6E-27 5.4E-32 234.8 8.4 180 54-445 2-193 (239)
76 1d9s_A Cyclin-dependent kinase 99.9 7.8E-27 2.7E-31 208.4 11.5 132 15-161 4-136 (136)
77 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-26 5.3E-31 213.7 13.7 98 53-163 4-102 (165)
78 1awc_B Protein (GA binding pro 99.9 7.2E-26 2.4E-30 206.5 16.3 137 2-155 16-152 (153)
79 3f6q_A Integrin-linked protein 99.9 3.5E-26 1.2E-30 214.4 14.3 151 2-167 19-169 (179)
80 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-25 5.6E-30 204.7 15.3 140 2-158 16-155 (156)
81 2aja_A Ankyrin repeat family p 99.9 3.6E-27 1.2E-31 246.3 4.6 142 2-166 106-255 (376)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 1.9E-25 6.4E-30 204.5 10.5 138 15-167 4-142 (156)
83 2jab_A H10-2-G3; HER2, darpin, 99.9 6.4E-25 2.2E-29 195.9 12.9 127 19-159 10-136 (136)
84 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.7E-24 5.7E-29 189.9 15.3 126 22-161 1-126 (126)
85 3t8k_A Uncharacterized protein 99.9 4.4E-25 1.5E-29 207.8 8.6 109 23-140 6-126 (186)
86 3c5r_A BARD-1, BRCA1-associate 99.9 7.5E-25 2.6E-29 195.7 8.9 127 18-158 5-131 (137)
87 3t8k_A Uncharacterized protein 99.9 1.4E-24 4.6E-29 204.5 6.7 145 3-165 21-183 (186)
88 3aaa_C Myotrophin, protein V-1 99.9 8.8E-24 3E-28 184.9 11.0 113 20-139 4-116 (123)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 1E-23 3.5E-28 192.9 10.9 76 361-441 76-152 (156)
90 3ui2_A Signal recognition part 99.9 8.7E-24 3E-28 208.6 11.2 112 20-139 42-154 (244)
91 3deo_A Signal recognition part 99.9 8.6E-24 2.9E-28 198.9 10.6 114 19-140 40-154 (183)
92 1d9s_A Cyclin-dependent kinase 99.9 2.5E-23 8.6E-28 185.5 11.8 101 49-163 4-105 (136)
93 3ehr_A Osteoclast-stimulating 99.9 1.3E-23 4.4E-28 204.3 8.9 138 16-167 66-204 (222)
94 3deo_A Signal recognition part 99.9 8.1E-24 2.8E-28 199.1 3.1 96 54-163 41-137 (183)
95 3ui2_A Signal recognition part 99.9 2.9E-24 9.9E-29 212.0 -0.6 125 21-163 13-138 (244)
96 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-21 5.5E-26 173.7 13.2 109 2-118 28-136 (136)
97 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.7E-21 5.7E-26 161.2 11.7 93 22-120 1-93 (93)
98 2b0o_E UPLC1; arfgap, structur 99.8 1.8E-21 6.2E-26 197.8 11.0 124 2-140 165-297 (301)
99 2b0o_E UPLC1; arfgap, structur 99.8 6.2E-21 2.1E-25 193.8 13.6 128 20-161 148-284 (301)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.4E-20 4.7E-25 164.8 13.7 111 2-120 16-126 (126)
101 2l6b_A NR1C; ankyrin, consensu 99.8 2.5E-21 8.7E-26 166.9 8.5 109 18-133 4-112 (115)
102 3lvq_E ARF-GAP with SH3 domain 99.8 1.7E-20 5.8E-25 204.7 15.0 132 20-165 129-269 (497)
103 1dcq_A PYK2-associated protein 99.8 2.9E-20 1E-24 186.7 15.0 127 23-162 130-264 (278)
104 3jue_A Arfgap with coiled-coil 99.8 2.2E-20 7.5E-25 194.2 12.9 130 18-161 194-326 (368)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.1E-20 1.1E-24 153.4 11.0 93 56-161 1-93 (93)
106 3c5r_A BARD-1, BRCA1-associate 99.8 6.1E-20 2.1E-24 163.6 12.5 120 52-198 5-124 (137)
107 1dcq_A PYK2-associated protein 99.8 7E-20 2.4E-24 183.9 11.8 122 3-139 145-273 (278)
108 3aaa_C Myotrophin, protein V-1 99.8 5.3E-20 1.8E-24 160.7 8.1 99 2-108 21-119 (123)
109 3jue_A Arfgap with coiled-coil 99.8 2.5E-19 8.7E-24 186.2 13.6 131 2-140 214-348 (368)
110 3ehr_A Osteoclast-stimulating 99.8 5.8E-20 2E-24 178.3 7.6 119 2-129 87-206 (222)
111 3lvq_E ARF-GAP with SH3 domain 99.8 2.7E-19 9.2E-24 195.2 12.7 123 2-139 146-277 (497)
112 2zgd_A 3 repeat synthetic anky 99.8 1.2E-18 4E-23 148.9 10.0 94 15-114 16-109 (110)
113 2l6b_A NR1C; ankyrin, consensu 99.8 6.5E-19 2.2E-23 151.7 8.3 103 52-167 4-106 (115)
114 2zgd_A 3 repeat synthetic anky 99.7 3E-17 1E-21 140.0 9.1 93 50-155 17-109 (110)
115 3rhw_A Avermectin-sensitive gl 35.1 1.8E+02 0.006 28.7 10.1 39 593-631 258-296 (347)
116 3rko_J NADH-quinone oxidoreduc 34.8 1.1E+02 0.0037 27.3 7.3 19 610-628 55-73 (184)
117 4ev6_A Magnesium transport pro 20.4 1.1E+02 0.0036 30.3 5.2 21 581-601 281-301 (339)
118 1vry_A Glycine receptor alpha- 20.2 1.6E+02 0.0054 21.9 4.7 39 594-632 18-56 (76)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.5e-47 Score=408.08 Aligned_cols=379 Identities=19% Similarity=0.195 Sum_probs=267.6
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
+++..|..|+||||+||..|+.++|++|++++++ ++.+|..|+||||+||..|+.+++++|+++|++++ .++..
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~ 79 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN-----AKAKD 79 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSS-----CCCTT
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-----CCCCC
Confidence 5677777788888888888888888888877776 77777778888888888888888888888877776 67777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhh
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQY 174 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 174 (654)
|.||||+|++.|+.+++++|++++++ ++.+|..|.||||+|+..| +.++++.|++.+.+.+..+
T Consensus 80 g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~~~~~~~~~-------- 143 (437)
T 1n11_A 80 DQTPLHCAARIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREG-------HVETVLALLEKEASQACMT-------- 143 (437)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHT-------CHHHHHHHHHTTCCSCCCC--------
T ss_pred CCCHHHHHHHCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcC-------CHHHHHHHHhCCCCCcCCC--------
Confidence 88888888888888888888887776 7777777888888888777 7778888887777665444
Q ss_pred hhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCC
Q 038131 175 QLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPP 254 (654)
Q Consensus 175 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (654)
..|.+|.++++..+....+. .+++.|.+++.. +..+.+| .|.+
T Consensus 144 ------~~g~t~L~~A~~~g~~~~v~----~Ll~~g~~~~~~-~~~g~t~-----------------------L~~A--- 186 (437)
T 1n11_A 144 ------KKGFTPLHVAAKYGKVRVAE----LLLERDAHPNAA-GKNGLTP-----------------------LHVA--- 186 (437)
T ss_dssp ------TTSCCHHHHHHHTTCHHHHH----HHHHTTCCTTCC-CSSCCCH-----------------------HHHH---
T ss_pred ------CCCCCHHHHHHHcCCHHHHH----HHHhCCCCCCCC-CCCCCCH-----------------------HHHH---
Confidence 34556777766665554333 334445443322 1112222 1111
Q ss_pred CcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHcc-ccccccCCCCCCCCCCCCccccCCC
Q 038131 255 NYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRA-SLYEYDDDGGKPLRRPSSQAEEDET 333 (654)
Q Consensus 255 ~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~-~~~~~d~~g~tpLh~a~~~~~~~~~ 333 (654)
...++.+++++|+..+..+......|.+.+..... .++ .++++.|++.+ ..+..|..|+||||+|+.
T Consensus 187 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~------- 254 (437)
T 1n11_A 187 VHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAK--QNQ---VEVARSLLQYGGSANAESVQGVTPLHLAAQ------- 254 (437)
T ss_dssp HHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHH--TTC---HHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-------
T ss_pred HHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH--cCC---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------
Confidence 22345667777764443332222334555544332 233 78999999988 567778899999999987
Q ss_pred CCCCccCCCCchhhhccccCCC--ccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHH
Q 038131 334 SPYPIVDGGDTDAVLEGKTGST--IPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHV 411 (654)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~i 411 (654)
.+..+.+..++.... +..|..|.||||+|++.|+.+++++|+++ +.+++.+|..|+||||+|+.+|+.++
T Consensus 255 -------~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~ 326 (437)
T 1n11_A 255 -------EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKL 326 (437)
T ss_dssp -------TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHH
T ss_pred -------CCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHHHHHHHcCcHHH
Confidence 567788888887665 44578899999999999999999999998 88999999999999999999999999
Q ss_pred HHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCCcCCcchhhhhHHHHH-HhhcCCChhhhhhhhh
Q 038131 412 YQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKPWLTPGAALQMQWELR-WYEQDKSAEDLFTETH 479 (654)
Q Consensus 412 v~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~~~~~~~~~~~~~~~~-~~~~g~t~~di~~~~~ 479 (654)
|++|+++++ ++|.+|..|+||||+|++.|+.+++... ++...+.. ..++|.||.+++.+..
T Consensus 327 v~~Ll~~ga----d~n~~~~~g~t~L~~A~~~g~~~iv~~L---l~~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 327 VKFLLQHQA----DVNAKTKLGYSPLHQAAQQGHTDIVTLL---LKNGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp HHHHHHTTC----CTTCCCTTSCCHHHHHHHTTCHHHHHHH---HHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred HHHHHhcCC----CCCCCCCCCCCHHHHHHHCChHHHHHHH---HHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 999999998 9999999999999999999985443211 00000011 1238999999987664
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-45 Score=397.96 Aligned_cols=360 Identities=17% Similarity=0.212 Sum_probs=302.4
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|++|+++|+ +++.+|..|+||||+||..|+.+++++|++.+++ ++.+|.+|+||||+||..|+.++|++|+++|+
T Consensus 28 ~~v~~Ll~~g~--~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 104 (437)
T 1n11_A 28 PIVKNLLQRGA--SPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-VNAKAKDDQTPLHCAARIGHTNMVKLLLENNA 104 (437)
T ss_dssp HHHHHHHHTTC--CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC
Confidence 68999999988 7899999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ ..+..|.||||+|++.|+.+++++|++++++ .+..+..|.||||+|+..| +.+++++|++++++
T Consensus 105 ~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~g~~ 171 (437)
T 1n11_A 105 NPN-----LATTAGHTPLHIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKYG-------KVRVAELLLERDAH 171 (437)
T ss_dssp CTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCC
T ss_pred CCC-----CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHcC-------CHHHHHHHHhCCCC
Confidence 998 8999999999999999999999999999887 8889999999999999999 99999999999998
Q ss_pred ccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCccc
Q 038131 162 VDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESR 241 (654)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (654)
++..+ ..|.+|.++++..+.... ++.+++.|.++... +.++.+|
T Consensus 172 ~~~~~--------------~~g~t~L~~A~~~~~~~~----v~~Ll~~g~~~~~~-~~~g~t~----------------- 215 (437)
T 1n11_A 172 PNAAG--------------KNGLTPLHVAVHHNNLDI----VKLLLPRGGSPHSP-AWNGYTP----------------- 215 (437)
T ss_dssp TTCCC--------------SSCCCHHHHHHHTTCHHH----HHHHGGGTCCSCCC-CTTCCCH-----------------
T ss_pred CCCCC--------------CCCCCHHHHHHHcCCHHH----HHHHHhCCCCCCCc-CCCCCCH-----------------
Confidence 87665 457788888887766544 44555666554332 2222232
Q ss_pred ccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHcc-ccccccCCCCCC
Q 038131 242 HNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRA-SLYEYDDDGGKP 320 (654)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~-~~~~~d~~g~tp 320 (654)
.|.+ ...+..+++++|+.....+......|.+.+.... ..++ .++++.|++++ ..+..|..|+||
T Consensus 216 ------L~~A---~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~--~~g~---~~~v~~Ll~~~~~~~~~~~~g~t~ 281 (437)
T 1n11_A 216 ------LHIA---AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA--QEGH---AEMVALLLSKQANGNLGNKSGLTP 281 (437)
T ss_dssp ------HHHH---HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH--HTTC---HHHHHHHHTTTCCTTCCCTTCCCH
T ss_pred ------HHHH---HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH--HCCC---HHHHHHHHhcCCCCCCCCCCCCCH
Confidence 1111 2345678888888544433333345556665443 3334 78999999988 566789999999
Q ss_pred CCCCCCccccCCCCCCCccCCCCchhhhccccCCC--ccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCc
Q 038131 321 LRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGST--IPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKN 398 (654)
Q Consensus 321 Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T 398 (654)
||+|+. .+..+.++.+++.+. +..|..|+||||+|+..|+.++|++|++. +.+++.+|..|+|
T Consensus 282 L~~A~~--------------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t 346 (437)
T 1n11_A 282 LHLVAQ--------------EGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYS 346 (437)
T ss_dssp HHHHHH--------------HTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCC
T ss_pred HHHHHH--------------cCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCC
Confidence 999987 456677777776544 55678999999999999999999999997 8999999999999
Q ss_pred hhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCC
Q 038131 399 IVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDH 446 (654)
Q Consensus 399 ~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~ 446 (654)
|||+|+++|+.++|++|+++|+ +++.+|.+|+||||+|++.|+.
T Consensus 347 ~L~~A~~~g~~~iv~~Ll~~ga----~~~~~~~~g~t~l~~A~~~g~~ 390 (437)
T 1n11_A 347 PLHQAAQQGHTDIVTLLLKNGA----SPNEVSSDGTTPLAIAKRLGYI 390 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC----CSCCCCSSSCCHHHHHHHTTCH
T ss_pred HHHHHHHCChHHHHHHHHHCcC----CCCCCCCCCCCHHHHHHHcCcH
Confidence 9999999999999999999998 9999999999999999999983
No 3
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9.4e-41 Score=348.79 Aligned_cols=304 Identities=15% Similarity=0.116 Sum_probs=239.2
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
..+..+..|.|+||.||..|+.+.++.|+...+..++.+|..|+||||+||..|+.++|++|+++|++++ .+|..
T Consensus 16 ~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~ 90 (351)
T 3utm_A 16 KAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH-----AKDKG 90 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTT
T ss_pred eeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----ccCCC
Confidence 4566778899999999999999999999988655599999999999999999999999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhh
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQY 174 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 174 (654)
|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..| +.+++++|+++|++++..+.
T Consensus 91 g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~~~------- 155 (351)
T 3utm_A 91 GLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKN-------RVEVCSLLLSHGADPTLVNC------- 155 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCT-------
T ss_pred CCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCccccC-------
Confidence 99999999999999999999999987 9999999999999999999 99999999999999876653
Q ss_pred hhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCC
Q 038131 175 QLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPP 254 (654)
Q Consensus 175 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (654)
.+.+|..+.........+
T Consensus 156 -------~g~~~l~~a~~~~~~~~~------------------------------------------------------- 173 (351)
T 3utm_A 156 -------HGKSAVDMAPTPELRERL------------------------------------------------------- 173 (351)
T ss_dssp -------TSCCHHHHCSSHHHHHHH-------------------------------------------------------
T ss_pred -------CCCcchHHHhhhhhHHHH-------------------------------------------------------
Confidence 344454443332222111
Q ss_pred CcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHcc-ccccccCCCCCCCCCCCCccccCCC
Q 038131 255 NYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRA-SLYEYDDDGGKPLRRPSSQAEEDET 333 (654)
Q Consensus 255 ~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~-~~~~~d~~g~tpLh~a~~~~~~~~~ 333 (654)
++.. .+.+. ........ .+.++.++... .....+..|+||||+|+...+
T Consensus 174 ---------~~~~-----------~~~~~---~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~---- 223 (351)
T 3utm_A 174 ---------TYEF-----------KGHSL---LQAAREAD---LAKVKKTLALEIINFKQPQSHETALHCAVASLH---- 223 (351)
T ss_dssp ---------HHHH-----------HHHHH---HHHHHTTC---HHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCS----
T ss_pred ---------Hhhh-----------cccHH---HHHHHhcc---HHHHHHHHHhhcccccCCCCCCCHHHHHHHHhC----
Confidence 1111 00000 11111111 44555555554 445567788899988876432
Q ss_pred CCCCccCCCCchhhhccccCCC--ccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHH
Q 038131 334 SPYPIVDGGDTDAVLEGKTGST--IPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHV 411 (654)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~i 411 (654)
.+..+.+..++..+. +.+|..|+||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+.+|+.++
T Consensus 224 -------~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~~~ 295 (351)
T 3utm_A 224 -------PKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHLQT 295 (351)
T ss_dssp -------TTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred -------ccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 234456666665544 44577899999999999999999999986 88889999999999999999999999
Q ss_pred HHHHHhcCcccccccccccCCCCcHhHHHhh
Q 038131 412 YQLLLKTTIMKDSVFRKVDDQGNSALHLAAT 442 (654)
Q Consensus 412 v~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~ 442 (654)
+++|+++++ +++.+|..|+||||+|..
T Consensus 296 v~~Ll~~ga----d~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 296 CRLLLSYGS----DPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp HHHHHHTTC----CTTCCCTTSCCHHHHSCH
T ss_pred HHHHHHcCC----CCCCcCCCCCChhhhhhH
Confidence 999999988 888999999999999843
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.9e-40 Score=330.40 Aligned_cols=224 Identities=20% Similarity=0.177 Sum_probs=173.1
Q ss_pred ccccCCCCCChHHHHHHhcC-------------CHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 15 VLKIGDERGSTPLHIAAGLG-------------NVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G-------------~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|.+|.+|+||||+||..| +.+++++|++.+++..+.+|..|+||||+||..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 58899999999999999988 89999999999999666779999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .+|..|.||||+|+..|+.+++++|++.++.+++.+|..|.||||+|+..+ +.++++.|++.|++
T Consensus 82 ~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~ 149 (253)
T 1yyh_A 82 DAN-----IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLA-------VEGMLEDLINSHAD 149 (253)
T ss_dssp CTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHT-------CSSHHHHHHHTTCC
T ss_pred CCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcC-------hHHHHHHHHHcCCC
Confidence 998 899999999999999999999999999998669999999999999999998 78888888877655
Q ss_pred ccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCccc
Q 038131 162 VDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESR 241 (654)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (654)
++..
T Consensus 150 ~~~~---------------------------------------------------------------------------- 153 (253)
T 1yyh_A 150 VNAV---------------------------------------------------------------------------- 153 (253)
T ss_dssp TTCB----------------------------------------------------------------------------
T ss_pred CCCc----------------------------------------------------------------------------
Confidence 4322
Q ss_pred ccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCC
Q 038131 242 HNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPL 321 (654)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpL 321 (654)
T Consensus 154 -------------------------------------------------------------------------------- 153 (253)
T 1yyh_A 154 -------------------------------------------------------------------------------- 153 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhH
Q 038131 322 RRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVL 401 (654)
Q Consensus 322 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh 401 (654)
|..|+||||+|+..|+.+++++|++. +.+++.+|..|+||||
T Consensus 154 -------------------------------------d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 154 -------------------------------------DDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLF 195 (253)
T ss_dssp -------------------------------------CTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred -------------------------------------CCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 24689999999999999999999997 8999999999999999
Q ss_pred HHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCC
Q 038131 402 LAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 402 ~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
+|+++|+.+++++|+++++ +++.+|..|+||||+|++.|+.++
T Consensus 196 ~A~~~~~~~~v~~Ll~~ga----~~~~~d~~g~tpl~~A~~~g~~~i 238 (253)
T 1yyh_A 196 LAAREGSYETAKVLLDHFA----NRDITDHMDRLPRDIAQERMHHDI 238 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTC----CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHCCCHHHHHHHHHcCC----CccccccCCCCHHHHHHHcCCHHH
Confidence 9999999999999999998 899999999999999999999444
No 5
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-39 Score=319.26 Aligned_cols=220 Identities=21% Similarity=0.304 Sum_probs=205.5
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
+++.+|.+|+||||+||..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .++..
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~ 76 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVD-----PKDAE 76 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCC-----CCCTT
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC-----CCCCC
Confidence 5788999999999999999999999999999998 89999999999999999999999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhh
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQY 174 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 174 (654)
|.||||+|+..|+.+++++|++.++.+++.+|..|.||||+|+..+ +.+++++|++.|++++..
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~--------- 140 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK-------HVDLVKLLLSKGSDINIR--------- 140 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTTCC---------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC-------CHHHHHHHHHCCCCCCcc---------
Confidence 9999999999999999999999996669999999999999999999 888988888776554321
Q ss_pred hhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCC
Q 038131 175 QLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPP 254 (654)
Q Consensus 175 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (654)
T Consensus 141 -------------------------------------------------------------------------------- 140 (237)
T 3b7b_A 141 -------------------------------------------------------------------------------- 140 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCC
Q 038131 255 NYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETS 334 (654)
Q Consensus 255 ~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~ 334 (654)
T Consensus 141 -------------------------------------------------------------------------------- 140 (237)
T 3b7b_A 141 -------------------------------------------------------------------------------- 140 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHH
Q 038131 335 PYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQL 414 (654)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~ 414 (654)
|..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+++|+.+++++
T Consensus 141 ------------------------~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 195 (237)
T 3b7b_A 141 ------------------------DNEENICLHWAAFSGCVDIAEILLAA-KCDLHAVNIHGDSPLHIAARENRYDCVVL 195 (237)
T ss_dssp ------------------------CTTSCCHHHHHHHHCCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ------------------------CCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhCCHhHHHH
Confidence 24688999999999999999999997 88999999999999999999999999999
Q ss_pred HHhcCcccccccccccCCCCcHhHHHhhcCC
Q 038131 415 LLKTTIMKDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 415 Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
|+++++ +++.+|.+|+||||+|+..|+
T Consensus 196 Ll~~ga----d~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 196 FLSRDS----DVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HHTTTC----CTTCCCTTSCCHHHHSCTTCH
T ss_pred HHHcCC----CCCccCCCCCCHHHHHHHHHH
Confidence 999998 999999999999999999887
No 6
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.4e-40 Score=341.73 Aligned_cols=289 Identities=17% Similarity=0.133 Sum_probs=232.8
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCC-CCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 21 ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNH-ENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 21 ~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~-~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
.+|+||||.|+..|+.++|++||++|++ +|.+|. .|+||||+||..|+.++|++|+++|++++ .++..+.+|+
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~-----~~~~~~~~~~ 96 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-----LRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchh-----hhccCCCchh
Confidence 4589999999999999999999999998 888876 59999999999999999999999999998 8999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhc
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETS 179 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~ 179 (654)
|.++..++.+++..+++.+++ ++.+|..|.||||+|+..| +.++++.|+++|++++....... .....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~-------~~~~~~~ll~~ga~~~~~~~~~~----~~~~~ 164 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYG-------KVKALKFLYKRGANVNLRRKTKE----DQERL 164 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCCCC---------C
T ss_pred HHHHhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcC-------cHHHHHHHHHcCCCcchhhcccc----ccccc
Confidence 999999999999999999987 9999999999999999999 89999999999999876553211 01111
Q ss_pred cccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchh
Q 038131 180 KKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTC 259 (654)
Q Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 259 (654)
+..|.+|+++++..
T Consensus 165 ~~~g~T~L~~A~~~------------------------------------------------------------------ 178 (337)
T 4g8k_A 165 RKGGATALMDAAEK------------------------------------------------------------------ 178 (337)
T ss_dssp TTCSCCHHHHHHHH------------------------------------------------------------------
T ss_pred cCCCCcHHHHHHHC------------------------------------------------------------------
Confidence 22333443333222
Q ss_pred hHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHc-c-ccccccCCCCCCCCCCCCccccCCCCCCC
Q 038131 260 FEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRR-A-SLYEYDDDGGKPLRRPSSQAEEDETSPYP 337 (654)
Q Consensus 260 ~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~-~-~~~~~d~~g~tpLh~a~~~~~~~~~~~~~ 337 (654)
++ .++++.|+++ + ..+..|..|+||+|.++.....
T Consensus 179 ---------------------------------g~---~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~------- 215 (337)
T 4g8k_A 179 ---------------------------------GH---VEVLKILLDEMGADVNACDNMGRNALIHALLSSDD------- 215 (337)
T ss_dssp ---------------------------------TC---HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT-------
T ss_pred ---------------------------------CC---HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc-------
Confidence 22 5677777754 3 5566777788877765543221
Q ss_pred ccCCCCchhhhccccCCC--ccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHH
Q 038131 338 IVDGGDTDAVLEGKTGST--IPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLL 415 (654)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~--~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~L 415 (654)
......++.+++.+. +.+|..|+||||+|+..|+.++++.|++..+.+++.+|.+|+||||+|+++|+.++|++|
T Consensus 216 ---~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~L 292 (337)
T 4g8k_A 216 ---SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELL 292 (337)
T ss_dssp ---TTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred ---ccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 122234444444443 456788999999999999999999999987899999999999999999999999999999
Q ss_pred HhcCcccccccccccCCCCcHhHHHhhcCCCCC
Q 038131 416 LKTTIMKDSVFRKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 416 l~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
+++|+ ++|. .||||+|++.|+.++
T Consensus 293 l~~GA----d~n~-----~~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 293 CKRGA----STDC-----GDLVMTARRNYDHSL 316 (337)
T ss_dssp HTTSC----SSTT-----CCHHHHHHHTTCHHH
T ss_pred HHCCC----CCCC-----CCHHHHHHHcCCHHH
Confidence 99998 6654 469999999998544
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=7.4e-39 Score=320.52 Aligned_cols=210 Identities=18% Similarity=0.201 Sum_probs=185.0
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHC 101 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~ 101 (654)
+|+||||+||..|+.+++++|++.+++ ++.+|.+|.||||+||..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~ 75 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-----GVTADWHTPLFN 75 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCCCCCHHHH
Confidence 689999999999999999999999988 99999999999999999999999999999999998 899999999999
Q ss_pred HHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccc
Q 038131 102 AISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKK 181 (654)
Q Consensus 102 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (654)
|+..|+.+++++|++++++ ++. +.+|.||||+|+..| +.++++.|+++|++++..+
T Consensus 76 A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~~--------------- 131 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRG-------HVECVNSLIAYGGNIDHKI--------------- 131 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCC-SSC-SCTTCCHHHHHHHTT-------CHHHHHHHHHTTCCTTCCB---------------
T ss_pred HHHcCCHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcC-------cHHHHHHHHHcCCCCCcCC---------------
Confidence 9999999999999999987 664 556999999999999 8899999988776554322
Q ss_pred cCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhH
Q 038131 182 QTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFE 261 (654)
Q Consensus 182 ~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 261 (654)
T Consensus 132 -------------------------------------------------------------------------------- 131 (261)
T 2xai_A 132 -------------------------------------------------------------------------------- 131 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCC
Q 038131 262 FVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDG 341 (654)
Q Consensus 262 ~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~ 341 (654)
T Consensus 132 -------------------------------------------------------------------------------- 131 (261)
T 2xai_A 132 -------------------------------------------------------------------------------- 131 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcc
Q 038131 342 GDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIM 421 (654)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~ 421 (654)
..|+||||+|+..|+.+++++|++. +.+++. |..|+||||+|++.|+.+++++|++.++
T Consensus 132 ------------------~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ga- 190 (261)
T 2xai_A 132 ------------------SHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGA- 190 (261)
T ss_dssp ------------------TTTBCHHHHHHHTTCHHHHHHHHHH-TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTC-
T ss_pred ------------------CCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCC-
Confidence 3577889999988998999988887 677774 8888899999998899999999988887
Q ss_pred cccccccccCCCCcHhHHHhhcCC
Q 038131 422 KDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 422 ~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
+++.+|.+|+||||+|+..++
T Consensus 191 ---d~~~~d~~g~tpl~~A~~~~~ 211 (261)
T 2xai_A 191 ---DTQAKNAEGKRPVELVPPESP 211 (261)
T ss_dssp ---CTTCCCTTSCCGGGGSCTTCT
T ss_pred ---CCCCcCCCCCChhhhcccccc
Confidence 888888899999999886665
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=4.4e-39 Score=325.56 Aligned_cols=221 Identities=17% Similarity=0.130 Sum_probs=177.4
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHhhCCc--cccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCC
Q 038131 16 LKIGDERGSTPLHIAAGLGNVSMCKCIATADPR--LIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRN 93 (654)
Q Consensus 16 l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~--~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 93 (654)
++.+|.+|+||||+||..|+.++|++|++.+++ .++.+|..|+||||+||..|+.+++++|+++|++++ .+|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~ 76 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL-----VAER 76 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-----CCCT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCC
Confidence 678999999999999999999999999998876 378999999999999999999999999999999998 8999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhccc----------------------------------------------ccccccc
Q 038131 94 EGDTVLHCAISGDYFDLAFQIIHRCEK----------------------------------------------LVNSVNE 127 (654)
Q Consensus 94 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~----------------------------------------------~~~~~d~ 127 (654)
.|.||||+|+..|+.+++++|++.++. +++.+|.
