BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038133
(671 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 1199 bits (3102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/699 (84%), Positives = 625/699 (89%), Gaps = 37/699 (5%)
Query: 8 GGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER 67
+N KKP+FLTKAQREQLAL+RR E+IA+QKRR EQQ LL + G +SS + +
Sbjct: 16 AATNMKKPVFLTKAQREQLALQRRHEEIAEQKRRAEQQ--LLQARSSSGNHSSHAASTNK 73
Query: 68 -----------------------------------ERHRREREEEAKARERARLEKLAER 92
REREEEAK RERAR EKLA+R
Sbjct: 74 PSDPSLDSRHHRSSRDRDRDRDRDRDRDRDRDSERRNRDREREEEAKVRERARSEKLADR 133
Query: 93 ERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLF 152
ERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+LYQNPHEAQLLF
Sbjct: 134 EREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLF 193
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR 212
GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEE+PEEAAA + KE+AA+LYDTFDMR
Sbjct: 194 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEERPEEAAAQRQKEQAAELYDTFDMR 253
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYK 272
VDRHW+EKKLEEMTERDWRIFREDFNISYKGSKIPRPMR+W E KL+ ELL+AVER GYK
Sbjct: 254 VDRHWTEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVESKLSTELLKAVERAGYK 313
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP+SEENEAEGPYAVV
Sbjct: 314 TPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEENEAEGPYAVV 373
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
MAPTRELAQQIE+ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL
Sbjct: 374 MAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 433
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTT 452
ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK+IYRTT
Sbjct: 434 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTT 493
Query: 453 YMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL 512
YMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+QHV+MMKESEK +LQ+LLDEL
Sbjct: 494 YMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQHVIMMKESEKMFKLQKLLDEL 553
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
GDKTAIVF+NTKK+AD +AK LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD
Sbjct: 554 GDKTAIVFINTKKSADNLAKGLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 613
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT HD+DVFYDLKQM
Sbjct: 614 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQM 673
Query: 633 LIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
LIQ+NSPVPPELA+HEASKFKPG IPDRPPRRNDTVFAH
Sbjct: 674 LIQNNSPVPPELARHEASKFKPGAIPDRPPRRNDTVFAH 712
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 1191 bits (3080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/690 (85%), Positives = 624/690 (90%), Gaps = 29/690 (4%)
Query: 11 NNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQ----QQLLSQPQTHGRNSSDSRD-- 64
N KKP+FLTKAQREQLAL+RRQE+IA+QKR EQQ + + +H +++ D
Sbjct: 20 NMKKPVFLTKAQREQLALQRRQEEIAEQKRCAEQQLLQARSSSANNSSHTASTNKPSDPS 79
Query: 65 -----------------------RERERHRREREEEAKARERARLEKLAERERERELELI 101
ER REREEEAK R ARLEKLAERERE+ELE I
Sbjct: 80 LDSRHHRSSRDRDRDRDRDRDRDSERRNRDREREEEAKVRGLARLEKLAEREREKELESI 139
Query: 102 KEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMD 161
KEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+LYQNPHEAQLLFGRGFRAGMD
Sbjct: 140 KEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMD 199
Query: 162 RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK 221
RREQKKLAAKNEKEMREEIRKKEGVEE+PEEAAA + KE+AA+LYDTFDMRVDRHW+EKK
Sbjct: 200 RREQKKLAAKNEKEMREEIRKKEGVEERPEEAAAQRQKEQAAELYDTFDMRVDRHWTEKK 259
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
LEEMTERDWRIFREDFN+SYKGSKIPRPMR+W E KL+PELL+AVER GYK PSPIQMAA
Sbjct: 260 LEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAA 319
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ
Sbjct: 320 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 379
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QIE+ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ
Sbjct: 380 QIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 439
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPP
Sbjct: 440 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPP 499
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFV 521
AVERLARKYLRNPVVVTIGTAGKAT+LI+QHV+M+K SEK +LQ+LLDELGDKTAIVF+
Sbjct: 500 AVERLARKYLRNPVVVTIGTAGKATDLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFI 559
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
NTKK+ D +AK LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP
Sbjct: 560 NTKKSTDTLAKGLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 619
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT HD+DVFYDLKQMLIQSNSPVP
Sbjct: 620 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQSNSPVP 679
Query: 642 PELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
PELA+HEASKFKPG+IPDRPPRRNDTVFAH
Sbjct: 680 PELARHEASKFKPGSIPDRPPRRNDTVFAH 709
>gi|449455778|ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
sativus]
Length = 715
Score = 1177 bits (3046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/697 (84%), Positives = 624/697 (89%), Gaps = 42/697 (6%)
Query: 12 NKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER---- 67
+ KP+FLTKAQREQLAL+RRQ++I+ Q+RRQ+Q LLS Q + SDS D +
Sbjct: 24 DSKPVFLTKAQREQLALQRRQDEISHQRRRQDQL--LLSNSQ---KPLSDSVDNHKPSDS 78
Query: 68 ---------------------------------ERHRREREEEAKARERARLEKLAERER 94
+EREEEAKARER RLEKLAERER
Sbjct: 79 DRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEEAKARERTRLEKLAERER 138
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
++EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN LYQNPHEAQLLFGR
Sbjct: 139 DKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNLLYQNPHEAQLLFGR 198
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
GFRAGMDRREQKKLAAKNEKEMREEIRKK+GVEEKPEEAAA KLKE+AADLYD+FDMRVD
Sbjct: 199 GFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQKLKEKAADLYDSFDMRVD 258
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR+W E KLT ELL+AVER GYK+P
Sbjct: 259 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLTTELLKAVERAGYKSP 318
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML YI+RLPPI+EENEAEGPYAVVMA
Sbjct: 319 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPINEENEAEGPYAVVMA 378
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELAQQIE+ETVKF+HYLGIKVVSIVGGQSIEEQGF+IRQGCEVVIATPGRL+DCLER
Sbjct: 379 PTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLER 438
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYM 454
RYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPENEDEELDEK+IYRTTYM
Sbjct: 439 RYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYM 498
Query: 455 FSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGD 514
FSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LISQHV+MMKESEKF RLQ LLD LGD
Sbjct: 499 FSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKFYRLQNLLDNLGD 558
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
KTAIVFVNTKKNAD VAKNLDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA
Sbjct: 559 KTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 618
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
GRGIDIPDVAHVINYDMP NIEMYTHRIGRTGRAGKTGVATTFLT D++VFYDLKQMLI
Sbjct: 619 GRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLTLQDSEVFYDLKQMLI 678
Query: 635 QSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
QSNSPVPPELA+HEASKFKPG+IPDRPPRRN+T+FAH
Sbjct: 679 QSNSPVPPELARHEASKFKPGSIPDRPPRRNETLFAH 715
>gi|449484526|ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Cucumis sativus]
Length = 715
Score = 1175 bits (3040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/697 (84%), Positives = 623/697 (89%), Gaps = 42/697 (6%)
Query: 12 NKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER---- 67
+ KP+FLTKAQREQLAL+RRQ++I+ Q+RRQ+Q LLS Q + SDS D +
Sbjct: 24 DSKPVFLTKAQREQLALQRRQDEISHQRRRQDQL--LLSNSQ---KPLSDSVDNHKPSDS 78
Query: 68 ---------------------------------ERHRREREEEAKARERARLEKLAERER 94
+EREEEAKARER RLEKLAERER
Sbjct: 79 DRRDRDRGRDRERDRDRDRARDRERDRDRDLERRNREKEREEEAKARERTRLEKLAERER 138
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
++EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN LYQNPHEAQLLFGR
Sbjct: 139 DKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNLLYQNPHEAQLLFGR 198
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
GFRAGMDRREQKKLAAKNEKEMREEIRKK+GVEEKPEEAAA KLKE+AADLYD+FDMRVD
Sbjct: 199 GFRAGMDRREQKKLAAKNEKEMREEIRKKDGVEEKPEEAAAQKLKEKAADLYDSFDMRVD 258
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR+W E KLT ELL+AVER GYK+P
Sbjct: 259 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTESKLTTELLKAVERAGYKSP 318
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML YI+RLPPI+EENEAEGPYAVVMA
Sbjct: 319 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYITRLPPINEENEAEGPYAVVMA 378
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELAQQIE+ETVKF+HYLGIKVVSIVGGQSIEEQGF+IRQGCEVVIATPGRL+DCLER
Sbjct: 379 PTRELAQQIEDETVKFSHYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDCLER 438
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYM 454
RYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPENEDEELDEK+ YRTTYM
Sbjct: 439 RYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKXYRTTYM 498
Query: 455 FSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGD 514
FSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LISQHV+MMKESEKF RLQ LLD LGD
Sbjct: 499 FSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKFYRLQNLLDNLGD 558
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
KTAIVFVNTKKNAD VAKNLDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA
Sbjct: 559 KTAIVFVNTKKNADTVAKNLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 618
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
GRGIDIPDVAHVINYDMP NIEMYTHRIGRTGRAGKTGVATTFLT D++VFYDLKQMLI
Sbjct: 619 GRGIDIPDVAHVINYDMPSNIEMYTHRIGRTGRAGKTGVATTFLTLQDSEVFYDLKQMLI 678
Query: 635 QSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
QSNSPVPPELA+HEASKFKPG+IPDRPPRRN+T+FAH
Sbjct: 679 QSNSPVPPELARHEASKFKPGSIPDRPPRRNETLFAH 715
>gi|224135589|ref|XP_002322111.1| predicted protein [Populus trichocarpa]
gi|222869107|gb|EEF06238.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 1164 bits (3011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/594 (93%), Positives = 576/594 (96%)
Query: 78 AKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 137
AKARE+ARL+KLAERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD
Sbjct: 117 AKAREQARLDKLAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 176
Query: 138 MNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALK 197
MN LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK+ R+E+RKKEGVE+ PEEAAA K
Sbjct: 177 MNILYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKDFRDELRKKEGVEKNPEEAAAQK 236
Query: 198 LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
LKEEAAD YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR+WAE K
Sbjct: 237 LKEEAADRYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWAESK 296
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L+ ELL+AVERV YK PSPIQMAAIPLGLQQRDVIGIAETGSGKT AFVLPMLTYISRLP
Sbjct: 297 LSSELLKAVERVVYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTCAFVLPMLTYISRLP 356
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P+SEENEAEGPYAVVMAPTRELAQQIE+ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG
Sbjct: 357 PMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 416
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPE
Sbjct: 417 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 476
Query: 438 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
NEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LISQHV+M K
Sbjct: 477 NEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMTK 536
Query: 498 ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
ESEK SRL RLLDELGDKTAIVFVNTKKNADMVAKNLDK GYRVTTLHGGKSQEQREISL
Sbjct: 537 ESEKSSRLHRLLDELGDKTAIVFVNTKKNADMVAKNLDKHGYRVTTLHGGKSQEQREISL 596
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA+TF
Sbjct: 597 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVASTF 656
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
LT DTDVFYDLKQMLIQSNS VPPELA+HEASKFKPGTIPDRPPRRNDTVFAH
Sbjct: 657 LTLGDTDVFYDLKQMLIQSNSSVPPELARHEASKFKPGTIPDRPPRRNDTVFAH 710
>gi|255561546|ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 714
Score = 1155 bits (2987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/588 (93%), Positives = 573/588 (97%)
Query: 84 ARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ 143
AR+EK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+LYQ
Sbjct: 127 ARVEKVAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQ 186
Query: 144 NPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAA 203
NPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEE+PEEAAA +LKEEAA
Sbjct: 187 NPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEERPEEAAARRLKEEAA 246
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
DLYDTFDMRVDRHWS+KKL+EMTERDWRIFREDFNISYKGSKIPRPMR+W E KLTPELL
Sbjct: 247 DLYDTFDMRVDRHWSDKKLDEMTERDWRIFREDFNISYKGSKIPRPMRSWPESKLTPELL 306
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 323
+AVER GY+ PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP+SE+N
Sbjct: 307 KAVERAGYEKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEDN 366
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
EAEGPYAVVMAPTRELAQQIE+ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA
Sbjct: 367 EAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 426
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL
Sbjct: 427 TPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 486
Query: 444 DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFS 503
DEK+IYRTTYMFSATMPPAVERLARKYLRNPVVV IGTAGKAT+LISQHV+M+KESEKF
Sbjct: 487 DEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVNIGTAGKATDLISQHVIMVKESEKFF 546
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+LQRLLDE GDKTAIVFVNTKKNAD VAKNLDK YRVTTLHGGKSQEQREISLEGFRTK
Sbjct: 547 KLQRLLDEAGDKTAIVFVNTKKNADTVAKNLDKAKYRVTTLHGGKSQEQREISLEGFRTK 606
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+Y VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK+GVATTFLT HDT
Sbjct: 607 KYTVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKSGVATTFLTLHDT 666
Query: 624 DVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
DVFYDLKQML+QSNS VPPELAKHEASKFKPGTIPDRPPRRNDTVFAH
Sbjct: 667 DVFYDLKQMLVQSNSHVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 714
>gi|356565647|ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Glycine max]
gi|356565649|ref|XP_003551051.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Glycine max]
Length = 706
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/586 (92%), Positives = 570/586 (97%)
Query: 86 LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
LEKLAERERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+LYQNP
Sbjct: 121 LEKLAEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNP 180
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HEAQLLFGRGFRAGMDRREQKKLAAKNEK+MR++IRKK+G+EE+PEEA A + KE AADL
Sbjct: 181 HEAQLLFGRGFRAGMDRREQKKLAAKNEKDMRDQIRKKDGLEERPEEADAQRRKEAAADL 240
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YDTFDMRVDRHWSEKKLEEMTERDWRIFRED+NISYKGSKIPRPMR+W E KLT ELL+A
Sbjct: 241 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWNESKLTNELLKA 300
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
VE+ GYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISE+NEA
Sbjct: 301 VEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEDNEA 360
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGPYAVVMAPTRELAQQIE+ETVKFA YLGIKVVSIVGGQSIEEQGF+IRQGCE+VIATP
Sbjct: 361 EGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATP 420
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPENEDEELDE
Sbjct: 421 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE 480
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
K+IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LISQHV+MMKE+EKFS+L
Sbjct: 481 KKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKEAEKFSKL 540
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
RLLDEL DKTAIVFVNTKKNAD VAKNLDK GYRVTTLHGGKSQEQREISLEGFRTKRY
Sbjct: 541 HRLLDELNDKTAIVFVNTKKNADHVAKNLDKDGYRVTTLHGGKSQEQREISLEGFRTKRY 600
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT HD+DV
Sbjct: 601 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDV 660
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
FYDLKQMLIQSNSPVPPELA+HEASKFKPGTIPDRPPRRNDTVFAH
Sbjct: 661 FYDLKQMLIQSNSPVPPELARHEASKFKPGTIPDRPPRRNDTVFAH 706
>gi|356522085|ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
max]
Length = 701
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/586 (92%), Positives = 568/586 (96%)
Query: 86 LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
LEKL ERERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+LYQNP
Sbjct: 116 LEKLVEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNP 175
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HEAQLLFGRGFRAGMDRREQKKLAAKNEK+MR++IRKK+G+EEKPEEA A + KE AADL
Sbjct: 176 HEAQLLFGRGFRAGMDRREQKKLAAKNEKDMRDQIRKKDGIEEKPEEADAQRRKEAAADL 235
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YDTFDMRVDRHWSEKKLEEMTERDWRIFRED+NISYKGSKIPRPMR+W E KLT ELL+A
Sbjct: 236 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWNESKLTSELLKA 295
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
VE+ GYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISE+NEA
Sbjct: 296 VEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEDNEA 355
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGPYAVVMAPTRELAQQIE+ETVKFA YLGIKVVSIVGGQSIEEQGF+IRQGCE+VIATP
Sbjct: 356 EGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATP 415
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPENEDEELDE
Sbjct: 416 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDE 475
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
K+IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LISQHV+MMKE+EKF +L
Sbjct: 476 KKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKEAEKFYKL 535
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
QRLLDEL DKTAIVFVNTK+NAD VAK+LDK GYRVTTLHGGKSQEQREISLEGFRTKRY
Sbjct: 536 QRLLDELNDKTAIVFVNTKRNADHVAKSLDKEGYRVTTLHGGKSQEQREISLEGFRTKRY 595
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT D+DV
Sbjct: 596 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDSDV 655
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
FYDLKQMLIQSNSPVPPELA+HEASKFKPGTIPDRPPRRNDTVFAH
Sbjct: 656 FYDLKQMLIQSNSPVPPELARHEASKFKPGTIPDRPPRRNDTVFAH 701
>gi|358347102|ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 781
Score = 1139 bits (2947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/592 (91%), Positives = 572/592 (96%)
Query: 79 KARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDM 138
K RERARLEKLAERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDM
Sbjct: 114 KVRERARLEKLAEREREKELDSIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDM 173
Query: 139 NALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKL 198
N LYQNPHEAQLLFGRGFRAGMDRREQKKLAAK+EKEMR++IRKK+GVEEKPEEA A +
Sbjct: 174 NVLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKHEKEMRDQIRKKDGVEEKPEEADAQRR 233
Query: 199 KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
KEEAAD YDTFDMRVDRHWSEKKLEEMTERDWRIFRED+NISYKGSKIPRPMR+W E KL
Sbjct: 234 KEEAADAYDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKL 293
Query: 259 TPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP 318
+ ELL+AVE+ GYK PSPIQMAAIPLGLQQRDVIG+AETGSGKTAAFVLPML+YI+RLPP
Sbjct: 294 SQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPP 353
Query: 319 ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 378
ISEENEAEGPYAVVMAPTRELAQQIE+ETVKFA Y+GIKVVSIVGGQSIEEQGF+IRQGC
Sbjct: 354 ISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQGFKIRQGC 413
Query: 379 EVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
E+VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPEN
Sbjct: 414 EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPEN 473
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LISQHV+MMKE
Sbjct: 474 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKE 533
Query: 499 SEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
SEK +LQRLLDEL DKTAIVFVNTKK+AD +AKNLDK GYRVTTLHGGKSQ+QREISLE
Sbjct: 534 SEKNYKLQRLLDELNDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLE 593
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL
Sbjct: 594 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 653
Query: 619 TFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
T DTDVFY+LKQMLIQSNSPVPPELA+HEASKFKPG+IPDRPPRRNDTVFA
Sbjct: 654 TLQDTDVFYELKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFA 705
>gi|147774689|emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]
Length = 661
Score = 1133 bits (2930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/678 (82%), Positives = 600/678 (88%), Gaps = 37/678 (5%)
Query: 13 KKPLFLTKAQREQLALERRQEQIAQQKRRQEQQ----QQLLSQPQTHGRNSSDSRD---- 64
KKP+FLTKAQREQLAL+RRQE+IA+QKR EQQ + + +H +++ D
Sbjct: 2 KKPVFLTKAQREQLALQRRQEEIAEQKRCAEQQLLQARSSSANNSSHTASTNKPSDPSLD 61
Query: 65 -----------RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKK 113
R+R+R R + R AR EKLAERERE+ELE IKEQYLGSKKPKK
Sbjct: 62 SRHHRSSRDRDRDRDRDRDRDRRGXRFRXLARXEKLAEREREKELESIKEQYLGSKKPKK 121
Query: 114 RVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNE 173
RVIKPSEKFRFSFDWENTEDTSRDMN+LYQNPH AQLLFGRGFRAGMDRREQKKLAAKNE
Sbjct: 122 RVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHXAQLLFGRGFRAGMDRREQKKLAAKNE 181
Query: 174 KEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIF 233
KEMREEIRKKEGVEE+PEEAAA + KE+AA+LYDTFDMRVDRHW+EKKLEEMTERDWRIF
Sbjct: 182 KEMREEIRKKEGVEERPEEAAAQRQKEQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIF 241
Query: 234 REDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIG 293
REDFN+SYKGSKIPRPMR+W E KL+PELL+AVER GYK PSPIQMAAIPLGLQQRDVIG
Sbjct: 242 REDFNVSYKGSKIPRPMRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIG 301
Query: 294 IAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
IAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE+ETVKFAHY
Sbjct: 302 IAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAHY 361
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
LGIKVVSIV VIATPGRLIDCLERRYAVLNQCNYVVLDEADRM
Sbjct: 362 LGIKVVSIV------------------VIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 403
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
IDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRN
Sbjct: 404 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRN 463
Query: 474 PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKN 533
PVVVTIGTAGKAT+LI+QHV+M+K SEK +LQ+LLDELGDKTAIVF+NTKK+ D +AK
Sbjct: 464 PVVVTIGTAGKATDLITQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKG 523
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG
Sbjct: 524 LDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 583
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 653
NIEMYTHRIGRTGRAGKTGVATTFLT HD+DVFYDLKQMLIQSNSPVPPELA+HEASKFK
Sbjct: 584 NIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQMLIQSNSPVPPELARHEASKFK 643
Query: 654 PGTIPDRPPRRNDTVFAH 671
PG+IPDRPPRRNDTVFAH
Sbjct: 644 PGSIPDRPPRRNDTVFAH 661
>gi|357495749|ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 666
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/667 (83%), Positives = 599/667 (89%), Gaps = 16/667 (2%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ---------THGRNSSDSRD 64
KP+FLTKAQREQ ALERR Q+A +++ LL +P D+RD
Sbjct: 7 KPVFLTKAQREQAALERRHNQVAASHKKE-----LLLRPSDSDRRSYRERDRERERDNRD 61
Query: 65 RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRF 124
RER REREEE KARE AR EKLAER+RE++LE IKEQYLGSKKPKKRVIKPSEKFRF
Sbjct: 62 RERRNRDREREEEDKAREHARSEKLAERKREQDLESIKEQYLGSKKPKKRVIKPSEKFRF 121
Query: 125 SFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKE 184
SFDWENTEDTSRD N LY+NPH AQLLFGRGF AGMDRREQKKLAAK EKEMR++IRKK+
Sbjct: 122 SFDWENTEDTSRDRNDLYENPHTAQLLFGRGFIAGMDRREQKKLAAKQEKEMRDQIRKKD 181
Query: 185 GVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
GVEEKPEEA A + KEEAAD YD FDMRVDRHWSEK LEEM ERDWRIFRED+NISYKGS
Sbjct: 182 GVEEKPEEADAQRRKEEAADAYDAFDMRVDRHWSEKNLEEMQERDWRIFREDYNISYKGS 241
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
KIPRP+R+W E KL+ E+L+AVE+ GYK PSPIQMA+IPLGLQQRDVIG+AETGSGKTAA
Sbjct: 242 KIPRPIRSWVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAA 301
Query: 305 FVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
FVLPML+YI+RLPPISEENEAEGPYAVVMAPTRELAQQIE+ETVKFA Y+GIKVVSIVGG
Sbjct: 302 FVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGG 361
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
QSIEEQGF+IRQGCE+VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV+G
Sbjct: 362 QSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMG 421
Query: 425 VLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
VLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP VERLARKYLRNPVVVTIGTAGK
Sbjct: 422 VLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGK 481
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
AT+LISQHV+MMKESEK L RLLD+L DKTAIVFVNTKK+AD +AKNL+ GYRVTTL
Sbjct: 482 ATDLISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLE--GYRVTTL 539
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGKSQ+QREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR
Sbjct: 540 HGGKSQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 599
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRR 664
TGRAGKTGVATTFLT DTDVFY+LKQMLIQSNSPVP ELA+HEASKFKPG+IPDRPPRR
Sbjct: 600 TGRAGKTGVATTFLTLQDTDVFYELKQMLIQSNSPVPHELARHEASKFKPGSIPDRPPRR 659
Query: 665 NDTVFAH 671
NDTVF H
Sbjct: 660 NDTVFTH 666
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/695 (79%), Positives = 590/695 (84%), Gaps = 69/695 (9%)
Query: 8 GGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER 67
+N KKP+FLTKAQREQLAL+RR E+IA+QKRR EQQ LL + G +SS + +
Sbjct: 62 AATNMKKPVFLTKAQREQLALQRRHEEIAEQKRRAEQQ--LLQARSSSGNHSSHAASTNK 119
Query: 68 -----------------------------------ERHRREREEEAKARERARLEKLAER 92
REREEEAK RERAR EKLA+R
Sbjct: 120 PSDPSLDSRHHRSSRDRDRDRDRDRDRDRDRDSERRNRDREREEEAKVRERARSEKLADR 179
Query: 93 ERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLF 152
ERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+LYQNPHEAQLLF
Sbjct: 180 EREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLF 239
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR 212
GRGFRAGMDR +++K E+AA+LYDTFDMR
Sbjct: 240 GRGFRAGMDRPQRQK--------------------------------EQAAELYDTFDMR 267
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYK 272
VDRHW+EKKLEEMTERDWRIFREDFNISYKGSKIPRPMR+W E KL+ ELL+AVER GYK
Sbjct: 268 VDRHWTEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVESKLSTELLKAVERAGYK 327
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP+SEENEAEGPYAVV
Sbjct: 328 TPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEENEAEGPYAVV 387
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
MAPTRELAQQIE+ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL
Sbjct: 388 MAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 447
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTT 452
ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK+IYRTT
Sbjct: 448 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTT 507
Query: 453 YMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL 512
YMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+QHV+MMKESEK +LQ+LLDEL
Sbjct: 508 YMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQHVIMMKESEKMFKLQKLLDEL 567
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
GDKTAIVF+NTKK+AD +AK LDK GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD
Sbjct: 568 GDKTAIVFINTKKSADNLAKGLDKAGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 627
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT HD+DVFYDLKQM
Sbjct: 628 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLHDSDVFYDLKQM 687
Query: 633 LIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDT 667
LIQ+NSPVPPELA+HEASKFKPG IPDRPPRRNDT
Sbjct: 688 LIQNNSPVPPELARHEASKFKPGAIPDRPPRRNDT 722
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/660 (83%), Positives = 586/660 (88%), Gaps = 34/660 (5%)
Query: 13 KKPLFLTKAQREQLALERRQEQIAQQKRRQE--QQQQLLSQPQTHGRNSSDSRDRERERH 70
KKP+FLTKAQREQLAL+RRQE+IA+QKR + S+ + R+ RD ER
Sbjct: 2 KKPVFLTKAQREQLALQRRQEEIAEQKRYPSLDSRHHRSSRDRDRDRDRDRDRDSERRNR 61
Query: 71 RREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWEN 130
REREEEAK R ARLEKLAERERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWEN
Sbjct: 62 DREREEEAKVRGLARLEKLAEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWEN 121
Query: 131 TEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKP 190
TEDTSRDMN+LYQNPHEAQLLFGRGFRAGMDR +++K
Sbjct: 122 TEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRPQRQK----------------------- 158
Query: 191 EEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPM 250
E+AA+LYDTFDMRVDRHW+EKKLEEMTERDWRIFREDFN+SYKGSKIPRPM
Sbjct: 159 ---------EQAAELYDTFDMRVDRHWTEKKLEEMTERDWRIFREDFNVSYKGSKIPRPM 209
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
R+W E KL+PELL+AVER GYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML
Sbjct: 210 RSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 269
Query: 311 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
TYISRLPPISEENEAEGPYAVVMAPTRELAQQIE+ETVKFAHYLGIKVVSIVGGQSIEEQ
Sbjct: 270 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIEEQ 329
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP
Sbjct: 330 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 389
Query: 431 SSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
SSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+
Sbjct: 390 SSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLIT 449
Query: 491 QHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQ 550
QHV+M+K SEK +LQ+LLDELGDKTAIVF+NTKK+ D +AK LDK GYRVTTLHGGKSQ
Sbjct: 450 QHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKAGYRVTTLHGGKSQ 509
Query: 551 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 610
EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK
Sbjct: 510 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 569
Query: 611 TGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
TGVATTFLT HD+DVFYDLKQMLIQSNSPVPPELA+HEASKFKPG+IPDRPPRRNDT F
Sbjct: 570 TGVATTFLTLHDSDVFYDLKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTYFC 629
>gi|15226155|ref|NP_180929.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
gi|75319077|sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|1707017|gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|17473908|gb|AAL38370.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|20259792|gb|AAM13243.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|330253781|gb|AEC08875.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
Length = 733
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/592 (87%), Positives = 559/592 (94%)
Query: 78 AKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 137
KARE+AR+EKL ERE+E+EL+ IKEQYLG KKPKKRVI+PSEKFRFSFDWENTEDTSRD
Sbjct: 140 VKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDTSRD 199
Query: 138 MNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALK 197
MN LYQNPHEAQLLFGRGFRAGMDRREQKK AAK+EKEMR+EIRKK+G+ EKPEEAAA +
Sbjct: 200 MNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAKHEKEMRDEIRKKDGIVEKPEEAAAQR 259
Query: 198 LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
++EEAAD YD+FDMRVDRHWS+K+LEEMTERDWRIFREDFNISYKGS+IPRPMR+W E K
Sbjct: 260 VREEAADTYDSFDMRVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESK 319
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
LT ELL+AVER GYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML YISRLP
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P+SEENE EGPYAVVMAPTRELAQQIEEETVKFAHYLG +V SIVGGQSIEEQG +I QG
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQG 439
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
CE+VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV GVLDAMPSSNLKPE
Sbjct: 440 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPE 499
Query: 438 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
NE+EELDEK+IYRTTYMFSATMPP VERLARKYLRNPVVVTIGTAGK T+LISQHV+MMK
Sbjct: 500 NEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMK 559
Query: 498 ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
ESEKF RLQ+LLDELG+KTAIVFVNTKKN D +AKNLDK GYRVTTLHGGKSQEQREISL
Sbjct: 560 ESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISL 619
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
EGFR KRYNVLVATDV GRGIDIPDVAHVINYDMP +IEMYTHRIGRTGRAGK+GVAT+F
Sbjct: 620 EGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSF 679
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
LT HDT+VFYDLKQML+QSNS VPPELA+HEAS+FKPGT+PDRPPR +DTV+
Sbjct: 680 LTLHDTEVFYDLKQMLVQSNSAVPPELARHEASRFKPGTVPDRPPRHSDTVY 731
>gi|297826827|ref|XP_002881296.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
gi|297327135|gb|EFH57555.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/587 (87%), Positives = 555/587 (94%)
Query: 83 RARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+AR+EKL ERERE+EL+ IKEQYLG KKPKKRVI+PSEKFRFSFDWENTEDTSRDMN LY
Sbjct: 143 KARVEKLVEREREKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDTSRDMNVLY 202
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEA 202
QNPHEAQLLFGRGFRAGMDRREQKK AAK+EKEMR+EIRKK+G+ E+PEEAAA +++EEA
Sbjct: 203 QNPHEAQLLFGRGFRAGMDRREQKKQAAKHEKEMRDEIRKKDGIVERPEEAAAQRVREEA 262
Query: 203 ADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPEL 262
AD YD+FDMRVDRHWS+K+LEEMTERDWRIFREDFNISYKGS+IPRPMR+W E KLT EL
Sbjct: 263 ADTYDSFDMRVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSEL 322
Query: 263 LRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE 322
L+AVER GYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML YISRLPP+SEE
Sbjct: 323 LKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEE 382
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
NE EGPYAVVMAPTRELAQQIEEETVKFAHYLG +V SIVGGQSIEEQG +I QGCE+VI
Sbjct: 383 NETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQGCEIVI 442
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV GVLDAMPSSNLKPENE+EE
Sbjct: 443 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEE 502
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
LDEK+IYRTTYMFSATMPP VERLARKYLRNPVVVTIGTAGK T+LISQHV+MMKESEKF
Sbjct: 503 LDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKF 562
Query: 503 SRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RLQ+LLDELGDKTAIVFVNTKKN D +AKNLDK GYRVTTLHGGKSQEQREISLEGFR
Sbjct: 563 FRLQKLLDELGDKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRA 622
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
KRYNVLVATDV GRGIDIPDVAHVINYDMP +IEMYTHRIGRTGRAGK+GVAT+FLT HD
Sbjct: 623 KRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHD 682
Query: 623 TDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
T+VFYDLKQML+QSNS VPPELA+HEAS+FKPGT+PDRPPR +DTV+
Sbjct: 683 TEVFYDLKQMLVQSNSAVPPELARHEASRFKPGTVPDRPPRHSDTVY 729
>gi|302759400|ref|XP_002963123.1| hypothetical protein SELMODRAFT_165735 [Selaginella moellendorffii]
gi|302796878|ref|XP_002980200.1| hypothetical protein SELMODRAFT_153756 [Selaginella moellendorffii]
gi|300151816|gb|EFJ18460.1| hypothetical protein SELMODRAFT_153756 [Selaginella moellendorffii]
gi|300169984|gb|EFJ36586.1| hypothetical protein SELMODRAFT_165735 [Selaginella moellendorffii]
Length = 574
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/574 (87%), Positives = 544/574 (94%)
Query: 98 LELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFR 157
++ IKEQYLG+KK KKRV+KPSEKFRFSFDWENTEDTSRDMN +YQNPHEAQLLFGRGFR
Sbjct: 1 MDAIKEQYLGTKKLKKRVVKPSEKFRFSFDWENTEDTSRDMNPIYQNPHEAQLLFGRGFR 60
Query: 158 AGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHW 217
AGMDRREQKKLAAKNEK++R EIR +G+EEKPEEA A KLKEEAA+ YD FDMRVDRHW
Sbjct: 61 AGMDRREQKKLAAKNEKDLRAEIRATKGLEEKPEEAKAQKLKEEAANAYDAFDMRVDRHW 120
Query: 218 SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPI 277
SEKKLE+MTERDWRIFREDFNISYKGS+IPRPMRNW EG L+ ELL+AV + GYKNPSPI
Sbjct: 121 SEKKLEDMTERDWRIFREDFNISYKGSRIPRPMRNWEEGGLSTELLKAVNKAGYKNPSPI 180
Query: 278 QMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTR 337
QMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP++EENEAEGPYAVVMAPTR
Sbjct: 181 QMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMTEENEAEGPYAVVMAPTR 240
Query: 338 ELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYA 397
ELAQQIEEETVKFAHYL I VVSIVGGQSIEEQGF++RQGCE+VIATPGRL+DCLERRYA
Sbjct: 241 ELAQQIEEETVKFAHYLDIHVVSIVGGQSIEEQGFKLRQGCEIVIATPGRLLDCLERRYA 300
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED ELDEK+IYRTTYMFSA
Sbjct: 301 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDAELDEKKIYRTTYMFSA 360
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
TMPPAVERLARKYLRNPVVVTIGTAGK T+LI+Q+V+M+K+SEK RLQR+L++L DKTA
Sbjct: 361 TMPPAVERLARKYLRNPVVVTIGTAGKTTDLITQNVLMVKDSEKLDRLQRMLNDLADKTA 420
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
IVFVNTKK AD +A+ LDKLGYRVTTLHGGK+QEQREISLEGFR+KRYN LVATDVAGRG
Sbjct: 421 IVFVNTKKAADGLARQLDKLGYRVTTLHGGKTQEQREISLEGFRSKRYNCLVATDVAGRG 480
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
IDIPDVAHVIN+DMP NIEMYTHRIGRTGRAGKTGVATTFLT DT+VFYDLKQML+QSN
Sbjct: 481 IDIPDVAHVINFDMPNNIEMYTHRIGRTGRAGKTGVATTFLTLGDTEVFYDLKQMLVQSN 540
Query: 638 SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
SPVPPEL++HEASKFKPGTIPDRP RRN+T++AH
Sbjct: 541 SPVPPELSRHEASKFKPGTIPDRPLRRNETLYAH 574
>gi|242033243|ref|XP_002464016.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
gi|241917870|gb|EER91014.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
Length = 750
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/586 (85%), Positives = 551/586 (94%)
Query: 86 LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
LEK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ+P
Sbjct: 164 LEKMAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQSP 223
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HEA+LLFGRGF AG+DRREQKK AA +EKE R E+R+K GVE++PE+ A K K AA++
Sbjct: 224 HEARLLFGRGFLAGIDRREQKKAAAAHEKETRAELRRKAGVEDRPEDDAVDKKKAAAAEM 283
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YD FDMRVDRHWSEK LEEMTERDWRIFREDFNISYKGS+IPRPMR W+E KL ELLRA
Sbjct: 284 YDAFDMRVDRHWSEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRA 343
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+++ GY+ PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISEENEA
Sbjct: 344 IDKAGYEKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEA 403
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IRQGCE+VIATP
Sbjct: 404 EGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATP 463
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE
Sbjct: 464 GRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 523
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M+KESEK RL
Sbjct: 524 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMVKESEKMPRL 583
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
Q++L +LGDKTAIVF NTKK ADM AK+LDK G+RVTTLHGGKSQ+QREISL+GFR +R+
Sbjct: 584 QKILTDLGDKTAIVFCNTKKTADMRAKDLDKAGFRVTTLHGGKSQDQREISLDGFRNRRF 643
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVAGRGIDIPDVAHVINY+MP +++ YTHRIGRTGRAGK GVAT+FLT +TD+
Sbjct: 644 NVLVATDVAGRGIDIPDVAHVINYEMPSSVDTYTHRIGRTGRAGKKGVATSFLTLENTDI 703
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
F+DLKQMLIQSNSPVPPELA+HEASKFKPG+IPDRPPRRNDTVFA+
Sbjct: 704 FFDLKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAN 749
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKR 40
KP+FLTKA+RE+LALERRQ ++ Q+R
Sbjct: 13 KPVFLTKAERERLALERRQAAVSDQRR 39
>gi|226490952|ref|NP_001152536.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195657271|gb|ACG48103.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|224030151|gb|ACN34151.1| unknown [Zea mays]
gi|414872390|tpg|DAA50947.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 1 [Zea mays]
gi|414872391|tpg|DAA50948.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 2 [Zea mays]
Length = 758
Score = 1056 bits (2732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/586 (85%), Positives = 551/586 (94%)
Query: 86 LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
LEK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ+P
Sbjct: 172 LEKMAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQSP 231
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HEA+LLFGRGF AG+DRREQKK AA +EKE R E+R+K GVE++PE+ A K K AA++
Sbjct: 232 HEARLLFGRGFLAGIDRREQKKAAAAHEKETRAELRRKAGVEDRPEDDAVDKKKAAAAEM 291
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YD FDMRVDRHWSEK LEEMTERDWRIFREDFNISYKGS+IPRPMR W+E KL ELLRA
Sbjct: 292 YDAFDMRVDRHWSEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRA 351
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+++ GY+ PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISEENEA
Sbjct: 352 IDKAGYEKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEA 411
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IRQGCE+VIATP
Sbjct: 412 EGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATP 471
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE
Sbjct: 472 GRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 531
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M+KESEK RL
Sbjct: 532 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMVKESEKMPRL 591
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
Q++L +LGDKTAIVF NTKK ADM AK+LDK G+RVTTLHGGKSQ+QREISL+GFR +R+
Sbjct: 592 QKILTDLGDKTAIVFCNTKKTADMRAKDLDKSGFRVTTLHGGKSQDQREISLDGFRNRRF 651
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVAGRGIDIPDVAHVINY+MP +++ YTHRIGRTGRAGK GVAT+FLT +TD+
Sbjct: 652 NVLVATDVAGRGIDIPDVAHVINYEMPSSVDTYTHRIGRTGRAGKKGVATSFLTLENTDI 711
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
F+DLKQMLIQSNSPVPPELA+HEASKFKPG+IPDRPPRRNDTVFA+
Sbjct: 712 FFDLKQMLIQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAN 757
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKR 40
KP+FLTKA+RE+LALERRQ ++ Q+R
Sbjct: 13 KPVFLTKAERERLALERRQAAVSDQRR 39
>gi|226510036|ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195614524|gb|ACG29092.1| ATP-dependent RNA helicase DDX23 [Zea mays]
Length = 736
Score = 1056 bits (2730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/586 (85%), Positives = 552/586 (94%)
Query: 86 LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
LEK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ+P
Sbjct: 150 LEKIAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQSP 209
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HEA+LLFGRGF AG+DRREQKK AA +EKE R E+R+K GVE++PE+ A K K AA++
Sbjct: 210 HEARLLFGRGFLAGIDRREQKKAAAVHEKETRAELRRKAGVEDRPEDDAVDKKKAAAAEI 269
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YD FDMRVDRHWSEK LEEMTERDWRIFREDFNISYKGS+IPRPMR W+E KL ELLRA
Sbjct: 270 YDAFDMRVDRHWSEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRA 329
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+++ GY+ PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISEENEA
Sbjct: 330 IDKAGYEKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEA 389
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGPYAVVMAPTRELAQQIEEETVKFA YLG+KVVSIVGGQSIEEQGF+IRQGCE+VIATP
Sbjct: 390 EGPYAVVMAPTRELAQQIEEETVKFATYLGLKVVSIVGGQSIEEQGFKIRQGCEIVIATP 449
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE
Sbjct: 450 GRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 509
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M+KESEK RL
Sbjct: 510 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMVKESEKMPRL 569
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
Q++L +LGDKTAIVF NTKK ADM AK+LDK G+RVTTLHGGKSQ+QREISL+GFR +R+
Sbjct: 570 QKILTDLGDKTAIVFCNTKKTADMRAKDLDKAGFRVTTLHGGKSQDQREISLDGFRNRRF 629
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVAGRGIDIPDVAHVINY+MP +I+ YTHRIGRTGRAGK GVAT+FLT+ +TD+
Sbjct: 630 NVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGVATSFLTYENTDI 689
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
F+DLKQML+QSNSPVPPELA+HEASKFKPG+IPDRPPRRNDTVFA+
Sbjct: 690 FFDLKQMLMQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAN 735
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKR 40
KP+FLTKA+RE+LALERRQ ++ Q+R
Sbjct: 13 KPVFLTKAERERLALERRQAAVSDQRR 39
>gi|223944961|gb|ACN26564.1| unknown [Zea mays]
gi|413933312|gb|AFW67863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 734
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/586 (85%), Positives = 552/586 (94%)
Query: 86 LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
LEK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ+P
Sbjct: 148 LEKIAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQSP 207
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HEA+LLFGRGF AG+DRREQKK AA +EKE R E+R+K GVE++PE+ A K K AA++
Sbjct: 208 HEARLLFGRGFLAGIDRREQKKAAAVHEKETRAELRRKAGVEDRPEDDAVDKKKAAAAEI 267
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YD FDMRVDRHWSEK LEEMTERDWRIFREDFNISYKGS+IPRPMR W+E KL ELLRA
Sbjct: 268 YDAFDMRVDRHWSEKTLEEMTERDWRIFREDFNISYKGSRIPRPMRKWSESKLGTELLRA 327
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+++ GY+ PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISEENEA
Sbjct: 328 IDKAGYEKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEA 387
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGPYAVVMAPTRELAQQIEEETVKFA YLG+KVVSIVGGQSIEEQGF+IRQGCE+VIATP
Sbjct: 388 EGPYAVVMAPTRELAQQIEEETVKFATYLGLKVVSIVGGQSIEEQGFKIRQGCEIVIATP 447
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE
Sbjct: 448 GRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 507
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M+KESEK RL
Sbjct: 508 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMVKESEKMPRL 567
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
Q++L +LGDKTAIVF NTKK ADM AK+LDK G+RVTTLHGGKSQ+QREISL+GFR +R+
Sbjct: 568 QKILTDLGDKTAIVFCNTKKTADMRAKDLDKAGFRVTTLHGGKSQDQREISLDGFRNRRF 627
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVAGRGIDIPDVAHVINY+MP +I+ YTHRIGRTGRAGK GVA++FLT+ +TD+
Sbjct: 628 NVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGVASSFLTYENTDI 687
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
F+DLKQML+QSNSPVPPELA+HEASKFKPG+IPDRPPRRNDTVFA+
Sbjct: 688 FFDLKQMLMQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAN 733
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 24/27 (88%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKR 40
KP+FLTKA+RE+LALERRQ ++ Q+R
Sbjct: 13 KPVFLTKAERERLALERRQAAVSDQRR 39
>gi|115454875|ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase, putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710690|gb|ABF98485.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113549509|dbj|BAF12952.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 736
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/589 (83%), Positives = 547/589 (92%)
Query: 82 ERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNAL 141
E+ RLEK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+L
Sbjct: 146 EKDRLEKMAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSL 205
Query: 142 YQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEE 201
YQ+PHEA+LL+GRGF AG+DRREQKK+AA +EKE R E R+K G++++PE+ A K + +
Sbjct: 206 YQSPHEARLLYGRGFLAGIDRREQKKVAAAHEKETRAEQRRKAGLDDRPEDDAVDKKEAD 265
Query: 202 AADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE 261
AA YD FDMRVDRHW++K L+EMTERDWRIFREDFNISYKGSK+PRPMR W+E KL E
Sbjct: 266 AAAKYDAFDMRVDRHWTQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTE 325
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
LLRAVE+ GYK PSPIQMA+IPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISE
Sbjct: 326 LLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISE 385
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
ENEAEGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IRQGCEVV
Sbjct: 386 ENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVV 445
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
IATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE
Sbjct: 446 IATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 505
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
ELD K IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M KESEK
Sbjct: 506 ELDAKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTKESEK 565
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
SRLQ++L +LGDK AIVF NTKK+AD AK+LDK G+RVTTLHGGKSQEQRE SL+GFR
Sbjct: 566 MSRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFR 625
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+R+ VLVATDVAGRGIDIPDVAHVINY+MP +I+ YTHRIGRTGRAGK G+AT+FLT
Sbjct: 626 NRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLE 685
Query: 622 DTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+TD+F+DLKQMLIQSNSPVPPELA+HEASKFKPG++PDRPPRRNDTV+A
Sbjct: 686 NTDIFFDLKQMLIQSNSPVPPELARHEASKFKPGSVPDRPPRRNDTVYA 734
>gi|357118013|ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Brachypodium distachyon]
gi|357118015|ref|XP_003560755.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Brachypodium distachyon]
Length = 734
Score = 1036 bits (2679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/595 (84%), Positives = 555/595 (93%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E K RE+ RLEK+AERERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS
Sbjct: 138 ERDKDREKDRLEKMAEREREKELEAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 197
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
RDMNALYQ PHEA+LL+GRGF AG+DRREQKK AA EKE R E R+K GVE++PE+ A
Sbjct: 198 RDMNALYQTPHEARLLYGRGFLAGIDRREQKKAAAVFEKETRAEQRRKFGVEDRPEDDVA 257
Query: 196 LKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE 255
K K AA++YD FDMRVDRHWSEK +EEMTERDWRIFREDFNISYKGS+IPRPMRNW E
Sbjct: 258 DKKKAAAAEMYDAFDMRVDRHWSEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPE 317
Query: 256 GKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR 315
KL ELLRA+++VGYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+R
Sbjct: 318 SKLGAELLRAIDKVGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITR 377
Query: 316 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IR
Sbjct: 378 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIR 437
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
QGCEVVIATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK
Sbjct: 438 QGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 497
Query: 436 PENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
PENE+EELDEK+IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M
Sbjct: 498 PENEEEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIM 557
Query: 496 MKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
+KESEK SRLQ++L +LGDKTAIVF NTKK+AD AK+LDK G+RVTTLHGGKSQ+QREI
Sbjct: 558 VKESEKMSRLQKILTDLGDKTAIVFCNTKKSADNRAKDLDKAGFRVTTLHGGKSQDQREI 617
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
SL+GFR +R+NVLVATDVAGRGIDIPDVAHVINY+MP +++ YTHRIGRTGRAGK G+AT
Sbjct: 618 SLDGFRNRRFNVLVATDVAGRGIDIPDVAHVINYEMPSSVDTYTHRIGRTGRAGKKGLAT 677
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+FLT +TD+F+DLKQMLIQSNSPVPPELA+HEASKFKPG++PDRPPRRNDTV+A
Sbjct: 678 SFLTLDNTDIFFDLKQMLIQSNSPVPPELARHEASKFKPGSVPDRPPRRNDTVYA 732
>gi|310656783|gb|ADP02213.1| putative DEAD-box ATP-dependent RNA helicase [Triticum aestivum]
Length = 742
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/595 (84%), Positives = 552/595 (92%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E K RE+ RLEK+AERERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS
Sbjct: 146 ERDKDREKDRLEKMAEREREKELEAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 205
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
RDMN LYQ PHEA+LL+GRGF AG+DRREQKK AA EKE R E R+K GVE++PE+ A
Sbjct: 206 RDMNMLYQAPHEARLLYGRGFLAGIDRREQKKAAAVFEKETRAEQRRKFGVEDRPEDDVA 265
Query: 196 LKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE 255
K K AA++YD FDMRVDRHWSEK +EEMTERDWRIFREDFNISYKGS+IPRPMRNW E
Sbjct: 266 DKKKAAAAEMYDAFDMRVDRHWSEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPE 325
Query: 256 GKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR 315
KL ELLRA+E+VGYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+R
Sbjct: 326 SKLGTELLRAIEKVGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITR 385
Query: 316 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
LPPISE+NEAEGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IR
Sbjct: 386 LPPISEDNEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIR 445
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
QGCEVVIATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK
Sbjct: 446 QGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 505
Query: 436 PENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
PENE+EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M
Sbjct: 506 PENEEEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIM 565
Query: 496 MKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
+KESEK SRLQ++L +LGDKTAIVF NTKK+AD AK+LDK G+RVT LHGGKSQ+QREI
Sbjct: 566 VKESEKMSRLQKILTDLGDKTAIVFCNTKKSADNRAKDLDKAGFRVTALHGGKSQDQREI 625
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
SL+GFR +R+NVLVATDVAGRGIDIPDVAHVINY+MP +++ YTHRIGRTGRAGK G+AT
Sbjct: 626 SLDGFRNRRFNVLVATDVAGRGIDIPDVAHVINYEMPSSVDTYTHRIGRTGRAGKKGLAT 685
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+FLT +TD+F+DLKQML QSNSPVPPELA+HEASKFKPG++PDRPPRRNDTV+A
Sbjct: 686 SFLTLDNTDIFFDLKQMLTQSNSPVPPELARHEASKFKPGSVPDRPPRRNDTVYA 740
>gi|326526777|dbj|BAK00777.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 1030 bits (2662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/595 (84%), Positives = 552/595 (92%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E K RE+ RLEK+AERERE+ELE IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS
Sbjct: 135 ERDKDREKDRLEKMAEREREKELEAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 194
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
RDMN LYQ PHEA+LL+GRGF AG+DRREQKK AA EKE R E R+K GVE++PE+ A
Sbjct: 195 RDMNMLYQAPHEARLLYGRGFLAGIDRREQKKAAAVFEKETRAEQRRKFGVEDRPEDDVA 254
Query: 196 LKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE 255
K K AA++YD FDMRVDRHWSEK +EEMTERDWRIFREDFNISYKGS+IPRPMRNW E
Sbjct: 255 DKKKAAAAEMYDAFDMRVDRHWSEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPE 314
Query: 256 GKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR 315
KL ELLRA+E+VGYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+R
Sbjct: 315 SKLGTELLRAIEKVGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITR 374
Query: 316 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
LPPISE+NEAEGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IR
Sbjct: 375 LPPISEDNEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIR 434
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
QGCEVVIATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK
Sbjct: 435 QGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 494
Query: 436 PENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
PENE+EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M
Sbjct: 495 PENEEEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIM 554
Query: 496 MKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
+KESEK SRLQ++L +LGDKTAIVF NTKK+AD AK+LDK G+RVT LHGGKSQ+QREI
Sbjct: 555 VKESEKMSRLQKILTDLGDKTAIVFCNTKKSADNRAKDLDKAGFRVTALHGGKSQDQREI 614
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
SL+GFR +R+NVLVATDVAGRGIDIPDVAHVINY+MP +++ YTHRIGRTGRAGK G+AT
Sbjct: 615 SLDGFRNRRFNVLVATDVAGRGIDIPDVAHVINYEMPSSVDTYTHRIGRTGRAGKKGLAT 674
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+FLT +TD+F+DLKQML QSNSPVPPELA+HEASKFKPG++PDRPPRRNDTV+A
Sbjct: 675 SFLTLDNTDIFFDLKQMLTQSNSPVPPELARHEASKFKPGSVPDRPPRRNDTVYA 729
>gi|168025828|ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683285|gb|EDQ69696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 535
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/534 (86%), Positives = 510/534 (95%)
Query: 138 MNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALK 197
MN +YQNPHEAQLLFGRGFRAGMDRREQKKLAAKNE ++R+EIR K G+EE+PEE AA K
Sbjct: 1 MNPIYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNENDLRKEIRLKVGLEERPEEIAAQK 60
Query: 198 LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
KEEAA++YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS+IPRPMRNWAEG
Sbjct: 61 QKEEAANMYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRNWAEGA 120
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L+PELL+AV++VGY PSPIQMAAIP+GLQQRDVIGIAETGSGKTAAFVLPMLTYIS+LP
Sbjct: 121 LSPELLKAVQKVGYTKPSPIQMAAIPIGLQQRDVIGIAETGSGKTAAFVLPMLTYISKLP 180
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P++EE EAEGPYAVVMAPTRELAQQIE+ETVKFAH+L I+VVSIVGGQSIEEQGF++RQG
Sbjct: 181 PMTEEIEAEGPYAVVMAPTRELAQQIEDETVKFAHFLDIRVVSIVGGQSIEEQGFKLRQG 240
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
CEVVIATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV+GVLDAMPSSNLKPE
Sbjct: 241 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPE 300
Query: 438 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
NED ELD +IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+QHV+M+K
Sbjct: 301 NEDAELDTHKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQHVIMVK 360
Query: 498 ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
E+EK RL R+L+++GDKTAI+FVNTKK+AD +++ LDK GYRVTTLHGGK+QEQRE+SL
Sbjct: 361 ETEKLDRLCRVLNDMGDKTAIIFVNTKKSADTLSRQLDKNGYRVTTLHGGKTQEQREVSL 420
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
+GFR KR+N LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG+ATTF
Sbjct: 421 DGFRNKRFNCLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGIATTF 480
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
LT HDTDVFYDLKQML+QSNSPVPPELA+HEASKFKPG+IPDRPPRRNDTVFA+
Sbjct: 481 LTLHDTDVFYDLKQMLVQSNSPVPPELARHEASKFKPGSIPDRPPRRNDTVFAN 534
>gi|242069203|ref|XP_002449878.1| hypothetical protein SORBIDRAFT_05g024780 [Sorghum bicolor]
gi|241935721|gb|EES08866.1| hypothetical protein SORBIDRAFT_05g024780 [Sorghum bicolor]
Length = 688
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/697 (60%), Positives = 511/697 (73%), Gaps = 49/697 (7%)
Query: 1 MNRLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQ-------QQQLLSQPQ 53
M R VD + KP+F++KA+RE+ A+ERRQ +R Q Q +
Sbjct: 1 MTRSVD--AVDLAKPVFISKAERERHAIERRQAAAVSGQRDLLQSHPFPREQAADRDGRR 58
Query: 54 THGRNSSDSRDRERERHRREREEEAKARERA-----------------RLEKLAERERER 96
R+ SR R+RE H R ++ + RLE +A RE
Sbjct: 59 DRDRDRYISRHRDREGHLRSSRQDQDGDRKRGRDRGTGRGHDGGERDDRLETMAMAAREW 118
Query: 97 ELEL----IKEQYLGSKKPKKRVI-KPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ-- 149
E EL IKEQ+LGSKKP+KR I KPSEKFRFSFDW+NT+DTSR+ +A+ + PHEA
Sbjct: 119 EKELDAIAIKEQHLGSKKPRKRSIPKPSEKFRFSFDWDNTDDTSRN-DAVQKQPHEAAPP 177
Query: 150 ---LLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY 206
LLFGRGF AG+DRR+QKK AA K R R+ V+E +AA DLY
Sbjct: 178 PPLLLFGRGFLAGIDRRDQKKKAAAALKLNRP--RRNGAVDEDYRDAAD-------GDLY 228
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ DM VDRHWS+K LEEMTERDWRIFREDF+ISY+GS +P+PMR+W++ KL +LLRAV
Sbjct: 229 EASDMHVDRHWSDKALEEMTERDWRIFREDFSISYQGSGVPKPMRHWSKSKLGAKLLRAV 288
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
+ GY+ PSPIQMAAIPLGLQQRD I +AETGSGKTAAF LP+L+Y++ LPPI++EN +
Sbjct: 289 DEAGYRKPSPIQMAAIPLGLQQRDAIAVAETGSGKTAAFALPLLSYVAGLPPITDENRHD 348
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQS---IEEQGFRIRQGCEVVIA 383
GPYA+VM PTREL++QI EET + A YLG++VV + GG S I EQ RI++GCEVV+A
Sbjct: 349 GPYALVMVPTRELSEQIAEETARLARYLGVRVVPVFGGGSEKTIAEQSERIQKGCEVVVA 408
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRL+D LERRY VLNQCNYVVLDEADRMIDMGFEPQV VL MPSSNLKP+NEDEEL
Sbjct: 409 TPGRLLDLLERRYVVLNQCNYVVLDEADRMIDMGFEPQVASVLAVMPSSNLKPQNEDEEL 468
Query: 444 DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFS 503
DEK++YRTT+MFSATMPPAVERLAR YLRNPVVVTIGT GKATELI+Q+V+M+KESEK
Sbjct: 469 DEKKVYRTTFMFSATMPPAVERLARTYLRNPVVVTIGTPGKATELITQNVMMLKESEKMP 528
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+L RLL +L DKT IVF NTKK D L G+ VT LHG +Q +R+ SL+GFR +
Sbjct: 529 QLHRLLRDLRDKTVIVFCNTKKTTDWCFNELKNAGFGVTALHGNLTQAERKASLDGFRNR 588
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
++NVLVA++VA RGI+IPDVAHVINYDMP +I Y H IGRTGRAGK GVAT+FLT +T
Sbjct: 589 QFNVLVASEVAARGINIPDVAHVINYDMPSSINKYIHCIGRTGRAGKKGVATSFLTLENT 648
Query: 624 DVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDR 660
D+F+DLKQMLIQSNS VPPELAKH+AS+FKPG+IP+R
Sbjct: 649 DIFFDLKQMLIQSNSHVPPELAKHKASQFKPGSIPER 685
>gi|159469610|ref|XP_001692956.1| pre-mRNA-splicing ATP-dependent RNA helicase [Chlamydomonas
reinhardtii]
gi|158277758|gb|EDP03525.1| pre-mRNA-splicing ATP-dependent RNA helicase [Chlamydomonas
reinhardtii]
Length = 571
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/571 (66%), Positives = 464/571 (81%), Gaps = 1/571 (0%)
Query: 100 LIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAG 159
+IK+QYLG +K KKRV++PSEKF+F+FDW++ +DTSRD+N LY N HEA L+FGRG RAG
Sbjct: 1 MIKQQYLGMEKLKKRVLRPSEKFKFNFDWDSKDDTSRDLNPLYNNLHEAALMFGRGMRAG 60
Query: 160 MDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSE 219
+DRREQKK+AA E E+ + R G+E+ E + ++ AD YD FDMRV++HW+E
Sbjct: 61 IDRREQKKVAAALETEILRKTRMAAGIEDTHETREHDRERKRLADQYDGFDMRVEKHWTE 120
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K L+EM ERDWRIFREDFNI Y+G P+R W E L LL+A+E+VGYK PSPIQM
Sbjct: 121 KSLDEMNERDWRIFREDFNIGYRGVNTVLPIRKWEESGLPSLLLKAIEKVGYKKPSPIQM 180
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
AAIPLGL+QRDVIGIAETGSGKTAAFVLPML YI R PP++EENEA+GPYAVV+APTREL
Sbjct: 181 AAIPLGLKQRDVIGIAETGSGKTAAFVLPMLAYIMRQPPMNEENEADGPYAVVLAPTREL 240
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQIEEET K AHY G +V S+VGGQSIEEQG ++R+GCE+VIATPGRL+DC++R YAVL
Sbjct: 241 AQQIEEETHKLAHYTGYRVTSVVGGQSIEEQGTKLRKGCEIVIATPGRLLDCIDRHYAVL 300
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATM 459
NQCNYVVLDEADRMID+GFEPQV+GVLDAMP S LKP+ E L+E R YRTTYMFSATM
Sbjct: 301 NQCNYVVLDEADRMIDLGFEPQVIGVLDAMPKSTLKPDEEGAVLEENRTYRTTYMFSATM 360
Query: 460 PPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIV 519
PPAVERLA+KYLR PVVV IG+AG+ T+ ++Q V ++KE+EK L++ L+ + +K IV
Sbjct: 361 PPAVERLAKKYLRRPVVVVIGSAGRVTDNVTQRVFVVKENEKGRLLEQELNNVDEKRVIV 420
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FVNT++ D V +++D+LGY T LHGGK+Q+QRE ++GFR YNVL+ATDVAGRGID
Sbjct: 421 FVNTQRQCDNVHRHMDELGYHCTILHGGKTQDQREAGIKGFRDGTYNVLIATDVAGRGID 480
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+PDVA V+NYDMP NIE YTHRIGRTGRAG+ G+A TFLT DT VF+DLK++L S +
Sbjct: 481 VPDVALVVNYDMPTNIENYTHRIGRTGRAGRKGIAVTFLTLGDTGVFFDLKKLLEDSKAA 540
Query: 640 VPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
VPPELA+HEASK KPGT+ + R++ TVFA
Sbjct: 541 VPPELARHEASKVKPGTVEAK-SRKDQTVFA 570
>gi|384251199|gb|EIE24677.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 735
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/582 (66%), Positives = 475/582 (81%), Gaps = 5/582 (0%)
Query: 91 ERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQL 150
+RERE+EL LIK+QYLG++K +K+ +KPSEKFRF+FDWE +DTS+D+N LY N HEA L
Sbjct: 157 DREREKELLLIKQQYLGTEKVRKKTLKPSEKFRFNFDWEAQDDTSKDLNPLYNNTHEAAL 216
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
LFGRG RAG+DRREQ K AA ++ ++ +++R+ GV E E+ K +++AA++YD FD
Sbjct: 217 LFGRGLRAGVDRREQMKAAAAHQNDVMKKMRQSAGVSETKEDRQRDKDRKQAAEMYDDFD 276
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKG-SKIPRPMRNWAEGKLTPELLRAVERV 269
RV++HW+EK EEMTERDWRIFREDF+I+YKG + P+RNW E L L+ A+E++
Sbjct: 277 KRVEKHWTEKAREEMTERDWRIFREDFSIAYKGNTGSTLPIRNWQEAGLPQPLMDAIEKM 336
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
Y PSPIQMAAIPLGL+ RDVIG+AETGSGKTAAFV PML YI P ++EE AEGPY
Sbjct: 337 KYVKPSPIQMAAIPLGLKFRDVIGVAETGSGKTAAFVFPMLVYIMNQPKMTEEIAAEGPY 396
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
AVVMAPTRELAQQIEEET+K A + ++VS+VGGQSIE+QGF++R+GCE+VIATPGRL+
Sbjct: 397 AVVMAPTRELAQQIEEETMKLAQFTEFRMVSVVGGQSIEDQGFKLRKGCEIVIATPGRLL 456
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
DCLE+RYAVLNQCNYVVLDEADRMIDMGFEPQV GVLDAMPS+NLKPE EDEEL+E R+Y
Sbjct: 457 DCLEQRYAVLNQCNYVVLDEADRMIDMGFEPQVRGVLDAMPSTNLKPEQEDEELEENRVY 516
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL 509
RTTYMFSATMPPAVERLARKY+R PVV+ IG+AGKAT+ VV+ K+++K L+ L
Sbjct: 517 RTTYMFSATMPPAVERLARKYMRRPVVINIGSAGKATD---SEVVICKDNDKLRLLEDQL 573
Query: 510 DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLV 569
+GDK IVFVNTK + D+V+++LD L Y T LHGGK+Q+QRE L GFR +YNVLV
Sbjct: 574 SRVGDKRVIVFVNTKTHCDVVSRHLDHLSYHCTVLHGGKTQDQREAGLAGFREDKYNVLV 633
Query: 570 ATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDL 629
ATDVAGRGID+PDVA VINYDMP +IE YTHRIGRTGRAGKTG A TFLT DT+VFYDL
Sbjct: 634 ATDVAGRGIDVPDVAAVINYDMPHSIEQYTHRIGRTGRAGKTGYAVTFLTMSDTEVFYDL 693
Query: 630 KQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
K++L +S + VP +LA HEASK KPG++ DR PR++ V+++
Sbjct: 694 KRLLEESGANVPSQLAHHEASKVKPGSVQDR-PRKDQVVYSN 734
>gi|307111894|gb|EFN60128.1| hypothetical protein CHLNCDRAFT_56582 [Chlorella variabilis]
Length = 863
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/673 (60%), Positives = 500/673 (74%), Gaps = 29/673 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLL------------SQPQTHGRNSSD 61
KP+FLTK QR +LAL++R E+ A + R + +Q L GR+S +
Sbjct: 179 KPVFLTKEQRAKLALQKRAEEAAAARERLAEMRQGLVASGLGPTNANGGAAGPTGRDSRE 238
Query: 62 SRDRERERHRREREEEAKARERARLEKLAERERERELE-----------LIKEQYLGSKK 110
+RDR ER R E + ER + + +RE LIK+QYLG ++
Sbjct: 239 ARDRGYERRDDRRGEHDRRDERRDGRRDRRDDGDRERTKEERERQRELELIKQQYLGGER 298
Query: 111 PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAA 170
KK+V+K +E+ +F FDW+ EDTSRD+N LYQN HEA LLFGRGFRAG+DRREQKK AA
Sbjct: 299 AKKKVLKATERMKFVFDWDADEDTSRDLNPLYQNLHEANLLFGRGFRAGIDRREQKKTAA 358
Query: 171 KNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDW 230
++E E+ R++ GV E E+ +++ + AD Y+ DMRVD HWSEKK E MTERDW
Sbjct: 359 ESEAEILRRQRQQAGVRETAEDRERDRVRRDYADKYEGADMRVDSHWSEKKREHMTERDW 418
Query: 231 RIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRD 290
RIFREDF+ISYKG P+RNW EG L L +AVER GYK PSPIQMAAIPLGLQ RD
Sbjct: 419 RIFREDFSISYKGVNPALPIRNWDEGNLPKSLRKAVERAGYKKPSPIQMAAIPLGLQFRD 478
Query: 291 VIGIAETGSGKTAAFVLPMLTYISRLPPI--SEENEAEGPYAVVMAPTRELAQQIEEETV 348
VIGIAETGSGKTAAFVLPML YI + PP+ + + EAEGPY+VV+APTRELAQQIEEE
Sbjct: 479 VIGIAETGSGKTAAFVLPMLVYIEKQPPMLGNPDIEAEGPYSVVLAPTRELAQQIEEEAR 538
Query: 349 KFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLD 408
AHY +VVS+VGGQSIE+QG +R+GCE+V+ATPGRL+DC+ER YAVLNQCNYVVLD
Sbjct: 539 NLAHYTEFRVVSVVGGQSIEDQGVALRKGCEIVVATPGRLVDCIERSYAVLNQCNYVVLD 598
Query: 409 EADRMIDMGFEPQ---VVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
EADRMID+GFEPQ V+GVLDAMPSSNLKPENEDE L+ R+YRTTYMFSATMPPAVER
Sbjct: 599 EADRMIDLGFEPQASAVMGVLDAMPSSNLKPENEDEPLESNRVYRTTYMFSATMPPAVER 658
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTK 524
LARKYLR PVV+TIGTAGKAT+ I+Q V+M+KE+EK L++ L+ +G D+ IVF NTK
Sbjct: 659 LARKYLRRPVVITIGTAGKATDNITQRVIMVKENEKARSLEQELNAMGDDQRIIVFANTK 718
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
D VA+ L + YRVT LHGGKSQ+QRE S++GFR YNVLVATDVAGRGID+P+VA
Sbjct: 719 SQCDAVARQLGNMDYRVTMLHGGKSQDQREESIKGFREDVYNVLVATDVAGRGIDVPNVA 778
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
VINYDM IE YTHRIGRTGRAG+ G A TFLT D+++FYDLK+ L ++ + VP +L
Sbjct: 779 LVINYDMANTIEQYTHRIGRTGRAGRKGTAVTFLTLKDSELFYDLKKFLEENKAAVPSQL 838
Query: 645 AKHEASKFKPGTI 657
A+HEA++ KPGT+
Sbjct: 839 AQHEAARQKPGTV 851
>gi|116256765|sp|Q9FZ92.2|RH44_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 44
Length = 622
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 486/662 (73%), Gaps = 77/662 (11%)
Query: 11 NNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERH 70
N KP+FLTKA R++LAL+R Q++IA + RR Q +S+ + + + RD +RERH
Sbjct: 22 NLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQ---ISRSNSDNDDGNRPRDVKRERH 78
Query: 71 R-----REREEEAKARER---ARLEKLAERERERELELIKEQYLGSKKPKKRVI-KPSEK 121
R R RE + + RER AR+EKL +RE+E+ +KEQYLG+ KPKKRVI KPS+
Sbjct: 79 RSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKN 138
Query: 122 FRFSFDWENTEDT-SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI 180
FRF DWENTEDT S +MN LYQNPHEAQ LFGRG RAG+DRREQKKL + + E
Sbjct: 139 FRF--DWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKRE- 195
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
D+HWSEKKLEEM ERDWRIF+EDFNIS
Sbjct: 196 -------------------------------EEDKHWSEKKLEEMNERDWRIFKEDFNIS 224
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
Y+GSKIP PMRNW E IPLGL+QRDVIGI+ TGSG
Sbjct: 225 YRGSKIPHPMRNWEE-------------------------TIPLGLEQRDVIGISATGSG 259
Query: 301 KTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
KTAAFVLPML YISRLPP+ EEN+ EGPYA+VM PTRELA QIEEETVKF+ YLG K VS
Sbjct: 260 KTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVS 319
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
I G +SIE+Q ++ QGCE+VIATPGRL+DCLERRY VLNQCNY+VLDEADRMIDM FEP
Sbjct: 320 ITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEP 379
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
QV VLD MP SNLKPE EDEEL+EK+IYRTTYMFSATM +VERLARK+LRNPVVVTI
Sbjct: 380 QVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTI- 438
Query: 481 TAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLG- 538
G+ T+ I+Q V+M KES+KFSRL++L+D+LG DKTAIVFVNT+ D + KNL+K+G
Sbjct: 439 --GETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGR 496
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VINYDMP +++Y
Sbjct: 497 CRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLY 556
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIP 658
THRIGRTGRAGKTGVATTFLT D DVFY LKQ L + NS VPPELA+HEASKFKPGT P
Sbjct: 557 THRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFP 616
Query: 659 DR 660
DR
Sbjct: 617 DR 618
>gi|238478657|ref|NP_001154376.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
gi|332192807|gb|AEE30928.1| P-loop containing nucleoside triphosphate hydrolase-like protein
[Arabidopsis thaliana]
Length = 614
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 486/662 (73%), Gaps = 77/662 (11%)
Query: 11 NNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERH 70
N KP+FLTKA R++LAL+R Q++IA + RR Q +S+ + + + RD +RERH
Sbjct: 14 NLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQ---ISRSNSDNDDGNRPRDVKRERH 70
Query: 71 R-----REREEEAKARER---ARLEKLAERERERELELIKEQYLGSKKPKKRVI-KPSEK 121
R R RE + + RER AR+EKL +RE+E+ +KEQYLG+ KPKKRVI KPS+
Sbjct: 71 RSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKN 130
Query: 122 FRFSFDWENTEDT-SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI 180
FRF DWENTEDT S +MN LYQNPHEAQ LFGRG RAG+DRREQKKL + + E
Sbjct: 131 FRF--DWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKRE- 187
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
D+HWSEKKLEEM ERDWRIF+EDFNIS
Sbjct: 188 -------------------------------EEDKHWSEKKLEEMNERDWRIFKEDFNIS 216
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
Y+GSKIP PMRNW E IPLGL+QRDVIGI+ TGSG
Sbjct: 217 YRGSKIPHPMRNWEE-------------------------TIPLGLEQRDVIGISATGSG 251
Query: 301 KTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
KTAAFVLPML YISRLPP+ EEN+ EGPYA+VM PTRELA QIEEETVKF+ YLG K VS
Sbjct: 252 KTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVS 311
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
I G +SIE+Q ++ QGCE+VIATPGRL+DCLERRY VLNQCNY+VLDEADRMIDM FEP
Sbjct: 312 ITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEP 371
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
QV VLD MP SNLKPE EDEEL+EK+IYRTTYMFSATM +VERLARK+LRNPVVVTI
Sbjct: 372 QVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTI- 430
Query: 481 TAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLG- 538
G+ T+ I+Q V+M KES+KFSRL++L+D+LG DKTAIVFVNT+ D + KNL+K+G
Sbjct: 431 --GETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGR 488
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VINYDMP +++Y
Sbjct: 489 CRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLY 548
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIP 658
THRIGRTGRAGKTGVATTFLT D DVFY LKQ L + NS VPPELA+HEASKFKPGT P
Sbjct: 549 THRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFP 608
Query: 659 DR 660
DR
Sbjct: 609 DR 610
>gi|9795619|gb|AAF98437.1|AC021044_16 Similar to RNA helicases [Arabidopsis thaliana]
Length = 610
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 486/662 (73%), Gaps = 77/662 (11%)
Query: 11 NNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERH 70
N KP+FLTKA R++LAL+R Q++IA + RR Q +S+ + + + RD +RERH
Sbjct: 10 NLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQ---ISRSNSDNDDGNRPRDVKRERH 66
Query: 71 R-----REREEEAKARER---ARLEKLAERERERELELIKEQYLGSKKPKKRVI-KPSEK 121
R R RE + + RER AR+EKL +RE+E+ +KEQYLG+ KPKKRVI KPS+
Sbjct: 67 RSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKN 126
Query: 122 FRFSFDWENTEDT-SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI 180
FRF DWENTEDT S +MN LYQNPHEAQ LFGRG RAG+DRREQKKL + + E
Sbjct: 127 FRF--DWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKRE- 183
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
D+HWSEKKLEEM ERDWRIF+EDFNIS
Sbjct: 184 -------------------------------EEDKHWSEKKLEEMNERDWRIFKEDFNIS 212
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
Y+GSKIP PMRNW E IPLGL+QRDVIGI+ TGSG
Sbjct: 213 YRGSKIPHPMRNWEE-------------------------TIPLGLEQRDVIGISATGSG 247
Query: 301 KTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
KTAAFVLPML YISRLPP+ EEN+ EGPYA+VM PTRELA QIEEETVKF+ YLG K VS
Sbjct: 248 KTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVS 307
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
I G +SIE+Q ++ QGCE+VIATPGRL+DCLERRY VLNQCNY+VLDEADRMIDM FEP
Sbjct: 308 ITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEP 367
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