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCT
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCC
Confidence 999999999999999999999997754 1444555
Q ss_pred CCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHh
Q 038131 128 QGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLS 207 (654)
Q Consensus 128 ~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~ 207 (654)
.|.||||+|+..| +.+++++|+++|++++..+
T Consensus 157 ~g~t~L~~A~~~g-------~~~~v~~Ll~~g~~~~~~~----------------------------------------- 188 (282)
T 1oy3_D 157 DGHTPLHVAVIHK-------DAEMVRLLRDAGADLNKPE----------------------------------------- 188 (282)
T ss_dssp TSCCHHHHHHHTT-------CHHHHHHHHHHTCCTTCCC-----------------------------------------
T ss_pred CCcCHHHHHHHcC-------CHHHHHHHHHcCCCCCCCC-----------------------------------------
Confidence 5666666666655 5555555555444332111
Q ss_pred cCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHH
Q 038131 208 NRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKI 287 (654)
Q Consensus 208 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~ 287 (654)
T Consensus 189 -------------------------------------------------------------------------------- 188 (282)
T 1oy3_D 189 -------------------------------------------------------------------------------- 188 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHH
Q 038131 288 REKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPIL 367 (654)
Q Consensus 288 ~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh 367 (654)
+..|+||||
T Consensus 189 -----------------------------------------------------------------------~~~g~tpL~ 197 (282)
T 1oy3_D 189 -----------------------------------------------------------------------PTCGRTPLH 197 (282)
T ss_dssp -----------------------------------------------------------------------TTTCCCHHH
T ss_pred -----------------------------------------------------------------------CCCCcCHHH
Confidence 124899999
Q ss_pred HHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCC
Q 038131 368 IAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 368 ~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
+|+..|+.++|++|+++ +.+++.+|..|+||||+|+++|+.+++++|+++|+ +++.+|.+|.|||++|....+
T Consensus 198 ~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNPILARLLRAHGA----PEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC----CCCCCC---------------
T ss_pred HHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCC----CcCcCCCcccccccccCCccc
Confidence 99999999999999997 89999999999999999999999999999999998 999999999999999998665
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.9e-39 Score=316.78 Aligned_cols=224 Identities=17% Similarity=0.169 Sum_probs=200.2
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHh----hCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCcccc
Q 038131 16 LKIGDERGSTPLHIAAGLGNVSMCKCIAT----ADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSR 91 (654)
Q Consensus 16 l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~----~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~ 91 (654)
++.+|.+|+||||+||..|+.+++++|++ .+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~ 75 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPM-----AL 75 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----cc
Confidence 56789999999999999999999999997 4555 99999999999999999999999999999999998 88
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhccc---cccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchh
Q 038131 92 RNEGDTVLHCAISGDYFDLAFQIIHRCEK---LVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEE 168 (654)
Q Consensus 92 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 168 (654)
|..|.||||+|+..|+.+++++|++.++. +++.+|..|.||||+|+..+ +.+++++|++.|++++..+
T Consensus 76 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~~-- 146 (241)
T 1k1a_A 76 DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE-------CQETVQLLLERGADIDAVD-- 146 (241)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHT-------CHHHHHHHHHTTCCTTCCC--
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcC-------CHHHHHHHHHcCCCccccc--
Confidence 99999999999999999999999999872 48899999999999999998 8889888887765543221
Q ss_pred hhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCC
Q 038131 169 TSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQG 248 (654)
Q Consensus 169 ~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 248 (654)
T Consensus 147 -------------------------------------------------------------------------------- 146 (241)
T 1k1a_A 147 -------------------------------------------------------------------------------- 146 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCcc
Q 038131 249 HQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQA 328 (654)
Q Consensus 249 ~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~ 328 (654)
T Consensus 147 -------------------------------------------------------------------------------- 146 (241)
T 1k1a_A 147 -------------------------------------------------------------------------------- 146 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCC
Q 038131 329 EEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQ 408 (654)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~ 408 (654)
+..|.||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+.+|+
T Consensus 147 ------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 147 ------------------------------IKSGRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp ------------------------------TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTC
T ss_pred ------------------------------ccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCC
Confidence 03588999999999999999999997 89999999999999999999999
Q ss_pred hHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCCc
Q 038131 409 PHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKPW 449 (654)
Q Consensus 409 ~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~~ 449 (654)
.+++++|+++++ +++.+|..|+||||+|++.|+.+++
T Consensus 196 ~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~~~i~ 232 (241)
T 1k1a_A 196 LPLVRTLVRSGA----DSSLKNCHNDTPLMVARSRRVIDIL 232 (241)
T ss_dssp HHHHHHHHHTTC----CTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred HHHHHHHHhcCC----CCCCcCCCCCCHHHHHHhcCcHHHH
Confidence 999999999998 9999999999999999998875443
No 10
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-38 Score=317.44 Aligned_cols=149 Identities=22% Similarity=0.197 Sum_probs=137.1
Q ss_pred hhHHHHHhcccccccccC-CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc
Q 038131 2 DLVGIIQEKQQLKVLKIG-DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC 80 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~-d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 80 (654)
++|+.|+++|. +++.+ +..|+||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+..|+.+++++|+++|
T Consensus 19 ~~v~~Ll~~g~--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 95 (285)
T 1wdy_A 19 DLVQQLLEGGA--NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95 (285)
T ss_dssp HHHHHHHHTTC--CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCC--CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 68999999987 68877 78899999999999999999999999998 8999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcccccccc----------ccCCCCHHHHHhcCCCCCccCCchH
Q 038131 81 ASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSV----------NEQGVSPLHLLATKPNAFRSGSHLG 150 (654)
Q Consensus 81 ~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~----------d~~g~TpLh~A~~~~~~~~~~~~~~ 150 (654)
++++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+ +..|.||||+|+..| +.+
T Consensus 96 ~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~ 162 (285)
T 1wdy_A 96 ADVN-----ECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKG-------HVE 162 (285)
T ss_dssp CCTT-----CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHT-------CHH
T ss_pred CCCC-----ccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHcC-------CHH
Confidence 9998 8999999999999999999999999999987 7766 788999999999999 899
Q ss_pred HHHHHhhc-cCcccccc
Q 038131 151 LCTGIIYH-CISVDKLQ 166 (654)
Q Consensus 151 ~v~~Ll~~-~~~~~~~~ 166 (654)
++++|++. +.+++..+
T Consensus 163 ~v~~Ll~~~~~~~~~~~ 179 (285)
T 1wdy_A 163 VLKILLDEMGADVNACD 179 (285)
T ss_dssp HHHHHHHTSCCCTTCCC
T ss_pred HHHHHHHhcCCCCCccC
Confidence 99999986 77766544
No 11
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=319.02 Aligned_cols=215 Identities=19% Similarity=0.195 Sum_probs=196.8
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
.++.+|..|+||||+||..|+.+++++|++.+++ ++.+|.+|+||||+||..|+.+++++|+++|++++ .+|..
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~ 124 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVN-----GVTAD 124 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSS-----CCCTT
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC-----CCCCC
Confidence 4678899999999999999999999999999988 99999999999999999999999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhh
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQY 174 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 174 (654)
|.||||+|+..|+.+++++|++.+++ ++.. .+|.||||+|+..| +.+++++|++.|++++..
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~-~~g~t~L~~A~~~g-------~~~~v~~Ll~~g~~~~~~--------- 186 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHGAS-VQPE-SDLASPIHEAARRG-------HVECVNSLIAYGGNIDHK--------- 186 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCC-SSCS-CTTSCHHHHHHHHT-------CHHHHHHHHHTTCCTTCC---------
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCCCC-CCCC-CCCCCHHHHHHHcC-------CHHHHHHHHHCCCCCCCc---------
Confidence 99999999999999999999999887 6654 45999999999999 888988888776554322
Q ss_pred hhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCC
Q 038131 175 QLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPP 254 (654)
Q Consensus 175 ~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (654)
T Consensus 187 -------------------------------------------------------------------------------- 186 (285)
T 3d9h_A 187 -------------------------------------------------------------------------------- 186 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCC
Q 038131 255 NYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETS 334 (654)
Q Consensus 255 ~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~ 334 (654)
T Consensus 187 -------------------------------------------------------------------------------- 186 (285)
T 3d9h_A 187 -------------------------------------------------------------------------------- 186 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHH
Q 038131 335 PYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQL 414 (654)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~ 414 (654)
|..|+||||+|+..|+.+++++|++. +.+++. |..|+||||+|++.|+.+++++
T Consensus 187 ------------------------d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~-~~~g~t~L~~A~~~~~~~~v~~ 240 (285)
T 3d9h_A 187 ------------------------ISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSPLHAVVRTASEELACL 240 (285)
T ss_dssp ------------------------BTTTBCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CBTTBCHHHHHHHTTCHHHHHH
T ss_pred ------------------------CCCCCCHHHHHHHcCcHHHHHHHHHC-CCCCCC-CCCCCCHHHHHHHcCCHHHHHH
Confidence 24688999999999999999999997 777774 8999999999999999999999
Q ss_pred HHhcCcccccccccccCCCCcHhHHHhhc
Q 038131 415 LLKTTIMKDSVFRKVDDQGNSALHLAATL 443 (654)
Q Consensus 415 Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~ 443 (654)
|++.++ +++.+|.+|+||||+|+..
T Consensus 241 Ll~~ga----d~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 241 LMDFGA----DTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp HHHTTC----CTTCCCTTSCCGGGGSCTT
T ss_pred HHHCCC----CCCCcCCCCCCHHHHhcCc
Confidence 999998 9999999999999999943
No 12
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.3e-38 Score=326.69 Aligned_cols=271 Identities=18% Similarity=0.146 Sum_probs=229.8
Q ss_pred hhHHHHHhcccccccccCCC-CCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc
Q 038131 2 DLVGIIQEKQQLKVLKIGDE-RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC 80 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~-~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 80 (654)
++|++|+++|+ ++|.+|. .|+||||+||..|+.++|++||+.|++ ++.+|..+.+|++.++..++.+++..+++.+
T Consensus 39 ~~V~~LL~~Ga--dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (337)
T 4g8k_A 39 DLVQQLLEGGA--NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFILAAIAGSVKLLKLFLSKG 115 (337)
T ss_dssp HHHHHHHHHTC--CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHCCC--CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccCCCchhHHHHhcccchhhHHhhhcc
Confidence 68999999998 7998876 499999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccc----------cccCCCCHHHHHhcCCCCCccCCchH
Q 038131 81 ASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNS----------VNEQGVSPLHLLATKPNAFRSGSHLG 150 (654)
Q Consensus 81 ~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~----------~d~~g~TpLh~A~~~~~~~~~~~~~~ 150 (654)
++++ .+|..|.||||+|+..|+.+++++|++.+++ ++. .+..|.||||+|+..| +.+
T Consensus 116 ~~~~-----~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~-~~~~~~~~~~~~~~~~~g~T~L~~A~~~g-------~~~ 182 (337)
T 4g8k_A 116 ADVN-----ECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKG-------HVE 182 (337)
T ss_dssp CCTT-----CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCC-----CTTCSCCHHHHHHHHT-------CHH
T ss_pred chhh-----hhccCCCCHHHHHHHcCcHHHHHHHHHcCCC-cchhhccccccccccCCCCcHHHHHHHCC-------CHH
Confidence 9998 8999999999999999999999999999886 443 4567999999999999 999
Q ss_pred HHHHHhh-ccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCC
Q 038131 151 LCTGIIY-HCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKG 229 (654)
Q Consensus 151 ~v~~Ll~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~ 229 (654)
++++|++ .|++++..+. .|.+|..+.....
T Consensus 183 ~v~~LL~~~gad~n~~d~--------------~g~t~l~~~~~~~----------------------------------- 213 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDN--------------MGRNALIHALLSS----------------------------------- 213 (337)
T ss_dssp HHHHHHHHSCCCTTCCCT--------------TSCCHHHHHHHHS-----------------------------------
T ss_pred HHHHHHhccCCCcCccCC--------------CCCcHHHHHHHHc-----------------------------------
Confidence 9999996 5888876663 2333333221100
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHcc-
Q 038131 230 IDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRA- 308 (654)
Q Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~- 308 (654)
. ......+++.|++++
T Consensus 214 -------------------------------------------------------------~--~~~~~~i~~lLl~~ga 230 (337)
T 4g8k_A 214 -------------------------------------------------------------D--DSDVEAITHLLLDHGA 230 (337)
T ss_dssp -------------------------------------------------------------C--TTTHHHHHHHHHHTTC
T ss_pred -------------------------------------------------------------C--cccHHHHHHHHHHCCC
Confidence 0 001145778888888
Q ss_pred ccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccC---CCccccCCCCcHHHHHHHcChHHHHHHHHHHC
Q 038131 309 SLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTG---STIPDMAKRETPILIAAKNGITEIVEKILESF 385 (654)
Q Consensus 309 ~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~ 385 (654)
..+..|.+|+||||+|+. .+..+.+..++.. ..+.+|.+|+||||+|++.|+.++|++||++
T Consensus 231 d~n~~d~~g~t~L~~a~~--------------~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~- 295 (337)
T 4g8k_A 231 DVNVRGERGKTPLILAVE--------------KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR- 295 (337)
T ss_dssp CTTCCCGGGCCHHHHHHH--------------TTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT-
T ss_pred CCCCcCCCCCCHHHHHHH--------------hhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC-
Confidence 677789999999999987 5666777766653 3467789999999999999999999999997
Q ss_pred CCccccccCCCCchhHHHHHcCChHHHHHHHhcCc
Q 038131 386 PVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 386 ~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~ 420 (654)
+++++ ++||||+|+++|+.++|++|+++|+
T Consensus 296 GAd~n-----~~~~L~~A~~~~~~~iv~~Ll~~GA 325 (337)
T 4g8k_A 296 GASTD-----CGDLVMTARRNYDHSLVKVLLSHGA 325 (337)
T ss_dssp SCSST-----TCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCC-----CCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 77654 5679999999999999999999998
No 13
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.6e-38 Score=305.45 Aligned_cols=214 Identities=19% Similarity=0.192 Sum_probs=193.6
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccc-cCCCCCcHHHH
Q 038131 23 GSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYS-RRNEGDTVLHC 101 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~-~~~~g~T~Lh~ 101 (654)
|+||||+||..|+.++++.|++.+++..+.+|.+|+||||+|+..|+.+++++|+++|++++ ++. .+..|.||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN---LDDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC---GGGCCCTTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc---ccccCCCCCCCHHHH
Confidence 78999999999999999999999999777799999999999999999999999999996554 224 78899999999
Q ss_pred HHHcCCHHHHHHHHHhc--cccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhc
Q 038131 102 AISGDYFDLAFQIIHRC--EKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETS 179 (654)
Q Consensus 102 A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~ 179 (654)
|+..|+.+++++|++.+ ++ ++.+|..|.||||+|+..+ +.+++++|+++|++++..
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~-------------- 136 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKK-------WFEVSQFLIENGASVRIK-------------- 136 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTT-------CHHHHHHHHHTTCCSCCC--------------
T ss_pred HHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcC-------CHhHHHHHHHcCCCcccc--------------
Confidence 99999999999999998 55 8999999999999999999 888988888776554322
Q ss_pred cccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchh
Q 038131 180 KKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTC 259 (654)
Q Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 259 (654)
T Consensus 137 -------------------------------------------------------------------------------- 136 (228)
T 2dzn_A 137 -------------------------------------------------------------------------------- 136 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCcc
Q 038131 260 FEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIV 339 (654)
Q Consensus 260 ~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~ 339 (654)
T Consensus 137 -------------------------------------------------------------------------------- 136 (228)
T 2dzn_A 137 -------------------------------------------------------------------------------- 136 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHH-hc
Q 038131 340 DGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLL-KT 418 (654)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll-~~ 418 (654)
|..|+||||+|+..|+.+++++|++..+.+++.+|..|+||||+|+..|+.+++++|+ +.
T Consensus 137 -------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ 197 (228)
T 2dzn_A 137 -------------------DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY 197 (228)
T ss_dssp -------------------CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------------------CCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 2468899999999999999999999855999999999999999999999999999999 88
Q ss_pred CcccccccccccCCCCcHhHHHhhcC
Q 038131 419 TIMKDSVFRKVDDQGNSALHLAATLG 444 (654)
Q Consensus 419 ~~~~~~~~~~~D~~G~TpLh~Aa~~g 444 (654)
++ +++.+|.+|+||||+|++.+
T Consensus 198 ga----~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 198 GA----EYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp CC----CSCCBCTTSCBGGGGCSSTT
T ss_pred CC----CCCccCCCCCcHHHHHHHHH
Confidence 87 99999999999999998654
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=310.91 Aligned_cols=230 Identities=17% Similarity=0.137 Sum_probs=207.0
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|. +++.+|.+|+||||+||..|+.+++++|++.|++ ++.+|.+|+||||+|+..|+.+++++|+++|+
T Consensus 17 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 17 LSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp HHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 68999999987 7999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .+.+|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.++++.|++.|++
T Consensus 94 ~~~------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~ 159 (261)
T 2xai_A 94 SVQ------PESDLASPIHEAARRGHVECVNSLIAYGGN-IDHKISHLGTPLYLACENQ-------QRACVKKLLESGAD 159 (261)
T ss_dssp CSS------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTT-------CHHHHHHHHHHTCC
T ss_pred CCC------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHhC-------CHHHHHHHHHcCCC
Confidence 986 456799999999999999999999999987 9999999999999999999 88899888877655
Q ss_pred ccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCccc
Q 038131 162 VDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESR 241 (654)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (654)
++.
T Consensus 160 ~~~----------------------------------------------------------------------------- 162 (261)
T 2xai_A 160 VNQ----------------------------------------------------------------------------- 162 (261)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 531
Q ss_pred ccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCC
Q 038131 242 HNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPL 321 (654)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpL 321 (654)
T Consensus 163 -------------------------------------------------------------------------------- 162 (261)
T 2xai_A 163 -------------------------------------------------------------------------------- 162 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhH
Q 038131 322 RRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVL 401 (654)
Q Consensus 322 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh 401 (654)
+..|.||||+|+..|+.+++++|++. +.+++.+|.+|+||||
T Consensus 163 -------------------------------------~~~g~t~Lh~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpl~ 204 (261)
T 2xai_A 163 -------------------------------------GKGQDSPLHAVARTASEELACLLMDF-GADTQAKNAEGKRPVE 204 (261)
T ss_dssp -------------------------------------CBTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCGGG
T ss_pred -------------------------------------CCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCChhh
Confidence 13578999999999999999999997 8999999999999999
Q ss_pred HHHHcCChHHHHHHHhcCcccc----cccccccCCCCcHhHHHhhcCC
Q 038131 402 LAVENRQPHVYQLLLKTTIMKD----SVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 402 ~Av~~~~~~iv~~Ll~~~~~~~----~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
+|+.++ +++++|++.+.... .+++.+|..|+||||+|++...
T Consensus 205 ~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~ 250 (261)
T 2xai_A 205 LVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVL 250 (261)
T ss_dssp GSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSS
T ss_pred hccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCC
Confidence 999655 59999999865221 2567899999999999998665
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=318.06 Aligned_cols=217 Identities=18% Similarity=0.204 Sum_probs=170.9
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHhhCCcc-------ccCCCCCCChHHHHHHHcCCH-HHHHHHHhhcCCCCCCCcc
Q 038131 18 IGDERGSTPLHIAAGLGNVSMCKCIATADPRL-------IGERNHENETPFFLAALHGHK-DAFLCLHYLCASVDDGYTY 89 (654)
Q Consensus 18 ~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~-------~~~~d~~G~TpLh~Aa~~g~~-~iv~~Ll~~g~~~~~~~~~ 89 (654)
.+|.++.||||.||..|+.++|++||+.+++. ++..|..|.||||.|+..++. .++++|++.|+++|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn----- 80 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVN----- 80 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTT-----
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCC-----
Confidence 46778899999999999999999999988752 566788899999999998876 58999999999998
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhh
Q 038131 90 SRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEET 169 (654)
Q Consensus 90 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 169 (654)
.+|.+|.||||+|+..|+.+++++|++.+++ ++.++.+|.||+|+|+..+ +.++++.|++.|++++..
T Consensus 81 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~-------~~~~~~~Ll~~g~~~n~~---- 148 (269)
T 4b93_B 81 VTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQG-------HFQVVKCLLDSNAKPNKK---- 148 (269)
T ss_dssp CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHT-------CHHHHHHHHHTTCCSCCC----
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccC-------hHHHHHHHHHCCCCCCCC----
Confidence 8999999999999999999999999999998 9999999999999999998 788888888776655422
Q ss_pred hhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCC
Q 038131 170 SYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGH 249 (654)
Q Consensus 170 ~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 249 (654)
T Consensus 149 -------------------------------------------------------------------------------- 148 (269)
T 4b93_B 149 -------------------------------------------------------------------------------- 148 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccc
Q 038131 250 QFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAE 329 (654)
Q Consensus 250 ~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~ 329 (654)
T Consensus 149 -------------------------------------------------------------------------------- 148 (269)
T 4b93_B 149 -------------------------------------------------------------------------------- 148 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCCh
Q 038131 330 EDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQP 409 (654)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~ 409 (654)
|..|+||||+||..|+.++|++||+. +.+++.+|..|+||||+|+.+|+.
T Consensus 149 -----------------------------d~~g~TpL~~A~~~g~~~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g~~ 198 (269)
T 4b93_B 149 -----------------------------DLSGNTPLIYACSGGHHELVALLLQH-GASINASNNKGNTALHEAVIEKHV 198 (269)
T ss_dssp -----------------------------CTTCCCHHHHHHHTTCGGGHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred -----------------------------CCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCccccCCCcHHHHHHHcCCH
Confidence 24689999999999999999999996 899999999999999999999999
Q ss_pred HHHHHHHhcCcccccccccccCCCCcHhHHHhhcCC
Q 038131 410 HVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 410 ~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
++|++|+++|+ +++.+|++|+||||+|+++++
T Consensus 199 ~~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 199 FVVELLLLHGA----SVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHHHHTTC----CSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHHCCC----CCCCcCCCCCCHHHHHHhCCc
Confidence 99999999998 999999999999999998776
No 16
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.3e-38 Score=331.15 Aligned_cols=263 Identities=16% Similarity=0.135 Sum_probs=212.2
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCC-CCCChHHHHHHHcCCHHHHHHHH--------hhcCCCCCC
Q 038131 16 LKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERN-HENETPFFLAALHGHKDAFLCLH--------YLCASVDDG 86 (654)
Q Consensus 16 l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~iv~~Ll--------~~g~~~~~~ 86 (654)
.+.+|..|+||||+||..|+ ++++.|+.. + ++.+| ..|+||||+||..|+.+++++|+ +.|++++
T Consensus 87 ~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~--~-~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn-- 160 (373)
T 2fo1_E 87 PTEPEPESPIKLHTEAAGSY-AITEPITRE--S-VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVN-- 160 (373)
T ss_dssp -------CCCHHHHHHHSSS-CCCSCCSTT--T-TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTT--
T ss_pred ccCCCCCCccHHHHHhcCCc-hHHHHhccc--c-ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCc--
Confidence 34578899999999999654 788888653 3 77888 78999999999999998888776 7899988
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhcc---Cccc
Q 038131 87 YTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC---ISVD 163 (654)
Q Consensus 87 ~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~---~~~~ 163 (654)
.+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..| +.+++++|++.+ .+++
T Consensus 161 ---~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~~~~~~~~~ 229 (373)
T 2fo1_E 161 ---AMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANR-------DFGMMVYMLNSTKLKGDIE 229 (373)
T ss_dssp ---CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTT-------CHHHHHHHTTSHHHHHTTS
T ss_pred ---CCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCC-------CHHHHHHHHhcCccccChh
Confidence 8999999999999999999999999999988 9999999999999999999 899999999988 6777
Q ss_pred ccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCccccc
Q 038131 164 KLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHN 243 (654)
Q Consensus 164 ~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (654)
..+. .|.+|+++++..+
T Consensus 230 ~~d~--------------~g~t~L~~A~~~~------------------------------------------------- 246 (373)
T 2fo1_E 230 ELDR--------------NGMTALMIVAHNE------------------------------------------------- 246 (373)
T ss_dssp CCCT--------------TSCCHHHHHHHSC-------------------------------------------------
T ss_pred hcCC--------------CCCCHHHHHHHhC-------------------------------------------------
Confidence 7663 3455555443311
Q ss_pred CCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCC
Q 038131 244 FGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRR 323 (654)
Q Consensus 244 ~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~ 323 (654)
.....++++.|++.+...... +
T Consensus 247 --------------------------------------------------~~~~~~~v~~Ll~~g~~~~~~--~------ 268 (373)
T 2fo1_E 247 --------------------------------------------------GRDQVASAKLLVEKGAKVDYD--G------ 268 (373)
T ss_dssp --------------------------------------------------STTHHHHHHHHHHHTCCSSCC--S------
T ss_pred --------------------------------------------------CcchHHHHHHHHHCCCCcccc--c------
Confidence 000156777787775221110 0
Q ss_pred CCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHH
Q 038131 324 PSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLA 403 (654)
Q Consensus 324 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~A 403 (654)
....+..|..|.||||+|+..|+.++|++|++..+.+++.+|.+|+||||+|
T Consensus 269 ----------------------------~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A 320 (373)
T 2fo1_E 269 ----------------------------AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLA 320 (373)
T ss_dssp ----------------------------GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHH
T ss_pred ----------------------------ccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHH
Confidence 0001234568999999999999999999999987799999999999999999
Q ss_pred HHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCC
Q 038131 404 VENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 404 v~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
+.+|+.++|++|+++++ +++.+|..|+||||+|+..|+.++
T Consensus 321 ~~~g~~~iv~~Ll~~ga----d~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 321 AQEGRIEVVMYLIQQGA----SVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp HHHTCHHHHHHHHHTTC----CSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHcCC----CccCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999998 999999999999999999998443
No 17
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.6e-37 Score=303.15 Aligned_cols=215 Identities=19% Similarity=0.192 Sum_probs=198.9
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
+..++||||.||..|+.+.++.|++.++..++.+|.+|.||||+|+..|+.+++++|+++|++++ .+|..|.|||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~g~t~L 77 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVN-----DKDDAGWSPL 77 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-----CCCTTSCCHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCC-----CcCCCCCCHH
Confidence 45689999999999999999999999988889999999999999999999999999999999998 8999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhc
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETS 179 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~ 179 (654)
|+|+..|+.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|++.|++++.
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~--------------- 134 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKN-------RHEIAVMLLEGGANPDA--------------- 134 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTTC---------------
T ss_pred HHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCCC---------------
Confidence 999999999999999999987 9999999999999999999 88888888876654432
Q ss_pred cccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchh
Q 038131 180 KKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTC 259 (654)
Q Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 259 (654)
T Consensus 135 -------------------------------------------------------------------------------- 134 (231)
T 3aji_A 135 -------------------------------------------------------------------------------- 134 (231)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCcc
Q 038131 260 FEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIV 339 (654)
Q Consensus 260 ~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~ 339 (654)
T Consensus 135 -------------------------------------------------------------------------------- 134 (231)
T 3aji_A 135 -------------------------------------------------------------------------------- 134 (231)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcC
Q 038131 340 DGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTT 419 (654)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~ 419 (654)
.|..|.||||.|+..|+.+++++|++. +.+++.+|..|+||||+|+.+|+.+++++|++++
T Consensus 135 ------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 195 (231)
T 3aji_A 135 ------------------KDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG 195 (231)
T ss_dssp ------------------CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ------------------cCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCC
Confidence 124588999999999999999999996 8899999999999999999999999999999999
Q ss_pred cccccccccccCCCCcHhHHHhhcCC
Q 038131 420 IMKDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 420 ~~~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
+ +++.+|..|+||||+|++.++
T Consensus 196 a----~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 196 A----SIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp C----CSCCCCTTSCCHHHHSCHHHH
T ss_pred C----CCCCCCCCCCCHHHHHHhhHH
Confidence 8 899999999999999998766
No 18
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=5.1e-37 Score=313.43 Aligned_cols=237 Identities=17% Similarity=0.221 Sum_probs=200.3
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
+.+|.||||.||..|+.++|++|++.|++ ++.+|.+|.||||+||..|+.+++++|+++|++++ .+|..|.|||
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~g~tpL 110 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANIN-----QPDNEGWIPL 110 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCCCCcHH
Confidence 45688999999999999999999999998 99999999999999999999999999999999998 8999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhc-cCcccccchhhhhhhhhhhh
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYH-CISVDKLQEETSYDQYQLET 178 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~l~~ 178 (654)
|+|+..|+.+++++|++++++ ++.+|.+|.||||+|+..+ +.++++.++.. +.+++.....