QV VLD MP SNLKPE EDEEL+EK+IYRTTYMFSATM +VERLARK+LRNPVVVTI
Sbjct: 368 QVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTI- 426
Query: 481 TAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLG- 538
G+ T+ I+Q V+M KES+KFSRL++L+D+LG DKTAIVFVNT+ D + KNL+K+G
Sbjct: 427 --GETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGR 484
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VINYDMP +++Y
Sbjct: 485 CRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLY 544
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIP 658
THRIGRTGRAGKTGVATTFLT D DVFY LKQ L + NS VPPELA+HEASKFKPGT P
Sbjct: 545 THRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFP 604
Query: 659 DR 660
DR
Sbjct: 605 DR 606
>gi|357128412|ref|XP_003565867.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Brachypodium distachyon]
Length = 675
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/681 (58%), Positives = 487/681 (71%), Gaps = 58/681 (8%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRER 74
P+FL + +R++LALERRQ +A Q RR + + +D RHR
Sbjct: 11 PVFLPREKRQRLALERRQAAVADQLRRGSIPRPSPPP-PPDWPSKPPRQDSSSSRHRSRD 69
Query: 75 EEEAKARERARLEKLAERERERELELIKEQYLGS----KKPKKRVIKPSEKFRFSFDWEN 130
++ R EK+A RE+ELE IKEQYLG KK R + + RF FDW++
Sbjct: 70 PYRDIGEKKDRAEKMA---REKELEAIKEQYLGGSSKDKKKPPRTMATKLRDRFRFDWDS 126
Query: 131 TEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKP 190
EDT+RD P LL+GRGF AG+DRREQKK AA +
Sbjct: 127 AEDTTRDDGTGAGAP----LLYGRGFLAGIDRREQKKAAAASASAAALH----------- 171
Query: 191 EEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKI---P 247
D D + RH + K L EMTERDWRI REDF+ISYKGS+ P
Sbjct: 172 ------------KDDLDGTRVEYRRHGTAKALSEMTERDWRILREDFDISYKGSRSAVPP 219
Query: 248 RPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVL 307
RPMR WAE L LLRAV GY P+PIQMAA+PLGL++RD+IG+A+TGSGKTAAFVL
Sbjct: 220 RPMRTWAESALGEPLLRAVAMAGYATPTPIQMAAVPLGLRRRDLIGVAQTGSGKTAAFVL 279
Query: 308 PMLTYISRL----PPI--------SEENEAEGPYAVVMAPTRELAQQIEEETVKFAH--- 352
PML YI L PP+ + ++ +GPYAVVMAPTRELAQQIE ET K A
Sbjct: 280 PMLAYIMNLMTSPPPMIMSRGEADDDVHDPQGPYAVVMAPTRELAQQIERETTKLAAAAC 339
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ IKVVS+VGGQ IEEQ FRIRQGCEV++ATPGRL+DCLERR+ VLN+C+YVVLDEADR
Sbjct: 340 HGSIKVVSVVGGQPIEEQAFRIRQGCEVIVATPGRLLDCLERRHLVLNRCSYVVLDEADR 399
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQV VLDAMP+SNLKPENE EE +K +YRTT+MFSATMP AVERLARKY R
Sbjct: 400 MVDMGFEPQVASVLDAMPTSNLKPENEAEE--QKNVYRTTHMFSATMPAAVERLARKYXR 457
Query: 473 NPVVVTIGTA--GKATELISQHVVMMKESEKFSRLQRLLDELGD-KTAIVFVNTKKNADM 529
NPVVVT+G + GK T L++Q+V+M+K+S+K RL+R+L +LGD TAIVF NTK + D
Sbjct: 458 NPVVVTVGGSARGKGTGLVTQNVIMVKDSDKLPRLKRILADLGDDNTAIVFCNTKLSVDG 517
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
AK+LD+ G+RVTTLHGGKSQ+QRE SL+GFR++R+NVLVATD+AGRGID+PDVAHVIN+
Sbjct: 518 CAKDLDRAGFRVTTLHGGKSQDQREASLDGFRSRRFNVLVATDIAGRGIDVPDVAHVINF 577
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
+MPG ++ YTHRIGRTGRAGK G+AT+FLT D+++F+DLKQML+QSNSPVPPELA+HEA
Sbjct: 578 EMPGAVDAYTHRIGRTGRAGKKGLATSFLTLRDSEIFFDLKQMLVQSNSPVPPELARHEA 637
Query: 650 SKFKPGTIPDRPPRRNDTVFA 670
S+FKPG++PDRPPRRNDTV+A
Sbjct: 638 SRFKPGSVPDRPPRRNDTVYA 658
>gi|302853426|ref|XP_002958228.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
gi|300256416|gb|EFJ40682.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
Length = 574
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/574 (63%), Positives = 445/574 (77%), Gaps = 4/574 (0%)
Query: 100 LIKEQYLGSKKPKKRVIK-PSEKFRFSFDWENTEDTSRDM--NALYQNPHEAQLLFGRGF 156
+IK+QYLG +K KKRV + R S W + + + N EA L+FGRG
Sbjct: 1 MIKQQYLGQEKIKKRVSRNGGMGSRCSCRWRRGRWSLKPIVTNTPLTPCSEAALMFGRGM 60
Query: 157 RAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRH 216
RAG+DRREQKK AA E E+ + R G+ E E + ++ AD YD FDMR+++H
Sbjct: 61 RAGIDRREQKKAAASLEAELLRKARSAAGLVETAETREHDRERKRLADQYDGFDMRIEKH 120
Query: 217 WSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSP 276
W+EK LEEMTERDWRIFREDFNI Y+G P+R W E L L++A++RVGYK PSP
Sbjct: 121 WTEKSLEEMTERDWRIFREDFNIGYRGVNTVLPIRKWEESGLPSLLIKAIDRVGYKKPSP 180
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPT 336
IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML+YI R PP++EENEA+GPYAVV+APT
Sbjct: 181 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYIMRQPPMTEENEADGPYAVVLAPT 240
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRY 396
RELAQQIEEET K A+Y ++ S+VGGQSIEEQG ++R+GCE+VIATPGRL+DC++R Y
Sbjct: 241 RELAQQIEEETHKLAYYTNYRIASVVGGQSIEEQGAKLRKGCEIVIATPGRLLDCIDRHY 300
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
AVLNQCNYVVLDEADRMID+GFEPQV+GVLDAMPSS LKP+ + L+ R YRTTYMFS
Sbjct: 301 AVLNQCNYVVLDEADRMIDLGFEPQVIGVLDAMPSSFLKPDEDGAVLEANRTYRTTYMFS 360
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
ATMPPAVERLA+KYLR PVVV IG+AGK T+ ++Q V ++KE+EK L++ ++ + +K
Sbjct: 361 ATMPPAVERLAKKYLRRPVVVVIGSAGKVTDNVTQRVFVVKENEKPRVLEQEMESVDEKR 420
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFVNT++ D V ++L++LGYR T LHGGK+Q+QRE ++GFR YN L+ATDVAGR
Sbjct: 421 VIVFVNTQRQCDNVHRHLEELGYRCTILHGGKTQDQREAGIKGFRDGTYNCLIATDVAGR 480
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
GID+PDVA VINYDMP NIE YTHRIGRTGRAGK GVA TFLT DT VFYDLK++L +S
Sbjct: 481 GIDVPDVALVINYDMPNNIENYTHRIGRTGRAGKKGVAVTFLTLGDTGVFYDLKKLLEES 540
Query: 637 NSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+ VPPELA+HEASK KPG+I + R++ TVFA
Sbjct: 541 KAAVPPELARHEASKLKPGSIEAK-SRKDQTVFA 573
>gi|302818333|ref|XP_002990840.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
gi|300141401|gb|EFJ08113.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
Length = 583
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/548 (63%), Positives = 424/548 (77%), Gaps = 30/548 (5%)
Query: 107 GSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQK 166
GSKK K+ ++K R FDWENTEDTS+DM + QLLFGRGF AGMDRREQK
Sbjct: 65 GSKKAKRVIVKQ----RGKFDWENTEDTSQDMIPICH----GQLLFGRGFYAGMDRREQK 116
Query: 167 KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD-MRVDRHWSEKKLEEM 225
K +AK ++E + +I K LK YD FD M VDRHWSEK++ EM
Sbjct: 117 KQSAKIDRESKGQIEPKS-------------LKSS----YDPFDDMPVDRHWSEKEIHEM 159
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
T RDWRIFRED+NISYKGS+ P P RNW E + PE+LRAV+ GYK P+PIQMA+IPLG
Sbjct: 160 TSRDWRIFREDYNISYKGSRFPNPARNWEESGICPEILRAVQEAGYKKPTPIQMASIPLG 219
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
LQQRDVIGIA TGSGKTAAFV+PML Y+SRLP ++ E EGPYA+VMAPT ELAQQI+E
Sbjct: 220 LQQRDVIGIAGTGSGKTAAFVIPMLMYVSRLPKMTLERAIEGPYALVMAPTTELAQQIQE 279
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
ETVK A Y+ I V+S+V G++I Q ++ QGCE+VIATPGRL+ CLE+ YAVL+QCNYV
Sbjct: 280 ETVKLAKYMDINVLSLVAGEAIGGQSSKLLQGCEIVIATPGRLLHCLEQGYAVLHQCNYV 339
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDE DRMI +GFE QV+ L+AMPSSN+KPE+ED EL E RIYRTTYMFSATMPPAVER
Sbjct: 340 VLDEGDRMIALGFEEQVIDALEAMPSSNMKPESEDVEL-EDRIYRTTYMFSATMPPAVER 398
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LA+KYLRNPVVVTI K ISQ V+M+ E EK RL+RLLDELG+ + IVFVNTKK
Sbjct: 399 LAKKYLRNPVVVTIEEMSKR---ISQKVIMVDEEEKPKRLRRLLDELGEMSTIVFVNTKK 455
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD V+K L +G +V T+HGGK+Q++R+ + + FR+KR + L+ATDV GRGID+PDV H
Sbjct: 456 QADKVSKQLHDMGIKVATIHGGKTQQKRQTNFQDFRSKRRSCLIATDVVGRGIDVPDVGH 515
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
++NYDMP +EMY HRIGRTGRAGK+G ATTFLT +D++VFYDLKQ+L+++ +PVPPELA
Sbjct: 516 IVNYDMPSTVEMYIHRIGRTGRAGKSGAATTFLTLNDSEVFYDLKQLLVRTKNPVPPELA 575
Query: 646 KHEASKFK 653
+HEA+K K
Sbjct: 576 RHEAAKVK 583
>gi|303271399|ref|XP_003055061.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463035|gb|EEH60313.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 733
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/577 (59%), Positives = 429/577 (74%), Gaps = 11/577 (1%)
Query: 89 LAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA 148
L ER+RE+ELE IK Y+G KK KK+V KPS+KF+F FDWE+ EDTSRD+N LY ++A
Sbjct: 132 LQERDREKELESIKNMYMGQKKEKKKVAKPSDKFKFKFDWESKEDTSRDLNELYDRTYDA 191
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD-LYD 207
L FGRG RAG+DRR QKK + ++ + + R G E + KE D Y+
Sbjct: 192 PLAFGRGLRAGVDRRVQKKENSAHQMSLISKSRSDHGTAMSARERREAEDKERRDDEAYE 251
Query: 208 TFDMRV-DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE-LLRA 265
+ + HWS+KKLE+M ERDWRIFREDF+I+ KG ++P PMR W E L PE +LRA
Sbjct: 252 RAERKTQSEHWSDKKLEDMNERDWRIFREDFSITTKGGRLPMPMRCWEETSLLPEKILRA 311
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+++VGY PSPIQMA+IP+GL +RDVIGIAETGSGKT AFV+PML YI LP +++E A
Sbjct: 312 IQKVGYAKPSPIQMASIPIGLLKRDVIGIAETGSGKTCAFVVPMLAYIMELPVMTDEVAA 371
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
GPYA+VMAPTRELAQQIEEET KFAH+L +V S+VGGQSIE+QGF++R+GCE+VI TP
Sbjct: 372 HGPYALVMAPTRELAQQIEEETTKFAHFLNYRVTSVVGGQSIEDQGFKLRRGCEIVIGTP 431
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GR+ID LERRY VL QCNY+VLDEADRMIDMGFEPQV+ V+D+M + NLKP +E E +D
Sbjct: 432 GRVIDVLERRYTVLQQCNYIVLDEADRMIDMGFEPQVMSVMDSMSADNLKPIDEAETIDA 491
Query: 446 KRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
+ YR TYMFSATMPP+VERLARKYLRNP VV IG+AGK ++LI Q V+ M
Sbjct: 492 GGLEAGAAGTRYRMTYMFSATMPPSVERLARKYLRNPAVVNIGSAGKTSDLIKQVVMWMT 551
Query: 498 ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
K ++L+ +L D AIVFVNTK+ D V K GY V ++HGGKSQ+QRE SL
Sbjct: 552 RGAKETQLELVLSRYPDTQAIVFVNTKRAVDHVQSLCVKQGYSVASIHGGKSQDQREDSL 611
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
+GF+ Y++LVATDVAGRGID+ D+ V+NY+MP IE YTHRIGRTGRAG+ G A +F
Sbjct: 612 KGFKAGEYDILVATDVAGRGIDVKDIDLVVNYEMPLVIENYTHRIGRTGRAGRQGTAVSF 671
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKP 654
+T DTDV YDLK++L S + VPPELA+HEA+K KP
Sbjct: 672 ITSEDTDVMYDLKELLTNSGNAVPPELARHEAAKVKP 708
>gi|302785159|ref|XP_002974351.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
gi|300157949|gb|EFJ24573.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
Length = 523
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/542 (61%), Positives = 410/542 (75%), Gaps = 44/542 (8%)
Query: 107 GSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQK 166
GSKK K+ ++K R FDWENTEDTS+DM + QLLFGRGF AGMDRREQK
Sbjct: 10 GSKKAKRVIVKQ----RGKFDWENTEDTSQDMIPICH----GQLLFGRGFYAGMDRREQK 61
Query: 167 KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMT 226
K +AK ++E + +I K HWSEK++ EMT
Sbjct: 62 KQSAKIDRESKGQIEPK--------------------------------HWSEKEIHEMT 89
Query: 227 ERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGL 286
RDWRIFRED+NISYKGS+ P P RNW E + PE+LRAV+ GYK P+PIQMA+IPLGL
Sbjct: 90 SRDWRIFREDYNISYKGSRFPNPARNWEESGICPEILRAVQEAGYKKPTPIQMASIPLGL 149
Query: 287 QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEE 346
QQRDVIGIA TGSGKTAAFV+PML Y+SRLP ++ E EGPYA+VMAPT ELAQQI+EE
Sbjct: 150 QQRDVIGIAGTGSGKTAAFVIPMLMYVSRLPKMTLERAIEGPYALVMAPTTELAQQIQEE 209
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
TVK A Y+ I V+S+V G++I Q ++ QGCE+VIATPGRL+ CLE+ YAVL+QCNYVV
Sbjct: 210 TVKLAKYMDINVLSLVAGEAIGGQSSKLLQGCEIVIATPGRLLHCLEQGYAVLHQCNYVV 269
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDE DRMI +GFE QV+ L+AMPSSN+KPE+ED EL E RIYRTTYMFSATMPPAVERL
Sbjct: 270 LDEGDRMIALGFEEQVIDALEAMPSSNMKPESEDVEL-EDRIYRTTYMFSATMPPAVERL 328
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
A+KYLRNPVVVTI K ISQ V+M+ E EK RL+RLLDELG+ + IVFVNTKK
Sbjct: 329 AKKYLRNPVVVTIEEMSKR---ISQKVMMVDEEEKPKRLRRLLDELGEMSTIVFVNTKKQ 385
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD V+K L +G +V T+HGGK+Q++R+ + + FR+KR + L+ATDV GRGID+PDV H+
Sbjct: 386 ADKVSKQLHDMGIKVATIHGGKTQQKRQTNFQDFRSKRRSCLIATDVVGRGIDVPDVGHI 445
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
+NYDMP +EMY HRIGRTGRAGK+G ATTFLT +D++VFYDLKQ+L+++ +PVPPELA+
Sbjct: 446 VNYDMPSTVEMYIHRIGRTGRAGKSGAATTFLTLNDSEVFYDLKQLLVRTKNPVPPELAR 505
Query: 647 HE 648
HE
Sbjct: 506 HE 507
>gi|255080620|ref|XP_002503883.1| predicted protein [Micromonas sp. RCC299]
gi|226519150|gb|ACO65141.1| predicted protein [Micromonas sp. RCC299]
Length = 754
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/572 (58%), Positives = 427/572 (74%), Gaps = 9/572 (1%)
Query: 92 RERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
+ RE EL +KE Y+G++K KK+V+K S++F+F FDWE+ EDTSRD+N LY H+A LL
Sbjct: 161 KAREAELTQLKEAYMGAEKVKKKVVKASDRFKFKFDWESAEDTSRDLNPLYDKKHDAALL 220
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD-LYDTFD 210
FGRG RAG+DRREQK A ++ + R G E + D Y+ +
Sbjct: 221 FGRGLRAGVDRREQKTQNAAHQMNLVSRSRADAGDAMTKAEVRRWDSRRRDEDEAYERAE 280
Query: 211 MRV-DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
R+ +HWS+K L+EM ERDWRIFREDFNI+ KG ++P PMR+W E + ++ RA+++V
Sbjct: 281 RRMASKHWSDKALDEMNERDWRIFREDFNITTKGGRLPLPMRSWEESTMPEQVKRAIQKV 340
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
GY PSPIQMA+IP+GL +RDVIGIAETGSGKT AFV+PML YI LPP+++E A GPY
Sbjct: 341 GYAKPSPIQMASIPIGLLKRDVIGIAETGSGKTCAFVVPMLAYIQELPPMTDEVAALGPY 400
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A+VMAPTRELAQQIEEETVKFA ++ +V S+VGGQSIEEQGF++R+GCE+VI TPGR+I
Sbjct: 401 ALVMAPTRELAQQIEEETVKFAQFMNYRVASVVGGQSIEEQGFKLRRGCEIVIGTPGRII 460
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI- 448
D LERRY VL QCNY+VLDEADRMIDMGFEPQV+ V+D+M + +LKPE E E++DE+ +
Sbjct: 461 DVLERRYTVLQQCNYIVLDEADRMIDMGFEPQVISVMDSMSAESLKPEEEAEKIDEQGLE 520
Query: 449 ------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
YR TYMFSATMPP+VE+LARKY+RNP VVTIG+AGK ++LI Q V ++K
Sbjct: 521 ASLGTKYRMTYMFSATMPPSVEKLARKYMRNPAVVTIGSAGKTSDLIKQIVQWTTSNQKP 580
Query: 503 SRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
++L+ +L + D AI+FVNTK+ D V+ K+GY V +HGGKSQ+QRE SL GF+
Sbjct: 581 AQLELVLSQYPDTQAIIFVNTKRVVDHVSNLCFKMGYSVGAIHGGKSQDQREESLRGFKQ 640
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
Y++LVATDVAGRGID+ + V+NY+MP IE YTHRIGRTGRAG+ G A +FLT D
Sbjct: 641 GEYDILVATDVAGRGIDVKGIDLVVNYEMPLVIENYTHRIGRTGRAGRQGTAVSFLTSED 700
Query: 623 TDVFYDLKQMLIQSNSPVPPELAKHEASKFKP 654
TDV Y+LK++L S + VP ELA H+A+K KP
Sbjct: 701 TDVMYELKELLTNSGNHVPGELANHQAAKVKP 732
>gi|412992467|emb|CCO18447.1| predicted protein [Bathycoccus prasinos]
Length = 818
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/668 (51%), Positives = 457/668 (68%), Gaps = 35/668 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +RE+LA+ER +E KRR+E T ++S S R R+
Sbjct: 137 KPTFLTKKEREKLAMERLKE-----KRREEGGGGDGGTVATAHHHASSSSRFARATSARD 191
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEK-----FRFSFDW 128
E R+++ + +ERER+ +LE ++QY G + +++ K +K ++F FDW
Sbjct: 192 VAERQYQRDKS---EQSERERQEQLEQFRKQYAGVRDETEKMKKMKQKAERAKYKFQFDW 248
Query: 129 ENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMRE--------EI 180
+DTSRD N LY H+ +LLFGRG AG+D R Q + K E + +
Sbjct: 249 SKEDDTSRDANPLYDAKHDVKLLFGRGTIAGVDARMQMEQNHKFENSVGKRRGGNTVNNN 308
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDT-FDMRVDR-HWSEKKLEEMTERDWRIFREDFN 238
R + E A + +A + YD +D + + HWS K L +M ERDWRIFREDFN
Sbjct: 309 RSRSYDAAGDENARRIDKHSKALEKYDNQYDKKKETTHWSSKPLAQMNERDWRIFREDFN 368
Query: 239 ISYKGSKIPRPMRNWAEGKLTP-ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I++KG K+P PMR W+E +L P E+LRA+E+VGY PSPIQMA+IP+GL +RDVIG+AET
Sbjct: 369 ITFKGGKVPNPMRAWSENELLPQEILRAIEKVGYTKPSPIQMASIPIGLLKRDVIGVAET 428
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AFV+PML +I LP +++E A+GPYA+VMAPTRELAQQIEEET+KFAH+LG +
Sbjct: 429 GSGKTCAFVVPMLAHIMGLPKMTDEVAADGPYALVMAPTRELAQQIEEETLKFAHFLGYR 488
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMG 417
V +VGGQSIE+QG ++R+G E+V+ TPGR+ID +E+RY VLNQCNY+VLDEADRMIDMG
Sbjct: 489 VACVVGGQSIEDQGVQLRKGVEIVVGTPGRIIDVIEKRYTVLNQCNYIVLDEADRMIDMG 548
Query: 418 FEPQVVGVLDAMPSSNLKPENEDEELDEKRI-----------YRTTYMFSATMPPAVERL 466
FEPQV V++AMPSSNLKP + EELD K I YRTTYMFSATMPP+VERL
Sbjct: 549 FEPQVTQVMEAMPSSNLKPIDMAEELDNKAIDNKQSIETSARYRTTYMFSATMPPSVERL 608
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR YLRNP VVTIG+AGK ++LI Q V+ + SEK L+++L + AIVFVNTK+
Sbjct: 609 ARTYLRNPAVVTIGSAGKTSDLIKQTVIWVNRSEKERTLEQILSQHTQTQAIVFVNTKRG 668
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
D +GY ++HGGK Q+ RE +L GF+ +++LVATDVAGRGID+ + V
Sbjct: 669 VDSCVTACHSMGYSCGSIHGGKGQDAREAALTGFKRGDFDILVATDVAGRGIDVKGIDLV 728
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
+NY++P +IE YTHRIGRTGRAG+ G A +F+T D D+ YDL+Q+LI+SN+ VPPEL +
Sbjct: 729 VNYELPASIENYTHRIGRTGRAGRKGTAVSFITSEDQDIMYDLRQLLIESNNEVPPELER 788
Query: 647 HEASKFKP 654
+A+K KP
Sbjct: 789 QKAAKVKP 796
>gi|168002555|ref|XP_001753979.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694955|gb|EDQ81301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/505 (69%), Positives = 398/505 (78%), Gaps = 65/505 (12%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRE------- 66
+P+FLTKAQR ++AL+RR+E+ A+Q +R L QP+ R D E
Sbjct: 1 QPVFLTKAQRVEIALKRRREEAAEQLKRY-----FLYQPREKSRERGRDHDHEIRQAREQ 55
Query: 67 -----RERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEK 121
R REREEE K RE+ RL+K A+RE E+ELELIKEQYLG+KK KKRV+KPSEK
Sbjct: 56 ERDRDRREREREREEEIKQREKERLQKQAQREHEKELELIKEQYLGAKKFKKRVVKPSEK 115
Query: 122 FRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIR 181
FRFSFDWE+TEDTSRDMN +YQNPHEAQLLFGRGFRAGMDRREQKK
Sbjct: 116 FRFSFDWESTEDTSRDMNPIYQNPHEAQLLFGRGFRAGMDRREQKK-------------- 161
Query: 182 KKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+ A+LYD FDMRVDRHWSEKK+E+MTERDWRIFRED+NIS
Sbjct: 162 -------------------DVANLYDAFDMRVDRHWSEKKVEDMTERDWRIFREDYNISN 202
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KGS+IPRPMRNWAE VGY PSPIQMAAIP+GLQQRDVIGIAETGSGK
Sbjct: 203 KGSRIPRPMRNWAE-------------VGYTKPSPIQMAAIPIGLQQRDVIGIAETGSGK 249
Query: 302 TAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
TAAFVLPMLTYIS+LPP++++ EAEGPYAVVMAPTRELAQQIE+ETVKFAH+L I+VVSI
Sbjct: 250 TAAFVLPMLTYISKLPPMTDDIEAEGPYAVVMAPTRELAQQIEDETVKFAHFLDIRVVSI 309
Query: 362 VGGQSIEEQGFRIRQ--GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
VGGQSIEEQGF++RQ GCE+VIA PGRL+DCLERRYAVLNQCNYVVLDEADRMID+GFE
Sbjct: 310 VGGQSIEEQGFKLRQAGGCEIVIAFPGRLLDCLERRYAVLNQCNYVVLDEADRMIDLGFE 369
Query: 420 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
PQV+GVLDAMPSSNLKPENED ELD ++IYRTTYMFSAT+P A+ERLARKYLRNPVVVTI
Sbjct: 370 PQVMGVLDAMPSSNLKPENEDAELDTQKIYRTTYMFSATVPLALERLARKYLRNPVVVTI 429
Query: 480 GTAGKATELISQHVVMMKESEKFSR 504
G AGKAT+LI+QHV+M+KE EK +
Sbjct: 430 GMAGKATDLITQHVMMVKECEKLEK 454
>gi|156545118|ref|XP_001602070.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Nasonia
vitripennis]
Length = 821
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/667 (52%), Positives = 468/667 (70%), Gaps = 28/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R LAL++RQE++A +++QE+Q++LL PQT G +SS S +RE + R
Sbjct: 173 KPKFLTKQERAALALQKRQEEVAAMRKQQEEQRKLL--PQTEG-SSSSSNNREWDDRDRR 229
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
RE + R+R E + ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ TED
Sbjct: 230 RENQ-----RSRDEDVKDKDKEKEVEAIKERYLGLIKKKRRVRRLNDR-KFVFDWDTTED 283
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N +Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R+ E +E+ +
Sbjct: 284 TSVDYNNIYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEK-RRTEAEKEQEKVR 341
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
++E +D DRHWSEK ++EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 342 LKKVKRKEEKQKWD------DRHWSEKAIDEMTERDWRIFREDYNITIKGGRIPDPIRSW 395
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 396 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 455
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I +E + GP+++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 456 TSLPKIERTDEVDQGPWSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 515
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 516 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 575
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMP AVERLAR YLR P VV IG+ GK
Sbjct: 576 NLKPDNEDAENEEKLLANYNSRKKYRQTVMFTATMPAAVERLARTYLRRPAVVYIGSIGK 635
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+KLGY TL
Sbjct: 636 PTERTEQIVHIMGEADKRRKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTL 695
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L + ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 696 HGGKGQEQREYALASLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 755
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK GVA +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 756 TGRAGKAGVAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPEAQHKPGTVVTK-KR 814
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 815 REEKIFA 821
>gi|156391217|ref|XP_001635665.1| predicted protein [Nematostella vectensis]
gi|156222761|gb|EDO43602.1| predicted protein [Nematostella vectensis]
Length = 777
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/673 (52%), Positives = 475/673 (70%), Gaps = 31/673 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ----LLSQPQTHGR---NSSDSRDRE 66
KP FLTK QR A+++RQ Q+ +Q+++ E++++ L + Q H + N + R+R
Sbjct: 120 KPTFLTKEQRAAEAIKKRQAQVEEQRKKMEEERKKRETFLREAQ-HSKEDDNERERRERR 178
Query: 67 RERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSF 126
R + E++ E R++ R +KL +E+EL IKE+YLG K K+++ + +++ +F F
Sbjct: 179 ERREKMEQDGEDGKRDKVRQDKL----QEKELGAIKERYLGLNKKKRKIRRLTDR-KFVF 233
Query: 127 DWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGV 186
DW+ EDTS D N +Y+ H+ QL FGRG G+D + QKK A K EM E K+ +
Sbjct: 234 DWDTGEDTSNDYNPIYKERHQVQL-FGRGHIGGIDIKIQKKEAGKFYAEMME---KRRTI 289
Query: 187 EEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKI 246
EEK +E LK KE+ + FD DRHW++K LEEMTERDWRIFREDFNIS KG +I
Sbjct: 290 EEKEQEGNRLK-KEKDKERKVAFD---DRHWTKKNLEEMTERDWRIFREDFNISTKGGRI 345
Query: 247 PRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFV 306
P P+R W E ++ +L V+++GYK+P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 346 PFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFA 405
Query: 307 LPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQ 365
+P+L +I LP I +N+A+ GPYA+++APTRELAQQIEEE +KF LGI+ VS++GG
Sbjct: 406 IPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGL 465
Query: 366 SIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
S E+QGF++R G E+VIATPGRLID LE RY VLN+C+Y+V+DEADRMIDMGFEP+V +
Sbjct: 466 SREDQGFQLRLGVEIVIATPGRLIDVLENRYLVLNRCSYIVMDEADRMIDMGFEPEVQKI 525
Query: 426 LDAMPSSNLKPENEDEELDE-------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
L+ +P SN+KP++ED E E K YR T MF+ATMPP VERLA+ YLR P VV
Sbjct: 526 LEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERLAKNYLRRPAVVY 585
Query: 479 IGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLG 538
IG+ GK E + Q V ++ E +K +L LL++ + I+FVN KK AD++AK+L+K+G
Sbjct: 586 IGSVGKPVERVEQRVYLVNEQQKRKKLLELLNKDLEPPIIIFVNQKKGADVLAKSLEKMG 645
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
+R TTLHGG++QEQRE +L + ++LVATDVAGRGIDI DV+HVINYDM IE Y
Sbjct: 646 FRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDY 705
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTI 657
THRIGRTGRAGKTG+A +FLT D+ VFYDLKQ+L+ S S P ELA H ++ KPGT+
Sbjct: 706 THRIGRTGRAGKTGIAVSFLTQSDSGVFYDLKQLLLSSPVSSCPSELANHPEAQHKPGTV 765
Query: 658 PDRPPRRNDTVFA 670
+ R+ +T+F
Sbjct: 766 LTK-KRKEETIFV 777
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 471/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 141 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 200
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 201 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 255
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 256 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 311
Query: 188 EKPEEAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 312 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 365
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 366 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 425
Query: 306 VLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 426 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 485
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 486 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 545
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 546 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 605
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 606 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 665
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 666 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 725
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 726 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 785
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 786 GTILTK-KRREETIFA 800
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 471/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 471/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREADALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 159 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 218
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 219 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 273
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 274 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 329
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 330 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 383
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 443
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 444 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 503
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 504 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 563
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 564 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 623
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 624 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 683
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 684 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 743
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 744 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 803
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 804 GTILTK-KRREETIFA 818
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPVRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 469/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ ++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQREVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 159 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 218
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 219 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 273
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 274 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 329
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 330 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 383
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 384 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 443
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 444 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 503
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 504 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 563
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 564 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 623
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 624 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 683
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 684 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 743
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 744 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 803
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 804 GTILTK-KRREETIFA 818
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRVLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/680 (51%), Positives = 467/680 (68%), Gaps = 44/680 (6%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRR-----------QEQQQQLLSQPQTHGRNSSDSR 63
P FL+KA+RE +AL+RRQ+++ +++R QE +++L PQ R R
Sbjct: 161 PKFLSKAEREAVALKRRQQEVEERQRLLEDERKKRKHFQEMGRKMLEDPQERERRERRER 220
Query: 64 DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR 123
+ E K RE E+++ +EL IKE+YLG K ++R +++ +
Sbjct: 221 MERETNGNEDEEGRQKIRE--------EKDKSKELHAIKERYLGGVKKRRRTRHLNDR-K 271
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
F F+W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+
Sbjct: 272 FVFEWDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KR 327
Query: 184 EGVEEKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+EEK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 328 RTLEEKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITT 381
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KG KIP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441
Query: 302 TAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 501
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 502 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 561
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ MP +N KP+ ++ E +K + YR T MF+ATMPPAVERLAR YL
Sbjct: 562 DVQKILEHMPVTNQKPDTDEAEDPDKMMANFESGKHKYRQTVMFTATMPPAVERLARSYL 621
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++A
Sbjct: 622 RRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLA 681
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM
Sbjct: 682 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDM 741
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE Y HRIGRTGRAGK+GVA +F+T D+ VFYDLKQ +++S S PPELA H +
Sbjct: 742 AKNIEDYIHRIGRTGRAGKSGVAISFVTKEDSAVFYDLKQAILESPVSSCPPELANHPDA 801
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 802 QHKPGTILTK-KRREETIFA 820
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 160 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 219
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 220 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 274
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 275 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 330
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 331 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 384
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 445 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 504
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 505 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 564
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 565 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 624
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 625 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 684
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 685 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 744
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 745 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 804
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 805 GTILTK-KRREETIFA 819
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 160 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 219
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 220 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 274
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 275 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 330
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 331 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 384
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 445 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 504
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 505 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 564
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 565 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 624
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 625 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 684
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 685 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 744
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 745 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 804
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 805 GTILTK-KRREETIFA 819
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 160 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 219
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 220 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 274
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 275 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 330
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 331 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 384
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 445 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 504
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 505 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 564
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 565 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 624
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 625 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 684
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 685 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 744
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 745 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 804
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 805 GTILTK-KRREETIFA 819
>gi|383854652|ref|XP_003702834.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Megachile
rotundata]
Length = 784
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/667 (52%), Positives = 457/667 (68%), Gaps = 31/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK QR LAL++RQE++ +++QE+ ++ + G++ R +R
Sbjct: 139 KPKFLTKEQRAALALQKRQEEVEAMRKQQEEARKSFFHTENTGKDREWDDRDRRREGQRA 198
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
REEE K ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 199 REEEIK-----------DKDKEKEVEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDTSED 246
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N++Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 247 TSVDYNSIYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 305
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 306 KKVKRKEEKQK-WD------DRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW 358
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 359 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 418
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 419 TSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 478
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 479 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 538
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P VV IG+ GK
Sbjct: 539 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGK 598
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+KLGY TL
Sbjct: 599 PTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTL 658
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 659 HGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 718
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 719 TGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KR 777
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 778 REEKIFA 784
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AG+ E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGRPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 160 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 219
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 220 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 274
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 275 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 330
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 331 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 384
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 445 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 504
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 505 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 564
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 565 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 624
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 625 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 684
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 685 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 744
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 745 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 804
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 805 GTILTK-KRREETIFA 819
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/675 (51%), Positives = 469/675 (69%), Gaps = 36/675 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 160 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 219
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 220 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 274
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 275 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 330
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 331 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 384
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 445 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 504
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 505 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 564
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 565 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 624
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 625 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 684
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 685 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 744
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 745 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 804
Query: 655 GTIPDRPPRRNDTVF 669
GTI + RR +T+F
Sbjct: 805 GTILTK-KRREETIF 818
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 139 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 198
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 199 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 253
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 254 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 309
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 310 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 363
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 364 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 423
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 424 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 483
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 484 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 543
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 544 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 603
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 604 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 663
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 664 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 723
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 724 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 783
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 784 GTILTK-KRREETIFA 798
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 471/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 160 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 219
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 220 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 274
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 275 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 330
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 331 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 384
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 306 VLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 445 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 504
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 505 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 564
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 565 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 624
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 625 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 684
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 685 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 744
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 745 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 804
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 805 GTILTK-KRREETIFA 819
>gi|332023103|gb|EGI63364.1| Putative ATP-dependent RNA helicase DDX23 [Acromyrmex echinatior]
Length = 789
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/667 (52%), Positives = 466/667 (69%), Gaps = 30/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FL+K +R LALE+RQ+++ +++QE++++LLS H N+S +ER +
Sbjct: 143 KPKFLSKEERAALALEKRQQEVEAIRKQQEEERKLLS----HSDNTS------KEREWDD 192
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
R+ + +R+R E + ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 193 RDSRRRESQRSRDEDIKDKDKEKEVEAIKERYLGLIKKKRRVRRLNDR-KFVFDWDTSED 251
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N++Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 252 TSVDYNSIYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 310
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 311 KKVKRKEEKQK-WD------DRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSW 363
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 364 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 423
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 424 TSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 483
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 484 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 543
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P VV IG+ GK
Sbjct: 544 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGK 603
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+KLGY TL
Sbjct: 604 PTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTL 663
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 664 HGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 723
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 724 TGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KR 782
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 783 REEKIFA 789
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/680 (51%), Positives = 467/680 (68%), Gaps = 44/680 (6%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ-----------LLSQPQTHGRNSSDSR 63
P FL+KA+RE AL+RRQ+++ ++++ E++++ +L PQ R R
Sbjct: 159 PKFLSKAEREAEALKRRQQEVEERQKLIEEERKKRKHFQDLGRKMLEDPQERERRERRER 218
Query: 64 DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR 123
+ E K RE E+++ +EL IKE+YLG K ++R +++ +
Sbjct: 219 MERETNGNEDEEGRQKIRE--------EKDKSKELHAIKERYLGGVKKRRRTRHLNDR-K 269
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
F F+W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+
Sbjct: 270 FVFEWDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KR 325
Query: 184 EGVEEKPEEAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+EEK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 326 RTLEEKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITT 379
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KG KIP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGK
Sbjct: 380 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 439
Query: 302 TAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+
Sbjct: 440 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 499
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 500 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 559
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YL
Sbjct: 560 DVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYL 619
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++A
Sbjct: 620 RRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLA 679
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM
Sbjct: 680 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDM 739
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H +
Sbjct: 740 AKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDA 799
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 800 QHKPGTILTK-KRREETIFA 818
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/680 (51%), Positives = 467/680 (68%), Gaps = 44/680 (6%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ-----------LLSQPQTHGRNSSDSR 63
P FL+KA+RE AL+RRQ+++ ++++ E++++ +L PQ R R
Sbjct: 159 PKFLSKAEREAEALKRRQQEVEERQKLIEEERKKRKHFQDLGRKMLEDPQERERRERRER 218
Query: 64 DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR 123
+ E K RE E+++ +EL IKE+YLG K ++R +++ +
Sbjct: 219 MERETNGNEDEEGRQKIRE--------EKDKSKELHAIKERYLGGVKKRRRTRHLNDR-K 269
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
F F+W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+
Sbjct: 270 FVFEWDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KR 325
Query: 184 EGVEEKPEEAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+EEK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 326 RTLEEKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITT 379
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KG KIP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGK
Sbjct: 380 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 439
Query: 302 TAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+
Sbjct: 440 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 499
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 500 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 559
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YL
Sbjct: 560 DVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYL 619
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++A
Sbjct: 620 RRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLA 679
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM
Sbjct: 680 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDM 739
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H +
Sbjct: 740 AKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDA 799
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 800 QHKPGTILTK-KRREETIFA 818
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +E+TS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEETSIDYNPLYKERHQVQLL-GRGFIAGIDFKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/676 (51%), Positives = 469/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ ++ ++++ E++++ Q Q GR RER
Sbjct: 161 PRFLSKAEREAEALKRRQLEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/680 (51%), Positives = 467/680 (68%), Gaps = 44/680 (6%)
Query: 15 PLFLTKAQREQLALERRQEQ------IAQQKRRQEQQQQ-----LLSQPQTHGRNSSDSR 63
P FL+KA+RE AL+RRQ++ + +++R++ +Q Q +L PQ R R
Sbjct: 161 PKFLSKAEREAEALKRRQQEGEGRQRVLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 64 DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR 123
+ E K RE E+++ +EL IKE+YLG K ++R +++ +
Sbjct: 221 MERETNGNEDEEGRQKIRE--------EKDKSKELHAIKERYLGGIKKRRRTRHLNDR-K 271
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
F F+W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+
Sbjct: 272 FVFEWDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KR 327
Query: 184 EGVEEKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+EEK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 328 RTLEEKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITT 381
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KG KIP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441
Query: 302 TAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 501
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 502 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 561
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YL
Sbjct: 562 DVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYL 621
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++A
Sbjct: 622 RRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLA 681
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM
Sbjct: 682 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDM 741
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H +
Sbjct: 742 AKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDA 801
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 802 QHKPGTILTK-KRREETIFA 820
>gi|197100123|ref|NP_001125347.1| probable ATP-dependent RNA helicase DDX23 [Pongo abelii]
gi|67460452|sp|Q5RC67.1|DDX23_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=DEAD box protein 23
gi|55727779|emb|CAH90640.1| hypothetical protein [Pongo abelii]
Length = 820
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/676 (51%), Positives = 468/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A + K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARFRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY V ++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|350424960|ref|XP_003493968.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
impatiens]
Length = 784
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/667 (52%), Positives = 456/667 (68%), Gaps = 32/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R LAL++RQE++ +++QE ++ D RDR R+ +R
Sbjct: 140 KPKFLTKEERTALALQKRQEEVEAIRKQQEDIRKSFHSENVGKDKEWDERDRRRD-GQRT 198
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
RE+E K ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 199 REDEIK-----------DKDKEKEVEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDTSED 246
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N +Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 247 TSVDYNNIYKERHQVQF-FGRGNFAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 305
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 306 KKVKRKEEKQK-WD------DRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW 358
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 359 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 418
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 419 TSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 478
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 479 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 538
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P VV IG+ GK
Sbjct: 539 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGK 598
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+KLGY TL
Sbjct: 599 PTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTL 658
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 659 HGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 718
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 719 TGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KR 777
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 778 REEKIFA 784
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/682 (51%), Positives = 466/682 (68%), Gaps = 46/682 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQ------------QLLSQPQTHGRNSSD 61
KP FL+K++RE A++RR EQ+A+++RRQ ++ ++L PQ R
Sbjct: 147 KPKFLSKSEREAEAIKRR-EQVAEERRRQLDEERKKRRVFQDIGRKMLEDPQERERRERR 205
Query: 62 SRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEK 121
R + +E K RE E+++ +EL IKE+YLG K ++R +++
Sbjct: 206 ERMERENNGNDDDDERQKIRE--------EKDKGKELVAIKERYLGGMKKRRRTRHLNDR 257
Query: 122 FRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIR 181
+F F+W+ +EDTS D N +Y+ H+ L +GRGF AG+D ++QK+ ++ ++ E
Sbjct: 258 -KFVFEWDASEDTSIDYNPIYKEKHQVHL-YGRGFIAGIDLKQQKRDQSRFYGDLME--- 312
Query: 182 KKEGVEEKPEEAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 239
K+ EEK +E LK K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I
Sbjct: 313 KRRTNEEKEQEEQRLKKVRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSI 366
Query: 240 SYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGS 299
+ KG KIP P+RNW E L P +L +E+ GYK+P+PIQ AIP+GLQ RD+IG+AETGS
Sbjct: 367 TTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGS 426
Query: 300 GKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
GKTAAF++P+L +I+ LP I E+ +GPYA+++APTRELAQQIEEET+KF LGI+
Sbjct: 427 GKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRT 486
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
V+++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGF
Sbjct: 487 VAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGF 546
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARK 469
EP V +L+ +P +N KP+ +D E EK + YR T MF+ATMPPAVERLAR
Sbjct: 547 EPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARS 606
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADM 529
YLR P VV IG+AGK E + Q V++M E EK +L +L + I+FVN KK D+
Sbjct: 607 YLRRPAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLEVLASGFEPPIIIFVNQKKGCDV 666
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+AK+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NY
Sbjct: 667 LAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNY 726
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHE 648
DM NIE Y HRIGRTGRAGK+GVA TFLT D+ VFYDLKQ +++S S PPELA H
Sbjct: 727 DMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSSVFYDLKQAILESPVSTCPPELANHP 786
Query: 649 ASKFKPGTIPDRPPRRNDTVFA 670
++ KPGTI + RR +T+FA
Sbjct: 787 DAQHKPGTILTK-KRREETIFA 807
>gi|440798652|gb|ELR19719.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 906
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/588 (56%), Positives = 415/588 (70%), Gaps = 28/588 (4%)
Query: 92 RERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
RE +EL IK YLG KK K++V+KPSEKF+F F W+ +EDTSRD N LY + +
Sbjct: 334 REESQELSEIKAHYLGLKKEKRKVVKPSEKFKFVFAWDLSEDTSRDHNPLYNQRLDVRPS 393
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDM 211
FGRGF AG+D+++Q K A + +K+ R VE + L E DT
Sbjct: 394 FGRGFLAGIDQKQQLK-AFEADKDHSRVAR----VERR--------LDESYLGRGDT--- 437
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
RHWS+K L EMT+RDWRIF+ED +IS KG ++P PMRNW E KL LL A+E GY
Sbjct: 438 --GRHWSQKALGEMTQRDWRIFKEDHSISTKGGRVPVPMRNWGESKLPTVLLDAIESAGY 495
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K P PIQM +IP+GLQ RD+IG+AETGSGKT AFVLPML YIS+LPP++ EN A+GPYA+
Sbjct: 496 KQPMPIQMQSIPIGLQGRDLIGLAETGSGKTCAFVLPMLVYISKLPPMTAENAADGPYAL 555
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
+MAPTRELA QIE+E KFA +G + V++VGGQSIEEQGF +R+G E++IATPGRL+DC
Sbjct: 556 IMAPTRELALQIEQEAAKFASAMGFRTVAVVGGQSIEEQGFSLRRGAEILIATPGRLVDC 615
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED---------EE 442
LE+RY VLNQCNYVVLDEADRM+DMGFE QV +LDAMPSSNLK E+E +E
Sbjct: 616 LEQRYVVLNQCNYVVLDEADRMVDMGFEVQVTTILDAMPSSNLKSEDETTAEEQMAALQE 675
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEK 501
+YRTT MFSATMP AVERLARKYLR+P V+ IG GKA E I Q V +K +++K
Sbjct: 676 EKPDHVYRTTVMFSATMPVAVERLARKYLRHPAVIQIGEVGKAGEKIEQRVEFVKGDNDK 735
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
++L LL +VFVN KKN D++++ ++K G+R TLH GKSQE RE +++GF+
Sbjct: 736 KNKLLNLLYSGIAPPIMVFVNQKKNCDILSRAINKAGFRSATLHSGKSQELREEAMDGFK 795
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
++LV+TDVAGRGID+ V HVINYDM +I YTHRIGRTGRAG GVA +F+T
Sbjct: 796 AGTIDILVSTDVAGRGIDVKGVTHVINYDMAKSIADYTHRIGRTGRAGMKGVAVSFITND 855
Query: 622 DTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
D D+FYDLKQML S +PVP ELA H A+K KPG + R +TV
Sbjct: 856 DADLFYDLKQMLQASGNPVPNELAHHPAAKIKPGAAGTQGKTRRETVI 903
>gi|428172478|gb|EKX41387.1| hypothetical protein GUITHDRAFT_96054 [Guillardia theta CCMP2712]
Length = 654
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/583 (56%), Positives = 422/583 (72%), Gaps = 17/583 (2%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
++ELE ++++YLG K KK+V+K ++KFRF+FDWE TEDTS D+N LY HEAQLLFGR
Sbjct: 54 QKELEQVQKRYLGGAKVKKKVVKVTDKFRFAFDWEATEDTSADVNPLYNKKHEAQLLFGR 113
Query: 155 GFRAGMDRREQKK-------LAAKNEKEMREEIRKKEGVE-EKPEEAAALKLKEE-AADL 205
G RAG+D REQKK L A K E++ ++ E K +E +K+KE A+
Sbjct: 114 GLRAGIDMREQKKNSTYVENLEAVRAKIAEEDVDAEQAEEYRKHQEEMKMKMKEAYASRA 173
Query: 206 YDTFDMRV---DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPEL 262
+ D + +HW +KKL +MTERDWRIFREDF I+ +G K P+RNW E L PE+
Sbjct: 174 KASLDRNMALPGKHWMDKKLTDMTERDWRIFREDFQIATRGGKPCNPIRNWEESGLPPEI 233
Query: 263 LRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE 322
L A++ YK PSPIQM IPLGL RDV+GIA+TGSGKTAAFVLPML YIS+ PPI+++
Sbjct: 234 LEAIKEKKYKIPSPIQMQCIPLGLLNRDVVGIAQTGSGKTAAFVLPMLVYISKQPPITQD 293
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG---QSIEEQGFRIRQGCE 379
EGP A+++APTRELA QI +E + F ++ I+ +VGG +SIEEQGF +RQG E
Sbjct: 294 TAPEGPLALILAPTRELANQIYDEAITFCKFMNIRCFPLVGGGGVKSIEEQGFTVRQGVE 353
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
+++ATPGRLIDCLERR VLNQCNYVVLDEADRMIDMGFEPQV +LDAMPSSNLKPE++
Sbjct: 354 ILVATPGRLIDCLERRLVVLNQCNYVVLDEADRMIDMGFEPQVQAILDAMPSSNLKPEDD 413
Query: 440 -DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
EE +++ YR T+MFSATMPPA+ER+ RKYLR P VT+G AG+ + QH + E
Sbjct: 414 AAEEGNQEFRYRQTFMFSATMPPAIERITRKYLRRPAFVTVGEAGQTASTVEQHFIFCSE 473
Query: 499 SEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
++K +RL LL G +VFVN +KN D++ K L G+RVT LHGGKSQE RE +L+
Sbjct: 474 NQKNARLLDLLAR-GKPPIMVFVNARKNCDVLHKELSSRGHRVTLLHGGKSQEGREEALD 532
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
F++ Y+++V TDVAGRGIDI V HV+N+D P NIE YTHRIGRTGRAGK+GVATT L
Sbjct: 533 SFKSGHYDIMVCTDVAGRGIDISGVEHVVNFDCPKNIEDYTHRIGRTGRAGKSGVATTIL 592
Query: 619 TFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRP 661
T DT ++YDLK+ L +SN VP E+ H A++ KPG +P +P
Sbjct: 593 TPEDTHIYYDLKEKLQESNQNVPREILSHPAAQQKPGAVPQKP 635
>gi|91084021|ref|XP_975350.1| PREDICTED: similar to pre-mRNA-splicing ATP-dependent RNA helicase
PRP28 [Tribolium castaneum]
gi|270008001|gb|EFA04449.1| hypothetical protein TcasGA2_TC014753 [Tribolium castaneum]
Length = 762
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/669 (52%), Positives = 462/669 (69%), Gaps = 35/669 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP+FLTK QR AL+RRQE++ + +++QE +++++ Q + DRE RR
Sbjct: 117 KPVFLTKEQRAAEALKRRQEEVDRLRKQQEAERKIIENVQASRQEEQRKDDRE---FRRP 173
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
R+ E +K +++RE+E + IKE+YLG K K+RV + +++ +F FDW+ ED
Sbjct: 174 RDREKDE------DKQKDKDREKESDAIKERYLGLIKKKRRVRRLNDR-KFVFDWDAGED 226
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS+D N LY+ H+ Q FGRG AG+D + QK+ +K E+ E+ R+ E EK +E
Sbjct: 227 TSQDYNPLYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEK-RRTEA--EKAQEK 282
Query: 194 AALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
LK ++E L+D DRHWSEK + EMTERDWRIFRED+NI+ KG KIP P+R
Sbjct: 283 VRLKKVRRKEEKQLWD------DRHWSEKDVSEMTERDWRIFREDYNITIKGGKIPEPIR 336
Query: 252 NWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLT 311
+W E + ELL +++VGYK P+PIQ AIP+G+Q RD+IG+AETGSGKT AF++P+L+
Sbjct: 337 SWKESGIQKELLEIIDKVGYKEPTPIQRQAIPIGMQNRDIIGVAETGSGKTLAFLIPLLS 396
Query: 312 YISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
+I LP I +A+ GPYA+++APTRELAQQIEEETVKF LGI+ V +VGG S EEQ
Sbjct: 397 WIQSLPKIERTEDADQGPYAIILAPTRELAQQIEEETVKFGQPLGIRTVVVVGGLSREEQ 456
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
GFR+R GCE+VIATPGRLID LE RY VLNQC Y+V+DEADRMID+GFE V +L+ MP
Sbjct: 457 GFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVMDEADRMIDLGFEADVQKILEYMP 516
Query: 431 SSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA 482
+NLKP++E+ E + K+ YR T MF+ATMPPAVERLAR YLR P VV IG+
Sbjct: 517 VTNLKPDSEEAEDSKIILANYNSKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSI 576
Query: 483 GKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVT 542
GK TE + Q V +M E++K +L L + D I+FVN KK AD++AK L+KLGY
Sbjct: 577 GKPTERVEQIVHIMTENDKRKKLMEYLSKGVDPPIIIFVNQKKGADVLAKGLEKLGYNAC 636
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRI
Sbjct: 637 TLHGGKGQEQREYALASLKSGAKDILVATDVAGRGIDIKDVSVVINYDMAKTIEDYTHRI 696
Query: 603 GRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRP 661
GRTGRAGK+GVA +F T D+ +FYDLKQML+ S S PPEL H + +P P R
Sbjct: 697 GRTGRAGKSGVAISFCTNDDSALFYDLKQMLLSSPVSTCPPELMNHPECQIRPNQ-PKR- 754
Query: 662 PRRNDTVFA 670
RR++ +FA
Sbjct: 755 -RRDEMIFA 762
>gi|432114505|gb|ELK36353.1| Putative ATP-dependent RNA helicase DDX23 [Myotis davidii]
Length = 820
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/676 (51%), Positives = 468/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ ++++ E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQKMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++G
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGS 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+ GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLCMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP +N KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ ++ S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILGSPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/686 (51%), Positives = 459/686 (66%), Gaps = 40/686 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQI----AQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERER 69
KP+FLTK QR AL+RRQE++ A + ++Q Q S+ T +S S
Sbjct: 163 KPVFLTKEQRAAEALKRRQEEVERLRAVRDAARDQLQASSSKSITGIATASASMPVAMPP 222
Query: 70 HRREREEEAKA--------------RERARLEKLAERERERELELIKEQYLGSKKPKKRV 115
+ E ++ R+E L +++E+ELE I+E+YLG K K+RV
Sbjct: 223 PAPAKPERRDRGGDRGERGGDRDRDKDSKRVEDLTHKDKEKELEAIRERYLGIVKKKRRV 282
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKE 175
+ +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K +
Sbjct: 283 RRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSKFYGD 340
Query: 176 MREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRE 235
+ E+ R + E++ +K KE+ +D DRHWSEK +EMTERDWRIFRE
Sbjct: 341 LLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKDNDEMTERDWRIFRE 393
Query: 236 DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
D+NI+ KG KIP P+R+W+E PE++ ++ VGYK P+PIQ AIP+GLQ RD+IG+A
Sbjct: 394 DYNITIKGGKIPNPIRSWSESGFPPEIIEIIDSVGYKEPTPIQRQAIPIGLQNRDIIGVA 453
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
ETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET+KF L
Sbjct: 454 ETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETIKFGQPL 513
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
GI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMI
Sbjct: 514 GIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMI 573
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVER 465
DMGFEP V +L+ MP +NLKP+ E+ E DEK++ YR T MF+ATMPPAVER
Sbjct: 574 DMGFEPDVQKILEYMPVTNLKPDTEEAE-DEKKLMENFYTKKKYRQTVMFTATMPPAVER 632
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LAR YLR P V IG+ GK TE +Q V MM E++K +L ++L + I+FVN KK
Sbjct: 633 LARSYLRRPATVYIGSVGKPTERTNQIVYMMGENDKRKKLMQILSAGIEPPVIIFVNQKK 692
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+
Sbjct: 693 GADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSL 752
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPEL 644
VINYDM +IE YTHRIGRTGRAGKTGVA +F+T D+ +FYDLKQ + S S PPEL
Sbjct: 753 VINYDMAKSIEDYTHRIGRTGRAGKTGVAISFVTKDDSSLFYDLKQCVTASPVSVCPPEL 812
Query: 645 AKHEASKFKPGTIPDRPPRRNDTVFA 670
H ++ KPGT+ + RR + +FA
Sbjct: 813 MNHPEAQHKPGTVVTK-KRREEKIFA 837
>gi|312375100|gb|EFR22532.1| hypothetical protein AND_15065 [Anopheles darlingi]
Length = 821
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/680 (51%), Positives = 457/680 (67%), Gaps = 33/680 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQ---------QQLLSQPQTHGRNSSDSRD 64
KP+F+TK QR AL+RRQE++A K LL++ + D RD
Sbjct: 152 KPVFITKEQRAAEALKRRQEEVAAMKAASLANVPKFGDVPVTALLAREKRDPLEKYDRRD 211
Query: 65 RERER-HRREREEEAKARERARLEKLAE---RERERELELIKEQYLGSKKPKKRVIKPSE 120
RER+ RE++++ R AE +++E+E E I+E+YLG K K+RV + ++
Sbjct: 212 RERKGIEDREKDKDNDKRRSGAATTEAEPVVKDKEKEQEAIRERYLGIIKKKRRVRRLND 271
Query: 121 KFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI 180
+ +F FDW+ EDTS D N LY++ H Q FGRG AG+D +EQK+ +K ++ E+
Sbjct: 272 R-KFVFDWDAGEDTSIDYNNLYKDRHHVQF-FGRGHIAGIDIKEQKRKQSKFYGDLLEK- 328
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
R+ E +E+ + K+E +D DRHWSEK ++EMTERDWRIFRED+NI+
Sbjct: 329 RRTEAEKEQEKVRLKKVKKKEDKQKWD------DRHWSEKDVDEMTERDWRIFREDYNIT 382
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
KG KIP P+RNW E E+L +++VGYK+P+PIQ AIP+GLQ RD+IGIAETGSG
Sbjct: 383 IKGGKIPNPIRNWIESGFPKEILEIIDKVGYKDPTPIQRQAIPIGLQNRDIIGIAETGSG 442
Query: 301 KTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVV 359
KT AF++P+LT+I LP I +E +GPYA+++APTRELAQQIEEET KF LGI+ V
Sbjct: 443 KTLAFLIPLLTWIQSLPKIERQETADQGPYAIILAPTRELAQQIEEETQKFGTPLGIRTV 502
Query: 360 SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
+VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+V+DEADRMIDMGFE
Sbjct: 503 VVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVMDEADRMIDMGFE 562
Query: 420 PQVVGVLDAMPSSNLKPENED--------EELDEKRIYRTTYMFSATMPPAVERLARKYL 471
P V +L+ MP +NLKP+ E+ E + K+ YR T MF+ATMPPAVERLAR YL
Sbjct: 563 PDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATMPPAVERLARTYL 622
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P V IG+ GK TE Q + +M E++K +L +L + I+FVN KK AD++A
Sbjct: 623 RRPATVYIGSIGKPTERTEQIIHIMGENDKRKKLMEILSRGVEPPCIIFVNQKKGADVLA 682
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K L+KLGY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ VINYDM
Sbjct: 683 KGLEKLGYNACTLHGGKGQEQREYALASLKNGSKDILVATDVAGRGIDIKDVSLVINYDM 742
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
+IE YTHRIGRTGRAGKTG A +F T D+ +FYDLKQML+ S S PPEL H +
Sbjct: 743 AKSIEDYTHRIGRTGRAGKTGCAISFCTKDDSHLFYDLKQMLMSSPVSVCPPELMNHPDA 802
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGT+ + RR + +FA
Sbjct: 803 QHKPGTVVTK-KRREEKIFA 821
>gi|340375196|ref|XP_003386122.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Amphimedon
queenslandica]
Length = 804
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/672 (50%), Positives = 479/672 (71%), Gaps = 39/672 (5%)
Query: 13 KKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRR 72
+KP+FL+K +RE+LAL++RQE++ Q+++ E+++ L Q H + SD R ERE+ ++
Sbjct: 159 QKPVFLSKKEREELALKKRQEEVEAQRKKMEEER-LKRQQYLHSK--SDIR-IEREKRQK 214
Query: 73 EREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTE 132
ERE+ L +++++RE++ IK +YLG +K K+R+ + +++ +F FDW++ E
Sbjct: 215 ERED-----------LLIQKDKDREMDTIKSRYLGGEKRKRRMRRLTDR-KFVFDWDSNE 262
Query: 133 DTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEE 192
DTS D N LY+N H+ Q FGRG AG+D + QK+ +K + E R+ + +++ EE
Sbjct: 263 DTSNDFNPLYRNRHQLQF-FGRGHIAGIDIKAQKREQSKFYSNLLES-RRTDEEKKQAEE 320
Query: 193 AAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRN 252
+ K ++E +D +RHW+EKKL+EMT+RDWRIFRED+NI+ KG ++P P+R
Sbjct: 321 NESKKREKEDKIKWD------ERHWTEKKLDEMTDRDWRIFREDYNITTKGGRVPHPIRY 374
Query: 253 WAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTY 312
W+EG L ++ + +GYK P+ IQ AIP+GLQ RD+IGIAETGSGKTAAFV+P+L +
Sbjct: 375 WSEGGLPEKITDVIRGLGYKEPTAIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPLLVW 434
Query: 313 ISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQG 371
++ LP I E + + GPYA+++APTRELAQQIEEET+KFA L ++ VS+VGG S EEQG
Sbjct: 435 VTSLPKIVREADVDQGPYAIILAPTRELAQQIEEETMKFAKPLDVRTVSLVGGLSREEQG 494
Query: 372 FRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS 431
F++R GCE+VIATPGRLID LE RY VL+QC Y+VLDEADRMIDMGFEP+V +L +P
Sbjct: 495 FQLRLGCEIVIATPGRLIDVLENRYLVLSQCTYIVLDEADRMIDMGFEPEVQKILAHLPV 554
Query: 432 SNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA 482
SN+KP+++D E K + YR T MF+ATMPPAVERLAR YLR P VV IG+
Sbjct: 555 SNMKPDSDDAEDPTKMLVGINSSHHRYRQTVMFTATMPPAVERLARTYLRRPCVVYIGSI 614
Query: 483 GKATELISQHVVMMKESEKFSRLQRLLDELGD--KTAIVFVNTKKNADMVAKNLDKLGYR 540
GK + + Q V M+ E EK +LQ++L GD I+FVN KK AD+++K+L+K+GYR
Sbjct: 615 GKPVDRVEQVVYMVSEVEKRKKLQQIL-AGGDVEPPIIIFVNQKKGADVLSKSLEKIGYR 673
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
TTLHGG++QEQRE +L + ++LVATDVAGRGIDI DV V+NYDM +IE YTH
Sbjct: 674 ATTLHGGRNQEQREFALASLKKGEKDILVATDVAGRGIDIRDVTMVLNYDMAKSIEDYTH 733
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPD 659
RIGRTGRAGKTG+A TFLT D+ V+YDLKQ+L++S S P EL H ++ KPGT+
Sbjct: 734 RIGRTGRAGKTGLAITFLTKDDSAVYYDLKQLLLESPVSSCPSELLNHPDAQHKPGTVVQ 793
Query: 660 RPPRRNDTVFAH 671
+ R+++T++ +
Sbjct: 794 K-KRKDETIYTN 804
>gi|195437654|ref|XP_002066755.1| GK24389 [Drosophila willistoni]
gi|194162840|gb|EDW77741.1| GK24389 [Drosophila willistoni]
Length = 808
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/694 (50%), Positives = 455/694 (65%), Gaps = 48/694 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNS-------------- 59
KP+FLTK QR A++RRQE++ + Q+ ++ +S G +S
Sbjct: 126 KPVFLTKEQRAAEAIKRRQEEVEHMRAVQDAVREQMSMSTKGGISSMATAMASAPPTAPP 185
Query: 60 -------SDSRDRERERHRREREEEAKARERA-----RLEKLAERERERELELIKEQYLG 107
SD RDR R + +R R E L +++E+ELE I+E+YLG
Sbjct: 186 MAPPQAKSDRRDRNDRGGERGGDRGGDRGDRGDRDSKRAEDLTHKDKEKELEAIRERYLG 245
Query: 108 SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK 167
K K+RV + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+
Sbjct: 246 IIKKKRRVRRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKR 303
Query: 168 LAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTE 227
+K ++ E+ R + E++ +K KE+ +D DRHWSEK +EMTE
Sbjct: 304 TQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKDNDEMTE 356
Query: 228 RDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQ 287
RDWRIFRED+NI+ KG +IP P+R+W E PE++ ++RVGYK P+PIQ AIP+GLQ
Sbjct: 357 RDWRIFREDYNITIKGGRIPNPIRSWNESGFPPEIIDIIDRVGYKEPTPIQRQAIPIGLQ 416
Query: 288 QRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEE 346
RD+IG+AETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEE
Sbjct: 417 NRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEE 476
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
T KF LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+V
Sbjct: 477 TTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIV 536
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSA 457
LDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E DE ++ YR T MF+A
Sbjct: 537 LDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAE-DESKLMENFYTKKKYRQTVMFTA 595
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
TMPPAVERLAR YLR P V IG+ GK TE Q V MM E++K +L +L D
Sbjct: 596 TMPPAVERLARSYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRSIDPPI 655
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
I+FVN KK AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRG
Sbjct: 656 IIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRG 715
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
IDI DV+ VINYDM IE YTHRIGRTGRAGK GVA +F+T D+ +FYDLKQ + S
Sbjct: 716 IDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKNGVAISFVTKDDSSLFYDLKQCVTASP 775
Query: 638 -SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
S PPEL H ++ KPGT+ + RR + +FA
Sbjct: 776 VSVCPPELMNHPEAQHKPGTVVTK-KRREEKIFA 808
>gi|432866547|ref|XP_004070857.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Oryzias
latipes]
Length = 802
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/681 (50%), Positives = 462/681 (67%), Gaps = 44/681 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ-----------LLSQPQTHGRNSSDS 62
KP FL++A+RE A++RR++Q+ ++K+ E +++ +L PQ R
Sbjct: 142 KPKFLSRAEREAEAIKRREQQVEEKKKLMEDERKKRRVFQDMGRKMLEDPQERERRERRE 201
Query: 63 RDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKF 122
R E +E K RE E+++ +EL IKE+YLG K ++R +++
Sbjct: 202 RMDRENNGNEEDDERLKMRE--------EKDKTKELHAIKERYLGGIKKRRRTRHLNDR- 252
Query: 123 RFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK 182
+F F+W+ +EDTS D N +Y+ H+ QL +GRGF AG+D ++QK+ ++ ++ E K
Sbjct: 253 KFVFEWDASEDTSVDYNPIYKEKHQVQL-YGRGFIAGIDLKQQKRDQSRFYGDLME---K 308
Query: 183 KEGVEEKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
+ +EEK +E LK K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 309 RRTLEEKEQEETRLKKVRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSIT 362
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
KG KIP P+RNW E L +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSG
Sbjct: 363 TKGGKIPNPIRNWKEYALPAHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSG 422
Query: 301 KTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVV 359
KTAAF++P+L +I+ LP I E+ +GPYAV++APTRELAQQIEEET+KF LGI+ V
Sbjct: 423 KTAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGKPLGIRTV 482
Query: 360 SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
+++GG S E+QGF++R GCE+VIATPGRLID LE RY VL +C YVVLDEADRMIDMGFE
Sbjct: 483 AVIGGISREDQGFKLRMGCEIVIATPGRLIDVLENRYLVLGRCTYVVLDEADRMIDMGFE 542
Query: 420 PQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKY 470
P V +L+ +P +N KP+ ++ E EK YR T MF+ATMPPAVERLAR Y
Sbjct: 543 PDVQKILEYIPVTNQKPDTDEAEDPEKMTMNFESGKHKYRQTVMFTATMPPAVERLARSY 602
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMV 530
LR VV IG+AGK E + Q V++M E EK ++ +L + I+FVN KK D++
Sbjct: 603 LRRAAVVYIGSAGKPHERVEQKVMLMSEGEKRKKMLEVLASGFEPPIIIFVNQKKGCDVL 662
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
AK+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ VINYD
Sbjct: 663 AKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVINYD 722
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEA 649
M NIE Y HRIGRTGRAGK+GVA TFLT D+ VFYDLKQ +++S S PPELA H
Sbjct: 723 MAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSAVFYDLKQAILESPVSNCPPELANHPD 782
Query: 650 SKFKPGTIPDRPPRRNDTVFA 670
++ KPGTI + RR +T+FA
Sbjct: 783 AQHKPGTILTK-KRREETIFA 802
>gi|380021885|ref|XP_003694787.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Apis florea]
Length = 788
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/667 (51%), Positives = 456/667 (68%), Gaps = 32/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R LAL++RQE++ K++QE ++ + G++ R +R
Sbjct: 144 KPKFLTKEERAALALQKRQEEVEAIKKQQEDIRKSF-HSENAGKDREWDDRDRRRDGQRT 202
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
RE+E K ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 203 REDEIK-----------DKDKEKEVEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDTSED 250
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N++Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 251 TSVDYNSIYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 309
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 310 KKVKRKEEKQK-WD------DRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW 362
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 363 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 422
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 423 TSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 482
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 483 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 542
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P VV IG+ GK
Sbjct: 543 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGK 602
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+KLGY TL
Sbjct: 603 PTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTL 662
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 663 HGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 722
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 723 TGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KR 781
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 782 REEKIFA 788
>gi|307181491|gb|EFN69083.1| Probable ATP-dependent RNA helicase DDX23 [Camponotus floridanus]
Length = 669
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/667 (52%), Positives = 460/667 (68%), Gaps = 32/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R +ALE+RQ+++ K++QE+ +L SDS +ERE R+
Sbjct: 25 KPKFLTKEERAAIALEKRQQEVEAIKKQQEEDFKLFH---------SDSSGKEREWDDRD 75
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
R + +R R + + ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 76 RRRDG---QRLREDDIKDKDKEKEVEAIKERYLGIIKKKRRVRRLNDR-KFVFDWDTSED 131
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N +Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 132 TSVDYNNIYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 190
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 191 KKVKRKEEKQK-WD------DRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSW 243
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 244 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 303
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I +EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 304 TNLPKIERLDEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 363
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 364 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 423
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P VV IG+ GK
Sbjct: 424 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGK 483
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++AK L+K GY TL
Sbjct: 484 PTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLAKGLEKFGYNACTL 543
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 544 HGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 603
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 604 TGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KR 662
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 663 REEKIFA 669
>gi|355564184|gb|EHH20684.1| Putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/676 (50%), Positives = 466/676 (68%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIF ED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFCEDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE VL++C YV+LDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENCSLVLSRCTYVILDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ + EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEADNPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSVVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + + +T+FA
Sbjct: 806 GTILTK-KHQEETIFA 820
>gi|195388290|ref|XP_002052813.1| GJ17767 [Drosophila virilis]
gi|194149270|gb|EDW64968.1| GJ17767 [Drosophila virilis]
Length = 835
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/690 (50%), Positives = 456/690 (66%), Gaps = 44/690 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQI----AQQKRRQEQQQQLLSQPQTHG------------- 56
KP+FLTK QR A++RRQE++ A + ++Q Q S G
Sbjct: 157 KPVFLTKEQRAAEAIKRRQEEVERLRAARDSARDQMQSASSSKSNSGIATASASLPVAMA 216
Query: 57 -----RNSSDSRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKP 111
S E + R+ R+E L +++E+ELE I+E+YLG K
Sbjct: 217 PPPAPMKSERRERGGDRGGGGGGGERDRDRDNKRVEDLTHKDKEKELEAIRERYLGIVKK 276
Query: 112 KKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAK 171
K+RV + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K
Sbjct: 277 KRRVRRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSK 334
Query: 172 NEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWR 231
++ E+ R + E++ +K KE+ +D DRHWSEK +EMTERDWR
Sbjct: 335 FYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKDNDEMTERDWR 387
Query: 232 IFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
IFRED+NI+ KG KIP P+R+W E PE++ ++ VGYK P+PIQ AIP+GLQ RD+
Sbjct: 388 IFREDYNITIKGGKIPNPIRSWNESGFPPEIIEIIDTVGYKEPTPIQRQAIPIGLQNRDI 447
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKF 350
IG+AETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET+KF
Sbjct: 448 IGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETIKF 507
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEA
Sbjct: 508 GQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEA 567
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPP 461
DRMIDMGFEP V +L+ MP +NLKP++E+ E DEK++ YR T MF+ATMPP
Sbjct: 568 DRMIDMGFEPDVQKILEYMPVTNLKPDSEEAE-DEKKLMENFYTKKKYRQTVMFTATMPP 626
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFV 521
AVERLAR YLR P V IG+ GK TE +Q V MM E++K +L ++L + I+FV
Sbjct: 627 AVERLARSYLRRPATVYIGSVGKPTERTNQIVYMMGENDKRKKLMQILSAGIEPPVIIFV 686
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
N KK AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI
Sbjct: 687 NQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIK 746
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPV 640
DV+ VINYDM +IE YTHRIGRTGRAGKTGVA +F+T D+ +FYDLKQ + S S
Sbjct: 747 DVSLVINYDMAKSIEDYTHRIGRTGRAGKTGVAISFVTKDDSSLFYDLKQCVTASPVSVC 806
Query: 641 PPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
PPEL H ++ KPGT+ + RR + +FA
Sbjct: 807 PPELTNHPEAQHKPGTVVTK-KRREEKIFA 835
>gi|340724474|ref|XP_003400607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
terrestris]
Length = 784
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/667 (51%), Positives = 456/667 (68%), Gaps = 32/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R LAL++RQE++ +++QE ++ + G++ R +R
Sbjct: 140 KPKFLTKEERAALALQKRQEEVEAIRKQQEDIRKSF-HSENVGKDREWDERDRRRDGQRT 198
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
RE+E K ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 199 REDEIK-----------DKDKEKEVEAIKERYLGLVKKKRRVRRLNDR-KFVFDWDTSED 246
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N++Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 247 TSVDYNSIYKERHQVQF-FGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 305
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 306 KKVKRKEEKQK-WD------DRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW 358
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 359 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 418
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 419 TSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 478
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 479 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 538
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P VV IG+ GK
Sbjct: 539 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGK 598
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+KLGY TL
Sbjct: 599 PTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTL 658
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 659 HGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 718
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 719 TGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KR 777
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 778 REEKIFA 784
>gi|348502929|ref|XP_003439019.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Oreochromis
niloticus]
Length = 806
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/680 (51%), Positives = 465/680 (68%), Gaps = 44/680 (6%)
Query: 15 PLFLTKAQREQLALERRQEQIA---------QQKRR--QEQQQQLLSQPQTHGRNSSDSR 63
P FL+KA+RE AL+RR+++ ++KRR Q+ +++L PQ R R
Sbjct: 147 PKFLSKAEREAEALKRREQETEERRRMIEDERKKRRMFQDIGRKMLEDPQERERRERRER 206
Query: 64 DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR 123
+ +E K RE E+++ +EL+ IKE+YLG K ++R +++ +
Sbjct: 207 MERENNGNEDDDERQKLRE--------EKDKGKELQAIKERYLGGIKKRRRTRHLNDR-K 257
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
F F+W+ +EDTS D N +Y+ H+ QL +GRGF AG+D ++QK+ ++ ++ E K+
Sbjct: 258 FVFEWDASEDTSVDYNPIYKEKHQVQL-YGRGFIAGIDLKQQKREQSRFYGDLME---KR 313
Query: 184 EGVEEKPEEAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+EEK +E LK K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 314 RTLEEKEQEETRLKKMRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITT 367
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KG KIP P+RNW E L +L +++ GYK+P+PIQ AIP+GLQ RD+IG+AETGSGK
Sbjct: 368 KGGKIPNPIRNWKEYPLPAHILEVIDKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGK 427
Query: 302 TAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L +I+ LP I E+ +GPYAV++APTRELAQQIEEET+KF LGI+ V+
Sbjct: 428 TAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGKPLGIRTVA 487
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 488 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 547
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ +P +N KP+ E+ E EK YR T MF+ATMPPAVERLAR YL
Sbjct: 548 DVQKILEYIPVTNQKPDTEEAEDPEKMTMNFESGKHKYRQTVMFTATMPPAVERLARSYL 607
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+AGK E + Q V++M E EK +L +L + I+FVN KK D++A
Sbjct: 608 RRPAVVYIGSAGKPHERVEQKVLLMSEGEKRKKLLEVLSHGFEPPIIIFVNQKKGCDVLA 667
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ VINYDM
Sbjct: 668 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVINYDM 727
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE Y HRIGRTGRAGK+GVA TFLT D+ VFYDLKQ +++S S PPELA H +
Sbjct: 728 AKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSAVFYDLKQAILESPVSTCPPELANHPDA 787
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 788 QHKPGTILTK-KRREETIFA 806
>gi|194758757|ref|XP_001961625.1| GF15062 [Drosophila ananassae]
gi|190615322|gb|EDV30846.1| GF15062 [Drosophila ananassae]
Length = 819
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/685 (50%), Positives = 452/685 (65%), Gaps = 39/685 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ----THGRNSSDSRDRERER 69
KP+FLTK QR Q AL+RRQE++ + K QE ++ ++ + G +
Sbjct: 146 KPVFLTKEQRAQEALKRRQEEVERLKAVQEAAREQMANANKVSISMGTAMASGAPPPAVM 205
Query: 70 HRREREEEAKARERA-------------RLEKLAERERERELELIKEQYLGSKKPKKRVI 116
+ + + R E+L +++E+ELE I+E+YLG K K+RV
Sbjct: 206 APPPKPDRRERGRDRGDRGDRGERGDEKRSEELTHKDKEKELEAIRERYLGIVKKKRRVR 265
Query: 117 KPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEM 176
+ +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K ++
Sbjct: 266 RLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSKFYGDL 323
Query: 177 REEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRED 236
E+ R + E++ +K KE+ +D DRHWSEK +EMTERDWRIFRED
Sbjct: 324 LEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKDNDEMTERDWRIFRED 376
Query: 237 FNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAE 296
+NI+ KG KIP P+R+W+E E++ +++VGYK P+PIQ AIP+GLQ RD+IG+AE
Sbjct: 377 YNITIKGGKIPNPIRSWSESGFPREIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAE 436
Query: 297 TGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG 355
TGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET KF LG
Sbjct: 437 TGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLG 496
Query: 356 IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMID 415
I+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMID
Sbjct: 497 IRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMID 556
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERL 466
MGFEP V +L+ MP SNLKP+ E+ E DE ++ YR T MF+ATMPPAVERL
Sbjct: 557 MGFEPDVQKILEYMPVSNLKPDTEEAE-DENKLMENFYTKKKYRQTVMFTATMPPAVERL 615
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR YLR P V IG+ GK TE Q V MM E++K +L +L D I+FVN KK
Sbjct: 616 ARSYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRSIDPPVIIFVNQKKG 675
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ V
Sbjct: 676 ADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLV 735
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELA 645
INYDM IE YTHRIGRTGRAGK GVA +F+T D+ +FYDLKQ + S S PPEL
Sbjct: 736 INYDMAKTIEDYTHRIGRTGRAGKNGVAISFVTKDDSALFYDLKQCVTASPVSVCPPELM 795
Query: 646 KHEASKFKPGTIPDRPPRRNDTVFA 670
H ++ KPGT+ + RR + +FA
Sbjct: 796 NHPEAQHKPGTVVTK-KRREEKIFA 819
>gi|119578414|gb|EAW58010.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_a [Homo
sapiens]
Length = 634
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/608 (54%), Positives = 437/608 (71%), Gaps = 29/608 (4%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+W+ +EDTS
Sbjct: 43 EDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFEWDASEDTS 97
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +EEK +E A
Sbjct: 98 IDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLEEKEQEEAR 153
Query: 196 LKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG KIP P+R+W
Sbjct: 154 LRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSW 207
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
+ L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I
Sbjct: 208 KDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI 267
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG S E+QGF
Sbjct: 268 TTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 327
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V +L+ MP S
Sbjct: 328 RLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVS 387
Query: 433 NLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 483
N KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P VV IG+AG
Sbjct: 388 NQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG 447
Query: 484 KATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTT 543
K E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+K+GY T
Sbjct: 448 KPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACT 507
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE Y HRIG
Sbjct: 508 LHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIG 567
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPP 662
RTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KPGTI +
Sbjct: 568 RTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPGTILTK-K 626
Query: 663 RRNDTVFA 670
RR +T+FA
Sbjct: 627 RREETIFA 634
>gi|198474199|ref|XP_001356589.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
gi|198138291|gb|EAL33653.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/686 (50%), Positives = 455/686 (66%), Gaps = 40/686 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ------------------TH 55
KP+FLTK QR A++RRQE++ + + Q+ ++ ++ P+
Sbjct: 154 KPVFLTKEQRAAEAIKRRQEEVERLRAAQDAAREQMAAPREINMSIATAPATAPPSAPMP 213
Query: 56 GRNSSDSRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRV 115
S R R R + R+ R E L +++E+ELE I+E+YLG K K+RV
Sbjct: 214 PPPSRPERRERGNRGDRGDRGGDRDRDNKRAEDLTHKDKEKELEAIRERYLGIVKKKRRV 273
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKE 175
+ +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ ++ +
Sbjct: 274 RRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSQFYGD 331
Query: 176 MREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRE 235
+ E+ R + E++ +K KEE +D DRHWSEK +EMTERDWRIFRE
Sbjct: 332 LLEKRRTEAEKEQEKVRLKKMKRKEEKQK-WD------DRHWSEKDNDEMTERDWRIFRE 384
Query: 236 DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
D+NI+ KG +IP P+R+W E PE++ +++VGYK P+PIQ AIP+GLQ RD+IG+A
Sbjct: 385 DYNITIKGGRIPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVA 444
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
ETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET+KF L
Sbjct: 445 ETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETIKFGQPL 504
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
GI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMI
Sbjct: 505 GIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMI 564
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVER 465
DMGFEP V +L+ MP +NLKP+ E+ E DE ++ YR T MF+ATMPPAVER
Sbjct: 565 DMGFEPDVQKILEYMPVTNLKPDTEEAE-DENKLMENFYTKKKYRQTVMFTATMPPAVER 623
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LAR YLR P V IG+ GK TE Q V MM E++K +L +L D I+FVN KK
Sbjct: 624 LARSYLRRPSTVYIGSMGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQKK 683
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+
Sbjct: 684 GADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSL 743
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPEL 644
VINYDM +IE YTHRIGRTGRAGKTG A +F+T D+ +FYDLKQ + S S PPEL
Sbjct: 744 VINYDMAKSIEDYTHRIGRTGRAGKTGCAISFVTKDDSGLFYDLKQCVTASPVSTCPPEL 803
Query: 645 AKHEASKFKPGTIPDRPPRRNDTVFA 670
H ++ KPGT+ + RR + +FA
Sbjct: 804 TNHPEAQHKPGTVVTK-KRREEKIFA 828
>gi|195032613|ref|XP_001988529.1| GH11216 [Drosophila grimshawi]
gi|193904529|gb|EDW03396.1| GH11216 [Drosophila grimshawi]
Length = 864
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/597 (55%), Positives = 424/597 (71%), Gaps = 22/597 (3%)
Query: 85 RLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
R+E L +++E+ELE I+E+YLG K K+RV + +++ +F FDW+ EDTS D N LY+
Sbjct: 279 RVEDLTHKDKEKELEAIRERYLGIVKKKRRVRRLNDR-KFVFDWDAGEDTSIDYNNLYKE 337
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
H Q FGRG AG+D +EQK+ +K ++ E+ R + E++ +K KE+
Sbjct: 338 RHHVQF-FGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQK 396
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
+D DRHWSEK +EMTERDWRIFRED+NI+ KG KIP P+R+W E PE++
Sbjct: 397 -WD------DRHWSEKDNDEMTERDWRIFREDYNITIKGGKIPNPIRSWNESGFPPEIIE 449
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-EN 323
++ VGYK P+PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L++I LP I E+
Sbjct: 450 IIDTVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLED 509
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+GPYA++MAPTRELAQQIEEET+KF LGI+ V +VGG S EEQGFR+R GCE+VIA
Sbjct: 510 VDQGPYAIIMAPTRELAQQIEEETIKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIA 569
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E
Sbjct: 570 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAE- 628
Query: 444 DEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV 494
DEK++ YR T MF+ATMPPAVERLAR YLR P V IG+ GK TE +Q V
Sbjct: 629 DEKKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTNQIVY 688
Query: 495 MMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
MM E++K +L ++L + I+FVN KK AD++AK L+KLGY TLHGGK QEQRE
Sbjct: 689 MMGENDKRKKLMQILSAGIEPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQRE 748
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L ++ ++LVATDVAGRGIDI DV+ VINYDM +IE YTHRIGRTGRAGKTGVA
Sbjct: 749 YALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKSIEDYTHRIGRTGRAGKTGVA 808
Query: 615 TTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+F+T D+ +FYDLKQ + S S PPEL H ++ KPGT+ + RR + +FA
Sbjct: 809 ISFVTKDDSGLFYDLKQCVTASPVSTCPPELTNHPEAQHKPGTVVTK-KRREEKIFA 864
>gi|242022378|ref|XP_002431617.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
gi|212516925|gb|EEB18879.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
Length = 788
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/685 (50%), Positives = 463/685 (67%), Gaps = 39/685 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQ----QLLSQPQTHGRNSSDSRDRERE- 68
KP+FL+K +R AL+RRQE++ + +++QE+++ + Q++ +N RDR +
Sbjct: 115 KPVFLSKQERAAEALQRRQEEVEKLRKKQEEERKKRIEFSKSAQSNSQNDKSERDRHDDF 174
Query: 69 -------------RHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRV 115
R ++R + ++A L++ + +++E+E E IKE+YLG K K+RV
Sbjct: 175 RRDKDIDRDKDSFRRGKDRSQNDSLSKKADLDE-SIKDKEKEAEAIKERYLGIVKKKRRV 233
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKE 175
+ +++ +F FDW+ EDTS D N LY+ H+ Q FGRG AG+D + QK+ +K E
Sbjct: 234 RRLNDR-KFVFDWDAGEDTSLDYNPLYKERHQVQF-FGRGNIAGIDIKAQKRDQSKFYGE 291
Query: 176 MREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRE 235
+ E+ R+ + +E+ + K+E +D DRHWSEK L+EMTERDWRIFRE
Sbjct: 292 LLEK-RRTDAEKEQEKVRLKKLRKKEEKQKWD------DRHWSEKALDEMTERDWRIFRE 344
Query: 236 DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
D+NI+ KG KIP P+RNW E K+ E+L +ERVGY +PIQ AIP+GLQ RD+IG+A
Sbjct: 345 DYNITIKGGKIPDPIRNWKEAKIPQEILDIIERVGYTEATPIQRQAIPIGLQNRDIIGVA 404
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
ETGSGKT AF++P++ +I LP I E+ +GPYA+++APTRELAQQIEEET KF + L
Sbjct: 405 ETGSGKTLAFLIPLIMWIQSLPKIQRMEDADQGPYAIILAPTRELAQQIEEETNKFGNPL 464
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
GI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMI
Sbjct: 465 GIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMI 524
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDE--------KRIYRTTYMFSATMPPAVERL 466
DMGFEP V +L+ MP +NLKP+ E+ E D+ K+ YR T MF+ATMPPAVERL
Sbjct: 525 DMGFEPDVQKILEYMPVTNLKPDTEEAEDDKFLLANYNSKKKYRQTVMFTATMPPAVERL 584
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR YLR P VV IG+ GK E + Q V ++ E +K +L LL + I+FVN KK
Sbjct: 585 ARTYLRRPAVVYIGSVGKPVERVEQIVHIVSEQDKRRKLCELLARGVEPPVIIFVNQKKG 644
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD++A+ L+KLGY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V
Sbjct: 645 ADVLARGLEKLGYNACTLHGGKGQEQREYALSSLKNGTKDILVATDVAGRGIDIKDVSMV 704
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELA 645
INYDM IE YTHRIGRTGRAGK G+A +F T D+ +FYDLKQ+++ S S PPEL
Sbjct: 705 INYDMAKTIEDYTHRIGRTGRAGKHGIAVSFCTKDDSGLFYDLKQLILSSPISTCPPELL 764
Query: 646 KHEASKFKPGTIPDRPPRRNDTVFA 670
H ++ KPGT+ + RR + +FA
Sbjct: 765 NHPDAQHKPGTVVTK-KRREEKIFA 788
>gi|190702284|gb|ACE75181.1| ATP-dependent RNA helicase [Glyptapanteles flavicoxis]
Length = 796
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/667 (51%), Positives = 454/667 (68%), Gaps = 31/667 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R LAL++RQE++ +++Q + ++ + D RD R R +
Sbjct: 151 KPKFLTKEERTALALKKRQEEVENLRKQQLEDRKNADVGGSKDSRDWDDRDNSRRRDSQR 210
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
REEE K ++++E+E+E IKE+YLG K K+RV + +++ +F FDW+ +ED
Sbjct: 211 REEENK-----------DKDKEKEVEAIKERYLGLIKKKRRVRRLNDR-KFVFDWDTSED 258
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N +Y+ H+ Q FGRG AG+D + QK+ +K E+ E+ R + E++
Sbjct: 259 TSVDYNNIYKERHQVQF-FGRGNIAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRL 317
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+K KEE +D DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W
Sbjct: 318 KKVKRKEEKQK-WD------DRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSW 370
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E E+L +++VGYK+ +PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I
Sbjct: 371 KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWI 430
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I EA+ GPY++++APTRELAQQIEEET KF LGI+ V +VGG S EEQGF
Sbjct: 431 TSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGF 490
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +
Sbjct: 491 RLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVT 550
Query: 433 NLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
NLKP+NED E +EK + YR T MF+ATMPPAVERLAR YLR P +V IG+ GK
Sbjct: 551 NLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAMVYIGSVGK 610
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
TE Q V +M E++K +L +L + I+FVN KK AD++A+ L+K+G+ TL
Sbjct: 611 PTERTEQIVHIMGEADKRRKLMEILHRGVEPPVIIFVNQKKGADVLARGLEKIGFNACTL 670
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK QEQRE +L + ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGR
Sbjct: 671 HGGKGQEQREYALASLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGR 730
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPR 663
TGRAGK G+A +F T D+ +FYDLKQ ++ S S PPEL H ++ KPGT+ + R
Sbjct: 731 TGRAGKAGLAISFCTKDDSHLFYDLKQTILGSPISTCPPELLNHPEAQHKPGTVVTK-KR 789
Query: 664 RNDTVFA 670
R + +FA
Sbjct: 790 REEKIFA 796
>gi|193641157|ref|XP_001946607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Acyrthosiphon pisum]
Length = 721
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 326/590 (55%), Positives = 419/590 (71%), Gaps = 21/590 (3%)
Query: 92 RERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
+++E+E E I+E+YLG K K+RV + +++ +F FDW+ +EDTS D NALY+ H+ Q
Sbjct: 142 KDKEKEQEAIRERYLGLTKKKRRVRRLNDR-KFVFDWDASEDTSIDYNALYKERHQVQF- 199
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDM 211
FGRG AG+D + QKK +K E+ E+ R+ E +E+ + ++E +D
Sbjct: 200 FGRGNVAGIDIKAQKKDQSKFYGELMEK-RRTEAEKEQEKVRLKKVKRKEDKQKWD---- 254
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
DRHWSEK+L+EMTERDWRIFRED+NI+ KG +IP P+R W E + E++ +E+VGY
Sbjct: 255 --DRHWSEKELDEMTERDWRIFREDYNITIKGGRIPEPIRKWKESTIKSEIMEIIEKVGY 312
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYA 330
K P+PIQ AIP+G Q RD+IG+AETGSGKT A+++P++ +I LP + EE+ +GPY+
Sbjct: 313 KEPTPIQRQAIPIGFQNRDIIGVAETGSGKTLAYLIPLIEWIQSLPKMEREEDVDQGPYS 372
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
+++APTRELAQQIEEET+KF LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID
Sbjct: 373 IILAPTRELAQQIEEETLKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLID 432
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI-- 448
LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+NED E DE ++
Sbjct: 433 VLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAE-DESKLLA 491
Query: 449 -------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
YR T MF+ATMPPAVERLAR YLR P VV IG+ GK E Q V MM E++K
Sbjct: 492 NYYTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGKPVERTEQIVHMMSENDK 551
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
RL +L D I+FVN KK AD++AK L+KLGY TLHGGK QEQRE +L +
Sbjct: 552 RKRLIEILSRKVDPPIIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREFALASLK 611
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
++LVATDV GRGIDI DV+ VINYDM +IE YTHRIGRTGRAGKTGVA +FLT
Sbjct: 612 GGVKDILVATDVVGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKTGVAISFLTKD 671
Query: 622 DTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
D+ +FYDLKQ++ S S PPELA H ++ KPGT+ RR + +FA
Sbjct: 672 DSPLFYDLKQVIQASPASTCPPELANHPEAQHKPGTVMMPKKRREEKIFA 721
>gi|195484183|ref|XP_002090584.1| GE13195 [Drosophila yakuba]
gi|194176685|gb|EDW90296.1| GE13195 [Drosophila yakuba]
Length = 821
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 344/689 (49%), Positives = 452/689 (65%), Gaps = 45/689 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ----THGRNSSDSRDRERER 69
KP+FLTK QR A++RRQE++ +Q+ + ++ ++ + G +
Sbjct: 146 KPVFLTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMASGAPPPAIM 205
Query: 70 HRREREEEAKARERA---------------RLEKLAERERERELELIKEQYLGSKKPKKR 114
+ + + R E L +++E+ELE I+E+YLG K K+R
Sbjct: 206 APPPKPDRRERGGGRDRGDRNDRGDRGDDKRAEDLTHKDKEKELEAIRERYLGIIKKKRR 265
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK 174
V + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K
Sbjct: 266 VRRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSKFYG 323
Query: 175 EMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFR 234
++ E+ R + E++ +K KE+ +D DRHWSEK +EMTERDWRIFR
Sbjct: 324 DLLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKDNDEMTERDWRIFR 376
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED+N++ KG +IP P+R+W+E E++ +++VGYK P+PIQ AIP+GLQ RD+IG+
Sbjct: 377 EDYNVTIKGGRIPNPIRSWSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 436
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
AETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET KF
Sbjct: 437 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQP 496
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRM
Sbjct: 497 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRM 556
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---------KRIYRTTYMFSATMPPAVE 464
IDMGFEP V +L+ MP +NLKP+ E+ E DE K+ YR T MF+ATMPPAVE
Sbjct: 557 IDMGFEPDVQKILEYMPVTNLKPDTEEAE-DETKLMENFYTKKKYRQTVMFTATMPPAVE 615
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
RLAR YLR P V IG+ GK TE Q V MM E++K +L +L D I+FVN K
Sbjct: 616 RLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQK 675
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+
Sbjct: 676 KGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVS 735
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---P 641
VINYDM IE YTHRIGRTGRAGKTG A +F+T D+ +FYDLKQ + S SPV P
Sbjct: 736 LVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCV--SASPVSTCP 793
Query: 642 PELAKHEASKFKPGTIPDRPPRRNDTVFA 670
PEL H ++ KPGT+ + RR + +FA
Sbjct: 794 PELMNHPEAQHKPGTVVTK-KRREEKIFA 821
>gi|24584994|ref|NP_609888.2| CG10333 [Drosophila melanogaster]
gi|22946759|gb|AAF53680.2| CG10333 [Drosophila melanogaster]
gi|60677727|gb|AAX33370.1| RH55640p [Drosophila melanogaster]
Length = 822
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 349/689 (50%), Positives = 456/689 (66%), Gaps = 45/689 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDS----------- 62
KP+FLTK QR A++RRQE++ +Q+ + ++ ++ + +
Sbjct: 147 KPVFLTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMASGAPPPAIV 206
Query: 63 -----RDRERERHRREREEEAKARERA---RLEKLAERERERELELIKEQYLGSKKPKKR 114
DR R+R + ER R E L +++E+ELE I+E+YLG K K+R
Sbjct: 207 APPPKPDRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKELEAIRERYLGIIKKKRR 266
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK 174
V + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K
Sbjct: 267 VRRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSKFYG 324
Query: 175 EMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFR 234
++ E+ R + E++ +K KE+ +D DRHWSEK+ +EMTERDWRIFR
Sbjct: 325 DLLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKENDEMTERDWRIFR 377
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED+N++ KG +IP P+R+W E E++ +++VGYK P+PIQ AIP+GLQ RD+IG+
Sbjct: 378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
AETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET KF
Sbjct: 438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQP 497
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRM
Sbjct: 498 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRM 557
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---------KRIYRTTYMFSATMPPAVE 464
IDMGFEP V +L+ MP +NLKP+ E+ E DE K+ YR T MF+ATMPPAVE
Sbjct: 558 IDMGFEPDVQKILEYMPVTNLKPDTEEAE-DETKLMENFYTKKKYRQTVMFTATMPPAVE 616
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
RLAR YLR P V IG+ GK TE Q V MM E++K +L +L D I+FVN K
Sbjct: 617 RLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQK 676
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+
Sbjct: 677 KGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVS 736
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---P 641
VINYDM IE YTHRIGRTGRAGKTG A +F+T D+ +FYDLKQ + S SPV P
Sbjct: 737 LVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCV--SASPVSTCP 794
Query: 642 PELAKHEASKFKPGTIPDRPPRRNDTVFA 670
PEL H ++ KPGT+ + RR + +FA
Sbjct: 795 PELMNHPEAQHKPGTVVTK-KRREEKIFA 822
>gi|194880138|ref|XP_001974373.1| GG21122 [Drosophila erecta]
gi|190657560|gb|EDV54773.1| GG21122 [Drosophila erecta]
Length = 816
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 349/689 (50%), Positives = 456/689 (66%), Gaps = 45/689 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDS----------- 62
KP+FLTK QR A++RRQE++ +Q+ + ++ ++ + +
Sbjct: 141 KPVFLTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMASGAPPPAIM 200
Query: 63 -----RDRERERHRREREEEAKARERA---RLEKLAERERERELELIKEQYLGSKKPKKR 114
DR R+R + ER R E L +++E+ELE I+E+YLG K K+R
Sbjct: 201 APPPKPDRRERGGGRDRGDRNDRGERGDDKRAEDLTHKDKEKELEAIRERYLGIIKKKRR 260
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK 174
V + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K
Sbjct: 261 VRRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSKFYG 318
Query: 175 EMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFR 234
++ E+ R + E++ +K KE+ +D DRHWSEK +EMTERDWRIFR
Sbjct: 319 DLLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKDNDEMTERDWRIFR 371
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED+N++ KG +IP P+R+W+E E++ +++VGYK P+PIQ AIP+GLQ RD+IG+
Sbjct: 372 EDYNVTIKGGRIPNPIRSWSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 431
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
AETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET KF
Sbjct: 432 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQP 491
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRM
Sbjct: 492 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRM 551
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---------KRIYRTTYMFSATMPPAVE 464
IDMGFEP V +L+ MP +NLKP+ E+ E DE K+ YR T MF+ATMPPAVE
Sbjct: 552 IDMGFEPDVQKILEYMPVTNLKPDTEEAE-DETKLMENFYTKKKYRQTVMFTATMPPAVE 610
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
RLAR YLR P V IG+ GK TE Q V MM E++K +L +L D I+FVN K
Sbjct: 611 RLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQK 670
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+
Sbjct: 671 KGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVS 730
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---P 641
VINYDM IE YTHRIGRTGRAGKTG A +F+T D+ +FYDLKQ + S SPV P
Sbjct: 731 LVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCV--SASPVSTCP 788
Query: 642 PELAKHEASKFKPGTIPDRPPRRNDTVFA 670
PEL H ++ KPGT+ + RR + +FA
Sbjct: 789 PELMNHPEAQHKPGTVVTK-KRREEKIFA 816
>gi|195344854|ref|XP_002038991.1| GM17282 [Drosophila sechellia]
gi|194134121|gb|EDW55637.1| GM17282 [Drosophila sechellia]
Length = 822
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 347/688 (50%), Positives = 454/688 (65%), Gaps = 43/688 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDS----------- 62
KP+FLTK QR A++RRQE++ +Q+ + ++ ++ + +
Sbjct: 147 KPVFLTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMASGAPPPAIV 206
Query: 63 -----RDRERERHRREREEEAKARERA---RLEKLAERERERELELIKEQYLGSKKPKKR 114
DR R+R + ER R E L +++E+ELE I+E+YLG K K+R
Sbjct: 207 APPPKPDRRERGGGRDRGDRNDRGERGDDKRAEDLTHKDKEKELEAIRERYLGIIKKKRR 266
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK 174
V + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+ +K
Sbjct: 267 VRRLNDR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-FGRGNVAGIDIKEQKRTQSKFYG 324
Query: 175 EMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFR 234
++ E+ R + E++ +K KE+ +D DRHWSEK+ +EMTERDWRIFR
Sbjct: 325 DLLEKRRTEAEKEQEKVRLKKMKRKEDKQK-WD------DRHWSEKENDEMTERDWRIFR 377
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED+N++ KG +IP P+R+W E E++ +++VGYK P+PIQ AIP+GLQ RD+IG+
Sbjct: 378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
AETGSGKT AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET KF
Sbjct: 438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQP 497
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRM
Sbjct: 498 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRM 557
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENED--------EELDEKRIYRTTYMFSATMPPAVER 465
IDMGFEP V +L+ MP +NLKP+ E+ E K+ YR T MF+ATMPPAVER
Sbjct: 558 IDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYSKKKYRQTVMFTATMPPAVER 617
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LAR YLR P V IG+ GK TE Q V MM E++K +L +L D I+FVN KK
Sbjct: 618 LARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQKK 677
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD++AK L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+
Sbjct: 678 GADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSL 737
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---PP 642
VINYDM IE YTHRIGRTGRAGKTG A +F+T D+ +FYDLKQ + S SPV PP
Sbjct: 738 VINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCV--SASPVSTCPP 795
Query: 643 ELAKHEASKFKPGTIPDRPPRRNDTVFA 670
EL H ++ KPGT+ + RR + +FA
Sbjct: 796 ELMNHPEAQHKPGTVVTK-KRREEKIFA 822
>gi|145351197|ref|XP_001419971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580204|gb|ABO98264.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 575
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 311/563 (55%), Positives = 408/563 (72%), Gaps = 18/563 (3%)
Query: 100 LIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAG 159
++K QY+G K+V K + + +F FDW EDTSRD+N LY PHE +FGRG G
Sbjct: 1 MLKRQYMGGDAKSKKV-KTANRGKFVFDWRKEEDTSRDLNPLYDRPHEVAPMFGRGMIGG 59
Query: 160 MDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEE-------AADLYDTFDMR 212
+DRREQ + A+ E+E+ + RK G ++ + ++++ E A +L TF
Sbjct: 60 VDRREQARSNAERERELIVKSRKDLGSKDAAGDVRKMEVERERKRKDVEARELKRTFK-- 117
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAVERVGY 271
HWS+KKLE+MTERDWRIFREDFNISYKG K+P PMR W E P E+LRA+ +VGY
Sbjct: 118 --EHWSDKKLEDMTERDWRIFREDFNISYKGGKLPLPMRAWKECTSLPQEILRAIAQVGY 175
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
+ PSPIQMA+IP+GL +RDVIGIAETGSGKT AFV+PML +I +LP +++E A GPYA+
Sbjct: 176 EKPSPIQMASIPIGLLKRDVIGIAETGSGKTCAFVVPMLAHIMQLPKMTDEIAAHGPYAL 235
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
+MAPTRELAQQIEEET+KFA YL +V +VGGQSIE+QGF++R+G E+++ TPGR+ID
Sbjct: 236 IMAPTRELAQQIEEETLKFAQYLDYRVGLVVGGQSIEDQGFKLRKGVEILVGTPGRIIDV 295
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ERRY VL+QCNY+VLDEADRMIDMGFEPQVV V++AM S NLKPE+E EELD + + +
Sbjct: 296 IERRYTVLSQCNYIVLDEADRMIDMGFEPQVVAVMEAMGSGNLKPEDEAEELDGQALEQ- 354
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
VERLAR YLRNP VVTIG+AGK ++LI Q ++ + +E+ S+ + +L
Sbjct: 355 ----GGPTSSNVERLARSYLRNPAVVTIGSAGKTSDLIKQEIIWVSRNERDSKFELVLSR 410
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ AIVFVN K++ D VA +LGY ++HGGKSQ+QRE SL GF+ Y++LVAT
Sbjct: 411 HPNTQAIVFVNAKRSVDAVANLCYRLGYSCASIHGGKSQDQREESLRGFKAGDYDILVAT 470
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
DVAGRGID+ + V+NY++P IE YTHRIGRTGRAG+ G A +FLT D D+ Y+LK+
Sbjct: 471 DVAGRGIDVKGIDLVVNYELPHTIENYTHRIGRTGRAGRKGTAVSFLTSDDRDIMYELKE 530
Query: 632 MLIQSNSPVPPELAKHEASKFKP 654
+LI+S + VP LA HEA++ KP
Sbjct: 531 LLIESKNHVPDALANHEAARVKP 553
>gi|291225666|ref|XP_002732826.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23-like
[Saccoglossus kowalevskii]
Length = 768
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 341/681 (50%), Positives = 454/681 (66%), Gaps = 43/681 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRR-----------QEQQQQLLSQPQTHGRNSSDS 62
KP FLTK +R +LAL +RQ+ + +Q+R+ Q+Q Q P R
Sbjct: 108 KPKFLTKEERAKLALAKRQKDVEEQRRKSDIDRKKQMDFQKQAQMSYEDPYERERRERRE 167
Query: 63 RDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKF 122
+ + +E KA++ ER+ E+EL+ IK++YLG K KKR+ + +++
Sbjct: 168 KRERERERDMDEDEREKAKQ--------ERDGEKELQSIKDRYLGMVKKKKRIRRLNDR- 218
Query: 123 RFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK 182
+F FDW+ TEDTS+D N LY+ H+ QL +GRG AG+D + QKK K E+ EE R
Sbjct: 219 KFVFDWDPTEDTSQDYNPLYKEKHQIQL-YGRGHIAGIDLKAQKKDKCKFYGELLEERRT 277
Query: 183 KEGVEEKPEEAAALKLKEEAADL--YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
++EK +E K +++ +D DRHWS+K +EEM ERDWRIFRED+NI+
Sbjct: 278 ---IQEKEQELTRQKKEKQKEAKQRWD------DRHWSQKTIEEMQERDWRIFREDYNIA 328
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
KG +IP P+R+W E L ++ ++ +GYK P+PIQ AIP+GLQ RDVIG+AETGSG
Sbjct: 329 TKGGRIPLPIRSWTEAGLPDYIIDVIDSMGYKEPTPIQRQAIPIGLQNRDVIGVAETGSG 388
Query: 301 KTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVV 359
KTAAF++P+L +IS LP I+ +E+ +GPYAV++APTRELAQQIE ET+ F LGI+ V
Sbjct: 389 KTAAFLIPLLVWISSLPKIARQEDVDQGPYAVILAPTRELAQQIEAETINFGKPLGIRTV 448
Query: 360 SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
SI+GG S E+QGF++R GCE+VIATPGRLID LE RY VLNQC YVVLDEADRMIDMGFE
Sbjct: 449 SIIGGISREDQGFKLRMGCEIVIATPGRLIDVLENRYLVLNQCTYVVLDEADRMIDMGFE 508
Query: 420 PQVVGVLDAMPSSNLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYL 471
P V +L+ +P SN KP+ +D E +K + YR T MF+ATMPP VER+AR YL
Sbjct: 509 PDVQHILEYLPVSNQKPDTDDAEDHDKLLANFASKHKYRQTVMFTATMPPPVERIARNYL 568
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+ GK + + Q V M+K+ EK +L LL+ + + FVN KK D++A
Sbjct: 569 RRPAVVHIGSVGKPVDRVEQVVYMVKQQEKRQKLVHLLEAGFEPPVMTFVNQKKGCDVLA 628
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TTLHGGKSQEQRE +L + ++LV TDVAGRGIDI DV+ VINYDM
Sbjct: 629 KSLEKMGYNATTLHGGKSQEQREFALASLKNGDKDILVCTDVAGRGIDIKDVSMVINYDM 688
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEAS 650
NIE YTHRIGRTGRAGKTG+A + +T D V YDLK L+ S S PPELA H +
Sbjct: 689 AKNIEDYTHRIGRTGRAGKTGLAVSLVTPDDKMVMYDLKHCLLASPASTCPPELANHPDA 748
Query: 651 KFKPGTIPDRPPRRNDTVFAH 671
+ KPGT+ + R+ +T++ +
Sbjct: 749 QHKPGTVMSK-KRKEETLYVN 768
>gi|390339167|ref|XP_789805.2| PREDICTED: probable ATP-dependent RNA helicase DDX23
[Strongylocentrotus purpuratus]
Length = 785
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 346/669 (51%), Positives = 455/669 (68%), Gaps = 29/669 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK QR +LALE+RQ Q+ Q++ E+ +Q + + +S+ + R RRE
Sbjct: 133 KPKFLTKEQRAKLALEKRQAQVEAQRKALEENRQKQVDFEKMAQQASEDPREKERRERRE 192
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
R A + L R+ +E + IK++YLG K K+RV + +++ +F FDW+ ED
Sbjct: 193 RRMREDAGDEENLS----RDELKEKQAIKDRYLGGVKKKRRVRRLNDR-KFVFDWDAGED 247
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N LY++ H+ QL +GRG AG+D + QKK + N++ + + R+ E +EK +E
Sbjct: 248 TSADFNPLYRDNHQIQL-YGRGSIAGIDIKAQKKQSKFNQEVV--DTRRTE--QEKDQEK 302
Query: 194 AALKLKEEAAD--LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
+ LK ++ D +YD +RHW +KKL EM +RDWRIFREDFNIS KG IP P+R
Sbjct: 303 SRLKKQKNREDKLIYD------ERHWKQKKLLEMKDRDWRIFREDFNISTKGGHIPHPIR 356
Query: 252 NWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLT 311
W E L + + VGYK+PSPIQ AIP+GLQ RDVIG+AETGSGKTAAF++P+L
Sbjct: 357 FWDEYGLPKHITDIIAEVGYKDPSPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLIPLLV 416
Query: 312 YISRLPPIS-EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
+IS LP I +E++ +GPYA+++APTRELAQQIEEET+KF LGI+ V+I+GG S E+Q
Sbjct: 417 WISTLPKIERDEDKDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVTIIGGISREDQ 476
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
GF++R GCE+VIATPGRLID LE RY VL QC YVVLDEADRMIDMGFEP V +L+ +P
Sbjct: 477 GFKLRLGCEIVIATPGRLIDVLENRYLVLCQCTYVVLDEADRMIDMGFEPDVQKILEYLP 536
Query: 431 SSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA 482
+N KP++E+ E K+ YR T MF+ATMP AVER+AR YLR P VV IG+
Sbjct: 537 VTNQKPDSEEAEDSAKLLANFASKKKYRQTVMFTATMPTAVERVARSYLRRPAVVYIGSI 596
Query: 483 GKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVT 542
GK E + Q V M EK +L +LL++ D ++FVN KK D +AK L+K+G+ T
Sbjct: 597 GKPVESVQQLVYMTSNQEKRQKLIQLLEKGIDPPVLIFVNQKKRVDALAKRLEKMGFNAT 656
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
TLHGGKSQEQRE +L + ++LVATDVAGRGIDI DV+ VIN+DM NIE YTHRI
Sbjct: 657 TLHGGKSQEQREYALASLKAGLKDILVATDVAGRGIDIKDVSVVINFDMAKNIEDYTHRI 716
Query: 603 GRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPGTIPDRP 661
GRTGRAGKTG A +FLT D+ +FYDLK +L S S PPELA H ++ KPGTI R
Sbjct: 717 GRTGRAGKTGTAVSFLTPDDSAIFYDLKNVLSASTTSSCPPELASHPDAQNKPGTIMQR- 775
Query: 662 PRRNDTVFA 670
R+++ +F
Sbjct: 776 KRKDEKIFV 784
>gi|405972018|gb|EKC36815.1| Putative ATP-dependent RNA helicase DDX23 [Crassostrea gigas]
Length = 778
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 350/672 (52%), Positives = 472/672 (70%), Gaps = 28/672 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQ----QLLSQPQTHGRNSSDSRDRERER 69
KP FLTK +R AL+RRQE + +Q+R+QE+++ + L+Q + R R+R
Sbjct: 117 KPKFLTKEERAAEALKRRQEAVEEQRRKQEEEKKKQLEYLNQGREDDRYRDRRDRDRRDR 176
Query: 70 HRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWE 129
RRERE E + E+ + + +++ERE IKE+YLG K K+R+ + +++ +F FDW+
Sbjct: 177 ERREREREREEGEKNSV--IEYKDKEREQAAIKERYLGIMKKKRRIRRLNDR-KFVFDWD 233
Query: 130 NTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEK 189
+DTS+D N LY++ H Q FGRG AG+D + QKK +K E+ E+ R E E++
Sbjct: 234 AGDDTSQDYNFLYKDRHTVQF-FGRGHIAGIDIKAQKKDQSKFYGELLEKRRTAEEKEQE 292
Query: 190 PEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRP 249
+ L K+EA +D DRHWSEK L+EM ERDWRIF+ED+NIS KG +IP P
Sbjct: 293 KKHQKNL-AKKEAKQKWD------DRHWSEKNLDEMAERDWRIFKEDYNISCKGGRIPNP 345
Query: 250 MRNWAE-GKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
+R+W E G L E+L +E GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF+ P
Sbjct: 346 IRSWRESGLLQKEILEVIEIAGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLFP 405
Query: 309 MLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSI 367
+L +I+ LP + +++ +GPYA+++APTRELAQQIEEET+KFA +L I+ V+I+GG S
Sbjct: 406 LLKWITSLPKLERFDDQDQGPYAIILAPTRELAQQIEEETIKFAKHLDIRTVAIIGGISR 465
Query: 368 EEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD 427
EEQGF++RQGCE+VIATPGRLID LE RY VL QC YVV+DEADRMIDMGFEP V +L+
Sbjct: 466 EEQGFKLRQGCEIVIATPGRLIDVLENRYLVLAQCTYVVMDEADRMIDMGFEPDVQKILE 525
Query: 428 AMPSSNLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
+P SN KP+N+D E D+K + YR T MF+ATMPPAVERLAR YLR P +V I
Sbjct: 526 YLPVSNQKPDNDDAEDDQKMLQNFSSKKKYRQTVMFTATMPPAVERLARSYLRRPAMVYI 585
Query: 480 GTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGY 539
G+ GK TE Q V M+ +EK +L ++L++ + I+FVN KK AD++AK+L+K+GY
Sbjct: 586 GSVGKPTERTEQIVYMVSPAEKRKKLVQILEQGIEPPIIIFVNQKKGADVLAKSLEKMGY 645
Query: 540 RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 599
TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ VINYDM +IE YT
Sbjct: 646 NACTLHGGKGQEQREFALASLKGGTKDILVATDVAGRGIDIKDVSLVINYDMAKSIEDYT 705
Query: 600 HRIGRTGRAGKTGVATTFLTF-HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTI 657
HRIGRTGRAGKTG+A +F++ HD+ V YDLKQ+++ S S PPELA H ++ KPG +
Sbjct: 706 HRIGRTGRAGKTGIAISFVSAEHDSAVLYDLKQLIMASPVSNCPPELANHPDAQNKPGAV 765
Query: 658 PDRPPRRNDTVF 669
+ R+++T+F
Sbjct: 766 VQK-KRKDETIF 776
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 632 bits (1629), Expect = e-178, Method: Compositional matrix adjust.
Identities = 348/688 (50%), Positives = 456/688 (66%), Gaps = 42/688 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQ---------------------QKRRQEQQQQLLSQP 52
KP+F+TK QR AL+RRQE++A + +++ ++ +
Sbjct: 138 KPVFITKEQRAAEALKRRQEEVAAMRAGASVGVPKFGDVPVTTLLNREKKDPLEKYDRRE 197
Query: 53 QTHGRNSSDSRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPK 112
+ R +RDRERER +E++ + R R+ E +++E+E E I+E+YLG K K
Sbjct: 198 RERERERERARDRERERDGKEKDRDDDKR-RSTTEDTTVKDKEKEQEAIRERYLGIVKKK 256
Query: 113 KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKN 172
+RV + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D ++QK+ +K
Sbjct: 257 RRVRRLNDR-KFVFDWDAAEDTSIDYNNLYKERHHVQF-FGRGNIAGIDIKDQKRKQSKF 314
Query: 173 EKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRI 232
++ E+ R+ + +E+ + K+E +D DRHWSEK +EMTERDWRI
Sbjct: 315 YGDLLEK-RRTDAEKEQEKVRLKKVKKKEDKQKWD------DRHWSEKDCDEMTERDWRI 367
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRED+NI+ KG KIP P R+W+E E+L +++VGYK P+PIQ AIP+GLQ RD+I
Sbjct: 368 FREDYNITIKGGKIPNPFRSWSETGFPKEILDIIDKVGYKEPTPIQRQAIPIGLQNRDII 427
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
GIAETGSGKT AF++P+LT+I LP I E +GPYA+++APTRELAQQIEEET KF
Sbjct: 428 GIAETGSGKTLAFLIPLLTWIQSLPKIDRLETADQGPYAIILAPTRELAQQIEEETQKFG 487
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEAD
Sbjct: 488 QPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEAD 547
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENED--------EELDEKRIYRTTYMFSATMPPAV 463
RMIDMGFEP V +L+ MP +NLKP+ E+ E + K+ YR T MF+ATMPPAV
Sbjct: 548 RMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATMPPAV 607
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNT 523
ERLAR YLR P V IG+ GK TE Q V +M E+EK +L +L + I+FVN
Sbjct: 608 ERLARTYLRRPATVYIGSVGKPTERTEQIVHIMTENEKRKKLMEILSRGVEPPCIIFVNQ 667
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
KK AD++AK L+KLGY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV
Sbjct: 668 KKGADVLAKGLEKLGYNACTLHGGKGQEQREYALASLKNGSKDILVATDVAGRGIDIKDV 727
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPP 642
+ VINYDM IE YTHRIGRTGRAGKTG A +F T D+ +FYDLKQ+++ S S PP
Sbjct: 728 SLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFCTKDDSHLFYDLKQIVVASPVSVCPP 787
Query: 643 ELAKHEASKFKPGTIPDRPPRRNDTVFA 670
EL H ++ KPGT+ + RR + +FA
Sbjct: 788 ELMNHPDAQHKPGTVVTK-KRREEKIFA 814
>gi|195579916|ref|XP_002079802.1| GD24145 [Drosophila simulans]
gi|194191811|gb|EDX05387.1| GD24145 [Drosophila simulans]
Length = 641
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/599 (54%), Positives = 420/599 (70%), Gaps = 26/599 (4%)
Query: 85 RLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
R E L +++E+ELE I+E+YLG K K+RV + +++ +F FDW+ EDTS D N LY+
Sbjct: 56 RAEDLTHKDKEKELEAIRERYLGIIKKKRRVRRLNDR-KFVFDWDAGEDTSIDYNNLYKE 114
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
H Q FGRG AG+D +EQK+ +K ++ E+ R + E++ +K KE+
Sbjct: 115 RHHVQF-FGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQK 173
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
+D DRHWSEK+ +EMTERDWRIFRED+N++ KG +IP P+R+W E E++
Sbjct: 174 -WD------DRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIID 226
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-EN 323
+++VGYK P+PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L++I LP I E+
Sbjct: 227 IIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLED 286
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+GPYA++MAPTRELAQQIEEET KF LGI+ V +VGG S EEQGFR+R GCE+VIA
Sbjct: 287 VDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIA 346
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E
Sbjct: 347 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAE- 405
Query: 444 DEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV 494
DE ++ YR T MF+ATMPPAVERLAR YLR P V IG+ GK TE Q V
Sbjct: 406 DETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVY 465
Query: 495 MMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
MM E++K +L +L D I+FVN KK AD++AK L+KLGY TLHGGK QEQRE
Sbjct: 466 MMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQRE 525
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGRTGRAGKTG A
Sbjct: 526 YALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCA 585
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPV---PPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+F+T D+ +FYDLKQ + S SPV PPEL H ++ KPGT+ + RR + +FA
Sbjct: 586 ISFVTKDDSALFYDLKQCV--SASPVSTCPPELMNHPEAQHKPGTVVTK-KRREEKIFA 641
>gi|16768302|gb|AAL28370.1| GM01081p [Drosophila melanogaster]
Length = 641
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 328/599 (54%), Positives = 420/599 (70%), Gaps = 26/599 (4%)
Query: 85 RLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
R E L +++E+ELE I+E+YLG K K+RV + +++ +F FDW+ EDTS D N LY+
Sbjct: 56 RAEDLTHKDKEKELEAIRERYLGIIKKKRRVRRLNDR-KFVFDWDAGEDTSIDYNNLYKE 114
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
H Q FGRG AG+D +EQK+ +K ++ E+ R + E++ +K KE+
Sbjct: 115 RHHVQF-FGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQK 173
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
+D DRHWSEK+ +EMTERDWRIFRED+N++ KG +IP P+R+W E E++
Sbjct: 174 -WD------DRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIID 226
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-EN 323
+++VGYK P+PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L++I LP I E+
Sbjct: 227 IIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLED 286
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+GPYA++MAPTRELAQQIEEET KF LGI+ V +VGG S EEQGFR+R GCE+VIA
Sbjct: 287 VDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIA 346
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+ E+ E
Sbjct: 347 TPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAE- 405
Query: 444 DEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV 494
DE ++ YR T MF+ATMPPAVERLAR YLR P V IG+ GK TE Q V
Sbjct: 406 DETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVY 465
Query: 495 MMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
MM E++K +L +L D I+FVN KK AD++AK L+KLGY TLHGGK QEQRE
Sbjct: 466 MMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQRE 525
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L ++ ++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGRTGRAGKTG A
Sbjct: 526 YALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCA 585
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPV---PPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+F+T D+ +FYDLKQ + S SPV PPEL H ++ KPGT+ + RR + +FA
Sbjct: 586 ISFVTKDDSALFYDLKQCV--SASPVSTCPPELMNHPEAQHKPGTVVTK-KRREEKIFA 641
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 325/609 (53%), Positives = 431/609 (70%), Gaps = 30/609 (4%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E+ R++ R+EK ++ +EL IKE+YLG K +KR +++ +F F+W+ +EDTS
Sbjct: 210 EDDGERQKLRVEK----DKSKELHAIKERYLGGIKKRKRTRHLNDR-KFVFEWDASEDTS 264
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
D N +Y+ H+ QL +GRGF AG+D ++QK+ ++ ++ E K+ +EEK +E
Sbjct: 265 VDYNPIYKEKHQVQL-YGRGFIAGIDLKQQKREQSRFYGDLME---KRRTLEEKEQEETR 320
Query: 196 LK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
LK K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG KIP P+RNW
Sbjct: 321 LKKMRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRNW 374
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E L +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I
Sbjct: 375 KEYSLPDHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI 434
Query: 314 SRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I E+ +GPYAV++APTRELAQQIEEET+KF LGI+ V+++GG S E+QGF
Sbjct: 435 TTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 494
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID L+ RY VL++C YVVLDEADRMIDMGFEP V +L+ +P +
Sbjct: 495 RLRMGCEIVIATPGRLIDVLDNRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEFIPVT 554
Query: 433 NLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 483
N KP+ E+ E +K + YR T MF+ATMPPAVERLAR YLR P VV IG+AG
Sbjct: 555 NQKPDTEEAEDPDKMMMNFESGKNKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG 614
Query: 484 KATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGY-RVT 542
K E + Q V++M E EK +L +L + I+FVN KK D++AK+L+K+G
Sbjct: 615 KPHERVEQKVLLMSEGEKRKKLLEVLSHGFEPPIIIFVNQKKGCDVLAKSLEKMGVIHAC 674
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE Y HRI
Sbjct: 675 TLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVVNYDMAKNIEDYIHRI 734
Query: 603 GRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRP 661
GRTGRAGK+GVA TFLT D+ VFYDLKQ +++S S PPEL H ++ KPGTI +
Sbjct: 735 GRTGRAGKSGVALTFLTKEDSAVFYDLKQAILESPVSTCPPELTNHPDAQHKPGTILTK- 793
Query: 662 PRRNDTVFA 670
RR +T+FA
Sbjct: 794 KRREETIFA 802
>gi|308808636|ref|XP_003081628.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
gi|116060093|emb|CAL56152.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
Length = 592
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/571 (56%), Positives = 412/571 (72%), Gaps = 17/571 (2%)
Query: 100 LIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFR 157
++K QY+G K+ KP ++ R F FDW EDTSRD+N LY PHE +FGRG
Sbjct: 1 MLKRQYMGEDASVKKP-KPVQQHRGKFLFDWRKEEDTSRDLNPLYDRPHEVAPMFGRGML 59
Query: 158 AGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRV---D 214
AG+DRREQ + A E+E+ + RK G + + L + + +
Sbjct: 60 AGVDRREQARSNAGRERELMIKARKDMGSSDAAGDVRKLDAERDRRRKEAEEREQARTFK 119
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAVERVGYKN 273
HWS+KKLE+MTERDWRIFREDFNISYKG ++P PMR W E P E+LRA+E+VGY
Sbjct: 120 EHWSDKKLEDMTERDWRIFREDFNISYKGGRLPLPMRAWDECAGLPKEILRAIEKVGYVK 179
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
PSPIQMA+IP+GL +RDVIGIAETGSGKT AFV+PML +I +LP +++E A GPYA++M
Sbjct: 180 PSPIQMASIPIGLLKRDVIGIAETGSGKTCAFVVPMLAHIMQLPKMTDEIAAHGPYALIM 239
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIEEET+KFA +L +V +VGGQSIE+QGF++R+G E+++ TPGR+ID ++
Sbjct: 240 APTRELAQQIEEETLKFAQFLNYRVALVVGGQSIEDQGFKLRKGVEILVGTPGRIIDVID 299
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI----- 448
RRY VL+QCNY+VLDEADRMIDMGFEPQV V+++M S NLKPE+E E LD + +
Sbjct: 300 RRYTVLSQCNYIVLDEADRMIDMGFEPQVNAVMESMGSGNLKPEDEAEALDAQALDAGAG 359
Query: 449 -----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFS 503
YRTTYMFSATMPP+VERLAR YLRNP VV IG+AGK ++LI Q V+ + + E+ S
Sbjct: 360 VASSKYRTTYMFSATMPPSVERLARSYLRNPAVVNIGSAGKTSDLIKQEVIWVAKHERDS 419
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+L+ +L + AIVFVN K++ D V +LGY ++HGGKSQ+QRE SL GF+
Sbjct: 420 KLELVLSRHTNTQAIVFVNAKRSVDAVQNLCYRLGYSCASIHGGKSQDQREESLRGFKAG 479
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
Y++LVATDVAGRGID+ ++ V+NY++P +IE YTHRIGRTGR G+ G A +FLT D
Sbjct: 480 EYDILVATDVAGRGIDVKNIDLVVNYELPHSIENYTHRIGRTGRGGRKGTAVSFLTQDDR 539
Query: 624 DVFYDLKQMLIQSNSPVPPELAKHEASKFKP 654
DV Y+LKQ+LI+S + VP LA HEASK KP
Sbjct: 540 DVMYELKQLLIESKNVVPDALANHEASKVKP 570
>gi|170040294|ref|XP_001847939.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167863866|gb|EDS27249.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 818
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 345/691 (49%), Positives = 450/691 (65%), Gaps = 44/691 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRD--------- 64
KP F+TK QR AL+RRQE++A K Q + + RD
Sbjct: 138 KPKFITKEQRAAEALKRRQEEVAAMKAAQASNVPKFGDVPVTALLNREKRDPLEKYDRRE 197
Query: 65 ---------------RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSK 109
RERE ++ E + K A +E+ +++E+E E I+E+YLG
Sbjct: 198 RERERERERMERIRNREREGKGKDGEGDDKVGRGAVVEENPVKDKEKETEAIRERYLGII 257
Query: 110 KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLA 169
K K+RV + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+
Sbjct: 258 KKKRRVRRLNDR-KFVFDWDAAEDTSVDYNNLYKERHHVQF-FGRGNIAGIDIKEQKRKQ 315
Query: 170 AKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERD 229
+K ++ E+ R+ + +E+ + K+E +D DRHWSEK+++EMTERD
Sbjct: 316 SKFYGDLLEK-RRTDAEKEQEKVRLKKVKKKEDKQKWD------DRHWSEKEVDEMTERD 368
Query: 230 WRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQR 289
WRIFRED+N++ KG KIP P+R+W E E+L +++VGYK P+PIQ AIP+GLQ R
Sbjct: 369 WRIFREDYNVTIKGGKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGLQNR 428
Query: 290 DVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTRELAQQIEEETV 348
D+IGIAETGSGKT AF++P+L +I LP I +E +GPYA+++APTRELAQQIEEET
Sbjct: 429 DIIGIAETGSGKTLAFLIPLLNWIQGLPKIERQETADQGPYAIILAPTRELAQQIEEETQ 488
Query: 349 KFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLD 408
KF LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+V+D
Sbjct: 489 KFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVMD 548
Query: 409 EADRMIDMGFEPQVVGVLDAMPSSNLKPENED--------EELDEKRIYRTTYMFSATMP 460
EADRMIDMGFEP V +L+ MP +NLKP+ E+ E + K+ YR T MF+ATMP
Sbjct: 549 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMFTATMP 608
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVF 520
PAVERLAR YLR P V IG+ GK TE Q V ++ E+EK +L +L + I+F
Sbjct: 609 PAVERLARTYLRRPATVYIGSVGKPTERTEQIVHIVTENEKRKKLMEILSRGVEPPCIIF 668
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
VN KK AD++AK L+KLGY TLHGGK QEQRE +L + ++LVATDVAGRGIDI
Sbjct: 669 VNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREYALASLKNGSKDILVATDVAGRGIDI 728
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SP 639
DV+ VINYDM IE YTHRIGRTGRAGKTG A +F T D+ +FYDLKQ+++ S S
Sbjct: 729 KDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFCTKDDSHLFYDLKQIIVASPVSS 788
Query: 640 VPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
PPEL H ++ KPGT+ + RR + +FA
Sbjct: 789 CPPELMNHPDAQHKPGTVVTK-KRREEKIFA 818
>gi|256088376|ref|XP_002580315.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230183|emb|CCD76354.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 793
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/674 (50%), Positives = 444/674 (65%), Gaps = 31/674 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER------ 67
KP F++K +R Q A++RRQ ++ Q+ +Q + QT + +R+R
Sbjct: 131 KPKFISKEERIQQAIQRRQAEVQAQREKQMDA----FKKQTEYLEGAKDLERKRRTEDFQ 186
Query: 68 ERHRREREEEAKARERARLEKLAER-ERERELELIKEQYLGSKKPKKRVIKPSEKFRFSF 126
ER R+ R ++ A+ E +++ +E + IKE+YLG K+ KR + + +F F
Sbjct: 187 ERMRQNRNFRNTSKRAAQGEVPSDKINNSQEEQAIKERYLGQKRLTKRRPRRLNERKFVF 246
Query: 127 DWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEG 185
DW+ +DTS+D N LY+ H+ Q FGRG G+D ++QKK + ++ E R +
Sbjct: 247 DWDVADDTSQDYNPLYKEKHQIQF-FGRGHIGGIDIKQQKKEIGRFYSKLLESRRSDTQK 305
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
V+EK + K EA +D DRHW+EK L++MTERDWRIFREDFNIS KG
Sbjct: 306 VQEKKRLSGVAK--REAKQKWD------DRHWTEKALDQMTERDWRIFREDFNISTKGGN 357
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+WAE + EL +++VGY P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 358 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 417
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I RLP + E+ +GPYA++MAPTRELAQQIEEETVKF LGIK VS++GG
Sbjct: 418 LIPLLNWIQRLPKLERLEDTEQGPYAIIMAPTRELAQQIEEETVKFGRPLGIKTVSLIGG 477
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+Q ++R G E+VI TPGRL D LE RY VLNQC Y+VLDEAD+MIDMGFEP+V
Sbjct: 478 LSREDQALKLRMGAEIVIGTPGRLNDVLENRYMVLNQCTYIVLDEADKMIDMGFEPEVNN 537
Query: 425 VLDAMPSSNLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVV 476
+L +P +N KP+NED E D K + YR T MF+ATMPPAVERLAR YLR P +
Sbjct: 538 ILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATMPPAVERLARSYLRRPAM 597
Query: 477 VTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK 536
V IG+AGK TE + Q V M+ E EK +L +L D I+FVN KK AD++AK L+K
Sbjct: 598 VYIGSAGKPTERVEQIVYMVSEQEKRRKLLEILAAGLDPPVIIFVNQKKGADVLAKGLEK 657
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
LGY LHGGK QEQRE +L ++ + +LVATDVAGRGIDI DV+ VINYDM I+
Sbjct: 658 LGYSAVVLHGGKGQEQREYALASLKSGQKEILVATDVAGRGIDIKDVSMVINYDMSKTID 717
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 655
Y HRIGRTGRAGK+G+A + LT D VFYDLKQ+LIQS S P ELA H ++ KPG
Sbjct: 718 EYVHRIGRTGRAGKSGIAISLLTKEDAPVFYDLKQLLIQSPVSTCPHELANHPDAQTKPG 777
Query: 656 TIPDRPPRRNDTVF 669
+ + R +TV+
Sbjct: 778 ILAAKKRRAEETVY 791
>gi|170029482|ref|XP_001842621.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
gi|167863205|gb|EDS26588.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
Length = 815
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 345/691 (49%), Positives = 450/691 (65%), Gaps = 44/691 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRD--------- 64
KP F+TK QR AL+RRQE++A K Q + + RD
Sbjct: 135 KPKFITKEQRAAEALKRRQEEVAAMKAAQASNVPKFGDVPVTALLNREKRDPLEKYDRRE 194
Query: 65 ---------------RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSK 109
RERE ++ E + K A +E+ +++E+E E I+E+YLG
Sbjct: 195 RERERERERMERIRNREREGKGKDGEGDDKVGRGAVVEENPVKDKEKETEAIRERYLGII 254
Query: 110 KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLA 169
K K+RV + +++ +F FDW+ EDTS D N LY+ H Q FGRG AG+D +EQK+
Sbjct: 255 KKKRRVRRLNDR-KFVFDWDAAEDTSVDYNNLYKERHHVQF-FGRGNIAGIDIKEQKRKQ 312
Query: 170 AKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERD 229
+K ++ E+ R+ + +E+ + K+E +D DRHWSEK+++EMTERD
Sbjct: 313 SKFYGDLLEK-RRTDAEKEQEKVRLKKVKKKEDKQKWD------DRHWSEKEVDEMTERD 365
Query: 230 WRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQR 289
WRIFRED+N++ KG KIP P+R+W E E+L +++VGYK P+PIQ AIP+GLQ R
Sbjct: 366 WRIFREDYNVTIKGGKIPNPIRSWKESGFPKEVLEIIDKVGYKEPTPIQRQAIPIGLQNR 425
Query: 290 DVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTRELAQQIEEETV 348
D+IGIAETGSGKT AF++P+L +I LP I +E +GPYA+++APTRELAQQIEEET
Sbjct: 426 DIIGIAETGSGKTLAFLIPLLNWIQGLPKIERQETADQGPYAIILAPTRELAQQIEEETQ 485
Query: 349 KFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLD 408
KF LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+V+D
Sbjct: 486 KFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVMD 545
Query: 409 EADRMIDMGFEPQVVGVLDAMPSSNLKPENED--------EELDEKRIYRTTYMFSATMP 460
EADRMIDMGFEP V +L+ MP +NLKP+ E+ E + K+ YR T MF+ATMP
Sbjct: 546 EADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDATKLMENFNTKKKYRQTVMFTATMP 605
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVF 520
PAVERLAR YLR P V IG+ GK TE Q V ++ E+EK +L +L + I+F
Sbjct: 606 PAVERLARTYLRRPATVYIGSVGKPTERTEQIVHIVTENEKRKKLMEILSRGVEPPCIIF 665
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
VN KK AD++AK L+KLGY TLHGGK QEQRE +L + ++LVATDVAGRGIDI
Sbjct: 666 VNQKKGADVLAKGLEKLGYNACTLHGGKGQEQREYALASLKNGSKDILVATDVAGRGIDI 725
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SP 639
DV+ VINYDM IE YTHRIGRTGRAGKTG A +F T D+ +FYDLKQ+++ S S
Sbjct: 726 KDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFCTKDDSHLFYDLKQIIVASPVSS 785
Query: 640 VPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
PPEL H ++ KPGT+ + RR + +FA
Sbjct: 786 CPPELMNHPDAQHKPGTVVTK-KRREEKIFA 815
>gi|256088378|ref|XP_002580316.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230182|emb|CCD76353.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 730
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/674 (50%), Positives = 444/674 (65%), Gaps = 31/674 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER------ 67
KP F++K +R Q A++RRQ ++ Q+ +Q + QT + +R+R
Sbjct: 68 KPKFISKEERIQQAIQRRQAEVQAQREKQMDA----FKKQTEYLEGAKDLERKRRTEDFQ 123
Query: 68 ERHRREREEEAKARERARLEKLAER-ERERELELIKEQYLGSKKPKKRVIKPSEKFRFSF 126
ER R+ R ++ A+ E +++ +E + IKE+YLG K+ KR + + +F F
Sbjct: 124 ERMRQNRNFRNTSKRAAQGEVPSDKINNSQEEQAIKERYLGQKRLTKRRPRRLNERKFVF 183
Query: 127 DWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEG 185
DW+ +DTS+D N LY+ H+ Q FGRG G+D ++QKK + ++ E R +
Sbjct: 184 DWDVADDTSQDYNPLYKEKHQIQF-FGRGHIGGIDIKQQKKEIGRFYSKLLESRRSDTQK 242
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
V+EK + K EA +D DRHW+EK L++MTERDWRIFREDFNIS KG
Sbjct: 243 VQEKKRLSGVAK--REAKQKWD------DRHWTEKALDQMTERDWRIFREDFNISTKGGN 294
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+WAE + EL +++VGY P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 295 IPNPLRSWAEMNVADELKDVIKKVGYPEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 354
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I RLP + E+ +GPYA++MAPTRELAQQIEEETVKF LGIK VS++GG
Sbjct: 355 LIPLLNWIQRLPKLERLEDTEQGPYAIIMAPTRELAQQIEEETVKFGRPLGIKTVSLIGG 414
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+Q ++R G E+VI TPGRL D LE RY VLNQC Y+VLDEAD+MIDMGFEP+V
Sbjct: 415 LSREDQALKLRMGAEIVIGTPGRLNDVLENRYMVLNQCTYIVLDEADKMIDMGFEPEVNN 474
Query: 425 VLDAMPSSNLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVV 476
+L +P +N KP+NED E D K + YR T MF+ATMPPAVERLAR YLR P +
Sbjct: 475 ILTYLPVTNEKPDNEDAEDDSKLLSNFATKHKYRQTVMFTATMPPAVERLARSYLRRPAM 534
Query: 477 VTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK 536
V IG+AGK TE + Q V M+ E EK +L +L D I+FVN KK AD++AK L+K
Sbjct: 535 VYIGSAGKPTERVEQIVYMVSEQEKRRKLLEILAAGLDPPVIIFVNQKKGADVLAKGLEK 594
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
LGY LHGGK QEQRE +L ++ + +LVATDVAGRGIDI DV+ VINYDM I+
Sbjct: 595 LGYSAVVLHGGKGQEQREYALASLKSGQKEILVATDVAGRGIDIKDVSMVINYDMSKTID 654
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 655
Y HRIGRTGRAGK+G+A + LT D VFYDLKQ+LIQS S P ELA H ++ KPG
Sbjct: 655 EYVHRIGRTGRAGKSGIAISLLTKEDAPVFYDLKQLLIQSPVSTCPHELANHPDAQTKPG 714
Query: 656 TIPDRPPRRNDTVF 669
+ + R +TV+
Sbjct: 715 ILAAKKRRAEETVY 728
>gi|198425972|ref|XP_002127372.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
[Ciona intestinalis]
Length = 790
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 325/593 (54%), Positives = 426/593 (71%), Gaps = 25/593 (4%)
Query: 91 ERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQL 150
+++ E+ELE IK++YLG K +KRV + +++ +F FDW+ +DTS D N +Y+ H+ L
Sbjct: 210 DKDSEKELEAIKDRYLGVVKKRKRVRRLNDR-KFVFDWDAGDDTSVDYNPIYKEKHQVHL 268
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
+GRGF AG+D + QKK ++ E+ E+ R + E++ + L+ K+E LYD
Sbjct: 269 -YGRGFIAGIDVKSQKKQQSEFYNEIIEKRRTDQEKEQEKKRQKNLQ-KKERKRLYD--- 323
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE-GKLTPELLRAVERV 269
DRHW++K L EM ERDWRIFRED+NI+ KG IP P+RNW E G L PE++ + R+
Sbjct: 324 ---DRHWTKKDLGEMQERDWRIFREDYNITTKGGNIPDPIRNWKECGDLPPEIVEVIHRI 380
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GP 328
GYK+P+PIQ AIP+G RD+IG+AETGSGKTAAF++P+L +I+ LP I +A+ GP
Sbjct: 381 GYKDPTPIQRQAIPIGFLNRDIIGVAETGSGKTAAFLIPLLAWITSLPKIERLEDADKGP 440
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA+++APTRELAQQIEEET+KF LGI+ V+++GG S E+QGF++R GCE+VIATPGRL
Sbjct: 441 YALILAPTRELAQQIEEETIKFGKELGIRTVAVIGGLSREDQGFKLRMGCEIVIATPGRL 500
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI 448
ID LE RY VL+QC YVVLDEADRMIDMGFEP V +LD MP +N KP+ DE +++K I
Sbjct: 501 IDVLENRYIVLSQCTYVVLDEADRMIDMGFEPDVQKILDHMPVTNQKPD--DESMEDKII 558
Query: 449 ----------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
YR T MF+ATMP AVERLAR YLR P +V IG+AGK E + Q V ++KE
Sbjct: 559 MKSNFLTKHKYRQTVMFTATMPVAVERLARSYLRRPAIVYIGSAGKPIERVKQIVYLVKE 618
Query: 499 SEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
+EK +L LL++ IVFVN KK D++AK+L+K+GY TTLHGGK QE RE++L
Sbjct: 619 NEKRKKLLGLLEKGITPPVIVFVNQKKGCDVLAKSLEKMGYNSTTLHGGKGQEHRELALS 678
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
G + ++LVATDVAGRGIDI DV +IN+DM NIE YTHRIGRTGRAGKTG A TFL
Sbjct: 679 GLKNGSKDILVATDVAGRGIDIQDVTLIINFDMAKNIEDYTHRIGRTGRAGKTGTAVTFL 738
Query: 619 TFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
T D+ VFYDL+Q LI+S S PPEL +H ++ KPGTI + RR +T+FA
Sbjct: 739 TQSDSAVFYDLRQALIESPVSSCPPELDRHPEAQHKPGTILTK-KRREETIFA 790
>gi|443729582|gb|ELU15447.1| hypothetical protein CAPTEDRAFT_224580 [Capitella teleta]
Length = 648
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/611 (53%), Positives = 430/611 (70%), Gaps = 28/611 (4%)
Query: 75 EEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT 134
E++ +ER++ + ++ E+E E IKE+YLG K KKR+ + +++ +F FDW+ EDT
Sbjct: 52 EKDDGGKERSKEGRSHLKDGEKEHEAIKERYLGMLKKKKRIRRLNDR-KFVFDWDAGEDT 110
Query: 135 SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAA 194
S D N LY+ H QL FGRG AG+D ++QKK +K E+ E+ R EK +E
Sbjct: 111 STDYNPLYKEKHYVQL-FGRGNIAGIDIKQQKKEQSKFYGELLEQRRSNT---EKDQEVV 166
Query: 195 ALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRN 252
LK K EA +D DRHWSEK ++EMTERDWRIF+EDFNI+ KG KIP+P+RN
Sbjct: 167 RLKKVAKREAKQRWD------DRHWSEKPVDEMTERDWRIFKEDFNIACKGGKIPQPIRN 220
Query: 253 WAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTY 312
W E K+ ELL +E++GY P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+LT+
Sbjct: 221 WRESKICTELLDIIEKIGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLTW 280
Query: 313 ISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQG 371
I LP I +A+ GPYA+++APTRELAQQIEEET++F LG+K V+++GG S EEQG
Sbjct: 281 IQGLPKIERMEDADYGPYALILAPTRELAQQIEEETIRFGGPLGMKTVAVIGGLSREEQG 340
Query: 372 FRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS 431
F++RQGCEVVIATPGRLID LE +Y VL++C YVVLDEAD+MI+MGFEP+V +L +P
Sbjct: 341 FKLRQGCEVVIATPGRLIDVLENKYLVLHRCTYVVLDEADKMINMGFEPEVQNILKFLPV 400
Query: 432 SNLKPENEDEELDE--------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 483
+N KP++E+ E E K +R T MF+ATMPPAVERLAR YLR P VV IG+AG
Sbjct: 401 TNEKPDSEEAEDAEFLLSNFMSKNKFRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG 460
Query: 484 KATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTT 543
K + + Q V M+ E +K +L +L + D IVFVN KK AD++ K L+K+GY T
Sbjct: 461 KPIDRVEQIVHMVSEQQKRKKLMEILAQGIDPPIIVFVNQKKGADVLCKGLEKMGYNAIT 520
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE YTHRIG
Sbjct: 521 LHGGKGQEQREFALASLKEGTKDILVATDVAGRGIDIKDVSIVLNYDMAKNIEDYTHRIG 580
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---PPELAKHEASKFKPGTIPDR 660
RTGRAGKTGVA +F T D+ +FYDLK L ++SPV PPELA H + KPG I +
Sbjct: 581 RTGRAGKTGVAISFCTKDDSAIFYDLK--LAMNDSPVSTCPPELANHPDAMHKPGAIVHK 638
Query: 661 PPRRNDTVFAH 671
R+++ V+ +
Sbjct: 639 -KRKDEMVYIN 648
>gi|196001667|ref|XP_002110701.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
gi|190586652|gb|EDV26705.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
Length = 722
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 341/676 (50%), Positives = 455/676 (67%), Gaps = 52/676 (7%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R AL++RQ ++ ++ ++ ++ ERE+ ++
Sbjct: 77 KPKFLTKEERVAAALKKRQLEVEERNKKLQE---------------------EREKRQKF 115
Query: 74 REEEAKARERAR---------LEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRF 124
EE + R R + +R++++EL+ IK+QYLG K KK++ + +E+ +F
Sbjct: 116 EEESNQDRRSRRDRRERDRREIHDDLDRDKQKELDAIKQQYLGGIKKKKKLRRMNER-KF 174
Query: 125 SFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKE 184
FDWE T+DTS D+N +YQ H Q L GRG AG+D +EQKK ++ ++ E R KE
Sbjct: 175 VFDWEATDDTSDDINPIYQERHNIQFL-GRGHIAGIDLKEQKKNQSRFYGDLLAERRTKE 233
Query: 185 GVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
+ + + K KE+ YD +RHW++K L+EMTERDWRIFRED+NIS KG
Sbjct: 234 EKDMERDRINREKNKEKRV-AYD------ERHWTQKDLDEMTERDWRIFREDYNISTKGG 286
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P+R W+E +L+ ELL + + Y P+PIQ AIP+GLQ RD+IG+AETGSGKTAA
Sbjct: 287 SIPNPLRAWSESELSKELLDIISDLKYNEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAA 346
Query: 305 FVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVG 363
F++P+L +I+ LP I E + + GPYA++MAPTRELAQQIEEE +F +GI+ V+++G
Sbjct: 347 FLIPLLVWITSLPKIVREADIDQGPYAIIMAPTRELAQQIEEEAARFGKPVGIRTVAVIG 406
Query: 364 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 423
G + EEQGF +RQGCE+VIATPGRL+D L+ Y VLNQC YVVLDEADRMIDMGFEP V
Sbjct: 407 GLNREEQGFLLRQGCEIVIATPGRLLDVLDNSYLVLNQCTYVVLDEADRMIDMGFEPDVQ 466
Query: 424 GVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ +P SN KP+ +D + L +K YR T MF+ATMPP VERLAR YLR P
Sbjct: 467 SILEYLPVSNQKPDTDDAQDPNKIRLKLGDKNRYRQTVMFTATMPPPVERLARSYLRRPA 526
Query: 476 VVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
VV IG+AGK TE + Q V MMK E++K +L LL L + I+FVN KK D++AK+L
Sbjct: 527 VVYIGSAGKPTESVEQIVHMMKNENDKRKKLVTLLKTL-ESPIIIFVNQKKGCDVLAKSL 585
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+K+GYR TLHGGKSQ+QRE++L G ++ ++LVATDVAGRGIDI DV +VINYDM +
Sbjct: 586 EKIGYRSATLHGGKSQDQRELALNGLKSGSKDILVATDVAGRGIDIRDVQYVINYDMAKS 645
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
IE YTHRIGRTGRAGKTG A TFLT D+ VFYDLKQ+L+ S S P EL+ H + K
Sbjct: 646 IESYTHRIGRTGRAGKTGTAITFLTNDDSGVFYDLKQLLLSSPISTCPIELSNHPDANSK 705