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~-------~~~~~~~ll~~~~~~~~~~~~~---------- 172 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEA-------MEELLQNEVNRQGVDIEAARKE---------- 172 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHH-------HHHHHHHHHHHHTCCHHHHHHH----------
T ss_pred HHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcc-------hHHHHHHHHhhcCCCchhhhhh----------
Confidence 999999999999999999987 9999999999999999988 88888887753 3333221100
Q ss_pred ccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcch
Q 038131 179 SKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGT 258 (654)
Q Consensus 179 ~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 258 (654)
T Consensus 173 -------------------------------------------------------------------------------- 172 (299)
T 1s70_B 173 -------------------------------------------------------------------------------- 172 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCc
Q 038131 259 CFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPI 338 (654)
Q Consensus 259 ~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~ 338 (654)
+. ......+..++..+...
T Consensus 173 ---------------------~~-------------~~~~~~~~~~l~~~~~~--------------------------- 191 (299)
T 1s70_B 173 ---------------------EE-------------RIMLRDARQWLNSGHIN--------------------------- 191 (299)
T ss_dssp ---------------------HH-------------HHHHHHHHHHHHHTCCC---------------------------
T ss_pred ---------------------hh-------------hHHHHHHHHHHhccCcc---------------------------
Confidence 00 00012223333332110
Q ss_pred cCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhc
Q 038131 339 VDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKT 418 (654)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~ 418 (654)
....+..|.||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+.+|+.+++++|+++
T Consensus 192 ----------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 254 (299)
T 1s70_B 192 ----------------DVRHAKSGGTALHVAAAKGYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254 (299)
T ss_dssp ----------------CCCCTTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------------hhhhcCCCCCHHHHHHHCCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence 011235799999999999999999999986 899999999999999999999999999999999
Q ss_pred CcccccccccccCCCCcHhHHHhh
Q 038131 419 TIMKDSVFRKVDDQGNSALHLAAT 442 (654)
Q Consensus 419 ~~~~~~~~~~~D~~G~TpLh~Aa~ 442 (654)
++ +++.+|..|+||||+|++
T Consensus 255 ga----d~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 255 LC----DMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp TC----CTTCCCTTSCCTTTSCCS
T ss_pred CC----CCCCcCCCCCCHHHHHHH
Confidence 98 999999999999999975
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.4e-37 Score=322.08 Aligned_cols=223 Identities=16% Similarity=0.114 Sum_probs=186.5
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
+.+..|.+|+||||+||..|+.++|++|++.|++ ++.+|..|.||||+||..|+.++|++|+++|++++ +.+
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~ 83 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHS-------LWH 83 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCC-------CBT
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcc-------ccC
Confidence 4667899999999999999999999999999988 99999999999999999999999999999999654 457
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHh----ccccccc-----------------cccCCCCHHHHHhcCCCCCccCCchHHHH
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHR----CEKLVNS-----------------VNEQGVSPLHLLATKPNAFRSGSHLGLCT 153 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~----~~~~~~~-----------------~d~~g~TpLh~A~~~~~~~~~~~~~~~v~ 153 (654)
|.||||+|+..|+.+++++|++. +.+ ++. +|..|.||||+|+..|.. +.++++
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~-----~~~~v~ 157 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPE-----YLEMIK 157 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGG-----GHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCc-----hHHHHH
Confidence 99999999999999999999998 554 555 889999999999998721 467777
Q ss_pred HHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCC
Q 038131 154 GIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDS 233 (654)
Q Consensus 154 ~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (654)
+|++.|++++..+
T Consensus 158 ~Ll~~ga~~~~~d------------------------------------------------------------------- 170 (364)
T 3ljn_A 158 ILVQLGASPTAKD------------------------------------------------------------------- 170 (364)
T ss_dssp HHHHHTCCTTCCC-------------------------------------------------------------------
T ss_pred HHHHcCCCCcccC-------------------------------------------------------------------
Confidence 7777665554222
Q ss_pred CCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccc
Q 038131 234 GDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEY 313 (654)
Q Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~ 313 (654)
T Consensus 171 -------------------------------------------------------------------------------- 170 (364)
T 3ljn_A 171 -------------------------------------------------------------------------------- 170 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCc-----
Q 038131 314 DDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVA----- 388 (654)
Q Consensus 314 d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~----- 388 (654)
..|+||||+|+..|+.++|++|++. +.+
T Consensus 171 ----------------------------------------------~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~ 203 (364)
T 3ljn_A 171 ----------------------------------------------KADETPLMRAMEFRNREALDLMMDT-VPSKSSLR 203 (364)
T ss_dssp ----------------------------------------------TTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCC
T ss_pred ----------------------------------------------CCCCCHHHHHHHcCCHHHHHHHHhc-cccccccc
Confidence 4577888888888888888888887 454
Q ss_pred cccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCCc
Q 038131 389 IHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKPW 449 (654)
Q Consensus 389 ~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~~ 449 (654)
++..|..|+||||+|+.+|+.++|++|+++++ +++.+|.+|+||||+|++.|+.+++
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~~g~~~~v 260 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWEDVAMRFVEMGI----DVNMEDNEHTVPLYLSVRAAMVLLT 260 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC----CTTCCCTTSCCHHHHHHHTCCHHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCCHHHHHHHhChHHHH
Confidence 78888888888888888888888888888887 8888888888888888888875443
No 20
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-36 Score=305.65 Aligned_cols=257 Identities=18% Similarity=0.136 Sum_probs=214.6
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCccccCC-CCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 21 ERGSTPLHIAAGLGNVSMCKCIATADPRLIGER-NHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 21 ~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~-d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
.+|+||||.|+..|+.+++++|++.+++ ++.+ +..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~g~t~L 76 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV-----LRKKNGATPF 76 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc-----ccCCCCCCHH
Confidence 4689999999999999999999999998 7766 8889999999999999999999999999998 8999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhc
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETS 179 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~ 179 (654)
|+|+..|+.+++++|++++++ ++.+|..|.||||+|+..| +.+++++|++.|++++....... .....
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~~~~~~----~~~~~ 144 (285)
T 1wdy_A 77 LLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYG-------KVKALKFLYKRGANVNLRRKTKE----DQERL 144 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCCCCH----HHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhC-------CHHHHHHHHHhCCCcccccccHH----HHHhh
Confidence 999999999999999999987 9999999999999999999 89999999999988876542110 00011
Q ss_pred cccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchh
Q 038131 180 KKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTC 259 (654)
Q Consensus 180 ~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 259 (654)
+..|.+|.++++.
T Consensus 145 ~~~g~t~L~~A~~------------------------------------------------------------------- 157 (285)
T 1wdy_A 145 RKGGATALMDAAE------------------------------------------------------------------- 157 (285)
T ss_dssp TCCCCCHHHHHHH-------------------------------------------------------------------
T ss_pred ccCCCcHHHHHHH-------------------------------------------------------------------
Confidence 1222222222211
Q ss_pred hHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHc-cccccccCCCCCCCCCCCCccccCCCCCCCc
Q 038131 260 FEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRR-ASLYEYDDDGGKPLRRPSSQAEEDETSPYPI 338 (654)
Q Consensus 260 ~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~-~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~ 338 (654)
.++ .++++.|++. +.
T Consensus 158 --------------------------------~~~---~~~v~~Ll~~~~~----------------------------- 173 (285)
T 1wdy_A 158 --------------------------------KGH---VEVLKILLDEMGA----------------------------- 173 (285)
T ss_dssp --------------------------------HTC---HHHHHHHHHTSCC-----------------------------
T ss_pred --------------------------------cCC---HHHHHHHHHhcCC-----------------------------
Confidence 111 4566666654 21
Q ss_pred cCCCCchhhhccccCCCccccCCCCcHHHHHHHcCh----HHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHH
Q 038131 339 VDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGI----TEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQL 414 (654)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~----~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~ 414 (654)
..+..|..|+||||.|+..|+ .+++++|++. +.+++.+|..|+||||+|+++|+.+++++
T Consensus 174 ---------------~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 174 ---------------DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp ---------------CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ---------------CCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 112345679999999999999 9999999996 89999999999999999999999999999
Q ss_pred HHh-cCcccccccccccCCCCcHhHHHhhcCCC
Q 038131 415 LLK-TTIMKDSVFRKVDDQGNSALHLAATLGDH 446 (654)
Q Consensus 415 Ll~-~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~ 446 (654)
|++ .+. +++.+|.+|+||||+|++.|+.
T Consensus 238 Ll~~~g~----~~~~~~~~g~t~l~~A~~~~~~ 266 (285)
T 1wdy_A 238 LLEQEHI----EINDTDSDGKTALLLAVELKLK 266 (285)
T ss_dssp HHHSSSC----CTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHhccCC----CccccCCCCCcHHHHHHHcCcH
Confidence 999 666 8999999999999999999983
No 21
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.4e-36 Score=317.08 Aligned_cols=310 Identities=18% Similarity=0.099 Sum_probs=224.1
Q ss_pred hhHHHHHhc-ccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc
Q 038131 2 DLVGIIQEK-QQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC 80 (654)
Q Consensus 2 ~iv~~Ll~~-~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 80 (654)
+.|+.|+.. +. +++.+|..|+||||+||..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 38 ~~v~~ll~~~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 114 (351)
T 3utm_A 38 EKLMALLTPLNV--NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHG 114 (351)
T ss_dssp HHHHHHCCTTTT--TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCC--CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCC
Confidence 456666654 44 6899999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccC
Q 038131 81 ASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCI 160 (654)
Q Consensus 81 ~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~ 160 (654)
++++ .+|..|.||||+|+..|+.+++++|++++++ ++..+..|.||+|+|+..+ ..+.++.......
T Consensus 115 ~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~~~l~~a~~~~-------~~~~~~~~~~~~~ 181 (351)
T 3utm_A 115 ACVN-----AMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPE-------LRERLTYEFKGHS 181 (351)
T ss_dssp CCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCSSHH-------HHHHHHHHHHHHH
T ss_pred CCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCcchHHHhhhh-------hHHHHHhhhcccH
Confidence 9998 8999999999999999999999999999998 9999999999999998766 5555555432110
Q ss_pred cccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcc
Q 038131 161 SVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEES 240 (654)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (654)
............+.. ++..+... ......
T Consensus 182 --------------------------~~~~~~~~~~~~~~~----~l~~~~~~-~~~~~~-------------------- 210 (351)
T 3utm_A 182 --------------------------LLQAAREADLAKVKK----TLALEIIN-FKQPQS-------------------- 210 (351)
T ss_dssp --------------------------HHHHHHTTCHHHHHH----HTTTCCTT-CCCTTT--------------------
T ss_pred --------------------------HHHHHHhccHHHHHH----HHHhhccc-ccCCCC--------------------
Confidence 011111111111111 11111100 000000
Q ss_pred cccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHcc-ccccccCCCCC
Q 038131 241 RHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRA-SLYEYDDDGGK 319 (654)
Q Consensus 241 ~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~-~~~~~d~~g~t 319 (654)
|.+.+.... ...+....++++.|++.+ ..+..|.+|+|
T Consensus 211 ---------------------------------------~~t~L~~A~--~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 249 (351)
T 3utm_A 211 ---------------------------------------HETALHCAV--ASLHPKRKQVAELLLRKGANVNEKNKDFMT 249 (351)
T ss_dssp ---------------------------------------CCCHHHHHH--HCCSTTHHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred ---------------------------------------CCCHHHHHH--HHhCccHHHHHHHHHHcCCCcCCcCCCCCC
Confidence 111221111 222223368999999998 67778999999
Q ss_pred CCCCCCCccccCCCCCCCccCCCCchhhhccccCCC--ccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCC
Q 038131 320 PLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGST--IPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKK 397 (654)
Q Consensus 320 pLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~ 397 (654)
|||+|+. .+..+.++.+++.+. +..|..|+||||+|+..|+.++|++|+++ +.+++.+|.+|+
T Consensus 250 ~L~~A~~--------------~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~~~~g~ 314 (351)
T 3utm_A 250 PLHVAAE--------------RAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY-GSDPSIISLQGF 314 (351)
T ss_dssp HHHHHHH--------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred HHHHHHH--------------cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCC
Confidence 9999987 667788888887765 44688999999999999999999999997 899999999999
Q ss_pred chhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCC
Q 038131 398 NIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 398 T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
||+|+| +.+++++|.+... ....++.++|..|++.|+
T Consensus 315 tal~~a----~~~~~~~l~~~~~-------~~~~~~~~~l~~A~~~gd 351 (351)
T 3utm_A 315 TAAQMG----NEAVQQILSESTP-------MRTSDVDYRLLEASKAGD 351 (351)
T ss_dssp CHHHHS----CHHHHHHHHHC---------------------------
T ss_pred Chhhhh----hHHHHHHHHhccc-------cccCcceeehhhhhccCC
Confidence 999998 6788999988875 356778999999999875
No 22
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=303.29 Aligned_cols=242 Identities=19% Similarity=0.142 Sum_probs=183.1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhC----------CccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCcc
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATAD----------PRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTY 89 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~----------~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~ 89 (654)
...|.|+||+||..|+.+.+..++..+ ...++.+|.+|+||||+||..|+.+++++|++.|++++
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~----- 86 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVN----- 86 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSC-----
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----
Confidence 357999999999999987777766543 22367789999999999999999999999999999998
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhh
Q 038131 90 SRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEET 169 (654)
Q Consensus 90 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 169 (654)
.+|.+|.||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+..| +.+++++|++.+++++.
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~----- 153 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSG-------SWDCVNLLLQHGASVQP----- 153 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHT-------CHHHHHHHHHTTCCSSC-----
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC-------HHHHHHHHHHCCCCCCC-----
Confidence 8999999999999999999999999999987 9999999999999999998 78888888776544321
Q ss_pred hhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCC
Q 038131 170 SYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGH 249 (654)
Q Consensus 170 ~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 249 (654)
T Consensus 154 -------------------------------------------------------------------------------- 153 (285)
T 3d9h_A 154 -------------------------------------------------------------------------------- 153 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccc
Q 038131 250 QFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAE 329 (654)
Q Consensus 250 ~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~ 329 (654)
T Consensus 154 -------------------------------------------------------------------------------- 153 (285)
T 3d9h_A 154 -------------------------------------------------------------------------------- 153 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCCh
Q 038131 330 EDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQP 409 (654)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~ 409 (654)
+..|.||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+.+|+.
T Consensus 154 -----------------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 154 -----------------------------ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQR 203 (285)
T ss_dssp -----------------------------SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred -----------------------------CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcH
Confidence 12478999999999999999999996 888999999999999999999999
Q ss_pred HHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCCcCCcchhhhhHHHHH-HhhcCCChhhhhhh
Q 038131 410 HVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKPWLTPGAALQMQWELR-WYEQDKSAEDLFTE 477 (654)
Q Consensus 410 ~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~~~~~~~~~~~~~~~~-~~~~g~t~~di~~~ 477 (654)
+++++|++.++ +++. |..|+||||+|++.|+.+++... ++...++. ..++|+||.+++..
T Consensus 204 ~~v~~Ll~~ga----~~~~-~~~g~t~L~~A~~~~~~~~v~~L---l~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 204 ACVKKLLESGA----DVNQ-GKGQDSPLHAVVRTASEELACLL---MDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp HHHHHHHHTTC----CTTC-CBTTBCHHHHHHHTTCHHHHHHH---HHTTCCTTCCCTTSCCGGGGSCT
T ss_pred HHHHHHHHCCC----CCCC-CCCCCCHHHHHHHcCCHHHHHHH---HHCCCCCCCcCCCCCCHHHHhcC
Confidence 99999999998 7774 99999999999999985543211 00000111 12389999999984
No 23
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.5e-36 Score=319.22 Aligned_cols=242 Identities=16% Similarity=0.108 Sum_probs=206.9
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhh--
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYL-- 79 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-- 79 (654)
++|++|+++|+ +++.+|..|+||||+||..|+.++|++|++.+++ + .+.+|.||||+|+..|+.+++++|+++
T Consensus 34 ~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 108 (364)
T 3ljn_A 34 DEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV-H--SLWHGQKPIHLAVMANKTDLVVALVEGAK 108 (364)
T ss_dssp HHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-C--CCBTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC--CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-c--cccCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 68999999987 7999999999999999999999999999999985 3 345899999999999999999999999
Q ss_pred --cCCCCC------------CCccccCCCCCcHHHHHHHcC--CHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCC
Q 038131 80 --CASVDD------------GYTYSRRNEGDTVLHCAISGD--YFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAF 143 (654)
Q Consensus 80 --g~~~~~------------~~~~~~~~~g~T~Lh~A~~~g--~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~ 143 (654)
|++++. ...+.+|..|.||||+|+..| +.+++++|++.+++ ++.+|..|.||||+|+..|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g--- 184 (364)
T 3ljn_A 109 ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFR--- 184 (364)
T ss_dssp HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTT---
T ss_pred ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcC---
Confidence 666540 011228889999999999999 99999999999987 9999999999999999999
Q ss_pred ccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 038131 144 RSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAED 223 (654)
Q Consensus 144 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~ 223 (654)
+.+++++|++.|++....+
T Consensus 185 ----~~~~v~~Ll~~g~~~~~~~--------------------------------------------------------- 203 (364)
T 3ljn_A 185 ----NREALDLMMDTVPSKSSLR--------------------------------------------------------- 203 (364)
T ss_dssp ----CHHHHHHHHHHCSCSSSCC---------------------------------------------------------
T ss_pred ----CHHHHHHHHhccccccccc---------------------------------------------------------
Confidence 8999999988776522111
Q ss_pred ccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHH
Q 038131 224 PERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDE 303 (654)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~ 303 (654)
T Consensus 204 -------------------------------------------------------------------------------- 203 (364)
T 3ljn_A 204 -------------------------------------------------------------------------------- 203 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHH
Q 038131 304 LLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILE 383 (654)
Q Consensus 304 Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~ 383 (654)
.+..|..|+||||+|+..|+.++|++||+
T Consensus 204 ---------------------------------------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 232 (364)
T 3ljn_A 204 ---------------------------------------------------LDYANKQGNSHLHWAILINWEDVAMRFVE 232 (364)
T ss_dssp ---------------------------------------------------TTCCCTTCCCTTHHHHTTTCHHHHHHHHT
T ss_pred ---------------------------------------------------ccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 01123578999999999999999999999
Q ss_pred HCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCccc--------ccccccccCCCCcHhHHHhhcCC
Q 038131 384 SFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMK--------DSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 384 ~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~--------~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
+ +.+++.+|.+|+||||+|+++|+.+++++|+++++.. .......+..|+|||+.|+..|+
T Consensus 233 ~-gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~ 301 (364)
T 3ljn_A 233 M-GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPS 301 (364)
T ss_dssp T-TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHH
T ss_pred c-CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccC
Confidence 6 8999999999999999999999999999999998611 01122367889999999998876
No 24
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=7.4e-36 Score=302.60 Aligned_cols=221 Identities=17% Similarity=0.125 Sum_probs=197.0
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
+++++|.+. +++.+|.+|+||||+||..|+.+++++|++.|++ ++.+| |+||||+||..|+.+++++|+++|+
T Consensus 14 ~v~~lL~~~----~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 14 QLKSFLSSK----DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLLE--NEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp HHHHHHHST----TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCCT--TCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred HHHHHHHhC----CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCC--CCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 566777654 4889999999999999999999999999999988 77774 9999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCC-CCHHHHHhcCCCCCccCCchHHHHHHhhccC
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQG-VSPLHLLATKPNAFRSGSHLGLCTGIIYHCI 160 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g-~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~ 160 (654)
+++ .+|..|.||||+|+..|+.+++++|++++++ ++.+|..| .||||+|+..| +.+++++|+++|.
T Consensus 87 ~~~-----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~-------~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 87 DDS-----QFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLN-------DVSIVSYFLSEIP 153 (285)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTT-------CHHHHHHHHTTSC
T ss_pred CCC-----CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcC-------CHHHHHHHHhCCC
Confidence 998 8999999999999999999999999999998 99999999 89999999999 8888888877653
Q ss_pred cccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcc
Q 038131 161 SVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEES 240 (654)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (654)
+...
T Consensus 154 ~~~~---------------------------------------------------------------------------- 157 (285)
T 3kea_A 154 STFD---------------------------------------------------------------------------- 157 (285)
T ss_dssp TTCC----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 2200
Q ss_pred cccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCC
Q 038131 241 RHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKP 320 (654)
Q Consensus 241 ~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tp 320 (654)
T Consensus 158 -------------------------------------------------------------------------------- 157 (285)
T 3kea_A 158 -------------------------------------------------------------------------------- 157 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCch-
Q 038131 321 LRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNI- 399 (654)
Q Consensus 321 Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~- 399 (654)
...|.||||+|+..|+.+++++|+++ +.+++.+|..|+||
T Consensus 158 --------------------------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~ 198 (285)
T 3kea_A 158 --------------------------------------LAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPD 198 (285)
T ss_dssp --------------------------------------CSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCTT
T ss_pred --------------------------------------ccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCChH
Confidence 02578999999999999999999998 89999999999998
Q ss_pred hHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCC
Q 038131 400 VLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 400 Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
||+|+.+|+.+++++|+++|+ +++.+| +.|+..|+.++
T Consensus 199 L~~A~~~~~~~~v~~Ll~~ga----d~~~~~-------~~a~~~~~~~i 236 (285)
T 3kea_A 199 IKLAIDNKDIEMLQALFKYDI----NIYSAN-------LENVLLDDAEI 236 (285)
T ss_dssp HHHHHHHTCHHHHHHHTTSCB----CSTTTT-------GGGGTTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCC----CCCCCC-------hhhhhcCCHHH
Confidence 999999999999999999998 888888 46677776443
No 25
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.4e-35 Score=288.99 Aligned_cols=209 Identities=21% Similarity=0.230 Sum_probs=192.0
Q ss_pred hhHHHHHhccccccccc-CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc
Q 038131 2 DLVGIIQEKQQLKVLKI-GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC 80 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~-~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 80 (654)
++++.|+++|. +++. .|.+|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++++
T Consensus 5 ~~i~~Ll~~g~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 5 AVISDFIYQGA--SLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp CCEETTEETTC--CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred HHHHHHHHcCC--CcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 67889999987 4555 589999999999999999999999999988 9999999999999999999999999999998
Q ss_pred C-CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhcc
Q 038131 81 A-SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 81 ~-~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
+ +++ .++..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.+++++|+++|
T Consensus 82 ~~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g 148 (223)
T 2f8y_A 82 ATDLD-----ARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVN-------NVDAAVVLLKNG 148 (223)
T ss_dssp TSCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTT-------CHHHHHHHHHTT
T ss_pred CCCcc-----cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-CcCcCCCCCcHHHHHHHcC-------CHHHHHHHHHcC
Confidence 7 666 8899999999999999999999999999987 9999999999999999999 889999888776
Q ss_pred CcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCc
Q 038131 160 ISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEE 239 (654)
Q Consensus 160 ~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (654)
++++..
T Consensus 149 ~~~~~~-------------------------------------------------------------------------- 154 (223)
T 2f8y_A 149 ANKDMQ-------------------------------------------------------------------------- 154 (223)
T ss_dssp CCTTCC--------------------------------------------------------------------------
T ss_pred CCCCCc--------------------------------------------------------------------------
Confidence 554322
Q ss_pred ccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCC
Q 038131 240 SRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGK 319 (654)
Q Consensus 240 ~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~t 319 (654)
T Consensus 155 -------------------------------------------------------------------------------- 154 (223)
T 2f8y_A 155 -------------------------------------------------------------------------------- 154 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCch
Q 038131 320 PLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNI 399 (654)
Q Consensus 320 pLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~ 399 (654)
|..|.||||+|+..|+.+++++|+++ +.+++.+|..|+||
T Consensus 155 ---------------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~ 194 (223)
T 2f8y_A 155 ---------------------------------------NNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLP 194 (223)
T ss_dssp ---------------------------------------CTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCH
T ss_pred ---------------------------------------CCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCH
Confidence 24688999999999999999999997 88999999999999
Q ss_pred hHHHHHcCChHHHHHHHhcCc
Q 038131 400 VLLAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 400 Lh~Av~~~~~~iv~~Ll~~~~ 420 (654)
||+|+++++.+++++|++.++
T Consensus 195 l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 195 RDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHhcchHHHHHHHHcCC
Confidence 999999999999999999997
No 26
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.5e-35 Score=293.39 Aligned_cols=210 Identities=20% Similarity=0.211 Sum_probs=179.2
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|.. ..+..|..|+||||+||..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++++
T Consensus 37 ~~v~~Ll~~g~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 37 AVISDFIYQGAS-LHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp ----------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred HHHHHHHHccCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 678999999872 2345689999999999999999999999999998 99999999999999999999999999999987
Q ss_pred -CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccC
Q 038131 82 -SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCI 160 (654)
Q Consensus 82 -~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~ 160 (654)
+++ .++..|.||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+..| +.+++++|+++|+
T Consensus 115 ~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~-------~~~~v~~Ll~~ga 181 (253)
T 1yyh_A 115 TDLD-----ARMHDGTTPLILAARLAVEGMLEDLINSHAD-VNAVDDLGKSALHWAAAVN-------NVDAAVVLLKNGA 181 (253)
T ss_dssp SCTT-----CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHT-------CHHHHHHHHHTTC
T ss_pred CCcc-----ccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcC-------CHHHHHHHHHcCC
Confidence 666 8999999999999999999999999999987 9999999999999999999 8899999988776
Q ss_pred cccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcc
Q 038131 161 SVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEES 240 (654)
Q Consensus 161 ~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (654)
+++..
T Consensus 182 ~~~~~--------------------------------------------------------------------------- 186 (253)
T 1yyh_A 182 NKDMQ--------------------------------------------------------------------------- 186 (253)
T ss_dssp CTTCC---------------------------------------------------------------------------
T ss_pred CCCCc---------------------------------------------------------------------------
Confidence 55422
Q ss_pred cccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCC
Q 038131 241 RHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKP 320 (654)
Q Consensus 241 ~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tp 320 (654)
T Consensus 187 -------------------------------------------------------------------------------- 186 (253)
T 1yyh_A 187 -------------------------------------------------------------------------------- 186 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchh
Q 038131 321 LRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIV 400 (654)
Q Consensus 321 Lh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~L 400 (654)
|..|.||||+|+..|+.+++++|+++ +.+++.+|..|+|||
T Consensus 187 --------------------------------------~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl 227 (253)
T 1yyh_A 187 --------------------------------------NNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLPR 227 (253)
T ss_dssp --------------------------------------CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred --------------------------------------CCCCCCHHHHHHHCCCHHHHHHHHHc-CCCccccccCCCCHH
Confidence 24689999999999999999999997 889999999999999
Q ss_pred HHHHHcCChHHHHHHHhcCc
Q 038131 401 LLAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 401 h~Av~~~~~~iv~~Ll~~~~ 420 (654)
|+|+++|+.+++++|.+...
T Consensus 228 ~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 228 DIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp HHHHHTTCHHHHHHHHC---
T ss_pred HHHHHcCCHHHHHHHHHHhh
Confidence 99999999999999998764
No 27
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=288.11 Aligned_cols=135 Identities=21% Similarity=0.211 Sum_probs=123.6
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCC
Q 038131 16 LKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEG 95 (654)
Q Consensus 16 l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g 95 (654)
++..|+.|.||||.|+..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++|++++. ..+..|
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~----~~~~~~ 76 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ----LGGDLN 76 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----CBTTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh----hcCCcC
Confidence 566789999999999999999999999999988 999999999999999999999999999999998861 345569
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 96 DTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 96 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.++++.|++++++++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~-------~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFG-------HTSIVAYLIAKGQDVD 136 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcC-------HHHHHHHHHhcCCCcc
Confidence 9999999999999999999999987 9999999999999999999 8899999988776554
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.7e-35 Score=285.90 Aligned_cols=210 Identities=17% Similarity=0.188 Sum_probs=192.8
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|++.+.. .++.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 20 ~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 97 (231)
T 3aji_A 20 DELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGA 97 (231)
T ss_dssp HHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCC
Confidence 567888877653 5888999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..| +.+++++|++.|++
T Consensus 98 ~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~ 164 (231)
T 3aji_A 98 HVN-----AVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-PDAKDHYDATAMHRAAAKG-------NLKMVHILLFYKAS 164 (231)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT-------CHHHHHHHHHTTCC
T ss_pred CCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcC-------CHHHHHHHHhcCCC
Confidence 998 8999999999999999999999999999987 9999999999999999998 88888888876655
Q ss_pred ccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCccc
Q 038131 162 VDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESR 241 (654)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (654)
++..
T Consensus 165 ~~~~---------------------------------------------------------------------------- 168 (231)
T 3aji_A 165 TNIQ---------------------------------------------------------------------------- 168 (231)
T ss_dssp SCCC----------------------------------------------------------------------------
T ss_pred cccc----------------------------------------------------------------------------
Confidence 4321
Q ss_pred ccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCC
Q 038131 242 HNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPL 321 (654)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpL 321 (654)
T Consensus 169 -------------------------------------------------------------------------------- 168 (231)
T 3aji_A 169 -------------------------------------------------------------------------------- 168 (231)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhH
Q 038131 322 RRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVL 401 (654)
Q Consensus 322 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh 401 (654)
|..|+||||+|+..|+.+++++|+++ +.+++.+|.+|+||||
T Consensus 169 -------------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~ 210 (231)
T 3aji_A 169 -------------------------------------DTEGNTPLHLACDEERVEEAKFLVTQ-GASIYIENKEEKTPLQ 210 (231)
T ss_dssp -------------------------------------CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHH
T ss_pred -------------------------------------CCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHH
Confidence 24689999999999999999999997 8999999999999999
Q ss_pred HHHHcCChHHHHHHHhcCc
Q 038131 402 LAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 402 ~Av~~~~~~iv~~Ll~~~~ 420 (654)
+|++.++.+++++|.+.++
T Consensus 211 ~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 211 VAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp HSCHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHccccc
Confidence 9999999999999999876
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-34 Score=292.80 Aligned_cols=269 Identities=17% Similarity=0.054 Sum_probs=181.0
Q ss_pred ccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCC
Q 038131 50 IGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQG 129 (654)
Q Consensus 50 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g 129 (654)
++.+|.+|+||||+||..|+.++|++|++.|++.+ .++.+|..|.||||+|+..|+.+++++|++++++ ++.+|..|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g 78 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHE--YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGG 78 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSG--GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTS
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc--cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCC
Confidence 67899999999999999999999999999999832 2338899999999999999999999999999998 99999999
Q ss_pred CCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcC
Q 038131 130 VSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNR 209 (654)
Q Consensus 130 ~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~ 209 (654)
.||||+|+..+ +.+++++|++.+.+.......... ..
T Consensus 79 ~tpL~~A~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~-------------------~~----------------- 115 (282)
T 1oy3_D 79 HTALHLACRVR-------AHTCACVLLQPRPSHPRDASDTYL-------------------TQ----------------- 115 (282)
T ss_dssp CCHHHHHTTTT-------CHHHHHHHSSSCCSSCCCC-------------------------------------------
T ss_pred CCHHHHHHHcC-------CcchhHhhhccCCCCchhhHHHHh-------------------hc-----------------
Confidence 99999999999 999999999988765433211000 00
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHH
Q 038131 210 GNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIRE 289 (654)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~ 289 (654)
+.
T Consensus 116 ~~------------------------------------------------------------------------------ 117 (282)
T 1oy3_D 116 SQ------------------------------------------------------------------------------ 117 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred HhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHH
Q 038131 290 KKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIA 369 (654)
Q Consensus 290 ~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~A 369 (654)
......+.+|++.+...... ..............+..|..|.||||+|
T Consensus 118 ---------------------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 118 ---------------------DCTPDTSHAPAAVDSQPNPE-----------NEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp ----------------------------------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred ---------------------ccCcchhcchhhhccccccc-----------hhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 00000111122211111000 0000000011112344567899999999
Q ss_pred HHcChHHHHHHHHHHCCCccccccCC-CCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCC
Q 038131 370 AKNGITEIVEKILESFPVAIHDINSE-KKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 370 a~~G~~eiv~~LL~~~~~~~~~~d~~-G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
+..|+.+++++|++. +.+++..+.. |+||||+|+++|+.+++++|+++++ +++.+|..|+||||+|++.|+.++
T Consensus 166 ~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----d~~~~d~~g~tpL~~A~~~~~~~~ 240 (282)
T 1oy3_D 166 VIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA----DPTARMYGGRTPLGSALLRPNPIL 240 (282)
T ss_dssp HHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHTSSCHHH
T ss_pred HHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCC----CCcccccCCCCHHHHHHHcCCcHH
Confidence 999999999999997 7888888865 9999999999999999999999998 999999999999999999998544
Q ss_pred cCCcchhhhhHHHHH-HhhcCCChhhhhhhhhhhH
Q 038131 449 WLTPGAALQMQWELR-WYEQDKSAEDLFTETHISL 482 (654)
Q Consensus 449 ~~~~~~~~~~~~~~~-~~~~g~t~~di~~~~~~~~ 482 (654)
+... ++...++. ..++|.||.+.+.......
T Consensus 241 v~~L---l~~ga~~~~~~~~g~tpl~~a~~~~~~~ 272 (282)
T 1oy3_D 241 ARLL---RAHGAPEPEDGGDKLSPCSSSGSDSDSD 272 (282)
T ss_dssp HHHH---HHTTCCCCCCC-----------------
T ss_pred HHHH---HHcCCCcCcCCCcccccccccCCccccc
Confidence 3211 00000010 1228999999987765443
No 30
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.9e-36 Score=295.88 Aligned_cols=222 Identities=15% Similarity=0.188 Sum_probs=189.1
Q ss_pred ccCCCCCChHHHHHHhcCCHHHHHHHHhhCCc---cccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCC
Q 038131 17 KIGDERGSTPLHIAAGLGNVSMCKCIATADPR---LIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRN 93 (654)
Q Consensus 17 ~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~---~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 93 (654)
+.+|.+|+||||+|+..|+.+++++|++.+.. .++.+|..|+||||+|+..|+.+++++|+++|++++ .+|.
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~ 76 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPE-----LRDF 76 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSC-----CCCT
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCC
Confidence 35789999999999999999999999988763 489999999999999999999999999999999998 8999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhccc-----cccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchh
Q 038131 94 EGDTVLHCAISGDYFDLAFQIIHRCEK-----LVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEE 168 (654)
Q Consensus 94 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~-----~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 168 (654)
.|.||||+|+..|+.+++++|++.+++ .++..|..|.||||+|+..| +.+++++|+++|++++..+.
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~~~- 148 (236)
T 1ikn_D 77 RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG-------YLGIVELLVSLGADVNAQEP- 148 (236)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTT-------CHHHHHHHHHHTCCTTCCCT-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCC-
Confidence 999999999999999999999998853 36788999999999999999 89999999887766543220
Q ss_pred hhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCC
Q 038131 169 TSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQG 248 (654)
Q Consensus 169 ~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 248 (654)
T Consensus 149 -------------------------------------------------------------------------------- 148 (236)
T 1ikn_D 149 -------------------------------------------------------------------------------- 148 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCcc
Q 038131 249 HQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQA 328 (654)
Q Consensus 249 ~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~ 328 (654)
T Consensus 149 -------------------------------------------------------------------------------- 148 (236)
T 1ikn_D 149 -------------------------------------------------------------------------------- 148 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCC
Q 038131 329 EEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQ 408 (654)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~ 408 (654)
..|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+.+|+
T Consensus 149 -------------------------------~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 149 -------------------------------CNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp -------------------------------TTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTTSSC
T ss_pred -------------------------------CCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHHHHccCc
Confidence 2589999999999999999999997 89999999999999999999999
Q ss_pred hHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCC
Q 038131 409 PHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGD 445 (654)
Q Consensus 409 ~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~ 445 (654)
.+++++|+++++ +......+.+|.||.+.+.....
T Consensus 197 ~~~~~~Ll~~ga--~~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 197 TRIQQQLGQLTL--ENLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp HHHHHHHHTTSC--GGGSSCCCCCTTTCCCCC-----
T ss_pred hHHHHHHHHcch--hhhhcCCccchHHHHhhhccccc
Confidence 999999999998 12334889999999998876554
No 31
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=294.86 Aligned_cols=148 Identities=19% Similarity=0.243 Sum_probs=109.2
Q ss_pred hhHHHHHhccccc------ccccCCCCCChHHHHHHhcCCHH-HHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHH
Q 038131 2 DLVGIIQEKQQLK------VLKIGDERGSTPLHIAAGLGNVS-MCKCIATADPRLIGERNHENETPFFLAALHGHKDAFL 74 (654)
Q Consensus 2 ~iv~~Ll~~~~~~------~l~~~d~~g~T~Lh~Aa~~G~~~-~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~ 74 (654)
++|++|++.++.. .++..|..|.||||.|+..++.+ +++.|++.|++ +|.+|.+|+||||+||..|+.++|+
T Consensus 25 ~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~ 103 (269)
T 4b93_B 25 EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQDGSSPLHVAALHGRADLIP 103 (269)
T ss_dssp HHHHHHHTCC----------------------------------------CCCC-TTCCCTTSCCHHHHHHHTTCTTHHH
T ss_pred HHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 6899999887632 36778889999999999988764 88999999998 9999999999999999999999999
Q ss_pred HHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHH
Q 038131 75 CLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTG 154 (654)
Q Consensus 75 ~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~ 154 (654)
+|++.|++++ .++.+|.||||+|+..++.+++++|++.+++ ++.+|..|.||||+|+..| +.+++++
T Consensus 104 ~Ll~~~a~~~-----~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~TpL~~A~~~g-------~~~~v~~ 170 (269)
T 4b93_B 104 LLLKHGANAG-----ARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNTPLIYACSGG-------HHELVAL 170 (269)
T ss_dssp HHHHTTCCTT-----CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTT-------CGGGHHH
T ss_pred HHHhcCCCcC-----ccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCC-------CHHHHHH
Confidence 9999999998 8999999999999999999999999999998 9999999999999999999 8999999
Q ss_pred HhhccCccc
Q 038131 155 IIYHCISVD 163 (654)
Q Consensus 155 Ll~~~~~~~ 163 (654)
|+++|++++
T Consensus 171 Ll~~gadvn 179 (269)
T 4b93_B 171 LLQHGASIN 179 (269)
T ss_dssp HHHTTCCTT
T ss_pred HHHCCCCCC
Confidence 998887664
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.6e-34 Score=285.01 Aligned_cols=213 Identities=19% Similarity=0.190 Sum_probs=186.0
Q ss_pred hhHHHHHh----cccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHH
Q 038131 2 DLVGIIQE----KQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLH 77 (654)
Q Consensus 2 ~iv~~Ll~----~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll 77 (654)
++|+.|++ .+. +++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+
T Consensus 23 ~~v~~Ll~~~~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 99 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGR--ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAHLACEHRSPTCLRALL 99 (241)
T ss_dssp HHHHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC--CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 46777776 555 7999999999999999999999999999999988 8999999999999999999999999999
Q ss_pred hhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccc-cCCCCHHHHHhcCCCCCccCCchHHHHHHh
Q 038131 78 YLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVN-EQGVSPLHLLATKPNAFRSGSHLGLCTGII 156 (654)
Q Consensus 78 ~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll 156 (654)
+.++... .+++.+|..|.||||+|+..|+.+++++|++.+++ ++..+ ..|.||||+|+..+ +.+++++|+
T Consensus 100 ~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll 170 (241)
T 1k1a_A 100 DSAAPGT-LDLEARNYDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVENN-------SLSMVQLLL 170 (241)
T ss_dssp HHSCTTS-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTT-------CHHHHHHHH
T ss_pred HcCCCcc-ccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHHcC-------CHHHHHHHH
Confidence 9998322 22338899999999999999999999999999988 88888 88999999999999 889999998
Q ss_pred hccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 038131 157 YHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQ 236 (654)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (654)
++|++++..
T Consensus 171 ~~g~~~~~~----------------------------------------------------------------------- 179 (241)
T 1k1a_A 171 QHGANVNAQ----------------------------------------------------------------------- 179 (241)
T ss_dssp HTTCCTTCB-----------------------------------------------------------------------
T ss_pred HcCCCCCCc-----------------------------------------------------------------------
Confidence 877655422
Q ss_pred CCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCC
Q 038131 237 GEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDD 316 (654)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~ 316 (654)
T Consensus 180 -------------------------------------------------------------------------------- 179 (241)
T 1k1a_A 180 -------------------------------------------------------------------------------- 179 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCC
Q 038131 317 GGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEK 396 (654)
Q Consensus 317 g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G 396 (654)
|..|+||||+|+..|+.+++++|+++ +.+++.+|..|
T Consensus 180 ------------------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g 216 (241)
T 1k1a_A 180 ------------------------------------------MYSGSSALHSASGRGLLPLVRTLVRS-GADSSLKNCHN 216 (241)
T ss_dssp ------------------------------------------CTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTS
T ss_pred ------------------------------------------CCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCcCCCC
Confidence 24689999999999999999999996 89999999999
Q ss_pred CchhHHHHHcCChHHHHHHHhcCc
Q 038131 397 KNIVLLAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 397 ~T~Lh~Av~~~~~~iv~~Ll~~~~ 420 (654)
+||||+|+..|+.++++.|.+.++
T Consensus 217 ~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 217 DTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp CCTTTTCSSHHHHHHHTC------
T ss_pred CCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999999999999999988764
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.3e-34 Score=282.25 Aligned_cols=206 Identities=18% Similarity=0.141 Sum_probs=185.5
Q ss_pred cCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 038131 33 LGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAF 112 (654)
Q Consensus 33 ~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~ 112 (654)
.|+.+++++|++.+++..+..|.+|+||||+||..|+.+++++|+++|++++ .+|..|.||||+|+..|+.++++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~~~v~ 75 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN-----IQDNMGRTPLHAAVSADAQGVFQ 75 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCHHHHH
Confidence 3788999999999999555669999999999999999999999999999998 89999999999999999999999
Q ss_pred HHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHH
Q 038131 113 QIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETC 192 (654)
Q Consensus 113 ~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 192 (654)
+|++.++.+++.++..|.||||+|+..+ +.++++.|++.+++++..
T Consensus 76 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~~~~~~--------------------------- 121 (223)
T 2f8y_A 76 ILIRNRATDLDARMHDGTTPLILAARLA-------VEGMLEDLINSHADVNAV--------------------------- 121 (223)
T ss_dssp HHHHBTTSCTTCCCTTCCCHHHHHHHHT-------CHHHHHHHHHTTCCTTCB---------------------------
T ss_pred HHHHcCCCCcccCCCCCCcHHHHHHHhC-------cHHHHHHHHHcCCCCcCc---------------------------
Confidence 9999998669999999999999999998 888888888766554321
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhH
Q 038131 193 LNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKA 272 (654)
Q Consensus 193 ~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~ 272 (654)
T Consensus 122 -------------------------------------------------------------------------------- 121 (223)
T 2f8y_A 122 -------------------------------------------------------------------------------- 121 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhcccc
Q 038131 273 MLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKT 352 (654)
Q Consensus 273 ~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (654)
T Consensus 122 -------------------------------------------------------------------------------- 121 (223)
T 2f8y_A 122 -------------------------------------------------------------------------------- 121 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCC
Q 038131 353 GSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQ 432 (654)
Q Consensus 353 ~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~ 432 (654)
|..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+++|+.+++++|+++++ +++.+|..
T Consensus 122 ------~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~ 190 (223)
T 2f8y_A 122 ------DDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFA----NRDITDHM 190 (223)
T ss_dssp ------CTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC----CTTCCCTT
T ss_pred ------CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC----CCcccccc
Confidence 24588999999999999999999997 89999999999999999999999999999999998 89999999
Q ss_pred CCcHhHHHhhcCCCCC
Q 038131 433 GNSALHLAATLGDHKP 448 (654)
Q Consensus 433 G~TpLh~Aa~~g~~~~ 448 (654)
|+||||+|++.|+.++
T Consensus 191 g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 191 DRLPRDIAQERMHHDI 206 (223)
T ss_dssp CCCHHHHHHHTTCHHH
T ss_pred CCCHHHHHHHhcchHH
Confidence 9999999999998443
No 34
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-35 Score=303.02 Aligned_cols=242 Identities=10% Similarity=0.022 Sum_probs=183.1
Q ss_pred hhHHHHHhccccccccc-----------------CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccC-CCCCCChHHHH
Q 038131 2 DLVGIIQEKQQLKVLKI-----------------GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGE-RNHENETPFFL 63 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~-----------------~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~-~d~~G~TpLh~ 63 (654)
++|+.|+++|.. .+. +.....+.+|+|+..+..+++++|++.+.+ ++. +|.+|+||||+
T Consensus 61 ~~v~~Ll~~g~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~d-vn~~~d~~g~TpLh~ 137 (327)
T 1sw6_A 61 MKLEAFLQRLLF--PEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN-LNIPVDEHGNTPLHW 137 (327)
T ss_dssp HHHHHHHHHHHC---------------------------------CHHHHHHHHHHHCTTSCCC-SCSCCSTTCCCHHHH
T ss_pred HHHHHHHHhccC--CccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCC-cccccCCCCCcHHHH
Confidence 689999999863 222 111223346888888999999999999998 999 89999999999
Q ss_pred HHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCC---HHHHHHHHHhccccccccccCCCCHHHHHhc--
Q 038131 64 AALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDY---FDLAFQIIHRCEKLVNSVNEQGVSPLHLLAT-- 138 (654)
Q Consensus 64 Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~-- 138 (654)
||..|+.++|++|+++|++++ .+|..|.||||+|+..|+ .++++.|++.+..+++.+|..|.||||+|+.
T Consensus 138 Aa~~g~~~~v~~Ll~~Gad~n-----~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~ 212 (327)
T 1sw6_A 138 LTSIANLELVKHLVKHGSNRL-----YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITS 212 (327)
T ss_dssp HHHTTCHHHHHHHHHTTCCTT-----BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHc
Confidence 999999999999999999998 899999999999999998 7889999998855699999999999999998
Q ss_pred --CCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCC
Q 038131 139 --KPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQ 216 (654)
Q Consensus 139 --~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~ 216 (654)
.| +.++++.|++.+.........
T Consensus 213 ~~~g-------~~~~v~~Ll~~~~~~~~~~~~------------------------------------------------ 237 (327)
T 1sw6_A 213 GMTG-------CSAAAKYYLDILMGWIVKKQN------------------------------------------------ 237 (327)
T ss_dssp TSTT-------CHHHHHHHHHHHHHHHHHGGG------------------------------------------------
T ss_pred cccc-------cHHHHHHHHHHHHHHHhcccc------------------------------------------------
Confidence 77 889999997654322110000
Q ss_pred CCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhh
Q 038131 217 TPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTW 296 (654)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 296 (654)
T Consensus 238 -------------------------------------------------------------------------------- 237 (327)
T 1sw6_A 238 -------------------------------------------------------------------------------- 237 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHH
Q 038131 297 SVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITE 376 (654)
Q Consensus 297 ~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~e 376 (654)
....+.+ .......+..+..|+||||.|+.
T Consensus 238 ---------------------~~i~~~~------------------------~~~g~~~~~~~~~g~t~L~~a~~----- 267 (327)
T 1sw6_A 238 ---------------------RPIQSGT------------------------NEKESKPNDKNGERKDSILENLD----- 267 (327)
T ss_dssp ---------------------CCEEEC----------------------------------------CHHHHHCS-----
T ss_pred ---------------------hHHHhhh------------------------hcccCCcccccccCCChhHHHHH-----
Confidence 0000000 00001112345679999999986
Q ss_pred HHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcC
Q 038131 377 IVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLG 444 (654)
Q Consensus 377 iv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g 444 (654)
+++|++. +++.+|.+|+||||+|+++|+.++|++|+++++ +++.+|.+|+||||+|++.|
T Consensus 268 -~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga----d~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 -LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGA----DPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC----CTTCCCTTSCCGGGGTCC--
T ss_pred -HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCCCHHHHHHhcC
Confidence 8999997 488999999999999999999999999999998 99999999999999999865
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.2e-34 Score=279.68 Aligned_cols=146 Identities=18% Similarity=0.187 Sum_probs=136.7
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc-
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC- 80 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g- 80 (654)
++|++|+++|. +++.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 25 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 25 DICHMLVQAGA--NIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCC--CcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 68999999988 7999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccC
Q 038131 81 ASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCI 160 (654)
Q Consensus 81 ~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~ 160 (654)
.+++ ..+..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..| +.+++++|++.|+
T Consensus 102 ~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~~~~Ll~~g~ 168 (237)
T 3b7b_A 102 MDVN-----CQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-INIRDNEENICLHWAAFSG-------CVDIAEILLAAKC 168 (237)
T ss_dssp CCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHC-------CHHHHHHHHTTTC
T ss_pred CCcc-----cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCCHHHHHHHCC-------CHHHHHHHHHcCC
Confidence 6776 8999999999999999999999999999997 9999999999999999998 8889988887765
Q ss_pred ccc
Q 038131 161 SVD 163 (654)
Q Consensus 161 ~~~ 163 (654)
+++
T Consensus 169 ~~~ 171 (237)
T 3b7b_A 169 DLH 171 (237)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 36
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1e-33 Score=277.77 Aligned_cols=133 Identities=22% Similarity=0.204 Sum_probs=118.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhh-CCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATA-DPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLH 100 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh 100 (654)
.|+||||+||..|+.++++.|++. +.+ ++.+|.+|+||||+||..|+.+++++|+++|+++.....+.+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 589999999999999999999998 666 999999999999999999999999999999998632223378889999999
Q ss_pred HHHHcCCHHHHHHHHHhcccccccccc-------------CCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 101 CAISGDYFDLAFQIIHRCEKLVNSVNE-------------QGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~-------------~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
+|+..|+.+++++|++++++ ++.++. .|.||||+|+..| +.+++++|+++|++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVG-------SEEIVRLLIEHGADIR 148 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcC-------CHHHHHHHHHCCCCCC
Confidence 99999999999999999987 777765 7999999999999 8899999988776654
No 37
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-33 Score=296.56 Aligned_cols=206 Identities=16% Similarity=0.180 Sum_probs=186.5
Q ss_pred HHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc---C
Q 038131 5 GIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC---A 81 (654)
Q Consensus 5 ~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g---~ 81 (654)
+.|++.|+ ++|.+|.+|+||||+||..|+.++|++|++.|++ ++.+|..|.||||+|+..|+.+++++|++++ +
T Consensus 150 ~~ll~~ga--~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 150 KECIAAGA--DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp HHHHHTCC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred HHHHhcCC--CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 44557887 7999999999999999999999999999999998 9999999999999999999999999999998 7
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcC---CHHHHHHHHHhccccccc--------cccCCCCHHHHHhcCCCCCccCCchH
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGD---YFDLAFQIIHRCEKLVNS--------VNEQGVSPLHLLATKPNAFRSGSHLG 150 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g---~~~~v~~Ll~~~~~~~~~--------~d~~g~TpLh~A~~~~~~~~~~~~~~ 150 (654)
+++ ..|..|.||||+|+..+ +.+++++|++.+++ ++. +|..|.||||+|+..| +.+
T Consensus 227 ~~~-----~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g-------~~~ 293 (373)
T 2fo1_E 227 DIE-----ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVS-------NMP 293 (373)
T ss_dssp TTS-----CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSC-------CHH
T ss_pred Chh-----hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhC-------CHH
Confidence 777 89999999999999998 89999999999987 665 6779999999999999 888
Q ss_pred HHHHHhhcc-CcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCC
Q 038131 151 LCTGIIYHC-ISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKG 229 (654)
Q Consensus 151 ~v~~Ll~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~ 229 (654)
++++|++.+ ++++.
T Consensus 294 ~v~~Ll~~~~~~~n~----------------------------------------------------------------- 308 (373)
T 2fo1_E 294 IVKYLVGEKGSNKDK----------------------------------------------------------------- 308 (373)
T ss_dssp HHHHHHHHSCCCTTC-----------------------------------------------------------------
T ss_pred HHHHHHHhcCCCccC-----------------------------------------------------------------
Confidence 888887654 33321
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccc
Q 038131 230 IDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRAS 309 (654)
Q Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~ 309 (654)
T Consensus 309 -------------------------------------------------------------------------------- 308 (373)
T 2fo1_E 309 -------------------------------------------------------------------------------- 308 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCcc
Q 038131 310 LYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAI 389 (654)
Q Consensus 310 ~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~ 389 (654)
.|..|+||||+|+..|+.++|++|+++ +.++
T Consensus 309 ------------------------------------------------~d~~g~TpL~~A~~~g~~~iv~~Ll~~-gad~ 339 (373)
T 2fo1_E 309 ------------------------------------------------QDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASV 339 (373)
T ss_dssp ------------------------------------------------CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCS
T ss_pred ------------------------------------------------cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCc
Confidence 235689999999999999999999996 8999
Q ss_pred ccccCCCCchhHHHHHcCChHHHHHHHhcCc
Q 038131 390 HDINSEKKNIVLLAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 390 ~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~ 420 (654)
+.+|.+|+||||+|+.+|+.+++++|+++++
T Consensus 340 ~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 340 EAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp SCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 9999999999999999999999999999986
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.9e-33 Score=274.43 Aligned_cols=212 Identities=18% Similarity=0.183 Sum_probs=190.0
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|++.|. +++.+|..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|+..|+.+++++|+++|+
T Consensus 23 ~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~ 100 (240)
T 3eu9_A 23 ERCRELVEAGY--DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGA 100 (240)
T ss_dssp HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC--CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCC
Confidence 68999999987 7999999999999999999999999999999998555666679999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .++..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+. ..++++.|++.+++
T Consensus 101 ~~~-----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~g~t~l~~a~~~~~------~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 101 DPS-----LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-VDMMDQNGMTPLMWAAYRTH------SVDPTRLLLTFNVS 168 (240)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHCC------SSTTHHHHHHTTCC
T ss_pred CCc-----ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC-ccccCCCCCcHHHHHHHhCC------hHHHHHHHHhcCCC
Confidence 998 8999999999999999999999999999987 99999999999999997662 36677777666554
Q ss_pred ccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCccc
Q 038131 162 VDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESR 241 (654)
Q Consensus 162 ~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (654)
++..+
T Consensus 169 ~~~~~--------------------------------------------------------------------------- 173 (240)
T 3eu9_A 169 VNLGD--------------------------------------------------------------------------- 173 (240)
T ss_dssp TTCCC---------------------------------------------------------------------------
T ss_pred cchhh---------------------------------------------------------------------------
Confidence 43211
Q ss_pred ccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCC
Q 038131 242 HNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPL 321 (654)
Q Consensus 242 ~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpL 321 (654)
T Consensus 174 -------------------------------------------------------------------------------- 173 (240)
T 3eu9_A 174 -------------------------------------------------------------------------------- 173 (240)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhH
Q 038131 322 RRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVL 401 (654)
Q Consensus 322 h~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh 401 (654)
+..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||
T Consensus 174 -------------------------------------~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~ 215 (240)
T 3eu9_A 174 -------------------------------------KYHKNTALHWAVLAGNTTVISLLLEA-GANVDAQNIKGESALD 215 (240)
T ss_dssp -------------------------------------TTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCBCTTSCBHHH
T ss_pred -------------------------------------ccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 02588999999999999999999998 8999999999999999
Q ss_pred HHHHcCChHHHHHHHhcCc
Q 038131 402 LAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 402 ~Av~~~~~~iv~~Ll~~~~ 420 (654)
+|+++|+.+++++|++.++
T Consensus 216 ~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 216 LAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp HHHHTTCHHHHHHHHHHC-
T ss_pred HHHHcCcHHHHHHHHHhhh
Confidence 9999999999999999986
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=4.8e-33 Score=266.41 Aligned_cols=128 Identities=16% Similarity=0.096 Sum_probs=119.4
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
+..+.||||.||..|+.+.++.|++.++..++.+|.+|+||||+|+..|+.+++++|+++|++++ .+|..|.|||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~l 76 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN-----LQNSISDSPY 76 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCCCCHH
Confidence 35689999999999999999999999985599999999999999999999999999999999998 8999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhcc
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
|+|+..|+.+++++|++.++.+++.+|..|.||||+|+..+ +.+++++|++.+
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g 129 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKG-------HIDNVKLLLEDG 129 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTT-------CHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcC-------CHHHHHHHHHcC
Confidence 99999999999999997777669999999999999999999 888888887765
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.9e-33 Score=273.53 Aligned_cols=143 Identities=20% Similarity=0.229 Sum_probs=130.4
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhC--CccccC-CCCCCChHHHHHHHcCCHHHHHHHHh
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATAD--PRLIGE-RNHENETPFFLAALHGHKDAFLCLHY 78 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~--~~~~~~-~d~~G~TpLh~Aa~~g~~~iv~~Ll~ 78 (654)
++|+.|++.+.. ..+.+|..|+||||+|+..|+.+++++|++.+ .+ ++. +|..|+||||+|+..|+.+++++|++
T Consensus 16 ~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 93 (228)
T 2dzn_A 16 FKVQELLHSKPS-LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-LDDYPDDSGWTPFHIACSVGNLEVVKSLYD 93 (228)
T ss_dssp HHHHHHHHHCGG-GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC-GGGCCCTTSCCHHHHHHHHCCHHHHHHHHS
T ss_pred HHHHHHHhcCcc-ccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-ccccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 678999998863 45669999999999999999999999999999 55 444 88999999999999999999999999
Q ss_pred hc--CCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHh
Q 038131 79 LC--ASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGII 156 (654)
Q Consensus 79 ~g--~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll 156 (654)
+| ++++ .++..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..| +.+++++|+
T Consensus 94 ~g~~~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll 160 (228)
T 2dzn_A 94 RPLKPDLN-----KITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLHRAASVG-------SLKLIELLC 160 (228)
T ss_dssp SSSCCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTT-------CHHHHHHHH
T ss_pred CCCCcccc-----cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHHHHHHcC-------CHHHHHHHH
Confidence 99 6666 8899999999999999999999999999987 9999999999999999999 888888888
Q ss_pred hcc
Q 038131 157 YHC 159 (654)
Q Consensus 157 ~~~ 159 (654)
+.|
T Consensus 161 ~~g 163 (228)
T 2dzn_A 161 GLG 163 (228)
T ss_dssp TTT
T ss_pred hcC
Confidence 765
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.1e-33 Score=281.61 Aligned_cols=218 Identities=17% Similarity=0.144 Sum_probs=171.0
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhh----CCcccc----CCCCCCChHHHHHHHc---CCHHHHHHHHhhcCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATA----DPRLIG----ERNHENETPFFLAALH---GHKDAFLCLHYLCASV 83 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~----~~~~~~----~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~ 83 (654)
..+..|..|+||||+||..|+.++|+.|++. +.+ ++ .+|..|+||||+||.. |+.++|++|+++|++.