Query: 654 PGTIPDRPPRRNDTVF 669
PG I + RR + +F
Sbjct: 706 PGKIMTK-KRREEKIF 720
>gi|221481559|gb|EEE19941.1| DEAD-box helicase family protein [Toxoplasma gondii GT1]
Length = 1158
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 348/708 (49%), Positives = 449/708 (63%), Gaps = 69/708 (9%)
Query: 16 LFLTKAQREQ--LALERRQEQIAQQKRRQ--EQQQQLLSQPQTHGRNSSDSRDRERERHR 71
+FLTK QREQ A ERRQ ++ ++K RQ + ++ L Q + + ++RE +
Sbjct: 441 MFLTKKQREQQRAADERRQMEMEKKKERQLLQNRKNFLMQQEIEKEREMKEKLKQREMEK 500
Query: 72 REREEEAKARE--------------------------------RARLEKLAE-------- 91
+ E+E + R RAR LA+
Sbjct: 501 IKEEQERRLRAVRGHAGTSSRSKAEEEREAKREAEGKKGGSSGRARESSLADLRLLNLPE 560
Query: 92 -----RERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQ 143
R++ERELE I+ YLG + KK++ KPSEKFR F+F+W + EDT + D N LYQ
Sbjct: 561 QELRARQQERELEQIRNHYLGMRTEKKKIQKPSEKFRNIFNFEWNDAEDTCKGDNNPLYQ 620
Query: 144 NPHEAQLLFGRGFRAGMDRREQKK--------LAAKNEKEMREEIRKKEGVEEKPEEAAA 195
E QLLFGRGFRAGMD REQ+K + + E + E R EA
Sbjct: 621 ERMEPQLLFGRGFRAGMDIREQRKQNNFYDELVKRRQEHQKAEASRGAAEAAAAATEAVR 680
Query: 196 LKLKEEAADLYDTFDMRVDR-HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWA 254
+A+ L + D +R HW+ KK EEM ERDWRIFREDF I KG ++P P+R WA
Sbjct: 681 AARDAQASRLREKEDAEDNRGHWTTKKREEMNERDWRIFREDFEIYIKGGRVPPPIRTWA 740
Query: 255 EGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYIS 314
E L EL+ AV+ Y P+PIQM AIP+ L+QRD+IGIAETGSGKTAAFVLPMLTY+
Sbjct: 741 ESALPWELIEAVKHANYDRPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVK 800
Query: 315 RLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI 374
LPP++E+ +GPYA+++AP+RELA QI+EET KFA + + V++VGG+S E Q F++
Sbjct: 801 GLPPLNEDTGQDGPYALILAPSRELALQIDEETQKFASFCKCQTVAVVGGRSAETQAFQL 860
Query: 375 RQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNL 434
R+G E+VI TPGR+ DCLE+ Y VLNQCNYVVLDEADRMIDMGFE V +LD +P+SNL
Sbjct: 861 RRGAEIVIGTPGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFILDQIPTSNL 920
Query: 435 KPENE----DEELDEK---RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
K +E +E+ K R+YR T MFSATMPPAVERLARKYLR P ++IG G
Sbjct: 921 KSNDEALILQQEMQAKAGHRLYRLTQMFSATMPPAVERLARKYLRQPSYISIGDPGAGKR 980
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGG 547
I Q V + E+ K RLQ +L E +VFVN KK+AD +AK L KLGY +LHGG
Sbjct: 981 AIEQRVEFVPEARKKQRLQDVL-ENATPPVMVFVNQKKSADALAKVLGKLGYSACSLHGG 1039
Query: 548 KSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 607
K+QE RE +L F+ ++VLVATDVAGRGID+ V V+N+DMP +IE YTHRIGRTGR
Sbjct: 1040 KAQENREAALSSFKEGSHDVLVATDVAGRGIDVEGVQLVVNFDMPKDIEAYTHRIGRTGR 1099
Query: 608 AGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPG 655
AG+ G+A +FLT D+ +FYDLKQ+L+ +N+ VP ELA H A+K K G
Sbjct: 1100 AGRKGLAISFLTEEDSGIFYDLKQLLVSTNNIVPLELAHHPAAKAKGG 1147
>gi|237843843|ref|XP_002371219.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
gi|211968883|gb|EEB04079.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
Length = 1158
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 348/708 (49%), Positives = 449/708 (63%), Gaps = 69/708 (9%)
Query: 16 LFLTKAQREQ--LALERRQEQIAQQKRRQ--EQQQQLLSQPQTHGRNSSDSRDRERERHR 71
+FLTK QREQ A ERRQ ++ ++K RQ + ++ L Q + + ++RE +
Sbjct: 441 MFLTKKQREQQRAADERRQMEMEKKKERQLLQNRKNFLMQQEIEKEREMKEKLKQREMEK 500
Query: 72 REREEEAKARE--------------------------------RARLEKLAE-------- 91
+ E+E + R RAR LA+
Sbjct: 501 IKEEQERRLRAVRGHAGTSSRSKAEEEREAKREAEGKKGGSSGRARESSLADLRLLNLPE 560
Query: 92 -----RERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQ 143
R++ERELE I+ YLG + KK++ KPSEKFR F+F+W + EDT + D N LYQ
Sbjct: 561 QELRARQQERELEQIRNHYLGMRTEKKKIQKPSEKFRNIFNFEWNDAEDTCKGDNNPLYQ 620
Query: 144 NPHEAQLLFGRGFRAGMDRREQKK--------LAAKNEKEMREEIRKKEGVEEKPEEAAA 195
E QLLFGRGFRAGMD REQ+K + + E + E R EA
Sbjct: 621 ERMEPQLLFGRGFRAGMDIREQRKQNNFYDELVKRRQEHQKAEASRGAAEAAAAATEAVR 680
Query: 196 LKLKEEAADLYDTFDMRVDR-HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWA 254
+A+ L + D +R HW+ KK EEM ERDWRIFREDF I KG ++P P+R WA
Sbjct: 681 AARDAQASRLREKEDAEDNRGHWTTKKREEMNERDWRIFREDFEIYIKGGRVPPPIRTWA 740
Query: 255 EGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYIS 314
E L EL+ AV+ Y P+PIQM AIP+ L+QRD+IGIAETGSGKTAAFVLPMLTY+
Sbjct: 741 ESALPWELIEAVKHANYDRPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVK 800
Query: 315 RLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI 374
LPP++E+ +GPYA+++AP+RELA QI+EET KFA + + V++VGG+S E Q F++
Sbjct: 801 GLPPLNEDTGQDGPYALILAPSRELALQIDEETQKFASFCKCQTVAVVGGRSAETQAFQL 860
Query: 375 RQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNL 434
R+G E+VI TPGR+ DCLE+ Y VLNQCNYVVLDEADRMIDMGFE V +LD +P+SNL
Sbjct: 861 RRGAEIVIGTPGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFILDQIPTSNL 920
Query: 435 KPENE----DEELDEK---RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
K +E +E+ K R+YR T MFSATMPPAVERLARKYLR P ++IG G
Sbjct: 921 KSNDEALILQQEMQAKAGHRLYRLTQMFSATMPPAVERLARKYLRQPSYISIGDPGAGKR 980
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGG 547
I Q V + E+ K RLQ +L E +VFVN KK+AD +AK L KLGY +LHGG
Sbjct: 981 AIEQRVEFVPEARKKQRLQDVL-ENATPPVMVFVNQKKSADALAKVLGKLGYSACSLHGG 1039
Query: 548 KSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 607
K+QE RE +L F+ ++VLVATDVAGRGID+ V V+N+DMP +IE YTHRIGRTGR
Sbjct: 1040 KAQENREAALSSFKEGSHDVLVATDVAGRGIDVEGVQLVVNFDMPKDIEAYTHRIGRTGR 1099
Query: 608 AGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPG 655
AG+ G+A +FLT D+ +FYDLKQ+L+ +N+ VP ELA H A+K K G
Sbjct: 1100 AGRKGLAISFLTEEDSGIFYDLKQLLVSTNNIVPLELAHHPAAKAKGG 1147
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 346/676 (51%), Positives = 461/676 (68%), Gaps = 35/676 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQ----QQLLSQPQTHGRNSSDSRDRERER 69
KP+FLTK QR AL+RRQ+++ +Q++R E++ QQ Q + + SD DR R+
Sbjct: 129 KPVFLTKEQRAAEALKRRQQEVQEQRQRMEEERKKRQQFFEQAKRTSDDVSDRLDRRRKE 188
Query: 70 HRRERE---EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSF 126
R RE +E R++ R K ++E+E E IKE+YLG K K+RV + +++ +F F
Sbjct: 189 RERYREADGDEEDGRDKIREHK----DKEKEFEAIKERYLGIIKKKRRVRRLNDR-KFVF 243
Query: 127 DWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGV 186
DW+ +EDT+ D N +Y+ H Q FGRG G+D + QKK +K E+ E R +
Sbjct: 244 DWDASEDTAVDYNPIYKEKHTVQF-FGRGHVGGIDLKAQKKEQSKFYGELLERRRTQA-- 300
Query: 187 EEKPEEAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
EK +E LK ++E +D DRHWS K LEEM ERDWRIFREDFNI+ KG
Sbjct: 301 -EKDQEVVRLKKIKRKEEKQKWD------DRHWSHKSLEEMQERDWRIFREDFNITIKGG 353
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
+IP P+R W+E L +L ++ +GYK+P+PIQ AIP+GLQ RD+IG+AETGSGKT A
Sbjct: 354 RIPNPLRKWSECNLPTAILDVIKELGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTLA 413
Query: 305 FVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVG 363
F+LP+L +I+ LP I + +A+ GPYA++MAPTRELAQQI+EET KFA L I+ V+++G
Sbjct: 414 FLLPLLVWITSLPKIERQEDADQGPYAIIMAPTRELAQQIDEETTKFAKMLDIRSVAVIG 473
Query: 364 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 423
G S EEQGFR+R GCE+VIATPGRLID LE RY VL++C Y+VLDEADRMIDMGFE +V
Sbjct: 474 GLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEGEVQ 533
Query: 424 GVLDAMPSSNLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPV 475
+LD MP +N KP+ +D E +EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 534 KILDYMPVTNQKPDTDDAEDEEKLLANFASKHKYRQTVMFTATMPPAVERLARSYLRRPA 593
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
+V IG+ GK E + Q V ++ ESEK +L LL+ + I+FVN KK AD++AK L+
Sbjct: 594 IVYIGSVGKPVERVEQVVHIVTESEKRKKLVELLNRGVEPPVIIFVNQKKGADVLAKGLE 653
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
++G+ TLHGGK QEQRE +L + ++LVATDVAGRGIDI +V+ VINYDM +I
Sbjct: 654 RMGFNACTLHGGKGQEQREFALASLKGGAKDILVATDVAGRGIDIRNVSMVINYDMAKSI 713
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E YTHRIGRTGRAG G A +F+T D+ +FYDLKQ+++ S S PPELA H ++ KP
Sbjct: 714 EDYTHRIGRTGRAGLHGKAVSFVTKEDSHLFYDLKQLIMSSPVSTCPPELANHPDAQHKP 773
Query: 655 GTIPDRPPRRNDTVFA 670
GT+ + RR + +FA
Sbjct: 774 GTVVTK-KRREEKIFA 788
>gi|391342798|ref|XP_003745702.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Metaseiulus
occidentalis]
Length = 795
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 341/657 (51%), Positives = 443/657 (67%), Gaps = 23/657 (3%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQE--QQQQLLSQPQTHGRNSSDSRDRERERHR 71
KP+F TK QR AL RRQ++I +Q+++QE +++++ SQ +T + + R+RER R
Sbjct: 137 KPVFRTKEQRAADALARRQKEIEEQRKKQEAERRRRIESQEETMPKPRHEVRERERRRDD 196
Query: 72 REREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENT 131
R+ ER++ RE E IK++YLG K K+R+ K ++K +F FDW+ +
Sbjct: 197 RDVGRRRDDDHFRTPGTSTERDKLREQEAIKDRYLGMMKKKRRIRKLNDK-KFVFDWDPS 255
Query: 132 EDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
EDTS D N LY++ H QL FGRG AG+D +QKK +K ++ E R + E++ E
Sbjct: 256 EDTSNDYNPLYKDRHTIQL-FGRGHIAGIDINQQKKEQSKFYGDLLESRRTNQ--EKEQE 312
Query: 192 EAAALKLKE-EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPM 250
+A KLK E +D DRHWS+K L EMTERDWRIFRED+NIS KG IP P+
Sbjct: 313 QARLQKLKNREEKQRWD------DRHWSQKDLAEMTERDWRIFREDYNISIKGGNIPSPL 366
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
R W+E +L E+ ++ + Y +P+PIQ AIP+GLQ RD+IG+AETGSGKT AF+ P+L
Sbjct: 367 RKWSEAQLPSEITDILDELKYTDPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLFPLL 426
Query: 311 TYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+IS LP E +GPYA++MAPTRELAQQIEEET+KFA +GI+ V+++GG S E+
Sbjct: 427 CWISSLPKQDVIETADQGPYAIIMAPTRELAQQIEEETIKFAKKMGIRTVAVIGGLSRED 486
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
QGF++R GCE+VIATPGRLID LE RY VL++C Y+VLDEADRMIDMGFEP V VL+ M
Sbjct: 487 QGFKLRMGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKVLEHM 546
Query: 430 PSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGT 481
P SN KP+ ED E + + +R T MF+ATMPPAVERLAR YLR P VV IG+
Sbjct: 547 PVSNQKPDTEDAENAAFLLANFNTSQKFRQTVMFTATMPPAVERLARTYLRRPAVVYIGS 606
Query: 482 AGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRV 541
GK TE + Q V +M E EK +L +L I+FVN KK D++AK L+KLG+
Sbjct: 607 IGKPTERVEQVVYIMNEGEKRRKLVEILSAGVIPPVIIFVNQKKGVDVLAKGLEKLGFNT 666
Query: 542 TTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHR 601
TLHGGK QEQRE +L + ++LVATDVAGRGIDI V+ VINYDM +IE YTHR
Sbjct: 667 CTLHGGKGQEQREYALASLKNGTKDILVATDVAGRGIDIQKVSMVINYDMAKSIEDYTHR 726
Query: 602 IGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTI 657
IGRTGRAG G A +F T D+ +FYDLKQMLI S S P +LA H ++ KPGT+
Sbjct: 727 IGRTGRAGLHGKAVSFCTKDDSGLFYDLKQMLISSPVSNCPSDLANHPDAQHKPGTV 783
>gi|357601923|gb|EHJ63191.1| hypothetical protein KGM_14588 [Danaus plexippus]
Length = 829
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 341/702 (48%), Positives = 454/702 (64%), Gaps = 63/702 (8%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSR----DRER-- 67
KP+FLTK QR LALERR+EQ+ + R E+ + + T D + DRE+
Sbjct: 146 KPVFLTKEQRAALALERRREQV-EAMRAAERPAAVATIDLTGTSKKDDEKKYRDDREKER 204
Query: 68 -----------------------------ERHRREREEEAKARERARLEKLAEREREREL 98
+R+R +++E+ + E +++ERE
Sbjct: 205 EHDKEREREREREREKERERRHEERKSGADRNRDDKKEKNE-------EYSKTKDKEREE 257
Query: 99 ELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRA 158
E IK +YLG K K+RV + +++ +F FDW+ +EDTS D NALY+ H+ Q FGRG A
Sbjct: 258 EAIKARYLGIVKKKRRVRRLNDR-KFVFDWDASEDTSNDYNALYKERHQVQF-FGRGHIA 315
Query: 159 GMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWS 218
G+D + QKK K + E+ R+ E +E+ + K+E +D DRHWS
Sbjct: 316 GIDIKSQKKDYCKFYGNLLEK-RRTELEKEQEKSRLKKVKKKEDKQKWD------DRHWS 368
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
EK +EMTERDWRIFRED+NI+ KG +IP P+R+W E +++ + +VGYK+P+PIQ
Sbjct: 369 EKDQDEMTERDWRIFREDYNITLKGGRIPNPIRSWKEANFHEDIMEIISKVGYKSPTPIQ 428
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTR 337
AIP+GLQ RD+IG+AETGSGKT AF++P+LT+I LP E+ +GPYA+++APTR
Sbjct: 429 RQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLTWIQSLPKNERMEDADQGPYAIILAPTR 488
Query: 338 ELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYA 397
ELAQQIEEET KF LGI V +VGG S EEQGF++R GCE+VIATPGRLID LE RY
Sbjct: 489 ELAQQIEEETNKFGIPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLENRYL 548
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIY 449
VLN+C YVVLDEADRMIDMGFEP V +L+ MP SN+KP+ + E + K+ +
Sbjct: 549 VLNRCTYVVLDEADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLANYNSKKKF 608
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL 509
R T MF+ATMPPAVERLAR YLR P +V IG+ GK + Q V M+ E+EK +L +L
Sbjct: 609 RQTVMFTATMPPAVERLARTYLRRPAIVYIGSVGKPVDRTEQVVFMIGENEKRRKLTEIL 668
Query: 510 DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLV 569
+ I+FVN KK AD++AK L+KLG+ TLHGGK QEQR+ +L + ++LV
Sbjct: 669 QRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKNGSKDILV 728
Query: 570 ATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDL 629
ATDVAGRGIDI DV+ VINYDM +IE YTHRIGRTGRAGKTG A +F+T D+ ++YDL
Sbjct: 729 ATDVAGRGIDIKDVSVVINYDMAKSIEDYTHRIGRTGRAGKTGKAVSFVTKEDSAIYYDL 788
Query: 630 KQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
KQ+L+ S+ S PPEL H ++ KPGT+ + RR + +FA
Sbjct: 789 KQVLLASSVSTCPPELMNHPEAQHKPGTVVTK-KRREEMIFA 829
>gi|328771766|gb|EGF81805.1| hypothetical protein BATDEDRAFT_16042 [Batrachochytrium
dendrobatidis JAM81]
Length = 584
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 315/575 (54%), Positives = 411/575 (71%), Gaps = 26/575 (4%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
E+E+ I+E+Y+G+++ K+++ + +EK +F FDW+ EDTS+D+N +Y N H AQL FGR
Sbjct: 14 EKEMAAIRERYMGTERKKRKIRRMNEK-KFVFDWDQGEDTSKDINPIYANRHSAQL-FGR 71
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRV- 213
G AG+D R QKK A + ++ R AA L + +L D RV
Sbjct: 72 GLIAGIDIRAQKKERASFYANIVQDRR----------SAAELDRAKYLIELQSLKDRRVA 121
Query: 214 --DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
+RHWSEKKL EM +RDWRIF+EDF+IS KG IP P+R W E +L+ +L A+ R+GY
Sbjct: 122 FDERHWSEKKLSEMKDRDWRIFKEDFSISTKGGNIPNPLRTWDECELSETILGAISRIGY 181
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K P+PIQ AIP+GLQ RD+IGIAETGSGKTA+FV+PML +I+ +PP++E N ++GPYA+
Sbjct: 182 KEPTPIQRQAIPMGLQNRDIIGIAETGSGKTASFVIPMLKFITEMPPLTEINSSQGPYAL 241
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTRELAQQIE ET KFA +G VSIVGG ++E Q F +R G +VIATPGRL DC
Sbjct: 242 ILAPTRELAQQIESETSKFAREMGFICVSIVGGHAVEGQAFNLRNGAHIVIATPGRLRDC 301
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE-------ELD 444
LE+R VL+QC YVV+DEADRM+DMGFEP + +LDAMP SN+KP++++ EL
Sbjct: 302 LEQRILVLSQCTYVVMDEADRMVDMGFEPDLKFILDAMPVSNIKPDSDESENVQLLRELT 361
Query: 445 EKRI-YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKF 502
K +R T MFSATMP AVERLA+ YLR P VTIG AG+ + I Q V M+ + K
Sbjct: 362 GKVTPFRQTVMFSATMPVAVERLAKAYLRRPATVTIGIAGQVVDRIEQRVEMINDDGRKL 421
Query: 503 SRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
SRLQ +L + IVFVN KK +++A+ LD+LG + TTLHGGKSQEQRE SL G +
Sbjct: 422 SRLQEILTSRQFEPPMIVFVNQKKGCEVIARALDRLGLKSTTLHGGKSQEQREASLLGLK 481
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
++LVATDVAGRGID+ +V+ VIN+DM +IE YTHRIGRTGRAGK G A TFL+ +
Sbjct: 482 QGTKDILVATDVAGRGIDVKNVSVVINFDMAKSIEDYTHRIGRTGRAGKKGTAITFLSNY 541
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 655
DTDV YDL+QM+++S S VPPEL+KHEA++ KPG
Sbjct: 542 DTDVMYDLRQMILKSPISKVPPELSKHEAAQTKPG 576
>gi|84996425|ref|XP_952934.1| DEAD-family helicase [Theileria annulata strain Ankara]
gi|65303931|emb|CAI76310.1| DEAD-family helicase, putative [Theileria annulata]
Length = 757
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/594 (50%), Positives = 415/594 (69%), Gaps = 32/594 (5%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHEAQLL 151
E+ELE I+ YLG K KK+++KPSEKF+ F+F+W+ +EDT++ + N +YQ+ E QLL
Sbjct: 174 EKELEQIRLHYLGLNKEKKKILKPSEKFKTIFNFEWDESEDTTKFENNPIYQDRPEPQLL 233
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEG----VEEKPEEAAALKLKEEAADLYD 207
FGRGFRAG+D REQ+K + +++ KK K E+ +K+E +Y
Sbjct: 234 FGRGFRAGIDVREQRK-----KNNFYDQLSKKRAELPQTAPKEPESTIKTIKDEVPTIYH 288
Query: 208 TFDM-------RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP 260
+ + HW++KKL EMTERDWRIFREDF I KG ++P P+R WAE L
Sbjct: 289 QLNTIKYIESDMLSNHWTKKKLSEMTERDWRIFREDFEIYIKGGRVPPPIRTWAESPLPW 348
Query: 261 ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS 320
ELL A+++ GY P+PIQM AIP+ L+ RD+IGIA TGSGKTAAFVLPMLTY+ +LPP+
Sbjct: 349 ELLEAIKKAGYIKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLD 408
Query: 321 EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEV 380
+E +GPYA+++AP+RELA QI +ETVKF+ + + V++VGG++ E Q F +R+GCE+
Sbjct: 409 DETSLDGPYALILAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAESQAFELRKGCEI 468
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
+I TPGR+ DCL+R Y VL+QCNYV+LDEADRMIDMGFE + +LD +PS+NLK +E
Sbjct: 469 IIGTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDMGFEDVLKYILDCIPSTNLKDRDES 528
Query: 441 EELDEK-------RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV 493
L+++ R YR T+MFSATMPPAVE+L ++YLR P ++IG G I+Q +
Sbjct: 529 SALEQELSTKAGHRRYRITHMFSATMPPAVEKLTKRYLRAPAFISIGDVGGGKTSITQQL 588
Query: 494 VMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
++ES+K L+ L+ L + I+FVN KKN D++ K++ K+GYR +LHGGK+QE R
Sbjct: 589 DFVQESKKTRHLEETLETL-EPPIIIFVNLKKNTDVITKHITKIGYRAVSLHGGKTQESR 647
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
E +L F++ Y++LVATDV GRG+D+ + VINYDMP +I+ YTHRIGRTGRAG G+
Sbjct: 648 EDALNKFKSGAYDILVATDVVGRGLDVEGIKVVINYDMPKDIQTYTHRIGRTGRAGLKGL 707
Query: 614 ATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDT 667
+ +F+T D D+FYDLKQ+LI +++ VP EL++H ASK KP P RN T
Sbjct: 708 SISFVTDADVDLFYDLKQLLISTDNIVPLELSQHPASKVKPNQ-----PHRNIT 756
>gi|429329363|gb|AFZ81122.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 732
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 327/664 (49%), Positives = 443/664 (66%), Gaps = 37/664 (5%)
Query: 21 AQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGR------------NSSDSR-DRER 67
A+REQL R +E++ ++KR QQ + + H R N SR +R
Sbjct: 66 AKREQLDSVRTEERLKRRKREFIQQSGRNREHKKHERRTEEEIEQSSSENYHKSRENRTN 125
Query: 68 ERHRREREEEAKARERARLEKLAERER-----ERELELIKEQYLGSKKPKKRVIKPSEKF 122
E + + KL E++ E+ELE I+E YLG K+ KK+V KPSEKF
Sbjct: 126 ESSNNDLNVSNSDLAFLNMLKLPEKDARAKLVEKELEQIREYYLGLKREKKKVQKPSEKF 185
Query: 123 R--FSFDWENTEDTSR-DMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 179
+ F+F+W+ +EDT+R D N +YQN E QLLFGRGFRAG+D REQ+K +E
Sbjct: 186 KTIFNFEWDESEDTTRFDNNPIYQNRPEPQLLFGRGFRAGIDVREQRK-----RNSFYDE 240
Query: 180 IRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRV-DRHWSEKKLEEMTERDWRIFREDFN 238
+ K+ PE A + + + D + + HW++KK E+MT+RDWRIFREDF+
Sbjct: 241 LLKRRS--SHPEWAETISKIQYSTKKSSELDTNIANTHWTQKKREDMTDRDWRIFREDFD 298
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I +G ++P P+R WAE L ELL A+++ GY P+PIQM AIP+ L+ RD+IGIA TG
Sbjct: 299 IYIRGGRVPPPIRTWAESPLPWELLEAIKKAGYSKPTPIQMQAIPIALEMRDLIGIAVTG 358
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKTAAFVLPMLTY+ LPP+++E +GPY++++AP+RELA QI +ET KFA + K
Sbjct: 359 SGKTAAFVLPMLTYVKSLPPLNDETGQDGPYSLILAPSRELALQIFDETNKFAAFCKCKT 418
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
V++VGG+S E Q F +R+G EVVI TPGR+ DCL+R Y VL+QCNYV+LDEADRMIDMGF
Sbjct: 419 VAVVGGRSAEVQAFELRRGAEVVIGTPGRVKDCLDRAYTVLSQCNYVILDEADRMIDMGF 478
Query: 419 EPQVVGVLDAMPSSNLKPENE----DEELDEK---RIYRTTYMFSATMPPAVERLARKYL 471
E V +LD +P++NLK +NE ++EL K R YR T+MFSATMPPAVE+L RKYL
Sbjct: 479 EEVVNDILDCIPTTNLKDDNEYTAIEQELSMKAGHRRYRITHMFSATMPPAVEKLTRKYL 538
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P ++IG G I+Q + + E++K LQ +L+ L + I+FVN KK D++A
Sbjct: 539 RAPAFISIGDVGGGKRSITQRLEFVSETKKKKALQDILETL-EPPIIIFVNLKKVTDVIA 597
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K L+K+ YR +LHGGK Q+ RE +LEGF+ Y++LVATDVAGRG+D+ V VINYDM
Sbjct: 598 KQLNKMNYRAVSLHGGKHQDSREDALEGFKAGDYDILVATDVAGRGLDVEGVKAVINYDM 657
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
P +I+ YTHRIGRTGRAG G+A + +T D+ +FYDLKQ+LI +++ VP EL++H ASK
Sbjct: 658 PKDIQSYTHRIGRTGRAGLKGLAISLVTEDDSGIFYDLKQLLISTDNVVPQELSQHPASK 717
Query: 652 FKPG 655
KP
Sbjct: 718 IKPA 721
>gi|68074371|ref|XP_679100.1| snrnp protein [Plasmodium berghei strain ANKA]
gi|56499760|emb|CAH95922.1| snrnp protein, putative [Plasmodium berghei]
Length = 782
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 331/691 (47%), Positives = 448/691 (64%), Gaps = 64/691 (9%)
Query: 30 RRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRREREEEAKARERARLEK- 88
++ + I +++Q+++ + SQ + SS+ E + ++EE K + EK
Sbjct: 81 KKSDDIRNDRKKQKKRNREHSQSNEDKKISSNDNIHELNKQELSKKEENKKLYQITYEKT 140
Query: 89 ---LAE----------RE--RERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENT 131
LAE RE RERELE+IK+QYLG K KK++ KPSEKFR F+F+W+ +
Sbjct: 141 QSSLAELNMLHIDDIEREKFRERELEIIKQQYLGLNKHKKKMQKPSEKFRNIFNFEWDKS 200
Query: 132 EDTSR-DMNALYQNPHEAQLLFGRGFRAGMDRREQKK--------------LAAKNEKEM 176
EDTSR D N LYQN E QLLFGRG+ AG+D REQ+K L K +KE
Sbjct: 201 EDTSRNDSNPLYQNRLEPQLLFGRGYIAGIDVREQRKKHNFYDKLVQNRIQLCMKKKKEY 260
Query: 177 REEIRKKEGVEEKPEE-------AAALKLKEEAADLYDT--------FDMRVD------- 214
E KK G E +E L ++L + ++ +++
Sbjct: 261 EESGEKKWGKNESDKEYNENEDNIIGSNLTNYVSNLENNGLNRNQFIYEPKINNIIKDTD 320
Query: 215 -RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
+HWSEKK E+MT+RDWRIFRED I KG +P P+R W E L+ +LL+A+++ Y+
Sbjct: 321 NKHWSEKKREDMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSSDLLKAIKKAKYEK 380
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQM AIP+ L+ RD+IGIAETGSGKTAAFVLPML+Y+ +LPP++ E +GPYA+++
Sbjct: 381 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALII 440
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
AP+RELA QI EET KFA Y + V++VGG++ E Q F +R+G E+VI TPGRL DCLE
Sbjct: 441 APSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLE 500
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK------- 446
+ Y VLNQCNYV++DEADRM+DMGFE V +LD +P+SNLK E++ L E+
Sbjct: 501 KAYTVLNQCNYVIIDEADRMMDMGFEDAVHFILDNIPTSNLKSEDDALALQEEMMAKAGH 560
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
R+YR T MFSATMPP+VERL+RKYLR P ++IG G I Q + + E +K +LQ
Sbjct: 561 RLYRLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFITEGKKKQKLQ 620
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
LL E+ + IVFVN KK AD++AK++ K+ ++ LHGGK QE RE +L F+ ++
Sbjct: 621 ELL-EIYEPPIIVFVNQKKVADIIAKSISKMKFKAIALHGGKVQEMREEALNAFKNGEFD 679
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+LVATDVAGRGID+ V VIN+D+P +I YTHRIGRTGRAG G+A +F+T DT +F
Sbjct: 680 ILVATDVAGRGIDVHGVKLVINFDLPKDIASYTHRIGRTGRAGMKGLAISFVTEQDTHIF 739
Query: 627 YDLKQMLIQSNSPVPPELAKHEASKFKPGTI 657
YDL+Q LI SN+ VP ELA + AS+ KPGT+
Sbjct: 740 YDLRQFLISSNNIVPLELANNPASQVKPGTV 770
>gi|393905846|gb|EJD74089.1| DEAD box ATP-dependent RNA helicase [Loa loa]
Length = 757
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 319/595 (53%), Positives = 416/595 (69%), Gaps = 26/595 (4%)
Query: 91 ERERERELE----LIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPH 146
ERE +++LE I+++YLG ++ K++ + + +F FDW+ EDTS D N LYQN H
Sbjct: 171 ERETDKDLEKLNEAIRQRYLGGQREKRKRGRRLHERKFIFDWDAGEDTSNDYNKLYQNRH 230
Query: 147 EAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY 206
E Q FGRG AGMD QKK ++ + E+ R KE +++ A +K KE+
Sbjct: 231 EVQF-FGRGSIAGMDVNAQKKQKSEFYANLMEKRRTKEEKQQEELRLAGVKKKEKK---- 285
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ FD +RHW++K LE+MTERDWRIFREDFNIS KG ++P+P+RNW E L E+ +
Sbjct: 286 EAFD---NRHWTQKSLEQMTERDWRIFREDFNISIKGGRVPKPLRNWDEAGLPSEVFDVI 342
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
++GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I+ +P +E +
Sbjct: 343 MKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITSIPKFHGNDEQD 402
Query: 327 -GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
GPYA++MAPTRELAQQIEEETVKF LGI+ VS++GG S EEQG ++R G EVVIATP
Sbjct: 403 TGPYAIIMAPTRELAQQIEEETVKFGQLLGIRTVSVIGGASREEQGLKLRLGVEVVIATP 462
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+D LE RY L+QC YV+LDEADRM+DMGFEP+V VL+ +P +NLKP+ ED E +E
Sbjct: 463 GRLLDVLENRYLSLDQCTYVILDEADRMLDMGFEPEVQKVLEYIPVTNLKPDTEDAEKEE 522
Query: 446 --------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
K+ YR T MF+ATM PA+ERLAR YLR P VV IG+ G+ TE + Q V M+
Sbjct: 523 SIMENFFSKKKYRQTVMFTATMSPAIERLARAYLRRPAVVYIGSVGRPTERVEQIVYMIG 582
Query: 498 ESEKFSRLQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
E K +L L+ + + I+FVN K+ ADM+AK L KLG++ LHGGK Q+ RE S
Sbjct: 583 EESKRKKLVELISSDAFEPPIIIFVNQKRGADMLAKGLTKLGFQPCVLHGGKGQDAREYS 642
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L + ++LVATDVAGRGIDI DV+ V+NYDM +IE YTHRIGRTGRAGK G A T
Sbjct: 643 LAALKDGTKDILVATDVAGRGIDIKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAIT 702
Query: 617 FLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGT-IPDRPPRRNDTVF 669
FLT D DVFYDLKQ L++S S PPELA H ++ KPGT +P + R+ +T+F
Sbjct: 703 FLTPEDKDVFYDLKQCLLESPVSTCPPELANHPEAQHKPGTYVPKK--RQEETLF 755
>gi|452822201|gb|EME29223.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 763
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 336/653 (51%), Positives = 434/653 (66%), Gaps = 33/653 (5%)
Query: 13 KKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRR 72
+KP F++K++RE+ ALE+ E RR+ + Q H + S R +R
Sbjct: 123 QKPRFISKSERERQALEKLYE------RRKAVDPMKVESTQFHSNSLSKGIPRPPVDVQR 176
Query: 73 EREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTE 132
ER ++ R E E R EL+++ Y+ K K R+ KPSE+FRF F+W+N+E
Sbjct: 177 ERNQKQSDTSRENDE-----ESHRLKELLRKHYMKEKDTKSRLTKPSERFRFRFEWDNSE 231
Query: 133 DT-SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
DT + + A + E LLFGRG R GMD A +++ R ++ EGV P+
Sbjct: 232 DTLNTEEYAELSSFVEVPLLFGRGHRGGMDPASTPS-KAPSKRVTRPKVSDMEGV---PD 287
Query: 192 EAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
+ L++ + DMR HWSEK EEMTERDWRIFRED +I+Y+G K P P R
Sbjct: 288 SRLDMTLEDPVHHRHKK-DMR---HWSEKPKEEMTERDWRIFREDHSIAYRGGKAPFPAR 343
Query: 252 NWAEGKLTPELLRAVERVG-YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
NW E L LL +V + YK P+PIQMAAIP+GL +RD+IG+AETGSGKTAAFVLPML
Sbjct: 344 NWEETGLPRVLLDSVRYIAKYKQPTPIQMAAIPIGLAKRDMIGLAETGSGKTAAFVLPML 403
Query: 311 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
YIS+ PP++ N A+GPYAV++APTRELAQQIEEET KFA LG +V S+VGG SIEEQ
Sbjct: 404 VYISQRPPMTAANAAQGPYAVILAPTRELAQQIEEETRKFAEPLGYRVCSVVGGVSIEEQ 463
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
G ++R+G E+VIATPGR+IDCLERRY VLNQC+YVVLDEADRMIDMGFEPQV GVLDAMP
Sbjct: 464 GMKLREGVEIVIATPGRMIDCLERRYCVLNQCDYVVLDEADRMIDMGFEPQVQGVLDAMP 523
Query: 431 SSNLKPENEDEELDEKR-----IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
SS+LKPE E+ + +YR T+MFSATMPPAVERLARK+LRNP++V +G GK
Sbjct: 524 SSHLKPEVEELSEEFMEESSSILYRQTFMFSATMPPAVERLARKFLRNPIIVAVGDIGKG 583
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELG--DKTAIVFVNTKKNADMVAKNLDK---LGYR 540
EL+ Q V + K + R + +G D +VF+NTK+ D + + ++ L R
Sbjct: 584 AELVQQRVEYVPNETK--KKLRFFEVVGYADPPILVFLNTKRGCDTLVRAIETESGLDIR 641
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
T +H GK QE RE LEGF+ +Y++L+ATDV GRGIDI V VINY+MP IE YTH
Sbjct: 642 ATVIHSGKPQELREEHLEGFKQGKYDILIATDVLGRGIDIKGVNLVINYEMPNKIENYTH 701
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 653
RIGRTGRAG+ G+A +F+T D+++FYDLK L + + VPPE+A HE+ K K
Sbjct: 702 RIGRTGRAGREGLAISFVTPADSEIFYDLKLQLEKVGAKVPPEIANHESVKSK 754
>gi|82539888|ref|XP_724299.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii 17XNL]
gi|23478899|gb|EAA15864.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii]
Length = 967
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 326/685 (47%), Positives = 441/685 (64%), Gaps = 59/685 (8%)
Query: 31 RQEQIAQQKRRQEQQQ-----QLLSQPQTHGRNSSDSRDRERERHRREREEEAKARERAR 85
R ++ Q+KR +E Q ++ S T N D ++ + + E A
Sbjct: 272 RNDRKKQKKRNREHSQSDEDKKMSSNDNTPELNKKDENKKDENKKLYQMSYEKTQSSLAE 331
Query: 86 LEKLA------ERERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR- 136
L L ++ RERELE+IK+QYLG K KK++ KPSEKFR F+F+W+ +EDTS+
Sbjct: 332 LNMLHIDDIERDKYRERELEIIKQQYLGLNKHKKKMQKPSEKFRNIFNFEWDKSEDTSKN 391
Query: 137 DMNALYQNPHEAQLLFGRGFRAGMDRREQKK--------------LAAKNEKEMREEIRK 182
D N LYQN E QLLFGRG+ AG+D REQ+K L K +KE K
Sbjct: 392 DSNPLYQNRLEPQLLFGRGYIAGIDVREQRKKHNFYDKLVQNRIQLCMKKKKEYEASGEK 451
Query: 183 KEGVEEKPEE-------AAALKLKEEAADLYDT--------FDMRVD--------RHWSE 219
K G E +E L + ++L + ++ +++ +HWSE
Sbjct: 452 KWGKNESDKEYNENEDKIIGSNLTKYVSNLENNGLHKNQFIYEPKINNIIKDTDNKHWSE 511
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
KK E+MT+RDWRIFRED I KG +P P+R W E L+ +LL+A+++ Y+ P+PIQM
Sbjct: 512 KKREDMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSSDLLKAIKKAKYEKPTPIQM 571
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
AIP+ L+ RD+IGIAETGSGKTAAFVLPML+Y+ +LPP++ E +GPYA+++AP+REL
Sbjct: 572 QAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALIIAPSREL 631
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
A QI +ET KFA Y + V++VGG++ E Q F +R+G E+VI TPGRL DCLE+ Y VL
Sbjct: 632 AIQIYDETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVL 691
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK-------RIYRTT 452
NQCNYV++DEADRM+DMGFE V +LD +P+SNLK E++ L E+ R+YR T
Sbjct: 692 NQCNYVIIDEADRMMDMGFEDAVHFILDNIPTSNLKSEDDALALQEEMMAKAGHRLYRLT 751
Query: 453 YMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL 512
MFSATMPP+VERL+RKYLR P ++IG G I Q + + E +K +LQ LL E+
Sbjct: 752 QMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFITEGKKKQKLQELL-EI 810
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
+ IVFVN KK AD++AK++ K+ +R LHGGK QE RE +L F+ +++LVATD
Sbjct: 811 YEPPIIVFVNQKKVADIIAKSISKMKFRAIALHGGKVQEMREEALNAFKNGEFDILVATD 870
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VAGRGID+ V VIN+D+P +I YTHRIGRTGRAG G+A +F+T DT +FYDL+Q
Sbjct: 871 VAGRGIDVHGVKLVINFDLPKDIASYTHRIGRTGRAGMKGLAISFVTEQDTHLFYDLRQF 930
Query: 633 LIQSNSPVPPELAKHEASKFKPGTI 657
LI SN+ VP ELA + AS+ KPGT+
Sbjct: 931 LISSNNIVPLELANNPASQVKPGTV 955
>gi|156084736|ref|XP_001609851.1| DEAD box RNA helicase [Babesia bovis T2Bo]
gi|154797103|gb|EDO06283.1| DEAD box RNA helicase, putative [Babesia bovis]
Length = 714
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 332/687 (48%), Positives = 447/687 (65%), Gaps = 42/687 (6%)
Query: 1 MNRLVDEGGSNNK-KPLFLTKAQREQLALE--RRQEQIAQQKRRQ--EQQQQLLSQPQTH 55
M + D +N+ K ++ K REQ E ++ E++A+ + Q Q+++L+ Q +++
Sbjct: 33 MGKHTDLKTTNDAVKVAYVPKHLREQRLQEEIKKAEELAKTREEQIRNQRKELMRQLESN 92
Query: 56 GRNSSDSRDRERERHRREREEEAKAR----ERARLEK----------LAERERERELELI 101
R+ DR++ E KA E + L K + R E+ELE I
Sbjct: 93 KRDGH-RMDRKKRSLENTTENNTKAAVFELENSDLAKKKLLTLPNSEVRPRMVEKELEQI 151
Query: 102 KEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHEAQLLFGRGFRA 158
+E YLG+K K++V K +EKFR F F+W+N++DTSR D N +YQN E QLLFGRG RA
Sbjct: 152 REHYLGNKPTKQKVRKLTEKFRNVFHFEWDNSDDTSRNDNNPIYQNRPEPQLLFGRGCRA 211
Query: 159 GMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYD--TFDMRVDRH 216
GMD +EQ+K A + K +AA + D + + D VD H
Sbjct: 212 GMDPKEQRKHA---------DFYDKLSKLRTGSDAAFSRDSRSNEDRTEPTSVDDDVDTH 262
Query: 217 WSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSP 276
WS K E MT+RDWRIFREDF+I KG+++P PMR WAE L ELLRA++ G+K+P+P
Sbjct: 263 WSAKTKENMTQRDWRIFREDFDIYVKGTRVPPPMRTWAESNLPSELLRAIKDAGFKSPTP 322
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPT 336
IQM AIP+GL RD+IG+AETGSGKT AFVLPMLTY+ LPP++E+ +GPYA+ +APT
Sbjct: 323 IQMQAIPIGLGMRDLIGLAETGSGKTVAFVLPMLTYVKALPPLNEDTLQDGPYALTLAPT 382
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRY 396
RELA QI ETVKF+ + + V +VGG S+++QGF +R G E+VI TPGR+ DCL+R Y
Sbjct: 383 RELATQIHAETVKFSAFCSCRTVLVVGGHSVDQQGFELRNGAEIVIGTPGRIKDCLDRSY 442
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED----EELDEK---RIY 449
VL QCNYV+LDEADRMIDMGFE V +LD +P+SNLK +E+ +EL K R Y
Sbjct: 443 TVLTQCNYVILDEADRMIDMGFEEIVNDILDCIPTSNLKDLDENLALQQELSTKAGYRKY 502
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL 509
R T MFSATMP AVE+L +KYLR+PV+V+IG G + I+Q + E K +LQ LL
Sbjct: 503 RITQMFSATMPAAVEKLTKKYLRSPVIVSIGDVGSGKKSITQRFEFITEHRKKQKLQDLL 562
Query: 510 DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLV 569
L + IVFVN KK AD+VA+++ + R +LHGGK+Q+ RE +LE F+ +++LV
Sbjct: 563 HTL-EGQIIVFVNMKKVADVVARHISNMNLRAISLHGGKTQDIREGALESFKAGDFDILV 621
Query: 570 ATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDL 629
ATDV GRG+D+ V VIN+DMP +IE YTHRIGRTGRAG G+A +F+T D+ +FYDL
Sbjct: 622 ATDVVGRGLDVKGVTAVINFDMPKDIETYTHRIGRTGRAGAKGMAISFVTEDDSHLFYDL 681
Query: 630 KQMLIQSNSPVPPELAKHEASKFKPGT 656
KQ LI + + +PPEL KH A+ KP T
Sbjct: 682 KQQLISTGNDIPPELEKHPATNTKPAT 708
>gi|384498852|gb|EIE89343.1| hypothetical protein RO3G_14054 [Rhizopus delemar RA 99-880]
Length = 754
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/651 (51%), Positives = 451/651 (69%), Gaps = 24/651 (3%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK +R ++ALE+RQ+++ +++++QE++++ N + + E R +
Sbjct: 109 KPKFLTKEERAKIALEKRQKEVEEKRKKQEEERKKRE-------NFDYAAEDEYRRISQR 161
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
R + R +K E E+E + I+E+Y G ++ K+++ + +EK +F FDW+ ED
Sbjct: 162 RSDRYDRRRDKEDDKNDEELNEKEKQAIRERYFGGERKKRKIRRMNEK-KFVFDWDAGED 220
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N LY N H AQ+ FGRG AG+D +EQKK ++ + +E R E ++ + E
Sbjct: 221 TSYDFNPLYANKHNAQM-FGRGRIAGIDEKEQKKHQSEFYDRLLKERRTVEELD-RASEL 278
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
+ L++EA +D +RHW+EK L +M ERDWRIF+EDFNIS KG IP P+R+W
Sbjct: 279 EQISLRKEAKTKWD------ERHWTEKPLNQMKERDWRIFKEDFNISTKGGNIPHPLRSW 332
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E L ++L+ ++ +GYK P+PIQ AIP+G+Q RD+IGIAETGSGKTA+FV+P+L YI
Sbjct: 333 KESGLPDKMLQIIDDIGYKEPTPIQRQAIPIGIQNRDLIGIAETGSGKTASFVIPLLVYI 392
Query: 314 SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFR 373
S LP +SEEN ++GPYA+++APTRELAQQIE+ETVKFA +G VSI+GG I EQ F
Sbjct: 393 SDLPKMSEENMSDGPYALILAPTRELAQQIEQETVKFASPMGFNCVSIIGGHDIVEQAFS 452
Query: 374 IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSN 433
+R G E+VIATPGRL DCLERR VLNQC YVV+DEADRMIDMGFE V +LDA+P SN
Sbjct: 453 MRSGAEIVIATPGRLKDCLERRILVLNQCTYVVMDEADRMIDMGFEGDVNFILDALPVSN 512
Query: 434 LKPENEDE---ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
+KPE E+ +L + R YR T MFSATMP AVERLA+KYLR VVTIG G+A E +
Sbjct: 513 MKPEGEEGMQVDLPQGRKYRQTTMFSATMPTAVERLAKKYLRREAVVTIGITGQAVETVE 572
Query: 491 QHVVMMK-ESEKFSRLQRLLDELGDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGG 547
Q V M+ E K +RL +++ G A I+F+N+KK D ++ L K G+ TLHGG
Sbjct: 573 QRVEMINDEPRKTTRLLEIINS-GKFPAPIIIFLNSKKGVDTISSLLKKQGHHAVTLHGG 631
Query: 548 KSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 607
KSQEQRE++L ++ + VLVATDVAGRGIDI +++ VINYDM +IE YTHRIGRTGR
Sbjct: 632 KSQEQRELALSQVKSGKAGVLVATDVAGRGIDIKNLSLVINYDMAKSIEDYTHRIGRTGR 691
Query: 608 AGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTI 657
AG +GVA TFL+ D +V YDL+QML +S+ S VP ELA H ++ KPGT+
Sbjct: 692 AGNSGVAITFLSSRDAEVMYDLRQMLAKSSISRVPHELAIHPDAQTKPGTV 742
>gi|70949030|ref|XP_743963.1| snrnp protein [Plasmodium chabaudi chabaudi]
gi|56523710|emb|CAH74477.1| snrnp protein, putative [Plasmodium chabaudi chabaudi]
Length = 667
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 315/613 (51%), Positives = 417/613 (68%), Gaps = 47/613 (7%)
Query: 91 ERERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHE 147
E+ RERELE+IK+QYLG K KK++ KPSEKFR F+F+W+ +EDTSR D N LYQN E
Sbjct: 44 EKYRERELEIIKQQYLGLNKHKKKMQKPSEKFRNIFNFEWDKSEDTSRNDSNPLYQNRLE 103
Query: 148 AQLLFGRGFRAGMDRREQKK-------------LAAKNEKEMREEIRKKEGVEEKPEE-- 192
QLLFGRG+ AG+D RE+KK L K +KE E KK G E +E
Sbjct: 104 PQLLFGRGYIAGIDVRERKKHNFYDKLVQNRIQLCMKKKKEYEESGDKKWGKNESDKEYN 163
Query: 193 -----AAALKLKEEAADLYDT--------FDMRVD--------RHWSEKKLEEMTERDWR 231
L ++L + ++ +++ +HWSEKK E+MT+RDWR
Sbjct: 164 ENEDNIIGSNLTRYVSNLENNGLHRNQFIYEPKINNIIKDVDNKHWSEKKREDMTDRDWR 223
Query: 232 IFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
IFRED I KG +P P+R W E L+ +LL+A+++ Y+ P+PIQM AIP+ L+ RD+
Sbjct: 224 IFREDNEIYIKGGVVPPPIRKWEESNLSSDLLKAIKKAKYEKPTPIQMQAIPIALEMRDL 283
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
IGIAETGSGKTAAFVLPML+Y+ +LPP++ E +GPYA+++AP+RELA QI EET KFA
Sbjct: 284 IGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALIIAPSRELAIQIYEETNKFA 343
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
Y + V++VGG++ E Q F +R+G E+VI TPGRL DCLE+ Y VLNQCNYV++DEAD
Sbjct: 344 SYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVIIDEAD 403
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK-------RIYRTTYMFSATMPPAVE 464
RM+DMGFE V +LD +P+SNLK E++ L E+ R+YR T MFSATMPP+VE
Sbjct: 404 RMMDMGFEDAVHFILDNIPTSNLKSEDDALALQEEMMAKAGHRLYRLTQMFSATMPPSVE 463
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
RL+RKYLR P ++IG G I Q + + E +K +LQ LL E+ + IVFVN K
Sbjct: 464 RLSRKYLRAPAYISIGDPGAGKRSIEQKLEFITEGKKKQKLQELL-EIYEPPIIVFVNQK 522
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K AD++AK++ K+ ++ LHGGK QE RE +L F+ +++LVATDVAGRGID+ V
Sbjct: 523 KVADIIAKSISKMKFKAIALHGGKVQEMREEALNAFKNGEFDILVATDVAGRGIDVHGVK 582
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
VIN+D+P +I YTHRIGRTGRAG G+A +F+T DT +FYDL+Q LI SN+ VP EL
Sbjct: 583 LVINFDLPKDIASYTHRIGRTGRAGMKGLAISFVTEQDTHLFYDLRQFLISSNNIVPLEL 642
Query: 645 AKHEASKFKPGTI 657
A + AS+ KPGT+
Sbjct: 643 ANNPASQVKPGTV 655
>gi|339257348|ref|XP_003370044.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316965399|gb|EFV50121.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 1007
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/671 (48%), Positives = 438/671 (65%), Gaps = 58/671 (8%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQE----QQQQLLSQPQTHGRNSSDSRDRERER 69
KP+F ++AQRE AL+RRQ+Q+ + K++ E Q++ L + R RE
Sbjct: 378 KPVFQSRAQREAEALKRRQQQVEEMKKKAEELKKQRKGFLETARRAIDRDRYDRRDWREN 437
Query: 70 HRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWE 129
+R+R+++ K + +R+RE+ IKE+YLG K++ + + +F FDW+
Sbjct: 438 EKRQRDKDLKR----------DVDRDREVIAIKERYLGLAMKKRKRSRRLHERKFVFDWD 487
Query: 130 NTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK-LAAKNEKEMREEIRKKEGVEE 188
EDTS D N LY+ HE Q FGRG AG+D + QKK + KN+K +
Sbjct: 488 ANEDTSNDYNPLYKEKHEVQF-FGRGHVAGIDLKTQKKNQSQKNQKRLS----------- 535
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
+EA +D DRHW++K LEEMT+RDWRIFRED+NIS KG +P+
Sbjct: 536 ----------AKEAKQKWD------DRHWTQKSLEEMTDRDWRIFREDYNISIKGGNVPK 579
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P+R+W E E+L + ++GY P+PIQ AIP+GLQ RDVIG+AETGSGKTAAF++P
Sbjct: 580 PIRSWLEAGFPTEILDVIMKIGYTEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLIP 639
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
+L ++ EE+ +GPYAV+MAPTRELAQQIEEE KF LG++ VS++GG S E
Sbjct: 640 LLCFVM---IKREEDVDQGPYAVIMAPTRELAQQIEEEANKFGGPLGVRTVSVIGGLSRE 696
Query: 369 EQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDA 428
EQGF++R GCE+VIATPGRL+D LE RY VLNQC YV+LDEAD+M+DMGFEP V +L
Sbjct: 697 EQGFKLRMGCEIVIATPGRLVDVLENRYLVLNQCTYVILDEADKMLDMGFEPYVQNILSY 756
Query: 429 MPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
MP +NLKP+ E+ E DEK + +R T MF+ATM AVERLAR YLR P VV I
Sbjct: 757 MPVTNLKPDTEEAE-DEKALLNNFYSKKKFRQTVMFTATMSSAVERLARNYLRRPAVVYI 815
Query: 480 GTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGY 539
G GK TE + Q V M+ ESEK +L ++L++ + I+FVN KK AD++A+ L+KLG+
Sbjct: 816 GAIGKPTERVEQIVYMVSESEKRKKLVQILEKGIEPPIIIFVNQKKGADLLARGLEKLGF 875
Query: 540 RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 599
LHGGK Q+ R+ +L + ++LVATDVAGRGIDI DV+ V+NYDM +IE YT
Sbjct: 876 NPCALHGGKGQDARDYALASLKDGSKDILVATDVAGRGIDIKDVSLVLNYDMAKSIEDYT 935
Query: 600 HRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIP 658
HRIGRTGRAGK+G A TFLT D VFYDLKQ+L++S S P ELA H ++ KPG
Sbjct: 936 HRIGRTGRAGKSGKAITFLTKEDNQVFYDLKQLLLESPVSSCPAELANHPDAQKKPGQFV 995
Query: 659 DRPPRRNDTVF 669
+ R+++ VF
Sbjct: 996 VK-KRKDEVVF 1005
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 314/589 (53%), Positives = 414/589 (70%), Gaps = 24/589 (4%)
Query: 94 RERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFG 153
+E+E E IKE+YLG K K+RV + +++ +F FDW+ +EDT+ D N +Y++ H Q FG
Sbjct: 10 QEKEFEAIKERYLGIIKKKRRVRRLNDR-KFVFDWDASEDTAVDYNPIYKDKHTVQF-FG 67
Query: 154 RGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKL--KEEAADLYDTFDM 211
RG G+D + QKK +K E+ E R + EK +E LK ++E +D
Sbjct: 68 RGHVGGIDLKAQKKEQSKFYGELLERRRTQA---EKDQEVVRLKKIKRKEEKQKWD---- 120
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
DRHWS K LEEM ERDWRIFREDF+I+ KG +IP P+R W+E L +L ++ +GY
Sbjct: 121 --DRHWSHKSLEEMQERDWRIFREDFSITIKGGRIPNPLRKWSESGLPSSILDIIKELGY 178
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYA 330
K+P+PIQ AIP+GLQ RD+IG+AETGSGKT AF+LP+L +I+ LP I + +A+ GPYA
Sbjct: 179 KDPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWITSLPKIERQEDADQGPYA 238
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
++MAPTRELAQQI+EET KFA L I+ V+++GG S EEQGFR+R GCE+VIATPGRLID
Sbjct: 239 IIMAPTRELAQQIDEETTKFAKMLEIRSVAVIGGLSREEQGFRLRLGCEIVIATPGRLID 298
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI-- 448
LE RY VL++C Y+VLDEADRMIDMGFE +V +LD MP +N KP+ ++ E +EK +
Sbjct: 299 VLENRYLVLSRCTYIVLDEADRMIDMGFEGEVQKILDYMPVTNQKPDTDEAEDEEKLLAN 358
Query: 449 ------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
YR T MF+ATMPPAVERLAR YLR P +V IG+ GK E + Q V ++ ESEK
Sbjct: 359 FASKHKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGSVGKPVERVEQVVHLVTESEKR 418
Query: 503 SRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
+L LL+ + I+FVN KK AD++AK L+K+G+ TLHGGK QEQRE +L +
Sbjct: 419 RKLVELLNRGVEPPVIIFVNQKKGADVLAKGLEKMGFNACTLHGGKGQEQREFALASLKG 478
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
++LVATDVAGRGIDI +V+ VINYDM +IE YTHRIGRTGRAG G A +F+T D
Sbjct: 479 GTKDILVATDVAGRGIDIRNVSMVINYDMAKSIEDYTHRIGRTGRAGLHGKAVSFVTKDD 538
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+ +FYDLKQ+++ S S PPELA H ++ KPGT+ + RR + +FA
Sbjct: 539 SHLFYDLKQLILSSPVSTCPPELANHPDAQHKPGTVVTK-KRREEKIFA 586
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 333/680 (48%), Positives = 449/680 (66%), Gaps = 65/680 (9%)
Query: 15 PLFLTKAQREQLALERRQEQIA-----------QQKRRQEQQQQLLSQPQTHGRNSSDSR 63
P FL+KA+RE AL RRQ+++ ++K+ QE +++L PQ R R
Sbjct: 157 PKFLSKAEREAEALRRRQQEVEERQRLLEEERKKRKQFQEMGRKMLEDPQERERRERRER 216
Query: 64 DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR 123
+ E K RE E+++ +EL IKE+YLG K ++R +++ +
Sbjct: 217 MERETNGTEDEEGRQKIRE--------EKDKSKELHAIKERYLGGVKKRRRTRHLNDR-K 267
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
F F+W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+
Sbjct: 268 FVFEWDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KR 323
Query: 184 EGVEEKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
+EEK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+
Sbjct: 324 RTLEEKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITT 377
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
KG KIP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGK
Sbjct: 378 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 437
Query: 302 TAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L +I+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+
Sbjct: 438 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVA 497
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 498 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 557
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ MP +N KP+ ++ E EK + YR T MF+ATMPPAVERLAR+
Sbjct: 558 DVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARR-- 615
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
P VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++A
Sbjct: 616 --PAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLA 673
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM
Sbjct: 674 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVVNYDM 733
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE A TFLT D+ VFYDLKQ +++S S PPELA H +
Sbjct: 734 AKNIE-----------------AITFLTKEDSTVFYDLKQAILESPVSSCPPELANHPDA 776
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 777 QHKPGTILTK-KRREETIFA 795
>gi|281206116|gb|EFA80305.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 858
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/579 (54%), Positives = 402/579 (69%), Gaps = 42/579 (7%)
Query: 98 LELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFR 157
L IK++Y+G KK +K+ K SE+ RF F+W+ EDTS D N LY N E + FGRG
Sbjct: 316 LNDIKKEYIGEKKDRKKKPKKSERTRFVFEWDTAEDTSNDYNTLYANRQEVKPQFGRGVM 375
Query: 158 AGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHW 217
AG D ++ K + +EKE+ HW
Sbjct: 376 AGFDGQDSKG-KSDHEKELPPT------------------------------------HW 398
Query: 218 SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPI 277
S+K L+ MTERDWRIFREDFNIS KGS IP PMR+W E L E+L A+ ++GY+ PSPI
Sbjct: 399 SKKDLKLMTERDWRIFREDFNISTKGSGIPNPMRSWRESILPREILEAIAKMGYEKPSPI 458
Query: 278 QMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTR 337
QM AIP+ L RDV+GIAETGSGKTAAFV+PML YIS+ P +++E EA+GPYA+VMAPTR
Sbjct: 459 QMQAIPIALWGRDVLGIAETGSGKTAAFVIPMLVYISKQPRLNKETEADGPYALVMAPTR 518
Query: 338 ELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYA 397
ELA QIE+E FA++ G + V++VGGQ IE+Q F++ +GCE+VIATPGRL DCLE+RY
Sbjct: 519 ELALQIEKEARNFANHFGFRCVALVGGQPIEDQIFQLSKGCEIVIATPGRLNDCLEKRYL 578
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP----ENEDEELDEKRIYRTTY 453
VLNQCNYVVLDEAD MIDMGFEPQVV VLDAMPSS LK E E +E D RIYRTT
Sbjct: 579 VLNQCNYVVLDEADLMIDMGFEPQVVSVLDAMPSSFLKSENEEEAEKQETDANRIYRTTI 638
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDEL 512
++SATMPP VERL+RKYLR V V IG AGKA + I Q+VV +K + +K +L LL
Sbjct: 639 LYSATMPPKVERLSRKYLRRAVHVIIGEAGKAVDRIKQNVVFVKSDHDKRVQLMDLLSNG 698
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
I+FVN KK+ +++++ + + G T+LH +SQ+QRE++L+GF+ +RYNVL+ATD
Sbjct: 699 PPPPIIIFVNKKKHCEIISEIVSECGMTSTSLHSSRSQDQREMALDGFKRRRYNVLIATD 758
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VA RGI + V HVINYDMP NIE YTHRIGRTGRAG G+A++FLT DT++ YDLK M
Sbjct: 759 VASRGIHVEGVTHVINYDMPNNIEDYTHRIGRTGRAGMEGMASSFLTDKDTEIMYDLKNM 818
Query: 633 LIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
L +++ VP EL KH AS+ KPG++P+R R ++ +
Sbjct: 819 LTTTHNVVPAELLKHPASQLKPGSVPERQKRSETIIYTN 857
>gi|226468232|emb|CAX69793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Schistosoma japonicum]
Length = 606
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/585 (53%), Positives = 400/585 (68%), Gaps = 20/585 (3%)
Query: 96 RELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
+E + IKE+YLG K+ KR + + +F FDW+ +DTS+D N LY+ H+ Q FGRG
Sbjct: 29 QEEQAIKERYLGQKRLTKRRPRRLNERKFVFDWDAADDTSQDYNPLYKEKHQIQF-FGRG 87
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G+D ++QKK + ++ E R + V+EK + K EA +D D
Sbjct: 88 HIGGIDIKQQKKEIGRFYSKLLESRRSDTQKVQEKKRLSGVAK--REAKQKWD------D 139
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
RHW+EK L +MTERDWRIFREDF+IS KG IP P+R+WAE + EL +++VGY P
Sbjct: 140 RHWTEKALGQMTERDWRIFREDFSISTKGGNIPNPLRSWAEMNVADELKDVIKKVGYPEP 199
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVM 333
+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I RLP + E+ +GPYA++M
Sbjct: 200 TPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLNWIQRLPKLERLEDTEQGPYAIIM 259
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIEEETVKF LGIK VS++GG S E+Q ++R G E+VI TPGRL D LE
Sbjct: 260 APTRELAQQIEEETVKFGRPLGIKTVSLIGGLSREDQALKLRMGAEIVIGTPGRLNDVLE 319
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI----- 448
RY VLNQC Y+VLDEAD+MIDMGFEP+V +L +P +N KP+NED E D K +
Sbjct: 320 NRYMVLNQCTYIVLDEADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFAT 379
Query: 449 ---YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
YR T MF+ATMPPAVERLAR YLR P +V IG+AGK TE + Q V M+ E EK +L
Sbjct: 380 KHKYRQTVMFTATMPPAVERLARSYLRRPAMVYIGSAGKPTERVEQIVYMVSEQEKRRKL 439
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
+L D T FVN KK AD++AK L+KLGY LHGGK QEQRE +L ++ +
Sbjct: 440 LEILAAGLDPTCYYFVNQKKGADVLAKGLEKLGYSAVVLHGGKGQEQREYALASLKSGQK 499
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
+LVATDVAGRGIDI DV+ VINYDM I+ Y HRIGRTGRAGK+G+A + LT D V
Sbjct: 500 EILVATDVAGRGIDIKDVSMVINYDMSKTIDEYVHRIGRTGRAGKSGIAISLLTKEDAPV 559
Query: 626 FYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
FYDLKQ+LIQS S P ELA H ++ KPG + + R +TV+
Sbjct: 560 FYDLKQLLIQSPVSTCPHELANHPDAQTKPGVLAAKKRRAEETVY 604
>gi|449663558|ref|XP_002166443.2| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Hydra
magnipapillata]
Length = 632
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 314/592 (53%), Positives = 419/592 (70%), Gaps = 21/592 (3%)
Query: 89 LAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA 148
L R+RE+ELE IK +YLG K KK++ + ++K +F FDW+ +EDTS+D NALY+ HEA
Sbjct: 52 LKGRDREKELEAIKNRYLGVIKKKKKIRRLNDK-KFVFDWDTSEDTSQDYNALYRERHEA 110
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
LLFGRG +AG+D + QKK + E+ M + + E ++E + +++ +
Sbjct: 111 -LLFGRGNKAGIDIKVQKKESKFYEQLMEKRRTESEKLQEIKNSNRIIAKEDKLS----- 164
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
+RHW K+L EMT+RDWRIF+EDF+IS KG KIP P+R W + L ++L +
Sbjct: 165 ---HKERHWKMKELHEMTDRDWRIFKEDFSISAKGGKIPNPIRYWRDSSLPNDILDVILS 221
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-G 327
+GY +P+PIQ AIP+GL RD+IGIAETGSGKTAAFV+P+L +I+ LP ++ ++ G
Sbjct: 222 LGYTDPTPIQRQAIPIGLMNRDIIGIAETGSGKTAAFVIPLLVWITGLPESDRQSVSDNG 281
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P+A+++APTRELAQQIEEET+KFA LGI+ V+++GG S E+QGF++R GCE+VIATPGR
Sbjct: 282 PFAIILAPTRELAQQIEEETIKFAKKLGIRTVAVIGGLSREDQGFQLRLGCEIVIATPGR 341
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE----- 442
LID LE RY VL+QC+YVV+DEADRMIDMGFEP V +L+ +P +N+KP+ E+ E
Sbjct: 342 LIDVLENRYLVLSQCSYVVMDEADRMIDMGFEPDVQKILEHLPVTNIKPDTEEAEDVNVI 401
Query: 443 ---LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKES 499
K YR T MF+ATMPP VERLAR YLR P +VTIG+AGK + + Q V M+ +
Sbjct: 402 AKNYSSKDKYRQTVMFTATMPPVVERLARTYLRRPAIVTIGSAGKPVDRVEQKVYMLSAA 461
Query: 500 EKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEG 559
+K +L +L D +VFVN KK AD++AK+L+K G+ TTLHGGK QEQRE +L
Sbjct: 462 QKKKKLLEILSNKLDPPVLVFVNQKKGADVLAKSLEKQGFSATTLHGGKGQEQREFALNS 521
Query: 560 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
+ ++LVATDVAGRGIDI DV+ VINYDM NIE YTHRIGRTGRAGK+G+A TFLT
Sbjct: 522 LKEGNKDILVATDVAGRGIDIKDVSMVINYDMAKNIESYTHRIGRTGRAGKSGIAVTFLT 581
Query: 620 FHDTDVFYDLKQ-MLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
D++VFYDLKQ +L S S P EL H ++ KPGT+ + RR +T+F
Sbjct: 582 QEDSEVFYDLKQLLLSSSASSCPSELMNHPDAQHKPGTVLTK-KRREETIFV 632
>gi|167533855|ref|XP_001748606.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772847|gb|EDQ86493.1| predicted protein [Monosiga brevicollis MX1]
Length = 698
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 317/606 (52%), Positives = 428/606 (70%), Gaps = 22/606 (3%)
Query: 65 RERERHRREREEEAKARERARLEKLA---ERERERELELIKEQYLGSKKPKKRVIKPSEK 121
+E+E + ++ E +AR+ E LA E ER EL+ I+++Y G ++ K+++ + ++K
Sbjct: 90 QEKELRDKRKQLEREARDARFGEGLAWQTEDERNAELKDIRKRYFGRQREKRKIRRMNDK 149
Query: 122 FRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIR 181
+F FDW+ +DTS D N LY+ HE QL FGRG AG+D +Q K + + M E+ R
Sbjct: 150 -KFVFDWDEKDDTSTDYNPLYKEKHEVQL-FGRGHIAGIDVVQQLKDKGEFYEAMLEKRR 207
Query: 182 KKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD-RHWSEKKLEEMTERDWRIFREDFNIS 240
+E ++ EAA + +A D R D RHWSEK L+EMT RDWRIFREDFNI+
Sbjct: 208 SEE--QKATHEAAR---RRDARDQAKMAKQRHDTRHWSEKPLDEMTNRDWRIFREDFNIA 262
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
KG IP P+R+W E L PE+L+A++++G++NP+PIQ AAIP+GL RD+IG+AETGSG
Sbjct: 263 CKGGNIPPPLRSWDEAGLNPEMLKAIQKLGFENPTPIQRAAIPIGLNNRDIIGVAETGSG 322
Query: 301 KTAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVV 359
KT AFVLP+L +I LP + E + + GPYAV++APTR+LAQQIE+E KFA LG+++V
Sbjct: 323 KTLAFVLPLLNWIISLPQLVREQDIDNGPYAVILAPTRDLAQQIEDEANKFARPLGVRLV 382
Query: 360 SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
S++GG S E+Q F++ QGCEVVIATPGRLID L+ Y VLNQC+Y+V+DEADRM+DMGFE
Sbjct: 383 SVIGGHSREDQSFKLNQGCEVVIATPGRLIDVLDNHYMVLNQCSYIVMDEADRMLDMGFE 442
Query: 420 PQVVGVLDAMPSSNLKP---ENEDEEL-----DEKRIYRTTYMFSATMPPAVERLARKYL 471
P+V +L+ +P SN+KP E ED+ L K YR T +F+ATMP +VERLAR YL
Sbjct: 443 PEVQRILEYIPVSNMKPDTDEAEDQHLLAENSRNKAKYRQTVLFTATMPTSVERLARTYL 502
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P V IG AG+A + + Q V+M+ E +K + L +LLD + + I+FVN KK AD++
Sbjct: 503 RRPATVNIGVAGRAADRVEQRVLMLSEKQKRNELVKLLDSM-EPPVIIFVNQKKGADVLT 561
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GYR + LHGGKSQ+ RE +L + K ++LVATDVAGRGIDI ++ VINYDM
Sbjct: 562 KSLEKMGYRASALHGGKSQDLRERALSQLKDKTKDILVATDVAGRGIDIKGISMVINYDM 621
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEAS 650
NIE YTHRIGRTGRAG +GVA TFLT D+ VF+DLK+ML S NS P EL +H +
Sbjct: 622 AKNIEDYTHRIGRTGRAGSSGVAVTFLTEEDSKVFWDLKEMLKSSKNSVCPRELEQHPEA 681
Query: 651 KFKPGT 656
+ KPGT
Sbjct: 682 QHKPGT 687
>gi|403224137|dbj|BAM42267.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 776
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 307/617 (49%), Positives = 418/617 (67%), Gaps = 56/617 (9%)
Query: 86 LEKLAERER-----ERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-D 137
L KL E+E E+ELE I+ YLG + KK+V KPSEKF+ F+F+W+++EDT++ D
Sbjct: 159 LLKLPEKEVRDKLIEKELEQIRHHYLGMNRQKKKVQKPSEKFKTIFNFEWDDSEDTTKFD 218
Query: 138 MNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALK 197
N +YQN E QLLFGRGFRAG D REQ+K +E+ K+ E PE + ++
Sbjct: 219 NNPIYQNRPEPQLLFGRGFRAGFDVREQRK-----RNNFYDELSKRRA--ENPEWSESMS 271
Query: 198 LKEEAADLYDTFDMR----VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
++ A D++ + HW++KK EMT+RDWRIFREDF+I KG ++P P+R W
Sbjct: 272 RQQLDATARKARDLQEAELANTHWTQKKRSEMTDRDWRIFREDFDIYIKGGRVPPPIRTW 331
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
AE L ELL ++++ GY P+PIQM AIP+ L+ RD+IGIA TGSGKTAAFVLPMLTY+
Sbjct: 332 AESPLPWELLESIKKAGYTKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYV 391
Query: 314 SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFR 373
LPP+ +E +GPYA+VMAP+RELA QI +ET KF+ Y + V++VGG+S E Q F
Sbjct: 392 KMLPPLDDETSMDGPYALVMAPSRELALQIYDETNKFSTYCTCRSVAVVGGRSAEAQAFE 451
Query: 374 IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSN 433
+R+GCE++I TPGR+ DCL+R Y VL+QCNYVVLDEADRMIDMGFE V +LD +P++N
Sbjct: 452 LRKGCEIIIGTPGRIKDCLDRAYTVLSQCNYVVLDEADRMIDMGFEDVVNEILDCIPTTN 511
Query: 434 LKPENEDEELDEK-------RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
LK ++E + L+++ R YR T MFSATMP AVE+L +KYLR P ++IG G
Sbjct: 512 LKDDDESKALEQELSTKAGHRRYRITQMFSATMPAAVEKLTKKYLRAPCFISIGDVGAGK 571
Query: 487 ELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGY------- 539
I+Q + + ES+K +L+ +L+ L + IVFVN KK D++AKN+ K+GY
Sbjct: 572 SSITQKLEFVAESKKRQKLEEVLEHL-EPPIIVFVNLKKVTDVIAKNISKIGYRYHPIEL 630
Query: 540 ----------------------RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
R +LHGGK+QE RE +L F++ +Y++LVATDVAGRG
Sbjct: 631 LLIPTSTTISISKTYNTKQCSCRAVSLHGGKNQESREDALNKFKSGQYDILVATDVAGRG 690
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+D+ V VINYDMP +I+ YTHRIGRTGRAG G++ +F+T DT +FYDLKQ+L+ ++
Sbjct: 691 LDVEGVKAVINYDMPKDIQSYTHRIGRTGRAGLKGLSISFVTEADTALFYDLKQLLVSTD 750
Query: 638 SPVPPELAKHEASKFKP 654
+ VP EL++H ASK KP
Sbjct: 751 NAVPQELSQHPASKVKP 767
>gi|221056985|ref|XP_002259630.1| snrnp protein [Plasmodium knowlesi strain H]
gi|193809702|emb|CAQ40404.1| snrnp protein, putative [Plasmodium knowlesi strain H]
Length = 1001
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 330/705 (46%), Positives = 453/705 (64%), Gaps = 74/705 (10%)
Query: 30 RRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRREREEEAKARERARLEKL 89
RR + Q+ RR++ + ++ Q+ GR ++R+ R R E A + + L +L
Sbjct: 294 RRNSESNQEIRRRKLSSEDSTEEQSDGR-VGNARNGGRGVESRLSETSAYTKVESSLAEL 352
Query: 90 A---------ERERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-D 137
E +RE+ELE+IK+QYLG K KK++ KPSEKFR F+F+W+ +EDTSR D
Sbjct: 353 NMLNISAIERESQREKELEIIKQQYLGLNKKKKKMQKPSEKFRNIFNFEWDQSEDTSRND 412
Query: 138 MNALYQNPHEAQLLFGRGFRAGM------------DRREQKKLAAKNEKEMREEIRKKEG 185
N LYQN E QLLFGRG+ AG+ D+ Q ++ +K E+ +++
Sbjct: 413 TNPLYQNRLEPQLLFGRGYIAGIDVREQRKKNNFYDKLVQNRINFSVKKGRMEDNSQRKD 472
Query: 186 VEEKPEEAAALKLKEEAA------DLYDT------------------------FDMRVD- 214
+ A + EA+ DL +T ++ +V+
Sbjct: 473 LNHGGGTKAGSNTENEASSHVGMSDLANTPNPIEHLTNANNQSLSRSKTGEFIYEPKVNN 532
Query: 215 -------RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
+HWSEKK EEMT+RDWRIFRED I KG +P P+R W E L+ +LL+A++
Sbjct: 533 IIVDVHNKHWSEKKREEMTDRDWRIFREDNEIYIKGGIVPAPIRRWEESNLSSDLLKAIK 592
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
+ Y+ P+PIQM AIP+ L+ RD+IGIAETGSGKTAAFVLPML+Y+ +LPP++ E +G
Sbjct: 593 KAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDG 652
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
PYA+++AP+RELA QI +ET KFA Y + V++VGG++ EEQ F +R+G E++I TPGR
Sbjct: 653 PYALIIAPSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEEQAFELRKGVEIIIGTPGR 712
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK- 446
+ DCLE+ Y VLNQCNYV+LDEADRM+DMGFE V +LD +P+SNLK E+E L E+
Sbjct: 713 IQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKIPTSNLKSEDEALALQEEM 772
Query: 447 ------RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
R+YR T MFSATMPPAVERL+RKYLR P ++IG G I Q + + E +
Sbjct: 773 MAKAGHRLYRLTQMFSATMPPAVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFITEGK 832
Query: 501 KFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
K +LQ +L E+ + IVFVN KK AD++AK++ K+ +R LHGGK+QE RE +L F
Sbjct: 833 KKQKLQEVL-EVYEPPIIVFVNQKKVADIIAKSISKMKFRAVALHGGKAQELREQTLNSF 891
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
+ +++LVATDVAGRGID+ V VIN+DMP +IE YTHRIGRTGRAG G+A +F+T
Sbjct: 892 KNGDFDILVATDVAGRGIDVQGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFVTE 951
Query: 621 HDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTI---PDRPP 662
D+++FYDLKQ LI SN+ VP ELA + ASK KPG++ P +PP
Sbjct: 952 QDSNLFYDLKQFLISSNNIVPMELANNPASKVKPGSVMHTPKKPP 996
>gi|71028514|ref|XP_763900.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68350854|gb|EAN31617.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 744
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 298/585 (50%), Positives = 411/585 (70%), Gaps = 33/585 (5%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHEAQLL 151
E+ELE I+ YLG K KK+V+KPSEKF+ F+F+W+ +EDT++ + N +YQ+ E QLL
Sbjct: 180 EKELEQIRLHYLGLNKEKKKVLKPSEKFKTIFNFEWDESEDTTKFENNPIYQDRPEPQLL 239
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKK--EGVEEKPEEAAALKLKEEAADLYDTF 209
FGRGFRAG+D REQ+K + +E+ +K E + P+ EE +++
Sbjct: 240 FGRGFRAGIDVREQRK-----KNNFYDELSRKRAELPQTTPKPPEPTPKHEEESEV---- 290
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
+ HW++KKL EMTERDWRIFREDF I KG ++P P+R WAE L ELL A+++
Sbjct: 291 ---LSNHWTKKKLSEMTERDWRIFREDFEIYIKGGRVPPPIRTWAESPLPWELLEAIKKA 347
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
GY P+PIQM AIP+ L+ RD+IGIA TGSGKTAAFVLPMLTY+ +LPP+ +E +GPY
Sbjct: 348 GYIKPTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKLPPLDDETSLDGPY 407
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A+V+AP+RELA QI +ETVKF+ + + V++VGG++ E Q F +R+GCE++I TPGR+
Sbjct: 408 ALVLAPSRELALQIYDETVKFSAFCSCRSVAVVGGRNAETQAFELRKGCEIIIGTPGRVK 467
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK--- 446
DCL+R Y VL+QCNYV+LDEADRMIDMGFE + +LD +PS+NLK +E L ++
Sbjct: 468 DCLDRAYTVLSQCNYVILDEADRMIDMGFEDVLKYILDCIPSTNLKDRDESSALQQELST 527
Query: 447 ----RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
R YR T+MFSATMPPAVE+L ++YLR P ++IG G I+Q + ++ES+K
Sbjct: 528 KAGHRRYRITHMFSATMPPAVEKLTKRYLRAPAFISIGDVGGGKTSITQRLDFVQESKKT 587
Query: 503 SRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
L+ L+ L + I+FVN KKN D++AK++ K+ +LHGGK+QE RE +L F++
Sbjct: 588 RHLEETLETL-EPPIIIFVNLKKNTDVIAKHITKIA---VSLHGGKTQESREDALNNFKS 643
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
Y++LVATDV GRG+D+ + VINYDMP +I+ YTHRIGRTGRAG G++ +F+T D
Sbjct: 644 GVYDILVATDVVGRGLDVEGIKCVINYDMPKDIQTYTHRIGRTGRAGLKGLSISFVTDAD 703
Query: 623 TDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDT 667
D+FYDL+Q+LI +++ VP EL++H ASK KP P RN T
Sbjct: 704 VDLFYDLRQLLISTDNIVPLELSQHPASKVKPNQ-----PHRNIT 743
>gi|430812346|emb|CCJ30211.1| unnamed protein product [Pneumocystis jirovecii]
Length = 891
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 332/676 (49%), Positives = 435/676 (64%), Gaps = 48/676 (7%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQ------------EQQQQLLSQPQTHGRNSSD 61
+P FLT+ QRE +ALE+R+ ++ +KR+Q + Q LS + GR +
Sbjct: 205 RPKFLTREQREAIALEKRRLEV--EKRQQIGKTDIIRKYSLKDSQDNLSGKEKDGRYLNR 262
Query: 62 SRDRERERHRREREEEAKARERARLEKLAERER--------ERELELIKEQYLGSKKPKK 113
++ E +E++A A++ A L K ++ + E+E+E I+++YLG+ KK
Sbjct: 263 NKMIPTEPKAMRKEQDALAKQAAELFKSSKNQEAKAEMTPEEKEVEDIRKRYLGTGDNKK 322
Query: 114 RVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNE 173
+ K SE+ +F FDW+NTEDTS D+N +Y N H AQ L GRG G D +
Sbjct: 323 KKRKTSER-KFVFDWDNTEDTSSDVNPIYLNRHSAQFL-GRGRLGGFDDKSNNHYT---- 376
Query: 174 KEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIF 233
++ + G +E A L E ++D D+HWSEK LE M ERDWRIF
Sbjct: 377 -NSFIDMLVRSGNDEDKNRAKQLMDMEYKKSTRISWD---DKHWSEKPLELMKERDWRIF 432
Query: 234 REDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIG 293
+EDFNIS KG IP P+RNW E L +L VE VGYK PSPIQ AAIP+GLQ RD+IG
Sbjct: 433 KEDFNISSKGGSIPNPIRNWKESGLPKIILDMVEIVGYKEPSPIQRAAIPIGLQNRDIIG 492
Query: 294 IAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
IAETGSGKTA+FVLPML YIS LPP+ E N+ +GPYA+++APTRELAQQIE ET KF+
Sbjct: 493 IAETGSGKTASFVLPMLVYISTLPPLDEYNKNDGPYAIILAPTRELAQQIESETKKFSEP 552
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
+ VSIVGG IEEQ F +R G +VIATPGRL+DCLER VL+QC Y+VLDEADRM
Sbjct: 553 MDFVCVSIVGGHKIEEQAFNLRDGVHIVIATPGRLLDCLERHVLVLSQCAYIVLDEADRM 612
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVER 465
IDMGFE V +LDA+P N KP+N+D E + K +R T MFSATMPPAVE+
Sbjct: 613 IDMGFEETVNKLLDALPVHNQKPDNDDAENPVLMSKIIGGKERFRQTVMFSATMPPAVEK 672
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELG-DKTAIVFVNT 523
LA+KYLR P +VTIG AG+A + + Q V MM E +K RL+ LL+ + I+F+N
Sbjct: 673 LAKKYLRRPAIVTIGNAGQAVDTVVQIVEMMNTEDKKRRRLEELLNSNDYNPPVIIFINQ 732
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
+++ D +AK+L ++G+ TLHGGKSQEQRE +L R+ + LVATD+AGRGID+ DV
Sbjct: 733 RRSCDALAKSLARIGWNAVTLHGGKSQEQREAALAQLRSGEADCLVATDLAGRGIDVADV 792
Query: 584 AHVINY-----DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN- 637
+ V+ + +P YTHRIGRTGRAGK+G A TFLT DTD+ YDLKQ + +S+
Sbjct: 793 SLVVPFFFDSRILPHLYTDYTHRIGRTGRAGKSGTAITFLTPEDTDIMYDLKQTISKSSI 852
Query: 638 SPVPPELAKHEASKFK 653
S VP L HEA++ K
Sbjct: 853 SKVPDWLRMHEAAQRK 868
>gi|32565321|ref|NP_498260.2| Protein DDX-23 [Caenorhabditis elegans]
gi|351058526|emb|CCD65989.1| Protein DDX-23 [Caenorhabditis elegans]
Length = 730
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/579 (53%), Positives = 401/579 (69%), Gaps = 19/579 (3%)
Query: 101 IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM 160
+K++YLG +K KK+ + + +F FDW+ EDTS+D N LYQ+ HE Q FGRG AG
Sbjct: 159 VKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTSQDYNKLYQSRHEIQF-FGRGSVAGT 217
Query: 161 DRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEK 220
D QKK +EM E R V+EK +E L+ + + DRHW K
Sbjct: 218 DVNAQKKEKNSFYQEMMENRRT---VDEKEQEMHRLEKELKKEKKV----AHDDRHWRMK 270
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+L EM++RDWRIFREDFNIS KG ++PRP+RNW E E+ +AV+ +GY P+PIQ
Sbjct: 271 ELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQ 330
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTREL 339
AIP+GLQ RDVIG+AETGSGKTAAF+LP+L +I+ LP + +E+ GPYA++MAPTREL
Sbjct: 331 AIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL 390
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQIEEET KF LGIK VS++GG S E+QG ++R G EVVIATPGRL+D LE RY +L
Sbjct: 391 AQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLL 450
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI--------YRT 451
NQC YV+LDEADRM+DMGFEP V VL+ MP +N+K + ++ + +E + YR
Sbjct: 451 NQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQ 510
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T MF+ATM A+ERLAR+YLR P VV IG+AGK TE + Q V M+ E K +L +L+
Sbjct: 511 TVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLES 570
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
I+FVN KK ADM++K L KLG++ T LHGGK Q+QRE +L+ + ++LVAT
Sbjct: 571 QFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVAT 630
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
DVAGRGID+ DV+ V+NYDM +IE YTHRIGRTGRAGK G A TFLT DT V++DLKQ
Sbjct: 631 DVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQ 690
Query: 632 MLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
+L++S S PPELA H ++ KPG + R+++T+F
Sbjct: 691 VLVESPVSSCPPELANHPDAQSKPGVFTSK-KRQDETLF 728
>gi|325189223|emb|CCA23746.1| DEAD box helicase putative [Albugo laibachii Nc14]
Length = 809
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 340/717 (47%), Positives = 441/717 (61%), Gaps = 89/717 (12%)
Query: 10 SNNKKPLFLTKAQREQLALERRQEQIAQQK---------RRQEQQQQLLSQPQTHGRNSS 60
+N K F +K +REQ AL R Q Q Q++ RRQ + S+P T R++S
Sbjct: 90 ANAHKVRFRSKEEREQDALARLQAQRDQKEEERKKAEALRRQFLKSHSSSRPST--RHTS 147
Query: 61 DSRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSE 120
S D R+R R+ + R ++ + L+ +K+QYLG K KK+++K SE
Sbjct: 148 SSIDTHRKREAGSRDTPSNDTGRNQV---------KALQALKDQYLGKKVNKKKIVKASE 198
Query: 121 KFR--FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQ-KKLAAKNEKEMR 177
KF F FDW+ +EDTS D+N +Y N + LL+GRG+RAG+D REQ KK + NE ++
Sbjct: 199 KFAKIFQFDWDTSEDTSNDLNPVYANRLDVNLLYGRGYRAGVDLREQRKKNSFLNELSLK 258
Query: 178 EEIRKKEGVEEKPEEAAAL----------------KLKEEAADLYDTFDMR----VDRHW 217
R+KE E + ++K L + HW
Sbjct: 259 ---RQKEHHAADAENSTLTSEQVEERQRERERELSRMKARERQLIQAMASKEAELTGTHW 315
Query: 218 SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE-LLRAVERVGYKNPSP 276
+EK ++EM ERDWRIFREDF+I+ KG + P+RNW E L PE L +A++ + ++ PSP
Sbjct: 316 TEKSVDEMKERDWRIFREDFDITIKGGRASHPLRNWKEASLLPEALFKAIQEMRFERPSP 375
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAP 335
IQM AIP+GL +RD+IGIAETGSGKTAAF++P++ Y+ LP + E E GP A++MAP
Sbjct: 376 IQMQAIPIGLAKRDIIGIAETGSGKTAAFLIPIIAYLYHLPAVMLERTGEQGPLALIMAP 435
Query: 336 TRELAQQIEEETVKFAHYLGIKVV---------SIVGGQSIEEQGFRIRQGCEVVIATPG 386
TRELA QIE+E +K + + VV S+VGGQSIE+Q F++RQG +++I TPG
Sbjct: 436 TRELALQIEQEAIKLCKHTQVGVVGSQNRIRTLSVVGGQSIEDQAFKLRQGVDIIIGTPG 495
Query: 387 RLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK 446
RL+DC+E Y VLNQCNYVVLDEADRMIDMGFEPQVV VLD M S LK ENE+E EK
Sbjct: 496 RLMDCMESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLDNM-GSLLKSENEEEM--EK 552
Query: 447 RI----------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGT--AGKATELISQHVV 494
++ YR T MFSATMP VERLA+ YLR+P ++ IG +GK + I Q VV
Sbjct: 553 QLERANNAQEFRYRVTMMFSATMPTEVERLAKTYLRHPAIIKIGDEDSGK-NKRIEQRVV 611
Query: 495 MMKESEKFSRLQRLLDE----------------LGDKTAIVFVNTKKNADMVAKNLDKLG 538
+ +K RLQ LL E + + +VFVN KK D++ K L + G
Sbjct: 612 FLNSGKKKLRLQHLLHETLSSSGQVRISRKEKVVDGQKVMVFVNIKKECDVLGKYLAQEG 671
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
+R T LHGGKSQEQRE SL GFR +VLVATDVAGRG+DIPDV HV+NYD+P IE Y
Sbjct: 672 FRTTILHGGKSQEQREESLRGFREGFCDVLVATDVAGRGLDIPDVTHVVNYDLPSKIENY 731
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPG 655
HRIGRTGRAGK GVA +FLT D ++ YDLKQ LI +N PVP ELA H +K G
Sbjct: 732 CHRIGRTGRAGKEGVAISFLTNEDEEIMYDLKQYLISTNMPVPQELASHPMAKAAAG 788
>gi|308497408|ref|XP_003110891.1| CRE-DDX-23 protein [Caenorhabditis remanei]
gi|308242771|gb|EFO86723.1| CRE-DDX-23 protein [Caenorhabditis remanei]
Length = 766
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 317/592 (53%), Positives = 410/592 (69%), Gaps = 34/592 (5%)
Query: 101 IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM 160
+K++YLG +K KK+ + + +F FDW+ EDTS+D N LYQ+ HE Q FGRG AGM
Sbjct: 184 VKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTSQDYNKLYQSRHEIQF-FGRGSVAGM 242
Query: 161 DRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEK 220
D QKK +EM E R+ E +E+ + +LK+E +D DRHW K
Sbjct: 243 DVNAQKKEKNSFYQEMMEH-RRTEDEKEQEKSRLEKELKKEKKVAHD------DRHWRMK 295
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+L EMT+RDWRIFREDFNIS KG ++PRP+RNW E E+ +AV+ +GY P+PIQ
Sbjct: 296 ELSEMTDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPSEVYQAVKEIGYMEPTPIQRQ 355
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTREL 339
AIP+GLQ RDVIG+AETGSGKTAAF+LP+L +I+ LP + +E+ GPYA++MAPTREL
Sbjct: 356 AIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL 415
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQIEEET KF L IK VS++GG S EEQG ++R G EVVIATPGRL+D LE RY +L
Sbjct: 416 AQQIEEETNKFGKLLDIKTVSVIGGASREEQGMKLRMGVEVVIATPGRLLDVLENRYLLL 475
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE--------KRIYRT 451
NQC YV+LDEADRM+DMGFEP V VL+ +P+SN+K + ++ + +E ++ YR
Sbjct: 476 NQCTYVILDEADRMLDMGFEPDVQKVLEYLPASNMKKDTDEFDNEEALMKGFQTRQKYRQ 535
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQ--------HVVMMKESEKFS 503
T MF+ATM PA+ERLAR+YLR P VV IG+AGK TE + Q +V M SE+
Sbjct: 536 TVMFTATMSPAIERLARQYLRRPAVVHIGSAGKPTERVEQVCFFAYFIFIVYMVTSER-- 593
Query: 504 RLQRLLDEL---GDKTAIVFVNTKKNADMVAKNLDKLG--YRVTTLHGGKSQEQREISLE 558
+ ++L+D L D+ I+FVN K+ AD++AK L + +R + LHGGK QE RE +L+
Sbjct: 594 KKKKLIDILMVETDRPIIIFVNQKRGADVLAKGLVSVNPEFRASVLHGGKGQEAREYALQ 653
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
++ +LVATDVAGRGIDI DVA VINYDM IE YTHRIGRTGRAGK G A TFL
Sbjct: 654 SLKSGESKILVATDVAGRGIDIKDVALVINYDMAKTIEDYTHRIGRTGRAGKHGKAITFL 713
Query: 619 TFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
T DT VFYDLKQ+L++S S PPELA HEA++ KPG + R+++T+F
Sbjct: 714 TQDDTAVFYDLKQVLLESPVSSCPPELANHEAAQGKPGQYTSK-KRQDETLF 764
>gi|328868659|gb|EGG17037.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 834
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 304/575 (52%), Positives = 393/575 (68%), Gaps = 41/575 (7%)
Query: 101 IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM 160
IK +Y G KK K+ K SE+ RF F+W+ EDTS D NALY N +A+ FGRG G
Sbjct: 295 IKNEYYGEKKEAKKKPKKSERTRFVFEWDAAEDTSSDYNALYTNKVQAKPQFGRGVMGGF 354
Query: 161 DRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEK 220
+ ++ + + EK++ HWS+K
Sbjct: 355 ESTSRRLPSGEPEKDVPST------------------------------------HWSKK 378
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT+RDWRIF+EDFNIS KG IP P+R W E L ++L A+ + GY+ PSP+QM
Sbjct: 379 DLRSMTDRDWRIFKEDFNISTKGGSIPNPIRTWRESSLPADMLEAIAKQGYEKPSPVQMQ 438
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP+ L RDV+GIAETGSGKTAAFV+PML YIS+ P +++E+E +GPYAVVMAPTRELA
Sbjct: 439 AIPVALSGRDVLGIAETGSGKTAAFVIPMLVYISKQPRMTKESEQDGPYAVVMAPTRELA 498
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QIE+E FA++LG + V++VGGQ IEEQ +++ +GCE+VIATPGRL DCLE+RY VLN
Sbjct: 499 LQIEKEARVFANFLGYRTVALVGGQPIEEQIYQLSKGCEIVIATPGRLNDCLEKRYLVLN 558
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL----DEKRIYRTTYMFS 456
QCNYVVLDEAD MIDMGFE QV VLDAMPS+ LK ENE+E D R+YRTT ++S
Sbjct: 559 QCNYVVLDEADMMIDMGFELQVESVLDAMPSAFLKSENEEEAEKQERDRHRVYRTTILYS 618
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDK 515
ATMPP VERL+RKYLR PV V IG AGKA + I Q V+ +K +++K ++ LL
Sbjct: 619 ATMPPKVERLSRKYLRRPVHVIIGEAGKAVDRIKQTVIFVKSDNDKHQQMSSLLTSGPPP 678
Query: 516 TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
IVFVN KK+ +++ + + + G T+LH G+SQEQRE++LEGF+ ++Y VL+ATDVA
Sbjct: 679 PIIVFVNKKKHCEIIMEIVQECGLSSTSLHSGRSQEQREMALEGFKKRKYGVLIATDVAS 738
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RGI + V HVINYDMP NIE YTHRIGRTGRAG G+A++ +T DT++ Y+LK ML
Sbjct: 739 RGIHVEGVTHVINYDMPNNIEDYTHRIGRTGRAGMEGLASSLITDKDTEIMYNLKNMLTN 798
Query: 636 SNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+N+ VP EL KH AS+ KPG++PDR R +F+
Sbjct: 799 TNNIVPNELIKHPASQIKPGSVPDRQKRSETVIFS 833
>gi|348672465|gb|EGZ12285.1| hypothetical protein PHYSODRAFT_361512 [Phytophthora sojae]
Length = 836
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 352/728 (48%), Positives = 455/728 (62%), Gaps = 91/728 (12%)
Query: 15 PLFLTKAQREQLALER----RQEQIAQQK-----RRQEQQQQLLSQPQTHGRNSSDSRDR 65
P F +KAQR++ ALER RQE Q+K RRQ Q+Q + + GR S + DR
Sbjct: 94 PKFRSKAQRQKDALERLEKKRQEMDKQRKEAEDARRQFLQRQRSERDRERGRGSRSNGDR 153
Query: 66 ERE-------RHRREREEEAKARERARLE---KLAERERERELELIKEQYLGSKKPKKRV 115
R+ R R + A +++E L + + L+ +K+QYLG KK+V
Sbjct: 154 RRDDRAVADSRDRGDARRGAADSSSSKVEGKPALLDPSEAKALQALKDQYLGKTVKKKKV 213
Query: 116 IKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNE 173
+K SEKF F FDWE +EDTS D+N LY + LL+GRG+RAG+D REQ+K + E
Sbjct: 214 VKASEKFSKIFQFDWEASEDTSTDLNPLYAKRMDVNLLYGRGYRAGVDMREQRKKNSFLE 273
Query: 174 KEMREEIRKKEGVEEK-----PEEAAALKLKEEAADLYDTFDMRVDR------------- 215
+ R+ ++++ +E E+ AA K + E A L + DR
Sbjct: 274 ELSRKRQKEQQLADETDGSLTSEQIAARKQERERA-LRNMQARERDRMQEMASREAKTMG 332
Query: 216 -HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE-GKLTPE-LLRAVERVGYK 272
HWSEK L+EM ERDWRIFREDF+I+ KG + P P+R W E G L P+ + +A++ +G++
Sbjct: 333 THWSEKLLDEMKERDWRIFREDFDITLKGGRAPNPLRKWDEAGNLLPDAVFKAIKDLGFE 392
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYAV 331
PSPIQM AIP+GLQ+RD+IGIAETGSGKTAAFV+P++ YI LPP E GP A+
Sbjct: 393 RPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPPAMVARTGEQGPLAL 452
Query: 332 VMAPTRELAQQIEEETVKFAHY--------LG-IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
VMAPTRELA QIE+E +K Y LG IK +S+VGGQSIE+QGFR+R+G +++I
Sbjct: 453 VMAPTRELALQIEQEAIKLCKYTSVGQPEKLGPIKTLSVVGGQSIEDQGFRLREGVDIII 512
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE- 441
TPGRL+DCLE Y VLNQCNYVVLDEADRMIDMGFEPQVV VL+ M S LK ENE+E
Sbjct: 513 GTPGRLMDCLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENM-GSLLKSENEEEM 571
Query: 442 --------------ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGT--AGKA 485
EL + R T MFSATMP VERLA+ +LR+P +V IG +GK
Sbjct: 572 EQQLTLANGAQPGEELQHR--LRVTTMFSATMPVEVERLAKTFLRHPSIVKIGDEDSGK- 628
Query: 486 TELISQHVVMMKESEKFSRLQRLL-DELGDKTA----------------IVFVNTKKNAD 528
+ I Q V+ M +K S+L +L D L ++ IVFVN KK D
Sbjct: 629 NKRIDQRVLFMNPGKKRSKLVEVLRDILSAQSVPLPRSRKEKVVDGAKIIVFVNIKKECD 688
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
VAK + G+R T LHGGK+Q+QRE SL+ FR ++LVATDVAGRG+DIPDV HV+N
Sbjct: 689 SVAKFISSEGFRCTILHGGKTQDQREESLKMFREGYCDMLVATDVAGRGLDIPDVTHVVN 748
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D+P I+ YTHRIGRTGRAGK GVA +FLT D ++ YDLKQ L+ + PVP ELA H
Sbjct: 749 FDLPSKIQNYTHRIGRTGRAGKDGVAISFLTDDDEEIMYDLKQYLVSTEMPVPSELANHP 808
Query: 649 ASKFKPGT 656
++K PG
Sbjct: 809 SAKAAPGA 816
>gi|297851254|ref|XP_002893508.1| hypothetical protein ARALYDRAFT_473025 [Arabidopsis lyrata subsp.
lyrata]
gi|297339350|gb|EFH69767.1| hypothetical protein ARALYDRAFT_473025 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/384 (76%), Positives = 332/384 (86%), Gaps = 5/384 (1%)
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
MAAIPLGL+QRDVIGI++TGSGKTAAFVLPML YISRLPP+ EEN+ EGPYA+VMAPTRE
Sbjct: 1 MAAIPLGLEQRDVIGISQTGSGKTAAFVLPMLAYISRLPPLREENQTEGPYALVMAPTRE 60
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAV 398
LA QIEEETVKFA YLG K +SI GG+SIE+Q ++ QGCE+VIATPGRLIDCLERRY V
Sbjct: 61 LAHQIEEETVKFARYLGFKAISITGGESIEKQALKLSQGCEIVIATPGRLIDCLERRYVV 120
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
LNQCNY+VLDEADRMIDMGFEPQV VLDAMPSSNLKP+ EDEEL+EK+IYRTTYMFSAT
Sbjct: 121 LNQCNYLVLDEADRMIDMGFEPQVAEVLDAMPSSNLKPKKEDEELEEKKIYRTTYMFSAT 180
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTA 517
M +VERLARKYLRNPVVVTI G+ T+ I+Q VVM KES KFSRL++L+D+L DKTA
Sbjct: 181 MLHSVERLARKYLRNPVVVTI---GETTKFITQKVVMTKESNKFSRLKKLIDDLSDDKTA 237
Query: 518 IVFVNTKKNADMVAKNLDKLG-YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFVNT+ D + KNL+KL RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GR
Sbjct: 238 IVFVNTRNKVDYIVKNLEKLARCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGR 297
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+DI D+A VINYDMP +++YTHRIGRTGRAGKTG+ATTFLT D D+FY LKQ LI+
Sbjct: 298 GLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGIATTFLTLEDKDLFYGLKQKLIEC 357
Query: 637 NSPVPPELAKHEASKFKPGTIPDR 660
NS VPPELA+HEASKFKPGT+PDR
Sbjct: 358 NSLVPPELARHEASKFKPGTVPDR 381
>gi|156057349|ref|XP_001594598.1| hypothetical protein SS1G_04405 [Sclerotinia sclerotiorum 1980]
gi|160419160|sp|A7EGG4.1|PRP28_SCLS1 RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|154702191|gb|EDO01930.1| hypothetical protein SS1G_04405 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 816
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/708 (45%), Positives = 436/708 (61%), Gaps = 84/708 (11%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ---LLSQPQTHGRNSSDSRDRERERH 70
KP FL+KA RE+LALE+R +++ +Q+R++E +Q + +G +++ RD H
Sbjct: 101 KPKFLSKAAREKLALEKRAKEVEEQRRKRESEQDNRIPVGTVNGNGYGAANGRDGYERSH 160
Query: 71 RREREEE----------------------------------------AKARERARL--EK 88
+++ A +A + EK
Sbjct: 161 QQDNARRDSSFVPTGPRAMRNGQQNRPSSDKPNDMEPPPKSAKPATTAAGSSKASVAGEK 220
Query: 89 LAERERERELELIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+ + LI+ +Y+G++ KK+ + +EK +F+F+W EDTS D N +Y
Sbjct: 221 RPANAEDLQAALIRTRYMGAETNQSTFSAKKKRRRTTEK-KFNFEWNAEEDTSPDYNPIY 279
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE-- 200
QN EA L +GRG AG E L + + +EE+ EA + + +E
Sbjct: 280 QNRAEAGL-YGRGRLAGFAEDEAATL------------KYAKALEERDIEAGSARAREIV 326
Query: 201 --EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
E D +D+HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+W+E KL
Sbjct: 327 EMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRSWSESKL 386
Query: 259 TPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP 318
LL + +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP
Sbjct: 387 PKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPP 446
Query: 319 ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 378
++E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+EEQ + +R G
Sbjct: 447 LNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGA 506
Query: 379 EVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
E++IATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP+
Sbjct: 507 EIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDT 566
Query: 439 EDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
+D E L K YR T M++ATMPPAVE++A+KYLR P +VTIG G+A E +
Sbjct: 567 DDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVE 626
Query: 491 QHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
Q V + +K R +RL + L IVFVN K+N D VA+++ +G+ TLHG
Sbjct: 627 QRVEFVAGEDK--RKKRLNEILASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHG 684
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
K+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTG
Sbjct: 685 SKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTG 744
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
RAGK+GVA TFL D D YDLKQML++S+ S VP EL KHEA++ K
Sbjct: 745 RAGKSGVAITFLGNEDADTMYDLKQMLMKSSISRVPEELRKHEAAQQK 792
>gi|301112795|ref|XP_002998168.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262112462|gb|EEY70514.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 823
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 339/718 (47%), Positives = 452/718 (62%), Gaps = 78/718 (10%)
Query: 14 KPLFLTKAQREQLALER----RQEQIAQQKRRQEQQQQLLSQPQTH------GRNSSDSR 63
KP F +KAQR++ ALER RQE Q+K +E ++Q L + ++ R++ D R
Sbjct: 89 KPTFRSKAQRQRDALERLEKKRQEMDKQRKETEEARRQFLQRQRSERERDRSARSNGDRR 148
Query: 64 DRERERHRREREEEAKARERARLE-KLAERERERELELIKEQYLGSKKPKKRVIKPSEKF 122
+R R+R E + + + L + + L+ +K+QYLG KK+VIK SEKF
Sbjct: 149 RDDRTGSSRDRRGETTSSSKNEDKPALLDPSEAKALQALKDQYLGKTVKKKKVIKASEKF 208
Query: 123 R--FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK-------LAAKNE 173
F FDWE +EDTS D+N LY + + LL+GRG+RAG+D REQ+K L+ K +
Sbjct: 209 SKVFQFDWEASEDTSADLNPLYAHRMDVNLLYGRGYRAGVDMREQRKQNSFLEELSHKRQ 268
Query: 174 KEMR-----------EEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKL 222
KE + E+I ++ E+ + ++ ++ + HWSEK L
Sbjct: 269 KEQQQADATDGSLTSEQIAARQQERERALRNMQARERDRIQEMASREAKTMGTHWSEKSL 328
Query: 223 EEMTERDWRIFREDFNISYKGSKIPRPMRNWAE-GKLTPE-LLRAVERVGYKNPSPIQMA 280
+EM ERDWRIFREDF+I+ KG + P P+R W+E GK+ P+ + +A++ +G++ PSPIQM
Sbjct: 329 DEMKERDWRIFREDFDITLKGGRAPHPLRKWSEAGKMLPDAVYKAIKDLGFERPSPIQMQ 388
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAPTREL 339
AIP+GLQ+RD+IGIAETGSGKTAAFV+P++ YI LP E GP A+VMAPTREL
Sbjct: 389 AIPIGLQKRDIIGIAETGSGKTAAFVIPIIAYIYSLPATMVARTGEQGPLALVMAPTREL 448
Query: 340 AQQIEEETVKFAHYLG---------IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
A QIE+E +K + IK +S+VGGQSIE+QGFR+R+G E++I TPGRL+D
Sbjct: 449 ALQIEQEAIKLCKHTSVGLPEKMNPIKTLSVVGGQSIEDQGFRLREGVEIIIGTPGRLMD 508
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE--------- 441
CLE Y VLNQCNYVVLDEADRMIDMGFEPQVV VL+ M S LK ENE+E
Sbjct: 509 CLESHYLVLNQCNYVVLDEADRMIDMGFEPQVVAVLENM-GSLLKSENEEEMEQQLTLAN 567
Query: 442 --ELDE-KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGT--AGKATELISQHVVMM 496
+L E + R T MFSATMP VERLA+ +LR+P +V IG +GK + I Q V+ M
Sbjct: 568 RAQLGEFQHRLRVTTMFSATMPVEVERLAKTFLRHPSIVKIGDEDSGK-NKRIEQRVMFM 626
Query: 497 KESEKFSRLQRLLDEL------------------GDKTAIVFVNTKKNADMVAKNLDKLG 538
+K S+L +L ++ G K IVFVN KK D VAK + G
Sbjct: 627 NPGKKRSKLVEVLRDILSAQNVPVPRSRKEKVVDGAKI-IVFVNIKKECDSVAKFISSEG 685
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
+R T LHGGK+Q+QRE SL+ FR ++LVATDVAGRG+DIPDV HV+N+D+P I+ Y
Sbjct: 686 FRCTILHGGKTQDQREESLKMFREGYCDMLVATDVAGRGLDIPDVTHVVNFDLPSKIQNY 745
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGT 656
+HRIGRTGRAGK GVA + LT D ++ YDLKQ L+ + PVP ELA H ++K PG
Sbjct: 746 SHRIGRTGRAGKDGVAISLLTDDDEEIMYDLKQYLVSTEMPVPSELANHPSAKAAPGA 803
>gi|258577621|ref|XP_002542992.1| hypothetical protein UREG_02508 [Uncinocarpus reesii 1704]
gi|237903258|gb|EEP77659.1| hypothetical protein UREG_02508 [Uncinocarpus reesii 1704]
Length = 783
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/685 (47%), Positives = 435/685 (63%), Gaps = 68/685 (9%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERE----- 68
KP FL+KAQRE+LALE+R + ++R++ T+G +SDS R+
Sbjct: 99 KPKFLSKAQREKLALEKRAREFENERRKR--------TASTNGSITSDSNGGSRDFTGKL 150
Query: 69 --------RHRREREEEAKARERARLEKLAERERERELE-----LIKEQYLGSKK----- 110
R + + +A++ + + E+ E LIK++Y+G+ +
Sbjct: 151 DLSDAAAMRSSQSKNGDARSGGKNTSDSTPVGEKRTAPEDAQALLIKQRYMGADQTSNFS 210
Query: 111 PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAA 170
KK+ + +E+ +F+F+W EDTS D N LYQN E FGRG AG
Sbjct: 211 AKKKRRRTTER-KFNFEWNVEEDTSPDYNPLYQNRSEMNF-FGRGRLAGF---------- 258
Query: 171 KNEKEMREEIRKK--EGVEEKPEEAAALKLKEEAADLYDTFDM----RVDRHWSEKKLEE 224
+M + KK +E++ EA + + +E + +D HWS+KKLE+
Sbjct: 259 --ADDMVDNAAKKYARALEDRDLEAGSARAREILEMERRRREEGGRHALDLHWSQKKLEQ 316
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+PSPIQ AAIP+
Sbjct: 317 MRERDWRIFKEDFNISTKGGSIPNPMRSWGESTLPARLLEIIDKVGYKDPSPIQRAAIPI 376
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVMAPTRELAQQ 342
LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA+++APTRELAQQ
Sbjct: 377 ALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQ 436
Query: 343 IEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQC 402
IE E KF LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+ERR VL+QC
Sbjct: 437 IENEARKFCSPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVLSQC 496
Query: 403 NYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYM 454
YV++DEADRMID+GFE V +LDA+P +N KP+ ++ E + K YR T M
Sbjct: 497 CYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTDEAEDPRAMSQHVGGKDRYRQTMM 556
Query: 455 FSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGD 514
++ATMP AVER+ARKYLR P ++TIG G+A + + Q V + +K R +RL D L
Sbjct: 557 YTATMPSAVERIARKYLRRPAIITIGNVGEAVDTVEQRVEFIAGEDK--RKKRLADILAS 614
Query: 515 K----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVA 570
IVFVN K+N D VA+++ ++G+ TLHG K+QEQRE +L R +VLVA
Sbjct: 615 GEYRPPIIVFVNIKRNCDAVARDIKQMGFSAVTLHGSKTQEQREAALASVRNGNTDVLVA 674
Query: 571 TDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLK 630
TD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL D+DV YDLK
Sbjct: 675 TDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDSDVMYDLK 734
Query: 631 QMLIQSN-SPVPPELAKHEASKFKP 654
QML++S+ S VP EL KHEA++ KP
Sbjct: 735 QMLMKSSISRVPEELRKHEAAQSKP 759
>gi|320164395|gb|EFW41294.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 875
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 330/723 (45%), Positives = 446/723 (61%), Gaps = 89/723 (12%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQ---------------------- 51
KP+FLTK QR +LA++ Q+++ Q+ R + +L+
Sbjct: 167 KPVFLTKEQRAELAIKCSQDEVNAQRARLQGGIAILASGASSSDHSMSTSSGTSSSSSSN 226
Query: 52 ------PQTHGRNSSDSRDRER----ERHRREREEEAKARERARLEKLA------ERERE 95
+ R SS RDR+R R +R RE
Sbjct: 227 AAGSSNGSSFNRGSSSDRDRDRTDPYSRFSSDRTSSNDRDRPRDSRDRFDRGGRDSREPR 286
Query: 96 RE---------LELIKEQYLGS---KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ 143
R L+ KE+YL + +KR+ + +F F+W+N +DTS D N LY+
Sbjct: 287 RSEAEIAAEEELKANKERYLSGQAVQTNRKRLDR-----KFLFEWDNQDDTSMDFNPLYK 341
Query: 144 NPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAA 203
H+AQ LFGRG AG+D Q K + + R+ + E+ EE +L +E+
Sbjct: 342 ERHQAQ-LFGRGHIAGIDPTSQLKASFYRDY---LSARQTQEENERVEERRREELLKESR 397
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
+D +RHW++K L++MTERDWRI RED+NI KG IPRPMRNW E L E+L
Sbjct: 398 VKFD------ERHWADKPLDQMTERDWRILREDYNIGAKGGHIPRPMRNWNEIGLPTEIL 451
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP-PISEE 322
+ +GY PSPIQ AIP+GLQ RDVIGIA+TGSGKTAAFV+P+L ++SR+P + E+
Sbjct: 452 DIITDLGYTEPSPIQRQAIPIGLQNRDVIGIAQTGSGKTAAFVIPLLVWVSRIPRRLREQ 511
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
GP+A++MAPTRELAQQIE ET+KFA+ +G++ V ++GG S EEQ F++R GC+++I
Sbjct: 512 TVDHGPFAIIMAPTRELAQQIEVETLKFANPMGLRTVCVIGGLSREEQAFQLRLGCDIII 571
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE-DE 441
ATPGRLID LE RY VLN+C Y+VLDEADRMIDMGFEP + VLD P SN++P +E DE
Sbjct: 572 ATPGRLIDILENRYLVLNRCTYIVLDEADRMIDMGFEPDLKKVLDFFPVSNMRPTDEPDE 631
Query: 442 ELDE-----------------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
LD K YR T MF+ATMPP V+RLA++Y+R P VVTIG+AG+
Sbjct: 632 ALDAVTYHTQKFENMDIDSIVKTRYRQTVMFTATMPPLVQRLAQQYMRKPAVVTIGSAGQ 691
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
+ ++Q V +M E+ K RL +L E + +FVN KK D++AK+L+KLGYRV +L
Sbjct: 692 TVDQVTQVVEIMTEANKRKRLLEILGEEHEPPIFIFVNQKKGCDLLAKSLEKLGYRVASL 751
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK+QEQR+ +L+GF++ ++LVATDVAGRGIDI DV+ VINYDM ++ YTHRIGR
Sbjct: 752 HGGKTQEQRQAALDGFKSGDLDLLVATDVAGRGIDIKDVSLVINYDMSKTVQEYTHRIGR 811
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---PPELAKHEASKFKPGTIPDRP 661
TGRAGK G+A TFLT DT V+Y+LKQ+LI NSPV PP+L H ++ PG + +
Sbjct: 812 TGRAGKKGLAITFLTNEDTGVYYELKQILI--NSPVSKCPPDLMNHPEAQNPPGQMSSKD 869
Query: 662 PRR 664
R+
Sbjct: 870 LRK 872
>gi|240282011|gb|EER45514.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
capsulatus H143]
Length = 790
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 336/688 (48%), Positives = 436/688 (63%), Gaps = 51/688 (7%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQ-PQTHGRNSSD 61
R DE S KP FL +A+RE+LALE+R +++ +KR Q + + +T+G NSS
Sbjct: 92 READEAAS---KPKFLPRAEREKLALEKRTKEVKNKKRLQANGARPSPRNSETNGYNSSA 148
Query: 62 SRDRERERHRRE---------REEE---AKARERARLEKLAE-RERERELELIKEQYLGS 108
SR + R R E A A R + + R + LI+++Y+GS
Sbjct: 149 SRSDGIDGSSRPLIPTGPRGMRHGEIPTAPAAMRTKQNDMPPPLSRRAQAALIRQRYMGS 208
Query: 109 KK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRR 163
+ KK+ + +E+ +F+F+W EDTS D N LYQN A FGRG AG
Sbjct: 209 DQTSNFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSIANF-FGRGRLAGFSD- 265
Query: 164 EQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADLYDTFDMRVDRHWSEKK 221
E +N E+ R E + E + + KEE +D HWSEKK
Sbjct: 266 EFADTVTRNYARALED-RDPEAGRARAREILEMERRRKEEGGR------HALDAHWSEKK 318
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
LE M ERDWRIF+EDFNIS KG IP PMR+WAE L LL VE+VGY +PSPIQ AA
Sbjct: 319 LEHMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLPKRLLSIVEQVGYTDPSPIQRAA 378
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVMAPTREL 339
IP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +GPYA+++APTREL
Sbjct: 379 IPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRRNDGPYAIILAPTREL 438
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQIE E KF+ LG VVSIVGG S+EEQ + +R G E++IATPGRL+DC+ERR VL
Sbjct: 439 AQQIEIEAKKFSVPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRMIVL 498
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRT 451
+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ED E + K YR
Sbjct: 499 SQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNQKPDTEDAENAQAMSQHIGGKDRYRQ 558
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R +RL +
Sbjct: 559 TMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--RKKRLAEI 616
Query: 512 LGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L + IVFVN K+N D VA+++ +GY TLHG K+QEQRE +L R +V
Sbjct: 617 LSSREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLHGSKTQEQREAALASVRNGNTDV 676
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
LVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G+A TFL D+DV Y
Sbjct: 677 LVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGIAITFLGNEDSDVLY 736
Query: 628 DLKQMLIQSN-SPVPPELAKHEASKFKP 654
DLKQML++S+ S VP EL KHEA++ KP
Sbjct: 737 DLKQMLMKSSISRVPEELRKHEAAQSKP 764
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 307/601 (51%), Positives = 415/601 (69%), Gaps = 34/601 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 E 596
E
Sbjct: 746 E 746
>gi|299470469|emb|CBN78461.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1012
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 341/691 (49%), Positives = 437/691 (63%), Gaps = 65/691 (9%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
K F TK QREQ AL+R +EQ ++ RR+EQ+ R +S ER+R E
Sbjct: 333 KLAFKTKKQREQEALQRLEEQ--RKSRRREQEAAAAE------RGTS-----ERQRQLEE 379
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENT 131
KARE R E A+RE+E+E EL++EQYLG KK KK+++KPSEKF F FDW+ +
Sbjct: 380 DRRRQKARETEREEARAQREKEKERELLREQYLGKKKVKKKIVKPSEKFSKIFQFDWDAS 439
Query: 132 EDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK----LAAKNEKEMREEIRKKEGV- 186
EDTSRD N LY + FGRG+ AG+D REQ+K L A EK +EE R+ E
Sbjct: 440 EDTSRDANPLYNERAQLNASFGRGYLAGIDMREQRKESAFLTALMEKR-QEEQRRAEAAD 498
Query: 187 ---------------EEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWR 231
E++ E A L E AD + HWSEK L EM ERDWR
Sbjct: 499 HSLTAQDKADRERAREQQMAEVEAFSLAE--ADGMGDDPVLKGAHWSEKPLAEMAERDWR 556
Query: 232 IFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
IFREDF+I KG K P P+R W EG L ++ A+ +GY+ PSPIQ AIP+G+++RD+
Sbjct: 557 IFREDFDIRVKGGKAPLPLRFWEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDI 616
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKF 350
IGIAETGSGKTAAF +PM+ YI L + A+ GP A++MAPTRELA QIEEE KF
Sbjct: 617 IGIAETGSGKTAAFGIPMIAYILSLEAGMRDRVADQGPLALIMAPTRELAIQIEEECKKF 676
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
+ G+ V +VGGQ IE Q F +R+G E++I TPGRL DC+E+ Y VLNQCNYVVLDEA
Sbjct: 677 CKFAGLNTVCVVGGQDIEAQAFTLRKGVEIIIGTPGRLNDCVEKHYLVLNQCNYVVLDEA 736
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR------------IYRTTYMFSAT 458
DRMIDMGFE QV+ VL+AM LK +D EL K+ + R T MFSAT
Sbjct: 737 DRMIDMGFEDQVLAVLEAM-GGTLKA--DDAELAYKQEKKAKQARSAADLVRVTAMFSAT 793
Query: 459 MPPAVERLARKYLRNPVVVTIG--TAGKATELISQHVVMMKESEKFSRLQRLL-DELGDK 515
MP AVE++A+KYLR+P +V IG GK I Q V+ M E++K +++ LL +
Sbjct: 794 MPAAVEKMAKKYLRHPAIVQIGDEDTGK-NRRIEQRVLWMTEAQKKTKVTELLRGHDKED 852
Query: 516 TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
+VF+NTKK+ADM+ + L++ G+ LHGGK+Q+QRE +LE FR Y VLVATDVA
Sbjct: 853 RVLVFINTKKSADMLGRQLEQAGFPTGVLHGGKTQDQREENLESFRDGDYTVLVATDVAS 912
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+DIPDV VINY++P IE Y HRIGRTGRAGK GVAT+FLT HD ++ + L++ L
Sbjct: 913 RGLDIPDV-KVINYELPNKIETYCHRIGRTGRAGKDGVATSFLTEHDEEIMFGLREYLQS 971
Query: 636 SNSPVPPELAKHEASKFKPGTIPDRPPRRND 666
+ S VP +L KH A++ G RR+D
Sbjct: 972 TESHVPQQLMKHNAAQAAVGA------RRDD 996
>gi|378725910|gb|EHY52369.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Exophiala
dermatitidis NIH/UT8656]
Length = 835
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 334/698 (47%), Positives = 443/698 (63%), Gaps = 70/698 (10%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQL----LSQPQTHGRNSSDSRDRERER 69
KP FLT+A+RE+LALE+R +++ + Q L + P ++ S+S R R
Sbjct: 121 KPKFLTRAERERLALEKRAKEVEAAGAAKSQNGILREDSVGPPTQPEQSKSNSSVPNRPR 180
Query: 70 HRRERE-----EEAKARERARLEKLA-------------------ERERER------ELE 99
+R + ++RE R LA +R+ E ELE
Sbjct: 181 AQRNGDIPTGPAAMRSREPNRGVDLAPPPPPKPIAFGGSDSKSAQKRQAEEDPVEKAELE 240
Query: 100 LIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFG 153
LI+++Y+G+ +K+ + +EK +F+F+W EDT+ D N +Y N FG
Sbjct: 241 LIRQRYMGANMNVSTFSAQKKRRRTTEK-KFNFEWNTEEDTTPDYNPIY-NERAQPTFFG 298
Query: 154 RGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADLYDTFDM 211
RG G D +Q AA + + R E + +E + K KEE + M
Sbjct: 299 RGRLGGFD--DQAAEAAARKYAEALQSRDGEAGAARAQEILEMERKRKEE------SNRM 350
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
+D+HWSEK+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL+ VE+VGY
Sbjct: 351 AIDKHWSEKRLDQMRERDWRIFKEDFNISTKGGGIPNPMRSWQESGLPRRLLQIVEQVGY 410
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN--EAEGPY 329
K+PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP + E+ GPY
Sbjct: 411 KDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISELPRLDEDEMRRNNGPY 470
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A+++APTRELAQQIE E KFA LG VVSIVGG SIEEQ + +R G E++IATPGRL+
Sbjct: 471 AIILAPTRELAQQIEIEAKKFATPLGFTVVSIVGGHSIEEQAYNLRNGAEIIIATPGRLV 530
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI- 448
DC+ERR VL QC YV++DEADRMIDMGFE V +LDA+P SN KP++E E D + +
Sbjct: 531 DCIERRIIVLEQCCYVIMDEADRMIDMGFEEPVNKILDALPVSNEKPDSEAAE-DSRAMS 589
Query: 449 ---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKE 498
YR T M++ATMPPAVER+ARKYLR P +VTIG G+A + + Q V + E
Sbjct: 590 SHIGGRDIRYRQTMMYTATMPPAVERIARKYLRRPAIVTIGNVGEAVDTVEQRVEFVAGE 649
Query: 499 SEKFSRLQRLLDELGD--KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
++ RLQ++L G+ IVFVN K+N D VA+++ +G+ TLHG K+QEQRE +
Sbjct: 650 DKRKKRLQQILAS-GEFRPPIIVFVNIKRNCDAVARDIKSMGFSSVTLHGSKTQEQREAA 708
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L+ R + +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA T
Sbjct: 709 LQSVRDGKTDVLVATDLAGRGIDVPDVSLVVNFNMANNIESYTHRIGRTGRAGKSGVAIT 768
Query: 617 FLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
FL D DV YDLKQML++S+ S VP EL KHEA++ K
Sbjct: 769 FLGNEDADVLYDLKQMLMKSSISRVPEELRKHEAAQQK 806
>gi|325088148|gb|EGC41458.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
capsulatus H88]
Length = 805
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 335/703 (47%), Positives = 438/703 (62%), Gaps = 66/703 (9%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQ-PQTHGRNSSD 61
R DE S KP FL +A+RE+LALE+R +++ +KR Q + + +T+G NSS
Sbjct: 92 READEAAS---KPKFLPRAEREKLALEKRTKEVKNKKRLQANGARPSPRNSETNGYNSSA 148
Query: 62 SRDRERE--------------RHRREREEEAKARER-----------ARLEKLAERE--- 93
SR + RH A R + + ++ E+
Sbjct: 149 SRSDGIDGSSRPLIPTGPRGMRHGEIPTAPAAMRTKQNDMPPPPPPGPKTDQKGEKRPSP 208
Query: 94 RERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA 148
E + LI+++Y+GS + KK+ + +E+ +F+F+W EDTS D N LYQN A
Sbjct: 209 EEAQAALIRQRYMGSDQTSNFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSIA 267
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADLY 206
FGRG AG E +N E+ R E + E + + KEE
Sbjct: 268 NF-FGRGRLAGFSD-EFADTVTRNYARALED-RDPEAGRARAREILEMERRRKEEGGR-- 322
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+D HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+WAE L LL V
Sbjct: 323 ----HALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLPKRLLSIV 378
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENE 324
E+VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E
Sbjct: 379 EQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRR 438
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G E++IAT
Sbjct: 439 NDGPYAIILAPTRELAQQIEIEAKKFSVPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIAT 498
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 442
PGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ED E
Sbjct: 499 PGRLVDCIERRMIVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNQKPDTEDAENA 558
Query: 443 ------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
+ K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V +
Sbjct: 559 QAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFI 618
Query: 497 KESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+K R +RL + L + IVFVN K+N D VA+++ +GY TLHG K+QEQ
Sbjct: 619 SGEDK--RKKRLAEILSSREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLHGSKTQEQ 676
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G
Sbjct: 677 REAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 736
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
+A TFL D+DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 737 IAITFLGNEDSDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 779
>gi|347829757|emb|CCD45454.1| similar to pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Botryotinia fuckeliana]
Length = 817
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 326/708 (46%), Positives = 435/708 (61%), Gaps = 83/708 (11%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQE-QQQQLLSQPQTHGR-NSSDSRDRERERHR 71
KP FL+KA RE+LALE+R +++ +QKR++E +Q +S +G N S R+ +
Sbjct: 101 KPKFLSKAAREKLALEKRAKEVEEQKRKREAEQDNRISIGSVNGNGNGYGSAANGRDGYE 160
Query: 72 REREEEAKARERARL--------------------------------------------E 87
R ++E RE + + E
Sbjct: 161 RSYQQENGRRESSFVPTGPRAMRNSQQSRSSSDKPNDMEPPPKPAKSAAAGTGKASVAGE 220
Query: 88 KLAERERERELELIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNAL 141
K + + LIK +Y+G++ KK+ + +EK +F+F+W EDTS D N +
Sbjct: 221 KRPANAEDLQAALIKTRYMGAETNQSTFSAKKKRRRTTEK-KFNFEWNAEEDTSPDYNPI 279
Query: 142 YQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE- 200
YQN EA + R + A++E ++ + +EE+ EA + +E
Sbjct: 280 YQNRAEAG----------LYGRGRLGGFAEDEGAT---LKYAKALEERDAEAGGARAREI 326
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E D +D+HWSEKKLE M ERDWRIF+EDFNIS KG IP PMRNW+E K
Sbjct: 327 VEMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNWSESK 386
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL + +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 387 LPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELP 446
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P++E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+EEQ + +R G
Sbjct: 447 PLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNG 506
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E++IATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP+
Sbjct: 507 AEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPD 566
Query: 438 NEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
+D E L K YR T M++ATMPPAVE++A+KYLR P +VTIG G+A E +
Sbjct: 567 TDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETV 626
Query: 490 SQHV-VMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
Q V + E ++ RL +L E IVFVN K+N D VA+++ +G+ TLHG
Sbjct: 627 EQRVEFVAGEDKRKKRLNEILASGEFAPPI-IVFVNIKRNCDAVARDIKHMGFTSVTLHG 685
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
K+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTG
Sbjct: 686 SKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTG 745
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
RAGK+GVA TFL D+D YDLKQML +S+ S VP EL KHEA++ K
Sbjct: 746 RAGKSGVAITFLGNEDSDTMYDLKQMLTKSSISRVPEELRKHEAAQQK 793
>gi|161784285|sp|Q5BCU6.2|PRP28_EMENI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|259486970|tpe|CBF85264.1| TPA: Pre-mRNA-splicing ATP-dependent RNA helicase prp28 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BCU6]
[Aspergillus nidulans FGSC A4]
Length = 782
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 324/682 (47%), Positives = 429/682 (62%), Gaps = 49/682 (7%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQ------------EQQQQLLSQPQTHGRN--- 58
+P F++KA+RE+LALE+R +++ Q+RR + + P R+
Sbjct: 89 RPKFMSKAERERLALEKRAKEVDAQRRRTNGTPNGVDGMDLDTPSRGFRTPNGDSRSIPT 148
Query: 59 ------SSDSRDRERERHRREREEEAKARERARLEKL--AERERERELELIKEQYLGSKK 110
+ D R R + + +++K E E + LIK++Y+G+ +
Sbjct: 149 GPRAMRNGDGPTPTGPAAMRSRNDSGTTKSDKKVDKRFNEEDEAAAQAALIKQRYMGADQ 208
Query: 111 PK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQK 166
K+ K + +F+F+W EDTS D N LYQ+ HEA FGRG AG
Sbjct: 209 TSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANF-FGRGRLAGFGDDVAD 267
Query: 167 KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMT 226
+A K K + + R+ + A L+ E ++ ++D+HWSEKKLE M
Sbjct: 268 SVAKKYAKALEDRDREAGSIR------AREILEMERRRREESTRNQLDKHWSEKKLEHMR 321
Query: 227 ERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGL 286
ERDWRIF+EDFNI+ KG +P PMR+W E L LL V+RVGYK P+PIQ AAIP+ +
Sbjct: 322 ERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAM 381
Query: 287 QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVMAPTRELAQQIE 344
Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E + +GPYA+V+APTRELAQQIE
Sbjct: 382 QSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIE 441
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+ERR VL+QC Y
Sbjct: 442 IEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCY 501
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFS 456
V++DEADRMID+GFE V +LDA+P +N KP+ E+ E L K YR T M++
Sbjct: 502 VIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYRQTMMYT 561
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGD- 514
ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ E ++ RL +L GD
Sbjct: 562 ATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEILSS-GDF 620
Query: 515 -KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L R +VLVATD+
Sbjct: 621 RPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDL 680
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
AGRGID+PDV+ VIN++M +IE YTHRIGRTGRAGK+GVA TFL D DV YDLKQML
Sbjct: 681 AGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQML 740
Query: 634 IQSN-SPVPPELAKHEASKFKP 654
I+S S VP EL KHEA++ KP
Sbjct: 741 IKSPISRVPEELRKHEAAQSKP 762
>gi|225559088|gb|EEH07371.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
capsulatus G186AR]
Length = 805
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/703 (47%), Positives = 438/703 (62%), Gaps = 66/703 (9%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQ-PQTHGRNSSD 61
R DE S KP FL +A+RE+LALE+R +++ +KR Q + + +T+G NSS
Sbjct: 92 READEAAS---KPKFLPRAEREKLALEKRAKEVENKKRLQANGARPSPRNSETNGYNSSA 148
Query: 62 SRDRERE--------------RH-----------RREREEEAKARERARLEKLAERE--- 93
SR + RH ++ + + ++ E+
Sbjct: 149 SRSDGIDGSSRPLIPTGPRGMRHGEIPTAPAAMRTKQNDMPPPPPPGPKADQKGEKRPSP 208
Query: 94 RERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA 148
E + LI+++Y+GS + KK+ + +E+ +F+F+W EDTS D N LYQN A
Sbjct: 209 EEAQAALIRQRYMGSDQTSNFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSIA 267
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADLY 206
FGRG AG E +N E+ R E + E + + KEE
Sbjct: 268 NF-FGRGRLAGFSD-EFADAVTRNYARALED-RDPEAGRARAREILEMERRRKEEGGR-- 322
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+D HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+WAE L LL V
Sbjct: 323 ----HALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLPKRLLSIV 378
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENE 324
E+VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E
Sbjct: 379 EQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRR 438
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G E++IAT
Sbjct: 439 NDGPYAIILAPTRELAQQIEIEAKKFSVPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIAT 498
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 442
PGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ED E
Sbjct: 499 PGRLVDCIERRMIVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNQKPDTEDAENA 558
Query: 443 ------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
+ K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V +
Sbjct: 559 QAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFI 618
Query: 497 KESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+K R +RL + L + IVFVN K+N D VA+++ +GY TLHG K+QEQ
Sbjct: 619 SGEDK--RKKRLAEILSSREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLHGSKTQEQ 676
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G
Sbjct: 677 REAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 736
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
+A TFL D+DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 737 IAITFLGNEDSDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 779
>gi|169773397|ref|XP_001821167.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
oryzae RIB40]
gi|91207407|sp|Q2UH00.1|PRP28_ASPOR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|83769028|dbj|BAE59165.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866029|gb|EIT75307.1| U5 snRNP-like RNA helicase subunit [Aspergillus oryzae 3.042]
Length = 803
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/694 (46%), Positives = 435/694 (62%), Gaps = 62/694 (8%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKR--------RQEQQQQLLSQPQTH--GRN----- 58
+P FL++A+RE++ALE+R +++ ++R R Q +S H GR
Sbjct: 99 RPKFLSRAERERIALEKRAKEVEAERRLKASNGVDRSATQSPSVSSEVNHSDGRTIPTGP 158
Query: 59 ----SSDSRD-----RERERHRREREEEAKARERARLEKLAERERER----------ELE 99
SSD+ R H + R+ ++ LA + ++ ++
Sbjct: 159 RAMRSSDTPTAPAAMRNSHSHNKNRDLSPPPPPKSMSFGLASSKGDKRPVDDDEVAAQVA 218
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
L+K++Y+G+ + K+ K + +F+F+W EDTS D N LYQ+ HEA FGRG
Sbjct: 219 LVKQRYMGADQTSTFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANF-FGRG 277
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AG +A K + + + + G+ A L+ E ++ ++D+
Sbjct: 278 RLAGFGDDVADNVAKKYARALEDRDHEAGGIR------AREILEMERRRREESTRNQLDK 331
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L L+ V +VGYK P+
Sbjct: 332 HWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESGLPKRLMELVNKVGYKEPT 391
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVM 333
PIQ AAIP+ +Q RD+IG+A TGSGKTA+F+LP+L YI+ LP I E + +GPYA+V+
Sbjct: 392 PIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVL 451
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+E
Sbjct: 452 APTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIE 511
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDE 445
RR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++E+ E +
Sbjct: 512 RRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAENSMAMSQHIGT 571
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
K YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V + +K R
Sbjct: 572 KDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIAGEDK--RK 629
Query: 506 QRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
+RL D L IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L R
Sbjct: 630 KRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVR 689
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+ +VLVATD+AGRGID+PDV+ VIN++M IE YTHRIGRTGRAGK+GVA TFL
Sbjct: 690 NGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNE 749
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
DTDV YDLKQM+++S+ S +P EL KHEA++ KP
Sbjct: 750 DTDVMYDLKQMIMKSSISRLPEELRKHEAAQSKP 783
>gi|409046062|gb|EKM55542.1| hypothetical protein PHACADRAFT_173680 [Phanerochaete carnosa
HHB-10118-sp]
Length = 668
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/654 (48%), Positives = 426/654 (65%), Gaps = 41/654 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FLTK QR +LALE+R+++I +QK R+E+ + + +T R + + R ++RER R
Sbjct: 27 KPKFLTKEQRAKLALEKREQEIREQKEREERAR---QERETLERGAEEHRQKQRERERAA 83
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
+ + + + L I+ +YLG K K+++ K +++ +F FDW+ +D
Sbjct: 84 PSTPLITDSAEYVPPMTDND----LSAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQDD 138
Query: 134 T--SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
T + A+ AQ++FGRG AGMD KN+ E +
Sbjct: 139 TFSAEAPAAVGSQRQGAQVMFGRGHIAGMDDGGTVVPGKKNDAE-----------GPGTQ 187
Query: 192 EAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
A AL+ + A D +RHWSEKKLEEM ERDWRIFREDF+I+ +G +IP P+R
Sbjct: 188 LADALERRRAAKTGID------ERHWSEKKLEEMRERDWRIFREDFSIASRGGQIPHPLR 241
Query: 252 NWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLT 311
+W E + LL +ER+GYK PSPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML+
Sbjct: 242 SWTESDIPQLLLDVIERIGYKEPSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLS 301
Query: 312 YISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQG 371
+IS+LP ++EN GPY++++APTRELAQQIE ET KFA LG VSIVGG+++EEQ
Sbjct: 302 FISKLPLFTDENRHLGPYSLILAPTRELAQQIESETKKFAGSLGFTCVSIVGGRAVEEQQ 361
Query: 372 FRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS 431
F +R G E++IATPGRL D +ER VL+QC Y+V+DEADRM+++GFE + +LD +PS
Sbjct: 362 FNLRAGAEIIIATPGRLKDVIERHVIVLSQCRYIVMDEADRMVNLGFEADLTFILDKLPS 421
Query: 432 SNLKPENEDEELD-------EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
++ E++ E++D +K R T +FSATMPP VERLA+KYL+ P ++TIG AG+
Sbjct: 422 DTMEGEDQGEQMDIDGETMIKKGRTRVTTLFSATMPPPVERLAKKYLKRPAIITIGEAGR 481
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYR 540
A + + Q V + EK + QR+L+ L I FVN KK ADMVAK+L + G+
Sbjct: 482 AVDTVEQRVEFVTGDEK--KKQRMLEILNSGQYASPIIAFVNQKKTADMVAKDLQRAGWN 539
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
TLH GK+QEQRE +L+ RT ++LVATD+AGRGID+ DV VINY M IE Y H
Sbjct: 540 AATLHSGKNQEQREAALQSLRTGEADILVATDLAGRGIDVTDVTLVINYQMSNTIEAYVH 599
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
RIGRTGRAGK G A TFLT D +V YDL+Q + +S S VPPELAKHEA++ K
Sbjct: 600 RIGRTGRAGKQGTAITFLTNDDEEVMYDLRQEISKSPVSKVPPELAKHEAAQHK 653
>gi|242801276|ref|XP_002483729.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218717074|gb|EED16495.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 803
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 322/705 (45%), Positives = 440/705 (62%), Gaps = 78/705 (11%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGR--NSSDSRD 64
E + KP FL+KA+RE+LALE+R +++ ++R + +Q P T+G N + D
Sbjct: 97 EADAAASKPKFLSKAERERLALEKRAKEVEAERRAKIEQN-----PSTNGSGVNGTTPDD 151
Query: 65 RERERHRREREEEAKARERARLEKLAER----------------------------ERER 96
R R R RA + E E
Sbjct: 152 RNGSRAEDSRSAPVPTGPRAMRNTQPNKDYDLAPPAPPKRIAFGKDDSKGGGKRVSEAEA 211
Query: 97 ELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
E EL++++Y+G+ + KK+ + +E+ +F+F+W EDTS+D N LYQN +A
Sbjct: 212 EAELVRQRYMGANQTSNFSAKKKRKRTTER-KFNFEWNAEEDTSKDYNPLYQNRAQANF- 269
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKK--EGVEEKPEEAAALKLKE----EAADL 205
FGRG AG ++M ++ ++ + +E++ EA +++ +E E
Sbjct: 270 FGRGRLAGFG------------EDMADDATRRYVQALEDRDREAGSVRAREILEMERRRK 317
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
++ +D+HWSEK+L++M ERDWRIF+EDFNIS KG +P PMR+W E L LL
Sbjct: 318 EESSRTAIDKHWSEKRLDQMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPRRLLDL 377
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--EN 323
V++VGY +P+PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+ YIS LP + E
Sbjct: 378 VKQVGYTDPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLFVYISELPRLDEFEWR 437
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+ +GPYA+++APTRELAQQIE E KF+ L VVSIVGG S+EEQ + +R G E++IA
Sbjct: 438 KNDGPYAIILAPTRELAQQIEIEAKKFSKPLNFNVVSIVGGHSLEEQAYSLRDGAEIIIA 497
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRL+DCLERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ E+ E
Sbjct: 498 TPGRLVDCLERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAED 557
Query: 444 DEK---------RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV 494
+ R YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V
Sbjct: 558 AQAMSQHVGGRDRRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNVGQAVDTVEQRVE 617
Query: 495 MMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQ 550
+ +K R +RL D L IVFVN K+N D VAK++ ++G+ TLHG K+Q
Sbjct: 618 FVAGEDK--RKKRLADILMSGQFQPPIIVFVNIKRNCDAVAKDIKQMGFSSVTLHGSKTQ 675
Query: 551 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 610
EQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK
Sbjct: 676 EQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGK 735
Query: 611 TGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 736 SGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 780
>gi|121707307|ref|XP_001271794.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359800|sp|A1CHL3.1|PRP28_ASPCL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119399942|gb|EAW10368.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 798
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 324/701 (46%), Positives = 436/701 (62%), Gaps = 66/701 (9%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQ-------QQLLSQPQTHGRNS 59
E + KP FL++A+RE+LALE+R +++ +R + ++ S P R +
Sbjct: 90 EADAAAAKPKFLSRAERERLALEKRAKEVDADRRLKTERTANGADSSSAQSTPVYPERPN 149
Query: 60 SDSR-DRERERHRREREEEAKARERARLEK---------------------------LAE 91
SD R R R E A++ A K E
Sbjct: 150 SDKRVIPTGPRAMRNTEAPARSGPAATRNKNYDMTPPAPPKPMSFSLTDSKGDSKRQAEE 209
Query: 92 RERERELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E ++ LIK++Y+G +K K+ K + +F+F+W EDTS D N LYQ+ HE
Sbjct: 210 DETVAQVALIKQRYMGEEKTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHE 269
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE----EAA 203
A +GRG AG LA K + +E++ +EA +++ +E E
Sbjct: 270 ANF-YGRGRLAGFGDDVADSLAKKYAR----------ALEDRDQEAGSIRAREMLEMEKR 318
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
++ ++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L LL
Sbjct: 319 RREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLL 378
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--E 321
V+RVGYK P+PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YI+ LP I E
Sbjct: 379 ELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFE 438
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+ +GPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++
Sbjct: 439 WRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAYSLRNGAEII 498
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
IATPGRL+DC+ERR VL+QC Y+++DEADRMID+GFE V +LDA+P +N KP++++
Sbjct: 499 IATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVTNEKPDSDEA 558
Query: 442 ELD---EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
E YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V ++
Sbjct: 559 ENSAAMRSHRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAG 618
Query: 499 SEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
+K R +RL D L IVFVN K+N D +A+ + +G+ TLHG K+Q+QRE
Sbjct: 619 EDK--RKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKHMGFSSVTLHGSKTQDQRE 676
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA
Sbjct: 677 AALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVA 736
Query: 615 TTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 737 ITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 777
>gi|66816623|ref|XP_642321.1| hypothetical protein DDB_G0277857 [Dictyostelium discoideum AX4]
gi|74997195|sp|Q54Y81.1|DDX23_DICDI RecName: Full=ATP-dependent RNA helicase ddx23; AltName:
Full=ATP-dependent RNA helicase helB2; AltName:
Full=DEAD box protein 23
gi|60470121|gb|EAL68101.1| hypothetical protein DDB_G0277857 [Dictyostelium discoideum AX4]
Length = 834
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 291/579 (50%), Positives = 387/579 (66%), Gaps = 17/579 (2%)
Query: 91 ERERER-ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ 149
+R+RE EL IK Y+G K+ + R EK +F F+W+++EDTS D N LY E Q
Sbjct: 255 KRDREDPELRDIKVDYMGIKRDENRKKIKGEKGKFVFEWDSSEDTSSDYNTLYTKKLEIQ 314
Query: 150 LLFGRG----FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
FG G + + ++ ++ ++L
Sbjct: 315 PQFGHGNFGGYEKNNNNNGNHYNGNIYNNNNNNNNNNNNNNNINNNNNGSMIGGKQISEL 374
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
DT HWS+K L+ MT+RDW IF+EDFNIS KG P P+R W E L E+L A
Sbjct: 375 PDT-------HWSKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEA 427
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ ++GY+ PSPIQM +IP+ L RD++GIAETGSGKT AFV+PML YIS+ P ++++ EA
Sbjct: 428 IRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEA 487
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
+GPYA+VMAPTREL QQIE+ET FA + G +VVS+VGGQSIE+Q +++ +GCE++IATP
Sbjct: 488 DGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATP 547
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDE 441
GRL DCLE+RY VLNQCNY+VLDEAD MID+GFEPQV VLDAMPSS LK E+ E +
Sbjct: 548 GRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQ 607
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESE 500
E D IYRTT +FSATMPP VE+L++KYLR P +TIG AGK + I Q V+ +K E++
Sbjct: 608 ESDRSHIYRTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSEND 667
Query: 501 KFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
K L +L+ + I+FVN KK+ D++A L++ T LH G+SQEQRE +LEGF
Sbjct: 668 KKEHLTQLIKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGF 727
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
+ ++Y VL+AT VA RGI + V HVIN+D+P NIE YTHRIGRTGRAG G+A++F+T
Sbjct: 728 KKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITD 787
Query: 621 HDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPD 659
D ++ YDLKQ+L +N+ VP EL KH +S+ K G+ D
Sbjct: 788 KDVEIMYDLKQILTSTNNIVPIELLKHPSSQQKHGSSKD 826
>gi|261204203|ref|XP_002629315.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis SLH14081]
gi|239587100|gb|EEQ69743.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis SLH14081]
gi|239614347|gb|EEQ91334.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis ER-3]
Length = 804
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 329/710 (46%), Positives = 436/710 (61%), Gaps = 79/710 (11%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLS--QPQTHGRNSS 60
R DE S KP FL++A+RE+LALE+R +++ Q+R + S P+ +G S
Sbjct: 91 READEAAS---KPKFLSRAEREKLALEKRAKEVENQRRLEANGTGPSSSRSPEMNGYPSP 147
Query: 61 DSRDRERE--------------RHRREREEEAKARER-----------ARLEKLAERE-- 93
SR + RH A R + + E+ E+
Sbjct: 148 PSRSNRIDGPSRASIPAGPRGLRHGEIPTAPAAMRTKQNDMPPPPLPGPKAEQKGEKRPS 207
Query: 94 -RERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E + LI+++Y+GS + KK+ + +E+ +F+F+W EDTS D N LYQN
Sbjct: 208 PEEAQAALIRQRYMGSGQTSNFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRST 266
Query: 148 AQLLFGRGFRAGMD--------RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLK 199
A +GRG AG R + L ++ + R R+ +E + +E +
Sbjct: 267 AN-FYGRGRLAGFSDEFADAVTRNYARALEDRDPEAGRVRAREILEMERRRKEEGGRHM- 324
Query: 200 EEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLT 259
+D HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+WAE L
Sbjct: 325 -------------LDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLP 371
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
LL +E+VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP +
Sbjct: 372 KRLLNIIEQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRL 431
Query: 320 S--EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
E +GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G
Sbjct: 432 DEFEWRRNDGPYAIILAPTRELAQQIELEAKKFSAPLGFNVVSIVGGHSLEEQAYSLRNG 491
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E++IATPGRL+DC+ERR V +QC YV++DEADRMID+GFE V +LDA+P +N KP+
Sbjct: 492 AEIIIATPGRLVDCIERRMIVFSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNQKPD 551
Query: 438 NEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
ED E + K YR T M++ATMPPAVER+ARKYLR P +VTIG G+A + +
Sbjct: 552 TEDAENPQAMSQHIGGKDRYRQTMMYTATMPPAVERIARKYLRRPAIVTIGNIGEAVDTV 611
Query: 490 SQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
Q V + +K R +RL + L + IVFVN K+N D VA+++ +GY TLH
Sbjct: 612 EQRVEFISGEDK--RKKRLAEILSSREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLH 669
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
G K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRT
Sbjct: 670 GSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIENYTHRIGRT 729
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GRAGK+G+A TFL D+DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 730 GRAGKSGIAITFLGNEDSDVLYDLKQMLMKSAISRVPEELRKHEAAQSKP 779
>gi|358366223|dbj|GAA82844.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 1430
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/706 (45%), Positives = 434/706 (61%), Gaps = 68/706 (9%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSS------ 60
E + KP FL+K +RE+LALE+R +++A +R + + + + TH + S
Sbjct: 714 EADAAAAKPKFLSKKEREKLALEKRAQEVAATRRLKSEASNGVDRSATHSPSISSEGPNG 773
Query: 61 DSRD---------------------RERERHRREREEEAKARERARLEKLA--------- 90
D+R R + H + + ++ L
Sbjct: 774 DARSIPTGPRAMRNSDSAPTAPAAMRHSQSHNKNYDLAPPPPPKSMSFGLTSGKGDSRFV 833
Query: 91 -ERERERELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP 145
E E + L+K++Y+G+ + K+ K + +F+F+W EDTS D N LYQ+
Sbjct: 834 DEDEAAAQAALVKQRYMGADQTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHR 893
Query: 146 HEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
HE FGRG AG + +A K + + + R+ + A L+ E
Sbjct: 894 HETNF-FGRGRLAGFGDDVAESVAHKYARALEDRDREAGSIR------AREILEMERRRR 946
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
++ ++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L L+
Sbjct: 947 EESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESNLPKRLMEL 1006
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--EN 323
+ RVGYK P+PIQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E
Sbjct: 1007 ISRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWR 1066
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+A+GPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++IA
Sbjct: 1067 KADGPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLRDGAEIIIA 1126
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE- 442
TPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++ED E
Sbjct: 1127 TPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDAEN 1186
Query: 443 ---------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV 493
D R YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V
Sbjct: 1187 PLAMSRHINQDHHR-YRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRV 1245
Query: 494 VMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKS 549
M+ +K R +RL D L IVFVN K+N D +A+ + + G+ TLHG K+
Sbjct: 1246 EMIAGEDK--RKKRLGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKT 1303
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
Q+QRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAG
Sbjct: 1304 QDQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAG 1363
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
K+GVA TFL D DV YDLKQMLI+S S VP EL KHEA++ KP
Sbjct: 1364 KSGVAITFLGNEDADVMYDLKQMLIKSPISRVPEELRKHEAAQSKP 1409
>gi|327356974|gb|EGE85831.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis ATCC 18188]
Length = 798
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 329/710 (46%), Positives = 436/710 (61%), Gaps = 79/710 (11%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLS--QPQTHGRNSS 60
R DE S KP FL++A+RE+LALE+R +++ Q+R + S P+ +G S
Sbjct: 85 READEAAS---KPKFLSRAEREKLALEKRAKEVENQRRLEANGTGPSSSRSPEMNGYPSP 141
Query: 61 DSRDRERE--------------RHRREREEEAKARER-----------ARLEKLAERE-- 93
SR + RH A R + + E+ E+
Sbjct: 142 PSRSNRIDGPSRASIPAGPRGLRHGEIPTAPAAMRTKQNDMPPPPLPGPKAEQKGEKRPS 201
Query: 94 -RERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E + LI+++Y+GS + KK+ + +E+ +F+F+W EDTS D N LYQN
Sbjct: 202 PEEAQAALIRQRYMGSGQTSNFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRST 260
Query: 148 AQLLFGRGFRAGMD--------RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLK 199
A +GRG AG R + L ++ + R R+ +E + +E +
Sbjct: 261 AN-FYGRGRLAGFSDEFADAVTRNYARALEDRDPEAGRVRAREILEMERRRKEEGGRHM- 318
Query: 200 EEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLT 259
+D HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+WAE L
Sbjct: 319 -------------LDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLP 365
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
LL +E+VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP +
Sbjct: 366 KRLLNIIEQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRL 425
Query: 320 S--EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
E +GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G
Sbjct: 426 DEFEWRRNDGPYAIILAPTRELAQQIELEAKKFSAPLGFNVVSIVGGHSLEEQAYSLRNG 485
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E++IATPGRL+DC+ERR V +QC YV++DEADRMID+GFE V +LDA+P +N KP+
Sbjct: 486 AEIIIATPGRLVDCIERRMIVFSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNQKPD 545
Query: 438 NEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
ED E + K YR T M++ATMPPAVER+ARKYLR P +VTIG G+A + +
Sbjct: 546 TEDAENPQAMSQHIGGKDRYRQTMMYTATMPPAVERIARKYLRRPAIVTIGNIGEAVDTV 605
Query: 490 SQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
Q V + +K R +RL + L + IVFVN K+N D VA+++ +GY TLH
Sbjct: 606 EQRVEFISGEDK--RKKRLAEILSSREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLH 663
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
G K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRT
Sbjct: 664 GSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIENYTHRIGRT 723
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GRAGK+G+A TFL D+DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 724 GRAGKSGIAITFLGNEDSDVLYDLKQMLMKSAISRVPEELRKHEAAQSKP 773
>gi|145257496|ref|XP_001401758.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
niger CBS 513.88]
gi|143359821|sp|A2QIL2.1|PRP28_ASPNC RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|134058672|emb|CAK38656.1| unnamed protein product [Aspergillus niger]
Length = 810
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/707 (45%), Positives = 435/707 (61%), Gaps = 69/707 (9%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKR-RQEQQQQLLSQPQTHGRNSS----- 60
E + KP FL+K +RE+LALE+R +++A +R + E + + TH + S
Sbjct: 93 EADAAAAKPKFLSKKEREKLALEKRAQEVAATRRLKSEHASNGVDRSATHSPSVSSEGPN 152
Query: 61 -DSRD---------------------RERERHRREREEEAKARERARLEKLA-------- 90
D+R R + H + + ++ L
Sbjct: 153 GDARSIPTGPRAMRNSDAAPTAPAAMRHSQSHNKNYDLAPPPPPKSMSFGLTSGKGDSRF 212
Query: 91 --ERERERELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
E E + L+K++Y+G+ + K+ K + +F+F+W EDTS D N LYQ+
Sbjct: 213 VDEDEAAAQAALVKQRYMGADQTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQH 272
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
HE FGRG AG + +A K + + + R+ + A L+ E
Sbjct: 273 RHETNF-FGRGRLAGFGDDVAESVAHKYARALEDRDREAGSIR------AREILEMERRR 325
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
++ ++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L L+
Sbjct: 326 REESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESNLPKRLME 385
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--E 322
+ RVGYK P+PIQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E
Sbjct: 386 LINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEW 445
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
+A+GPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++I
Sbjct: 446 RKADGPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLRDGAEIII 505
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++ED E
Sbjct: 506 ATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDAE 565
Query: 443 ----------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQH 492
D+ R YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q
Sbjct: 566 NPLAMSRHINHDQHR-YRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQR 624
Query: 493 VVMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
V M+ +K R +RL D L IVFVN K+N D +A+ + + G+ TLHG K
Sbjct: 625 VEMIAGEDK--RKKRLGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSK 682
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+Q+QRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRA
Sbjct: 683 TQDQREAALASVRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRA 742
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 743 GKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 789
>gi|451992643|gb|EMD85123.1| hypothetical protein COCHEDRAFT_1188822 [Cochliobolus
heterostrophus C5]
Length = 704
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/677 (46%), Positives = 434/677 (64%), Gaps = 54/677 (7%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ--THGRNSSDS---------R 63
P F+ KA+RE++ALE+R++++ + +RRQ L+ +P NS+ S R
Sbjct: 31 PRFIPKAERERIALEKRKKEVEEAQRRQANANDLVWKPSQDASSHNSAPSVPPVGPRAMR 90
Query: 64 DRERE----RHRREREEEAKARERARLEKLAERERE-RELELIKEQYLGSKKPKKRV--- 115
D E R RR + A + ++R E E +I+++Y+G+++ +
Sbjct: 91 DAPTEPSSMRDRRHGGDMAPPPPPPSENRKSKRPAEDTEAAMIRQRYMGAEQNQSTFSAK 150
Query: 116 --IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNE 173
K + + +F+F+W EDTS D N +YQ EA FGRG G +++ K
Sbjct: 151 KKRKRTTEKKFNFEWNEEEDTSHDYNPIYQQKTEASF-FGRGRLGGF----SEEVTDKAT 205
Query: 174 KEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR--------VDRHWSEKKLEEM 225
+ M E I +E PE +E A + D R +D+HWSEK+LE M
Sbjct: 206 QRMIEAI-----IERDPEHG-----RERAQQIIDMERRRKEKGGRAQLDKHWSEKRLENM 255
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
ERDWRIF+EDFNI+ KG IP PMRNW E L +L+R V+RVGY PSPIQ AAIP+
Sbjct: 256 RERDWRIFKEDFNIATKGGSIPNPMRNWDEAGLPDKLMRIVDRVGYTEPSPIQRAAIPIA 315
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
LQ RD+IG+A TGSGKTAAFVLP+L YI LPP++ N +GPYA+++APTRELAQQIE
Sbjct: 316 LQCRDLIGVARTGSGKTAAFVLPLLAYIMELPPLTAANRHDGPYALILAPTRELAQQIEV 375
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
ET KFA LG +VGG SIEEQ F++R G E++IATPGRL+DC+ERR VL+QC YV
Sbjct: 376 ETRKFAAPLGFNTAVLVGGHSIEEQSFQMRDGAEIIIATPGRLVDCIERRVLVLSQCTYV 435
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEELDEKRIYRTTYMFSATMPPA 462
++DEAD+MIDMGFE V +L+A+P +N KP++ ED + + +YR T M++ATMPPA
Sbjct: 436 IMDEADKMIDMGFEEPVNKILEALPVNNEKPDDDSAEDASVMRRDMYRQTMMYTATMPPA 495
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK-FSRLQRLLDELGD--KTAIV 519
+ER+A+KYLR P +VT+G G+ATE + Q ++ EK RLQ +L G+ IV
Sbjct: 496 LERIAKKYLRRPAIVTVGNLGEATETVEQRAEFIQGEEKRKKRLQEILTS-GEFAPPIIV 554
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FVN K+N D +A+++ +G+ TLHG K+QEQRE +L ++ + +VLVATD+AGRGID
Sbjct: 555 FVNIKRNCDAIARDIKHMGFSAATLHGSKTQEQREAALASLKSGQTSVLVATDLAGRGID 614
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG--KTGVATTFLTFHDTDVFYDLKQMLIQSN 637
I DV+ V+N++MP +IE YTHRIGRTGR G K GVA TF D DV YDLKQ+L++S
Sbjct: 615 IQDVSLVVNFNMPSSIESYTHRIGRTGRLGADKPGVAITFWGNEDADVLYDLKQILMKSQ 674
Query: 638 -SPVPPELAKHEASKFK 653
S VP +L KHEA++ K
Sbjct: 675 ISKVPEDLRKHEAAQQK 691
>gi|350632267|gb|EHA20635.1| hypothetical protein ASPNIDRAFT_190556 [Aspergillus niger ATCC
1015]
Length = 795
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 326/711 (45%), Positives = 436/711 (61%), Gaps = 77/711 (10%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKR-RQEQQQQLLSQPQTHGRNSS----- 60
E + KP FL+K +RE+LALE+R +++A +R + E + + TH + S
Sbjct: 78 EADAAAAKPKFLSKKEREKLALEKRAQEVAATRRLKSEHASNGVDRSATHSPSVSSEGPN 137
Query: 61 -DSRD---------------------RERERHRREREEEAKARERARLEKLA-------- 90
D+R R + H + + ++ L
Sbjct: 138 GDARSIPTGPRAMRNSDAAPTAPAAMRHSQSHNKNYDLAPPPPPKSMSFGLTSGKGDSRF 197
Query: 91 --ERERERELELIKEQYLGS--------KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNA 140
E E + L+K++Y+G+ KK +KR + +F+F+W EDTS D N
Sbjct: 198 VDEDEAAAQAALVKQRYMGADQTSNFSAKKKRKR----TTDRKFNFEWNAEEDTSGDYNP 253
Query: 141 LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE 200
LYQ+ HE FGRG AG + +A K + + + R+ + A L+
Sbjct: 254 LYQHRHETNF-FGRGRLAGFGDDVAESVAHKYARALEDRDREAGSIR------AREILEM 306
Query: 201 EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP 260
E ++ ++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L
Sbjct: 307 ERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESNLPK 366
Query: 261 ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS 320
L+ + RVGYK P+PIQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I
Sbjct: 367 RLMELINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRID 426
Query: 321 E--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 378
E +A+GPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ + +R G
Sbjct: 427 EFEWRKADGPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLRDGA 486
Query: 379 EVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++
Sbjct: 487 EIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDS 546
Query: 439 EDEE----------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL 488
ED E D+ R YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A +
Sbjct: 547 EDAENPLAMSRHINHDQHR-YRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDT 605
Query: 489 ISQHVVMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
+ Q V M+ +K R +RL D L IVFVN K+N D +A+ + + G+ TL
Sbjct: 606 VEQRVEMIAGEDK--RKKRLGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTL 663
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HG K+Q+QRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGR
Sbjct: 664 HGSKTQDQREAALASVRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGR 723
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
TGRAGK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 724 TGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 774
>gi|295668368|ref|XP_002794733.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226286149|gb|EEH41715.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 803
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 333/704 (47%), Positives = 434/704 (61%), Gaps = 69/704 (9%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQ--PQTHGRNSS 60
R DE S KP FL+KAQRE+LALE+R +++ ++R + S + +G S
Sbjct: 92 READEAAS---KPTFLSKAQREKLALEKRAKEVENERRLKANGTTSTSSRGSEANGYAFS 148
Query: 61 DSRDRERE-----------RHRRERE-EEAKARERARLEKLAE--------------RER 94
SR + R R+ E A A R++ +
Sbjct: 149 TSRYDATDVPSRPSIPTGPRSLRQAEIPTAPAAMRSKHNDMPPPSGPKTEQKGGKRPSPE 208
Query: 95 ERELELIKEQYLG-------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E + LI+++Y+G S K K+R + +E+ +F+F+W EDTS D N LYQN
Sbjct: 209 EAQAALIRQRYMGVDQTSNFSAKKKRR--RTTER-KFNFEWNADEDTSPDYNPLYQN-RS 264
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADL 205
FGRG AG E A+N E+ R E + E + + KEE
Sbjct: 265 TTNFFGRGRLAGFGD-EAADAVARNYARALED-RDPEAGSARAREILEMERRRKEEGGR- 321
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
+D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+WAE L LL
Sbjct: 322 -----HALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWAESGLPKRLLSI 376
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--EN 323
+++VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI LP + E
Sbjct: 377 IDKVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIGELPRLDEFEWR 436
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G E++IA
Sbjct: 437 RNDGPYAIILAPTRELAQQIEIEAKKFSTPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIA 496
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE- 442
TPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ED E
Sbjct: 497 TPGRLVDCIERRMIVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVANEKPDTEDAEN 556
Query: 443 -------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
+ K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V
Sbjct: 557 PQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNVGEAVDTVEQRVEF 616
Query: 496 MKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQE 551
+ +K R +RL + L + IVFVN K+N D VA+++ +GY TLHG K+QE
Sbjct: 617 VSGEDK--RKKRLAEILASREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLHGSKTQE 674
Query: 552 QREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKT 611
QRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+
Sbjct: 675 QREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKS 734
Query: 612 GVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GVA TFL D+DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 735 GVAITFLGNEDSDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 778
>gi|326477553|gb|EGE01563.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
equinum CBS 127.97]
Length = 812
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/712 (44%), Positives = 439/712 (61%), Gaps = 80/712 (11%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQ-------------------Q 45
DE S KP FL+KAQRE++ALE+R +++ +R +
Sbjct: 92 ADEAAS---KPKFLSKAQREKIALEKRMKEVDSVRRAKSAANGNSGSDSRTPDIETNGYS 148
Query: 46 QQLLSQPQTHGRN------------------SSDSRDRERERHRREREEEAKARERARLE 87
S+P GRN + + R ++ + + + A
Sbjct: 149 SASASRPGESGRNDGSRHIPTGPRALRHDTPTGPASMRSSQKGNDKNAQSSSASTSGNKG 208
Query: 88 KLAERERERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+ + + +LI+++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LY
Sbjct: 209 EKRTSPEDAQAQLIRQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNPLY 267
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKE- 200
QN EA FGRG +LA ++ + + +R+ +E++ EA +++ +E
Sbjct: 268 QNRSEANF-FGRG-----------RLAGFADEVVDDSVRRYARALEDRDLEAGSVRAREI 315
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E ++ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W+E
Sbjct: 316 LEMERRRKEESGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSLPNPMRSWSESG 375
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL ++ VGYK+PSPIQ +IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 376 LPKRLLEIIDSVGYKDPSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSLP 435
Query: 318 PISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
+ E +GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +R
Sbjct: 436 RLDEFEWRRNDGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNLR 495
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN K
Sbjct: 496 NGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEK 555
Query: 436 PENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
P+ E+ E + K YR T M++ATMP AVER+ARKYLR P +VTIG G+A +
Sbjct: 556 PDTEEAENAQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVD 615
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTT 543
+ Q V + +K R +RL + L + IVFVN K+N D VA+++ +G+ T
Sbjct: 616 TVEQRVEFVAGEDK--RKKRLAEILTSREYRPPIIVFVNIKRNCDAVARDIKHMGFSAVT 673
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIG
Sbjct: 674 LHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIG 733
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
RTGRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 734 RTGRAGKSGVAITFLGNEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 785
>gi|345567391|gb|EGX50323.1| hypothetical protein AOL_s00076g87 [Arthrobotrys oligospora ATCC
24927]
Length = 791
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/693 (47%), Positives = 432/693 (62%), Gaps = 76/693 (10%)
Query: 17 FLTKAQREQLALERRQEQI-AQQKRRQEQQQQLLSQPQT-------HGRNS--------- 59
FL+KA+RE LALERR +++ A+++ +E ++ L P T H N
Sbjct: 80 FLSKAEREALALERRAKEVEAKRQAEEESRKASLPPPPTAPSRQNGHHTNGIPNGPRHPP 139
Query: 60 -------------SDSRDRERERHRREREEEAKARERARLEKLAERERERELE------L 100
D RD E+ A K ++ +R+R+ E +
Sbjct: 140 SGPRSHRERERERGDHRDPPTGPASMRNEKFPMAPPPPPPSKSSQADRKRDAEEDAEAKV 199
Query: 101 IKEQYLGS-----KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
I+ +Y+G+ KK+ K SE+ +F+F+W EDTS+D N +Y N EA+ FGRG
Sbjct: 200 IRLRYMGADLDSNSLNKKKRRKTSER-KFTFEWGAEEDTSQDYNPIYANRSEAKF-FGRG 257
Query: 156 FRAGM---DRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKEEAADLYDTFDM 211
G DR ++ AA + EE R+ +E VE ++ L
Sbjct: 258 RLGGFAETDRSTKQYAAALESRGDAEERRRARELVEMDRKKRENLSWS------------ 305
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
D+HWSEK L+ M ERDWRIF+EDFNIS KG IP PMR+W E L LL + VGY
Sbjct: 306 --DKHWSEKPLDMMKERDWRIFKEDFNISTKGGGIPNPMRSWKESSLPQVLLDVIHSVGY 363
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K+PSPIQ AAIP+ L+ RDVIG+A TGSGKTA+F+LP+L YI LPP+ + +GPYA+
Sbjct: 364 KDPSPIQRAAIPIALRSRDVIGVAVTGSGKTASFILPLLVYIKDLPPLDNITKHDGPYAM 423
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTRELAQQIE E KFA L + VSIVGG SIEEQ + ++ G E+VIATPGRL+DC
Sbjct: 424 ILAPTRELAQQIEVEAAKFADPLNFRCVSIVGGHSIEEQSYSLKDGAEIVIATPGRLLDC 483
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------L 443
LERR VL+QC YV++DEADRMID+GFE V +L+++P SN+KP+ ED E +
Sbjct: 484 LERRVLVLSQCCYVIMDEADRMIDLGFEDPVNRILESLPVSNVKPDTEDAENPVEMSKII 543
Query: 444 DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFS 503
K YR T M++ATMPPA+ER+ARKYLR P +VTIG AG+A + + Q V + ++
Sbjct: 544 GGKERYRQTMMYTATMPPAIERIARKYLRRPAIVTIGNAGEAVDTVEQRVEFVAGEDR-- 601
Query: 504 RLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEG 559
R +RLL+ L IVFVN K+N DMVA++L G+ TLHG KSQEQRE +L+
Sbjct: 602 RKKRLLEILNSAMYAPPIIVFVNIKRNCDMVARDLKHAGWTAVTLHGSKSQEQREAALQQ 661
Query: 560 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
R + +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 662 LRQHQADVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLG 721
Query: 620 FHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
D DV YDLKQML +S+ S +P EL +HEA++
Sbjct: 722 SEDNDVMYDLKQMLQKSSISKLPDELRRHEAAQ 754
>gi|330796382|ref|XP_003286246.1| hypothetical protein DICPUDRAFT_54136 [Dictyostelium purpureum]
gi|325083751|gb|EGC37195.1| hypothetical protein DICPUDRAFT_54136 [Dictyostelium purpureum]
Length = 630
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/565 (51%), Positives = 384/565 (67%), Gaps = 46/565 (8%)
Query: 90 AERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ 149
+RERE EL I+ YLG KK + + EK +F FDW+ +EDTS D N LY ++ Q
Sbjct: 90 GKREREEELRDIQYDYLGLKKDESKKKIKGEKGKFIFDWDASEDTSSDYNELYSKKYDIQ 149
Query: 150 LLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTF 209
FG G G DR + LA+K DL DT
Sbjct: 150 PQFGHGTFGGYDRHQ---LASKK-------------------------------DLPDT- 174
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
HWS+K+L +MT+RDW IF+EDFNIS KG +P P+R+W E L ++L AV +
Sbjct: 175 ------HWSKKQLRDMTKRDWHIFKEDFNISTKGGVVPNPIRSWQESSLPRQVLDAVRHL 228
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
GY+ PSPIQM +IP+ + RD++GIAETGSGKT AFV+PM YIS+ P +++E EAEGPY
Sbjct: 229 GYEKPSPIQMQSIPVSVSGRDILGIAETGSGKTCAFVIPMCIYISKQPRLTKETEAEGPY 288
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
AVVMAPTREL QQIE+ET FA + G +VVS+VGGQ IEEQ +++ +GCE+V+ATPGRL
Sbjct: 289 AVVMAPTRELVQQIEKETRNFAQFYGFRVVSLVGGQPIEEQAYQLGKGCEIVVATPGRLN 348
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED----EELDE 445
DCL++RY VLNQCNY+VLDEAD MI++GFE QV VLDAMPS+NLK ENE+ +E D
Sbjct: 349 DCLQKRYLVLNQCNYIVLDEADMMINLGFESQVTSVLDAMPSTNLKSENEELAERQETDR 408
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSR 504
+R+YRTT +FSATMPP VE++A+KYLR P +TIG AGK + I Q V+ +K E++K
Sbjct: 409 ERVYRTTILFSATMPPQVEQIAKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEH 468
Query: 505 LQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L +L+ + I+FVN KK+ + + L++ G T LHGG+SQEQRE +L+ F+ K
Sbjct: 469 LVQLIKDGPPPPIIIFVNKKKHCENIGAVLEECGVSYTILHGGRSQEQREAALDNFKKKN 528
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+VL+AT VA RGI + V HVIN+D+P NIE YTHRIGRTGRAG +G+AT+F++ DT+
Sbjct: 529 SDVLIATGVASRGIHVDGVTHVINFDIPNNIEDYTHRIGRTGRAGSSGLATSFISDKDTE 588
Query: 625 VFYDLKQMLIQSNSPVPPELAKHEA 649
+ YDLK +L +N+ VP EL K+ A
Sbjct: 589 IMYDLKNILTATNNIVPIELLKNPA 613
>gi|326474132|gb|EGD98141.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
tonsurans CBS 112818]
Length = 809
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/712 (44%), Positives = 439/712 (61%), Gaps = 80/712 (11%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQ------------------ 46
DE S KP FL+KAQRE++ALE+R +++ +R +
Sbjct: 92 ADEAAS---KPKFLSKAQREKIALEKRMKEVDSVRRAKSAANGNSGSDSRTPDIETNGYF 148
Query: 47 -QLLSQPQTHGRN------------------SSDSRDRERERHRREREEEAKARERARLE 87
S+P GRN + + R ++ + + + A
Sbjct: 149 SASASRPGESGRNDGSRHIPTGPRALRHDTPTGPASMRSSQKGNDKNAQSSSASTSGNKG 208
Query: 88 KLAERERERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+ + + +LI+++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LY
Sbjct: 209 EKRTSPEDAQAQLIRQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNPLY 267
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKE- 200
QN EA FGRG +LA ++ + + +R+ +E++ EA +++ +E
Sbjct: 268 QNRSEANF-FGRG-----------RLAGFADEVVDDSVRRYARALEDRDLEAGSVRAREI 315
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E ++ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W+E
Sbjct: 316 LEMERRRKEESGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSWSESG 375
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL ++ VGYK+PSPIQ +IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 376 LPKRLLEIIDSVGYKDPSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSLP 435
Query: 318 PISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
+ E +GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +R
Sbjct: 436 RLDEFEWRRNDGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNLR 495
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN K
Sbjct: 496 NGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEK 555
Query: 436 PENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
P+ E+ E + K YR T M++ATMP AVER+ARKYLR P +VTIG G+A +
Sbjct: 556 PDTEEAENAQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVD 615
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTT 543
+ Q V + +K R +RL + L + IVFVN K+N D VA+++ +G+ T
Sbjct: 616 TVEQRVEFVAGEDK--RKKRLAEILTSREYRPPIIVFVNIKRNCDAVARDIKHMGFSAVT 673
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIG
Sbjct: 674 LHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIG 733
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
RTGRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 734 RTGRAGKSGVAITFLGNEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 785
>gi|302503157|ref|XP_003013539.1| hypothetical protein ARB_00357 [Arthroderma benhamiae CBS 112371]
gi|291177103|gb|EFE32899.1| hypothetical protein ARB_00357 [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/712 (45%), Positives = 444/712 (62%), Gaps = 80/712 (11%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQ------QQQLLSQPQTHGRN 58
DE S KP FL+KAQRE++ALE+R +++ +R + +T+G +
Sbjct: 92 ADEAAS---KPKFLSKAQREKIALEKRMKEVDSVRRAKSAANGNSGSDSRTPDIETNGFS 148
Query: 59 S-SDSRDRERERH------------------------RREREEEAKARERARLEKLAERE 93
S S SR E R+ R ++ K + + +
Sbjct: 149 SASASRTGETGRNDGSRHIPTGPRALRHDAPTGPASMRSNQKGNDKNSQSSSASASGNKG 208
Query: 94 REREL------ELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+R L +LI+++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LY
Sbjct: 209 EKRALPEDAQAQLIRQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNPLY 267
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKE- 200
QN EA FGRG +LA ++ + + +RK + +E++ EA +++ +E
Sbjct: 268 QNRSEANF-FGRG-----------RLAGFADEVVDDSVRKYAKALEDRDLEAGSVRAREI 315
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E ++ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W+E
Sbjct: 316 LEMERRRKEESGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSWSESG 375
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL ++ VGYK+PSPIQ +IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 376 LPKRLLEIIDSVGYKDPSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSLP 435
Query: 318 PISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
+ E +GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +R
Sbjct: 436 RLDEFEWRRNDGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNLR 495
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN K
Sbjct: 496 NGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEK 555
Query: 436 PENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
P+ E+ E + K YR T M++ATMP AVER+ARKYLR P +VTIG G+A +
Sbjct: 556 PDTEEAENAQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVD 615
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTT 543
+ Q V + +K R +RL + L + IVFVN K+N D VA+++ +G+ T
Sbjct: 616 TVEQRVEFVAGEDK--RKKRLAEILTSREYRPPIIVFVNIKRNCDAVARDIKHMGFSAVT 673
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIG
Sbjct: 674 LHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIG 733
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
RTGRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 734 RTGRAGKSGVAITFLGSEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 785
>gi|327296165|ref|XP_003232777.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
rubrum CBS 118892]
gi|326465088|gb|EGD90541.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
rubrum CBS 118892]
Length = 811
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/712 (45%), Positives = 444/712 (62%), Gaps = 80/712 (11%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQP------QTHGRN 58
DE S KP FL+KAQRE++ALE+R +++ +R + +T+G +
Sbjct: 91 ADEAAS---KPKFLSKAQREKIALEKRMKEVDSVRRAKSAANGNSGSDSRTLDIETNGYS 147
Query: 59 S-SDSRDRERERH------------------------RREREEEAKARERARLEKLAERE 93
S S SR E R+ R ++ K + + +
Sbjct: 148 SASASRAGETGRNDGSRHIPTGPRALRHDAPTGPASMRSNQKGNDKTSQSSSASTSGNKG 207
Query: 94 REREL------ELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+R L +LI+++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LY
Sbjct: 208 EKRALPEDAQAQLIRQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNPLY 266
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKE- 200
QN EA FGRG +LA ++ + + +RK +E++ EA +++ +E
Sbjct: 267 QNRSEANF-FGRG-----------RLAGFADEVVDDSVRKYARALEDRDLEAGSVRAREI 314
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E ++ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W+E
Sbjct: 315 LEMERRRKEESGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSWSESG 374
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL ++ VGYK+PSPIQ +IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 375 LPKRLLEIIDSVGYKDPSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSLP 434
Query: 318 PISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
+ E +GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +R
Sbjct: 435 RLDEFEWRRNDGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNLR 494
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN K
Sbjct: 495 NGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEK 554
Query: 436 PENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
P++E+ E + K YR T M++ATMP AVER+ARKYLR P +VTIG G+A +
Sbjct: 555 PDSEEAENAQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVD 614
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTT 543
+ Q V + +K R +RL + L + IVFVN K+N D VA+++ +G+ T
Sbjct: 615 TVEQRVEFVSGEDK--RKKRLAEILTSREYRPPIIVFVNIKRNCDAVARDIKHMGFSAVT 672
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIG
Sbjct: 673 LHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIG 732
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
RTGRAGK+G+A TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 733 RTGRAGKSGIAITFLGSEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 784
>gi|255942831|ref|XP_002562184.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586917|emb|CAP94570.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 790
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 329/703 (46%), Positives = 440/703 (62%), Gaps = 68/703 (9%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIA--QQKRRQEQQQQLLSQPQ----------- 53
E + KP FL+KAQRE+LALE+R +++ +Q + + L S P
Sbjct: 87 EADAATSKPKFLSKAQREKLALEKRAQEVEAERQAKARTNGNGLASAPSSVRPNIREEPV 146
Query: 54 -----THGRNSSDS--------RDRERERHRREREEE-----AKARERARLEKLAERERE 95
T R D R R+ ++R R+++ +K + RL + E E
Sbjct: 147 VRHVPTGPRAMRDDPATGPGGMRKGGRQSNQRYRDQDMPPPQSKTKGEKRLTE--EDEAA 204
Query: 96 RELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
L K +Y+G+ + K+ K + +F+F+W EDTS D N LYQ EA
Sbjct: 205 ALAALTKHRYMGADQTSNFSAKKKRKRTADRKFNFEWNVEEDTSGDYNPLYQRRQEANF- 263
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKK--EGVEEKPEEAAALK----LKEEAADL 205
FGRG AG E+ +++ +K E + + EA + + L+ E
Sbjct: 264 FGRGRLAGFG------------DEVADDVARKYAEALATRDHEAGSARAQQMLEMERRRR 311
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
++ ++D+HWSEK+L+ M ERDWRIF+EDFNI+ KG +P PMR+W E L LL
Sbjct: 312 EESKRTQIDKHWSEKRLDLMRERDWRIFKEDFNIATKGGSVPNPMRSWEESSLPKRLLEL 371
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE- 324
VERVGYK+P+ IQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YIS LP + +ENE
Sbjct: 372 VERVGYKDPTAIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISALPRL-DENEW 430
Query: 325 --AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
EGPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ F +R G E++I
Sbjct: 431 RKNEGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAFSLRNGAEIII 490
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ E+ E
Sbjct: 491 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAE 550
Query: 443 LD---EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-E 498
+ YR T M++ATMP AVER+ARKYLR P ++TIG G+A + + Q V M+ E
Sbjct: 551 NSMAMSQHQYRQTMMYTATMPAAVERIARKYLRRPAIITIGGVGEAVDTVEQRVEMISGE 610
Query: 499 SEKFSRLQRLLDELGD--KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
++ RL +L GD IVFVN K+N D +A+ + ++G+ TLHG K+Q+QRE +
Sbjct: 611 DKRKKRLAEILSS-GDFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQDQREAA 669
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L R +VLVATD+AGRGID+PDV+ VIN++M +IE YTHRIGRTGRAGK+GVA T
Sbjct: 670 LASVRNGSTDVLVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAIT 729
Query: 617 FLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIP 658
FL D+DV YDLKQMLI+S S VP EL KHEA++ KP P
Sbjct: 730 FLGSEDSDVMYDLKQMLIKSPISRVPEELRKHEAAQSKPSRGP 772
>gi|115397801|ref|XP_001214492.1| hypothetical protein ATEG_05314 [Aspergillus terreus NIH2624]
gi|121738078|sp|Q0CLX0.1|PRP28_ASPTN RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|114192683|gb|EAU34383.1| hypothetical protein ATEG_05314 [Aspergillus terreus NIH2624]
Length = 783