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~ 83 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKR-LTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKT 83 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCC-TTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccc-cCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccc
Confidence 4567899999999999999999999988874 444 33 4688999999999987 9999999999999864
Q ss_pred CC------CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcccccccccc--------------CCCCHHHHHhcCCCCC
Q 038131 84 DD------GYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNE--------------QGVSPLHLLATKPNAF 143 (654)
Q Consensus 84 ~~------~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~--------------~g~TpLh~A~~~~~~~ 143 (654)
+. .....+|..|.||||+|+..|+.+++++|++++++ ++.++. .|.||||+|+..|
T Consensus 84 ~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g--- 159 (273)
T 2pnn_A 84 DSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTN--- 159 (273)
T ss_dssp TCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT---
T ss_pred cchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcC---
Confidence 31 11223677999999999999999999999999987 888887 7999999999999
Q ss_pred ccCCchHHHHHHhh---ccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 038131 144 RSGSHLGLCTGIIY---HCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKEQTPTD 220 (654)
Q Consensus 144 ~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 220 (654)
+.+++++|++ .|++++..
T Consensus 160 ----~~~~v~~Ll~~~~~gad~~~~------------------------------------------------------- 180 (273)
T 2pnn_A 160 ----QLAIVKFLLQNSWQPADISAR------------------------------------------------------- 180 (273)
T ss_dssp ----CHHHHHHHHHCSSCCCCTTCC-------------------------------------------------------
T ss_pred ----CHHHHHHHHhcccCCCCceee-------------------------------------------------------
Confidence 8999999988 66554422
Q ss_pred CCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhhhHHHH
Q 038131 221 AEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHTWSVQI 300 (654)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i 300 (654)
T Consensus 181 -------------------------------------------------------------------------------- 180 (273)
T 2pnn_A 181 -------------------------------------------------------------------------------- 180 (273)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcCh------
Q 038131 301 LDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGI------ 374 (654)
Q Consensus 301 l~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~------ 374 (654)
|..|+||||+|+..|+
T Consensus 181 ----------------------------------------------------------d~~g~tpLh~A~~~~~~~~~~~ 202 (273)
T 2pnn_A 181 ----------------------------------------------------------DSVGNTVLHALVEVADNTVDNT 202 (273)
T ss_dssp ----------------------------------------------------------CTTSCCHHHHHHHHCCSCHHHH
T ss_pred ----------------------------------------------------------CCCCCcHHHHHHHccCcchhHH
Confidence 2468999999999998
Q ss_pred ---HHHHHHHHHHCCCccc-------cccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhH
Q 038131 375 ---TEIVEKILESFPVAIH-------DINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALH 438 (654)
Q Consensus 375 ---~eiv~~LL~~~~~~~~-------~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh 438 (654)
.+++++|++. +.+++ .+|.+|+||||+|+++|+.+++++|+++++ .+.......+.+|-|
T Consensus 203 ~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga---~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 203 KFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI---HEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT---C--------------
T ss_pred HHHHHHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC---CCchhhhhhhhhccC
Confidence 8999999997 67775 589999999999999999999999999998 466667777766644
No 42
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=8.7e-33 Score=275.48 Aligned_cols=132 Identities=15% Similarity=0.154 Sum_probs=115.2
Q ss_pred CChHHHHHHhcCCHH----HHHHHHhhCCccccC----CCCCCChHHHHHHHc---CCHHHHHHHHhhcCCCCCCC----
Q 038131 23 GSTPLHIAAGLGNVS----MCKCIATADPRLIGE----RNHENETPFFLAALH---GHKDAFLCLHYLCASVDDGY---- 87 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~----~v~~Ll~~~~~~~~~----~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~~---- 87 (654)
|+||||.||..|+.+ ++++|++.+.+ ++. +|.+|+||||+||.. |+.+++++|+++|++++...
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKY-LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCC-cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 889999999999997 66777788988 887 899999999999999 99999999999999876211
Q ss_pred --ccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccC-------------CCCHHHHHhcCCCCCccCCchHHH
Q 038131 88 --TYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQ-------------GVSPLHLLATKPNAFRSGSHLGLC 152 (654)
Q Consensus 88 --~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~-------------g~TpLh~A~~~~~~~~~~~~~~~v 152 (654)
...+|..|.||||+|+..|+.+++++|++++++ ++.+|.. |.||||+|+..| +.+++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~-------~~~~v 152 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTK-------QWDVV 152 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT-------CHHHH
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcC-------CHHHH
Confidence 112457899999999999999999999999987 8998886 999999999999 88999
Q ss_pred HHHhh---ccCccc
Q 038131 153 TGIIY---HCISVD 163 (654)
Q Consensus 153 ~~Ll~---~~~~~~ 163 (654)
++|++ .|++++
T Consensus 153 ~~Ll~~~~~ga~~n 166 (256)
T 2etb_A 153 TYLLENPHQPASLE 166 (256)
T ss_dssp HHHHHCSSCCCCTT
T ss_pred HHHHhccccCCCcC
Confidence 99988 665554
No 43
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-32 Score=281.15 Aligned_cols=147 Identities=24% Similarity=0.202 Sum_probs=130.9
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|+ ++|.+|.+|+||||+||..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 54 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 130 (299)
T 1s70_B 54 EEVLRLLERGA--DINYANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGA 130 (299)
T ss_dssp HHHHHHHHHCC--CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC--CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 68999999997 7999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcccccc--------------------------ccccCCCCHHHH
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVN--------------------------SVNEQGVSPLHL 135 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~--------------------------~~d~~g~TpLh~ 135 (654)
+++ .+|..|.||||+|+..++.++++.++.....+++ ..+..|.||||+
T Consensus 131 ~~~-----~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~ 205 (299)
T 1s70_B 131 HVG-----AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHV 205 (299)
T ss_dssp CTT-----CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHH
T ss_pred CCC-----CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHH
Confidence 998 8999999999999999999999988875443232 256778999999
Q ss_pred HhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 136 LATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 136 A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|+..| +.+++++|++.|++++
T Consensus 206 A~~~g-------~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 206 AAAKG-------YTEVLKLLIQARYDVN 226 (299)
T ss_dssp HHHHT-------CHHHHHHHHTTTCCTT
T ss_pred HHHCC-------cHHHHHHHHHcCCCCC
Confidence 99988 7888888887765543
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=1.7e-31 Score=261.79 Aligned_cols=196 Identities=22% Similarity=0.228 Sum_probs=170.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhh-cCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccc----cccccCCC
Q 038131 56 ENETPFFLAALHGHKDAFLCLHYL-CASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLV----NSVNEQGV 130 (654)
Q Consensus 56 ~G~TpLh~Aa~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~----~~~d~~g~ 130 (654)
.|+||||+||+.|+.+++++|++. |++++ .+|..|.||||+|+..|+.+++++|++.+++.. +.+|.+|.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~-----~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVH-----QRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcc-----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCc
Confidence 589999999999999999999998 99888 899999999999999999999999999998722 66788999
Q ss_pred CHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCC
Q 038131 131 SPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRG 210 (654)
Q Consensus 131 TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g 210 (654)
||||+|+..| +.+++++|+++|++++..+....
T Consensus 77 t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~~~~~~---------------------------------------- 109 (232)
T 2rfa_A 77 TALHIAVINQ-------NVNLVRALLARGASVSARATGSV---------------------------------------- 109 (232)
T ss_dssp CHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCCSGG----------------------------------------
T ss_pred CHHHHHHHcC-------CHHHHHHHHhCCCCCCcccCCcc----------------------------------------
Confidence 9999999999 89999999999888765442100
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHH
Q 038131 211 NTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREK 290 (654)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~ 290 (654)
T Consensus 110 -------------------------------------------------------------------------------- 109 (232)
T 2rfa_A 110 -------------------------------------------------------------------------------- 109 (232)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHH
Q 038131 291 KQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAA 370 (654)
Q Consensus 291 ~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa 370 (654)
++ ...+..|..|.||||+|+
T Consensus 110 ------------------------------~~------------------------------~~~~~~~~~g~t~L~~A~ 129 (232)
T 2rfa_A 110 ------------------------------FH------------------------------YRPHNLIYYGEHPLSFAA 129 (232)
T ss_dssp ------------------------------GS------------------------------CCTTCSCCCCSSHHHHHH
T ss_pred ------------------------------ee------------------------------ecccccccCCCCHHHHHH
Confidence 00 000123457999999999
Q ss_pred HcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHH----HHHHhcCccccccc------ccccCCCCcHhHHH
Q 038131 371 KNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVY----QLLLKTTIMKDSVF------RKVDDQGNSALHLA 440 (654)
Q Consensus 371 ~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv----~~Ll~~~~~~~~~~------~~~D~~G~TpLh~A 440 (654)
..|+.+++++|+++ +.+++.+|.+|+||||+|+.+|+.+++ ++|++.++ +. +.+|..|+||||+|
T Consensus 130 ~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~----~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 130 CVGSEEIVRLLIEH-GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDG----GDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTC----SCSSCCGGGCCCTTSCCHHHHH
T ss_pred HcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCC----chhhhhhhccCCCCCCCHHHHH
Confidence 99999999999997 899999999999999999999999988 99999997 44 68999999999999
Q ss_pred hhcCCCCC
Q 038131 441 ATLGDHKP 448 (654)
Q Consensus 441 a~~g~~~~ 448 (654)
++.|+.++
T Consensus 205 ~~~g~~~~ 212 (232)
T 2rfa_A 205 GVEGNIVM 212 (232)
T ss_dssp HHHTCHHH
T ss_pred HHcCCHHH
Confidence 99998544
No 45
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=8.9e-32 Score=272.57 Aligned_cols=199 Identities=11% Similarity=0.021 Sum_probs=172.4
Q ss_pred cCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHH
Q 038131 33 LGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAF 112 (654)
Q Consensus 33 ~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~ 112 (654)
..+.+-+..+|..+ + ++.+|.+|+||||+||..|+.+++++|+++|++++ .+ +|.||||+|+..|+.++++
T Consensus 9 ~~~~~~v~~lL~~~-~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~--~g~t~L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 9 TWKSKQLKSFLSSK-D-TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN-----LL--ENEFPLHQAATLEDTKIVK 79 (285)
T ss_dssp GCCHHHHHHHHHST-T-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS-----CC--TTCCHHHHHTTSSSCHHHH
T ss_pred hcCHHHHHHHHHhC-C-CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-----CC--CCCCHHHHHHHcCCHHHHH
Confidence 34444444444444 3 88999999999999999999999999999999987 45 4999999999999999999
Q ss_pred HHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHH
Q 038131 113 QIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETC 192 (654)
Q Consensus 113 ~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 192 (654)
+|++++++ ++.+|..|.||||+|+..| +.+++++|+++|++++..+
T Consensus 80 ~Ll~~ga~-~~~~d~~g~t~L~~A~~~g-------~~~~v~~Ll~~ga~~~~~~-------------------------- 125 (285)
T 3kea_A 80 ILLFSGLD-DSQFDDKGNTALYYAVDSG-------NMQTVKLFVKKNWRLMFYG-------------------------- 125 (285)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHHCGGGGGCS--------------------------
T ss_pred HHHHCCCC-CCCcCCCCCcHHHHHHHcC-------CHHHHHHHHhcCCCCCccC--------------------------
Confidence 99999998 9999999999999999999 8999999988776654222
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhH
Q 038131 193 LNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKA 272 (654)
Q Consensus 193 ~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~ 272 (654)
T Consensus 126 -------------------------------------------------------------------------------- 125 (285)
T 3kea_A 126 -------------------------------------------------------------------------------- 125 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhcccc
Q 038131 273 MLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKT 352 (654)
Q Consensus 273 ~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (654)
T Consensus 126 -------------------------------------------------------------------------------- 125 (285)
T 3kea_A 126 -------------------------------------------------------------------------------- 125 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCC-CcHHHHHHHcChHHHHHHHHHHCCCccccccC-CCCchhHHHHHcCChHHHHHHHhcCccccccccccc
Q 038131 353 GSTIPDMAKR-ETPILIAAKNGITEIVEKILESFPVAIHDINS-EKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVD 430 (654)
Q Consensus 353 ~~~~~~~~~g-~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~-~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D 430 (654)
..| .||||+|+..|+.+++++|++.. .+. .|. .|+||||+|+.+|+.+++++|+++++ +++.+|
T Consensus 126 -------~~g~~t~L~~A~~~~~~~~v~~Ll~~g-~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga----d~n~~~ 191 (285)
T 3kea_A 126 -------KTGWKTSFYHAVMLNDVSIVSYFLSEI-PST--FDLAILLSCIHITIKNGHVDMMILLLDYMT----STNTNN 191 (285)
T ss_dssp -------SSGGGSHHHHHHHTTCHHHHHHHHTTS-CTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHH----HTCTTC
T ss_pred -------CCCCCCHHHHHHHcCCHHHHHHHHhCC-Ccc--ccccCCccHHHHHHHcChHHHHHHHHHcCC----CCCccc
Confidence 346 79999999999999999999974 333 333 89999999999999999999999998 999999
Q ss_pred CCCCcH-hHHHhhcCCCCC
Q 038131 431 DQGNSA-LHLAATLGDHKP 448 (654)
Q Consensus 431 ~~G~Tp-Lh~Aa~~g~~~~ 448 (654)
..|+|| ||+|++.|+.++
T Consensus 192 ~~g~t~~L~~A~~~~~~~~ 210 (285)
T 3kea_A 192 SLLFIPDIKLAIDNKDIEM 210 (285)
T ss_dssp CCBCCTTHHHHHHHTCHHH
T ss_pred CCCCChHHHHHHHcCCHHH
Confidence 999998 999999998443
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=6.3e-33 Score=272.92 Aligned_cols=197 Identities=18% Similarity=0.180 Sum_probs=165.3
Q ss_pred cCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCC
Q 038131 51 GERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGV 130 (654)
Q Consensus 51 ~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 130 (654)
+.+|.+|+||||+|+..|+.+++++|++.+.... .+++.+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 79 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDL-AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGN 79 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----C-CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccH-HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCC
Confidence 3578999999999999999999999999887421 22348999999999999999999999999999987 999999999
Q ss_pred CHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCC
Q 038131 131 SPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRG 210 (654)
Q Consensus 131 TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g 210 (654)
||||+|+..| +.++++.|++.+.+.+...
T Consensus 80 t~L~~A~~~~-------~~~~v~~Ll~~~~~~~~~~-------------------------------------------- 108 (236)
T 1ikn_D 80 TPLHLACEQG-------CLASVGVLTQSCTTPHLHS-------------------------------------------- 108 (236)
T ss_dssp CHHHHHHHHT-------CHHHHHHHHHSTTTTSSSC--------------------------------------------
T ss_pred CHHHHHHHcC-------CHHHHHHHHhcccchhHHH--------------------------------------------
Confidence 9999999999 8999999987765432111
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHH
Q 038131 211 NTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREK 290 (654)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~ 290 (654)
T Consensus 109 -------------------------------------------------------------------------------- 108 (236)
T 1ikn_D 109 -------------------------------------------------------------------------------- 108 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHH
Q 038131 291 KQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAA 370 (654)
Q Consensus 291 ~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa 370 (654)
..+..+..|.||||+|+
T Consensus 109 ---------------------------------------------------------------~~~~~~~~g~t~L~~A~ 125 (236)
T 1ikn_D 109 ---------------------------------------------------------------ILKATNYNGHTCLHLAS 125 (236)
T ss_dssp ---------------------------------------------------------------GGGCCCTTCCCHHHHHH
T ss_pred ---------------------------------------------------------------HhhccCCCCCCHHHHHH
Confidence 00112357899999999
Q ss_pred HcChHHHHHHHHHHCCCccccccC-CCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCCCC
Q 038131 371 KNGITEIVEKILESFPVAIHDINS-EKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 371 ~~G~~eiv~~LL~~~~~~~~~~d~-~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
..|+.+++++|++. +.+++.+|. .|+||||+|+..|+.+++++|+++++ +++.+|..|+||||+|+..|+.++
T Consensus 126 ~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~tpl~~A~~~~~~~~ 199 (236)
T 1ikn_D 126 IHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA----DVNRVTYQGYSPYQLTWGRPSTRI 199 (236)
T ss_dssp HTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC----CSCCCCTTCCCGGGGCTTSSCHHH
T ss_pred HcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----CCCcccCCCCCHHHHHHccCchHH
Confidence 99999999999998 888999998 99999999999999999999999998 999999999999999999998544
No 47
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.2e-31 Score=244.80 Aligned_cols=147 Identities=24% Similarity=0.315 Sum_probs=137.8
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|+ ++|.+|.+|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+||..|+.++|++|+++|+
T Consensus 18 ~~v~~Ll~~Ga--dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 94 (169)
T 4gpm_A 18 DRVKDLIENGA--DVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 94 (169)
T ss_dssp HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 68999999998 7999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .+|.+|+||||+|++.|+.+++++|++.+++ ++.+|.+|+||||+|+++| +.+++++|+++|++
T Consensus 95 dvn-----~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g-------~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 95 DVN-----AKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAREHG-------NEEVVKLLEKQGGW 161 (169)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHTC---
T ss_pred CCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcC-------CHHHHHHHHHCCCC
Confidence 998 8999999999999999999999999999998 9999999999999999999 89999999999999
Q ss_pred ccc
Q 038131 162 VDK 164 (654)
Q Consensus 162 ~~~ 164 (654)
++.
T Consensus 162 ie~ 164 (169)
T 4gpm_A 162 LEH 164 (169)
T ss_dssp ---
T ss_pred cCC
Confidence 874
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=9.2e-31 Score=242.54 Aligned_cols=125 Identities=26% Similarity=0.318 Sum_probs=119.3
Q ss_pred hHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHH
Q 038131 25 TPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAIS 104 (654)
Q Consensus 25 T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~ 104 (654)
++|+.||+.|+.++|+.||+.|++ ++.+|.+|+||||+|+..|+.+++++|+++|++++ .+|.+|.||||+|++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~-----~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVN-----AKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchh-----hhccCCCCHHHHHHH
Confidence 579999999999999999999998 99999999999999999999999999999999998 899999999999999
Q ss_pred cCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 105 GDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 105 ~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
.|+.+++++|++++++ ++.+|.+|+||||+|+..| +.+++++|+++|++++
T Consensus 80 ~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g-------~~~~v~~Ll~~gad~~ 130 (169)
T 4gpm_A 80 NGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENG-------HKEVVKLLISKGADVN 130 (169)
T ss_dssp TTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred cCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCcc
Confidence 9999999999999998 9999999999999999999 8999999988776654
No 49
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=1.3e-31 Score=267.48 Aligned_cols=135 Identities=16% Similarity=0.099 Sum_probs=113.6
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHH----hhCCccccCCC----CCCChHHHHHH---HcCCHHHHHHHHhhcCCCCC---
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIA----TADPRLIGERN----HENETPFFLAA---LHGHKDAFLCLHYLCASVDD--- 85 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll----~~~~~~~~~~d----~~G~TpLh~Aa---~~g~~~iv~~Ll~~g~~~~~--- 85 (654)
+..|+|+||.||..|+.+.++.|+ +.+++ ++..+ .+|+||||+|+ +.|+.+++++|++.|++.+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-LTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-TTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-cchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 456899999999999999555544 58887 77665 77999999999 77999999999999976431
Q ss_pred ---CCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccc--------------cCCCCHHHHHhcCCCCCccCCc
Q 038131 86 ---GYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVN--------------EQGVSPLHLLATKPNAFRSGSH 148 (654)
Q Consensus 86 ---~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d--------------~~g~TpLh~A~~~~~~~~~~~~ 148 (654)
...+..|..|.||||+|+..|+.+++++|++++++ ++.+| ..|.||||+|+..| +
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g-------~ 152 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTN-------Q 152 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT-------C
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcC-------C
Confidence 22335666999999999999999999999999987 89988 68999999999999 8
Q ss_pred hHHHHHHhh---ccCccc
Q 038131 149 LGLCTGIIY---HCISVD 163 (654)
Q Consensus 149 ~~~v~~Ll~---~~~~~~ 163 (654)
.+++++|++ .|++++
T Consensus 153 ~~~v~~Ll~~~~~ga~~~ 170 (260)
T 3jxi_A 153 PHIVHYLTENGHKQADLR 170 (260)
T ss_dssp HHHHHHHHHCSSCCCCTT
T ss_pred HHHHHHHHhccccCCCCc
Confidence 999999988 565543
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=2.7e-30 Score=247.23 Aligned_cols=185 Identities=19% Similarity=0.181 Sum_probs=165.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhcC-CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCH
Q 038131 54 NHENETPFFLAALHGHKDAFLCLHYLCA-SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSP 132 (654)
Q Consensus 54 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~Tp 132 (654)
+..+.||||.|+..|+.++++.|++.+. +++ ..|..|.||||+|++.|+.+++++|++.+++ ++.+|..|.||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 75 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVD-----EVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSP 75 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 4578999999999999999999999887 777 8999999999999999999999999999998 99999999999
Q ss_pred HHHHhcCCCCCccCCchHHHHHHhhcc-CcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCC
Q 038131 133 LHLLATKPNAFRSGSHLGLCTGIIYHC-ISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGN 211 (654)
Q Consensus 133 Lh~A~~~~~~~~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~ 211 (654)
||+|+..| +.+++++|++.+ .+++
T Consensus 76 l~~A~~~~-------~~~~~~~Ll~~~~~~~~------------------------------------------------ 100 (201)
T 3hra_A 76 YLYAGAQG-------RTEILAYMLKHATPDLN------------------------------------------------ 100 (201)
T ss_dssp HHHHHHTT-------CHHHHHHHHHHSCCCTT------------------------------------------------
T ss_pred HHHHHHcC-------CHHHHHHHHhccCcccc------------------------------------------------
Confidence 99999999 788888887432 1111
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHh
Q 038131 212 TKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKK 291 (654)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (654)
T Consensus 101 -------------------------------------------------------------------------------- 100 (201)
T 3hra_A 101 -------------------------------------------------------------------------------- 100 (201)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHH
Q 038131 292 QKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAK 371 (654)
Q Consensus 292 ~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~ 371 (654)
..|..|.||||.|+.
T Consensus 101 -----------------------------------------------------------------~~~~~g~t~L~~A~~ 115 (201)
T 3hra_A 101 -----------------------------------------------------------------KHNRYGGNALIPAAE 115 (201)
T ss_dssp -----------------------------------------------------------------CCCTTSCCSHHHHHH
T ss_pred -----------------------------------------------------------------cccCCCCcHHHHHHH
Confidence 123568999999999
Q ss_pred cChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCC-----hHHHHHHHhcCcccccccccccCCCCcHhHHHhhcCCC
Q 038131 372 NGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQ-----PHVYQLLLKTTIMKDSVFRKVDDQGNSALHLAATLGDH 446 (654)
Q Consensus 372 ~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~-----~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~Aa~~g~~ 446 (654)
.|+.+++++|++..+.+++.+|..|+||||+|+..++ .+++++|+++++ +++.+|.+|+||||+|++.|+.
T Consensus 116 ~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 116 KGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA----DQSIKDNSGRTAMDYANQKGYT 191 (201)
T ss_dssp TTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC----CTTCCCTTSCCHHHHHHHHTCH
T ss_pred cCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC----CCCccCCCCCCHHHHHHHcCCH
Confidence 9999999999999669999999999999999999998 999999999998 9999999999999999999984
Q ss_pred CC
Q 038131 447 KP 448 (654)
Q Consensus 447 ~~ 448 (654)
++
T Consensus 192 ~~ 193 (201)
T 3hra_A 192 EI 193 (201)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 51
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.5e-31 Score=274.84 Aligned_cols=127 Identities=19% Similarity=0.149 Sum_probs=107.1
Q ss_pred hhHHHHHhccccccccc-CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCC---HHHHHHHH
Q 038131 2 DLVGIIQEKQQLKVLKI-GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGH---KDAFLCLH 77 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~-~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~---~~iv~~Ll 77 (654)
+++++|++.|. ++|. +|.+|+||||+||..|+.++|++|+++|++ ++.+|.+|+||||+|+..|+ .++++.|+
T Consensus 111 ~~~~~l~~~g~--dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 111 EVNDAFPNTQL--NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp HHHHHCTTSCC--CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred HHHHHHHhcCC--CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHH
Confidence 67888998888 7999 899999999999999999999999999998 99999999999999999999 78999999
Q ss_pred hhc-CCCCCCCccccCCCCCcHHHHHHH----cCCHHHHHHHHHhc--------------------cccccccccCCCCH
Q 038131 78 YLC-ASVDDGYTYSRRNEGDTVLHCAIS----GDYFDLAFQIIHRC--------------------EKLVNSVNEQGVSP 132 (654)
Q Consensus 78 ~~g-~~~~~~~~~~~~~~g~T~Lh~A~~----~g~~~~v~~Ll~~~--------------------~~~~~~~d~~g~Tp 132 (654)
+.+ ++++ .+|..|.||||+|++ .|+.+++++|++.+ ++ ++.+|..|.||
T Consensus 188 ~~~~~~~~-----~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~-~~~~~~~g~t~ 261 (327)
T 1sw6_A 188 DYLYPCLI-----LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK-PNDKNGERKDS 261 (327)
T ss_dssp HHHGGGGG-----EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CH
T ss_pred Hhhhcccc-----CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC-cccccccCCCh
Confidence 987 5565 899999999999999 99999999999884 44 77777888888
Q ss_pred HHHHh
Q 038131 133 LHLLA 137 (654)
Q Consensus 133 Lh~A~ 137 (654)
||.|+
T Consensus 262 L~~a~ 266 (327)
T 1sw6_A 262 ILENL 266 (327)
T ss_dssp HHHHC
T ss_pred hHHHH
Confidence 88776
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=6.8e-31 Score=261.73 Aligned_cols=196 Identities=18% Similarity=0.172 Sum_probs=167.5
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHhhcCCCCCCCccc----cCCCCCcHHHHHHHc---CCHHHHHHHHHhccccccc
Q 038131 56 ENETPFFLAALHGHKD----AFLCLHYLCASVDDGYTYS----RRNEGDTVLHCAISG---DYFDLAFQIIHRCEKLVNS 124 (654)
Q Consensus 56 ~G~TpLh~Aa~~g~~~----iv~~Ll~~g~~~~~~~~~~----~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~ 124 (654)
.|+||||+||..|+.+ ++++|++.|++++ . +|..|.||||+|+.. |+.+++++|++.+++ ++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~-----~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~-~~~ 74 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLT-----DSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD-SGN 74 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTT-----SGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH-TTC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcc-----cccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCc-ccc
Confidence 4899999999999997 6678888999998 6 799999999999999 999999999999887 442
Q ss_pred -----------cccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHh
Q 038131 125 -----------VNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCL 193 (654)
Q Consensus 125 -----------~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~ 193 (654)
+|..|.||||+|+..| +.+++++|+++|++++..+....