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 324/695 (46%), Positives = 426/695 (61%), Gaps = 60/695 (8%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRE 66
E + KP FL+K +RE++ALE+R +++ Q +R+ + + + DR
Sbjct: 82 EADAAAAKPKFLSKKEREKIALEKRAKEVEQSRRKTSTNGASDTASVRSESATPNGVDRT 141
Query: 67 RE---RHRREREEEAKARERARLEK-----------------LAERERERELELIKEQYL 106
R R EA R R + + E E + L+K++Y+
Sbjct: 142 ASIPTGPRAMRTSEAPPPPRPRHDSSSNGNGNSNSNSNSNGTVDEDEAAAQAALVKQRYM 201
Query: 107 GS--------KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRA 158
G+ KK +KR + +F+F+W EDTSRD N LY HEA FGRG A
Sbjct: 202 GAEMTSSFSAKKKRKR----TTDRKFNFEWNAEEDTSRDYNPLYAQRHEANF-FGRGRLA 256
Query: 159 GMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWS 218
G +A K + + R+ V A L+ E ++ ++D+HWS
Sbjct: 257 GFGDDVADGVARKYAAALEDRDREAGSVR------AREILEMERRRREESTRNQLDKHWS 310
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
EKKLE M ERDWRIF+EDFNI+ KG +P PMR+WAE L LL V RVGYK+P+PIQ
Sbjct: 311 EKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWAESGLPSRLLDLVHRVGYKDPTPIQ 370
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--EENEAEGPYAVVMAPT 336
AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E + +GPYA+V+APT
Sbjct: 371 RAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPT 430
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRY 396
RELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++IATPGRL+DC+ERR
Sbjct: 431 RELAQQIEIEAKKFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRL 490
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI-------- 448
VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+++ E
Sbjct: 491 LVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAENAAAMSQLHHAGGG 550
Query: 449 ----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V ++ +K R
Sbjct: 551 RDTRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDK--R 608
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L
Sbjct: 609 KKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASV 668
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL
Sbjct: 669 RNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGN 728
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQMLI+S S VP EL KHEA++ KP
Sbjct: 729 EDADVMYDLKQMLIKSPISRVPDELRKHEAAQQKP 763
>gi|212540616|ref|XP_002150463.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210067762|gb|EEA21854.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 808
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/713 (44%), Positives = 448/713 (62%), Gaps = 81/713 (11%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHG---------R 57
E + KP FL+KA+RE+LALE+R +++ ++R + +Q + ++ +G R
Sbjct: 89 EADAAASKPKFLSKAERERLALEKRAKEVEAERRAKIEQGRTTNESVQNGTISENINGDR 148
Query: 58 NSSDSRD-----------------------RERERHRREREEEAKARERARLEKLAER-- 92
+ DSR R ++ ++ +R K +
Sbjct: 149 ANGDSRSAPVPTGPRALRNDGEIPRGPAAMRNQQPNKDYDMTPPAPPKRIAFGKGDSKGD 208
Query: 93 ----ERERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQ 143
E E E EL++++Y+G+ + KK+ + +E+ +F+F+W EDTS+D N LYQ
Sbjct: 209 KHVSEAEAEAELVRQRYMGASQTSNFSAKKKRKRTTER-KFNFEWNAEEDTSKDYNPLYQ 267
Query: 144 NPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK--EGVEEKPEEAAALKLKE- 200
N A FGRG AG ++M ++ K+ + +E++ EA +++ +E
Sbjct: 268 NKAHANF-FGRGRLAGFG------------EDMADDATKRYVQALEDRDREAGSVRAREI 314
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E ++ +++HWSEK+L++M ERDWRIF+EDFNIS KG +P PMR+W E
Sbjct: 315 LEMERRRKEESSRTAIEKHWSEKRLDQMRERDWRIFKEDFNISTKGGSVPNPMRSWEESG 374
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL +++VGY +P+PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YI+ LP
Sbjct: 375 LPRRLLDLIKQVGYADPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYIAELP 434
Query: 318 PISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
+ E + +GPYA+++APTRELAQQIE E KF+ L VVSIVGG S+EEQ + +R
Sbjct: 435 RLDEFEWRKNDGPYAIILAPTRELAQQIEIEAKKFSKPLNFNVVSIVGGHSLEEQAYSLR 494
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
G E++IATPGRL+DCLERR VL+QC YV++DEADRMID+GFE V +LDA+P +N K
Sbjct: 495 DGAEIIIATPGRLVDCLERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEK 554
Query: 436 PENEDEELDEK---------RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
P+ E+ E + R YR T M++ATMP AVER+ARKYLR P +VTIG G+A
Sbjct: 555 PDTEEAEDAQAMSQHVGGRDRRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNVGQAV 614
Query: 487 ELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVT 542
+ + Q V + +K R +RL D L IVFVN K+N D VAK++ ++G+
Sbjct: 615 DTVEQRVEFVAGEDK--RKKRLADILMSGQFQPPIIVFVNIKRNCDAVAKDIKQMGFSSV 672
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRI
Sbjct: 673 TLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRI 732
Query: 603 GRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GRTGRAGK+GVA TFL DTDV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 733 GRTGRAGKSGVAITFLGNEDTDVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 785
>gi|307201507|gb|EFN81270.1| Probable ATP-dependent RNA helicase DDX23 [Harpegnathos saltator]
Length = 679
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/467 (59%), Positives = 344/467 (73%), Gaps = 11/467 (2%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
DRHWSEK L EMTERDWRIFRED+NI+ KG +IP P+R+W E E+L +++VGYK+
Sbjct: 214 DRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKD 273
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYAVV 332
+PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I+ LP I EA+ GPY+++
Sbjct: 274 LTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSII 333
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIEEET KF LGI+ V +VGG S EEQGFR+R GCE+VIATPGRLID L
Sbjct: 334 LAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVL 393
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---- 448
E RY VLNQC Y+VLDEADRMIDMGFEP V +L+ MP +NLKP+NED E +EK +
Sbjct: 394 ENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYN 453
Query: 449 ----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
YR T MF+ATMPPAVERLAR YLR P VV IG+ GK TE Q V +M E++K +
Sbjct: 454 TKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKK 513
Query: 505 LQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L +L + I+FVN KK AD++A+ L+KLGY TLHGGK QEQRE +L ++
Sbjct: 514 LMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGS 573
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
++LVATDVAGRGIDI DV+ VINYDM IE YTHRIGRTGRAGK G+A +F T D+
Sbjct: 574 KDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSH 633
Query: 625 VFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+FYDLKQ ++ S S PPEL H ++ KPGT+ + RR + +FA
Sbjct: 634 LFYDLKQTILASPISTCPPELLNHPDAQHKPGTVVTK-KRREEKIFA 679
>gi|7446043|pir||T15942 hypothetical protein F01F1.7 - Caenorhabditis elegans
Length = 701
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 294/547 (53%), Positives = 380/547 (69%), Gaps = 17/547 (3%)
Query: 101 IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM 160
+K++YLG +K KK+ + + +F FDW+ EDTS+D N LYQ+ HE Q FGRG AG
Sbjct: 159 VKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTSQDYNKLYQSRHEIQF-FGRGSVAGT 217
Query: 161 DRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEK 220
D QKK +EM E R V+EK +E L+ + + DRHW K
Sbjct: 218 DVNAQKKEKNSFYQEMMENRRT---VDEKEQEMHRLEKELKKEKKV----AHDDRHWRMK 270
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+L EM++RDWRIFREDFNIS KG ++PRP+RNW E E+ +AV+ +GY P+PIQ
Sbjct: 271 ELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQ 330
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTREL 339
AIP+GLQ RDVIG+AETGSGKTAAF+LP+L +I+ LP + +E+ GPYA++MAPTREL
Sbjct: 331 AIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL 390
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQIEEET KF LGIK VS++GG S E+QG ++R G EVVIATPGRL+D LE RY +L
Sbjct: 391 AQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLL 450
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI--------YRT 451
NQC YV+LDEADRM+DMGFEP V VL+ MP +N+K + ++ + +E + YR
Sbjct: 451 NQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQ 510
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T MF+ATM A+ERLAR+YLR P VV IG+AGK TE + Q V M+ E K +L +L+
Sbjct: 511 TVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLES 570
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
I+FVN KK ADM++K L KLG++ T LHGGK Q+QRE +L+ + ++LVAT
Sbjct: 571 QFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVAT 630
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
DVAGRGID+ DV+ V+NYDM +IE YTHRIGRTGRAGK G A TFLT DT V++DLKQ
Sbjct: 631 DVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQ 690
Query: 632 MLIQSNS 638
+ I + +
Sbjct: 691 VKIVTET 697
>gi|119500728|ref|XP_001267121.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
gi|143359899|sp|A1CX72.1|PRP28_NEOFI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119415286|gb|EAW25224.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
Length = 796
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/569 (52%), Positives = 385/569 (67%), Gaps = 23/569 (4%)
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
LIK++Y+G++K K+ K + +F+F+W EDTS D N LYQ HEA +GRG
Sbjct: 216 LIKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANF-YGRG 274
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AG LA K + + + R+ + A L+ E ++ ++D+
Sbjct: 275 RLAGFGDDVADTLAQKYARALEDRDREAGSIR------AREILEMERRRREESTRNQLDK 328
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L LL V++VGYK P+
Sbjct: 329 HWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPT 388
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--EENEAEGPYAVVM 333
PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YIS LP I E + +GPYA+V+
Sbjct: 389 PIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVL 448
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+E
Sbjct: 449 APTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIE 508
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---KRIYR 450
RR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ E+ E YR
Sbjct: 509 RRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSHRYR 568
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD 510
T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ +K R +RL D
Sbjct: 569 QTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDK--RKKRLAD 626
Query: 511 ELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
L IVFVN K+N D +A+ + ++G+ TLHG K+QEQRE +L R +
Sbjct: 627 ILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTD 686
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL D DV
Sbjct: 687 VLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVM 746
Query: 627 YDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YDLKQML++S S VP EL KHEA++ KP
Sbjct: 747 YDLKQMLMKSPISRVPEELRKHEAAQSKP 775
>gi|302660003|ref|XP_003021686.1| hypothetical protein TRV_04197 [Trichophyton verrucosum HKI 0517]
gi|291185595|gb|EFE41068.1| hypothetical protein TRV_04197 [Trichophyton verrucosum HKI 0517]
Length = 813
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/713 (45%), Positives = 438/713 (61%), Gaps = 82/713 (11%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQ-------------------Q 45
DE S KP FL+KAQRE++ALE+R +++ +R +
Sbjct: 93 ADEAAS---KPKFLSKAQREKIALEKRMKEVDSVRRAKSAANGNSGSDSRTPDIETNGYS 149
Query: 46 QQLLSQPQTHGRNSSDSRDRERERHRREREEEAKARERA-------------------RL 86
S+ GRN R R A R+ +
Sbjct: 150 SAFASRTGETGRNDGSRHIPTGPRALRHDAPTGPASMRSNQKGNDKNQQSSSASASGNKG 209
Query: 87 EKLAERERERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNAL 141
EK A E + + +LI+++Y+G+ + KK+ + +E+ +F+F+W EDTS D N L
Sbjct: 210 EKRALPE-DAQAQLIRQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNPL 267
Query: 142 YQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK-KEGVEEKPEEAAALKLKE 200
YQN EA FGRG +LA ++ + + +R+ +E++ EA +++ +E
Sbjct: 268 YQNRSEANF-FGRG-----------RLAGFADEVVDDSVRRYARALEDRDLEAGSVRARE 315
Query: 201 ----EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEG 256
E ++ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W+E
Sbjct: 316 ILEMERRRKEESGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSWSES 375
Query: 257 KLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRL 316
L LL ++ VGYK+PSPIQ +IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS L
Sbjct: 376 GLPKRLLEIIDSVGYKDPSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 435
Query: 317 PPISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI 374
P + E +GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +
Sbjct: 436 PRLDEFEWRRNDGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNL 495
Query: 375 RQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNL 434
R G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN
Sbjct: 496 RNGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNE 555
Query: 435 KPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
KP+ E+ E + K YR T M++ATMP AVER+ARKYLR P +VTIG G+A
Sbjct: 556 KPDTEEAENAQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAV 615
Query: 487 ELISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVT 542
+ + Q V + +K R +RL + L + IVFVN K+N D VA+++ +G+
Sbjct: 616 DTVEQRVEFVAGEDK--RKKRLAEILTSREYRPPIIVFVNIKRNCDAVARDIKHMGFSAV 673
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRI
Sbjct: 674 TLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRI 733
Query: 603 GRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GRTGRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 734 GRTGRAGKSGVAITFLGSEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 786
>gi|315051548|ref|XP_003175148.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Arthroderma
gypseum CBS 118893]
gi|311340463|gb|EFQ99665.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Arthroderma
gypseum CBS 118893]
Length = 813
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 324/713 (45%), Positives = 440/713 (61%), Gaps = 81/713 (11%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKR------------------------ 40
DE S KP FL+KAQRE++ALE+R +++ +R
Sbjct: 92 ADEAAS---KPKFLSKAQREKIALEKRVKEVDSGRRAKSTANGSSGSDSRTLDTDSNGYS 148
Query: 41 -----------RQEQQQQLLSQPQT--HGRNSSDSRDRERERHRREREEEAKARERA--R 85
R + + + + P+ H S + R ++ +R ++ + + +
Sbjct: 149 SALASRSGESSRGDDSRHIPTGPRALRHDAPSGPASMRPNQQKGNDRNAQSSSASTSGNK 208
Query: 86 LEKLAERERERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNA 140
EK A E + + +LI+++Y+G+ + KK+ + +E+ +F+F+W EDTS D N
Sbjct: 209 GEKRALPE-DAQAQLIRQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNP 266
Query: 141 LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE 200
LYQN EA FGRG AG +E R +E++ EA + + +E
Sbjct: 267 LYQNRSEANF-FGRGRLAGF----------ADEVVDNSVKRYARALEDRDLEAGSARARE 315
Query: 201 ----EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEG 256
E ++ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W+E
Sbjct: 316 ILEMERRRKEESGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSWSES 375
Query: 257 KLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRL 316
L LL ++ VGYK+PSPIQ +IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS L
Sbjct: 376 GLPKRLLEIIDSVGYKDPSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 435
Query: 317 PPISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI 374
P + E +GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +
Sbjct: 436 PRLDEFEWRRNDGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNL 495
Query: 375 RQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNL 434
R G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN
Sbjct: 496 RNGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNE 555
Query: 435 KPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
KP+ E+ E + K YR T M++ATMP AVER+ARKYLR P +VTIG G+A
Sbjct: 556 KPDTEEAENAQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAV 615
Query: 487 ELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVT 542
+ + Q V + +K R +RL + L + IVFVN K+N D VA+++ +G+
Sbjct: 616 DTVEQRVEFVAGEDK--RKKRLAEILTSRDYRPPIIVFVNIKRNCDAVARDIKHMGFSAV 673
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRI
Sbjct: 674 TLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRI 733
Query: 603 GRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GRTGRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 734 GRTGRAGKSGVAITFLGSEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 786
>gi|118597486|sp|Q0UWC8.1|PRP28_PHANO RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 746
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/671 (47%), Positives = 426/671 (63%), Gaps = 41/671 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FL+KA+RE++ALE+R++++ + +RR+E + G + S R R
Sbjct: 79 KPKFLSKAERERIALEKRRKEVEEAQRRREGSNSSTNGASHKGHYDASSSIPTGPRAMRP 138
Query: 74 REEEAKARERARL-----------EKLAERE--RERELELIKEQYLGSKKPKKRV----- 115
+ R +K +R + E +I+++Y+G+++ +
Sbjct: 139 EAPSGPPSRQQRSNGDMAPPPLPDKKTGKRPPPEDAEAAMIRQRYMGAEQNQSTFSAKKK 198
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKE 175
K + + +F+F+W EDTS D N +YQ EA G + + + ++
Sbjct: 199 RKRTTEKKFNFEWNEEEDTSYDYNPIYQQKAEAGFF-----GRGRLGGFTEDVTEQGTQK 253
Query: 176 MREEIRKKEGVEEKPEEAAALKL----KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWR 231
E + +++ V + L + KEE ++D+HWSEKKLE M ERDWR
Sbjct: 254 FIEAMIERDPVSGRERAERILDMERRRKEEGGR------AQLDKHWSEKKLEHMRERDWR 307
Query: 232 IFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
IF+EDFNI+ KG IP PMRNW E L ++LR VE VGY PS +Q AAIP+ LQ RD+
Sbjct: 308 IFKEDFNIATKGGAIPNPMRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDL 367
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
IG+A TGSGKTA+FVLP+L YIS+LPP+ N A+GPYA+V+APTRELAQQIE ET KFA
Sbjct: 368 IGVAVTGSGKTASFVLPLLVYISQLPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFA 427
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
LG IVGG SIEEQ F++R G E+VIATPGRL+DC+ERR VL+QC YV++DEAD
Sbjct: 428 APLGFNTAVIVGGHSIEEQAFQMRDGAEIVIATPGRLVDCIERRMLVLSQCTYVIMDEAD 487
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEELDEKRIYRTTYMFSATMPPAVERLAR 468
RMIDMGFE V +LDA+P +N KP++ ED ++ +YR T M++ATMP AVER+AR
Sbjct: 488 RMIDMGFEEPVNKILDALPVTNEKPDSDAAEDPNAMKRGMYRQTMMYTATMPTAVERIAR 547
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEK-FSRLQRLLDELGDKTA--IVFVNTKK 525
KYLR P +VTIG G+A E + Q V ++ EK RLQ +L+ G+ T IVFVN K+
Sbjct: 548 KYLRRPAIVTIGNVGEAVETVEQRVEHIQGEEKRKKRLQEILNS-GEFTPPIIVFVNIKR 606
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
N D +A+++ +G+ TLHG K+QEQRE +L R R +VLVATD+AGRGIDI DV+
Sbjct: 607 NCDAIARDIKNMGFSSVTLHGSKTQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSL 666
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPEL 644
V+N++M +IE YTHRIGRTGRAGK+GVA TF D DV YDLKQML +S S VP +L
Sbjct: 667 VVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLYDLKQMLTKSQISKVPEDL 726
Query: 645 AKHEASKFKPG 655
KHEA++ K G
Sbjct: 727 RKHEAAQQKGG 737
>gi|322701026|gb|EFY92777.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
acridum CQMa 102]
Length = 712
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 321/676 (47%), Positives = 434/676 (64%), Gaps = 46/676 (6%)
Query: 14 KPLFLTKAQREQLALE--RRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERE--- 68
KP F+ KAQRE++A E +R+E ++K E Q++ + + RN S S
Sbjct: 21 KPRFIPKAQRERMAAEQAKREEDEKKRKAADEAQKRREDERKWESRNGSSSTAHRTPNGP 80
Query: 69 -------RHRREREEEAKARERARLEKLAERERERELELIKEQYLG-------SKKPKKR 114
R +R+ ++K ++ +K + + E L + +YLG S KK+
Sbjct: 81 TQPPTGPRAMNQRKGDSKKSDKVNGDK--KSAEDIEATLFRSRYLGPEVNQQSSFSAKKK 138
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMNALYQNP--HEAQLLFGRG--FRAGMDRREQKKLAA 170
++ +EK +F+F+W+ +DTSRD + +Y+N + L G G F +RR +K+
Sbjct: 139 RMRTTEK-KFNFEWDLEDDTSRDNDPIYKNQAVNRGGSLAGLGGEFDEEAERRARKRARL 197
Query: 171 KNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDW 230
E+++ + +G+ E A A K KE A + RHWSEKKL EM ERDW
Sbjct: 198 IEERDVEHGKERAKGIMEDFYRARA-KAKERAER------TGLGRHWSEKKLGEMRERDW 250
Query: 231 RIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRD 290
RIF+EDF IS KG IP PMR+W E L LL V+RVGYK P+PIQ AAIP+ LQ RD
Sbjct: 251 RIFKEDFGISTKGGAIPDPMRSWEESGLPQRLLDIVDRVGYKEPTPIQRAAIPIALQARD 310
Query: 291 VIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKF 350
+IG+A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KF
Sbjct: 311 LIGVAVTGSGKTAAFLLPLLVYISDLPPLTEVNKNDGPYALILAPTRELVQQIETEAKKF 370
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
A LG + VSIVGG S+EEQ F +R G E+++ATPGRL+DC+ERR VL+QC Y+++DEA
Sbjct: 371 AEPLGFRCVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCIERRLLVLSQCCYIIMDEA 430
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPA 462
DRMID+GFE V +LDA+P SN KP+ +D E L + YR T M++ATMPP
Sbjct: 431 DRMIDLGFEESVNKILDALPVSNEKPDTDDAENAQLMKSYLGSRDKYRQTMMYTATMPPL 490
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLL--DELGDKTAIV 519
VER+A+KYLR P TIG AG+A + + Q V + E + RLQ +L +E IV
Sbjct: 491 VERIAKKYLRRPATATIGNAGEAVDTVEQRVEFVSGEDRRKKRLQEILSKNEFAPPI-IV 549
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FVN K+N D VA+++ +G+ TLHG K+QEQRE +L R+ VLVATD+AGRGID
Sbjct: 550 FVNIKRNCDAVARDIKSMGWSTVTLHGSKTQEQREAALASVRSGATQVLVATDLAGRGID 609
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-S 638
+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL D DV YDL+QML +S+ S
Sbjct: 610 VPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLRQMLSKSSIS 669
Query: 639 PVPPELAKHEASKFKP 654
VP EL +HEA++ KP
Sbjct: 670 KVPEELKRHEAAQSKP 685
>gi|70994152|ref|XP_751923.1| DEAD/DEAH box helicase [Aspergillus fumigatus Af293]
gi|74671396|sp|Q4WPE9.1|PRP28_ASPFU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|66849557|gb|EAL89885.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus Af293]
gi|159125162|gb|EDP50279.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus A1163]
Length = 796
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 299/569 (52%), Positives = 385/569 (67%), Gaps = 23/569 (4%)
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
LIK++Y+G++K K+ K + +F+F+W EDTS D N LYQ HEA +GRG
Sbjct: 216 LIKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANF-YGRG 274
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AG LA K + + + R+ + A L+ E ++ ++D+
Sbjct: 275 RLAGFGDDVADTLAQKYARALEDRDREAGSIR------AREILEMERRRREESTRNQLDK 328
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L LL V++VGYK P+
Sbjct: 329 HWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPT 388
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--EENEAEGPYAVVM 333
PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YIS LP I E + +GPYA+V+
Sbjct: 389 PIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVL 448
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+E
Sbjct: 449 APTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIE 508
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---KRIYR 450
RR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ E+ E YR
Sbjct: 509 RRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSHRYR 568
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD 510
T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ +K R +RL D
Sbjct: 569 QTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDK--RKKRLAD 626
Query: 511 ELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
L IVFVN K+N D +A+ + ++G+ TLHG K+QEQRE +L R +
Sbjct: 627 ILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTD 686
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL D DV
Sbjct: 687 VLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVM 746
Query: 627 YDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YDLKQML++S S VP EL KHEA++ KP
Sbjct: 747 YDLKQMLMKSPISRVPEELRKHEAAQSKP 775
>gi|451848500|gb|EMD61805.1| hypothetical protein COCSADRAFT_224467 [Cochliobolus sativus
ND90Pr]
Length = 704
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/677 (46%), Positives = 434/677 (64%), Gaps = 54/677 (7%)
Query: 15 PLFLTKAQREQLALERRQEQIAQ-QKRRQEQQQQLLSQPQTHGRNSSDS----------R 63
P F+ KA+RE++ALE+R++++ + QKRR+ + +P G + + + R
Sbjct: 31 PKFIPKAERERIALEKRKKEVEEAQKRREASGNDRVWKPSQDGPSQNGAPFVPVGPRAMR 90
Query: 64 DRERE----RHRREREEEAKARERARLEKLAERERE-RELELIKEQYLGSKKPKKRV--- 115
D E R RR + + ++R E E +I+++Y+G+++ +
Sbjct: 91 DAPTEPSSMRDRRHGGGDMAPPPPPSENRKSKRPAEDTEAAMIRQRYMGAEQNQSTFSAK 150
Query: 116 --IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNE 173
K + + +F+F+W EDTS D N +YQ EA FGRG G +++ K
Sbjct: 151 KKRKRTTEKKFNFEWNEEEDTSHDYNPIYQQKAEASF-FGRGRLGGF----SEEVTDKAT 205
Query: 174 KEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR--------VDRHWSEKKLEEM 225
+ M E I +E PE +E A + D R +D+HWSEK+LE M
Sbjct: 206 QRMIEAI-----IERDPEHG-----RERAQQMIDMERRRKEKGGRAQLDKHWSEKRLENM 255
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
ERDWRIF+EDFNI+ KG IP PMRNW E L +L+R V+RVGY PSPIQ AAIP+
Sbjct: 256 RERDWRIFKEDFNIATKGGSIPNPMRNWDEAGLPDKLMRIVDRVGYTEPSPIQRAAIPIA 315
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
LQ RD+IG+A TGSGKTAAFVLP+L YI LPP++ N +GPYA+++APTRELAQQIE
Sbjct: 316 LQCRDLIGVARTGSGKTAAFVLPLLAYIMELPPLTAANRHDGPYALILAPTRELAQQIEV 375
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
ET KFA LG +VGG SIEEQ F++R G E++IATPGRL+DC+ERR VL+QC YV
Sbjct: 376 ETRKFAAPLGFNTAVLVGGHSIEEQSFQMRDGAEIIIATPGRLVDCIERRVLVLSQCTYV 435
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEELDEKRIYRTTYMFSATMPPA 462
++DEAD+MIDMGFE V +L+A+P +N KP++ ED + + +YR T M++ATMPPA
Sbjct: 436 IMDEADKMIDMGFEEPVNKILEALPVNNEKPDDESAEDASVMRRDMYRQTMMYTATMPPA 495
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK-FSRLQRLLDELGDKTA--IV 519
+ER+A+KYLR P +VT+G G+ATE + Q ++ EK RLQ +L G+ A IV
Sbjct: 496 LERIAKKYLRRPAIVTVGNLGEATETVEQRAEFIQGEEKRKKRLQEILTS-GEFAAPIIV 554
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FVN K+N D +A+++ +G+ TLHG K+QEQRE +L ++ + +VLVATD+AGRGID
Sbjct: 555 FVNIKRNCDAIARDIKHMGFSAATLHGSKTQEQREAALASLKSGQTSVLVATDLAGRGID 614
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG--KTGVATTFLTFHDTDVFYDLKQMLIQSN 637
I DV+ V+N++MP +IE YTHRIGRTGR G K GVA TF D DV YDLKQ+L++S
Sbjct: 615 IQDVSLVVNFNMPSSIESYTHRIGRTGRLGADKPGVAITFWGNEDADVLYDLKQILMKSQ 674
Query: 638 -SPVPPELAKHEASKFK 653
S VP +L KHEA++ K
Sbjct: 675 ISKVPEDLRKHEAAQQK 691
>gi|169602116|ref|XP_001794480.1| hypothetical protein SNOG_03936 [Phaeosphaeria nodorum SN15]
gi|160706086|gb|EAT89141.2| hypothetical protein SNOG_03936 [Phaeosphaeria nodorum SN15]
Length = 727
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/671 (47%), Positives = 426/671 (63%), Gaps = 41/671 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FL+KA+RE++ALE+R++++ + +RR+E + G + S R R
Sbjct: 60 KPKFLSKAERERIALEKRRKEVEEAQRRREGSNSSTNGASHKGHYDASSSIPTGPRAMRP 119
Query: 74 REEEAKARERARL-----------EKLAERE--RERELELIKEQYLGSKKPKKRV----- 115
+ R +K +R + E +I+++Y+G+++ +
Sbjct: 120 EAPSGPPSRQQRSNGDMAPPPLPDKKTGKRPPPEDAEAAMIRQRYMGAEQNQSTFSAKKK 179
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKE 175
K + + +F+F+W EDTS D N +YQ EA G + + + ++
Sbjct: 180 RKRTTEKKFNFEWNEEEDTSYDYNPIYQQKAEAGFF-----GRGRLGGFTEDVTEQGTQK 234
Query: 176 MREEIRKKEGVEEKPEEAAALKL----KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWR 231
E + +++ V + L + KEE ++D+HWSEKKLE M ERDWR
Sbjct: 235 FIEAMIERDPVSGRERAERILDMERRRKEEGGR------AQLDKHWSEKKLEHMRERDWR 288
Query: 232 IFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
IF+EDFNI+ KG IP PMRNW E L ++LR VE VGY PS +Q AAIP+ LQ RD+
Sbjct: 289 IFKEDFNIATKGGAIPNPMRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDL 348
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
IG+A TGSGKTA+FVLP+L YIS+LPP+ N A+GPYA+V+APTRELAQQIE ET KFA
Sbjct: 349 IGVAVTGSGKTASFVLPLLVYISQLPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFA 408
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
LG IVGG SIEEQ F++R G E+VIATPGRL+DC+ERR VL+QC YV++DEAD
Sbjct: 409 APLGFNTAVIVGGHSIEEQAFQMRDGAEIVIATPGRLVDCIERRMLVLSQCTYVIMDEAD 468
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEELDEKRIYRTTYMFSATMPPAVERLAR 468
RMIDMGFE V +LDA+P +N KP++ ED ++ +YR T M++ATMP AVER+AR
Sbjct: 469 RMIDMGFEEPVNKILDALPVTNEKPDSDAAEDPNAMKRGMYRQTMMYTATMPTAVERIAR 528
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEK-FSRLQRLLDELGDKTA--IVFVNTKK 525
KYLR P +VTIG G+A E + Q V ++ EK RLQ +L+ G+ T IVFVN K+
Sbjct: 529 KYLRRPAIVTIGNVGEAVETVEQRVEHIQGEEKRKKRLQEILNS-GEFTPPIIVFVNIKR 587
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
N D +A+++ +G+ TLHG K+QEQRE +L R R +VLVATD+AGRGIDI DV+
Sbjct: 588 NCDAIARDIKNMGFSSVTLHGSKTQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSL 647
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPEL 644
V+N++M +IE YTHRIGRTGRAGK+GVA TF D DV YDLKQML +S S VP +L
Sbjct: 648 VVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLYDLKQMLTKSQISKVPEDL 707
Query: 645 AKHEASKFKPG 655
KHEA++ K G
Sbjct: 708 RKHEAAQQKGG 718
>gi|241245627|ref|XP_002402509.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496358|gb|EEC05998.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 773
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/679 (47%), Positives = 444/679 (65%), Gaps = 40/679 (5%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRD-RERERHRR 72
KP+FLTK QRE A++RRQE+I Q++RQE++++ Q ++S+ R RE+ R
Sbjct: 113 KPVFLTKEQREAEAIKRRQEEIQGQRQRQEEERKKRQQFFEQAKHSTGKRAIREKRERER 172
Query: 73 EREEEAKARERARLEKLAE-RERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENT 131
ERE + + +K+ E +++E+E E IKE+YLG K K+RV + +++ +F FDW+ +
Sbjct: 173 ERERFREDEDEDDRDKVREHKDKEKEFEAIKERYLGIIKKKRRVRRLNDR-KFVFDWDAS 231
Query: 132 EDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
EDT+ D N +Y++ H Q +GRG G+D + QKK +K E+ E R + EK +
Sbjct: 232 EDTAVDYNPIYKDKHTVQF-YGRGHIGGIDLKAQKKEQSKFYGELLERRRTQA---EKDQ 287
Query: 192 EAAALKL--KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRP 249
E LK ++E +D DRHWS K LEEM ERDWRIFREDFNI+ KG +IP P
Sbjct: 288 EVLRLKKVKRKEEKQKWD------DRHWSHKSLEEMQERDWRIFREDFNITIKGGRIPNP 341
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
+R W E L +L ++ +GYK+ +++A + + +Q + ++ T + FV
Sbjct: 342 LRKWNESPLPSSILDIIKELGYKHDYSLRLAFV-VTQKQTSIHPLSRTDADDELFFV--- 397
Query: 310 LTYISRLPPISE---------ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
Y RL I + E+ +GPYA++MAPTRELAQQIEEET+KFA L I+ V+
Sbjct: 398 --YRPRLERIQKRSFARTSHLEDADQGPYAIIMAPTRELAQQIEEETIKFAKMLEIRTVA 455
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S EEQGFR+R GCE+VIATPGRLID LE RY VL++C Y+VLDEADRMIDMGFE
Sbjct: 456 VIGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEG 515
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLR 472
+V +LD MP +N KP+ E+ E +EK + YR T MF+ATMPPAVERLAR YLR
Sbjct: 516 EVQKILDFMPVTNQKPDTEEAEDEEKLLANFASKHKYRQTVMFTATMPPAVERLARSYLR 575
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAK 532
P +V IG+ GK E Q V ++ ESEK +L LL+ + I+FVN KK AD++AK
Sbjct: 576 RPAIVYIGSIGKPVERTEQVVHLVTESEKRRKLVELLNRGVEPPVIIFVNQKKGADVLAK 635
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
L+K+G+ TLHGGK QEQRE +L + ++LVATDVAGRGIDI +V+ VINYDM
Sbjct: 636 GLEKMGFNACTLHGGKGQEQREYALASLKNGAKDILVATDVAGRGIDIRNVSMVINYDMA 695
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+IE YTHRIGRTGRAG TG A +F+T D+ +FYDLKQ+++ S S PPELA H ++
Sbjct: 696 KSIEDYTHRIGRTGRAGLTGKAVSFVTKEDSHLFYDLKQLIMSSPVSTCPPELANHPDAQ 755
Query: 652 FKPGTIPDRPPRRNDTVFA 670
KPGT+ + RR + +FA
Sbjct: 756 HKPGTVVTK-KRREEKIFA 773
>gi|119179097|ref|XP_001241172.1| hypothetical protein CIMG_08335 [Coccidioides immitis RS]
Length = 817
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 297/575 (51%), Positives = 387/575 (67%), Gaps = 30/575 (5%)
Query: 100 LIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
L +++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN E FGR
Sbjct: 229 LTRQRYMGADQTSSFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSEMNF-FGR 286
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG A + K + E R E + E ++ + + D+
Sbjct: 287 GRLAGFSDDVVDSAAKRYAKAL--EDRDLEAGSARAREILEMERRRREEGGRNGLDL--- 341
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+K+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+P
Sbjct: 342 -HWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDP 400
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVV 332
SPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA++
Sbjct: 401 SPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAII 460
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KF + LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+
Sbjct: 461 LAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCI 520
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LD 444
ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E L
Sbjct: 521 ERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLG 580
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R
Sbjct: 581 GKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--R 638
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L
Sbjct: 639 KKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 698
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 699 RNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGN 758
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 759 EDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 793
>gi|361128429|gb|EHL00364.1| putative Pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Glarea
lozoyensis 74030]
Length = 728
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 315/659 (47%), Positives = 403/659 (61%), Gaps = 80/659 (12%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FL+KA RE+LALE+R +++ + KR+
Sbjct: 103 KPKFLSKAAREKLALEKRAKEVEEAKRK-------------------------------- 130
Query: 74 REEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTED 133
AE RE + E + KK+ + +EK +F+F+W ED
Sbjct: 131 ----------------AEAARESVVPHANETNQSTFSAKKKRRRTTEK-KFNFEWNVEED 173
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N LY EA +GRG G + K K + EE+ EA
Sbjct: 174 TSPDYNPLYSARAEANF-YGRGRLGGFAEDAGESGVLKYAKAL----------EERDGEA 222
Query: 194 AALKLKE----EAADLYD-TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
A + KE E D T +D+HWSEKKLE M ERDWRIF+EDFNIS KG IP
Sbjct: 223 GAARAKEIIEMERRRKEDQTGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPN 282
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
PMR+W E L LL V +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP
Sbjct: 283 PMRSWQESGLPKRLLDVVAQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLP 342
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
+L YIS LPP++E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+E
Sbjct: 343 LLVYISELPPLNEYTKNDGPYAIILAPTRELAQQIETEAKKFATPLGFTCVSIVGGHSLE 402
Query: 369 EQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDA 428
EQ + +R G E++IATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA
Sbjct: 403 EQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDA 462
Query: 429 MPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
+P SN KP+ +D E L K YR T M++ATMP AVE++A+KYLR P +VTIG
Sbjct: 463 LPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPSAVEKIAKKYLRRPAIVTIG 522
Query: 481 TAGKATELISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDK 536
G+A E + Q + +K R +RL + L + IVFVN K+N D VA+++
Sbjct: 523 NVGEAVETVEQRAEFVSGEDK--RKKRLNEILASREFAPPIIVFVNIKRNCDAVARDIKH 580
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
+G+ TLHG K+QEQRE +L R+ +VLVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 581 MGFSSVTLHGSKTQEQREAALASVRSGGTDVLVATDLAGRGIDVPDVSLVVNFNMSTNIE 640
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YTHRIGRTGRAGK+GVA TFL D DV YDLKQM I+S+ S VP EL KHEA++ KP
Sbjct: 641 SYTHRIGRTGRAGKSGVAITFLGNEDADVLYDLKQMFIKSSISKVPEELRKHEAAQQKP 699
>gi|550331|emb|CAA57418.1| putative RNA helicase [Dictyostelium discoideum]
Length = 566
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 283/566 (50%), Positives = 378/566 (66%), Gaps = 16/566 (2%)
Query: 104 QYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG----FRAG 159
++ G K+ + R EK +F F+W+++EDTS D N LY E Q FG G +
Sbjct: 1 EFRGIKRDENRKKIKGEKGKFVFEWDSSEDTSSDYNTLYTKKLEIQPQFGHGNFGGYEKN 60
Query: 160 MDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSE 219
+ ++ ++ ++L DT HWS+
Sbjct: 61 NNNNGNHYNGNIYNNNNNNNNNNNNNNNINNNNNGSMIGGKQISELPDT-------HWSK 113
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K L+ MT+RDW IF+EDFNIS KG P P+R W E L E+L A+ ++GY+ PSPIQM
Sbjct: 114 KPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQM 173
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
+IP+ L RD++GIAETGSGKT AFV+PML YIS+ P ++++ EA+GPYA+VMAPTREL
Sbjct: 174 QSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTREL 233
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
QQIE+ET FA + G +VVS+VGGQSIE+Q +++ +GCE++IATPGRL DCLE+RY VL
Sbjct: 234 VQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVL 293
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDEELDEKRIYRTTYMF 455
NQCNY+VLDEAD MID+GFEPQV VLDAMPSS LK E+ E +E D IYRTT +F
Sbjct: 294 NQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILF 353
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGD 514
SATMPP VE+L++KYLR P +TIG AGK + I Q V+ +K E++K L +L+ +
Sbjct: 354 SATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIKDGPP 413
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
I+FVN KK+ D++A L++ T LH G+SQEQRE +LEGF+ ++Y VL+AT VA
Sbjct: 414 PPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVA 473
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RGI + V HVIN+D+P NIE YTHRIGRTGRAG G+A++F+T D ++ YDLKQ+L
Sbjct: 474 SRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITDKDVEIMYDLKQILT 533
Query: 635 QSNSPVPPELAKHEASKFKPGTIPDR 660
+N+ VP EL KH +S+ K G+ D
Sbjct: 534 STNNIVPIELLKHPSSQQKHGSSKDH 559
>gi|392866896|gb|EAS29922.2| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coccidioides
immitis RS]
Length = 827
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 297/575 (51%), Positives = 387/575 (67%), Gaps = 30/575 (5%)
Query: 100 LIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
L +++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN E FGR
Sbjct: 239 LTRQRYMGADQTSSFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSEMNF-FGR 296
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG A + K + E R E + E ++ + + D+
Sbjct: 297 GRLAGFSDDVVDSAAKRYAKAL--EDRDLEAGSARAREILEMERRRREEGGRNGLDL--- 351
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+K+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+P
Sbjct: 352 -HWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDP 410
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVV 332
SPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA++
Sbjct: 411 SPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAII 470
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KF + LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+
Sbjct: 471 LAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCI 530
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LD 444
ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E L
Sbjct: 531 ERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLG 590
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R
Sbjct: 591 GKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--R 648
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L
Sbjct: 649 KKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 708
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 709 RNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGN 768
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 769 EDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 803
>gi|442570033|sp|Q1DMX8.2|PRP28_COCIM RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 820
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 297/575 (51%), Positives = 387/575 (67%), Gaps = 30/575 (5%)
Query: 100 LIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
L +++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN E FGR
Sbjct: 232 LTRQRYMGADQTSSFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSEMNF-FGR 289
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG A + K + E R E + E ++ + + D+
Sbjct: 290 GRLAGFSDDVVDSAAKRYAKAL--EDRDLEAGSARAREILEMERRRREEGGRNGLDL--- 344
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+K+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+P
Sbjct: 345 -HWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDP 403
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVV 332
SPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA++
Sbjct: 404 SPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAII 463
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KF + LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+
Sbjct: 464 LAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCI 523
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LD 444
ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E L
Sbjct: 524 ERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLG 583
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R
Sbjct: 584 GKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--R 641
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L
Sbjct: 642 KKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 701
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 702 RNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGN 761
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 762 EDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 796
>gi|449295433|gb|EMC91455.1| hypothetical protein BAUCODRAFT_80305 [Baudoinia compniacensis UAMH
10762]
Length = 776
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 324/698 (46%), Positives = 429/698 (61%), Gaps = 68/698 (9%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLL-----SQPQTHGRNSSDSRDRERE 68
KP FL+K +RE+LALE+R++++A+ ++R Q + S P H S+
Sbjct: 67 KPKFLSKKERERLALEKREKEVAESQQRDATGQNGVPNGHTSAPNGHVNGKSNGYTNGHG 126
Query: 69 RH-------RREREEEAK-----ARER-----------------------ARLEKLAERE 93
H RRER A A R A+ K A E
Sbjct: 127 GHHAPPSGPRRERNANAPPPTGPASMRQTPNKGYDMAPPPPPKPIAIVNGAQTAKKAS-E 185
Query: 94 RERELELIKEQYLG-----SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA 148
+ E E+I+++Y+G S K+ K + + +F+F+W EDTS D N LY E
Sbjct: 186 TDVEAEMIRQRYMGADINVSSFSAKKKRKRTTEKKFNFEWNAEEDTSPDYNPLYAARTEN 245
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
+GRG G + A + K + E R E E+ A L+ E ++
Sbjct: 246 DF-YGRGRLGGFADHKTDDAARQYAKAI--EDRDPEAGRER----ALELLEMERRRREES 298
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
+D+HWSEK+L++M ERDWRIF+EDFNIS KG IP PMR+WAE L LL V+
Sbjct: 299 SRTAIDKHWSEKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLPKRLLDVVDA 358
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
VGY PS +Q AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YIS LP ++E + +GP
Sbjct: 359 VGYAEPSAVQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISELPALNEVTKNDGP 418
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA+++APTRELAQQIE E KFA LG VS+VGG SIEEQ + +R G E++IATPGRL
Sbjct: 419 YAIILAPTRELAQQIELEAKKFATPLGFTCVSLVGGHSIEEQSYNMRDGAEIIIATPGRL 478
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE------ 442
+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ +D E
Sbjct: 479 VDCIERRVLVLSQCCYVIMDEADRMIDLGFEEPVKKILDALPVSNQKPDTDDAENAMVMS 538
Query: 443 --LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
L K YR T M++ATMPPAVER+AR YLR P +VTIG G+A + + Q V + +
Sbjct: 539 QHLGGKDRYRQTMMYTATMPPAVERIARNYLRRPAIVTIGNIGEAVDTVEQRVEFISGED 598
Query: 501 KFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
K R +RL + L + IVFVN K+N D VA+++ K+GY TLHG K+Q+QRE +
Sbjct: 599 K--RKKRLNEILSSREFTPPIIVFVNIKRNCDTVARDIQKMGYSSVTLHGSKTQDQREAA 656
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK GVA T
Sbjct: 657 LASLRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKQGVAIT 716
Query: 617 FLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
FL D+DV YDLKQM+ +S+ S VP EL +HEA++ K
Sbjct: 717 FLGNEDSDVLYDLKQMISKSSISRVPEELRRHEAAQQK 754
>gi|169853351|ref|XP_001833356.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
gi|116505566|gb|EAU88461.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
Length = 748
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 297/580 (51%), Positives = 384/580 (66%), Gaps = 49/580 (8%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT--SRDMNALYQNPHEAQLLF 152
E +L I+ +YLG K K+++ K +++ +F FDW+ +DT M+A+ QN AQ++F
Sbjct: 182 ENDLTAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDAQDDTLAEDSMSAVGQNRQGAQIMF 240
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD-------L 205
GRG AGMD +G P ++ A + AD L
Sbjct: 241 GRGHLAGMD----------------------DGGGSGPRKSGAGSVPGHLADAMERRRAL 278
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
+D DRHW+EK L EM ERDWRIFREDF+IS +G IP P+R+W E + +L
Sbjct: 279 KQGYD---DRHWTEKPLNEMKERDWRIFREDFSISARGGNIPHPLRSWEESDIPQVILDC 335
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ER+GYK PSPIQ AIP+GLQ RDVIGIAETGSGKTAAFV+PML +I LP +++N
Sbjct: 336 IERIGYKEPSPIQRQAIPIGLQNRDVIGIAETGSGKTAAFVIPMLAFILTLPIFTDDNRH 395
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
GPYA+++APTRELAQQIE ET KFA LG K VSIVGG+++EEQ F +R+G E++IATP
Sbjct: 396 LGPYALILAPTRELAQQIESETKKFATPLGYKCVSIVGGRAVEEQQFNLREGAEIIIATP 455
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD- 444
GRL D LER VL+QC Y+V+DEADRM+++GFE + +LD +P+ ++ E + E++D
Sbjct: 456 GRLKDVLERHVLVLSQCRYIVMDEADRMVNLGFEADLTFILDQLPTDTMEGEEQGEKMDV 515
Query: 445 ------EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
+K R T +FSATMPPAVERLARKYL+ P +TIG AG+A + + Q V +
Sbjct: 516 DGETMVKKGRTRVTTLFSATMPPAVERLARKYLKKPATITIGEAGRAVDTVEQKVEFVNG 575
Query: 499 SEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
EK + QR+LD L IVFVN KK ADMVAK+L + G+ +TLH GK+QEQRE
Sbjct: 576 DEK--KKQRMLDILNSGLYAPPIIVFVNQKKTADMVAKDLSRAGWSTSTLHSGKNQEQRE 633
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L+ RT ++LVATD+AGRGID+ DV VINY M IE Y HRIGRTGRAGK G A
Sbjct: 634 AALQALRTGDADILVATDLAGRGIDVQDVTLVINYQMANTIEAYVHRIGRTGRAGKLGTA 693
Query: 615 TTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
TFLT D +V YDLKQ + +S S VPPELAKHEA++ K
Sbjct: 694 ITFLTNDDDEVMYDLKQEISKSPVSKVPPELAKHEAAQHK 733
>gi|426372419|ref|XP_004053121.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Gorilla
gorilla gorilla]
Length = 783
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/675 (47%), Positives = 433/675 (64%), Gaps = 71/675 (10%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQ 365
++P+L +I+ LP I R L L I +S +
Sbjct: 446 LIPLLVWITTLPKID----------------RSLT-------------LCIAFISGKWRR 476
Query: 366 SIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
++ E+ +VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V +
Sbjct: 477 ALYEK-------SAIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKI 529
Query: 426 LDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVV 476
L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P V
Sbjct: 530 LEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAV 589
Query: 477 VTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK 536
V IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+K
Sbjct: 590 VYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEK 649
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE
Sbjct: 650 MGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIE 709
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 655
Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KPG
Sbjct: 710 DYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPG 769
Query: 656 TIPDRPPRRNDTVFA 670
TI + RR +T+FA
Sbjct: 770 TILTK-KRREETIFA 783
>gi|225679862|gb|EEH18146.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Paracoccidioides brasiliensis Pb03]
Length = 615
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 303/584 (51%), Positives = 388/584 (66%), Gaps = 38/584 (6%)
Query: 95 ERELELIKEQYLG-------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E + LI+++Y+G S K K+R + +E+ +F+F+W EDTS D N LYQN
Sbjct: 21 EAQAALIRQRYMGVDQTSNFSAKKKRR--RTTER-KFNFEWNADEDTSPDYNPLYQN-RS 76
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADL 205
FGRG AG E A+N E+ R E + E + + KEE
Sbjct: 77 TTNFFGRGRLAGFGD-EAADAVARNYARALED-RDPEAGSARAREILEMERRRKEEGGR- 133
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
+D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+WAE L LL
Sbjct: 134 -----HALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWAESGLPKRLLSI 188
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--EN 323
+++VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI LP + E
Sbjct: 189 IDKVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIGELPRLDEFEWR 248
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G E++IA
Sbjct: 249 RNDGPYAIILAPTRELAQQIEIEAKKFSTPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIA 308
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE- 442
TPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ED E
Sbjct: 309 TPGRLVDCIERRMIVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVANEKPDTEDAEN 368
Query: 443 -------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
+ K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V
Sbjct: 369 PQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNVGEAVDTVEQRVEF 428
Query: 496 MKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQE 551
+ +K R +RL + L + IVFVN K+N D VA+++ +GY TLHG K+QE
Sbjct: 429 VSGEDK--RKKRLAEILASREFRPPIIVFVNIKRNCDAVARDIKNMGYSSVTLHGSKTQE 486
Query: 552 QREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKT 611
QRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+
Sbjct: 487 QREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKS 546
Query: 612 GVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GVA TFL D+DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 547 GVAITFLGNEDSDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 590
>gi|322706999|gb|EFY98578.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
anisopliae ARSEF 23]
Length = 714
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/675 (46%), Positives = 435/675 (64%), Gaps = 45/675 (6%)
Query: 15 PLFLTKAQREQLALE--------RRQEQIAQQKRRQEQQQQLLSQPQ-----THGRNSSD 61
P F+ KAQRE++A E +R++ + ++R++ +++ S+P +H +
Sbjct: 22 PRFIPKAQRERMAAEQAKREEDDKRRKAADEAQKRRDDERKWESRPNGPSSTSHRIPNGP 81
Query: 62 SRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLG-------SKKPKKR 114
S+ R R+ ++K ++ +K + + E L + +YLG S KK+
Sbjct: 82 SQPPTGPRAMNPRKGDSKKSDKVNGDK--KSAEDIEATLFRSRYLGPEVNQQSSFSAKKK 139
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMNALYQNP--HEAQLLFGRG--FRAGMDRREQKKLAA 170
++ +EK +F+F+W+ +DTSRD + +Y+N + L G G F +RR +K+
Sbjct: 140 RMRTTEK-KFNFEWDLEDDTSRDNDPIYKNQAVNRGGSLAGLGGEFDEEAERRARKRARL 198
Query: 171 KNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDW 230
E+++ + +G+ E A A K KE A + RHWSEKKL EM ERDW
Sbjct: 199 IEERDVENGKERAKGIMEDFYRARA-KAKERAER------TGLGRHWSEKKLGEMRERDW 251
Query: 231 RIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRD 290
RIF+EDF IS KG IP PMR+W E L LL V+RVGYK P+PIQ AAIP+ LQ RD
Sbjct: 252 RIFKEDFGISTKGGAIPDPMRSWEESGLPQRLLDIVDRVGYKEPTPIQRAAIPIALQARD 311
Query: 291 VIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKF 350
+IG+A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KF
Sbjct: 312 LIGVAVTGSGKTAAFLLPLLVYISDLPPLTEVNKNDGPYALILAPTRELVQQIETEAKKF 371
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
A LG + VSIVGG S+EEQ F +R G E+++ATPGRL+DC+ERR VL+QC Y+++DEA
Sbjct: 372 AEPLGFRCVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCIERRLLVLSQCCYIIMDEA 431
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPA 462
DRMID+GFE V +LDA+P SN KP+ +D E L + YR T M++ATMPP
Sbjct: 432 DRMIDLGFEESVNKILDALPVSNEKPDTDDAENAQLMKSYLGSRDKYRQTMMYTATMPPL 491
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELG-DKTAIVF 520
VER+A+KYLR P TIG AG+A + + Q V + E + RLQ +L + IVF
Sbjct: 492 VERIAKKYLRRPATATIGNAGEAVDTVEQRVEFISGEDRRKKRLQEILSKNDFAPPIIVF 551
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
VN K+N D VA+++ +G+ TLHG K+QEQRE +L R+ VLVATD+AGRGID+
Sbjct: 552 VNIKRNCDAVARDIKSMGWSTVTLHGSKTQEQREAALASVRSGATQVLVATDLAGRGIDV 611
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SP 639
PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL D DV YDL+QML +S+ S
Sbjct: 612 PDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLRQMLSKSSISK 671
Query: 640 VPPELAKHEASKFKP 654
VP EL +HEA++ KP
Sbjct: 672 VPEELKRHEAAQSKP 686
>gi|320033151|gb|EFW15100.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coccidioides
posadasii str. Silveira]
Length = 820
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 296/575 (51%), Positives = 386/575 (67%), Gaps = 30/575 (5%)
Query: 100 LIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
L +++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN E FGR
Sbjct: 232 LTRQRYMGADQTSSFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSEMNF-FGR 289
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG A + K + E R E + E ++ + + D+
Sbjct: 290 GRLAGFSDDVVDSAAKRYAKAL--EDRDLEAGSARAREILEMERRRREEGGRNGLDL--- 344
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+K+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+P
Sbjct: 345 -HWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDP 403
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVV 332
SPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA++
Sbjct: 404 SPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAII 463
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KF + LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+
Sbjct: 464 LAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCI 523
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LD 444
ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E L
Sbjct: 524 ERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLG 583
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R
Sbjct: 584 GKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--R 641
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L
Sbjct: 642 KKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 701
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+ DV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 702 RNGNTDVLVATDLAGRGIDVSDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGN 761
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 762 EDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 796
>gi|303320765|ref|XP_003070377.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240110073|gb|EER28232.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 827
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 296/575 (51%), Positives = 386/575 (67%), Gaps = 30/575 (5%)
Query: 100 LIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
L +++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN E FGR
Sbjct: 239 LTRQRYMGADQTSSFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSEMNF-FGR 296
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG A + K + E R E + E ++ + + D+
Sbjct: 297 GRLAGFSDDVVDSAAKRYAKAL--EDRDLEAGSARAREILEMERRRREEGGRNGLDL--- 351
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+K+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+P
Sbjct: 352 -HWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDP 410
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVV 332
SPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA++
Sbjct: 411 SPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAII 470
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KF + LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+
Sbjct: 471 LAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCI 530
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LD 444
ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E L
Sbjct: 531 ERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLG 590
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R
Sbjct: 591 GKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--R 648
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L
Sbjct: 649 KKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 708
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+ DV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 709 RNGNTDVLVATDLAGRGIDVSDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGN 768
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 769 EDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 803
>gi|393220338|gb|EJD05824.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 740
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/574 (50%), Positives = 381/574 (66%), Gaps = 46/574 (8%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN--ALYQNPHEAQLLF 152
+ +L I+ +YLG K K+++ K +++ +F FDW+ +DT + + A N AQ++F
Sbjct: 179 DNDLSAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQDDTLAEDSPTAAGANRQGAQVMF 237
Query: 153 GRGFRAGMD-----RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYD 207
GRG AGMD RR K + K G++E
Sbjct: 238 GRGHLAGMDDGGGVRRGSGNAETKFSDTLERRKAAKSGLDE------------------- 278
Query: 208 TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
RHW+EK L +M +RDWRIFREDF+I+ +G +IP P+R+W E ++ P +L VE
Sbjct: 279 -------RHWTEKPLSQMKDRDWRIFREDFSIATRGGQIPHPLRSWTESEIPPTILEVVE 331
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
+VGYK PS IQ AIP+GLQ RD+IGIAETGSGKTAAFV+PMLTYIS LPP +E+N G
Sbjct: 332 KVGYKEPSAIQRQAIPIGLQNRDLIGIAETGSGKTAAFVIPMLTYISNLPPFTEDNRHLG 391
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
PYA+++APTRELAQQIE ET KFA LG K VSIVGG+S+EEQ F +R+G E++IATPGR
Sbjct: 392 PYALILAPTRELAQQIESETRKFASPLGFKCVSIVGGRSVEEQQFNLREGAEIIIATPGR 451
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE-----DEE 442
L D +ER VL+QC+Y+V+DEADRM+++GFE + +LD +PS LK E+E D E
Sbjct: 452 LKDVIERHVIVLSQCSYIVMDEADRMVNLGFEVDLTFILDKLPSEMLKGEDEGMMDVDGE 511
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
+ + R T +FSATMPPAVERL RKYL+ P +VTIG AG+A + + Q V + EK
Sbjct: 512 MVRRGRTRVTTLFSATMPPAVERLTRKYLKKPAIVTIGEAGRAVDTVEQRVEFINGDEK- 570
Query: 503 SRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
+ QR+++ L IVFVN KK ADMV +++ + G R TTLH GK+QEQRE +L+
Sbjct: 571 -KRQRMIEILSKDGFPAPIIVFVNQKKTADMVCRDVQRAGVRATTLHSGKNQEQREAALQ 629
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
R +VLVATD+AGRGID+ DV+ V+NY M IE Y HRIGRTGRAGK G A TFL
Sbjct: 630 SLRNGESDVLVATDLAGRGIDVQDVSLVLNYQMANTIEAYVHRIGRTGRAGKVGTAITFL 689
Query: 619 TFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
T D +V YDL+Q + +S S VPPELAKHEAS+
Sbjct: 690 TNDDDEVMYDLRQEISKSPVSKVPPELAKHEASQ 723
>gi|406860526|gb|EKD13584.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 839
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/710 (45%), Positives = 430/710 (60%), Gaps = 81/710 (11%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLL----SQP-QTHGRNSSDSRDRERE 68
+P FL+KA+RE++ALE+R++++ + +R++ + + + S P Q +GR+S++ R+
Sbjct: 116 QPKFLSKAEREKIALEKREKEVEEARRKKGAEARGVMFVESGPAQRNGRDSAEYAANGRD 175
Query: 69 RH---------------------RREREEEAKARERARLEK------------------L 89
R R A ER ++ L
Sbjct: 176 RSSVPTGPRAMRYEDPPSGPFAGRNNHSGRAAGGERQSGDRGGGHNAPTKAAPVVKNVHL 235
Query: 90 AERERERELE-----LIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDM 138
A +R E LI+ +Y+G++ K+ + +EK +F+F+W EDTS D
Sbjct: 236 AGEKRPANGESTQAALIRTRYMGAETNLSTFSANKKRRRTTEK-KFNFEWNAEEDTSPDY 294
Query: 139 NALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL-- 196
N +Y EA FGRG G + K K + E R E + E +
Sbjct: 295 NPIYSTRSEANF-FGRGRLGGFAEDINESGVIKYAKAL--EARDAEAGTARAREIMEMER 351
Query: 197 KLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEG 256
+ KE+A +++HWSEKKLE M ERDWRIF+EDFNIS KG IP PMRNW E
Sbjct: 352 RRKEDAGGRNS-----LEKHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRNWGES 406
Query: 257 KLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRL 316
L LL V +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS L
Sbjct: 407 GLPKRLLDVVAQVGYDQPSAVQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISEL 466
Query: 317 PPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQ 376
P +++ + +GPYA+++APTRELAQQIE E KFA LG VSIVGG ++EEQ + +R
Sbjct: 467 PQLNDLTKNDGPYAIILAPTRELAQQIETEAKKFATPLGFTCVSIVGGHALEEQSYNLRN 526
Query: 377 GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP 436
G E+VIATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP
Sbjct: 527 GAEIVIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEDSVNKILDALPVSNEKP 586
Query: 437 ENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL 488
+ ED E + K YR T M++ATMP AVE++A+KYLR P +VTIG G+A E
Sbjct: 587 DTEDAEDAQAMSQHIGGKDRYRQTMMYTATMPSAVEKIAKKYLRRPAIVTIGNIGEAVET 646
Query: 489 ISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
+ Q V + +K R +RL + L IVFVN K+N D VA+++ +G+ TL
Sbjct: 647 VEQRVEFVSGEDK--RKKRLNEILASGEFRPPIIVFVNIKRNCDAVARDIKHMGFSSVTL 704
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HG K+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE YTHR+GR
Sbjct: 705 HGSKTQEQREAALASIRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRVGR 764
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
TGRAG +GVA TFL D DV YDLKQML +S+ S VP EL KHEA++ K
Sbjct: 765 TGRAGNSGVAITFLGNEDADVMYDLKQMLTKSSISRVPEELRKHEAAQQK 814
>gi|154324248|ref|XP_001561438.1| hypothetical protein BC1G_00523 [Botryotinia fuckeliana B05.10]
gi|160419159|sp|A6RJA2.1|PRP28_BOTFB RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
Length = 783
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 422/689 (61%), Gaps = 84/689 (12%)
Query: 17 FLTKAQREQLALERRQEQIAQQKRRQE-QQQQLLSQPQTHGR--------NSSDSRDR-- 65
FL+KA RE+LALE R +++ +QKR++E +Q +S +G N D +R
Sbjct: 104 FLSKAAREKLALETRAKEVEEQKRKREAEQDNRISIGSVNGNGNGYGSAANGPDGYERSY 163
Query: 66 ERERHRRER---------------------------------EEEAKARERARL--EKLA 90
++E RRE + A +A + EK
Sbjct: 164 QQENGRRESSFVPTGPRAMRNSQQSRSSSDKPNDMEPPPKPAKSAAAGTGKASVAGEKRP 223
Query: 91 ERERERELELIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
+ + LIK +Y+G++ KK+ + +EK +F+F+W EDTS D N +YQN
Sbjct: 224 ANAEDLQAALIKTRYMGAETNQSTFSAKKKRRRTTEK-KFNFEWNAEEDTSPDYNPIYQN 282
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE---- 200
EA + R + A++E ++ + +EE+ EA + +E
Sbjct: 283 RAEAG----------LYGRGRLGGFAEDEGAT---LKYAKALEERDAEAGGARAREIVEM 329
Query: 201 EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP 260
E D +D+HWSEKKLE M ERDWRIF+EDFNIS KG IP PMRNW+E KL
Sbjct: 330 ERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNWSESKLPK 389
Query: 261 ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS 320
LL + +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP++
Sbjct: 390 RLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLN 449
Query: 321 EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEV 380
E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+EEQ + +R G E+
Sbjct: 450 EFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEI 509
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
+IATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP+ +D
Sbjct: 510 IIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDD 569
Query: 441 EE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQH 492
E L K YR T M++ATMPPAVE++A+KYLR P +VTIG G+A E + Q
Sbjct: 570 AEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQR 629
Query: 493 VVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
V + +K R +RL + L IVFVN K+N D VA+++ +G+ TLHG K
Sbjct: 630 VEFVAGEDK--RKKRLNEILASGEFAPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSK 687
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRA
Sbjct: 688 TQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRA 747
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
GK+GVA TFL D+D YDLKQML +S+
Sbjct: 748 GKSGVAITFLGNEDSDTMYDLKQMLTKSS 776
>gi|328859802|gb|EGG08910.1| hypothetical protein MELLADRAFT_34708 [Melampsora larici-populina
98AG31]
Length = 765
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/691 (45%), Positives = 415/691 (60%), Gaps = 62/691 (8%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRR------QEQQQQLLSQPQTHGRNSSDSRDRER 67
KP FL+K +R LA+E+R +++A +K R + + + ++ +G S+D+ D
Sbjct: 50 KPKFLSKEERATLAIEKRAQEVAAEKARLAEAAAKRDELERSARESKYGSYSTDATDSSS 109
Query: 68 ERHRREREEEAKARERARLEKLAEREREREL-----------------ELIKEQYLGSKK 110
+ A L + + L +L+ +YLG
Sbjct: 110 TSNNAASNSMPPPNFPAS-ASLPDMKGNSVLPNNGPMLGTAPPPALNQKLLMARYLGQPD 168
Query: 111 PKKRVIKPSEKFRFSFDWENTEDTSRD----MNALYQNPHEAQL-----LFGRGFRAGMD 161
KKR I+ +F FDW EDT+ + + A+ P A + L+G G AG+D
Sbjct: 169 NKKRRIRKMSDKKFVFDWAKDEDTALEEVDPLYAVTAPPISAPIVGRFGLYGNGKLAGID 228
Query: 162 RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK 221
Q + +N + R E + K +A + + HWS+K
Sbjct: 229 PAAQ---SVRNHSRTTYQTRYNPDDEVLTSTPMSTGSKRSSAVINEL-------HWSQKP 278
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
LE M ERDWRIFREDF+I+ +G IP PMR+W E K+ ++L ++ VGYK PSPIQ A
Sbjct: 279 LEAMRERDWRIFREDFSIAARGGNIPNPMRSWDESKIPMQILEIIDEVGYKEPSPIQRQA 338
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IPLGL RD+IGIAETGSGKTA+FV+PMLTYI +L P+++EN GPYA+++APTRELAQ
Sbjct: 339 IPLGLNNRDLIGIAETGSGKTASFVIPMLTYIGKLAPLTDENRHLGPYALILAPTRELAQ 398
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QIE ET KFA LG + VSIVGG+++EEQ +R G E++IATPGRL DC+ER VL Q
Sbjct: 399 QIESETNKFALRLGYRCVSIVGGKAMEEQALNMRDGAEIIIATPGRLKDCIERHVLVLGQ 458
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR-------------- 447
C YVV+DEADRMI++GFE V +LD +P SNLKP+ E+ E K
Sbjct: 459 CTYVVMDEADRMINLGFEEVVNFILDQLPLSNLKPDTEEAEDSAKMTSFIGGIEGFDVSG 518
Query: 448 ---IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM-KESEKFS 503
+YR T MFSATMPPAVERLARKYLR P VVTIG AG+A + + Q V + E +K
Sbjct: 519 IKGLYRQTVMFSATMPPAVERLARKYLRRPAVVTIGVAGQAVDTVDQQVEFLPNEDKKRG 578
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
RL +L++ IVFVN KK AD +AK++ + G+ TTLH GK+QEQRE +L R
Sbjct: 579 RLLEVLNQGHTPPIIVFVNQKKTADQLAKDISRAGWSTTTLHSGKNQEQREAALASLRAG 638
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
++LVATD+AGRGID+P+V+ V+N+ M G IE Y HRIGRTGRAGK G A TFLT D
Sbjct: 639 ESDILVATDLAGRGIDVPNVSLVVNFQMAGTIEAYVHRIGRTGRAGKVGTAITFLTNDDA 698
Query: 624 DVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
DV YDLKQ + +S S PPELAKHEA++ K
Sbjct: 699 DVLYDLKQEITKSPVSRCPPELAKHEAAQSK 729
>gi|440635116|gb|ELR05035.1| hypothetical protein GMDG_01606 [Geomyces destructans 20631-21]
Length = 810
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/709 (44%), Positives = 428/709 (60%), Gaps = 89/709 (12%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLL------------------------ 49
KP FL++AQRE+LALE+R++++ +Q+R+ E ++Q +
Sbjct: 99 KPKFLSRAQREKLALEKREKEVEEQRRKTEAERQPIAAAPRQVPNGSGGSDRRRDDDRRG 158
Query: 50 ---------------SQPQT--HGRNSSDSRDRERERHRREREEEAKARERARLEKLAER 92
+ P T GRN ++ R ++ +++ + EK
Sbjct: 159 PSNVPTGPRSMRHGDTAPPTGLSGRNGNNGR-QQGNMGPPDKQSANSGKGSLAGEKRPAN 217
Query: 93 ERERELELIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPH 146
E L + +Y+G++ K+ + +EK +F+F+W EDTS D N +Y
Sbjct: 218 GESTEAALTRVRYMGAEVNQSTFSANKKRRRTTEK-KFNFEWNAEEDTSPDYNPIYAQRA 276
Query: 147 EAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE------ 200
E FGRG G + + ++ + +EE+ EA + + +E
Sbjct: 277 EVNF-FGRGRLGGFAEDPESGV-----------LKYAKALEERDSEAGSARARELLEMER 324
Query: 201 ---EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
E A ++ D +HWSEKKLE M ERDWRIF+EDFNIS KG IP PMRNW E
Sbjct: 325 RRREDAGGRNSLD----KHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNWGESG 380
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L L+ + VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 381 LPKRLMDVIAMVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELP 440
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
++E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+EEQ + +R G
Sbjct: 441 VLNEFTKNDGPYAIILAPTRELAQQIEAEAKKFATPLGFTCVSIVGGHSLEEQAYNLRNG 500
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E++IATPGRL+DC+ERR VL QC YV++DEADRMID+GFE V +LDA+P N KP+
Sbjct: 501 AEIIIATPGRLVDCIERRLLVLGQCCYVIMDEADRMIDLGFEESVNKILDALPVGNEKPD 560
Query: 438 NEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
E+ E L K YR T M++ATMP AVE++A+KYLR P +VTIG G+A E +
Sbjct: 561 TEEAEDPQAMTQHLGGKDRYRQTMMYTATMPSAVEKIAKKYLRRPAIVTIGNVGEAVETV 620
Query: 490 SQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
Q V + +K R +RL + L IVFVN K+N D VA+++ +G+ TLH
Sbjct: 621 EQRVEFVSGEDK--RKKRLNEILASGEFAPPIIVFVNIKRNCDAVARDIKHMGFTSVTLH 678
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
G K+QEQRE +L R+ + +VLVATD+AGRGID+PDV+ V+N++M NIE YTHR+GRT
Sbjct: 679 GSKTQEQREAALASVRSGQTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRVGRT 738
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
GRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHE+++ K
Sbjct: 739 GRAGKSGVAITFLGNEDADVMYDLKQMLMKSSISRVPEELRKHESAQQK 787
>gi|429848159|gb|ELA23673.1| pre-mRNA-splicing atp-dependent rna helicase prp28 [Colletotrichum
gloeosporioides Nara gc5]
Length = 713
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 297/582 (51%), Positives = 389/582 (66%), Gaps = 36/582 (6%)
Query: 97 ELELIKEQYLGSK--KPKKRVIKPSEK--FRFSFDWENTEDTSRDMNALYQNPHEAQLLF 152
E EL++ +YLG + K K +K K F FDW+ EDT+RD + LY++ A +
Sbjct: 137 EAELLRNRYLGPEVNKESKFSVKKKRKRAAEFKFDWDAEEDTTRDDDPLYES-SLALKSY 195
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDM- 211
G AG E + +A K +E+ E + +E D Y D
Sbjct: 196 TFGSLAGEFNAEAESIALARAKR----------IEQTDAENGKRRAQEFMDDFYKARDRA 245
Query: 212 --RVDR-----HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
R DR HWS+K L+EM ERDWRIF+EDF I+ KG IP PMR+W E L LL
Sbjct: 246 KERADRTGLTKHWSKKALDEMRERDWRIFKEDFGIATKGGLIPNPMRSWQESGLPRRLLN 305
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+++VGY PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP++E N
Sbjct: 306 IIDQVGYTEPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLTEVNR 365
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GPYA+++APTREL QQIE E KFA LG +VVSIVGG S+EEQ F +R G E+++AT
Sbjct: 366 NDGPYALILAPTRELVQQIETEAKKFAGPLGFRVVSIVGGHSLEEQAFALRNGAEIIVAT 425
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 442
PGRL+DC+ERR VL+QC Y+++DEADRMID+GFE V +LDA+P +N KP+ E+ E
Sbjct: 426 PGRLVDCIERRLLVLSQCCYIIMDEADRMIDLGFEESVNKILDALPVTNEKPDTEEAENA 485
Query: 443 ------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
L K YR T M++ATMPP VE++A+KYLR P +VTIG AG+A + + Q V +
Sbjct: 486 AIMKRYLGGKDRYRQTMMYTATMPPLVEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFV 545
Query: 497 K-ESEKFSRLQRLL--DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
E ++ RLQ +L +E IVFVN K+N D VA+++ +GY TLHG K+QEQR
Sbjct: 546 SGEDKRKKRLQEILASNEYAPPI-IVFVNIKRNCDAVARDVKHMGYSAVTLHGSKTQEQR 604
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
E +L R + +VLVATD+AGRGID+PDV+ VIN++MP +IE YTHRIGRTGRAGK+GV
Sbjct: 605 EAALASVRAGQTDVLVATDLAGRGIDVPDVSLVINFNMPSSIEAYTHRIGRTGRAGKSGV 664
Query: 614 ATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
A TFL DTD++YDLKQML +S+ S VP EL +HEA++ +P
Sbjct: 665 AITFLGNEDTDLYYDLKQMLSKSSLSRVPEELRRHEAAQSRP 706
>gi|399219035|emb|CCF75922.1| unnamed protein product [Babesia microti strain RI]
Length = 635
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 289/567 (50%), Positives = 381/567 (67%), Gaps = 28/567 (4%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHEAQLLFG 153
EL I++ YLG+KK K+V+KPSEKF F F+W+ ++DT++ D+N LY HE++LL
Sbjct: 82 ELNQIRDYYLGTKKEAKKVLKPSEKFHTVFHFEWDESDDTTKTDVNPLYMKRHESKLLLE 141
Query: 154 RGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRV 213
R FR +D + K + ++ + + E + ++ K K+ AD
Sbjct: 142 RRFRGSVD-----IVGQKGRSDYKDLAKYRNDDECDVDYHSSFKKKKRNAD--------- 187
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
+HW EK +EM +RDW IFRED++I KG +IP PMR+W E KL ELL AV+ GY
Sbjct: 188 -KHWREKCRDEMNDRDWMIFREDYSICVKGGRIPPPMRSWDESKLPKELLEAVKVAGYNK 246
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQM AIP+ L+ RD+IGIAETGSGKTAAFVLPML Y+ LP + +E +GPY++V+
Sbjct: 247 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKSLPLLDDETGQDGPYSLVL 306
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
AP+RELA QI +ET KFA Y + + IVGG+S+E Q F +R+G E++I TPGR+ DCL+
Sbjct: 307 APSRELAIQIYDETRKFAAYCECRAIVIVGGRSVESQAFELRRGTEIIIGTPGRIKDCLD 366
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED----EELDEK--- 446
R Y VLNQCNYV+LDEADRM+DMGFE V +LD +PS+NLK E+ED +EL K
Sbjct: 367 RAYIVLNQCNYVILDEADRMVDMGFEEVVNDILDKIPSTNLKAEDEDTAYEQELMSKAGH 426
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
R YR T MFSATM +++RL +KYLR P V+IG G + I Q + + E +K RL
Sbjct: 427 RRYRITQMFSATM--SIDRLMKKYLRAPAFVSIGDVGVGKKSIEQVLEFVTEGKKKVRLD 484
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
LL ++FVN KK AD +AK + + Y +LHGGK QE REI+LE F+ R +
Sbjct: 485 ALL-STTKSPIMIFVNQKKQADALAKTISNMNYSAISLHGGKLQENREIALESFKAGRVD 543
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+LVATDVAGRGID+ V VINYDMP +IE Y HRIGRTGRAGK G+A +F+T D+ +F
Sbjct: 544 ILVATDVAGRGIDVEGVNTVINYDMPKDIESYIHRIGRTGRAGKKGLAISFVTEDDSHLF 603
Query: 627 YDLKQMLIQSNSPVPPELAKHEASKFK 653
YDLKQ LI S + VP EL++H ASK K
Sbjct: 604 YDLKQQLISSGNVVPNELSRHPASKQK 630
>gi|340519980|gb|EGR50217.1| predicted protein [Trichoderma reesei QM6a]
Length = 722
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 301/589 (51%), Positives = 386/589 (65%), Gaps = 48/589 (8%)
Query: 97 ELELIKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ 149
E L++ +YLG + KK+ ++ +EK +F+F+W+ EDTSRD + LY +Q
Sbjct: 125 EDSLLRSRYLGPEVNQQSTFSAKKKRMRTTEK-KFNFEWDADEDTSRDNDPLYA----SQ 179
Query: 150 LLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTF 209
+ G AG+ K E E R R K E PE +E A + + F
Sbjct: 180 SVNRGGSLAGLGGEFDK------EAEQRARKRAKMIEERDPEHG-----RERAIGIMEDF 228
Query: 210 ------------DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
+ RHWSEK L EM ERDWRIF+EDF IS KG IP PMRNW E
Sbjct: 229 YRARDRARERAERTGLGRHWSEKALSEMRERDWRIFKEDFGISTKGGAIPNPMRNWEESG 288
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL V+RVGYK PS IQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 289 LPRRLLDIVDRVGYKEPSAIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLP 348
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P++E N+ +GPYA+++APTREL QQIE E KFA LG + VSIVGG S+EEQ F +R G
Sbjct: 349 PLTEANKNDGPYALIIAPTRELVQQIETEAKKFAEPLGFRCVSIVGGHSLEEQAFALRNG 408
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E+++ATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP+
Sbjct: 409 AEIIVATPGRLVDCIERRLLVLVQCCYIIMDEADRMIDLGFEDSVNKILDALPVSNEKPD 468
Query: 438 NEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
+D E + K YR T M++ATMPP VE++A+KYLR P +VTIG AG+A + +
Sbjct: 469 TDDAENAQLMKRYVGGKDRYRQTMMYTATMPPQVEKIAKKYLRRPAIVTIGNAGEAVDTV 528
Query: 490 SQHV-VMMKESEKFSRLQRLLDELGD--KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
Q V + E + RLQ +L G IVFVN K+N D VA+++ +G+ V TLHG
Sbjct: 529 EQRVEFVAGEDRRKKRLQEILSS-GQFAPPIIVFVNIKRNCDAVARDIKAMGWSVVTLHG 587
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
K+QEQRE +L R+ + VLVATD+AGRGID+PDV+ VIN++M NIE YTHRIGRTG
Sbjct: 588 SKTQEQREAALASVRSGQTQVLVATDLAGRGIDVPDVSLVINFNMATNIESYTHRIGRTG 647
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
RAGK+GVA TFL D DV YDLKQML +S+ S VP EL +HEA++ +P
Sbjct: 648 RAGKSGVAITFLGNEDADVLYDLKQMLSKSSISKVPDELKRHEAAQSRP 696
>gi|302915827|ref|XP_003051724.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732663|gb|EEU46011.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 714
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 317/692 (45%), Positives = 430/692 (62%), Gaps = 73/692 (10%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQ--------KRRQEQQQQLLSQPQTHGRNSSDSRDRE 66
P F+ KAQRE+LA E+ +++ + +RR+E +Q+ ++P S++ +
Sbjct: 22 PRFIPKAQRERLAAEKAKKEEEDKKRKAAEDAQRRREDEQKWAARPNGSSSTPSEATNGS 81
Query: 67 RER-----------HRREREEEAKARERARLEK-LAERERERELELIKEQYLGSK----- 109
R + R R E K ++A +K LAE + E L++ +YLG +
Sbjct: 82 SSRVPTGPKAMNQENGRGRGREGKKGDKANADKRLAE---DIEASLLRSRYLGPEVNQQS 138
Query: 110 --KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK 167
KK+ ++ +E+ +F+F+W+ EDTSRD + LY Q G AG
Sbjct: 139 NFSAKKKRMRTTER-KFNFEWDADEDTSRDNDPLYTR----QSANHNGSFAG-------- 185
Query: 168 LAAKNEKEMREEIRKKEGVEEK--PEEAAALKLKEEAADLYDTF------------DMRV 213
+ + ++E E RK+ + E+ PE KE A + F +
Sbjct: 186 VGGEFDEEAEERARKRARMIEQRDPENG-----KERAKGFMEDFFRARDRARERADRTGL 240
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
+ W+EK L+EM ERDWRIF+EDF I+ KG IP PMRNW E L P LL V++VGYK
Sbjct: 241 GKRWTEKSLDEMRERDWRIFKEDFGIATKGGMIPNPMRNWRESNLPPRLLSVVDQVGYKE 300
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP+ + N+ +GPYA+++
Sbjct: 301 PTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLEDHNKNDGPYALIL 360
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTREL QQIE E KFA LG + VSIVGG S+EEQ + +R G E+++ATPGRL+DC+E
Sbjct: 361 APTRELVQQIETEAKKFAEPLGFRCVSIVGGHSLEEQAYALRNGAEIIVATPGRLVDCIE 420
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDE 445
RR VL QC YV++DEADRMID+GFE V +LDA+P SN KP+ +D E L
Sbjct: 421 RRLLVLGQCCYVIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAENAQLMKRYLGG 480
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSR 504
YR T M++ATMPP VE++A+KYLR P VVTIG AG+A + + Q V + E + R
Sbjct: 481 NDRYRQTMMYTATMPPVVEKIAKKYLRRPAVVTIGNAGEAVDTVEQRVEFVSGEDRRKKR 540
Query: 505 LQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
LQ +L E IVFVN K+N D VA+++ +G+ TLHG K+QEQRE +L R
Sbjct: 541 LQEILSSEAFAPPIIVFVNIKRNCDAVARDIKAMGWSAVTLHGSKTQEQREAALASVRAG 600
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL D
Sbjct: 601 HTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDA 660
Query: 624 DVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D YDLKQ+L +S+ S VP EL +HEA++ +P
Sbjct: 661 DNMYDLKQILSKSSISKVPEELRRHEAAQSRP 692
>gi|342890185|gb|EGU89049.1| hypothetical protein FOXB_00461 [Fusarium oxysporum Fo5176]
Length = 723
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 319/695 (45%), Positives = 432/695 (62%), Gaps = 69/695 (9%)
Query: 15 PLFLTKAQREQLALE----------RRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRD 64
P F+ KA+RE+LA E R+ + AQ++R +EQ+ S + +S++
Sbjct: 22 PRFIPKAERERLAAEKAKKEEDEQKRKASEDAQKRREEEQKWAARSNGSSRHNDSTNGSS 81
Query: 65 RERERHRREREEEAKARERARL---------------EKLAERERERELE--LIKEQYLG 107
R + +E + R+ R ++ A+++ ++E L++ +YLG
Sbjct: 82 RVPTGPKAMNQENGRDRDGYRDQGRGRGRGREGRKGDKQAADKQSAEDIEATLLRSRYLG 141
Query: 108 SK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM 160
+ KK+ ++ +EK +F+F+W+ EDTSRD + LY Q + G AG
Sbjct: 142 PQVNQQSNFSAKKKRMRTTEK-KFNFEWDADEDTSRDNDPLYTR----QAVNHNGSFAG- 195
Query: 161 DRREQKKLAAKNEKEMREEIRKK-EGVEEKPEEAAALKLKEEAADLY---DTFDMRVDR- 215
+ + + E E RK+ +E++ E + K D + D R DR
Sbjct: 196 -------VGGEFDDEAEERARKRARMIEQRDPENGKERAKGIMEDFFRARDKARQRADRT 248
Query: 216 ----HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
WSEK LE+M ERDWRIF+EDF I+ KG IP PMR+W E L LL VE VGY
Sbjct: 249 GLGKRWSEKSLEDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPKRLLNIVEDVGY 308
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP+ E N+ +GPYA+
Sbjct: 309 KEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDELNKNDGPYAL 368
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
+MAPTREL QQIE E KFA LG +VVSIVGG SIEEQ + +R G E+++ATPGRLIDC
Sbjct: 369 IMAPTRELVQQIESEARKFAGPLGFRVVSIVGGHSIEEQIYNMRDGAEIIVATPGRLIDC 428
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------L 443
L+RR VL QC YV++DEADRMIDMGFE V +L+A+P +N KP+ ED E L
Sbjct: 429 LDRRVLVLAQCCYVIMDEADRMIDMGFEEPVNRILEALPVNNEKPDTEDAEDATKMKRYL 488
Query: 444 DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM-KESEKF 502
YR T M++ATMPP VE++A+KYLR P +VTIG AG+A + + Q V + E +
Sbjct: 489 GGNDRYRQTMMYTATMPPQVEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFIPGEDRRK 548
Query: 503 SRLQRLL--DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
RLQ +L ++ IVFVN K+N D VA+++ ++G+ V TLHG K+QEQRE SL+
Sbjct: 549 KRLQEILASNDFA-PPIIVFVNIKRNCDAVARDIKQMGWTVATLHGSKTQEQREASLQSV 607
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R VLVATD+AGRGID+PDV+ V+N++M I+ YTHRIGRTGRAGK+GVA TFL
Sbjct: 608 RNGTTQVLVATDLAGRGIDVPDVSLVVNFNMAPKIDSYTHRIGRTGRAGKSGVAITFLGP 667
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D D YDLKQ+L +S+ S VP EL +HEA++ KP
Sbjct: 668 EDADTMYDLKQILSKSSISKVPEELKRHEAAQSKP 702
>gi|358377711|gb|EHK15394.1| hypothetical protein TRIVIDRAFT_38043 [Trichoderma virens Gv29-8]
Length = 727
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 295/605 (48%), Positives = 395/605 (65%), Gaps = 46/605 (7%)
Query: 80 ARERARLEKLAERERERELELIKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTE 132
++ ++ E + E E L++ +YLG + KK+ ++ +EK +F+F+W+ E
Sbjct: 113 GKKNSKTEGVKRSAAEIEDSLLRSRYLGPEVNQQSTFSAKKKRMRTTEK-KFNFEWDADE 171
Query: 133 DTSRDMNALY--QNPHEAQLLFGRG--FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEE 188
DTSRD + LY Q+ + L G G F ++R +K+ ++++ + G+ E
Sbjct: 172 DTSRDNDPLYMSQSVNRGGSLAGVGGEFDKEAEQRARKRAKMIEQRDLEHGKERAIGIME 231
Query: 189 KPEEAAALKLKEEAADLYDTFD--------MRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
D Y D + RHWS+K L EM ERDWRIF+EDF IS
Sbjct: 232 ---------------DFYRARDRAKERAERTGLGRHWSDKDLNEMRERDWRIFKEDFGIS 276
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
KG IP PMRNW E L LL V+ VGYK PS IQ AAIP+ LQ RD+IG+A TGSG
Sbjct: 277 TKGGAIPNPMRNWQESGLPRRLLDIVDNVGYKEPSAIQRAAIPIALQARDLIGVAVTGSG 336
Query: 301 KTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
KTAAF+LP+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KFA LG + VS
Sbjct: 337 KTAAFLLPLLVYISDLPPLTEANKNDGPYALIIAPTRELVQQIETEARKFAEPLGFRCVS 396
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
IVGG S+EEQ F +R G E+++ATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE
Sbjct: 397 IVGGHSLEEQAFALRNGAEIIVATPGRLVDCIERRLLVLVQCCYIIMDEADRMIDLGFED 456
Query: 421 QVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLR 472
V +LDA+P SN KP+ +D E + K YR T M++ATMPP VE++A+KYLR
Sbjct: 457 SVNKILDALPVSNEKPDTDDAENAQLMKRYVGGKDRYRQTMMYTATMPPLVEKIAKKYLR 516
Query: 473 NPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDE-LGDKTAIVFVNTKKNADMV 530
P +VTIG AG+A + + Q V + E + RLQ +L + IVFVN K+N D V
Sbjct: 517 RPAIVTIGNAGEAVDTVEQRVEFVSGEDRRKKRLQEILSSNVFAPPIIVFVNIKRNCDAV 576
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A+++ +G+ V TLHG K+QEQRE +L R+ + VLVATD+AGRGID+PDV+ VIN++
Sbjct: 577 ARDIKSMGWSVVTLHGSKTQEQREAALASVRSGQTQVLVATDLAGRGIDVPDVSLVINFN 636
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEA 649
M NIE YTHRIGRTGRAGK+GVA TFL D+DV YDLKQ+L +S+ S VP EL +HEA
Sbjct: 637 MATNIESYTHRIGRTGRAGKSGVAITFLGNEDSDVLYDLKQILSKSSISKVPDELKRHEA 696
Query: 650 SKFKP 654
++ +P
Sbjct: 697 AQSRP 701
>gi|331238187|ref|XP_003331749.1| hypothetical protein PGTG_12914 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310739|gb|EFP87330.1| hypothetical protein PGTG_12914 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 834
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 299/608 (49%), Positives = 381/608 (62%), Gaps = 63/608 (10%)
Query: 99 ELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS-RDMNALY-------------QN 144
+L+ +YLG KKR I+ +F FDW EDT+ +++ LY N
Sbjct: 222 KLLMARYLGQPDNKKRRIRKMSDKKFVFDWAKDEDTALEEVDPLYAITVPSAPPPNHSSN 281
Query: 145 PH---------------EAQL-----LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKE 184
H QL L+G G AG+D Q +A E R + E
Sbjct: 282 HHGGSHSRGSVPPPTTTAVQLVGRFGLYGNGKLAGIDPAVQTNKSAARELAQRRLDPEDE 341
Query: 185 GVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
+ +P EA + + +L HWS+K L M +RDWRIFREDF+I+ +G
Sbjct: 342 VLTSRPCEAGSKRSSAVVNEL----------HWSQKPLNAMRDRDWRIFREDFSIAARGG 391
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP PMR+W E KL ++L ++ VGYK PSPIQ AIPLGL RD+IGIAETGSGKTA+
Sbjct: 392 NIPNPMRSWEESKLPLQILEIIDEVGYKEPSPIQRQAIPLGLNNRDLIGIAETGSGKTAS 451
Query: 305 FVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
FV+PMLTYI +LPP++++N GPYA+++APTRELAQQIE ET KFA LG + VSIVGG
Sbjct: 452 FVIPMLTYIGKLPPLTDDNRHLGPYALILAPTRELAQQIEVETNKFALRLGYRCVSIVGG 511
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
+++EEQ +R G E++IATPGRL DC+ER VL QC YVV+DEADRMI++GFE V
Sbjct: 512 KAMEEQALNMRDGAEIIIATPGRLKDCIERHVLVLGQCTYVVMDEADRMINLGFEEVVNF 571
Query: 425 VLDAMPSSNLKPENEDEE-----------------LDEKRIYRTTYMFSATMPPAVERLA 467
+LD +P SNLKP+ E+ E K +YR T MFSATMPPAVERLA
Sbjct: 572 ILDQLPLSNLKPDTEEAEDSSKMTSFVGGVEGFDLTGAKGLYRQTVMFSATMPPAVERLA 631
Query: 468 RKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
+KYLR P VVTIG AG+A + + Q V + E +K RL +L++ IVFVN KK
Sbjct: 632 KKYLRRPAVVTIGVAGQAVDTVDQQVEFLPNEDKKRGRLLEVLNQGHTPPIIVFVNQKKT 691
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD +AK++ + G+ TTLH GK+QEQRE +L R ++LVATD+AGRGID+PDV V
Sbjct: 692 ADQLAKDISRAGWSTTTLHSGKNQEQREAALASLRAGESDILVATDLAGRGIDVPDVGLV 751
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELA 645
+N+ M G IE Y HRIGRTGRAGK G A TFLT D DV YDLKQ +++S S PPELA
Sbjct: 752 VNFQMAGTIEAYVHRIGRTGRAGKVGTAITFLTNDDADVMYDLKQEIMKSPVSKCPPELA 811
Query: 646 KHEASKFK 653
KHEA++ K
Sbjct: 812 KHEAAQSK 819
>gi|324505355|gb|ADY42303.1| ATP-dependent RNA helicase DDX23 [Ascaris suum]
Length = 515
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 277/468 (59%), Positives = 347/468 (74%), Gaps = 14/468 (2%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
+RHW++K LEEM ERDWRIFREDFNIS KG ++P+P+RNWAE L E+L + ++GYK
Sbjct: 48 NRHWTQKTLEEMQERDWRIFREDFNISIKGGRVPKPLRNWAEAGLPSEVLDVIIKIGYKE 107
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI-SEENEAEGPYAVV 332
P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I+ LP I S E++ GPYA++
Sbjct: 108 PTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITSLPKIQSNEDQDSGPYAII 167
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
MAPTRELAQQIEEETVKF LGI+ VS++GG S EEQG ++R G EVVIATPGRL+D L
Sbjct: 168 MAPTRELAQQIEEETVKFGQLLGIRTVSVIGGASREEQGLKLRLGVEVVIATPGRLLDVL 227
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE------- 445
E RY L+QC YV+LDEADRM+DMGFEP+V VL+ +P +NLKP+ E+ E +E
Sbjct: 228 ENRYLSLDQCTYVILDEADRMLDMGFEPEVQKVLEYIPVTNLKPDTEEAEKEESIMENFY 287
Query: 446 -KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K+ YR T MF+ATM PA+ERLAR YLR P VV IG+ G+ TE + Q V M+ E K +
Sbjct: 288 SKKKYRQTVMFTATMSPAIERLARAYLRRPAVVYIGSVGRPTERVEQIVYMIGEERKRKK 347
Query: 505 LQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L LL E + I+FVN KK ADM+AK L KLG+ LHGGK Q+ RE SL +
Sbjct: 348 LVELLSSEAFEPPIIIFVNQKKGADMLAKGLTKLGFAPCVLHGGKGQDAREYSLAALKDG 407
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
++LVATDVAGRGIDI DV+ V+NYDM +IE YTHRIGRTGRAGK G A TFLT D
Sbjct: 408 SKDILVATDVAGRGIDIKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPEDK 467
Query: 624 DVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGT-IPDRPPRRNDTVF 669
DVFYDLKQ L++S S PPELA H ++ KPGT +P + R+++T++
Sbjct: 468 DVFYDLKQCLLESPISTCPPELANHPEAQQKPGTFVPKK--RQDETLY 513
>gi|170088270|ref|XP_001875358.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650558|gb|EDR14799.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 691
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/676 (46%), Positives = 422/676 (62%), Gaps = 62/676 (9%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRER---ERH 70
KP FL+K +R +LA+ +R ++I +QK + E ++ + R +S+ RER RH
Sbjct: 27 KPKFLSKEERAKLAISKRAQEIREQKEKDELSKR---DREVLEREASELSIRERIQPSRH 83
Query: 71 RREREEEAKAR----------------ERARLEKLAERERERELELIKEQYLGSKKPKKR 114
+ R +R E +L I+ +YLG K K++
Sbjct: 84 GDRYGRRDRDRDGHRGGRQPPPPHAQDDRQPTSTYVPPMTENDLTAIRSRYLGVDKKKRK 143
Query: 115 VIKPSEKFRFSFDWENTEDTSRDMN--ALYQNPHEAQLLFGRGFRAGMDR---REQKKLA 169
+ K +++ +F FDW+ +DT D + A+ N AQ++FGRG AGMD +K++
Sbjct: 144 IRKMNDR-KFVFDWDTQDDTFADDSPVAVGSNRQGAQVMFGRGRLAGMDDGGGSGPRKIS 202
Query: 170 AKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERD 229
+ A A++ ++ A +D DRHW++K L+EM ERD
Sbjct: 203 GNGPVDT--------------HLADAMERRKAAKAGFD------DRHWTDKPLDEMKERD 242
Query: 230 WRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQR 289
WRIFREDF+IS +G IP P+R+W E + +L +E++GYK+PSPIQ AIP+GL R
Sbjct: 243 WRIFREDFSISARGGSIPHPLRSWTESAIPQPILDCIEQIGYKDPSPIQRQAIPIGLLNR 302
Query: 290 DVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
D+IGIAETGSGKTAAFV+PML++IS LPP +++ GPYA++MAPTRELAQQIE E K
Sbjct: 303 DIIGIAETGSGKTAAFVIPMLSFISGLPPFTDDIRHLGPYALIMAPTRELAQQIESEARK 362
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA LG K VSIVGG S+EEQ F +R+G E++IATPGRL D +ER VL+QC YVV+DE
Sbjct: 363 FASPLGFKCVSIVGGVSVEEQQFNLREGAEIIIATPGRLKDVIERHVLVLSQCRYVVMDE 422
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-------EKRIYRTTYMFSATMPPA 462
ADRM+ +GFE + +LDA+PS ++ E+ E++D +K R T +FSATMP A
Sbjct: 423 ADRMVHLGFEADLTFILDALPSETMQGEDLGEQMDVDGETMIKKGRTRVTTLFSATMPAA 482
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGD----KTAI 518
VERLARKYL+ P V+TIG AG+A + + Q V + EK + Q+LL+ L I
Sbjct: 483 VERLARKYLKKPAVITIGEAGRAVDTVEQRVEFVSGDEK--KKQKLLEILNSGQYASPII 540
Query: 519 VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGI 578
VFVN KK ADMVAK+L + G+ TLH GK+QEQRE SL+ R +VLVATD+AGRGI
Sbjct: 541 VFVNQKKTADMVAKDLSRAGWNAATLHSGKNQEQREASLQSLRNGESDVLVATDLAGRGI 600
Query: 579 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN- 637
D+ DV+ VIN+ M IE Y HRIGRTGRAGK G A TFLT D +V YDLKQ + +S
Sbjct: 601 DVQDVSLVINFQMANTIEAYVHRIGRTGRAGKLGTAITFLTNDDDEVMYDLKQEISKSPV 660
Query: 638 SPVPPELAKHEASKFK 653
S VP ELAKHEA++ K
Sbjct: 661 SKVPAELAKHEAAQHK 676
>gi|425769163|gb|EKV07664.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
gi|425770721|gb|EKV09185.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
Length = 772
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 294/577 (50%), Positives = 387/577 (67%), Gaps = 31/577 (5%)
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
L K +Y+G+ + K+ K + +F+F+W EDTS D N LYQ EA FGRG
Sbjct: 191 LTKHRYMGADQTSNFSAKKKRKRTADRKFNFEWNTEEDTSGDYNPLYQKRQEANF-FGRG 249
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE----EAADLYDTFDM 211
AG +A K E + + EA + + K+ E D+
Sbjct: 250 RLAGFGDDVADDVARKY----------AEALAARDHEAGSARAKQMLEMERRRREDSTRT 299
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
++D+HWSEK+L+ M ERDWRIF+EDFNI+ KG +P PMR+W E L LL V+RVGY
Sbjct: 300 QIDKHWSEKRLDLMRERDWRIFKEDFNIATKGGSVPNPMRSWEESHLPKRLLELVDRVGY 359
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE---AEGP 328
K+P+ IQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YIS LP + +ENE +GP
Sbjct: 360 KDPTAIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISALPRL-DENEWRKNDGP 418
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ F +R G E++IATPGRL
Sbjct: 419 YAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAFSLRDGAEIIIATPGRL 478
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD---E 445
+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ++ E
Sbjct: 479 VDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTDEAENSTAMS 538
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSR 504
+ YR T M++ATMP AVER+ARKYLR P ++TIG G+A + + Q V M+ E ++ R
Sbjct: 539 QHKYRQTMMYTATMPAAVERIARKYLRRPAIITIGGVGEAVDTVEQRVEMISGEDKRKKR 598
Query: 505 LQRLLDELGDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
L +L G+ A IVFVN K+N D +A+ + ++G+ TLHG K+Q+QRE +L R
Sbjct: 599 LGEILSS-GEFRAPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQDQREAALASVRN 657
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+VLVATD+AGRGID+PDV+ V+N++M +IE YTHR+GRTGRAGK+GVA TFL D
Sbjct: 658 GSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRVGRTGRAGKSGVAITFLGSED 717
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIP 658
+DV YDLKQMLI+S S VP EL KHEA++ KP P
Sbjct: 718 SDVMYDLKQMLIKSPISRVPEELRKHEAAQSKPSRGP 754
>gi|389748974|gb|EIM90151.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Stereum hirsutum FP-91666 SS1]
Length = 809
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 292/579 (50%), Positives = 390/579 (67%), Gaps = 31/579 (5%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNP-----HEAQLL 151
+L I+ +YLG K K+++ K +++ +F FDW+ EDT +A + P AQ++
Sbjct: 225 DLSAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQEDTFSSADAPHILPEGVTRQGAQVM 283
Query: 152 FGRGFRAGMD-------RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
FGRG AGMD R + + E + + V+ P A ++ ++ A
Sbjct: 284 FGRGHIAGMDDGGNSSAARREAGGTGTGKGETGGKGETRAAVD--PNLADPMERRKAAKA 341
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
YD DRHW+EK LE+M ERDWRIFREDF+I+ +G IP P+R+W E + ++L
Sbjct: 342 GYD------DRHWTEKPLEDMKERDWRIFREDFSIAARGGNIPHPLRSWLESTIPQQILD 395
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
V+ VGYK PSPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PMLT+IS+LPP ++EN
Sbjct: 396 VVDSVGYKEPSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLTFISKLPPFTDENR 455
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
GPY++++APTRELAQQIE E KFA LG K VSIVGG+++EEQ F +R+G E++IAT
Sbjct: 456 HLGPYSLILAPTRELAQQIESEARKFATPLGFKCVSIVGGRAVEEQQFNLREGAEIIIAT 515
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
PGRL D LER VL+QC YVV+DEADRM+ +GFE + +LD +PS ++ E+ + +D
Sbjct: 516 PGRLKDVLERHVLVLSQCRYVVMDEADRMVHLGFEVDLTFILDKLPSETMEGEDTGQRMD 575
Query: 445 ---EKRI----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMM 496
E + R T +FSATMPPAVERLARKYL+ P ++TIG AG+A + + Q V ++
Sbjct: 576 VDGETMVNVGRTRVTTLFSATMPPAVERLARKYLKRPAIITIGEAGRAVDTVDQRVEFVI 635
Query: 497 KESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
E +K RL +L+ G IVFVN KK AD VAK+L + G+ +TLH GK+QEQRE
Sbjct: 636 GEEKKKQRLLEILNNGGFQPPMIVFVNQKKTADQVAKDLSRAGWNSSTLHSGKNQEQREA 695
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+L+ R +VLVATD+AGRGID+ DV+ V+N+ M IE Y HRIGRTGRAGK GVA
Sbjct: 696 ALQALRNGDADVLVATDLAGRGIDVQDVSLVVNFQMANTIEAYVHRIGRTGRAGKQGVAI 755
Query: 616 TFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
TFLT D +V YDLKQ + +S S VPPELA+HE+++ K
Sbjct: 756 TFLTNDDDEVMYDLKQEISKSPVSKVPPELARHESAQHK 794
>gi|330925821|ref|XP_003301209.1| hypothetical protein PTT_12655 [Pyrenophora teres f. teres 0-1]
gi|311324270|gb|EFQ90696.1| hypothetical protein PTT_12655 [Pyrenophora teres f. teres 0-1]
Length = 690
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/664 (46%), Positives = 430/664 (64%), Gaps = 41/664 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQE---------QQQQLLSQPQTHGRNSSDSRD 64
KP F+ +A+RE++ALE+R++++ ++++E + Q ++P T R+ ++
Sbjct: 31 KPRFIPRAERERIALEKRKKEVEDAQKKREGLSRGGDGAWRPQHDTRPPTGPRSMREAPT 90
Query: 65 RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRV-----IKPS 119
R R + ++ ++ A+ E LI+++Y+G ++ + K +
Sbjct: 91 GPRHERRNDNMAPPPVPDKRHGKRPADENPE--AALIRQRYMGPEQNQSTFSAKKKRKRT 148
Query: 120 EKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 179
+ +F+F+W EDTS+D N +YQ E G GF ++ ++M E
Sbjct: 149 TEKKFNFEWNEEEDTSQDYNPIYQQKAEVSFRLG-GF--------SDEVTDAARQKMIEA 199
Query: 180 IRKKEGVEEKPEE--AAALKLKE-EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRED 236
I +E PE A A +L+E E ++D+HWSEK+LE M ERDWRIF+ED
Sbjct: 200 I-----IERDPENGRARAEQLREMERRRKEKGGRSQLDKHWSEKRLENMRERDWRIFKED 254
Query: 237 FNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAE 296
F I+ KG IP PMRNW E L +L+R V++VGY P+PIQ AAIP+ LQ RD+IG+A+
Sbjct: 255 FQIATKGGSIPNPMRNWQEAGLPDQLMRIVDQVGYTEPTPIQRAAIPIALQCRDLIGVAK 314
Query: 297 TGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGI 356
TGSGKTAAF+LP+L YIS+LPP+ N +GPYA+++APTRELAQQIEEE KFA LG
Sbjct: 315 TGSGKTAAFLLPLLAYISQLPPLDAINRHDGPYALILAPTRELAQQIEEEARKFATPLGF 374
Query: 357 KVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 416
+ +VGG SIEEQ F++R G E++IATPGRL DC+ERR VL+QC YV++DEADRMIDM
Sbjct: 375 RTAVLVGGHSIEEQSFQMRDGAEIIIATPGRLNDCIERRVLVLSQCTYVIMDEADRMIDM 434
Query: 417 GFEPQVVGVLDAMPSSNLKP---ENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
GFE V +L A+P SN KP E ED + ++ +YR T M++ATMPPA+ER+A++Y R
Sbjct: 435 GFEEPVNKILAALPVSNEKPDTEEAEDPDAMKRGLYRQTMMYTATMPPALERIAKQYSRR 494
Query: 474 PVVVTIGTAGKATELISQHVVMMKESEKF-SRLQRLLDELGD--KTAIVFVNTKKNADMV 530
P +VTIG G+AT+ + Q V ++ EK RLQ +L G+ IVFVN K+N D +
Sbjct: 495 PAIVTIGNLGEATDTVEQRVEFIQGEEKRKKRLQEILTS-GEFAPPIIVFVNIKRNCDAI 553
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A+++ +G+ T+HG K+QEQRE +L ++ + NVLVATD+AGRGIDIPDV+ V+N++
Sbjct: 554 ARDIKHMGFSSATMHGSKTQEQREAALAALKSGQTNVLVATDLAGRGIDIPDVSLVVNFN 613
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEA 649
MP +IE YTHRIGRTGR K G A TF D DV YDLKQ+L +SN S VP +L KHEA
Sbjct: 614 MPSSIEAYTHRIGRTGRQDKKGTAITFWGNEDADVLYDLKQILTKSNLSKVPEDLRKHEA 673
Query: 650 SKFK 653
++ K
Sbjct: 674 AQQK 677
>gi|312077794|ref|XP_003141459.1| RNA helicase [Loa loa]
Length = 674
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 283/530 (53%), Positives = 371/530 (70%), Gaps = 22/530 (4%)
Query: 91 ERERERELE----LIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPH 146
ERE +++LE I+++YLG ++ K++ + + +F FDW+ EDTS D N LYQN H
Sbjct: 144 ERETDKDLEKLNEAIRQRYLGGQREKRKRGRRLHERKFIFDWDAGEDTSNDYNKLYQNRH 203
Query: 147 EAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY 206
E Q FGRG AGMD QKK ++ + E+ R KE +++ A +K KE+
Sbjct: 204 EVQF-FGRGSIAGMDVNAQKKQKSEFYANLMEKRRTKEEKQQEELRLAGVKKKEKK---- 258
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ FD +RHW++K LE+MTERDWRIFREDFNIS KG ++P+P+RNW E L E+ +
Sbjct: 259 EAFD---NRHWTQKSLEQMTERDWRIFREDFNISIKGGRVPKPLRNWDEAGLPSEVFDVI 315
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
++GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I+ +P +E +
Sbjct: 316 MKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITSIPKFHGNDEQD 375
Query: 327 -GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
GPYA++MAPTRELAQQIEEETVKF LGI+ VS++GG S EEQG ++R G EVVIATP
Sbjct: 376 TGPYAIIMAPTRELAQQIEEETVKFGQLLGIRTVSVIGGASREEQGLKLRLGVEVVIATP 435
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+D LE RY L+QC YV+LDEADRM+DMGFEP+V VL+ +P +NLKP+ ED E +E
Sbjct: 436 GRLLDVLENRYLSLDQCTYVILDEADRMLDMGFEPEVQKVLEYIPVTNLKPDTEDAEKEE 495
Query: 446 --------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
K+ YR T MF+ATM PA+ERLAR YLR P VV IG+ G+ TE + Q V M+
Sbjct: 496 SIMENFFSKKKYRQTVMFTATMSPAIERLARAYLRRPAVVYIGSVGRPTERVEQIVYMIG 555
Query: 498 ESEKFSRLQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
E K +L L+ + + I+FVN K+ ADM+AK L KLG++ LHGGK Q+ RE S
Sbjct: 556 EESKRKKLVELISSDAFEPPIIIFVNQKRGADMLAKGLTKLGFQPCVLHGGKGQDAREYS 615
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
L + ++LVATDVAGRGIDI DV+ V+NYDM +IE YTHRIGRTG
Sbjct: 616 LAALKDGTKDILVATDVAGRGIDIKDVSLVLNYDMAKSIEDYTHRIGRTG 665
>gi|395744332|ref|XP_003778088.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23-like [Pongo abelii]
Length = 799
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/684 (45%), Positives = 428/684 (62%), Gaps = 51/684 (7%)
Query: 14 KPLFLTKAQREQLALERR-----------QEQIAQQKRRQEQQQQLLSQPQTHGRNSSDS 62
KP FL+K ++E A+++R +++ ++KR Q+ +++L PQ
Sbjct: 140 KPKFLSKVEQEAEAVKQRQQEVEEQQRMLEKERKKRKRFQDLGRKMLEDPQERECRECRE 199
Query: 63 RDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKF 122
R + E + K E E+++ +EL IKE YLG K + + +++
Sbjct: 200 RMERETSGNEDEEGQQKIWE--------EKDKSKELHAIKEHYLGGIKKRHQTRHLNDR- 250
Query: 123 RFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK 182
+F F+W+ +EDTS D N LY+ H+ Q+L G+GF AG+D EQ ++ E+ R
Sbjct: 251 KFVFEWDASEDTSIDYNLLYKERHQVQVL-GQGFIAGIDLXEQSHFCG----DLMEKXRT 305
Query: 183 KEGVEEKPEEAAALKL-KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISY 241
E E+K EA KL K+EA +D D HWS+KKL+EM +RDW +F E ++I+
Sbjct: 306 LEEKEQK--EARLRKLHKKEAKRXWD------DPHWSQKKLDEMRDRDWWLFCEGYSITT 357
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
K KIP P+R+W + L P +L +++ GYK +PIQ AIP+GLQ RD+I +AETGS K
Sbjct: 358 KDGKIPNPIRSWKDSSLPPHILEVIDKCGYKESTPIQCQAIPIGLQNRDIIDVAETGSSK 417
Query: 302 TAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
TAAF++P+L I+ LP I E++ GPYA ++APT +LAQQIEEET+KF L I V+
Sbjct: 418 TAAFLIPLLVXITTLPKIDRIEESDQGPYANILAPTHKLAQQIEEETIKFGKPLDIXTVA 477
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E++GFR+R GCE+VI TPG LID LE RY VL+ C YVVLDEADRMI+MGFEP
Sbjct: 478 VIGGISREDRGFRLRMGCEIVITTPGHLIDVLENRYLVLSCCXYVVLDEADRMINMGFEP 537
Query: 421 QVVGVLDAMPSSNLKPENEDEELDE---------KRIYRTTYMFSATMPPAVERLARKYL 471
V +L+ MP SN KP+ ++ E E KR T MF ATMPPAVERLAR YL
Sbjct: 538 DVQKILEHMPVSNQKPDMDEAEDPEKMLANFESGKRXRTTKVMFMATMPPAVERLARSYL 597
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
+ P VV I AGK E + Q V +M ESEK +L +L + I+FVN KK D++A
Sbjct: 598 QRPAVVYIDPAGKPHERVEQ-VFLMSESEKRKKLLAILKQGFGPAIIIFVNQKKGCDILA 656
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY+ LH GK QEQRE +L + ++LVATDV GRGIDI DV+ V+NYDM
Sbjct: 657 KSLEKMGYKACALHSGKGQEQREFALSNLKAGAKDILVATDVTGRGIDIQDVSMVVNYDM 716
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-----SPVPPELAK 646
NI+ Y H I RTGRAGK+GVA TFLT D+ VFY+ KQ +++S S PPELA
Sbjct: 717 AKNIDDYKHLIDRTGRAGKSGVAITFLTKEDSAVFYEPKQAILESKDRKTVSSCPPELAN 776
Query: 647 HEASKFKPGTIPDRPPRRNDTVFA 670
H ++ KPGTI + RR +T+FA
Sbjct: 777 HPDAQHKPGTILTK-KRREETIFA 799
>gi|189205421|ref|XP_001939045.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975138|gb|EDU41764.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 690
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 431/664 (64%), Gaps = 41/664 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQI--AQQKRR-------QEQQQQLLSQPQTHGRNSSDSRD 64
KP F+ +A+RE++ALE+R++++ AQ+KR + + Q ++P T R+ ++
Sbjct: 31 KPRFIPRAERERIALEKRKKEVEDAQKKREGLSGGDDRAWKPQHDTRPPTGPRSMREAPT 90
Query: 65 RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRV-----IKPS 119
R R + ++ ++ A+ E LI+++Y+G ++ + K +
Sbjct: 91 GPRHERRNDNMAPPPLPDKKHGKRPADENPE--AALIRQRYMGPEQNQSTFSAKKKRKRT 148
Query: 120 EKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 179
+ +F+F+W EDTS+D N +YQ E G GF ++ ++M E
Sbjct: 149 TEKKFNFEWNEEEDTSQDYNPIYQQKAEVSFRLG-GF--------SDEVTDAARQKMIEA 199
Query: 180 IRKKEGVEEKPEE--AAALKLKE-EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRED 236
I +E PE A A +L+E E ++D+HWSEK+LE M ERDWRIF+ED
Sbjct: 200 I-----IERDPENGRARAEQLREMERRRKEKGGRSQLDKHWSEKRLENMRERDWRIFKED 254
Query: 237 FNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAE 296
F I+ KG IP PMRNW E L +L+R V++VGY P+PIQ AAIP+ LQ RD+IG+A+
Sbjct: 255 FQIATKGGSIPNPMRNWQEAGLPDQLMRIVDQVGYTEPTPIQRAAIPIALQCRDLIGVAK 314
Query: 297 TGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGI 356
TGSGKTAAF+LP+L YIS+LPP+ N +GPYA+++APTRELAQQIEEE KFA LG
Sbjct: 315 TGSGKTAAFLLPLLAYISQLPPLDAINRHDGPYALILAPTRELAQQIEEEARKFATPLGF 374
Query: 357 KVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 416
+ +VGG SIEEQ F++R G E++IATPGRL DC+ERR VL+QC YV++DEADRMIDM
Sbjct: 375 RTAVLVGGHSIEEQSFQMRDGAEIIIATPGRLNDCIERRVLVLSQCTYVIMDEADRMIDM 434
Query: 417 GFEPQVVGVLDAMPSSNLKP---ENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
GFE V +L A+P +N KP E ED + ++ +YR T M++ATMPPA+ER+A++Y R
Sbjct: 435 GFEEPVNKILAALPVNNEKPDTEEAEDADAMKRGLYRQTMMYTATMPPALERIAKQYSRR 494
Query: 474 PVVVTIGTAGKATELISQHVVMMKESEKF-SRLQRLLDELGD--KTAIVFVNTKKNADMV 530
P +VTIG G+AT+ + Q V ++ EK RLQ +L G+ IVFVN K+N D +
Sbjct: 495 PAIVTIGNLGEATDTVEQRVEFIQGEEKRKKRLQEILTS-GEFAPPIIVFVNIKRNCDAI 553
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A+++ +G+ T+HG K+QEQRE +L ++ + NVLVATD+AGRGIDIPDV+ V+N++
Sbjct: 554 ARDIKHMGFSSATMHGSKTQEQREAALAALKSGQTNVLVATDLAGRGIDIPDVSLVVNFN 613
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEA 649
MP +IE YTHRIGRTGR K G A TF D DV YDLKQ+L +SN S VP +L KHEA
Sbjct: 614 MPSSIEAYTHRIGRTGRQDKKGTAITFWGNEDADVLYDLKQILTKSNLSKVPEDLRKHEA 673
Query: 650 SKFK 653
++ K
Sbjct: 674 AQQK 677
>gi|396478747|ref|XP_003840607.1| similar to pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Leptosphaeria maculans JN3]
gi|312217179|emb|CBX97128.1| similar to pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Leptosphaeria maculans JN3]
Length = 815
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 316/677 (46%), Positives = 427/677 (63%), Gaps = 49/677 (7%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLS------QPQTHGRNSSDSRDRER 67
KP F++KA+RE+LALE+RQ+++ + ++R+E L + +++G ++ S
Sbjct: 138 KPKFMSKAERERLALEKRQKEVEELQKRREASNGLSNGSSQNDYSRSNGASNGASSIPTG 197
Query: 68 ERHRREREEEAKARERARL-------------EKLAERERERELE--LIKEQYLG----- 107
R R + R +K +R + E +I+ +Y+G
Sbjct: 198 PRSMRPDPPSGPSSTRQDRRNGGDMAPPPVPDKKTGKRPASEDTEALMIRNRYMGPELNQ 257
Query: 108 SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM----DRR 163
S K+ K + + +F+F+W EDTS D + +YQ EA D
Sbjct: 258 STFSAKKKRKRTTEKKFNFEWNEEEDTSYDHDPIYQQKSEAGFFGRGRLGGFTEEVQDAS 317
Query: 164 EQKKLAAKNEKEMRE-EIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKL 222
Q+ L A E++ IR ++ +E + + KEE ++D+HWSEKKL
Sbjct: 318 TQRFLEAMIERDPETGRIRAEQILEME------RRRKEEGGR------AQLDKHWSEKKL 365
Query: 223 EEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAI 282
E M ERDWRIF+EDFNI+ KG IP PMRNW+E L +L+R VE+VGY PS IQ AAI
Sbjct: 366 EHMRERDWRIFKEDFNIATKGGAIPNPMRNWSESGLPDKLMRIVEQVGYTEPSAIQRAAI 425
Query: 283 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQ 342
P+ LQ RD+IG+A TGSGKTAAF+LP+L YIS+LPP+S N +GPYA+V+APTRELAQQ
Sbjct: 426 PIALQCRDLIGVAVTGSGKTAAFILPLLVYISQLPPLSAANRHDGPYALVLAPTRELAQQ 485
Query: 343 IEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQC 402
IE E KFA LG IVGG SIEEQ F+++ G E++IATPGRL+DC+ERR VL+QC
Sbjct: 486 IEVEARKFAAPLGFNTAVIVGGHSIEEQSFQMQAGAEIIIATPGRLVDCIERRVLVLSQC 545
Query: 403 NYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEELDEKRIYRTTYMFSATM 459
YV++DEADRMIDMGFE V +LDA+P +N KP++ ED ++ YR T M++ATM
Sbjct: 546 TYVIMDEADRMIDMGFEEPVNKILDALPVNNEKPDSELAEDANAMKRGFYRQTMMYTATM 605
Query: 460 PPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLL-DELGDKTA 517
P AVER+ARKYLR P +VTIG G+A E + Q V ++ E + RLQ +L E
Sbjct: 606 PTAVERIARKYLRRPAIVTIGNVGEAVETVEQRVEHIQGEERRKKRLQEILSSEEFRPPI 665
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
IVFVN K+N D +A+++ +G+ TLHG K+QEQRE +L + R +VLVATD+AGRG
Sbjct: 666 IVFVNIKRNCDAIARDIKHMGFSAVTLHGSKTQEQREAALASLKEGRTDVLVATDLAGRG 725
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
IDI DV+ V+N++M +IE YTHRIGRTGRAGK+GVA TF D DV YDLKQML++S
Sbjct: 726 IDITDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLYDLKQMLMKSQ 785
Query: 638 -SPVPPELAKHEASKFK 653
S VP +L KHEA++ K
Sbjct: 786 ISKVPEDLRKHEAAQQK 802
>gi|380491163|emb|CCF35514.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Colletotrichum
higginsianum]
Length = 736
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 311/687 (45%), Positives = 429/687 (62%), Gaps = 60/687 (8%)
Query: 17 FLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ--------------THGRNSSDS 62
F+ K +RE+ A E+ +++ ++KR+ E+ + ++ + TH + +
Sbjct: 32 FIPKKERERQAAEKAKQEEDERKRKAEEDAKKKAELERKWAAEANGAITNGTHTYHGAGG 91
Query: 63 R-----------DRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKP 111
R D R R RE++ + + + K + E +L++ +YLG +
Sbjct: 92 RIPTGPKAMHAIDNARGPGGRGREKQEQRKASTKDGKEKKSAEAIEADLLRNRYLGPEVN 151
Query: 112 KKRVIKPSEKFR----FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK 167
K+ +K + F F+W+ EDT+ + +Y++ + G +G E ++
Sbjct: 152 KQSNFSVKKKRKRATEFKFEWDAEEDTTLVDDPIYESNSTTLKSYTFGSLSGEYNEEAEE 211
Query: 168 LAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY---DTFDMRVDR-----HWSE 219
+A R+ +EE+ E + KE D Y + R DR HW++
Sbjct: 212 IAR----------RRARMIEERDREFGKKRAKEFMEDFYRAREKAKERADRSGLGKHWTK 261
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K L EM ERDWRIF+EDF I+ KG +IP PMR+W E L +LL V+RVGYK+PSPIQ
Sbjct: 262 KALSEMRERDWRIFKEDFGIATKGGQIPNPMRSWEESGLPRQLLNIVDRVGYKDPSPIQR 321
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
AAIP+ +Q RD+IG+A TGSGKTAAF+LP+LTYI LPP++E N+ +G YA+++APTREL
Sbjct: 322 AAIPIAMQARDLIGVAVTGSGKTAAFLLPLLTYIQDLPPLTEINKNDGAYALILAPTREL 381
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
QQIE E KFA LG VVSIVGG S+EEQ + G E+++ATPGRL+DC+ERR VL
Sbjct: 382 VQQIESEAHKFADPLGFNVVSIVGGHSMEEQVQALSHGAEIIVATPGRLVDCIERRLLVL 441
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRT 451
+QC YV++DEADRMID+GFE V +LDA+P SN KP+ +D E L + YR
Sbjct: 442 SQCCYVIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAENAQMMQKYLGARDRYRQ 501
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLD 510
T M++ATMPP VE++ARKYLR P +VTIG AG+A E + Q V + E +K RLQ +L
Sbjct: 502 TMMYTATMPPTVEKIARKYLRRPAIVTIGNAGEAVETVEQRVEFVSGEDKKKKRLQEILG 561
Query: 511 ELGDKT--AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVL 568
GD IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L R + VL
Sbjct: 562 -AGDFAPPIIVFVNIKRNCDAVARDVQRMGYSAVTLHGSKTQEQREAALASVRNGQTQVL 620
Query: 569 VATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYD 628
VATD+AGRGID+PDV+ VIN++M NIE YTHRIGRTGRAGK+GVA TFL D+D+FYD
Sbjct: 621 VATDLAGRGIDVPDVSLVINFNMATNIESYTHRIGRTGRAGKSGVAITFLEQSDSDLFYD 680
Query: 629 LKQMLIQSN-SPVPPELAKHEASKFKP 654
LKQML +S+ S VP EL +HEA++ KP
Sbjct: 681 LKQMLSKSSISRVPEELRRHEAAZQKP 707
>gi|340923930|gb|EGS18833.1| hypothetical protein CTHT_0054430 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 709
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 311/638 (48%), Positives = 405/638 (63%), Gaps = 57/638 (8%)
Query: 54 THGRNSSDSRDRERERHR---------REREEEAKARERARLEKLAERERERELELIKEQ 104
T+G N D D + + R R E + R +K AE ER E EL + +
Sbjct: 79 TNGANGMDGIDNKAKSQRDIPTGPKAMRHGEGGKRGRTNEEEQKRAEMERNDEAEL-RAR 137
Query: 105 YLG--------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGF 156
Y+G S K K+R +F+FDW+ +DTSR + +Y LF
Sbjct: 138 YMGPEVNQSTFSVKKKRRRTATQ---KFNFDWDPDDDTSRPFDPIYA--ERPDPLF---- 188
Query: 157 RAGMDRREQKKLAAKNEKEMREEI--RKKEGVEE-KPE--EAAALKLKEEAADLYDTFDM 211
++A EM +E+ RK E + PE E A KL E+ + +
Sbjct: 189 ----------RMAGY---EMDDELVLRKAEAIRRGDPETGEERARKLLEQHQRVKQLKEQ 235
Query: 212 R-VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
+ + +HWSEKKLEEM ERDWRIF+E+F IS KG IP PMRNW E L LL V RVG
Sbjct: 236 KNLGKHWSEKKLEEMKERDWRIFKENFGISTKGGSIPNPMRNWEESGLPRRLLDIVYRVG 295
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYA 330
Y P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA
Sbjct: 296 YDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEYNKNDGPYA 355
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
+++APTREL QQIE E KFA LG VVSIVGG S+EEQ F +R G E+++ATPGRL+D
Sbjct: 356 LILAPTRELVQQIESEARKFADPLGFTVVSIVGGHSLEEQAFALRNGAEIIVATPGRLVD 415
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-------- 442
C+ERR V +QC YV++DEADRMID GFE + +LDA+P SN KP+ ED E
Sbjct: 416 CIERRLLVFSQCCYVIMDEADRMIDQGFEEPLTKILDALPVSNEKPDTEDAENPQLMSRY 475
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEK 501
L + YR T M++ATMPP VE++A+KYLR P +VTIG AG+A + + Q V + E ++
Sbjct: 476 LGGRDRYRQTMMYTATMPPTVEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFIAGEDKR 535
Query: 502 FSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
RLQ +L+ K IVFVN K+N +MVAK++ G+ TLHG K+QEQRE SL
Sbjct: 536 KRRLQEILNSGQFKPPIIVFVNIKRNCEMVAKDIKSWGFSTVTLHGSKTQEQREASLAAL 595
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R + ++LVATD+AGRGID+PDV+ V+N++MP IE YTHRIGRTGRAGK+GVA TFL
Sbjct: 596 RNGQAHILVATDLAGRGIDVPDVSLVVNFNMPSTIEAYTHRIGRTGRAGKSGVAITFLGN 655
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTI 657
D DV YDLKQ++ +S+ S VP EL +HEA++ KP +
Sbjct: 656 EDADVMYDLKQIISKSSISKVPEELRRHEAAQSKPNRV 693
>gi|407921626|gb|EKG14767.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 619
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 298/582 (51%), Positives = 388/582 (66%), Gaps = 41/582 (7%)
Query: 97 ELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
E ELI+++Y+GS++ K+ K + + +F+F+W EDTS D N LYQ EA
Sbjct: 34 ERELIRQRYMGSEQNTSTFSAKKKRKRTTEKKFNFEWNAEEDTSTDYNPLYQTRAEAGFF 93
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDM 211
D N + R + + E+ +EA +++ AA++ +
Sbjct: 94 GRGRLGGFSDD------VVDNATK-----RYVQALAERDKEAGSVR----AAEIMEMERR 138
Query: 212 R--------VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
R +D+HWSEK+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL
Sbjct: 139 RKEEGGRAALDKHWSEKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWEESGLPKRLL 198
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 323
++ VGY PSPIQ AAIP+ L RD+IG+A TGSGKTAAF+LP+L YIS LPP++E
Sbjct: 199 DIIKDVGYLEPSPIQRAAIPIALGSRDLIGVAVTGSGKTAAFLLPLLVYISELPPLNEFT 258
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+ +GPYA+++APTRELAQQIE E KFA LG VSIVGG SIEEQ + +R G E++IA
Sbjct: 259 KNDGPYAIILAPTRELAQQIEIEAKKFATPLGFTCVSIVGGHSIEEQAYNMRDGAEIIIA 318
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE- 442
TPGRL+DC+ERR VL QC YV++DEADRMID+GFE V +LDA+P N KP++E E
Sbjct: 319 TPGRLVDCIERRVLVLGQCCYVIMDEADRMIDLGFEEPVNKILDALPVGNEKPDDETAEN 378
Query: 443 -------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
L K YR T M++ATMPPAVER+ARKYLR P +VTIG G+A E + Q V
Sbjct: 379 TVAMSQHLGGKDRYRQTMMYTATMPPAVERIARKYLRRPAIVTIGNVGEAVETVEQRVEF 438
Query: 496 MK-ESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ E ++ RLQ +L+ G+ T IVFVN K+N D VA+++ +G+ TLHG K+QEQ
Sbjct: 439 VSGEDKRKKRLQEILNS-GEFTPPIIVFVNIKRNCDAVARDIKHMGFSSVTLHGSKTQEQ 497
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L R + +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G
Sbjct: 498 REAALASLRNGQVDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 557
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
VA TFL D DV YDLKQML +S+ S VP EL KHEA++ K
Sbjct: 558 VAITFLGNEDVDVMYDLKQMLSKSSISRVPEELRKHEAAQQK 599
>gi|336465424|gb|EGO53664.1| hypothetical protein NEUTE1DRAFT_133987 [Neurospora tetrasperma
FGSC 2508]
gi|350295288|gb|EGZ76265.1| Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 [Neurospora
tetrasperma FGSC 2509]
Length = 728
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/598 (49%), Positives = 388/598 (64%), Gaps = 58/598 (9%)
Query: 87 EKLAERERERELELIKEQYLG--------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDM 138
EK A+ ER E EL + +Y+G S K K+R + +F+FDW+ +DTSR
Sbjct: 138 EKRAKMERNDEAEL-RARYMGPVVNQSTFSAKKKRRRTAAN---KFNFDWDADDDTSRPF 193
Query: 139 NALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI--RKKEGVEEKPEEAAAL 196
+ +Y E + G G+ EM EE+ RK E + E
Sbjct: 194 DPIYAERQEPLVRLG-GY------------------EMTEEMVMRKAEAIRRGDPETG-- 232
Query: 197 KLKEEAADLYDTFDMRV---------DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIP 247
EE A Y R+ +HWSEKKLE+M ERDWRIF+E+F I+ KG IP
Sbjct: 233 ---EERARQYLDQHRRIKEMEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIP 289
Query: 248 RPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVL 307
PMR+W E L LL V+ VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+L
Sbjct: 290 NPMRSWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLL 349
Query: 308 PMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSI 367
P+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KFA LG VVSIVGG S+
Sbjct: 350 PLLVYISELPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSL 409
Query: 368 EEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD 427
EEQ F +R G E+++ATPGRL+DCLERR V +QC Y ++DEADRMID GFE + +LD
Sbjct: 410 EEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILD 469
Query: 428 AMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
AMP +N KP+ +D E +D K YR T M++ATMPP VER+A+KYLR P +VTI
Sbjct: 470 AMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTI 529
Query: 480 GTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKL 537
G AG+A + + Q V + E ++ RLQ +L+ K IVFVN K+N DMVA+++ +
Sbjct: 530 GNAGEAVDTVEQRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKGM 589
Query: 538 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 597
GY TLHG K+QEQRE +L R + ++LVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 590 GYSAVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIES 649
Query: 598 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YTHRIGRTGRAGK+GVA TFL D DV YDL+Q++ +S+ S VP EL +HEA++ KP
Sbjct: 650 YTHRIGRTGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKP 707
>gi|116181632|ref|XP_001220665.1| hypothetical protein CHGG_01444 [Chaetomium globosum CBS 148.51]
gi|118597484|sp|Q2HEB0.1|PRP28_CHAGB RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|88185741|gb|EAQ93209.1| hypothetical protein CHGG_01444 [Chaetomium globosum CBS 148.51]
Length = 705
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/611 (49%), Positives = 397/611 (64%), Gaps = 44/611 (7%)
Query: 69 RHRREREEEAKARERARL----EKLAERERERELELIKEQYLG---------SKKPKKRV 115
RH + E +R RL EK AE ER+ EL + +Y+G +KK +KR
Sbjct: 92 RHPGDSGEPEHGGKRRRLNDNDEKRAEMERKDAAEL-RAKYMGPEVNQSTFSAKKKRKR- 149
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALY-QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK 174
+ +F+FDW+ +DTSR + +Y + P L G + R+ + + + +
Sbjct: 150 ---TAANKFNFDWDPEDDTSRPFDPVYAERPESLVRLAGYENTDELVLRKAEAIRRGDPE 206
Query: 175 EMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFR 234
E RK E+ ++AA K +HWSEKKLE+M ERDWRIF+
Sbjct: 207 TGEERARKLLEQHERVKQAAERK--------------NFGKHWSEKKLEDMKERDWRIFK 252
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+F I+ KG IP PMR+WAE L LL VE VGY P+PIQ AAIP+ Q RD+IG+
Sbjct: 253 ENFGIATKGGAIPNPMRSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGV 312
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KFA L
Sbjct: 313 AVTGSGKTAAFLLPLLVYISELPPLTEFNKNDGPYALILAPTRELVQQIETEARKFAGPL 372
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
G VVSIVGG S+EEQ F +R G E+++ATPGRL+DCLERR V +QC Y+++DEADRMI
Sbjct: 373 GFTVVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYIIMDEADRMI 432
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERL 466
D GFE + +LDA+P +N KP+ ED E L K YR T M++ATMPP VE++
Sbjct: 433 DQGFEEPLTKILDALPVANEKPDTEDAENSQLMSRYLGGKDRYRQTMMYTATMPPLVEKI 492
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDK-TAIVFVNTK 524
A+KYLR P +VTIG AG+A + + Q V + E ++ RLQ +L+ K IVFVN K
Sbjct: 493 AKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDKRKRRLQEILNSGQFKPPVIVFVNIK 552
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+N +MVAK++ GY TLHG K+QEQRE SL R + N+LVATD+AGRGID+ DV+
Sbjct: 553 RNCEMVAKDIKSWGYSTVTLHGSKTQEQREASLASVRNGQANILVATDLAGRGIDVADVS 612
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPE 643
V+N++MP +IE YTHRIGRTGRAGK+GVA TFL D+DV YDLKQ++ +S+ S VP E
Sbjct: 613 LVVNFNMPSSIEAYTHRIGRTGRAGKSGVAITFLGNEDSDVMYDLKQIISKSSISKVPEE 672
Query: 644 LAKHEASKFKP 654
L +HEA++ KP
Sbjct: 673 LRRHEAAQSKP 683
>gi|85113073|ref|XP_964459.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
gi|74654326|sp|Q7SEL0.1|PRP28_NEUCR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp-28
gi|28926242|gb|EAA35223.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
Length = 728
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 298/598 (49%), Positives = 388/598 (64%), Gaps = 58/598 (9%)
Query: 87 EKLAERERERELELIKEQYLG--------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDM 138
EK A+ ER E EL + +Y+G S K K+R + +F+FDW+ +DTSR
Sbjct: 138 EKRAKMERNDEAEL-RARYMGPVVNQSTFSAKKKRRRTAAN---KFNFDWDADDDTSRPF 193
Query: 139 NALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI--RKKEGVEEKPEEAAAL 196
+ +Y E + G G+ EM EE+ RK E + E
Sbjct: 194 DPIYAERQEPLVRLG-GY------------------EMTEEMVMRKAEAIRRGDPETG-- 232
Query: 197 KLKEEAADLYDTFDMRV---------DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIP 247
EE A Y R+ +HWSEKKLE+M ERDWRIF+E+F I+ KG IP
Sbjct: 233 ---EERARQYLEQHRRIKEMEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIP 289
Query: 248 RPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVL 307
PMR+W E L LL V+ VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+L
Sbjct: 290 NPMRSWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLL 349
Query: 308 PMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSI 367
P+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KFA LG VVSIVGG S+
Sbjct: 350 PLLVYISELPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSL 409
Query: 368 EEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD 427
EEQ F +R G E+++ATPGRL+DCLERR V +QC Y ++DEADRMID GFE + +LD
Sbjct: 410 EEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILD 469
Query: 428 AMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
AMP +N KP+ +D E +D K YR T M++ATMPP VER+A+KYLR P +VTI
Sbjct: 470 AMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTI 529
Query: 480 GTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKL 537
G AG+A + + Q V + E ++ RLQ +L+ K IVFVN K+N DMVA+++ +
Sbjct: 530 GNAGEAVDTVEQRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKGM 589
Query: 538 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 597
GY TLHG K+QEQRE +L R + ++LVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 590 GYSAVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIES 649
Query: 598 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YTHRIGRTGRAGK+GVA TFL D DV YDL+Q++ +S+ S VP EL +HEA++ KP
Sbjct: 650 YTHRIGRTGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKP 707
>gi|449547452|gb|EMD38420.1| hypothetical protein CERSUDRAFT_105018 [Ceriporiopsis subvermispora
B]
Length = 758
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 287/571 (50%), Positives = 390/571 (68%), Gaps = 36/571 (6%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT--SRDMNALYQNPHEAQLLFGR 154
+L+ I+ +YLG K K+++ K +++ +F FDW+ +DT + A+ AQ++FGR
Sbjct: 195 DLDAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQDDTYSAETPAAMGSQRQGAQVMFGR 253
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AGMD + + + + EG++ A +++ ++ A D +
Sbjct: 254 GHIAGMD--DVGGVVPATGQHI-------EGMQH----ADSMERRKAARSGLD------E 294
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
RHWS+K LEEM ERDWRIFREDF+I+ +G +IP P+R+W E + E+L ++++GYK P
Sbjct: 295 RHWSDKSLEEMKERDWRIFREDFSIAARGGQIPHPLRSWKESIIPSEILEVIDKIGYKEP 354
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
SPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML++IS+LPP ++E GPYA++MA
Sbjct: 355 SPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLSFISKLPPFTDEIRHLGPYALIMA 414
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELAQQIE ET KFA LG VSIVGG+S+EEQ F +R G E++IATPGRL D +ER
Sbjct: 415 PTRELAQQIESETKKFAGPLGFTCVSIVGGRSVEEQQFNLRSGAEIIIATPGRLKDVIER 474
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-------EKR 447
VL+QC YVV+DEADRM+++GFE + +LD +PS ++ E++ E++D +K
Sbjct: 475 HVIVLSQCRYVVMDEADRMVNLGFEVDLTFILDKLPSDTMEGEDQGEQMDVDGETMIKKG 534
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
R T +FSATMPP VERLA+KYL+ P ++TIG AG+A + + Q V + EK + QR
Sbjct: 535 RNRVTTLFSATMPPPVERLAKKYLKKPAIITIGEAGRAVDTVEQKVEFVSGDEK--KKQR 592
Query: 508 LLDEL--GDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+L+ G A IVFVN KK ADMVAK+L + G+ TLH GK+QEQRE +L+ RT
Sbjct: 593 MLEIFNSGQYAAPIIVFVNQKKTADMVAKDLQRAGWSAATLHSGKNQEQREAALQSLRTG 652
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
++LVATD+AGRGID+ DV+ V+NY M IE Y HRIGRTGRAGK G + TFLT D
Sbjct: 653 DSDILVATDLAGRGIDVQDVSLVVNYQMANTIEAYVHRIGRTGRAGKQGTSITFLTNDDE 712
Query: 624 DVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
+V YDLKQ + +S S VP ELAKHEA++ K
Sbjct: 713 EVMYDLKQEISKSPVSKVPTELAKHEAAQHK 743
>gi|408388319|gb|EKJ68005.1| hypothetical protein FPSE_11816 [Fusarium pseudograminearum CS3096]
Length = 721
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 293/583 (50%), Positives = 389/583 (66%), Gaps = 35/583 (6%)
Query: 97 ELELIKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN----P 145
E L++ +YLG + KK+ ++ +EK +F+F+W+ EDTSRD + LY
Sbjct: 130 EATLLRSRYLGPQVNQQSNFSAKKKRMRTTEK-KFNFEWDADEDTSRDNDPLYDRQTAVS 188
Query: 146 HEAQLL-FGRGFRAGMDRREQK--KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEA 202
H G F G + R +K K+ A+ + E +E + EG+ E + +++A
Sbjct: 189 HNGSFAGIGGEFDDGAEERARKRAKMIAQRDPENGKE--RAEGIMED-----FFRARDKA 241
Query: 203 ADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPEL 262
D + +HWSEK L++M ERDWRIF+EDF I+ KG IP PMR+W E L L
Sbjct: 242 RQRADRRGL--GKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPQRL 299
Query: 263 LRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE 322
L V+ VGYK+PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP+ E
Sbjct: 300 LNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEI 359
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
N+ +GPYA++MAPTREL QQIE E KFA LG +VVSIVGG IEEQ + +R G E+V+
Sbjct: 360 NKHDGPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVV 419
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ++ E
Sbjct: 420 ATPGRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAE 479
Query: 443 --------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV 494
L + YR T M++ATMPP VER+A+KYLR P +VTIG AG+A + + Q V
Sbjct: 480 NAQIMQRYLGGRDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVE 539
Query: 495 MMK-ESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ E + RLQ +L IVFVN K+N D VA+++ ++G+ TLHG K+QEQ
Sbjct: 540 FVSGEDRRKKRLQEILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQ 599
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L R VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G
Sbjct: 600 REAALGSVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 659
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
VA TFL D + YDLKQ+L +S+ S VP EL +HEA++ KP
Sbjct: 660 VAITFLGPEDNETMYDLKQILSKSSISKVPEELRRHEAAQSKP 702
>gi|358391439|gb|EHK40843.1| hypothetical protein TRIATDRAFT_286438 [Trichoderma atroviride IMI
206040]
Length = 722
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 309/693 (44%), Positives = 429/693 (61%), Gaps = 71/693 (10%)
Query: 15 PLFLTKAQREQLALE--------RRQEQIAQQKRRQEQQQQLLSQ--------------- 51
P F+ KA+RE+LA E R+++ + +RR+E++++ ++
Sbjct: 22 PRFIPKAERERLAAEKAKQEEQERQRKTVDDSQRRREEEKKWEARANGLPVSNGVPNGAV 81
Query: 52 -PQTHGRNSSDSRDRERERHRREREEEAKARERARLEKLAERERERELELIKEQYLG--- 107
P T R + + + K +A E E E L++ +YLG
Sbjct: 82 APPTGPRAMNQTSGGGSRGRDGREGRDGKKNSKA--ENAKRSAAEIEDSLLRSRYLGPEV 139
Query: 108 ----SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALY--QNPHEAQLLFGRG--FRAG 159
S KK+ ++ +EK +F+F+W+ EDTSRD + LY Q+ + L G G F
Sbjct: 140 NKQSSFSAKKKRMRTTEK-KFNFEWDVEEDTSRDNDPLYASQSVNRGGSLAGVGGEFDEE 198
Query: 160 MDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR------- 212
++R +K+ ++++ + +G+ E D Y
Sbjct: 199 AEQRARKRARMIEQRDIEHGKERAKGIME---------------DFYRARARAKERAERT 243
Query: 213 -VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
+ RHWS+K L EM ERDWRIF+EDF I+ KG IP PMR+W E L LL V++VGY
Sbjct: 244 GLGRHWSDKDLNEMRERDWRIFKEDFGIATKGGAIPNPMRSWGESGLPRRLLDIVDKVGY 303
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K PS IQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA+
Sbjct: 304 KEPSAIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLTEANKNDGPYAL 363
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTREL QQIE E KFA LG + VSIVGG S+EEQ F +R G E+++ATPGRL+DC
Sbjct: 364 IIAPTRELVQQIETEAKKFAEPLGFRCVSIVGGHSLEEQVFALRNGAEIIVATPGRLVDC 423
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP---ENEDEELDEKRI 448
+ERR VL QC Y+++DEADRMID+GFE V +LDA+P +N KP E E+ +L ++ +
Sbjct: 424 IERRLLVLVQCCYIIMDEADRMIDLGFEDSVNKILDALPVTNEKPDTDEAENAQLMKRYV 483
Query: 449 ----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFS 503
YR T M++ATMPP VE++A+KYLR P +VTIG AG+A + + Q V + E +
Sbjct: 484 GKDRYRQTMMYTATMPPLVEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFISGEDRRKK 543
Query: 504 RLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RLQ +L IVFVN K+N D VA+++ +G+ V TLHG K+QEQRE +L R+
Sbjct: 544 RLQEILGSAAYAPPIIVFVNIKRNCDAVARDIKSMGWSVVTLHGSKTQEQREAALASVRS 603
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+ VLVATD+AGRGID+PDV+ VIN++M NIE YTHRIGRTGRAGK+GVA TFL D
Sbjct: 604 GQSQVLVATDLAGRGIDVPDVSLVINFNMATNIESYTHRIGRTGRAGKSGVAITFLGNED 663
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
+DV YDLKQ+L +S+ S +P EL +HEA++ +P
Sbjct: 664 SDVLYDLKQILSKSSISKLPDELRRHEAAQSRP 696
>gi|46124943|ref|XP_387025.1| hypothetical protein FG06849.1 [Gibberella zeae PH-1]
gi|91207408|sp|Q4I7F9.1|PRP28_GIBZE RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 721
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 293/583 (50%), Positives = 389/583 (66%), Gaps = 35/583 (6%)
Query: 97 ELELIKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN----P 145
E L++ +YLG + KK+ ++ +EK +F+F+W+ EDTSRD + LY
Sbjct: 130 EATLLRSRYLGPQVNQQSNFSAKKKRMRTTEK-KFNFEWDADEDTSRDNDPLYDRQTAVS 188
Query: 146 HEAQLL-FGRGFRAGMDRREQK--KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEA 202
H G F G + R +K K+ A+ + E +E + EG+ E + +++A
Sbjct: 189 HNGSFAGIGGEFDDGAEERARKRAKMIAQRDPENGKE--RAEGIMED-----FFRARDKA 241
Query: 203 ADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPEL 262
D + +HWSEK L++M ERDWRIF+EDF I+ KG IP PMR+W E L L
Sbjct: 242 RQRADRRGL--GKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPQRL 299
Query: 263 LRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE 322
L V+ VGYK+PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP+ E
Sbjct: 300 LNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEI 359
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
N+ +GPYA++MAPTREL QQIE E KFA LG +VVSIVGG IEEQ + +R G E+V+
Sbjct: 360 NKHDGPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVV 419
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ++ E
Sbjct: 420 ATPGRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAE 479
Query: 443 --------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV- 493
L + YR T M++ATMPP VER+A+KYLR P +VTIG AG+A + + Q V
Sbjct: 480 NAQIMQRYLGGRDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVE 539
Query: 494 VMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ E + RLQ +L IVFVN K+N D VA+++ ++G+ TLHG K+QEQ
Sbjct: 540 FVSGEDRRKKRLQEILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQ 599
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L R VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G
Sbjct: 600 REAALGSVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 659
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
VA TFL D + YDLKQ+L +S+ S VP EL +HEA++ KP
Sbjct: 660 VAITFLGPEDHETMYDLKQILSKSSISKVPEELRRHEAAQSKP 702
>gi|336274640|ref|XP_003352074.1| hypothetical protein SMAC_00622 [Sordaria macrospora k-hell]
gi|380096359|emb|CCC06407.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 730
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 294/591 (49%), Positives = 392/591 (66%), Gaps = 40/591 (6%)
Query: 82 ERARLEKLAERE-RERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNA 140
+R ++EK E E R R + + Q S K K+R + +F+FDW+ +DTSR +
Sbjct: 141 KRVKMEKNDEAELRARYMGPVVNQSTFSAKKKRRRTAAN---KFNFDWDADDDTSRPFDP 197
Query: 141 LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI--RKKEGVEE-KPE--EAAA 195
+Y E + G G+ EM EE+ RK E + PE E A
Sbjct: 198 IYAERQEPLVRLG-GY------------------EMTEEMIMRKAEAIRRGDPETGEERA 238
Query: 196 LKLKEEAADLYDTFDMR-VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWA 254
+ E+ + +T + + +HWSEKKLE+M ERDWRIF+E+F I+ KG IP PMR+W
Sbjct: 239 RQYLEQHRRIKETEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWD 298
Query: 255 EGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYIS 314
E L LL V+ VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS
Sbjct: 299 ESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYIS 358
Query: 315 RLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI 374
LPP++E N+ +GPYA+++APTREL QQIE E KFA LG VVSIVGG S+EEQ + +
Sbjct: 359 ELPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSLEEQAYAL 418
Query: 375 RQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNL 434
R G E+++ATPGRL+DCLERR V +QC Y ++DEADRMID GFE + +LDAMP +N
Sbjct: 419 RNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAMPVTNE 478
Query: 435 KPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
KP+ +D E +D K YR T M++ATMPP VER+A+KYLR P +VTIG AG+A
Sbjct: 479 KPDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTIGNAGEAV 538
Query: 487 ELISQHV-VMMKESEKFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKLGYRVTTL 544
+ + Q V + E ++ RLQ +L+ K IVFVN K+N DMVA+++ +G+ TL
Sbjct: 539 DTVEQRVEFVAGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKHMGFSAVTL 598
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HG K+QEQRE +L R + ++LVATD+AGRGID+PDV+ V+N++M NIE YTHRIGR
Sbjct: 599 HGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGR 658
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
TGRAGK+GVA TFL D DV YDL+Q++ +S+ S VP EL +HEA++ KP
Sbjct: 659 TGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKP 709
>gi|398394485|ref|XP_003850701.1| hypothetical protein MYCGRDRAFT_60826, partial [Zymoseptoria
tritici IPO323]
gi|339470580|gb|EGP85677.1| hypothetical protein MYCGRDRAFT_60826 [Zymoseptoria tritici IPO323]
Length = 640
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 296/586 (50%), Positives = 383/586 (65%), Gaps = 26/586 (4%)
Query: 82 ERARLEKLAEREREREL--ELIKEQYLGSKK------PKKRVIKPSEKFRFSFDWENTED 133
+ A+L+K + E E+ ELIK++Y+G+++ K + + +EK +F+F+W ED
Sbjct: 39 DNAKLKKKNHNQSESEVAAELIKQRYMGAEQNVSTFSAKNKRKRTTEK-KFNFEWNAEED 97
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
TS D N LY N FGRG G + AAK EE G E
Sbjct: 98 TSPDYNPLY-NVRSENNFFGRGKLGGF-ADDANDTAAKQYARAIEERDPDAGSRRAAEML 155
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
K + E +D+HWSEK+LE M ERDWRIF+EDFNI+ KG IP PMR+W
Sbjct: 156 EMEKRRREEGGRNG-----IDKHWSEKRLEHMRERDWRIFKEDFNIATKGGAIPNPMRSW 210
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E L LL V GY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI
Sbjct: 211 EESGLPKRLLDIVYDAGYVEPSAVQRAAIPIALQSRDLIGVAVTGSGKTAAFLLPLLVYI 270
Query: 314 SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFR 373
S LPP+ E + +GPYA+++APTRELAQQIE E KFA LG VS+VGG SIEEQ +
Sbjct: 271 SNLPPLDEMTKNDGPYAIILAPTRELAQQIELEAKKFATPLGFTCVSLVGGHSIEEQSYN 330
Query: 374 IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSN 433
+R G E++IATPGRL+DC+ERR VL+QC Y+++DEADRMID+GFE V +LDA+P SN
Sbjct: 331 MRDGAEIIIATPGRLVDCIERRVLVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVSN 390
Query: 434 LKPEN---EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
KP++ ED + K YR T M++ATMPPAVER+ARKYLR P VTIG G+A + +
Sbjct: 391 EKPDSDIAEDPDAMAKHTYRQTMMYTATMPPAVERIARKYLRRPATVTIGNVGEAVDTVE 450
Query: 491 QHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
Q V + +K R +RL + L + IVFVN K+ D +A+++ K+G++ TLHG
Sbjct: 451 QRVEFVPGEDK--RKKRLAEILHSREFAAPIIVFVNVKRACDSLARDIQKMGFQTVTLHG 508
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
K+Q+QRE +L R + VLVATD+AGRGID+PDV+ V+N+ M NIE YTHRIGRTG
Sbjct: 509 SKTQDQREAALASLRNGQTEVLVATDLAGRGIDVPDVSLVVNFMMSHNIEAYTHRIGRTG 568
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
RAGK GVA TFL D DV YDLKQM+ +S S +P ELAKHEA++
Sbjct: 569 RAGKEGVAITFLGNEDADVMYDLKQMIGKSKISRLPNELAKHEAAQ 614
>gi|367052807|ref|XP_003656782.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
gi|347004047|gb|AEO70446.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
Length = 718
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 291/588 (49%), Positives = 389/588 (66%), Gaps = 38/588 (6%)
Query: 87 EKLAERERERELELIKEQYLG--------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDM 138
EK AE ER + +K +Y+G S K K+R + +F+FDW+ +DTSR
Sbjct: 126 EKRAEMERN-DAAALKARYMGPEVNQSTFSVKKKRRRTAAN---KFNFDWDPDDDTSRPY 181
Query: 139 NALY-QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALK 197
+ +Y + P L G + RR+ + + + + + R+ E+ ++AA K
Sbjct: 182 DPIYAERPDPLIRLAGYENDDELVRRKAELIRRGDPETGEQRARQLLEQHERAKQAAERK 241
Query: 198 LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
+ +HWSEKKLE+M ERDWRIF+E+F I+ KG IP PMR+W E
Sbjct: 242 --------------NLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWQESN 287
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
L LL V VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP
Sbjct: 288 LPRRLLEIVHSVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELP 347
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P++E+N+ +GPYA+++APTREL QQIE E KFA LG VVSIVGG S+EEQ F +R G
Sbjct: 348 PLTEDNKNDGPYALILAPTRELVQQIETEARKFADPLGFTVVSIVGGHSLEEQAFALRNG 407
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E+++ATPGRL+DCLERR V +QC Y+++DEADRMID GFE + +LDA+P +N KP+
Sbjct: 408 AEIIVATPGRLVDCLERRLLVFSQCCYIIMDEADRMIDQGFEEPLTKILDALPVTNEKPD 467
Query: 438 NEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
ED E L K YR T M++ATMPP VE++A+KYLR P +VTIG AG+A + +
Sbjct: 468 TEDAENPQLMSRYLGGKDRYRQTMMYTATMPPLVEKIAKKYLRRPAIVTIGNAGEAVDTV 527
Query: 490 SQHV-VMMKESEKFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKLGYRVTTLHGG 547
Q V + E ++ RLQ +L+ K IVFVN K+N +MVAK++ GY TLHG
Sbjct: 528 EQRVEFIAGEDKRKRRLQEILNSGQFKPPIIVFVNIKRNCEMVAKDIKSWGYSTVTLHGS 587
Query: 548 KSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 607
K+QEQRE SL R + ++LVATD+AGRGID+PDV+ V+N++MP +IE YTHRIGRTGR
Sbjct: 588 KTQEQREASLASLRNGQSSILVATDLAGRGIDVPDVSLVVNFNMPSSIEAYTHRIGRTGR 647
Query: 608 AGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
AGK+GVA TFL D DV YDL+Q++ +S+ S VP EL +HEA++ KP
Sbjct: 648 AGKSGVAITFLGNEDADVMYDLRQIISKSSISKVPEELRRHEAAQSKP 695
>gi|402591380|gb|EJW85309.1| hypothetical protein WUBG_03780, partial [Wuchereria bancrofti]
Length = 676
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 287/540 (53%), Positives = 373/540 (69%), Gaps = 24/540 (4%)
Query: 86 LEKLAERERERELE--LIKEQYL---GSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNA 140
LEKL E R+R L L+ E ++ G ++ +KR + E+ +F FDW+ EDTS D N
Sbjct: 145 LEKLNEAIRQRYLGKFLLSEFWIISGGQREKRKRGRRLHER-KFIFDWDAGEDTSNDYNK 203
Query: 141 LYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE 200
LYQN HE Q FGRG AGMD QKK ++ + E+ R KE +++ A +K KE
Sbjct: 204 LYQNRHEVQF-FGRGSIAGMDVNAQKKQKSEFYANLMEKRRTKEEKQQEELRLAGVKKKE 262
Query: 201 EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP 260
+ + FD +RHW++K L++MTERDWRIFREDFNIS KG ++P+P+RNW E L
Sbjct: 263 KK----EAFD---NRHWTQKSLDQMTERDWRIFREDFNISIKGGRVPKPLRNWEEAGLPS 315
Query: 261 ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS 320
E+ + ++GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I+ +P
Sbjct: 316 EVFDVIMKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITSIPKFH 375
Query: 321 EENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
+E + GPYA++MAPTRELAQQIEEETVKF LGI+ VS++GG S EEQG ++R G E
Sbjct: 376 GNDEQDTGPYAIIMAPTRELAQQIEEETVKFGQLLGIRTVSVIGGASREEQGLKLRLGVE 435
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
VVIATPGRL+D LE RY L+QC YV+LDEADRM+DMGFEP+V VL+ +P +NLKP+ E
Sbjct: 436 VVIATPGRLLDVLENRYLSLDQCTYVILDEADRMLDMGFEPEVQKVLEYIPVTNLKPDTE 495
Query: 440 DEELDE--------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQ 491
D E +E K+ YR T MF+ATM PA+ERLAR YLR P VV IG+ G+ TE + Q
Sbjct: 496 DAEKEESIMENFFSKKKYRQTVMFTATMSPAIERLARAYLRRPAVVYIGSIGRPTERVEQ 555
Query: 492 HVVMMKESEKFSRLQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQ 550
V M+ E K +L L+ + + I+FVN K+ ADM+AK L KLG++ LHGGK Q
Sbjct: 556 IVYMIGEESKRKKLVELISSDAFEPPIIIFVNQKRGADMLAKGLTKLGFQPCVLHGGKGQ 615
Query: 551 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 610
+ RE SL + ++LVATDVAGRGIDI DV+ V+NYDM +IE YTHRIGRTG K
Sbjct: 616 DAREYSLAALKDGTKDILVATDVAGRGIDIKDVSLVLNYDMAKSIEDYTHRIGRTGNTVK 675
>gi|358331630|dbj|GAA50408.1| probable ATP-dependent RNA helicase DDX23, partial [Clonorchis
sinensis]
Length = 903
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/466 (58%), Positives = 333/466 (71%), Gaps = 16/466 (3%)
Query: 199 KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
K EA YD DRHW+EK L +M ERDWRIFRED+ IS KG IP P+R+WAE
Sbjct: 72 KREARQKYD------DRHWTEKALSQMVERDWRIFREDYGISTKGGNIPNPLRSWAEMDA 125
Query: 259 TPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP 318
+PEL +++VGY +P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I LP
Sbjct: 126 SPELKEVIKKVGYADPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLNWIQSLPK 185
Query: 319 ISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
+ E+ +GPYA++MAPTRELAQQIEEETVKF LGIK VS++GG S EEQ ++R G
Sbjct: 186 LERMEDTEQGPYAIIMAPTRELAQQIEEETVKFGRALGIKTVSLIGGLSREEQALKLRMG 245
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E+VI TPGRL D LE RY VLNQC YVVLDEAD+MIDMGFEP+V +L +P +N KP+
Sbjct: 246 AEIVIGTPGRLNDVLENRYIVLNQCTYVVLDEADKMIDMGFEPEVNNILSYLPVTNEKPD 305
Query: 438 NEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
ED E D K + YR T MF+ATMPPAVERLAR YLR P VV IG+AGK TE +
Sbjct: 306 TEDAEDDSKLLSNFATKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPTERV 365
Query: 490 SQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKS 549
Q V ++ E EK +L +L+ D I+FVN KK ADM+AK L+KLG+ LHGGK
Sbjct: 366 EQIVYLVSEQEKRKKLLEILNRGIDPPVIIFVNQKKGADMLAKGLEKLGHSAVVLHGGKG 425
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
QEQRE +L ++ + +LVATDVAGRGIDI DV+ VINYDM I+ Y HRIGRTGRAG
Sbjct: 426 QEQREYALASLKSGQKEILVATDVAGRGIDIKDVSLVINYDMSKTIDDYVHRIGRTGRAG 485
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
K+G A T LT D V+YDLKQ+L+QS S P ELA H ++ KP
Sbjct: 486 KSGTAITLLTKEDAPVYYDLKQLLLQSPVSTCPHELANHPDAQTKP 531
>gi|400602905|gb|EJP70503.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 732
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 291/587 (49%), Positives = 379/587 (64%), Gaps = 40/587 (6%)
Query: 95 ERELELIKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E E EL++ +YLG + +K+ ++ +EK +F+FDW+ EDTSR E
Sbjct: 136 EIEAELLRSRYLGPEVNQHSHFSAQKKRMRTTEK-KFNFDWDAGEDTSR--------ADE 186
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEG-VEEKPEEAAALKLKEEAADLY 206
G G R + + +KE E +K+ +E++ E + K D Y
Sbjct: 187 GGFSGGAGVRG----FSLAGVGGEFDKEAEERAKKRARLIEQRDPEHGRERAKGIMEDFY 242
Query: 207 DTFDMRVDR--------HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
D DR W+EK+L+EM ERDWRIF+EDF IS KG +P PMRNW E L
Sbjct: 243 RARDKARDRAEKTGLGRRWNEKRLDEMRERDWRIFKEDFGISTKGGTLPNPMRNWKESGL 302
Query: 259 TPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP 318
LL +E+VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP
Sbjct: 303 PSRLLNIIEQVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPP 362
Query: 319 ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 378
+ E N+ +GPYA+++APTREL QQIE E KF LG + VSIVGG S+EEQ + +R G
Sbjct: 363 LGETNKNDGPYALILAPTRELVQQIETEAKKFGDPLGFRSVSIVGGHSLEEQAYALRNGA 422
Query: 379 EVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
E+++ATPGRLIDC+ERR VL+QC YV++DEADRMIDMGFE V +LDA+P SN KP+
Sbjct: 423 EIIVATPGRLIDCIERRLLVLSQCCYVIMDEADRMIDMGFEEPVNKILDALPVSNEKPDT 482
Query: 439 EDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
E+ E + EK YR T MF+ATMPP VE +A+KYLR P + IG G+A E +
Sbjct: 483 EEAEDGRLMQRYVGEKDRYRQTMMFTATMPPLVENIAKKYLRRPAMAMIGNVGEAVETVE 542
Query: 491 QHV-VMMKESEKFSRLQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
Q V + E + RLQR+L + IVFVN K+N D VAK++ +G+ LHG K
Sbjct: 543 QQVEFVAGEDARKKRLQRILASNMFAPPIIVFVNIKRNCDAVAKDVRSMGWSAVPLHGSK 602
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+QEQRE +L R+ VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRA
Sbjct: 603 TQEQREAALASVRSGETQVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRA 662
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GK+G A TFL D DV YDL+QML +S+ S VP EL KHEA++ +P
Sbjct: 663 GKSGTAITFLGNEDADVLYDLRQMLSKSSISKVPEELKKHEAAQTRP 709
>gi|403415647|emb|CCM02347.1| predicted protein [Fibroporia radiculosa]
Length = 727
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/573 (49%), Positives = 388/573 (67%), Gaps = 36/573 (6%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT--SRDMNALYQNPHEAQLLF 152
+ +L I+ +YLG K K+++ K +++ +F FDW+ +DT + A+ AQ++F
Sbjct: 162 DNDLTAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQDDTYNAETPAAIGSQRQGAQIMF 220
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR 212
GRG AGMD A K E ++ + +E + +AA L E
Sbjct: 221 GRGHIAGMD---DGAAAPAGRKSSTEGMQLADPLERR--KAAKSGLDE------------ 263
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYK 272
RHW+EK L+EM ERDWRIFREDF+I+ +G +IP P+R+W E + ++L ++++GYK
Sbjct: 264 --RHWTEKSLDEMKERDWRIFREDFSIAARGGQIPHPLRSWTESIIPQQILDVIDKIGYK 321
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
PSPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML++IS+LPP +++N GPY+++
Sbjct: 322 EPSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLSFISKLPPFTDDNRHLGPYSLI 381
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE ET KFA LG VSIVGG+S+EEQ F +R G E++IATPGRL D +
Sbjct: 382 LAPTRELAQQIESETKKFAGPLGFTCVSIVGGRSVEEQQFNLRSGAEIIIATPGRLKDVI 441
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-------E 445
ER VL+QC Y+V+DEADRM+++GFE + +LD +PS ++ E++ E++D +
Sbjct: 442 ERHVIVLSQCRYIVMDEADRMVNLGFEADLTFILDKLPSDTMEGEDQGEQMDVDGETMVK 501
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
+ R T +FSATMPP VERLA+KYL+ P ++TIG AG+A + + Q V + EK +
Sbjct: 502 RGRTRVTTLFSATMPPPVERLAKKYLKRPAIITIGEAGRAVDTVEQKVEFVNGDEK--KR 559
Query: 506 QRLLDEL--GDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
QR+L+ L G A IVFVN KK AD+VAK+L + G+ TLH GK+QEQRE +L+ R
Sbjct: 560 QRMLEILNTGGYAAPIIVFVNQKKTADVVAKDLQRAGWSAATLHSGKNQEQREAALQSLR 619
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+ ++LVATD+AGRGID+ DV+ VINY M IE Y HRIGRTGRAGK G A T LT
Sbjct: 620 SGDSDILVATDLAGRGIDVQDVSLVINYQMSSTIEAYVHRIGRTGRAGKQGTAITLLTND 679
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
D +V YDL+Q + +S S VP ELAKHEA++ K
Sbjct: 680 DEEVMYDLRQEISKSPVSKVPVELAKHEAAQHK 712
>gi|453082146|gb|EMF10194.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 807
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/586 (49%), Positives = 379/586 (64%), Gaps = 42/586 (7%)
Query: 93 ERERELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
ER + L K++Y+GS + K + + +F+F+W EDTS D N +Y E
Sbjct: 228 ERAKVAALTKQRYMGSDTNTSTFSASKKRKRTTEKKFNFEWNAEEDTSPDYNPIYATRSE 287
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYD 207
FGRG G A + + + + E PE K+ AA++ D
Sbjct: 288 NNF-FGRGRLGGF---------ADDATDAQARAYAQAIAERDPEAG-----KQRAAEILD 332
Query: 208 --------TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLT 259
+D+HWSEKKLE M ERDWRIF+EDFNI+ KG IP PMRNW E L
Sbjct: 333 MERRRREEGGRTGIDKHWSEKKLENMRERDWRIFKEDFNIATKGGSIPNPMRNWQESGLP 392
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
LL VE+VGY +PSPIQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+LTYIS LP +
Sbjct: 393 KRLLDIVEQVGYTDPSPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLTYISDLPAL 452
Query: 320 SEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
E + +GPYA+++APTRELAQQIE E KFA LG VS+VGG SIEEQ + +R G E
Sbjct: 453 DEMTKNDGPYAIILAPTRELAQQIEIEAKKFATPLGFTCVSLVGGHSIEEQSYNMRDGAE 512
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
++IATPGRL+DC+ERR VL+QC Y+++DEADRMID+GFE V +LDA+P +N KP+ +
Sbjct: 513 IIIATPGRLVDCIERRVLVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTD 572
Query: 440 DEELDEKRI-------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQH 492
+ E YR T M++ATMP AVER+A+KYLR P VTIG G+A + + Q
Sbjct: 573 EAENASAMTQHVGLSKYRQTMMYTATMPSAVERIAKKYLRRPAQVTIGNVGEAVDSVEQR 632
Query: 493 VVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
V ++ EK R +RL + L IVFVN K+N D VA+++ K+G+ TLHG K
Sbjct: 633 VEFIQGEEK--RKKRLNEILHSNEFAPPIIVFVNVKRNCDNVARDIQKMGFSCVTLHGSK 690
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+Q+QRE +L+ R + +LVATD+AGRGID+PDV+ V+N++M NIE YTHR+GRTGRA
Sbjct: 691 TQDQREAALKSLRDGQTEILVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRVGRTGRA 750
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
GKTGVA TFL D DV YDLKQM+ +S S +P EL +HEA++ K
Sbjct: 751 GKTGVAITFLGGEDHDVLYDLKQMISKSQISRLPDELRRHEAAQNK 796
>gi|124506289|ref|XP_001351742.1| snrnp protein, putative [Plasmodium falciparum 3D7]
gi|23504671|emb|CAD51549.1| snrnp protein, putative [Plasmodium falciparum 3D7]
Length = 1123
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/464 (55%), Positives = 341/464 (73%), Gaps = 9/464 (1%)
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYK 272
++HWS+K EEMT+RDWRIFRED I KG +P P+R W E L+ +LL+A+++ Y+
Sbjct: 660 CEKHWSQKSREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYE 719
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
P+PIQM AIP+ L+ RD+IGIAETGSGKTAAFVLPML+Y+ +LPP++ E +GPYA+V
Sbjct: 720 KPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALV 779
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+AP+RELA QI EET KFA Y + V++VGG++ E Q F +R+G E+VI TPGRL DCL
Sbjct: 780 IAPSRELAIQIYEETNKFASYCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCL 839
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK------ 446
E+ Y VLNQCNYV+LDEADRM+DMGFE V +LD +P+SNLK E++ L E+
Sbjct: 840 EKAYTVLNQCNYVILDEADRMMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAG 899
Query: 447 -RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R+YR T MFSATMPP+VERL+RKYLR P ++IG G I Q + + E +K +L
Sbjct: 900 HRLYRLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKL 959
Query: 506 QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
Q +L E+ + IVFVN KK AD+++K++ K+ Y+ LHGGK+QE RE +L F+ +
Sbjct: 960 QEIL-EMYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEF 1018
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
++LVATDVAGRGID+ V VIN+DMP +IE YTHRIGRTGRAG G+A +F+T HD+ +
Sbjct: 1019 DILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHL 1078
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
FYDLKQ LI SN+ VP ELA + ASK KPGT+ + P++N ++
Sbjct: 1079 FYDLKQFLISSNNIVPLELANNPASKVKPGTVM-QTPKKNQILY 1121
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
Query: 94 RERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHEAQL 150
+E+ELE+IK+QYLG K KK++ KPSEKFR F+F+W+ +EDTSR D N LYQN E QL
Sbjct: 449 KEKELEIIKQQYLGLNKTKKKIQKPSEKFRNIFNFEWDQSEDTSRNDSNPLYQNRLEPQL 508
Query: 151 LFGRGFRAGMDRREQKK 167
LFGRG+ AG+D REQ+K
Sbjct: 509 LFGRGYIAGIDVREQRK 525
>gi|367019066|ref|XP_003658818.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
gi|347006085|gb|AEO53573.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
Length = 707
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 318/682 (46%), Positives = 423/682 (62%), Gaps = 63/682 (9%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQK--------RRQEQQQQLLSQPQTHGRNSSDSRD- 64
KP F+ K +RE+LA E+ ++ ++K RRQ HG S D
Sbjct: 26 KPRFIPKKERERLAAEKAAKEEEERKRREESLIARRQSSTNGTNGDANGHGNGRSTPHDI 85
Query: 65 ---RERERHRRE-REEEAKARERARL----EKLAERERERELELIKEQYLG--------- 107
+ RH + + A +R RL EK AE ER+ EL + +Y+G
Sbjct: 86 PTGPKAMRHAGDGAADHGHAGKRRRLNDEEEKRAEMERKDAAEL-RARYMGPEVNQSTFS 144
Query: 108 SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK 167
+KK +KR + +F+FDW+ +DTSR + +Y + E L+ K
Sbjct: 145 AKKKRKR----TAANKFNFDWDPEDDTSRPYDPIYADRPEP--LY-------------KL 185
Query: 168 LAAKNEKEMREEIRKKEGVEEKPEEAA---ALKLKEEAADLYDTFDMR-VDRHWSEKKLE 223
+N EM +RK E + E A KL E+ + + + +HWSEKKLE
Sbjct: 186 TGYENTDEM--VLRKAEAIRRADPETGEERAKKLLEQHERVKKIAERKNFGKHWSEKKLE 243
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
EM ERDWRIF+E+F I+ KG IP PMR+W E L LL V VGY P+PIQ AAIP
Sbjct: 244 EMKERDWRIFKENFGIATKGGSIPNPMRSWEESNLPRRLLDIVHSVGYDEPTPIQRAAIP 303
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA+++APTREL QQI
Sbjct: 304 IALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEYNKNDGPYALILAPTRELVQQI 363
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCN 403
E E KFA LG VVSIVGG S+EEQ F +R G E+++ATPGRL+DCLERR V +QC
Sbjct: 364 ESEARKFADPLGFTVVSIVGGHSLEEQAFSLRNGAEIIVATPGRLVDCLERRLLVFSQCC 423
Query: 404 YVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMF 455
Y+++DEADRMID GFE + +LDA+P +N KP+ E+ E L K YR T M+
Sbjct: 424 YIIMDEADRMIDQGFEEPLTKILDALPVANEKPDTEEAENSQLMSRYLGGKDRYRQTMMY 483
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDELGD 514
+ATMPP VE++A+KYLR P +VTIG AG+A + + Q V + E ++ RLQ +L
Sbjct: 484 TATMPPLVEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFIAGEDKRKRRLQEILGSGQF 543
Query: 515 KTA-IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
K IVFVN K+N +MVAK++ G+ TLHG K+QEQRE +L R + +VLVATD+
Sbjct: 544 KPPIIVFVNIKRNCEMVAKDIKSWGFSTATLHGSKTQEQREAALASVRNGQASVLVATDL 603
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
AGRGID+ DV+ V+N++MP +IE YTHRIGRTGRAGK+GVA TFL D DV YDLKQ++
Sbjct: 604 AGRGIDVADVSLVVNFNMPSSIEAYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQII 663
Query: 634 IQSN-SPVPPELAKHEASKFKP 654
+S+ S VP EL +HEA++ KP
Sbjct: 664 SKSSISKVPEELRRHEAAQSKP 685
>gi|422294697|gb|EKU21997.1| ATP-dependent RNA helicase DDX23/PRP28 [Nannochloropsis gaditana
CCMP526]
Length = 820
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 330/723 (45%), Positives = 420/723 (58%), Gaps = 90/723 (12%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQ----KRRQEQQQQLLS------------ 50
EGG++ K FLTK QREQLAL++ QE+ A + KR + +
Sbjct: 95 EGGAHEVK--FLTKKQREQLALQKLQEKRAAEAPSVKRTGMAMKDVGKGGSAGDGGMGPP 152
Query: 51 QPQTHGRNSSDSRDRERERHRREREEEAKARERARLEKLAERERERELEL---------- 100
+P +H RDR+ RE AR RA E L
Sbjct: 153 RPGSH-------RDRDGREGSREGGWRDGARGRASDRGAREERERGGRGLSREERERERL 205
Query: 101 ----------IKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEA 148
+K+ YLG K+ K+RV+KPSEKF F FDWE +EDTSRD N LY E
Sbjct: 206 ERQRQEELQALKDHYLGKKEVKRRVVKPSEKFARIFQFDWEASEDTSRDSNPLYNQRLEV 265
Query: 149 QLLFGRGFRAGMDRREQKKL-----------------------AAKNEKEMREEIRKKEG 185
LFGRG+ AG+D REQ+K ++ ++ +EE R+
Sbjct: 266 TPLFGRGYVAGVDMREQRKTNRYLEALTLRRQEEERRAEEEAGVSRGDRRDKEEERRSF- 324
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYK-GS 244
+E+ A E A + + +HW +K LE MTERDWRIFREDF+IS + G
Sbjct: 325 MEDMRRRREAEARGMERATIG-----VLGQHWRDKSLESMTERDWRIFREDFDISMRVGR 379
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
+ P+RNW E L L + VE +G+K PSPIQ AAIP+G+ +RD+IGIAETGSGKT A
Sbjct: 380 QRVLPLRNWEEANLPASLRKTVEGMGWKEPSPIQRAAIPVGMGRRDIIGIAETGSGKTGA 439
Query: 305 FVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVG 363
F +PM+ Y LP EGP A+VMAPTRELA+QIE + G+K S VG
Sbjct: 440 FAIPMINYCLTLPAEHRTRTPEEGPLALVMAPTRELAEQIEAQVAILIEGTGLKSCSGVG 499
Query: 364 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 423
G+ IE+Q F +R+G +++I TPGRL D ++ RY VLNQCNY+VLDEADRM+DMGFE QVV
Sbjct: 500 GKPIEDQAFALREGVDILIGTPGRLKDLIDSRYLVLNQCNYIVLDEADRMVDMGFEEQVV 559
Query: 424 GVLDAMPSSNLKPENEDEELDEK--------RIYRTTYMFSATMPPAVERLARKYLRNPV 475
VLD M LK ENE EE D + ++YR T MFSATMPPAVER+AR YLR P
Sbjct: 560 AVLDTM-GGLLKSENE-EEADRQADAAQKGEQLYRVTAMFSATMPPAVERIARSYLRAPA 617
Query: 476 VVTIGTAGKA-TELISQHVVMMKESEKFSRLQRLLDE-LGDKTAIVFVNTKKNADMVAKN 533
+ IG A + I Q ++ E K + LL + IVFVN K+ D++A++
Sbjct: 618 TIKIGEANSGKNKRIEQRLIFTTEPGKRKAVVDLLTSPKKEDKFIVFVNAKRACDVLARH 677
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L++ LHGGKSQ+QRE SLE FR + VLVATDVA RG+DIPDV+HVINYDMP
Sbjct: 678 LEQTRISCGILHGGKSQDQREASLEAFRNGVFTVLVATDVAARGLDIPDVSHVINYDMPA 737
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 653
IE Y HRIGRTGRAGK G+ATT LT +D++VF+DLK L ++ VPPEL KH A++
Sbjct: 738 KIENYCHRIGRTGRAGKEGLATTLLTENDSEVFHDLKNYLESTDMKVPPELGKHAAAQQA 797
Query: 654 PGT 656
PGT
Sbjct: 798 PGT 800
>gi|323453625|gb|EGB09496.1| hypothetical protein AURANDRAFT_10388, partial [Aureococcus
anophagefferens]
Length = 589
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 292/596 (48%), Positives = 393/596 (65%), Gaps = 42/596 (7%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLF 152
E+EL LI+E YLG +K+V+KPSEKF F FDW+ +DTS D+N LY H Q L
Sbjct: 1 EKELRLIRENYLGKGPKQKKVVKPSEKFARIFQFDWDANDDTSADLNPLYARRHAVQPLL 60
Query: 153 GRGFRAGMDRREQKKL----AAKNEKEMREEIRKKE--GVE----EKPEEAAALKLKEEA 202
GRG+ AG+D REQ+K + ++K M E R++E G+ ++ E+A + +
Sbjct: 61 GRGYVAGLDMREQRKTQTFASVLSDKRMAEARRQEEDEGLARAERKRREDARKEERERLR 120
Query: 203 ADLYDTFDMRVDR--------HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWA 254
D+ + +V++ HW++K L +MT+RDWRI +EDF+I +G K P P+R W
Sbjct: 121 RDMAAETE-KVEKAALGRELLHWTDKALGDMTDRDWRIMKEDFDIRIRGGKAPLPLRFWG 179
Query: 255 EGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYIS 314
E L LL A+ GYK PSPIQ AIP+GL+ RD+IG+AETGSGKTAAF +PM+ YIS
Sbjct: 180 EADLGEPLLMAIRDAGYKEPSPIQRQAIPVGLELRDIIGVAETGSGKTAAFCIPMIRYIS 239
Query: 315 RLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFR 373
+LP + A+ GP A+VMAPTRELA QI E K ++ + V ++VGG SIE+Q F
Sbjct: 240 KLPAARIASLADDGPLALVMAPTRELATQIAGECKKLTAHMDMNVTTVVGGMSIEDQAFV 299
Query: 374 IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSN 433
+R+G E+++ TPGR+ DCL+ +Y VLNQ NYVVLDEADRMIDMGFEPQV +L+ M
Sbjct: 300 LREGVEIIVGTPGRIQDCLDTQYLVLNQANYVVLDEADRMIDMGFEPQVHSILEEM--GG 357
Query: 434 LKPENEDEELDEKRI--------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGT--AG 483
L +D E++++R+ YR T MFSATMP AVE+LA+K+LR+P +V IG +G
Sbjct: 358 LLLSEDDIEMEQQRLAVQRGEACYRITAMFSATMPSAVEKLAKKFLRHPAIVCIGDEDSG 417
Query: 484 KATELISQHVVMMKESEKFSRLQRLLDELGDKTA----IVFVNTKKNADMVAKNLDKLGY 539
K + I+QHV+ + E+ K + + +D L K A +VF N KK D +AK L G
Sbjct: 418 K-NKRIAQHVLYIAEAAKKNAV---VDILRKKKAQDKYLVFCNEKKGCDALAKVLSTAGL 473
Query: 540 RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 599
R + LHGGK+QE R+ +L ++ VLVATDVAGRG+DIPDVAHV+NYDMP IE Y+
Sbjct: 474 RSSVLHGGKTQEHRDATLAAYKAGSVTVLVATDVAGRGLDIPDVAHVVNYDMPLKIENYS 533
Query: 600 HRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPG 655
HRIGRTGRAGK GVATT LT D + YDL+Q L Q+++ +P L K+ A+ KPG
Sbjct: 534 HRIGRTGRAGKDGVATTLLTDSDEAMMYDLRQYLEQTDAQIPERLEKNPAAHAKPG 589
>gi|395333596|gb|EJF65973.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Dichomitus
squalens LYAD-421 SS1]
Length = 759
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/571 (50%), Positives = 381/571 (66%), Gaps = 35/571 (6%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT--SRDMNALYQNPHEAQLLFGR 154
+L+ I+ +YLG K K+++ K +++ +F FDW+ +DT + A+ AQ+ FGR
Sbjct: 195 DLDAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQDDTYNAETPAAIGSQRQGAQIGFGR 253
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AGMD + K E + + +E + AA + E
Sbjct: 254 GHIAGMD--DAGGAVVPGRKSGAEGMVLADPLERR--RAARTGIDE-------------- 295
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
RHWSEK L+EM ERDWRIFREDF+I+ +G +IP P+R+W E + E+L V+++GYK P
Sbjct: 296 RHWSEKSLDEMKERDWRIFREDFSIAARGGQIPYPIRSWRESAIPVEILDIVDQIGYKEP 355
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
SPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML +IS+LPP +++ GPYA+++A
Sbjct: 356 SPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLAFISKLPPFTDDIRHLGPYALILA 415
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELAQQIE ET KFA LG VSIVGG+S+EEQ F +R G E++IATPGRL D +ER
Sbjct: 416 PTRELAQQIESETKKFAGPLGFTSVSIVGGRSVEEQQFNLRSGAEIIIATPGRLKDVIER 475
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-------EKR 447
VL+QC YVV+DEADRM+++GFE + +LD +PS ++ E++ E++D +K
Sbjct: 476 HVIVLSQCRYVVMDEADRMVNLGFEADLTFILDKLPSDTMEGEDQGEQMDIDGETMIKKG 535
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
R T +FSATMPP VERLA+KYL+ P ++TIG AGKA + + Q V + EK + QR
Sbjct: 536 RNRVTTLFSATMPPPVERLAKKYLKKPAIITIGEAGKAVDTVEQRVEFVSGDEK--KKQR 593
Query: 508 LLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+L+ L IVFVN KK ADMVAK+L + G+ TLH GK+QEQRE +L+ RT
Sbjct: 594 MLEILNSGQFASPIIVFVNQKKTADMVAKDLQRAGWNAATLHSGKNQEQREAALQSLRTG 653
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
++LVATD+AGRGID+ DV VINY M IE Y HRIGRTGRAGK G A TFL+ D
Sbjct: 654 DADLLVATDLAGRGIDVQDVTLVINYQMANTIEAYVHRIGRTGRAGKQGTAITFLSNDDE 713
Query: 624 DVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
+V YDLKQ + +S S VP ELAKHEA++ K
Sbjct: 714 EVMYDLKQEISKSPVSKVPIELAKHEAAQHK 744
>gi|336367070|gb|EGN95415.1| hypothetical protein SERLA73DRAFT_162301 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379794|gb|EGO20948.1| hypothetical protein SERLADRAFT_417400 [Serpula lacrymans var.