T Consensus 75 ~~~~~~~~~~~~d~~g~t~L~~A~~~g-------~~~~v~~Ll~~ga~~~~~~~~~~----------------------- 124 (256)
T 2etb_A 75 PKPLVNAQCTDEFYQGHSALHIAIEKR-------SLQCVKLLVENGADVHLRACGRF----------------------- 124 (256)
T ss_dssp SSCGGGCCCCSTTTTTCCHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCCSGG-----------------------
T ss_pred hhhhcccccccccccCCCHHHHHHHcC-------CHHHHHHHHHcCCCCCccccccc-----------------------
Confidence 3478999999999999 89999999999988876552100
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHH
Q 038131 194 NFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAM 273 (654)
Q Consensus 194 ~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~ 273 (654)
T Consensus 125 -------------------------------------------------------------------------------- 124 (256)
T 2etb_A 125 -------------------------------------------------------------------------------- 124 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccC
Q 038131 274 LVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTG 353 (654)
Q Consensus 274 ~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (654)
.+ .
T Consensus 125 ---------------------------------------------~~--------------------------------~ 127 (256)
T 2etb_A 125 ---------------------------------------------FQ--------------------------------K 127 (256)
T ss_dssp ---------------------------------------------GS--------------------------------C
T ss_pred ---------------------------------------------cc--------------------------------c
Confidence 00 0
Q ss_pred CCccccCCCCcHHHHHHHcChHHHHHHHHHH--CCCccccccCCCCchhHHHHH--cCChH-------HHHHHHhcCccc
Q 038131 354 STIPDMAKRETPILIAAKNGITEIVEKILES--FPVAIHDINSEKKNIVLLAVE--NRQPH-------VYQLLLKTTIMK 422 (654)
Q Consensus 354 ~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~--~~~~~~~~d~~G~T~Lh~Av~--~~~~~-------iv~~Ll~~~~~~ 422 (654)
..+..|..|.||||+|+..|+.+++++|++. .+.+++.+|.+|+||||+|+. +++.+ ++++|+++++
T Consensus 128 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga-- 205 (256)
T 2etb_A 128 HQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA-- 205 (256)
T ss_dssp CSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH--
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC--
Confidence 0011235699999999999999999999994 489999999999999999999 88888 9999999998
Q ss_pred cccc-------ccccCCCCcHhHHHhhcCCCCC
Q 038131 423 DSVF-------RKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 423 ~~~~-------~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
++ +.+|..|+||||+|++.|+.++
T Consensus 206 --~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 206 --RLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp --HHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred --CcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 77 9999999999999999998544
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.5e-30 Score=261.81 Aligned_cols=208 Identities=18% Similarity=0.179 Sum_probs=166.8
Q ss_pred ccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCcc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHhcccc-
Q 038131 50 IGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTY----SRRNEGDTVLHCAISG---DYFDLAFQIIHRCEKL- 121 (654)
Q Consensus 50 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~----~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~- 121 (654)
.+..|..|+||||+||+.|+.++|+.|++.+.+.. .+++ .+|..|.||||+|+.. |+.+++++|++.+++.
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSK-KRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSC-CCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcc-cccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 56789999999999999999999999998654322 1111 3588999999999987 9999999999998751
Q ss_pred -----ccc----cccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHH
Q 038131 122 -----VNS----VNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETC 192 (654)
Q Consensus 122 -----~~~----~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~ 192 (654)
++. +|..|.||||+|+..| +.+++++|+++|++++..+.....
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g-------~~~~v~~Ll~~ga~~~~~~~~~~~--------------------- 136 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERR-------NMTLVTLLVENGADVQAAANGDFF--------------------- 136 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTT-------CHHHHHHHHHTTCCTTCCBCSGGG---------------------
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcC-------CHHHHHHHHHCCCCcCcccccccc---------------------
Confidence 222 6779999999999999 999999999999888765521000
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhH
Q 038131 193 LNFIRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKA 272 (654)
Q Consensus 193 ~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~ 272 (654)
T Consensus 137 -------------------------------------------------------------------------------- 136 (273)
T 2pnn_A 137 -------------------------------------------------------------------------------- 136 (273)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhcccc
Q 038131 273 MLVILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKT 352 (654)
Q Consensus 273 ~~~~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (654)
. .
T Consensus 137 ---------------------------------~------~--------------------------------------- 138 (273)
T 2pnn_A 137 ---------------------------------K------K--------------------------------------- 138 (273)
T ss_dssp ---------------------------------S------S---------------------------------------
T ss_pred ---------------------------------c------c---------------------------------------
Confidence 0 0
Q ss_pred CCCccccCCCCcHHHHHHHcChHHHHHHHHHH--CCCccccccCCCCchhHHHHHcCC---------hHHHHHHHhcCcc
Q 038131 353 GSTIPDMAKRETPILIAAKNGITEIVEKILES--FPVAIHDINSEKKNIVLLAVENRQ---------PHVYQLLLKTTIM 421 (654)
Q Consensus 353 ~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~--~~~~~~~~d~~G~T~Lh~Av~~~~---------~~iv~~Ll~~~~~ 421 (654)
......+..|.||||+|+..|+.+++++|++. .+.+++.+|.+|+||||+|+..|+ .+++++|++.++
T Consensus 139 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga- 217 (273)
T 2pnn_A 139 TKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA- 217 (273)
T ss_dssp CSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH-
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh-
Confidence 00011235799999999999999999999994 489999999999999999999998 799999999998
Q ss_pred cccccc-------cccCCCCcHhHHHhhcCCCCC
Q 038131 422 KDSVFR-------KVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 422 ~~~~~~-------~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
+++ .+|.+|+||||+|++.|+.++
T Consensus 218 ---~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~i 248 (273)
T 2pnn_A 218 ---KLHPTLKLEEITNRKGLTPLALAASSGKIGV 248 (273)
T ss_dssp ---HHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred ---hcccccccccccCCCCCCHHHHHHHhChHHH
Confidence 775 599999999999999998444
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=3e-30 Score=259.95 Aligned_cols=129 Identities=10% Similarity=0.114 Sum_probs=109.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCc-cccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC-CCCCCCccccCCCCCcHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATADPR-LIGERNHENETPFFLAALHGHKDAFLCLHYLCA-SVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~-~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~g~T~L 99 (654)
.+++++|.|+..|+.+.++.+++.+.+ .+|.+|.+|+||||+||..|+.+++++|++.|+ +++ ..|..|.|||
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~-----~~~~~g~tpL 149 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVD-----KQNRAGYSPI 149 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTT-----CCCTTSCCHH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCC-----CCCCCCCCHH
Confidence 356788899999999999988876543 378889999999999999999999999999998 777 8899999999
Q ss_pred HHHH-----HcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 100 HCAI-----SGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 100 h~A~-----~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|+|+ ..++.++++.|++.+.. .+..|..|.||||+|+..| +.+++++|++.|++++
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g-------~~~~v~~Ll~~gad~n 210 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHG-------RVDVVKALLACEADVN 210 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcC-------CHHHHHHHHhCCCCCC
Confidence 9999 66788999999999876 7888888999999999988 7888888887776654
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=6.8e-32 Score=263.87 Aligned_cols=146 Identities=16% Similarity=0.069 Sum_probs=112.7
Q ss_pred HHHHHhccc-ccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCC
Q 038131 4 VGIIQEKQQ-LKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCAS 82 (654)
Q Consensus 4 v~~Ll~~~~-~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~ 82 (654)
|+.|+++++ +...+..+.+|.||||+||..|+.+++++|++.+++ ++.+|..|+||||+||..|+.+++++|+++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 456777766 223445566788889999999999999999998887 888999999999999999999999999999988
Q ss_pred CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccc-cCCCCHHHHH--hcCCCCCccCCchHHHHHHhhcc
Q 038131 83 VDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVN-EQGVSPLHLL--ATKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 83 ~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~A--~~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
++ .+|..|.||||+|+..|+.+++++|++.+++ ++.++ .+|.||||+| +..+ +.+++++|++.|
T Consensus 80 ~n-----~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~-------~~~~v~~Ll~~g 146 (229)
T 2vge_A 80 VN-----SPDSHGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREG-------YADCATYLADVE 146 (229)
T ss_dssp TT-----CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTT-------HHHHHHHHHHHH
T ss_pred CC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcC-------hHHHHHHHHHcC
Confidence 88 8888999999999999999999999988887 77765 5888888888 6666 677777776666
Q ss_pred Cccc
Q 038131 160 ISVD 163 (654)
Q Consensus 160 ~~~~ 163 (654)
++++
T Consensus 147 a~~~ 150 (229)
T 2vge_A 147 QSMG 150 (229)
T ss_dssp HHTT
T ss_pred CCcc
Confidence 5544
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=5.1e-29 Score=232.20 Aligned_cols=124 Identities=19% Similarity=0.231 Sum_probs=99.2
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHH
Q 038131 23 GSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCA 102 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A 102 (654)
+.||||.||..|+.++++.|++.++..++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-----ILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-----CCCTTCCCHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-----hhcccCCCHHHHH
Confidence 46899999999999999999999888788889999999999999999999999999998888 7888899999999
Q ss_pred HHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhcc
Q 038131 103 ISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 103 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
+..|+.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|+++|
T Consensus 77 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g 125 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGN-------HVKCVEALLARG 125 (172)
T ss_dssp HHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTT
T ss_pred HHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcC
Confidence 999999999988888776 6666666666666666555 455555554444
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=5e-29 Score=236.77 Aligned_cols=135 Identities=17% Similarity=0.212 Sum_probs=127.6
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
.+|.+|..|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~ 100 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN-----TKDFS 100 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-----CCCTT
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCC-----CCCCC
Confidence 4788999999999999999999999999999988 89999999999999999999999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.+++++|+++|++++
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYG-------RSEIVKKLLELGADIS 161 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHT-------CHHHHHHHHHTTCCTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHCCCCCC
Confidence 99999999999999999999999987 9999999999999999999 8899999988776554
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.1e-28 Score=234.32 Aligned_cols=164 Identities=23% Similarity=0.261 Sum_probs=151.1
Q ss_pred cccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccC
Q 038131 49 LIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQ 128 (654)
Q Consensus 49 ~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 128 (654)
+++.+|..|+||||+||..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 100 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLE-----DKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFS 100 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTT
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccc-----cccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCC
Confidence 377899999999999999999999999999999988 8999999999999999999999999999987 9999999
Q ss_pred CCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhc
Q 038131 129 GVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSN 208 (654)
Q Consensus 129 g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~ 208 (654)
|.||||+|+..+ +.+++++|++.|++++..
T Consensus 101 g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~~~------------------------------------------- 130 (192)
T 2rfm_A 101 GKTPLMWSIIFG-------YSEMSYFLLEHGANVNDR------------------------------------------- 130 (192)
T ss_dssp SCCHHHHHHHHT-------CHHHHHHHHHTTCCSSCC-------------------------------------------
T ss_pred CCcHHHHHHHcC-------CHHHHHHHHHCCCCCCCC-------------------------------------------
Confidence 999999999998 888888888776554322
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHH
Q 038131 209 RGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIR 288 (654)
Q Consensus 209 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~ 288 (654)
T Consensus 131 -------------------------------------------------------------------------------- 130 (192)
T 2rfm_A 131 -------------------------------------------------------------------------------- 130 (192)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHH
Q 038131 289 EKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILI 368 (654)
Q Consensus 289 ~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~ 368 (654)
|..|.||||+
T Consensus 131 ----------------------------------------------------------------------~~~g~t~L~~ 140 (192)
T 2rfm_A 131 ----------------------------------------------------------------------NLEGETPLIV 140 (192)
T ss_dssp ----------------------------------------------------------------------CTTCCCHHHH
T ss_pred ----------------------------------------------------------------------CCCCCCHHHH
Confidence 2468999999
Q ss_pred HHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcC
Q 038131 369 AAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTT 419 (654)
Q Consensus 369 Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~ 419 (654)
|+..|+.+++++|++. +.+++.+|..|+||||+|+.+|+.+++++|++.+
T Consensus 141 A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 141 ASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999997 8999999999999999999999999999999875
No 59
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=4.1e-29 Score=249.40 Aligned_cols=204 Identities=19% Similarity=0.180 Sum_probs=165.6
Q ss_pred CCCCChHHHHHHHcCCHHH----HHHHHhhcCCCCCCCccccCCCCCcHHHHHH---HcCCHHHHHHHHHhccc------
Q 038131 54 NHENETPFFLAALHGHKDA----FLCLHYLCASVDDGYTYSRRNEGDTVLHCAI---SGDYFDLAFQIIHRCEK------ 120 (654)
Q Consensus 54 d~~G~TpLh~Aa~~g~~~i----v~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~---~~g~~~~v~~Ll~~~~~------ 120 (654)
|..|+||||.||+.|+.++ +++|++.|++++. .-...|..|.||||+|+ +.|+.+++++|++.+++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~-~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTD-EEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTS-GGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcch-hhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 5689999999999999995 5555559998871 11123478999999999 77999999999998764
Q ss_pred ----cccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHH
Q 038131 121 ----LVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFI 196 (654)
Q Consensus 121 ----~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~ 196 (654)
..+.+|..|.||||+|+..| +.+++++|+++|++++..+.....
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g-------~~~~v~~Ll~~ga~~~~~~~~~~~------------------------- 128 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERR-------CKHYVELLVEKGADVHAQARGRFF------------------------- 128 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTT-------CHHHHHHHHHTTCCTTCCCEECCC-------------------------
T ss_pred hhcccccccccCCCCHHHHHHHcC-------CHHHHHHHHhCCCCcCcccccccc-------------------------
Confidence 13455669999999999999 999999999999888765521000
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHH
Q 038131 197 RLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVI 276 (654)
Q Consensus 197 ~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~ 276 (654)
T Consensus 129 -------------------------------------------------------------------------------- 128 (260)
T 3jxi_A 129 -------------------------------------------------------------------------------- 128 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCc
Q 038131 277 LALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTI 356 (654)
Q Consensus 277 ~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (654)
...|. .
T Consensus 129 ----------------------------------~~~~~----------------------------------------~ 134 (260)
T 3jxi_A 129 ----------------------------------QPKDE----------------------------------------G 134 (260)
T ss_dssp ----------------------------------SSSCC----------------------------------------C
T ss_pred ----------------------------------Ccccc----------------------------------------c
Confidence 00000 1
Q ss_pred cccCCCCcHHHHHHHcChHHHHHHHHHH--CCCccccccCCCCchhHHHHHcCC---------hHHHHHHHhcCcccccc
Q 038131 357 PDMAKRETPILIAAKNGITEIVEKILES--FPVAIHDINSEKKNIVLLAVENRQ---------PHVYQLLLKTTIMKDSV 425 (654)
Q Consensus 357 ~~~~~g~tpLh~Aa~~G~~eiv~~LL~~--~~~~~~~~d~~G~T~Lh~Av~~~~---------~~iv~~Ll~~~~~~~~~ 425 (654)
..+..|+||||+|+..|+.++|++|++. .+.+++.+|.+|+||||+|++.++ .+++++|+++++ +
T Consensus 135 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga----~ 210 (260)
T 3jxi_A 135 GYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCA----K 210 (260)
T ss_dssp CSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH----H
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCc----c
Confidence 1225799999999999999999999994 489999999999999999999888 799999999998 6
Q ss_pred c-------ccccCCCCcHhHHHhhcCCCCC
Q 038131 426 F-------RKVDDQGNSALHLAATLGDHKP 448 (654)
Q Consensus 426 ~-------~~~D~~G~TpLh~Aa~~g~~~~ 448 (654)
+ +.+|.+|+||||+|++.|+.++
T Consensus 211 ~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 211 LFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred cccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 6 7899999999999999999544
No 60
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=247.58 Aligned_cols=148 Identities=18% Similarity=0.233 Sum_probs=133.8
Q ss_pred hHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHH-----HcCCHHHHHHHH
Q 038131 3 LVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAA-----LHGHKDAFLCLH 77 (654)
Q Consensus 3 iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa-----~~g~~~iv~~Ll 77 (654)
.++.+++.+....+|.+|.+|+||||+||..|+.+++++|++.|+..++.+|..|.||||+|+ ..++.+++++|+
T Consensus 91 ~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll 170 (276)
T 4hbd_A 91 TFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLF 170 (276)
T ss_dssp HHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHH
Confidence 455666666555699999999999999999999999999999999559999999999999999 678899999999
Q ss_pred hhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhh
Q 038131 78 YLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIY 157 (654)
Q Consensus 78 ~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~ 157 (654)
+.|.+.+ ..+..|.||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+..| +.+++++|++
T Consensus 171 ~~g~~~~-----~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g-------~~~iv~~Ll~ 237 (276)
T 4hbd_A 171 RLGNINA-----KASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHG-------HKEIAGLLLA 237 (276)
T ss_dssp HHSCTTC-----CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT-------CHHHHHHHHT
T ss_pred HcCCCcc-----ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCC-------CHHHHHHHHh
Confidence 9999887 7899999999999999999999999999998 9999999999999999999 8899998887
Q ss_pred -ccCccc
Q 038131 158 -HCISVD 163 (654)
Q Consensus 158 -~~~~~~ 163 (654)
.|++++
T Consensus 238 ~~gad~~ 244 (276)
T 4hbd_A 238 VPSCDIS 244 (276)
T ss_dssp STTCCTT
T ss_pred cCCCCCc
Confidence 565543
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=7.3e-28 Score=223.16 Aligned_cols=128 Identities=20% Similarity=0.173 Sum_probs=120.8
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHC 101 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~ 101 (654)
.|.||||.||..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ-----LLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-----CcCCCCCcHHHH
Confidence 589999999999999999999999987 99999999999999999999999999999999998 899999999999
Q ss_pred HHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 102 AISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 102 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.+++++|+++|++++
T Consensus 76 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~ 129 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGN-------HVKCVKMLLESGADPT 129 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCC
Confidence 9999999999999999987 9999999999999999999 8899999887766553
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=3.3e-28 Score=226.71 Aligned_cols=169 Identities=14% Similarity=0.070 Sum_probs=147.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhcCC-CCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHH
Q 038131 57 NETPFFLAALHGHKDAFLCLHYLCAS-VDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHL 135 (654)
Q Consensus 57 G~TpLh~Aa~~g~~~iv~~Ll~~g~~-~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 135 (654)
+.||||.||..|+.++++.|++.+.+ ++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVN-----KPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGG-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccccc-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHH
Confidence 56899999999999999999999886 44 7899999999999999999999999999987 99999999999999
Q ss_pred HhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCC
Q 038131 136 LATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKE 215 (654)
Q Consensus 136 A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~ 215 (654)
|+..+ +.+++++|+++|++++..
T Consensus 76 A~~~~-------~~~~v~~Ll~~g~~~~~~-------------------------------------------------- 98 (172)
T 3v30_A 76 ASTGG-------YTDIVGLLLERDVDINIY-------------------------------------------------- 98 (172)
T ss_dssp HHHTT-------CHHHHHHHHTTTCCTTCC--------------------------------------------------
T ss_pred HHHCC-------CHHHHHHHHHcCCCCCCC--------------------------------------------------
Confidence 99999 889999998776554322
Q ss_pred CCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhh
Q 038131 216 QTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHT 295 (654)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 295 (654)
T Consensus 99 -------------------------------------------------------------------------------- 98 (172)
T 3v30_A 99 -------------------------------------------------------------------------------- 98 (172)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChH
Q 038131 296 WSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGIT 375 (654)
Q Consensus 296 ~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~ 375 (654)
|..|+||||+|+..|+.
T Consensus 99 ---------------------------------------------------------------~~~g~t~L~~A~~~~~~ 115 (172)
T 3v30_A 99 ---------------------------------------------------------------DWNGGTPLLYAVRGNHV 115 (172)
T ss_dssp ---------------------------------------------------------------CTTSCCHHHHHHHTTCH
T ss_pred ---------------------------------------------------------------CCCCCCHHHHHHHcCCH
Confidence 24688999999999999
Q ss_pred HHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcH
Q 038131 376 EIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSA 436 (654)
Q Consensus 376 eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~Tp 436 (654)
+++++|++. +.+++.+|.+|+||||+|+..|+.+++++|+++++ ++..++..|.||
T Consensus 116 ~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~----~~~~~~~~~~~p 171 (172)
T 3v30_A 116 KCVEALLAR-GADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL----KLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH----HHSCC-------
T ss_pred HHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH----HHhcccCCCCCC
Confidence 999999996 89999999999999999999999999999999998 888899999887
No 63
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=7.9e-30 Score=249.22 Aligned_cols=199 Identities=16% Similarity=0.149 Sum_probs=164.1
Q ss_pred HHHHHhhCCccccC---CCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHH
Q 038131 39 CKCIATADPRLIGE---RNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQII 115 (654)
Q Consensus 39 v~~Ll~~~~~~~~~---~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll 115 (654)
++.|++++++ ++. .+.+|.||||+||..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+++++|+
T Consensus 1 v~~ll~~~~~-~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKAGS-PRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPS-----QPNEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp ---------C-CCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CeehhccCCC-CccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCC-----CCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4678888876 443 45567789999999999999999999999998 89999999999999999999999999
Q ss_pred HhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhH
Q 038131 116 HRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNF 195 (654)
Q Consensus 116 ~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 195 (654)
+.+++ ++.+|..|.||||+|+..| +.+++++|++.|++++..+
T Consensus 75 ~~ga~-~n~~d~~g~tpLh~A~~~g-------~~~~v~~Ll~~ga~~~~~~----------------------------- 117 (229)
T 2vge_A 75 TAGAN-VNSPDSHGWTPLHCAASCN-------DTVICMALVQHGAAIFATT----------------------------- 117 (229)
T ss_dssp HTTCC-TTCCCTTCCCHHHHHHHTT-------CHHHHHHHHTTTCCTTCCC-----------------------------
T ss_pred HCCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCccccc-----------------------------
Confidence 99987 9999999999999999999 8999999988776654322
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHH
Q 038131 196 IRLLKTMFIVLSNRGNTKKEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLV 275 (654)
Q Consensus 196 ~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~ 275 (654)
T Consensus 118 -------------------------------------------------------------------------------- 117 (229)
T 2vge_A 118 -------------------------------------------------------------------------------- 117 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhchHHHHHHHHHhhhhhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCC
Q 038131 276 ILALGSTKIRKIREKKQKHTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGST 355 (654)
Q Consensus 276 ~~~~g~~~~~~~~~~~~~~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (654)
T Consensus 118 -------------------------------------------------------------------------------- 117 (229)
T 2vge_A 118 -------------------------------------------------------------------------------- 117 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcHHHHH--HHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCC
Q 038131 356 IPDMAKRETPILIA--AKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQG 433 (654)
Q Consensus 356 ~~~~~~g~tpLh~A--a~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G 433 (654)
+..|+||||+| +..|+.+++++|++. +.+++..|..|.||+|.++..+.. ++|++.++ ..+++.+|.+|
T Consensus 118 ---~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~~~---~~ll~~ga--~~~~~~~d~~G 188 (229)
T 2vge_A 118 ---LSDGATAFEKCDPYREGYADCATYLADV-EQSMGLMNSGAVYALWDYSAEFGD---ELSFREGE--SVTVLRRDGPE 188 (229)
T ss_dssp ---SSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGGEEEESSCBCCSSTT---BCCBCTTC--EEEEEESSCTT
T ss_pred ---CCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcccccCCchHHHHHHhhcccc---ccCccccc--cccccccCCCc
Confidence 13578888888 899999999999998 889999999999999976655433 67788876 23488999999
Q ss_pred CcHhHHHhhcCCCCCc
Q 038131 434 NSALHLAATLGDHKPW 449 (654)
Q Consensus 434 ~TpLh~Aa~~g~~~~~ 449 (654)
+||||+|++.|+.+++
T Consensus 189 ~TpL~~A~~~g~~~~v 204 (229)
T 2vge_A 189 ETDWWWAALHGQEGYV 204 (229)
T ss_dssp CSSEEEEEETTEEEEE
T ss_pred ccHHHHHHHcCCccee
Confidence 9999999999996655
No 64
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=2.7e-27 Score=219.86 Aligned_cols=131 Identities=22% Similarity=0.247 Sum_probs=120.8
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcH
Q 038131 19 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTV 98 (654)
Q Consensus 19 ~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~ 98 (654)
....+.|+||.||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~ 83 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN-----AVDHAGMTP 83 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCH
Confidence 456678999999999999999999999988 99999999999999999999999999999999998 899999999
Q ss_pred HHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 99 LHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
||+|+..|+.+++++|++++++ ++.+|.+|.||||+|+..+ +.+++++|+++|++++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~g~~~~ 140 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFG-------HLEIVEVLLKNGADVN 140 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCC
Confidence 9999999999999999999987 9999999999999999999 8899999888776543
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.4e-27 Score=220.00 Aligned_cols=111 Identities=22% Similarity=0.251 Sum_probs=77.1
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHC 101 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~ 101 (654)
...||||.|+..|+.+++++|++.+++ ++.+|..|+||||+|+. |+.+++++|+++|++++ .+|..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-----LKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-----CCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-----CCCCCCCCHHHH
Confidence 455777777777777777777777766 67777777777777777 77777777777777766 667777777777
Q ss_pred HHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCC
Q 038131 102 AISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKP 140 (654)
Q Consensus 102 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~ 140 (654)
|++.|+.+++++|++.+++ ++.+|.+|.||||+|+..|
T Consensus 77 A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEG 114 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcC
Confidence 7777777777777776655 5555555555555555554
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=2.3e-27 Score=219.85 Aligned_cols=158 Identities=17% Similarity=0.092 Sum_probs=145.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHH
Q 038131 56 ENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHL 135 (654)
Q Consensus 56 ~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 135 (654)
.|.||||.||..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVIN-----HTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcC-----CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHH
Confidence 68999999999999999999999999888 8999999999999999999999999999887 99999999999999
Q ss_pred HhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCCCC
Q 038131 136 LATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTKKE 215 (654)
Q Consensus 136 A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~~~ 215 (654)
|+..+ +.+++++|++.|++++..
T Consensus 76 A~~~~-------~~~~v~~Ll~~g~~~~~~-------------------------------------------------- 98 (167)
T 3v31_A 76 ACSKG-------YTDIVKMLLDCGVDVNEY-------------------------------------------------- 98 (167)
T ss_dssp HHHHT-------CHHHHHHHHHHTCCTTCC--------------------------------------------------
T ss_pred HHHcC-------CHHHHHHHHHCCCCCCcC--------------------------------------------------
Confidence 99998 888888888766554321
Q ss_pred CCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhhhh
Q 038131 216 QTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQKHT 295 (654)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 295 (654)
T Consensus 99 -------------------------------------------------------------------------------- 98 (167)
T 3v31_A 99 -------------------------------------------------------------------------------- 98 (167)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcChH
Q 038131 296 WSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNGIT 375 (654)
Q Consensus 296 ~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G~~ 375 (654)
|..|.||||+|+..|+.
T Consensus 99 ---------------------------------------------------------------~~~g~t~L~~A~~~~~~ 115 (167)
T 3v31_A 99 ---------------------------------------------------------------DWNGGTPLLYAVHGNHV 115 (167)
T ss_dssp ---------------------------------------------------------------CTTSCCHHHHHHHTTCH
T ss_pred ---------------------------------------------------------------CCCCCCHHHHHHHcCCH
Confidence 24689999999999999
Q ss_pred HHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCc
Q 038131 376 EIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTI 420 (654)
Q Consensus 376 eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~ 420 (654)
+++++|++. +.+++.+|.+|+||||+|+..|+.+++++|++++.
T Consensus 116 ~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 116 KCVKMLLES-GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 999999996 89999999999999999999999999999999876
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=1.8e-27 Score=223.31 Aligned_cols=129 Identities=18% Similarity=0.181 Sum_probs=106.2
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHH
Q 038131 21 ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLH 100 (654)
Q Consensus 21 ~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh 100 (654)
.++.|+||.||..|+.+++++|++.++..++.+|..|+||||+||..|+.+++++|+++|++++ .+|..|.||||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~ 77 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN-----VMNRGDDTPLH 77 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-----CcCCCCCCHHH
Confidence 4678999999999999999999998776688999999999999999999999999999999888 88899999999
Q ss_pred HHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcc
Q 038131 101 CAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISV 162 (654)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~ 162 (654)
+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.+++++|+++|+++
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~-------~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 78 LAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWG-------QDQVAEDLVANGALV 131 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCS
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcC-------CHHHHHHHHHCCCCc
Confidence 99999999999999998876 7777777777777777766 566666666555443
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.1e-29 Score=247.06 Aligned_cols=129 Identities=18% Similarity=0.165 Sum_probs=85.7
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
+..|.||||.|+..|+.++++.|+++|++ ++. +..|.||||+|+..|+.+++++|++.|++++ .+|..|.|||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~d~~g~t~L 74 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPS-----LPNDEGITAL 74 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC-----CCCTTSCCHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHH
Confidence 35689999999999999999999999988 664 4788999999999999999999999999888 8899999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|+|+..|+.+++++|++++++ ++.+|.+|.||||+|+..| +.+++++|+++|++++
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~-------~~~~v~~Ll~~ga~~~ 130 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCN-------NVQVCKFLVESGAAVF 130 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCcc
Confidence 999999999999999999887 8999999999999999988 8888888888776664
No 69
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.9e-27 Score=217.87 Aligned_cols=144 Identities=15% Similarity=0.134 Sum_probs=136.8
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|. +++.+|..|+||||+|+. |+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 19 ~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 94 (162)
T 1ihb_A 19 EQLTSLLQNNV--NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA 94 (162)
T ss_dssp HHHHHHTTSCC--CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHhCCC--CccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 68999999887 789999999999999999 999999999999988 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .+|..|.||||+|++.|+.+++++|++++++.++.+|..|.||||+|+..+ +.+++++|+++|++
T Consensus 95 ~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~-------~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 95 DVN-----IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYG-------RNEVVSLMQANGAG 162 (162)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTC--
T ss_pred CCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcC-------CHHHHHHHHHhCCC
Confidence 998 899999999999999999999999999999867999999999999999999 99999999999875
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=5.3e-27 Score=214.00 Aligned_cols=126 Identities=21% Similarity=0.172 Sum_probs=114.4
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHH
Q 038131 23 GSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCA 102 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A 102 (654)
+.||||.|+..|+.+++++|++.+++ ++ .|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD-----ARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-----CCCTTCCCHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC-CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CCCCCCCCHHHHH
Confidence 46899999999999999999999987 54 68899999999999999999999999999988 8899999999999
Q ss_pred HHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 103 ISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 103 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
+..|+.+++++|++++++ ++.+|.+|.||||+|+..+ +.+++++|+++|++++
T Consensus 75 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~ga~~~ 127 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHN-------HQEVVELLIKYGADVH 127 (153)
T ss_dssp HHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCcc
Confidence 999999999999999887 9999999999999999998 8888888887776543
No 71
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=1.1e-29 Score=265.21 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=108.2
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHhhCCcc--ccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCC
Q 038131 18 IGDERGSTPLHIAAGLGNVSMCKCIATADPRL--IGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEG 95 (654)
Q Consensus 18 ~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~--~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g 95 (654)
.++.+++||||+||..|+.++|++|++.++.. .+..|..|+||||+||..|+.++|++|+++|+++...+ ..+.+
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~--i~~~~- 163 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM--IQAEN- 163 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHH--HSHHH-
T ss_pred HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc--cCCCC-
Confidence 34556779999999999999999999998731 22456678999999999999999999999998632111 22223
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhccccccc--cccCCCCHHHHHh-cCCCCCccCCchHHHHHHhhcc
Q 038131 96 DTVLHCAISGDYFDLAFQIIHRCEKLVNS--VNEQGVSPLHLLA-TKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 96 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~--~d~~g~TpLh~A~-~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
.||||+|+..|+.+++++|++++++ ++. +|..|.||||+|+ .+| +.+++++|++.|
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G-------~~eiv~~Ll~~g 222 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRG-------HHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTC-------CHHHHHHHTTSH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCC-------CHHHHHHHHhCC
Confidence 9999999999999999999999987 776 8999999999999 999 999999999865
No 72
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=7.1e-27 Score=213.81 Aligned_cols=122 Identities=19% Similarity=0.205 Sum_probs=113.0
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHH
Q 038131 23 GSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCA 102 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A 102 (654)
|.||||.||..|+.++++.|++..+..++.+|..|+||||+ |..|+.+++++|+++|++++ .+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A 75 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPN-----VQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCC-----CcCCCCCCHHHHH
Confidence 57999999999999999999999444589999999999999 99999999999999999998 8999999999999
Q ss_pred HHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhc
Q 038131 103 ISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYH 158 (654)
Q Consensus 103 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~ 158 (654)
+..|+.+++++|++.+++ ++.+|.+|.||||+|+..| +.+++++|++.
T Consensus 76 ~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~ 123 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEG-------HTAVVSFLAAE 123 (156)
T ss_dssp HHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHT-------CHHHHHHHHTT
T ss_pred HHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhC-------hHHHHHHHHhc
Confidence 999999999999999987 9999999999999999998 78888888764
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.3e-26 Score=215.13 Aligned_cols=142 Identities=24% Similarity=0.286 Sum_probs=136.1
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|++|+++|. +++.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 28 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 104 (169)
T 2y1l_E 28 DEVRILMANGA--DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA 104 (169)
T ss_dssp HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 68999999987 7999999999999999999999999999999988 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhcc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
+++ .+|..|.||||+|++.|+.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|++.|
T Consensus 105 ~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~-------~~~~~~~L~~~G 169 (169)
T 2y1l_E 105 DVN-----ANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNG-------NEDLAEILQKLN 169 (169)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHTC-
T ss_pred CCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhC-------CHHHHHHHHHcC
Confidence 998 8999999999999999999999999999998 9999999999999999999 899999998765
No 74
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=2.9e-27 Score=218.68 Aligned_cols=132 Identities=23% Similarity=0.240 Sum_probs=121.8
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcH
Q 038131 19 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTV 98 (654)
Q Consensus 19 ~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~ 98 (654)
.|.+|.||||.|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~ 78 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH-----AKDKGGLVP 78 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-----ccCCCCCCH
Confidence 577899999999999999999999998776688899999999999999999999999999999998 899999999
Q ss_pred HHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 99 LHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..+ +.+++++|+++|++++
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~-------~~~~v~~Ll~~ga~~~ 135 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKG-------KYEICKLLLQHGADPT 135 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCCc
Confidence 9999999999999999999988 9999999999999999999 8999999988776654
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.6e-27 Score=234.80 Aligned_cols=180 Identities=15% Similarity=0.094 Sum_probs=130.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHH
Q 038131 54 NHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPL 133 (654)
Q Consensus 54 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 133 (654)
+..|+||||.|++.|+.++++.|+++|++++ .+..|.||||+|+..|+.+++++|++.+++ ++.+|..|.|||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~------~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L 74 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK------FNPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITAL 74 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc------cCchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHH
Confidence 3569999999999999999999999999996 457899999999999999999999999996 999999999999
Q ss_pred HHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHHHHHHHHHHhcCCCCC
Q 038131 134 HLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRLLKTMFIVLSNRGNTK 213 (654)
Q Consensus 134 h~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~l~~~g~~~ 213 (654)
|+|+..| +.+++++|+++|++++..
T Consensus 75 ~~A~~~g-------~~~~v~~Ll~~ga~~~~~------------------------------------------------ 99 (239)
T 1ycs_B 75 HNAVCAG-------HTEIVKFLVQFGVNVNAA------------------------------------------------ 99 (239)
T ss_dssp HHHHHHT-------CHHHHHHHHHHTCCTTCC------------------------------------------------
T ss_pred HHHHHcC-------CHHHHHHHHHcCCCCCcc------------------------------------------------
Confidence 9999999 899999998877665432
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCcccccCCCCCCCCCCCCcchhhHHHHHHhhhhhHHHHHHhhchHHHHHHHHHhhh
Q 038131 214 KEQTPTDAEDPERSKGIDDSGDQGEESRHNFGAQGHQFFPPNYGTCFEFVKLVMLVPKAMLVILALGSTKIRKIREKKQK 293 (654)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~vk~L~~~~~~~~~~~~~g~~~~~~~~~~~~~ 293 (654)
T Consensus 100 -------------------------------------------------------------------------------- 99 (239)
T 1ycs_B 100 -------------------------------------------------------------------------------- 99 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHccccccccCCCCCCCCCCCCccccCCCCCCCccCCCCchhhhccccCCCccccCCCCcHHHHHHHcC
Q 038131 294 HTWSVQILDELLRRASLYEYDDDGGKPLRRPSSQAEEDETSPYPIVDGGDTDAVLEGKTGSTIPDMAKRETPILIAAKNG 373 (654)
Q Consensus 294 ~~~~~~il~~Ll~~~~~~~~d~~g~tpLh~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tpLh~Aa~~G 373 (654)
|..|+||||+|+..|
T Consensus 100 -----------------------------------------------------------------d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 100 -----------------------------------------------------------------DSDGWTPLHCAASCN 114 (239)
T ss_dssp -----------------------------------------------------------------CTTCCCHHHHHHHTT
T ss_pred -----------------------------------------------------------------CCCCCCHHHHHHHcC
Confidence 246899999999999
Q ss_pred hHHHHHHHHHHCCCccccccCCCC-chhHHH--HHcCChHHHHHHHhcCcccccccccc---------cCCCCcHhHHHh
Q 038131 374 ITEIVEKILESFPVAIHDINSEKK-NIVLLA--VENRQPHVYQLLLKTTIMKDSVFRKV---------DDQGNSALHLAA 441 (654)
Q Consensus 374 ~~eiv~~LL~~~~~~~~~~d~~G~-T~Lh~A--v~~~~~~iv~~Ll~~~~~~~~~~~~~---------D~~G~TpLh~Aa 441 (654)
+.+++++|+++ +.+++..|..|. ||||+| +..|+.+++++|++.++ +++.. |..|.||+|+|.
T Consensus 115 ~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a----~~~~~~~~~~~al~d~~~~~~~eLa~ 189 (239)
T 1ycs_B 115 NVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE----KMGIMNKGVIYALWDYEPQNDDELPM 189 (239)
T ss_dssp CHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHH----HTTTTGGGEEEESSCBCCSSTTBCCB
T ss_pred CHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhh----cccccccceEEEEeccCCCCCCcccc
Confidence 99999999997 889999998877 999999 88899999999999987 44443 778999999999
Q ss_pred hcCC
Q 038131 442 TLGD 445 (654)
Q Consensus 442 ~~g~ 445 (654)
+.|+
T Consensus 190 ~~G~ 193 (239)
T 1ycs_B 190 KEGD 193 (239)
T ss_dssp CSSC
T ss_pred cCCC
Confidence 9887
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=7.8e-27 Score=208.35 Aligned_cols=132 Identities=14% Similarity=0.116 Sum_probs=127.5
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
+++.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+. |+.+++++|+++|++++ .+|..
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-----~~~~~ 76 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN-----CADPA 76 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS-----CCBTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC-----CcCCC
Confidence 6899999999999999999999999999999988 99999999999999999 99999999999999998 89999
Q ss_pred -CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 95 -GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 95 -g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|+++|+|
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~-------~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQG-------HRDIARYLHAATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHT-------CHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcC-------CHHHHHHHHHcCCC
Confidence 99999999999999999999999987 9999999999999999999 89999999998875
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.5e-26 Score=213.74 Aligned_cols=98 Identities=18% Similarity=0.230 Sum_probs=86.2
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhhcC-CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 038131 53 RNHENETPFFLAALHGHKDAFLCLHYLCA-SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVS 131 (654)
Q Consensus 53 ~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T 131 (654)
.|.+|+||||.|++.|+.++++.|++.+. +.+ ..+..|.||||+|+..|+.+++++|++.+++ ++.+|.+|.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCR-----DIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCC-----CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcc-----ccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCC
Confidence 57789999999999999999999998543 444 7888999999999999999999999999987 9999999999
Q ss_pred HHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 132 PLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 132 pLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|||+|+..+ +.+++++|+++|++++
T Consensus 78 ~L~~A~~~~-------~~~~v~~Ll~~g~~~~ 102 (165)
T 3twr_A 78 PLHNACSYG-------HYEVAELLVKHGAVVN 102 (165)
T ss_dssp HHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcC-------cHHHHHHHHhCCCCCC
Confidence 999999999 8899998887765543
No 78
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=7.2e-26 Score=206.49 Aligned_cols=137 Identities=22% Similarity=0.252 Sum_probs=130.0
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|. +++ .|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 16 ~~v~~Ll~~g~--~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 91 (153)
T 1awc_B 16 DEVRILMANGA--PFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGHANIVEVLLKHGA 91 (153)
T ss_dssp HHHHHHHHHTC--CCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCC--CCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC
Confidence 68999999987 454 688999999999999999999999999998 89999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHH
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGI 155 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~L 155 (654)
+++ .+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..| +.+++++|
T Consensus 92 ~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~-------~~~i~~~L 152 (153)
T 1awc_B 92 DVN-----AKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDNG-------NEDLAEIL 152 (153)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHH
T ss_pred CCC-----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcC-------CHHHHHHh
Confidence 998 8999999999999999999999999999987 9999999999999999999 89999886
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=3.5e-26 Score=214.44 Aligned_cols=151 Identities=23% Similarity=0.260 Sum_probs=142.8
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|++.+.. +++.+|..|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 19 ~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 96 (179)
T 3f6q_A 19 VAVRLWLDNTEN-DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQYKA 96 (179)
T ss_dssp HHHHHHHHCTTS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCcc-cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 578999987543 6899999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+++ .+|..|.||||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..+ +.++++.|++.|++
T Consensus 97 ~~~-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~-------~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 97 DIN-----AVNEHGNVPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPL-------RELLRERAEKMGQN 163 (179)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHH-------HHHHHHHHHHTTCC
T ss_pred CCC-----ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHH-------HHHHHHHHHHhhcC
Confidence 998 8999999999999999999999999999998 9999999999999999988 89999999999999
Q ss_pred ccccch
Q 038131 162 VDKLQE 167 (654)
Q Consensus 162 ~~~~~~ 167 (654)
++..+.
T Consensus 164 ~~~~~~ 169 (179)
T 3f6q_A 164 LNRIPY 169 (179)
T ss_dssp CSCBCC
T ss_pred cccCCc
Confidence 987664
No 80
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=1.6e-25 Score=204.70 Aligned_cols=140 Identities=16% Similarity=0.188 Sum_probs=131.8
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|++. ...+++.+|..|+||||+ |..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 16 ~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (156)
T 1bd8_A 16 QEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGA 92 (156)
T ss_dssp HHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 578999988 334699999999999999 999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYH 158 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~ 158 (654)
+++ .+|..|.||||+|++.|+.+++++|++. ++ ++.+|.+|.||||+|+..| +.+++++|+++
T Consensus 93 ~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~-------~~~~v~~Ll~~ 155 (156)
T 1bd8_A 93 DVN-----VPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRG-------AQDLVDILQGH 155 (156)
T ss_dssp CSC-----CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSC-------CHHHHHHHHTT
T ss_pred CCC-----CcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcC-------cHHHHHHHHhh
Confidence 998 8999999999999999999999999999 65 9999999999999999999 99999999864
No 81
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=3.6e-27 Score=246.25 Aligned_cols=142 Identities=13% Similarity=0.068 Sum_probs=119.6
Q ss_pred hhHHHHHhccccc-ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCc----cccCCCCCCChHHHHHHHcCCHHHHHHH
Q 038131 2 DLVGIIQEKQQLK-VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPR----LIGERNHENETPFFLAALHGHKDAFLCL 76 (654)
Q Consensus 2 ~iv~~Ll~~~~~~-~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~----~~~~~d~~G~TpLh~Aa~~g~~~iv~~L 76 (654)
++|++|+++|++. ..+..|..|+||||+||..|+.++|++|++.|++ .++.++ .||||+||..|+.++|++|
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCCHHHHHHH
Confidence 6899999988732 2234566789999999999999999999999974 233333 9999999999999999999
Q ss_pred HhhcCCCCCCCccc--cCCCCCcHHHHHH-HcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHH
Q 038131 77 HYLCASVDDGYTYS--RRNEGDTVLHCAI-SGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCT 153 (654)
Q Consensus 77 l~~g~~~~~~~~~~--~~~~g~T~Lh~A~-~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~ 153 (654)
+++|++++ . .|..|.||||+|+ ..|+.+++++|++.++. |.||||+|+.+| +.++++
T Consensus 183 l~~ga~~~-----~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g-------~~evv~ 242 (376)
T 2aja_A 183 CELAPTEA-----TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM--------LAYAEIHEFEYG-------EKYVNP 242 (376)
T ss_dssp HHSCGGGH-----HHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------HHHHHHCTTTTT-------TTTHHH
T ss_pred HHcCCccc-----hhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------cchHHHHHHHCC-------CHHHHH
Confidence 99999876 5 7888999999999 99999999999996642 889999999999 899999
Q ss_pred HHhhccCcccccc
Q 038131 154 GIIYHCISVDKLQ 166 (654)
Q Consensus 154 ~Ll~~~~~~~~~~ 166 (654)
+|++.|++++..+
T Consensus 243 lL~~~ga~~~~~~ 255 (376)
T 2aja_A 243 FIARHVNRLKEMH 255 (376)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHhcCccccccc
Confidence 9999998776443
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=1.9e-25 Score=204.46 Aligned_cols=138 Identities=14% Similarity=0.080 Sum_probs=120.5
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
..+..+..|.||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+ .|+.+++++|+++|++++ .+|..
T Consensus 4 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~-----~~d~~ 76 (156)
T 1bi7_B 4 AAGSSMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPN-----CADPA 76 (156)
T ss_dssp ------CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC-----CCCTT
T ss_pred CccCCCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC-----CcCCC
Confidence 3566788999999999999999999999999988 9999999999999986 999999999999999998 89999
Q ss_pred CCc-HHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccch
Q 038131 95 GDT-VLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQE 167 (654)
Q Consensus 95 g~T-~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 167 (654)
|.| |||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|+++|++++..+.
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~-------~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELG-------HRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHT-------CHHHHHHHSSCC--------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhC-------HHHHHHHHHHcCCCCCccCc
Confidence 999 99999999999999999999998 9999999999999999999 89999999999999987764
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=6.4e-25 Score=195.88 Aligned_cols=127 Identities=19% Similarity=0.176 Sum_probs=119.8
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcH
Q 038131 19 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTV 98 (654)
Q Consensus 19 ~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~ 98 (654)
....|.||||+||..|+.+++++|++.+++ ++.+|..|+||||+||..|+.+++++|+++|++++ .+|..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN-----AVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCH
Confidence 456789999999999999999999999988 99999999999999999999999999999999998 899999999
Q ss_pred HHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhcc
Q 038131 99 LHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHC 159 (654)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~ 159 (654)
||+|+..|+.+++++|++++++ ++.+|.+|.||||+|+..+ +.+++++|++.|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~-------~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNG-------NEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCC-------CHHHHHHHHHcC
Confidence 9999999999999999999987 9999999999999999999 899999998865
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.7e-24 Score=189.93 Aligned_cols=126 Identities=28% Similarity=0.428 Sum_probs=121.5
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHC 101 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~ 101 (654)
+|+||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-----AKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc-----ccCCCCCcHHHH
Confidence 589999999999999999999999988 89999999999999999999999999999999998 899999999999
Q ss_pred HHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 102 AISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 102 A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
|+..|+.+++++|++++++ ++.+|..|.||||+|+..+ +.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~-------~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNG-------HLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHHTCC
T ss_pred HHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcC-------cHHHHHHHHHcCCC
Confidence 9999999999999999987 9999999999999999999 89999999999875
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=4.4e-25 Score=207.79 Aligned_cols=109 Identities=12% Similarity=0.076 Sum_probs=98.2
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCccccCCC-CCCChHHHHHHHcCCH----HHHHHHHhhcCCCCCCCccccCCCCCc
Q 038131 23 GSTPLHIAAGLGNVSMCKCIATADPRLIGERN-HENETPFFLAALHGHK----DAFLCLHYLCASVDDGYTYSRRNEGDT 97 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~TpLh~Aa~~g~~----~iv~~Ll~~g~~~~~~~~~~~~~~g~T 97 (654)
+.++||.||..|+.+.++.+++.+.+ .++ ..|+||||+|+..|+. +++++|+++|++++ .+|..|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn-----~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIK-----SRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSS-----CCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCC-----CCCCCCCc
Confidence 56899999999999999999988743 455 7899999999999985 59999999999999 89999999
Q ss_pred HHHHHHHcCC------HHHHHHHHHhccccccccccCCC-CHHHHHhcCC
Q 038131 98 VLHCAISGDY------FDLAFQIIHRCEKLVNSVNEQGV-SPLHLLATKP 140 (654)
Q Consensus 98 ~Lh~A~~~g~------~~~v~~Ll~~~~~~~~~~d~~g~-TpLh~A~~~~ 140 (654)
|||+|+..|+ .+++++|+++|++ ++.+|..|. ||||+|+..+
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcC
Confidence 9999999987 6889999999998 999999999 9999999854
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=7.5e-25 Score=195.68 Aligned_cols=127 Identities=23% Similarity=0.243 Sum_probs=117.7
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCc
Q 038131 18 IGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDT 97 (654)
Q Consensus 18 ~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T 97 (654)
.+|.+|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN-----TTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc-----CcCCCCCC
Confidence 6889999999999999999999999999988 99999999999999999999999999999999998 89999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhc
Q 038131 98 VLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYH 158 (654)
Q Consensus 98 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~ 158 (654)
|||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+..+ ..+++++|.+.
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~-------~~~~l~~l~~~ 131 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDES-------MKSLLLLPEKN 131 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHH-------HHHHHSCC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhcc-------HHHHHhhcccc
Confidence 99999999999999999999987 9999999999999999877 67776666543
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.4e-24 Score=204.45 Aligned_cols=145 Identities=12% Similarity=-0.038 Sum_probs=125.9
Q ss_pred hHHHHHhcccccccccCC-CCCChHHHHHHhcCCH----HHHHHHHhhCCccccCCCCCCChHHHHHHHcCC------HH
Q 038131 3 LVGIIQEKQQLKVLKIGD-ERGSTPLHIAAGLGNV----SMCKCIATADPRLIGERNHENETPFFLAALHGH------KD 71 (654)
Q Consensus 3 iv~~Ll~~~~~~~l~~~d-~~g~T~Lh~Aa~~G~~----~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~------~~ 71 (654)
.++.+++.+ .+.++ ..|+||||+|+..|+. +++++|+++|++ ++.+|.+|+||||+|+..|+ .+
T Consensus 21 ~~~~l~~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh~a~~~~~~~~~~~~~ 95 (186)
T 3t8k_A 21 DFLELFEKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFFPLFQGGGNDITGTTE 95 (186)
T ss_dssp HHHHHHHHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHhcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCcchhhHHH
Confidence 345555443 44555 7799999999999985 599999999999 99999999999999999997 57
Q ss_pred HHHHHHhhcCCCCCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHH-hccccccccccCCCCHHHHHhcCCCCCc
Q 038131 72 AFLCLHYLCASVDDGYTYSRRNEGD-TVLHCAISGD-----YFDLAFQIIH-RCEKLVNSVNEQGVSPLHLLATKPNAFR 144 (654)
Q Consensus 72 iv~~Ll~~g~~~~~~~~~~~~~~g~-T~Lh~A~~~g-----~~~~v~~Ll~-~~~~~~~~~d~~g~TpLh~A~~~~~~~~ 144 (654)
++++|+++|++++ .+|..|. ||||+|+..+ +.+++++|++ .|++ ++.+|..|.||||+|++.+
T Consensus 96 iv~~Ll~~Gadin-----~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~---- 165 (186)
T 3t8k_A 96 LCKIFLEKGADIT-----ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQ---- 165 (186)
T ss_dssp HHHHHHHTTCCSS-----SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTT----
T ss_pred HHHHHHHCCCCCC-----ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcC----
Confidence 8999999999999 8999999 9999999954 3579999999 8887 9999999999999999999
Q ss_pred cCCchHHHHHHhhccCccccc
Q 038131 145 SGSHLGLCTGIIYHCISVDKL 165 (654)
Q Consensus 145 ~~~~~~~v~~Ll~~~~~~~~~ 165 (654)
+.+++++|.++..+.+..
T Consensus 166 ---~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 166 ---KPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp ---CHHHHHHHHHHHHHHTCC
T ss_pred ---CHHHHHHHHHHHHHHhcc
Confidence 899999998876555443
No 88
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=8.8e-24 Score=184.89 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=106.1
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHH
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVL 99 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~L 99 (654)
+..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+||..|+.+++++|+++|++++ .+|..|.|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN-----APDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT-----CCCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCHH
Confidence 56789999999999999999999999988 99999999999999999999999999999999998 8999999999
Q ss_pred HHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcC
Q 038131 100 HCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATK 139 (654)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 139 (654)
|+|+..|+.+++++|++++++ ++.+|.+|.||||+|...
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCCH
T ss_pred HHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCCH
Confidence 999999999999999999987 999999999999999643
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=1e-23 Score=192.87 Aligned_cols=76 Identities=17% Similarity=0.055 Sum_probs=51.4
Q ss_pred CCCc-HHHHHHHcChHHHHHHHHHHCCCccccccCCCCchhHHHHHcCChHHHHHHHhcCcccccccccccCCCCcHhHH
Q 038131 361 KRET-PILIAAKNGITEIVEKILESFPVAIHDINSEKKNIVLLAVENRQPHVYQLLLKTTIMKDSVFRKVDDQGNSALHL 439 (654)
Q Consensus 361 ~g~t-pLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~Lh~Av~~~~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLh~ 439 (654)
.|+| |||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+.+|+.+++++|+++++ +++.+|..|+||.+-
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga----~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG----GTRGSNHARIDAAEG 150 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC----CCCccCcCcCccccc
Confidence 4677 88888888889999999987 78888899999999999999999999999999988 888999999998875
Q ss_pred Hh
Q 038131 440 AA 441 (654)
Q Consensus 440 Aa 441 (654)
+.
T Consensus 151 ~~ 152 (156)
T 1bi7_B 151 PS 152 (156)
T ss_dssp --
T ss_pred CC
Confidence 43
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=8.7e-24 Score=208.58 Aligned_cols=112 Identities=19% Similarity=0.181 Sum_probs=101.6
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccC-CCCCcH
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRR-NEGDTV 98 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~-~~g~T~ 98 (654)
+.+|+||||+||..|+.++++.|++ +++ ++.+|..|+||||+||..|+.++|++|+++|++++ .++ ..|.||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-----~~~~~~g~t~ 114 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-----HRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCSSSCCCH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-----cCCCCCCCCH
Confidence 4578999999999999999999999 776 89999999999999999999999999999999988 677 789999
Q ss_pred HHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcC
Q 038131 99 LHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATK 139 (654)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 139 (654)
||+|+..|+.+++++|++++++ ++.+|..|.||||+|+..
T Consensus 115 L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREI 154 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHH
Confidence 9999999999999999999887 999999999999999753
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=8.6e-24 Score=198.89 Aligned_cols=114 Identities=18% Similarity=0.162 Sum_probs=107.5
Q ss_pred CCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccC-CCCCc
Q 038131 19 GDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRR-NEGDT 97 (654)
Q Consensus 19 ~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~-~~g~T 97 (654)
.|.+|+||||+||..|+.++++.|++ +.+ ++.+|..|+||||+|+..|+.+++++|+++|++++ .++ ..|.|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~~~~~g~t 112 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD-----HRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCSSSSCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCC
Confidence 35689999999999999999999999 776 99999999999999999999999999999999998 777 89999
Q ss_pred HHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCC
Q 038131 98 VLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKP 140 (654)
Q Consensus 98 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~ 140 (654)
|||+|+..|+.+++++|++++++ ++.+|.+|.||||+|++.+
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhc
Confidence 99999999999999999999987 9999999999999998754
No 92
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.5e-23 Score=185.50 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=94.4
Q ss_pred cccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccC
Q 038131 49 LIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQ 128 (654)
Q Consensus 49 ~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~ 128 (654)
.++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.||||+|+. |+.+++++|++++++ ++.+|..
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-----~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~ 76 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPN-----ALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPA 76 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcC-----CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCC
Confidence 388999999999999999999999999999999998 899999999999999 999999999999998 9999999
Q ss_pred -CCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 129 -GVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 129 -g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
|.||||+|+..+ +.+++++|+++|++++
T Consensus 77 ~g~t~L~~A~~~~-------~~~~v~~Ll~~ga~~~ 105 (136)
T 1d9s_A 77 TLTRPVHDAAREG-------FLDTLVVLHRAGARLD 105 (136)
T ss_dssp TTBCHHHHHHHHT-------CHHHHHHHHHTCCCCC
T ss_pred CCCCHHHHHHHcC-------CHHHHHHHHHcCCCCC
Confidence 999999999999 8899999888776553
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.3e-23 Score=204.28 Aligned_cols=138 Identities=19% Similarity=0.174 Sum_probs=118.4
Q ss_pred cccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhh-cCCCCCCCccccCCC
Q 038131 16 LKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYL-CASVDDGYTYSRRNE 94 (654)
Q Consensus 16 l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~ 94 (654)
++..|.+|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+||..|+.++|++|+++ |++++ .+|..
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-----~~d~~ 139 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN-----QQNKL 139 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC-----CCCTT
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc-----ccCCC
Confidence 445677889999999999999999999999988 999999999999999999999999999999 99988 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcccccch
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQE 167 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 167 (654)
|.||||+|+..|+.+++++|++++++ ++.+|.+|.||||+|+..+ +.++++.|+..++..+..+.
T Consensus 140 g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~-------~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 140 GDTALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAA-------CASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHH-------HHHHHC--------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchh-------HHHHHHHHhccchhhhccch
Confidence 99999999999999999999999998 9999999999999999988 99999999999888766553
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=8.1e-24 Score=199.06 Aligned_cols=96 Identities=18% Similarity=0.180 Sum_probs=88.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccc-cCCCCH
Q 038131 54 NHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVN-EQGVSP 132 (654)
Q Consensus 54 d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~Tp 132 (654)
|.+|+||||+||..|+.+++++|++ |++++ .+|..|.||||+|+..|+.+++++|++++++ ++.+| .+|.||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVD-----AVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTT-----CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCH
Confidence 5689999999999999999999999 88888 8999999999999999999999999999988 88888 899999
Q ss_pred HHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 133 LHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 133 Lh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
||+|+..| +.+++++|+++|++++
T Consensus 114 L~~A~~~~-------~~~~v~~Ll~~ga~~~ 137 (183)
T 3deo_A 114 LHMAAGYV-------RPEVVEALVELGADIE 137 (183)
T ss_dssp HHHHHHTT-------CHHHHHHHHHHTCCTT
T ss_pred HHHHHhcC-------cHHHHHHHHHcCCCCc
Confidence 99999999 8899999988776654
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=2.9e-24 Score=211.99 Aligned_cols=125 Identities=16% Similarity=0.122 Sum_probs=107.4
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHH
Q 038131 21 ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLH 100 (654)
Q Consensus 21 ~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh 100 (654)
..+.+++.+++..|+.+.+..+...+.+ .+.+|+||||+||+.|+.+++++|++ |++++ .+|..|.||||
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~----~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~-----~~d~~g~t~L~ 82 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAAD----VVSEYETPWWTAARKADEQALSQLLE-DRDVD-----AVDENGRTALL 82 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHH----HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTT-----CBCTTSCBHHH
T ss_pred CCCccHHHHHHHcCCCcccccccccccc----cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCC-----CcCCCCCCHHH
Confidence 3566777777777777766555444433 35689999999999999999999999 88888 89999999999
Q ss_pred HHHHcCCHHHHHHHHHhccccccccc-cCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccc
Q 038131 101 CAISGDYFDLAFQIIHRCEKLVNSVN-EQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVD 163 (654)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~ 163 (654)
+|+..|+.+++++|++++++ ++.+| ..|.||||+|+..| +.+++++|+++|++++
T Consensus 83 ~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 83 FVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYV-------RPEVVEALVELGADIE 138 (244)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHHTT-------CHHHHHHHHHTTCCTT
T ss_pred HHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHHcC-------CHHHHHHHHHCCCCCC
Confidence 99999999999999999998 88888 88999999999999 8999999988776654
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.6e-21 Score=173.74 Aligned_cols=109 Identities=25% Similarity=0.285 Sum_probs=104.2
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|+++|. +++.+|..|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 28 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 104 (136)
T 2jab_A 28 DEVRILMANGA--DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA 104 (136)
T ss_dssp HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 68999999987 7999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRC 118 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~ 118 (654)
+++ .+|..|.||||+|++.|+.+++++|++.|
T Consensus 105 ~~~-----~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 105 DVN-----AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCc-----CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 998 89999999999999999999999999864
No 97
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.7e-21 Score=161.17 Aligned_cols=93 Identities=27% Similarity=0.417 Sum_probs=88.3
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHH
Q 038131 22 RGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHC 101 (654)
Q Consensus 22 ~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~ 101 (654)
+|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-----AKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCHHHH
Confidence 589999999999999999999999998 99999999999999999999999999999999998 899999999999
Q ss_pred HHHcCCHHHHHHHHHhccc
Q 038131 102 AISGDYFDLAFQIIHRCEK 120 (654)
Q Consensus 102 A~~~g~~~~v~~Ll~~~~~ 120 (654)
|++.|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999998763
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=1.8e-21 Score=197.77 Aligned_cols=124 Identities=17% Similarity=0.089 Sum_probs=110.3
Q ss_pred hhHHHHHhccccccccc------CCCCCChHHHHHHhc---CCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHH
Q 038131 2 DLVGIIQEKQQLKVLKI------GDERGSTPLHIAAGL---GNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDA 72 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~------~d~~g~T~Lh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~i 72 (654)
+.|+.|++.|. +++. +|..|+||||+||.. |+.+++++|++.|++ ++.+|.+|+||||+|+..|+.++
T Consensus 165 ~~v~~ll~~g~--d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~ 241 (301)
T 2b0o_E 165 LSVLEAFANGQ--DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDC 241 (301)
T ss_dssp HHHHHHHHTTC--CTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhcCC--cccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHH
Confidence 45778888887 6777 689999999999997 899999999999998 99999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCC
Q 038131 73 FLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKP 140 (654)
Q Consensus 73 v~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~ 140 (654)
+++|+++|++++ .+|..|.||||+|+..|+.+++++|++.+++ .|.||||+|++.|
T Consensus 242 v~~Ll~~gad~~-----~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 242 LKLLLKGRALVG-----TVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHTTCCCS-----CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC------
T ss_pred HHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcC
Confidence 999999999998 8999999999999999999999999999875 5899999999987
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=6.2e-21 Score=193.84 Aligned_cols=128 Identities=16% Similarity=0.072 Sum_probs=119.0
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccC------CCCCCChHHHHHHHc---CCHHHHHHHHhhcCCCCCCCccc
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGE------RNHENETPFFLAALH---GHKDAFLCLHYLCASVDDGYTYS 90 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~------~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~~~~~ 90 (654)
...+.++||.|+..|+.+.++.|++.+++ ++. +|..|+||||+||.. |+.+++++|+++|++++ .
T Consensus 148 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-----~ 221 (301)
T 2b0o_E 148 CTPEPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-----A 221 (301)
T ss_dssp CC-CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT-----C
T ss_pred cCchHHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC-----C
Confidence 33456789999999999999999999988 776 689999999999997 89999999999999998 8
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 91 RRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 91 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
+|..|.||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+|+..+ +.+++++|++.+++
T Consensus 222 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~-------~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 222 KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKH-------HKECEELLEQAQAG 284 (301)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHT-------CHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcC-------CHHHHHHHHHhcCC
Confidence 999999999999999999999999999998 9999999999999999999 89999999998764
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.4e-20 Score=164.76 Aligned_cols=111 Identities=25% Similarity=0.399 Sum_probs=106.3
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++++.|++++. +++.+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 16 ~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~ 92 (126)
T 1n0r_A 16 EVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (126)
T ss_dssp HHHHHHHHHTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC--CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 68999999987 7899999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccc
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEK 120 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~ 120 (654)
+++ .+|..|.||||+|+..|+.+++++|+++|++
T Consensus 93 ~~~-----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 93 DVN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCc-----ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 998 8999999999999999999999999999874
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=2.5e-21 Score=166.94 Aligned_cols=109 Identities=26% Similarity=0.328 Sum_probs=102.8
Q ss_pred cCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCc
Q 038131 18 IGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDT 97 (654)
Q Consensus 18 ~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T 97 (654)
.+|.+|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|++++ .+|..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-----ARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-----CCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-----ccCCCCCC
Confidence 5789999999999999999999999999998 99999999999999999999999999999999998 89999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhccccccccccCCCCHH
Q 038131 98 VLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPL 133 (654)
Q Consensus 98 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpL 133 (654)
|||+|+..|+.+++++|++++++ ++.++..|.||-
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~ga~-~n~~~~~~~~~~ 112 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKGAD-VNARSWGSSHHH 112 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTSSS-HHHHSCCCC---
T ss_pred HHHHHHHCCCHHHHHHHHHcCCC-CCcCCccccccc
Confidence 99999999999999999999998 999999999874
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=1.7e-20 Score=204.71 Aligned_cols=132 Identities=16% Similarity=0.069 Sum_probs=119.7
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhhCCccccCC------CCCCChHHHHHHH---cCCHHHHHHHHhhcCCCCCCCccc
Q 038131 20 DERGSTPLHIAAGLGNVSMCKCIATADPRLIGER------NHENETPFFLAAL---HGHKDAFLCLHYLCASVDDGYTYS 90 (654)
Q Consensus 20 d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~------d~~G~TpLh~Aa~---~g~~~iv~~Ll~~g~~~~~~~~~~ 90 (654)
.....+.||.|+..|+.++|+.|++.|++ ++.+ |..|+||||+||+ .|+.++|++|+++|++++ .
T Consensus 129 ~~~~~~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-----~ 202 (497)
T 3lvq_E 129 CTPEPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-----A 202 (497)
T ss_dssp CC-CHHHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT-----C
T ss_pred ccccHHHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC-----c
Confidence 33445889999999999999999999988 8877 8899999999977 999999999999999999 8
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCccccc
Q 038131 91 RRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKL 165 (654)
Q Consensus 91 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~ 165 (654)
+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..| +.+++++|+++|++++..
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~-------~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKH-------HKECEELLEQAQAGTFAF 269 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTT-------CHHHHHHHHHTCC-----
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcC-------CHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999998 9999999999999999999 999999999999988764
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.9e-20 Score=186.69 Aligned_cols=127 Identities=16% Similarity=0.094 Sum_probs=118.7
Q ss_pred CChHHHHHHhcCCHHHHHHHHhhCCcc-----ccCCCCCCChHHHHHHHc---CCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 23 GSTPLHIAAGLGNVSMCKCIATADPRL-----IGERNHENETPFFLAALH---GHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 23 g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~-----~~~~d~~G~TpLh~Aa~~---g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
..++||.|+..|+.+.++.+++.|.+. ++..|..|+||||+||.. |+.+++++|+++|++++ .+|..
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-----~~d~~ 204 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-----KQTGK 204 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-----CCCTT
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-----ccCCC
Confidence 457999999999999999999999873 444588999999999999 89999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCcc
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCISV 162 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~ 162 (654)
|.||||+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..| +.+++++|+++|++.
T Consensus 205 g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~-------~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 205 GSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLK-------HEHCEELLTQALSGR 264 (278)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcC-------CHHHHHHHHHcCCCC
Confidence 99999999999999999999999998 9999999999999999999 999999999998754
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=2.2e-20 Score=194.16 Aligned_cols=130 Identities=18% Similarity=0.168 Sum_probs=120.2
Q ss_pred cCCCCCChHHHHHHhc-CCHHHHHHHHhhCCccccCCC--CCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 18 IGDERGSTPLHIAAGL-GNVSMCKCIATADPRLIGERN--HENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 18 ~~d~~g~T~Lh~Aa~~-G~~~~v~~Ll~~~~~~~~~~d--~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
..+..+.|+||.|+.. |+.++++.|++.|++ ++.+| ..|.||||+||..|+.++|++|+++|++++ .+|..
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn-----~~d~~ 267 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVN-----QADSA 267 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTT
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-----CCCCC
Confidence 3445577999999999 999999999999998 89888 899999999999999999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcCCCCCccCCchHHHHHHhhccCc
Q 038131 95 GDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
|.||||+|+..|+.+++++|++++++ ++.+|.+|.||||+|+..+ +.+++++|+..+..
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g-------~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETA-------NADIVTLLRLAKMR 326 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTT-------CHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCC-------CHHHHHHHHHcCCC
Confidence 99999999999999999999999998 9999999999999999999 99999999987643
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=3.1e-20 Score=153.44 Aligned_cols=93 Identities=27% Similarity=0.377 Sum_probs=88.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHH
Q 038131 56 ENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHL 135 (654)
Q Consensus 56 ~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~ 135 (654)
+|+||||+||..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|.+|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n-----~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVN-----AKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCc-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHH
Confidence 58999999999999999999999999998 8999999999999999999999999999998 99999999999999
Q ss_pred HhcCCCCCccCCchHHHHHHhhccCc
Q 038131 136 LATKPNAFRSGSHLGLCTGIIYHCIS 161 (654)
Q Consensus 136 A~~~~~~~~~~~~~~~v~~Ll~~~~~ 161 (654)
|+..+ +.+++++|++.|++
T Consensus 75 A~~~~-------~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNG-------HLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTT-------CHHHHHHHHHTTCC
T ss_pred HHHcC-------CHHHHHHHHHcCCC
Confidence 99999 99999999998864
No 106
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=6.1e-20 Score=163.62 Aligned_cols=120 Identities=21% Similarity=0.193 Sum_probs=110.1
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 038131 52 ERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVS 131 (654)
Q Consensus 52 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T 131 (654)
.+|.+|+||||+||..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPN-----VKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCC
Confidence 689999999999999999999999999999998 8999999999999999999999999999987 9999999999
Q ss_pred HHHHHhcCCCCCccCCchHHHHHHhhccCcccccchhhhhhhhhhhhccccCCCCchHHHHhhHHHH
Q 038131 132 PLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQEETSYDQYQLETSKKQTNYPENYETCLNFIRL 198 (654)
Q Consensus 132 pLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~ 198 (654)
|||+|+..+ +.+++++|+++|++++..+ ..|.+|.+++...+...+
T Consensus 79 ~L~~A~~~~-------~~~~v~~Ll~~ga~~~~~~--------------~~g~tpl~~A~~~~~~~~ 124 (137)
T 3c5r_A 79 PLHDAAKNG-------HVDIVKLLLSYGASRNAVN--------------IFGLRPVDYTDDESMKSL 124 (137)
T ss_dssp HHHHHHHTT-------CHHHHHHHHHTTCCTTCCC--------------TTSCCGGGGCCCHHHHHH
T ss_pred HHHHHHHcC-------CHHHHHHHHHcCCCCCCCC--------------CCCCCHHHHHhhccHHHH
Confidence 999999999 8999999999999988766 457789888876655443
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=7e-20 Score=183.93 Aligned_cols=122 Identities=14% Similarity=0.073 Sum_probs=108.1
Q ss_pred hHHHHHhcccccc----cccCCCCCChHHHHHHhc---CCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHH
Q 038131 3 LVGIIQEKQQLKV----LKIGDERGSTPLHIAAGL---GNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLC 75 (654)
Q Consensus 3 iv~~Ll~~~~~~~----l~~~d~~g~T~Lh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~ 75 (654)
.++.+++.|.... ++..|..|+||||+||.. |+.+++++|++.|++ ++.+|.+|+||||+||..|+.++|++
T Consensus 145 ~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~~g~~~~v~~ 223 (278)
T 1dcq_A 145 GLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCLTDNAECLKL 223 (278)
T ss_dssp HHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 4667777776321 566689999999999999 999999999999998 99999999999999999999999999
Q ss_pred HHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcC
Q 038131 76 LHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATK 139 (654)
Q Consensus 76 Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 139 (654)
|+++|++++ .+|.+|.||||+|+..|+.+++++|++++++ .+++|.++..
T Consensus 224 Ll~~gad~~-----~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---------~~~~~~~v~~ 273 (278)
T 1dcq_A 224 LLRGKASIE-----IANESGETPLDIAKRLKHEHCEELLTQALSG---------RFNSHVHVEY 273 (278)
T ss_dssp HHHTTCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT---------CCCSSCCCCC
T ss_pred HHHcCCCCC-----CccCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------CCCcceeeec
Confidence 999999998 8999999999999999999999999999874 4566655543
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.80 E-value=5.3e-20 Score=160.68 Aligned_cols=99 Identities=21% Similarity=0.215 Sum_probs=92.3
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcC
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCA 81 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~ 81 (654)
++|+.|++.+. +++.+|..|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 21 ~~v~~ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 97 (123)
T 3aaa_C 21 DEVKDYVAKGE--DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 97 (123)
T ss_dssp HHHHHHHHTTC--CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCC--CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 68999999987 7999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCcHHHHHHHcCCH
Q 038131 82 SVDDGYTYSRRNEGDTVLHCAISGDYF 108 (654)
Q Consensus 82 ~~~~~~~~~~~~~g~T~Lh~A~~~g~~ 108 (654)
+++ .+|..|.||||+|+..+..
T Consensus 98 ~~~-----~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 98 DKT-----VKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp CTT-----CCCTTSCCHHHHCCCHHHH
T ss_pred CCC-----CcCCCCCCHHHHhCCHHHH
Confidence 998 8999999999999544333
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.80 E-value=2.5e-19 Score=186.17 Aligned_cols=131 Identities=13% Similarity=0.142 Sum_probs=105.0
Q ss_pred hhHHHHHhcccccccccCC--CCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhh
Q 038131 2 DLVGIIQEKQQLKVLKIGD--ERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYL 79 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d--~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~ 79 (654)
++|+.|+++|+ ++|..| ..|+||||+||..|+.++|++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++
T Consensus 214 ~~v~~LL~~Ga--dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~ 290 (368)
T 3jue_A 214 PTMADALAHGA--DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHHATILGHTGLACLFLKR 290 (368)
T ss_dssp HHHHHHHHTTC--CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHcCC--CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 57899999998 788888 8999999999999999999999999998 999999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhcccc--ccccccCCCCHHHHHhcCC
Q 038131 80 CASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKL--VNSVNEQGVSPLHLLATKP 140 (654)
Q Consensus 80 g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~g~TpLh~A~~~~ 140 (654)
|++++ .+|..|.||||+|+..|+.+++++|++.+... ....+..+.|+++++....
T Consensus 291 Gad~~-----~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 291 GADLG-----ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp TCCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred cCCCC-----CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 99998 89999999999999999999999999887542 3355677889999887654
No 110
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=5.8e-20 Score=178.34 Aligned_cols=119 Identities=18% Similarity=0.108 Sum_probs=99.2
Q ss_pred hhHHHHHhcccccccccCCCCCChHHHHHHhcCCHHHHHHHHhh-CCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhc
Q 038131 2 DLVGIIQEKQQLKVLKIGDERGSTPLHIAAGLGNVSMCKCIATA-DPRLIGERNHENETPFFLAALHGHKDAFLCLHYLC 80 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g 80 (654)
++|+.|++.|+ +++.+|..|+||||+||..|+.++|++|++. +++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 87 ~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 163 (222)
T 3ehr_A 87 SWLRECLDNRV--GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALHAAAWKGYADIVQLLLAKG 163 (222)
T ss_dssp HHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHhCCC--CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 68999999987 7999999999999999999999999999999 766 9999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCC
Q 038131 81 ASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQG 129 (654)
Q Consensus 81 ~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g 129 (654)
++++ .+|..|.||||+|+..|+.++++.|++.++. ...+|.+|
T Consensus 164 a~~~-----~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~-~~~~~~~~ 206 (222)
T 3ehr_A 164 ARTD-----LRNIEKKLAFDMATNAACASLLKKKQGTDAV-RTLSNAED 206 (222)
T ss_dssp CCSC-----CCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCc-----cccCCCCCHHHHhcchhHHHHHHHHhccchh-hhccchhh
Confidence 9998 8999999999999999999999999999886 55555443
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=2.7e-19 Score=195.24 Aligned_cols=123 Identities=17% Similarity=0.088 Sum_probs=104.7
Q ss_pred hhHHHHHhcccccccccC------CCCCChHHHHHHh---cCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHH
Q 038131 2 DLVGIIQEKQQLKVLKIG------DERGSTPLHIAAG---LGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDA 72 (654)
Q Consensus 2 ~iv~~Ll~~~~~~~l~~~------d~~g~T~Lh~Aa~---~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~i 72 (654)
++|+.|+++|+ ++|.+ |..|+||||+||. .|+.++|++|++.|++ +|.+|.+|+||||+||..|+.++
T Consensus 146 ~~v~~ll~~g~--~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~TpLh~A~~~g~~~~ 222 (497)
T 3lvq_E 146 LSVLEAFANGQ--DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDC 222 (497)
T ss_dssp HHHHHHHHTTC--CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCHHHHHTTTTCHHH
T ss_pred HHHHHHHhhcc--cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHH
Confidence 57899999997 67777 8899999999966 9999999999999998 99999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCCHHHHHhcC
Q 038131 73 FLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVSPLHLLATK 139 (654)
Q Consensus 73 v~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~TpLh~A~~~ 139 (654)
|++|+++|++++ .+|..|.||||+|+..|+.+++++|++++++ ++. +|+|.+...
T Consensus 223 v~~Ll~~ga~~~-----~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 223 LKLLLKGRALVG-----TVNEAGETALDIARKKHHKECEELLEQAQAG-TFA------FPLHVDYSW 277 (497)
T ss_dssp HHHHHHTCCCCS-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred HHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-CCC------Ccceeeccc
Confidence 999999999998 8999999999999999999999999999987 544 688877654
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=1.2e-18 Score=148.87 Aligned_cols=94 Identities=21% Similarity=0.196 Sum_probs=85.6
Q ss_pred ccccCCCCCChHHHHHHhcCCHHHHHHHHhhCCccccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCC
Q 038131 15 VLKIGDERGSTPLHIAAGLGNVSMCKCIATADPRLIGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNE 94 (654)
Q Consensus 15 ~l~~~d~~g~T~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 94 (654)
.....|.+|+||||+||..|+.+++++|++.+++ ++.+|..|+||||+||..|+.+++++|+++|++++ .+|..
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-----~~d~~ 89 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-----AQDKF 89 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----CCCTT
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-----ccccC
Confidence 4667889999999999999999999999999988 99999999999999999999999999999999998 89999
Q ss_pred CCcHHHHHHHcCCHHHHHHH
Q 038131 95 GDTVLHCAISGDYFDLAFQI 114 (654)
Q Consensus 95 g~T~Lh~A~~~g~~~~v~~L 114 (654)
|.||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999876
No 113
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=6.5e-19 Score=151.73 Aligned_cols=103 Identities=22% Similarity=0.270 Sum_probs=98.2
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCCCC
Q 038131 52 ERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQGVS 131 (654)
Q Consensus 52 ~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~T 131 (654)
.+|.+|+||||+||..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-----~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVN-----ARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSS-----CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-----CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCC
Confidence 578999999999999999999999999999988 8999999999999999999999999999987 9999999999
Q ss_pred HHHHHhcCCCCCccCCchHHHHHHhhccCcccccch
Q 038131 132 PLHLLATKPNAFRSGSHLGLCTGIIYHCISVDKLQE 167 (654)
Q Consensus 132 pLh~A~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 167 (654)
|||+|+..+ +.+++++|+++|++++..+.
T Consensus 78 pl~~A~~~~-------~~~~~~~Ll~~ga~~n~~~~ 106 (115)
T 2l6b_A 78 PEHLAKKNG-------HHEIVKLLDAKGADVNARSW 106 (115)
T ss_dssp TTHHHHTTT-------CHHHHHHHHTTSSSHHHHSC
T ss_pred HHHHHHHCC-------CHHHHHHHHHcCCCCCcCCc
Confidence 999999999 89999999999999987764
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=3e-17 Score=140.01 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=84.8
Q ss_pred ccCCCCCCChHHHHHHHcCCHHHHHHHHhhcCCCCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHhccccccccccCC
Q 038131 50 IGERNHENETPFFLAALHGHKDAFLCLHYLCASVDDGYTYSRRNEGDTVLHCAISGDYFDLAFQIIHRCEKLVNSVNEQG 129 (654)
Q Consensus 50 ~~~~d~~G~TpLh~Aa~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g 129 (654)
....|.+|+||||+||..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++++++ ++.+|..|
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-----~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g 90 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVA-----AKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKFG 90 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-----CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccCC
Confidence 55678899999999999999999999999999998 8999999999999999999999999999987 99999999
Q ss_pred CCHHHHHhcCCCCCccCCchHHHHHH
Q 038131 130 VSPLHLLATKPNAFRSGSHLGLCTGI 155 (654)
Q Consensus 130 ~TpLh~A~~~~~~~~~~~~~~~v~~L 155 (654)
.||||+|+..+ +.+++++|
T Consensus 91 ~tpl~~A~~~~-------~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNG-------NEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHT-------CHHHHHHH
T ss_pred CcHHHHHHHcC-------CHHHHHHh
Confidence 99999999999 89998876
No 115
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=35.14 E-value=1.8e+02 Score=28.73 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=24.8
Q ss_pred HHHHhhhhhccCCccchhhHHHHHHHHHHHHHHHhhhhH
Q 038131 593 SFCAGHFLVVRDNLKYAAFPLYAGTGLPLTLFAIARFPH 631 (654)
Q Consensus 593 af~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 631 (654)
.|...+.-.+|+.+..-++-++.+.|+.+.+.+++.+..
T Consensus 258 v~~~~~~~~lP~~S~v~~id~~~~~~~~~v~~slle~~~ 296 (347)
T 3rhw_A 258 AQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFAL 296 (347)
T ss_dssp HHHHHHHHTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCccceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 466667777887766566667777776655555544443
No 116
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=34.82 E-value=1.1e+02 Score=27.27 Aligned_cols=19 Identities=26% Similarity=0.448 Sum_probs=10.5
Q ss_pred hhHHHHHHHHHHHHHHHhh
Q 038131 610 AFPLYAGTGLPLTLFAIAR 628 (654)
Q Consensus 610 ~~~i~~~~~~~~~~~~~~~ 628 (654)
-+.+|+.+...+++|.++-
T Consensus 55 qilVYvGAi~VLflFvvMl 73 (184)
T 3rko_J 55 EIIVYAGAIMVLFVFVVMM 73 (184)
T ss_dssp HHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3456666665555555543
No 117
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=20.37 E-value=1.1e+02 Score=30.31 Aligned_cols=21 Identities=10% Similarity=0.085 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 038131 581 TSLFVSIASMLISFCAGHFLV 601 (654)
Q Consensus 581 ~~~~~s~~~m~~af~~~~~~~ 601 (654)
.+..+|+..|...|++|+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 456777888888999999954
No 118
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=20.18 E-value=1.6e+02 Score=21.93 Aligned_cols=39 Identities=10% Similarity=0.104 Sum_probs=25.9
Q ss_pred HHHhhhhhccCCccchhhHHHHHHHHHHHHHHHhhhhHH
Q 038131 594 FCAGHFLVVRDNLKYAAFPLYAGTGLPLTLFAIARFPHC 632 (654)
Q Consensus 594 f~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 632 (654)
..++.-.-+|..+..-++-++.++|+...|..++.+...
T Consensus 18 ~~~~~~~~lPkVSYikAiDvw~~~C~~FVF~aLlEya~V 56 (76)
T 1vry_A 18 QSSGSRASLPKVSYVKAIDIWLAVCLLFVFSALLEYAAV 56 (76)
T ss_dssp HHHCTTTCCCSHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred HhcCcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444556666667777888888887777776666543
Done!