lacrymans S7.9]
Length = 756
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 286/576 (49%), Positives = 375/576 (65%), Gaps = 48/576 (8%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE--AQLLFGR 154
+L I+ +YLG K K+++ K +++ +F FDW+ +DT + + + H AQ++FGR
Sbjct: 195 DLHAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQDDTFAEDSPVAVGTHRQGAQVMFGR 253
Query: 155 GFRAGMD-----RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTF 209
G AGMD R L M K G++E
Sbjct: 254 GRLAGMDDGGAGSRRGPALDTHLADSMERRKAAKSGLDE--------------------- 292
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
RHWS+K L+EM ERDWRIFREDF+IS +G IP P+R+W E + +L + ++
Sbjct: 293 -----RHWSDKSLDEMKERDWRIFREDFSISARGGAIPHPLRSWTESAIPEIILDVIAKI 347
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
GYK PS IQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML++IS +PP ++E GPY
Sbjct: 348 GYKEPSAIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLSFISTMPPFTDEIRHLGPY 407
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A+++APTRELAQQIE E KFA LG VSIVGG+++EEQ F +R+G E++IATPGRL
Sbjct: 408 ALILAPTRELAQQIESEARKFATPLGFHCVSIVGGRAVEEQQFNLREGAEIIIATPGRLK 467
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD----- 444
D LER VL+QC YVV+DEADRM+ +GFE ++ +LD +PS + E+ E++D
Sbjct: 468 DVLERHVLVLSQCRYVVMDEADRMVHLGFETDLLFILDKLPSETMAGEDMGEQMDVDGET 527
Query: 445 --EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
+K R T +FSATMPPAVERLARKYL+ P ++TIG AG+A + + Q V + EK
Sbjct: 528 LVKKGRTRVTTLFSATMPPAVERLARKYLKKPAIITIGEAGRAVDTVEQRVEFVSGDEK- 586
Query: 503 SRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
+ QRLL+ L IVFVN KK ADMVAK+L + G+ TLH GK+QEQRE SL+
Sbjct: 587 -KKQRLLEILNSGMYASPIIVFVNQKKTADMVAKDLSRAGWNAATLHSGKNQEQREASLQ 645
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
R+ +VLVATD+AGRGID+ DV+ VIN+ M G IE Y HRIGRTGRAGK G + TFL
Sbjct: 646 ALRSGESDVLVATDLAGRGIDVQDVSLVINFQMAGTIEAYVHRIGRTGRAGKQGTSITFL 705
Query: 619 TFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
T D +V YDLKQ + +S S VP ELAKHE+++ K
Sbjct: 706 TNDDDEVMYDLKQEISKSPVSKVPMELAKHESAQHK 741
>gi|452837778|gb|EME39720.1| hypothetical protein DOTSEDRAFT_180424 [Dothistroma septosporum
NZE10]
Length = 641
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 290/583 (49%), Positives = 383/583 (65%), Gaps = 31/583 (5%)
Query: 93 ERERELELIKEQYLG-----SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E+E E E+ K++Y+G S K+ K + + +F+F+W EDTS D N +YQ+ E
Sbjct: 50 EKEVEAEMTKQRYMGADTNTSTFSAKKKRKRTTEKKFNFEWNTEEDTSPDYNPIYQSRQE 109
Query: 148 AQLLFGRGFRAGM--DRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
FGRG G D +++ R+ +E + E A K +EE
Sbjct: 110 NSF-FGRGRLGGFTDDSTDKQAQQYAAAIAARDPEAGRERAQAILE--AERKRREEGGR- 165
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
V++HWSEKKLE M ERDWRIF+EDFNI+ KG IP PMR+W E L +L
Sbjct: 166 -----TGVEKHWSEKKLENMRERDWRIFKEDFNIATKGGSIPNPMRSWGESGLPKRILDI 220
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
V +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP ++E+
Sbjct: 221 VGQVGYTEPSAVQRAAIPIALQSRDLIGVAVTGSGKTAAFLLPLLVYISELPALNEQTSN 280
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
+GPYA+++APTRELAQQIE E KFA LG VS+VGG SIEEQ + +R G E++IATP
Sbjct: 281 DGPYAIILAPTRELAQQIEIEAKKFATPLGFTCVSLVGGHSIEEQSYNMRNGAEIIIATP 340
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--- 442
GRL+DC+ERR VL+QC Y+++DEADRMID+GFE V +LDA+P SN KP+ E+ E
Sbjct: 341 GRLVDCIERRVLVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAENSM 400
Query: 443 -----LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
L + YR T M++ATMP AVER+ARKYLR P VTIG G+A + + Q V ++
Sbjct: 401 MMSSHLGGRDRYRQTMMYTATMPAAVERIARKYLRRPAQVTIGNVGEAVDTVEQRVEFLQ 460
Query: 498 ESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
+K R +RL + L + IVFVN K+N D +A+ + ++G+ TLHG K+Q+QR
Sbjct: 461 GEDK--RKKRLGEILNSREFAPPIIVFVNVKRNCDSIAREIQRMGFSSVTLHGSKTQDQR 518
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
E +L R VLVATD+AGRGID+PDV+ V+N++M NIE YTHR+GRTGRAGKTGV
Sbjct: 519 EAALASLRDGSTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRVGRTGRAGKTGV 578
Query: 614 ATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 655
A TFL D DV YDLKQM+ +S+ S VP +L KHEA++ + G
Sbjct: 579 AITFLGNEDADVMYDLKQMISKSSISHVPEQLRKHEAAQQRTG 621
>gi|342320678|gb|EGU12617.1| Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Rhodotorula
glutinis ATCC 204091]
Length = 903
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 296/604 (49%), Positives = 376/604 (62%), Gaps = 88/604 (14%)
Query: 99 ELIKEQYLGSKKPKKRVIKPSE-----KFRFSFDWENTEDTSRD-MNALYQNPHEAQL-- 150
+L +YLG+K P KRV + + R FDW+ +DT D ++ +Y P A +
Sbjct: 325 QLNAARYLGAKAPDKRVKRNKKGPNGGPGRVDFDWDRNDDTLADEVDPIYA-PTAAPVVP 383
Query: 151 -----------------LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
LFGRG AG D + + + K K +E
Sbjct: 384 GGPAASNTPTGQSMRVTLFGRGRLAGFDA-DVENMGGKKTKGALDE-------------- 428
Query: 194 AALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
RHWSEK LEEM +RDWRIFREDF+I +G IP P+R+W
Sbjct: 429 ---------------------RHWSEKSLEEMRDRDWRIFREDFSIGARGGHIPLPLRSW 467
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
E K+ +L A+E +GYK PSPIQ AIP+GLQ RD+IGIAETGSGKTAAF +PML YI
Sbjct: 468 KESKIPQPILEAIEEIGYKEPSPIQRQAIPIGLQNRDMIGIAETGSGKTAAFTIPMLAYI 527
Query: 314 SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFR 373
+RLPP+S+EN ++GPYA+V+APTRELAQQIE ET KF LG + VSIVGG++IEEQ F
Sbjct: 528 ARLPPLSDENRSKGPYALVLAPTRELAQQIEAETNKFCRVLGYRCVSIVGGKAIEEQQFN 587
Query: 374 IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSN 433
+R G E+VIATPGRL DC+ER VL QC YVV+DEADRM+ +GFE + +LD++P SN
Sbjct: 588 MRDGAEIVIATPGRLKDCIERSVLVLAQCTYVVMDEADRMVSLGFEDVLNFILDSLPVSN 647
Query: 434 LKPEN-------------------EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
LKP++ E+E +YR T MFSATMPPAVERL +KYLR P
Sbjct: 648 LKPDSVEAEDANKMTMSLAAPVGEENEVAPSLALYRQTVMFSATMPPAVERLTKKYLRRP 707
Query: 475 VVVTIGTAGKATELISQHVVMM-KESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAK 532
VVTIG AG+A + + Q V M+ E +K SRL +L+ G IVFVN KK AD++ K
Sbjct: 708 AVVTIGVAGQAVDTVDQRVEMINSEEKKKSRLLDILNNGGFQPPMIVFVNQKKGADVLQK 767
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
+L + G+ TLH GK+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N+ M
Sbjct: 768 DLQRAGWNSVTLHSGKNQEQREAALNSIRNGENDVLVATDLAGRGIDVPDVSLVVNFQMS 827
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV---PPELAKHEA 649
IE Y HRIGRTGRAGKTG A TFL+ D ++FYDLKQ + S SPV P+LA+H A
Sbjct: 828 NTIEAYIHRIGRTGRAGKTGTAITFLSDTDEELFYDLKQEI--SKSPVSKLSPDLARHPA 885
Query: 650 SKFK 653
++ K
Sbjct: 886 AQSK 889
>gi|443924941|gb|ELU43883.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Rhizoctonia
solani AG-1 IA]
Length = 718
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 291/571 (50%), Positives = 379/571 (66%), Gaps = 54/571 (9%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGF 156
+L I+ +YLG K K+++ K +++ +F FDW+ EDT + ++FGRG
Sbjct: 173 DLSAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEQEDTG-------STQQSSAVMFGRGH 224
Query: 157 RAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRH 216
AGM+ +++A + KE R R G +E RH
Sbjct: 225 LAGMEDGGGERMA--DAKERRAAAR--HGADE--------------------------RH 254
Query: 217 WSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSP 276
WS+K L EM ERDWRIFREDF+I+ +G IP P+R+W E ++ +L + +GY+ PSP
Sbjct: 255 WSDKPLNEMKERDWRIFREDFSIACRGGNIPFPLRSWTESEIPQAILDVISAIGYEEPSP 314
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPT 336
IQ AIP+GLQ RDVIGIAETGSGKTA+FV+PML YI LP + + N GPYA+++APT
Sbjct: 315 IQRQAIPIGLQNRDVIGIAETGSGKTASFVIPMLVYIQSLPALDDVNRHLGPYALILAPT 374
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRY 396
RELAQQIE ET KFA LG K VSIVGG+++EEQ F +R+G E++IATPGRL D ++R
Sbjct: 375 RELAQQIEAETRKFATPLGYKCVSIVGGRAVEEQQFNLREGAEIIIATPGRLKDVIDRHV 434
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-----------E 445
VL+QC YVV+DEADRM+ +GFE + +LDA+P+ +LK E+E +LD +
Sbjct: 435 LVLSQCTYVVMDEADRMVHLGFEADLTFILDALPAESLKVEDE-MDLDGRHGVVRDSSGQ 493
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSR 504
K R T +FSATMPPAVERLARKYLR P V+TIG AG+A E + Q V ++ + +K +R
Sbjct: 494 KGKTRVTTLFSATMPPAVERLARKYLRRPAVITIGEAGRAVESVEQRVEFVIGDDKKKAR 553
Query: 505 LQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L +L+ G IVFVN KK ADMVAK+L + G +TLH GK+QEQRE +L+ RT
Sbjct: 554 LLDILNNGGFQPPIIVFVNQKKTADMVAKDLSRAGV-TSTLHSGKNQEQREAALQALRTG 612
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+VLVATD+AGRGID+ DV+ VINY M IE Y HRIGRTGRAGKTGVA TFLT D
Sbjct: 613 EADVLVATDLAGRGIDVQDVSLVINYQMANTIEAYVHRIGRTGRAGKTGVAITFLTNDDD 672
Query: 624 DVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
+V YDLKQ + +S S VPPELA+HEA++ K
Sbjct: 673 EVMYDLKQEISKSPISKVPPELARHEAAQQK 703
>gi|310790707|gb|EFQ26240.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 733
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/687 (45%), Positives = 432/687 (62%), Gaps = 63/687 (9%)
Query: 17 FLTKAQREQLALERRQEQIAQQ--------KRRQEQQQQLLSQPQTHGRNSSDSRDRER- 67
F+ K +RE+ A E+ +++ ++ +++ E +++ +S+ N + + R
Sbjct: 32 FIPKKERERQAAEKAKQEEEERKRKAEEDARKKAEIERKWVSEANGSAVNGAQNGAGGRI 91
Query: 68 -----ERHRRE-----------REEEAKARERARLEKLAERERERELELIKEQYLGSKKP 111
H E ++E+ KA + EK + E EL++ +YLG +
Sbjct: 92 PTGPKAMHSTEGGRGPGGRGRDKQEQRKASTKDGKEK--KSAEAIEAELLRNRYLGPEVN 149
Query: 112 KKRVIKPSEKFR----FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKK 167
K+ +K + F F+W+ EDT+ D + +Y++ + G +G E ++
Sbjct: 150 KQSNFSVKKKRKRATEFKFEWDAEEDTTLD-DPIYESNSTTLKSYTFGSLSGEYNEEAEE 208
Query: 168 LAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY---DTFDMRVDR-----HWSE 219
+A R+ +EE+ E + KE D Y + R DR HW++
Sbjct: 209 IAR----------RRARMIEERDREFGKQRAKEFMEDFYRARERAKERADRSGLGKHWTK 258
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K L EM ERDWRIF+EDF I+ KG +IP PMR+W E L +LL V+RVGYK+PSPIQ
Sbjct: 259 KALSEMRERDWRIFKEDFGIATKGGQIPNPMRSWEESGLPRQLLNIVDRVGYKDPSPIQR 318
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
AAIP+ LQ RD+IG+A TGSGKTAAF+LP+LTYI LPP++E N+ +G YA+++APTREL
Sbjct: 319 AAIPIALQARDLIGVAVTGSGKTAAFLLPLLTYIQDLPPLTEINKNDGAYALILAPTREL 378
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
QQIE E KFA LG VVSIVGG S+EEQ + +G E+++ATPGRL+DC+ERR VL
Sbjct: 379 VQQIETEAHKFADPLGFNVVSIVGGHSLEEQVHALSRGAEIIVATPGRLVDCIERRLLVL 438
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---LDEKRI-----YRT 451
+QC YV++DEADRMID+GFE V +LDA+P SN KP+ +D E L +K + YR
Sbjct: 439 SQCCYVIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAENAQLMQKYLGATDRYRQ 498
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLD 510
T M++ATMPP VE++ARKYLR P +VTIG AG+A E + Q V + E +K RLQ +L
Sbjct: 499 TMMYTATMPPTVEKIARKYLRRPAIVTIGNAGEAVETVEQRVEFVSGEDKKKKRLQEILG 558
Query: 511 ELGDKT--AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVL 568
GD IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L R + VL
Sbjct: 559 -AGDFAPPIIVFVNIKRNCDAVARDVQRMGYSAVTLHGSKTQEQREAALASVRNGQTQVL 617
Query: 569 VATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYD 628
VATD+AGRGID+PDV+ VIN++M NIE YTHRIGRTGRAGK+GVA TFL D+D+FYD
Sbjct: 618 VATDLAGRGIDVPDVSLVINFNMATNIESYTHRIGRTGRAGKSGVAITFLEQSDSDLFYD 677
Query: 629 LKQMLIQSN-SPVPPELAKHEASKFKP 654
LKQML +S S VP EL +HEA++ KP
Sbjct: 678 LKQMLSKSAISRVPEELRRHEAAQQKP 704
>gi|346322626|gb|EGX92225.1| DEAD/DEAH box helicase, putative [Cordyceps militaris CM01]
Length = 744
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/701 (44%), Positives = 423/701 (60%), Gaps = 76/701 (10%)
Query: 15 PLFLTKAQREQLALE--------RRQEQIAQQKRRQEQQQQ------------------L 48
P F+ KAQRE+LA E +R++ +R E +++ +
Sbjct: 22 PRFIPKAQRERLAAEQAKQDEELKRKKASGDASKRAEDEKKWEDRAASSKTTNKGTSNGV 81
Query: 49 LSQPQT-HGRNSSD-------SRDRERERHRREREEEAKARERARLEKLAERERERELEL 100
+ P+T +G SS R R + K ++A EK + E E EL
Sbjct: 82 PTGPRTMNGVGSSGPRGRDDKDRRDGRGGKSGKEGGGDKKGKKANAEKRSAEEIE--AEL 139
Query: 101 IKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFG 153
++ +YLG + +K+ ++ +EK +F+FDW+ EDTSR + Y G
Sbjct: 140 LRSRYLGPEVNQHSNFSAQKKRMRTTEK-KFNFDWDAGEDTSRAEDGAYSG--------G 190
Query: 154 RGFRAGMDRREQKKLAAKNEKEMREEIRKKE-GVEEKPEEAAALKLKEEAADLYDTFDMR 212
G R + + +KE E +K+ +E++ E + + D Y D
Sbjct: 191 AGVRG----ISLAGVGGEFDKEAEERAKKRARMIEQRDTEHGRERAQGIMEDFYRARDKA 246
Query: 213 VD--------RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
D R W+EK+L+EM ERDWRIF+EDF IS KG +P PMRNW E L P LL
Sbjct: 247 RDRAERTGLGRRWNEKRLDEMRERDWRIFKEDFGISTKGGTLPNPMRNWKESGLPPRLLA 306
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+E VGY+ P+PIQ AAIP+ L RD+IG+A TGSGKTAAF+LP+L YIS LPP+ E N+
Sbjct: 307 IIEHVGYEEPTPIQRAAIPIALLARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLGETNK 366
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GPYA+++APTREL QQIE+E KF LG + VSIVGG S+EEQ + +R G E+++AT
Sbjct: 367 NDGPYALILAPTRELVQQIEKEAKKFGEPLGFRCVSIVGGHSLEEQAYALRNGAEIIVAT 426
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 442
PGRL+DC+ERR VL+QC YV++DEADRMIDMGFE V +LDA+P SN KP+ ++ E
Sbjct: 427 PGRLVDCIERRLLVLSQCCYVIMDEADRMIDMGFEEPVNTILDALPVSNEKPDTDEAEDG 486
Query: 443 ------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
+ EK YR T MF+ATMPP VER+A+KYLR P + IG AG+A E + Q V +
Sbjct: 487 RLMQRYVGEKDRYRQTMMFTATMPPLVERIAKKYLRRPAMAMIGNAGEAVETVEQQVEFV 546
Query: 497 K-ESEKFSRLQRLL-DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
E + RL R+L + IVFVN K+N D VAK++ +G+ LHG K+QEQRE
Sbjct: 547 SGEDARKKRLARILASNMFAPPIIVFVNIKRNCDAVAKDVRSMGWSAVPLHGSKTQEQRE 606
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L R+ VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+G A
Sbjct: 607 AALAAVRSGETQVLVATDLAGRGIDVPDVSLVVNFNMALSIESYTHRIGRTGRAGKSGTA 666
Query: 615 TTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
TFL D DV YDL+QML +S+ S VP EL KHEA++ +P
Sbjct: 667 ITFLGNEDADVLYDLRQMLSKSSISKVPEELKKHEAAQTRP 707
>gi|402225357|gb|EJU05418.1| Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Dacryopinax sp.
DJM-731 SS1]
Length = 728
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 290/567 (51%), Positives = 381/567 (67%), Gaps = 36/567 (6%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
E +L I+ +YLG K K++V K S++ +F FDW+ EDT D A ++FGR
Sbjct: 175 EDDLSAIRSRYLGVDKKKRKVRKMSDR-KFIFDWDEQEDTG-DGAETSTPAVRAGVMFGR 232
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AGMD + G +EK A ++ ++ A D +
Sbjct: 233 GHLAGMD----------------DGAHGGRGQDEK--HADPMERRQAARHTVD------E 268
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
RHW+EK L EM +RDWRIFREDF+I+ +G IP P+R+W E + +L + ++GY+ P
Sbjct: 269 RHWTEKALPEMKDRDWRIFREDFSIAARGGHIPLPLRSWQESIIPVPILDIIAKIGYEEP 328
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
SPIQ AIP+GLQ RD+IG+AETGSGKTAAFV+PML YI +LPP++++N GPYA+++A
Sbjct: 329 SPIQRQAIPIGLQYRDLIGVAETGSGKTAAFVIPMLVYIGKLPPLTDDNRHLGPYALILA 388
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELAQQIE E KFA LG K VSIVGG+++EEQ F +R+G E+VIATPGRL D L+R
Sbjct: 389 PTRELAQQIESEARKFAAPLGFKTVSIVGGRAVEEQAFNLREGAEIVIATPGRLKDVLDR 448
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD---EKRIYRT 451
VL+QC Y+V+DEADRM+++GFE + +LDA P+ LKPE+E ++D + R
Sbjct: 449 HVLVLSQCTYIVMDEADRMVNLGFEADLNYILDACPTEFLKPEDESADVDTDGKNAKTRV 508
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMPPAVERLARKYLR P +TIG AG+A + + Q V + EK + QR+L+
Sbjct: 509 TTLFSATMPPAVERLARKYLRRPATITIGEAGRAVDTVEQRVEFVHGDEK--KKQRMLEI 566
Query: 512 LG----DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L + IVFVN KK ADMVA+++ + G+ TTLH GK+QEQRE +L R+ + +
Sbjct: 567 LNTGGFEAPIIVFVNQKKTADMVARDIQRAGWSATTLHSGKNQEQREAALADLRSGKAAI 626
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
LVATD+AGRGID+ DV+ VINY M IE Y HRIGRTGRAGK GVA TFLT D +V Y
Sbjct: 627 LVATDLAGRGIDVQDVSLVINYQMANTIEAYVHRIGRTGRAGKQGVAITFLTNDDDEVMY 686
Query: 628 DLKQMLIQSN-SPVPPELAKHEASKFK 653
DLKQ + +S S VPPELAKHEA++ K
Sbjct: 687 DLKQEISKSPVSKVPPELAKHEAAQQK 713
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 12 NKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ 47
KP FLTKA+R++LALERR++ I +QK ++E+ Q
Sbjct: 24 TSKPKFLTKAERQKLALERREQDIKEQKDKEERSTQ 59
>gi|67522354|ref|XP_659238.1| hypothetical protein AN1634.2 [Aspergillus nidulans FGSC A4]
gi|40745598|gb|EAA64754.1| hypothetical protein AN1634.2 [Aspergillus nidulans FGSC A4]
Length = 767
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/682 (45%), Positives = 415/682 (60%), Gaps = 64/682 (9%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQ------------EQQQQLLSQPQTHGRN--- 58
+P F++KA+RE+LALE+R +++ Q+RR + + P R+
Sbjct: 89 RPKFMSKAERERLALEKRAKEVDAQRRRTNGTPNGVDGMDLDTPSRGFRTPNGDSRSIPT 148
Query: 59 ------SSDSRDRERERHRREREEEAKARERARLEKL--AERERERELELIKEQYLGSKK 110
+ D R R + + +++K E E + LIK++Y+G+ +
Sbjct: 149 GPRAMRNGDGPTPTGPAAMRSRNDSGTTKSDKKVDKRFNEEDEAAAQAALIKQRYMGADQ 208
Query: 111 PK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQK 166
K+ K + +F+F+W EDTS D N LYQ+ HEA FGRG AG
Sbjct: 209 TSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANF-FGRGRLAGFGDDVAD 267
Query: 167 KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMT 226
+A K K + + R+ + A L+ E ++ ++D+HWSEKKLE M
Sbjct: 268 SVAKKYAKALEDRDREAGSIR------AREILEMERRRREESTRNQLDKHWSEKKLEHMR 321
Query: 227 ERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGL 286
ERDWRIF+EDFNI+ KG +P PMR+W E L LL V+RVGYK P+PIQ AAIP+ +
Sbjct: 322 ERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAM 381
Query: 287 QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVMAPTRELAQQIE 344
Q RD+IG+A TGS LP I E + +GPYA+V+APTRELAQQIE
Sbjct: 382 QSRDLIGVAVTGS---------------ELPRIDEFEWRKNDGPYAIVLAPTRELAQQIE 426
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+ERR VL+QC Y
Sbjct: 427 IEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCY 486
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFS 456
V++DEADRMID+GFE V +LDA+P +N KP+ E+ E L K YR T M++
Sbjct: 487 VIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYRQTMMYT 546
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGD- 514
ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ E ++ RL +L GD
Sbjct: 547 ATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEILSS-GDF 605
Query: 515 -KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L R +VLVATD+
Sbjct: 606 RPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDL 665
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
AGRGID+PDV+ VIN++M +IE YTHRIGRTGRAGK+GVA TFL D DV YDLKQML
Sbjct: 666 AGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQML 725
Query: 634 IQSN-SPVPPELAKHEASKFKP 654
I+S S VP EL KHEA++ KP
Sbjct: 726 IKSPISRVPEELRKHEAAQSKP 747
>gi|452980378|gb|EME80139.1| hypothetical protein MYCFIDRAFT_177115 [Pseudocercospora fijiensis
CIRAD86]
Length = 1001
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 290/571 (50%), Positives = 378/571 (66%), Gaps = 26/571 (4%)
Query: 99 ELIKEQYLGSKKPKKRV-----IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFG 153
+L+KE+Y+G+ K + + +F+F+W EDTS D N LY E FG
Sbjct: 232 QLMKERYMGADTNTSTFSALKKRKRTTEKKFNFEWNAEEDTSPDYNPLYATRSENNF-FG 290
Query: 154 RGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRV 213
RG G A K + + E R E +++ AA L+ E + +
Sbjct: 291 RGRLGGFADDTTDAQARKYAQAIAE--RDPEAGKQR----AAEILEMERRRREEGGRNGI 344
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D+HWSEKKLE M ERDWRIF+EDFNI+ KG IP PMR W E L +L VE+VGYK
Sbjct: 345 DKHWSEKKLESMRERDWRIFKEDFNIATKGGSIPNPMRRWDESGLPKRILDIVEQVGYKE 404
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP ++E + +GPYA+++
Sbjct: 405 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLCYISELPALNEVTKNDGPYAIIL 464
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KFA LG VS+VGG +IEEQ + +R G E++IATPGRL+DC+E
Sbjct: 465 APTRELAQQIEIEAKKFATPLGFTCVSLVGGHAIEEQSYNMRDGAEIIIATPGRLVDCIE 524
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---------LD 444
RR VL+QC YV++DEADRMIDMGFE V +LDA+P SN KP+ ++ E
Sbjct: 525 RRVLVLSQCCYVIMDEADRMIDMGFEEPVNKILDALPVSNEKPDTDEAENASAMSIHLGG 584
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFS 503
E+ YR T M++ATMP AVER+ARKYLR P VTIG G+A + + Q V ++ E ++
Sbjct: 585 ERGRYRQTMMYTATMPAAVERIARKYLRRPAQVTIGNIGEAVDTVEQRVEFIQGEDKRKK 644
Query: 504 RLQRLLDELGD--KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
R+ +L+ G+ I+FVN K+ D+VA+++ K+G+ TLHG K+Q+QRE +L R
Sbjct: 645 RINEILNS-GEFQPPIIIFVNVKRGCDVVARDVQKMGFSSVTLHGSKTQDQREAALASLR 703
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+ +VLVATD+AGRGID+ DV+ VIN++M NIE YTHRIGRTGRAGK GVA TFL
Sbjct: 704 SGTTDVLVATDLAGRGIDVSDVSLVINFNMATNIESYTHRIGRTGRAGKQGVAITFLGNE 763
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
D DV YDLKQM+ +S S VP EL KHEA++
Sbjct: 764 DADVMYDLKQMISKSAISRVPEELRKHEAAQ 794
>gi|296810762|ref|XP_002845719.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Arthroderma
otae CBS 113480]
gi|238843107|gb|EEQ32769.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Arthroderma
otae CBS 113480]
Length = 801
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/582 (50%), Positives = 381/582 (65%), Gaps = 52/582 (8%)
Query: 97 ELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLL 151
+++LIK++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN EA
Sbjct: 221 QVQLIKQRYMGADQRSSFSAKKKRRRTTER-KFNFEWNAEEDTSPDYNPLYQNRSEANF- 278
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE----EAADLYD 207
FGRG AG ++A K R +E++ EA +++ +E E +
Sbjct: 279 FGRGRLAGF----ADEVADDTVK------RYARALEDRDLEAGSVRAREILEMERRRKEE 328
Query: 208 TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
+ +D HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR W+E L LL ++
Sbjct: 329 SGRNAIDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSLPNPMRAWSESNLPKRLLDIID 388
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEA 325
VGYK PSPIQ AIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LP + E
Sbjct: 389 SVGYKEPSPIQRVAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSLPRLDEFEWRRN 448
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
+GPYA+++APTRELAQQIE E +KFA L VVSIVGG S+EEQ + +R G E++IATP
Sbjct: 449 DGPYAIILAPTRELAQQIEIEAMKFAAPLNFNVVSIVGGHSLEEQAYNLRNGAEIIIATP 508
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--- 442
GRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E
Sbjct: 509 GRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAENAQ 568
Query: 443 -----LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
+ K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V +
Sbjct: 569 AMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNVGEAVDTVEQRVEFVA 628
Query: 498 ESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
+K R +RL D L + IVFVN K+N D VA+++ +G+ TLHG K+QEQR
Sbjct: 629 GEDK--RKKRLADILTSREYRPPIIVFVNIKRNCDAVARDIKHMGFSAVTLHGSKTQEQR 686
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
E +L R +VLVATD+AGRGID+PD YTHRIGRTGRAGK+GV
Sbjct: 687 EAALASVRNGSTDVLVATDLAGRGIDVPD--------------SYTHRIGRTGRAGKSGV 732
Query: 614 ATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
A TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 733 AITFLGNEDNDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 774
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 12/59 (20%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSR 63
DE S KP FL+KAQRE++ALE+R +++ +R ++ QT+G + SDSR
Sbjct: 93 ADEAAS---KPKFLSKAQREKIALEKRMKEVDSGRR---------AKTQTNGSSGSDSR 139
>gi|320589197|gb|EFX01659.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 734
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 285/587 (48%), Positives = 385/587 (65%), Gaps = 44/587 (7%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFR----FSFDWENTEDTSRDMNALYQNPHEAQLLF 152
E + ++E+YLG + K ++ R F F W++ EDT L
Sbjct: 146 EFDRMRERYLGPDRSKSTFTVKKKRRRGAQEFKFGWDDEEDTRN--------------LA 191
Query: 153 GRGFRAGMDRREQKKLAAKN--------EKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
R D++ +L +KN E+ E ++ V + +E + ++ D
Sbjct: 192 DEKARMDADKQYIPRLTSKNMFNVDHREEQFEMEALKNANYVRKTDKEQGEERARQIMDD 251
Query: 205 LYDTFD-----MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLT 259
Y + D +R +HWSEKKL+EM ERDWRIF+EDF I+ +G IP PMRNW E L
Sbjct: 252 YYRSRDFRNRSLRNMKHWSEKKLDEMRERDWRIFKEDFGIATRGGSIPDPMRNWRESPLP 311
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
P LL VE VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI LPP+
Sbjct: 312 PRLLDVVEAVGYTEPTPIQRAAIPIALQGRDLIGVAVTGSGKTAAFLLPLLVYIKELPPL 371
Query: 320 SEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
E ++ +GPYA+++APTRELAQQIE E KFA G VVSIVGG S+EEQ + +R G E
Sbjct: 372 DEISKNDGPYALILAPTRELAQQIESEARKFATPFGYTVVSIVGGHSLEEQAYALRNGAE 431
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
+V+ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE + +LDAMP++N KP+ +
Sbjct: 432 IVVATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEDPLNKILDAMPTANEKPDTD 491
Query: 440 DEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQ 491
+ E L K YR T M++ATMPP VE++A++YLR P +VTIG G+A E + Q
Sbjct: 492 EAEDARAMTQYLGGKIRYRETMMYTATMPPVVEKIAKRYLRRPAIVTIGNVGEAVETVEQ 551
Query: 492 HVVMMK-ESEKFSRLQRLLDELGDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
V + E + RLQ +L + G A IVFVN K+N +MVAK++ ++G+ TLHG K
Sbjct: 552 RVEFVSGEDRRKKRLQEIL-QSGQFAAPIIVFVNIKRNCEMVAKDVRQMGFTTVTLHGSK 610
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+Q+QRE +L+ R + +VLVATD+AGRGID+ DV+ VIN++M ++E YTHRIGRTGRA
Sbjct: 611 TQDQREAALQALRQGKADVLVATDLAGRGIDVADVSLVINFNMATSVEQYTHRIGRTGRA 670
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GK+GVA TFL D+DV YDLKQM+ +S+ S VP EL +HEA++ KP
Sbjct: 671 GKSGVAITFLGGEDSDVLYDLKQMISKSSISKVPDELRRHEAAQQKP 717
>gi|390598082|gb|EIN07481.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 752
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 297/581 (51%), Positives = 380/581 (65%), Gaps = 49/581 (8%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ----L 150
E E+ I+ +YLG K K+++ K +++ +F FDW+ +DT ++A P E Q +
Sbjct: 184 ESEISAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDEGDDT---LSASGPQPLELQNRAGV 239
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
+FGRG AGMD A ++ A AL+ + A D
Sbjct: 240 MFGRGHLAGMDDGGGTGAGAGTNGKV-------------DASADALERRRAAKGAAD--- 283
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
+RHWSEKKLEEM ERDWRIFREDF+I+ +G +IP P+R+W E + ++L V+ +G
Sbjct: 284 ---ERHWSEKKLEEMRERDWRIFREDFSIAARGGQIPHPLRSWEESDIPAQILEIVDSIG 340
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYA 330
YK PSPIQ AIP+GLQ RDVIGIAETGSGKTAAFV+PML +IS+LP +EEN GPYA
Sbjct: 341 YKEPSPIQRQAIPIGLQNRDVIGIAETGSGKTAAFVIPMLAFISKLPAFTEENRHLGPYA 400
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
++MAPTRELAQQIE E KFA LG K VSIVGG+++EEQ F +R+G E++IATPGRL D
Sbjct: 401 LIMAPTRELAQQIESEARKFATPLGYKCVSIVGGRAVEEQQFNLREGAEIIIATPGRLKD 460
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE--ELDE--- 445
LER VL+QC YVV+DEADRM+++GFE ++ +LD +PS + E E+DE
Sbjct: 461 VLERHVLVLSQCRYVVMDEADRMVNLGFEADLLFILDKLPSEAMAGEESTTAMEVDEEGG 520
Query: 446 ------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKES 499
K R T +FSATMPP VER+A+KYLR P VVTIG AG+A + + Q V +
Sbjct: 521 TNVVVTKGRTRVTTLFSATMPPPVERIAKKYLRKPAVVTIGEAGRAVDTVEQRVEFVSGD 580
Query: 500 EKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
EK + Q++L+ L IVFVN KK ADMVAK+L + G+ TLH GK+QEQRE
Sbjct: 581 EK--KKQKMLEILNSNQYAPPIIVFVNQKKTADMVAKDLQRAGWSAATLHSGKNQEQREA 638
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+L+ R ++LVATD+AGRGID+PDV VINY M IE Y HRIGRTGRAGK G A
Sbjct: 639 ALQSLRDGHADILVATDLAGRGIDVPDVTLVINYQMANTIEAYVHRIGRTGRAGKQGTAI 698
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPV---PPELAKHEASKFK 653
TFLT D +V YDLKQ + S SPV P ELA+HEA++ K
Sbjct: 699 TFLTNEDAEVMYDLKQEI--SKSPVSKMPVELARHEAAQHK 737
>gi|260823718|ref|XP_002606227.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
gi|229291567|gb|EEN62237.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
Length = 564
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 276/515 (53%), Positives = 363/515 (70%), Gaps = 18/515 (3%)
Query: 91 ERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQL 150
E+++E+E+ IKE+YLG K K+RV + +++ +F FDW EDTS D N LY+ H Q+
Sbjct: 53 EKDKEKEINAIKERYLGIIKKKRRVRRLNDR-KFVFDWAADEDTSVDYNPLYKERHCVQM 111
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
FGRG AG+D + Q K +K E+ E+ R KE EK +E L K + +L +D
Sbjct: 112 -FGRGHIAGIDLKAQIKDQSKFYGELMEQRRTKE---EKDQEIKRLN-KVKQRELKQKWD 166
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
DRHW++K LEEM ERDWRIFRED++I+ KG +IP P+R W E LT E+ ++ +G
Sbjct: 167 ---DRHWTQKSLEEMIERDWRIFREDYSITTKGGRIPNPLRTWKEASLTDEIDSIIKDLG 223
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPY 329
YK P+PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L +I LP I +A+ GPY
Sbjct: 224 YKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLIWIESLPKIVRNEDADQGPY 283
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A+++APTRELAQQIEEET+KF LGI+ V+++GG S E+QGF++R GCE+VIATPGRLI
Sbjct: 284 AIILAPTRELAQQIEEETLKFGRRLGIRTVAVIGGLSREDQGFKLRMGCEIVIATPGRLI 343
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE------- 442
D LE RY VL+QC YVV+DEADRMIDMGFEP V +L+ +P +N KP+ E+ E
Sbjct: 344 DVLENRYLVLSQCTYVVMDEADRMIDMGFEPDVQKILEYLPVTNQKPDTEEAEDVEKLKA 403
Query: 443 -LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
K YR T MF+ATMPP VERLAR YLR P VV IG+AGK TE Q V ++KE EK
Sbjct: 404 NFSTKNKYRQTVMFTATMPPQVERLARSYLRRPAVVYIGSAGKPTERTQQVVYLVKEGEK 463
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
++L+ +L+ + I+FVN KK D++A++L+K+G+ TLHGGK QEQRE +L +
Sbjct: 464 KNKLKEILNRGIEPPIIIFVNQKKGCDVLARSLEKMGFNACTLHGGKGQEQREFALNNLK 523
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
++LVATDVAGRGIDI DV+ VINYDM NIE
Sbjct: 524 QGAKDILVATDVAGRGIDIQDVSMVINYDMSKNIE 558
>gi|389584149|dbj|GAB66882.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium cynomolgi
strain B]
Length = 1104
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 254/457 (55%), Positives = 334/457 (73%), Gaps = 8/457 (1%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
++HWSEKK EEMT+RDWRIFRED I KG +P P+R W E L+ +LL+A+++ Y+
Sbjct: 639 NKHWSEKKREEMTDRDWRIFREDNEIYIKGGIVPAPIRRWEESNLSSDLLKAIKKAKYEK 698
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQM AIP+ L+ RD+IGIAETGSGKTAAFVLPML Y+ +LPP++ E +GPYA+++
Sbjct: 699 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALII 758
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
AP+RELA QI +ET KFA Y + V++VGG++ E Q F +R+G E++I TPGR+ DCLE
Sbjct: 759 APSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIQDCLE 818
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK------- 446
+ Y VLNQCNYV+LDEADRM+DMGFE V +LD +P+SNLK E++ L E+
Sbjct: 819 KAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKIPTSNLKSEDDALALQEEMMAKAGH 878
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
R+YR T MFSATMPPAVERL+RKYLR P ++IG G I Q + E +K +LQ
Sbjct: 879 RLYRLTQMFSATMPPAVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFTTEGKKKQKLQ 938
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
LL+E + IVFVN KK AD++AK++ K+ +R LHGGK+QE RE +L F+ ++
Sbjct: 939 ELLEEY-EAPIIVFVNQKKVADIIAKSISKMKFRAIALHGGKAQELREQTLNSFKNGDFD 997
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+LVATDVAGRGID+ V VIN+DMP +IE YTHRIGRTGRAG G+A +F+T D+ +F
Sbjct: 998 ILVATDVAGRGIDVQGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFVTEQDSHLF 1057
Query: 627 YDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPR 663
YDLKQ LI SN+ VP ELA + AS+ KPG++ P +
Sbjct: 1058 YDLKQFLISSNNIVPMELANNPASRVKPGSVMHAPKK 1094
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 3/80 (3%)
Query: 91 ERERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHE 147
+ +RE+ELE IK+QYLG K KK++ KPSEKFR F+F+W+ +EDTSR D N LYQN E
Sbjct: 423 DSQREKELETIKQQYLGLNKKKKKMQKPSEKFRNIFNFEWDQSEDTSRNDTNPLYQNRLE 482
Query: 148 AQLLFGRGFRAGMDRREQKK 167
QLLFGRG+ AG+D REQ+K
Sbjct: 483 PQLLFGRGYIAGIDVREQRK 502
>gi|221504668|gb|EEE30341.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 522
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/447 (58%), Positives = 329/447 (73%), Gaps = 8/447 (1%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HW+ KK EEM ERDWRIFREDF I KG ++P P+R WAE L EL+ AV+ Y P+
Sbjct: 66 HWTTKKREEMNERDWRIFREDFEIYIKGGRVPPPIRTWAESALPWELIEAVKHANYDRPT 125
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAP 335
PIQM AIP+ L+QRD+IGIAETGSGKTAAFVLPMLTY+ LPP++E+ +GPYA+++AP
Sbjct: 126 PIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVKGLPPLNEDTGQDGPYALILAP 185
Query: 336 TRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
+RELA QI+EET KFA + + V++VGG+S E Q F++R+G E+VI TPGR+ DCLE+
Sbjct: 186 SRELALQIDEETQKFASFCKCQTVAVVGGRSAETQAFQLRRGAEIVIGTPGRVKDCLEKA 245
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE----DEELDEK---RI 448
Y VLNQCNYVVLDEADRMIDMGFE V +LD +P+SNLK +E +E+ K R+
Sbjct: 246 YTVLNQCNYVVLDEADRMIDMGFEEIVNFILDQIPTSNLKSNDEALILQQEMQAKAGHRL 305
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRL 508
YR T MFSATMPPAVERLARKYLR P ++IG G I Q V + E+ K RLQ +
Sbjct: 306 YRLTQMFSATMPPAVERLARKYLRQPSYISIGDPGAGKRAIEQRVEFVPEARKKQRLQDV 365
Query: 509 LDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVL 568
L E +VFVN KK+AD +AK L KLGY +LHGGK+QE RE +L F+ ++VL
Sbjct: 366 L-ENATPPVMVFVNQKKSADALAKVLGKLGYSACSLHGGKAQENREAALSSFKEGSHDVL 424
Query: 569 VATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYD 628
VATDVAGRGID+ V V+N+DMP +IE YTHRIGRTGRAG+ G+A +FLT D+ +FYD
Sbjct: 425 VATDVAGRGIDVEGVQLVVNFDMPKDIEAYTHRIGRTGRAGRKGLAISFLTEEDSGIFYD 484
Query: 629 LKQMLIQSNSPVPPELAKHEASKFKPG 655
LKQ+L+ +N+ VP ELA H A+K K G
Sbjct: 485 LKQLLVSTNNIVPLELAHHPAAKAKGG 511
>gi|426200230|gb|EKV50154.1| hypothetical protein AGABI2DRAFT_216556, partial [Agaricus bisporus
var. bisporus H97]
Length = 747
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/573 (49%), Positives = 378/573 (65%), Gaps = 38/573 (6%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN--ALYQNPHEAQLLF 152
+ +L I+ +YLG K K+++ K +++ +F FDW+ +DT + + A+ N AQ++F
Sbjct: 184 DNDLTAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDAQDDTFAEDSPVAVGSNRQGAQIMF 242
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR 212
GRG AGMD +R+ G + + K + D
Sbjct: 243 GRGHLAGMD------------DNGGPAVRRMPGGDNLADAMERRKATKVGID-------- 282
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYK 272
+RHW++K L EM ERDWRIFREDF+IS +G IP P+R+W E ++ +L ++R+GYK
Sbjct: 283 -ERHWTDKPLVEMKERDWRIFREDFSISARGGNIPHPLRSWRESQIPESILECIDRIGYK 341
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
PSPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML +I LP +++N GPY+++
Sbjct: 342 EPSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLAFIGNLPLFTDDNRHLGPYSLI 401
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KFA LG K VSIVGG+++EEQ F +R+G E+VIATPGRL D +
Sbjct: 402 LAPTRELAQQIESEARKFAGPLGYKCVSIVGGRAVEEQQFNLREGAEIVIATPGRLKDVI 461
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-------E 445
ER VL+QC YVV+DEADRM+++GFE + +LDA+P+ ++ E+ E++D +
Sbjct: 462 ERHVLVLSQCRYVVMDEADRMVNLGFEADLTFILDALPAETMQGEDPGEQMDVDGETLVK 521
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
K R T +FSATMP AVERLARKYL+ P V+TIG AG+A + + Q V + EK +
Sbjct: 522 KGRTRVTTLFSATMPAAVERLARKYLKKPAVITIGEAGRAVDTVEQRVEFVGGDEK--KK 579
Query: 506 QRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
R+L+ L IVFVN KK ADMVAK+L + G+ TLH GK+QEQRE SL+ R
Sbjct: 580 MRILEILNSNQYSPPIIVFVNQKKTADMVAKDLSRGGWNAATLHSGKNQEQREASLQSLR 639
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+VLVATD+AGRGID+ DV+ VIN+ M IE Y HRIGRTGRAGK G + TFLT
Sbjct: 640 NGESDVLVATDLAGRGIDVQDVSLVINFQMANTIEAYVHRIGRTGRAGKLGTSITFLTND 699
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
D +V YDLKQ + +S S VP ELAKHEA++ K
Sbjct: 700 DEEVMYDLKQEISKSPVSKVPVELAKHEAAQHK 732
>gi|409082396|gb|EKM82754.1| hypothetical protein AGABI1DRAFT_104628 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 747
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 283/573 (49%), Positives = 378/573 (65%), Gaps = 38/573 (6%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN--ALYQNPHEAQLLF 152
+ +L I+ +YLG K K+++ K +++ +F FDW+ +DT + + A+ N AQ++F
Sbjct: 184 DNDLTAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDAQDDTFAEDSPVAVGSNRQGAQIMF 242
Query: 153 GRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR 212
GRG AGMD +R+ G + + K + D
Sbjct: 243 GRGHLAGMD------------DNGGPAVRRMPGGDNLADAMERRKATKVGID-------- 282
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYK 272
+RHW++K L EM ERDWRIFREDF+IS +G IP P+R+W E ++ +L ++R+GYK
Sbjct: 283 -ERHWTDKPLVEMKERDWRIFREDFSISARGGNIPHPLRSWRESQIPESILECIDRIGYK 341
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
PSPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML +I LP +++N GPY+++
Sbjct: 342 EPSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLAFIGNLPLFTDDNRHLGPYSLI 401
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KFA LG K VSIVGG+++EEQ F +R+G E+VIATPGRL D +
Sbjct: 402 LAPTRELAQQIESEARKFAGPLGYKCVSIVGGRAVEEQQFNLREGAEIVIATPGRLKDVI 461
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD-------E 445
ER VL+QC YVV+DEADRM+++GFE + +LDA+P+ ++ E+ E++D +
Sbjct: 462 ERHVLVLSQCRYVVMDEADRMVNLGFEADLTFILDALPAETMQGEDPGEQMDVDGETLVK 521
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
K R T +FSATMP AVERLARKYL+ P V+TIG AG+A + + Q V + EK +
Sbjct: 522 KGRTRVTTLFSATMPAAVERLARKYLKKPAVITIGEAGRAVDTVEQRVEFVGGDEK--KK 579
Query: 506 QRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
R+L+ L IVFVN KK ADMVAK+L + G+ TLH GK+QEQRE SL+ R
Sbjct: 580 MRILEILNSNQYSPPIIVFVNQKKTADMVAKDLSRGGWNAATLHSGKNQEQREASLQSLR 639
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+VLVATD+AGRGID+ DV+ VIN+ M IE Y HRIGRTGRAGK G + TFLT
Sbjct: 640 NGESDVLVATDLAGRGIDVQDVSLVINFQMANTIEAYVHRIGRTGRAGKLGTSITFLTND 699
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
D +V YDLKQ + +S S VP ELAKHEA++ K
Sbjct: 700 DEEVMYDLKQEISKSPVSKVPVELAKHEAAQHK 732
>gi|238491382|ref|XP_002376928.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
gi|220697341|gb|EED53682.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
Length = 665
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/671 (45%), Positives = 407/671 (60%), Gaps = 92/671 (13%)
Query: 9 GSNNKKPLFLTKAQREQLALERRQEQIAQQKR--------RQEQQQQLLSQPQTH--GRN 58
GS +P FL++A+RE++ALE+R +++ ++R R Q +S H GR
Sbjct: 6 GSVCIQPKFLSRAERERIALEKRAKEVEAERRLKASNGVDRSATQSPSVSSEVNHSDGRT 65
Query: 59 ---------SSDSRD-----RERERHRREREEEAKARERARLEKLAERERER-------- 96
SSD+ R H + R+ ++ LA + ++
Sbjct: 66 IPTGPRAMRSSDTPTAPAAMRNSHSHNKNRDLSPPPPPKSMSFGLASSKGDKRPVDDDEV 125
Query: 97 --ELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQL 150
++ L+K++Y+G+ + K+ K + +F+F+W EDTS D N LYQ+ HEA
Sbjct: 126 AAQVALVKQRYMGADQTSTFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANF 185
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
FGRG +LA EI L+ E ++
Sbjct: 186 -FGRG-----------RLA---------EI-----------------LEMERRRREESTR 207
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L L+ V +VG
Sbjct: 208 NQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESGLPKRLMELVNKVG 267
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGP 328
YK P+PIQ AAIP+ +Q RD+IG+A TGSGKTA+F+LP+L YI+ LP I E + +GP
Sbjct: 268 YKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGP 327
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA+V+APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL
Sbjct: 328 YAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRL 387
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE------ 442
+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++E+ E
Sbjct: 388 VDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAENSMAMS 447
Query: 443 --LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
+ K YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V + +
Sbjct: 448 QHIGTKDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIAGED 507
Query: 501 KFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
K R +RL D L IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +
Sbjct: 508 K--RKKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAA 565
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L R + +VLVATD+AGRGID+PDV+ VIN++M IE YTHRIGRTGRAGK+GVA T
Sbjct: 566 LASVRNGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAIT 625
Query: 617 FLTFHDTDVFY 627
FL DTDV Y
Sbjct: 626 FLGNEDTDVMY 636
>gi|156095474|ref|XP_001613772.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium vivax Sal-1]
gi|148802646|gb|EDL44045.1| pre-mRNA splicing factor RNA helicase PRP28, putative [Plasmodium
vivax]
Length = 1006
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/463 (55%), Positives = 337/463 (72%), Gaps = 9/463 (1%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
++HWSEKK EEMT+RDWRIFRED I KG +P P+R W E L+ +LL+A+++ Y+
Sbjct: 544 NKHWSEKKREEMTDRDWRIFREDNEIYIKGGIVPPPIRRWEESNLSSDLLKAIKKAKYEK 603
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQM AIP+ L+ RD+IGIAETGSGKTAAFVLPML Y+ +LPP++ E +GPYA+++
Sbjct: 604 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKQLPPLTYETSQDGPYALII 663
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
AP+RELA QI +ET KFA Y + V++VGG++ E Q F +R+G E++I TPGR+ DCLE
Sbjct: 664 APSRELAIQIFDETNKFASYCSCRTVAVVGGRNAEAQAFELRKGVEIIIGTPGRIHDCLE 723
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK------- 446
+ Y VLNQCNYV+LDEADRM+DMGFE V +LD +P++NLK E++ L E+
Sbjct: 724 KAYTVLNQCNYVILDEADRMMDMGFEDSVHFILDKIPTTNLKSEDDALALQEEMMAKAGH 783
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
R+YR T MFSATMPPAVERL+RKYLR P ++IG G I Q + E +K +LQ
Sbjct: 784 RLYRLTQMFSATMPPAVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFTTEGKKKQKLQ 843
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
+L+E + IVFVN KK AD++AK++ K+ +R LHGGK+QE RE +L F+ ++
Sbjct: 844 EILEEY-EAPIIVFVNQKKVADIIAKSISKMKFRAVALHGGKAQELREQTLNSFKNGDFD 902
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+LVATDVAGRGID+ V VIN+DMP +IE YTHRIGRTGRAG G+A +F+T D+ +F
Sbjct: 903 ILVATDVAGRGIDVQGVKLVINFDMPKDIESYTHRIGRTGRAGMKGMAISFVTEQDSHLF 962
Query: 627 YDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
YDLKQ LI SN+ VP ELA + ASK KPG++ P++ VF
Sbjct: 963 YDLKQFLISSNNIVPMELANNPASKVKPGSVL-HAPKKPHAVF 1004
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 3/80 (3%)
Query: 91 ERERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQNPHE 147
E +RE+ELE+IK+QYLG K KK++ KPSEKFR F+F+W+ +EDTS+ D N LYQN E
Sbjct: 352 ESQREKELEIIKQQYLGLNKKKKKMQKPSEKFRNIFNFEWDQSEDTSKNDTNPLYQNRLE 411
Query: 148 AQLLFGRGFRAGMDRREQKK 167
QLLFGRG+ AG+D REQ+K
Sbjct: 412 PQLLFGRGYIAGIDVREQRK 431
>gi|392595702|gb|EIW85025.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coniophora
puteana RWD-64-598 SS2]
Length = 773
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 295/600 (49%), Positives = 383/600 (63%), Gaps = 65/600 (10%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT-SRDMNALYQNPHE-AQLLFGR 154
E+ I+ +YLG+ + K+++ K +++ +F FDW+ T+DT + D A + + AQ++FGR
Sbjct: 181 EISAIRSRYLGADRKKRKIRKMNDR-KFVFDWDETDDTFAADSPAAAGSARQGAQVMFGR 239
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR-- 212
G AGMD A V P L A+L D + R
Sbjct: 240 GRIAGMDDGGATAPVA---------------VPGAPAAGTPLN-----ANLADPLERRRA 279
Query: 213 -----VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
+RHWS+K L+EM ERDWRIFREDF+I+ +G IP P+R+WAE ++ +L +E
Sbjct: 280 LKAGLDERHWSDKPLDEMKERDWRIFREDFSIAARGGSIPHPLRSWAESEIPEIILGVIE 339
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
+VGYK PSPIQ AIP+GLQ RDVIGIAETGSGKTAAFV+PMLT+IS +P +++N G
Sbjct: 340 QVGYKEPSPIQRQAIPIGLQNRDVIGIAETGSGKTAAFVIPMLTFISTMPAFTDDNRHLG 399
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
PYA+++APTRELAQQIE E KFA LG VSIVGG+++EEQ F +R+G E++IATPGR
Sbjct: 400 PYALILAPTRELAQQIEAEARKFATPLGFTCVSIVGGRAVEEQQFNLREGAEIIIATPGR 459
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN--------- 438
L D LER VL+QC Y+V+DEADRM+ +GFE ++ +LD +PS L+ E
Sbjct: 460 LKDVLERHVLVLSQCRYIVMDEADRMVHLGFEADLLFILDKLPSDVLQGEEPGAAAMMDV 519
Query: 439 ---EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
E K R T +FSATMPPAVERLARKYLR P V+TIG AG+A + + Q V
Sbjct: 520 DGAETAAAVRKGRTRVTTLFSATMPPAVERLARKYLRKPAVITIGEAGRAVDTVDQRVEF 579
Query: 496 MKESEKFSRLQRL-LDELGDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ EK RL+ L + E G + IVFVN KK ADMVAK+L + G+ +TLH GK+QEQ
Sbjct: 580 VNGDEK-KRLRMLEILETGGYASPIIVFVNQKKTADMVAKDLSRGGWSTSTLHSGKNQEQ 638
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L+ RT ++LVATD+AGRGID+ DV+ VINY M G IE Y HRIGRTGRAGK G
Sbjct: 639 REAALQALRTGEADILVATDLAGRGIDVQDVSLVINYQMAGTIEAYVHRIGRTGRAGKQG 698
Query: 613 VATTFLTFHDTDVFYDLKQMLIQ----------------SNSP---VPPELAKHEASKFK 653
A TFLT D +V YDLKQ + Q S SP V ELA+HE+++ K
Sbjct: 699 TAITFLTNDDDEVMYDLKQDVPQIADERGFILRVGAAEISKSPVSKVSAELARHESAQHK 758
>gi|346979571|gb|EGY23023.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
dahliae VdLs.17]
Length = 683
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 300/658 (45%), Positives = 418/658 (63%), Gaps = 32/658 (4%)
Query: 20 KAQREQLALERRQEQIAQQKRRQEQQQ-QLLSQPQTHGRNSSDSRDRERERHRREREEEA 78
KA+ E L R+ E+ A++K E++ + + P + R+ R ER++ R +
Sbjct: 24 KAKNEAEELRRKLEEDARKKAESEKKWLEKANAPAENHRDHDTDRPPERQQQDRRSGQNG 83
Query: 79 K-ARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFR----FSFDWENTED 133
K A ++ ++ E E E++ ++E+YLG + + ++K + F FDW+ ED
Sbjct: 84 KGASKKGGDARMTEEEFEKKQ--LRERYLGPEVNRNSSFSAAKKRKRATEFKFDWDEGED 141
Query: 134 TSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEA 193
T+ + L ++++ G G D E+ + AA+ EE ++G E
Sbjct: 142 TTLKDDQLAPRVTTSKVVSLSGIGGGDDFGEEAEQAARRRARRIEEQYGEDGPE------ 195
Query: 194 AALKLKEEAADLYDTFDMRVDR-----HWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
A + +E + D R +R W++K L EMT RDWRIF+EDF I+ KG IP
Sbjct: 196 LAQRFMDEWYNSRDLARKRAERFGFGKRWTDKALNEMTARDWRIFKEDFGIATKGGAIPN 255
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
PMRNW E L LL V RVGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP
Sbjct: 256 PMRNWDESGLPSRLLDIVHRVGYNEPTPIQRAAIPIALQARDLIGVAVTGSGKTASFLLP 315
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
+L YIS LPP+ E N+ +GPY +++APTREL QQIE E KFA LG +VVSIVGG S+E
Sbjct: 316 LLVYISDLPPLGEMNKNDGPYGLILAPTRELVQQIESEANKFATPLGFRVVSIVGGHSLE 375
Query: 369 EQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDA 428
EQ F +R G E+++ATPGRL+DC+ERR VL QC YV++DEADRMID+GFE V +LDA
Sbjct: 376 EQAFALRNGAEIIVATPGRLVDCIERRLLVLGQCCYVIMDEADRMIDLGFEEPVNKILDA 435
Query: 429 MPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
+P +N KP+ ++ E L K YR T M++ATMP VER+A+KYLR P +VTIG
Sbjct: 436 LPVTNEKPDTDEAENAQLMKRYLGGKDRYRQTMMYTATMPSIVERIAKKYLRRPAIVTIG 495
Query: 481 TAGKATELISQHVVMMK-ESEKFSRLQRLLDELGD--KTAIVFVNTKKNADMVAKNLDKL 537
G+A + + Q V + E ++ RLQ++L GD IVFVN K+N D VA+++ +
Sbjct: 496 NIGEAVDTVEQRVEFVSGEDKRKKRLQQILSS-GDFAPPIIVFVNIKRNCDAVARDVKHM 554
Query: 538 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 597
G+ TLHG K+QEQRE +L R + +VLVATD+AGRGID+ DV+ V+N++M NIE
Sbjct: 555 GFSAVTLHGSKTQEQREAALASVRNGQTDVLVATDLAGRGIDVADVSLVVNFNMATNIES 614
Query: 598 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YTHRIGRTGRAGK+GVA TFL D+D+ YD+KQ+L +S+ S VP EL +HEA++ +P
Sbjct: 615 YTHRIGRTGRAGKSGVAITFLGPEDSDLMYDMKQILTKSSISKVPEELRRHEAAQQRP 672
>gi|146181280|ref|XP_001022468.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|146144241|gb|EAS02223.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 749
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 266/584 (45%), Positives = 392/584 (67%), Gaps = 16/584 (2%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
E++ IK QYLG K KK+++KPSEKF+ F+F W++++DTS D N LY+N ++ LFGR
Sbjct: 172 EIQNIKIQYLGLNKEKKKILKPSEKFKNIFNFKWDSSDDTSVDFNPLYKNKIQSNFLFGR 231
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G +AG D +EQ KN K E++ K E + ++ ++ +D+
Sbjct: 232 GIQAGYDVKEQ---LEKNVK--YEDLIHKFDPEYQKKKQENKDKDKDKDTKRSIYDVTTK 286
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+KK +EMTERDWRIFRED +I KG ++P+PMR W EG+L P +L AV R Y+ P
Sbjct: 287 DHWSQKKFDEMTERDWRIFREDNDIIIKGGRVPKPMRTWEEGELPPYILDAVRRSKYEKP 346
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM IP+GLQ++D+IGI++TG+GKT AF++P++TY+ LPP+ EE +GPYA+++
Sbjct: 347 TPIQMQTIPIGLQRKDLIGISQTGTGKTCAFLIPLITYLRSLPPMDEEIAKDGPYALILI 406
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELA QIE+E + +K + +VGG+ Q F+++ GCE++I T GR+ D LE+
Sbjct: 407 PTRELAPQIEKEFQNLTSNMRMKSLVMVGGKDEGNQAFKLKLGCELLIGTVGRIKDALEK 466
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED----EELDEK---R 447
Y VL+Q ++VVLDEAD+MID+ FE V +LD + +N+K E+E+ +E + K +
Sbjct: 467 NYLVLDQVSWVVLDEADKMIDLNFEQDVNFILDKI-RTNMKSEDENMAVLQEQEAKVGEK 525
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
I+R T++FSATMPP +ERLA+KYLR+ ++IG AG A + I Q V M E +K SRLQ+
Sbjct: 526 IFRVTHLFSATMPPNLERLAKKYLRSFCYISIGEAGDAKKDIEQIVDFMSEGQKKSRLQK 585
Query: 508 LLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
+L E I+F N K + ++K LD+ G++ HGGK+Q+QRE +++GF+ +Y++
Sbjct: 586 IL-ETAKPPIIIFANEKTAVEKLSKILDRWGWQNVIYHGGKTQQQREAAVDGFKKGKYDI 644
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
LVATD+ RG+ + V VIN+D P NI+ + HR GRTGRAGK G+A TF+T H+ + Y
Sbjct: 645 LVATDLGARGLHVDGVKMVINFDAPKNIKDFIHRTGRTGRAGKRGIAYTFVTNHNEAIMY 704
Query: 628 DLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
DL++ L ++N +P EL H A++ KPGTI + PR + A
Sbjct: 705 DLREFLFKNNFDIPSELDTHPAAQTKPGTISENVPRSQQVILAQ 748
>gi|19075484|ref|NP_587984.1| U5 snRNP-associated protein Prp28 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654533|sp|Q9Y7T7.1|PRP28_SCHPO RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|4539604|emb|CAB40015.1| U5 snRNP-associated protein Prp28 (predicted) [Schizosaccharomyces
pombe]
Length = 662
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 294/652 (45%), Positives = 414/652 (63%), Gaps = 25/652 (3%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ--THGRNSSDSRDRERERHR 71
+P FL+KA+R +LALERRQ+++ + K +Q + L + H N+ + D ++ +
Sbjct: 26 RPKFLSKAERARLALERRQKEVEEAKAKQNDKLLDLRKRTFTNHLENNELADDEKKSQVS 85
Query: 72 REREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENT 131
+ A E + R+R Y+G K P + + + +F FDW+ T
Sbjct: 86 SVSSNNSGTESSATDEAFSMTIRQR--------YMGIKPPVVKKRRRNADKKFVFDWDAT 137
Query: 132 EDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
+DT +D +P +FGRG G D + +K AK+ + + R +G E+
Sbjct: 138 DDTMKDAET-SASPEATIAVFGRGKLGGFDDQSIRK--AKSNSGLIQ--RLLQGTEQDKA 192
Query: 192 EAAAL-KLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPM 250
A L +L+E+ A D D+ W EK LE M RDWRI +ED+NIS KG +P P+
Sbjct: 193 RAHELIQLQEKRAKKIDWDDV----PWREKPLEAMKPRDWRILKEDYNISIKGDDLPNPL 248
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
RNW E L E+L+ +++V YK PS IQ AAIP+ LQ++D+IGIAETGSGKTAAF++P++
Sbjct: 249 RNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLI 308
Query: 311 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
IS+LPP++E N GPYAVV+APTRELAQQI+ E KFA LG + VS+VGG + EEQ
Sbjct: 309 IAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQ 368
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
F++ QG +V+ATPGRL+DCLERR VL+QC YVV+DEADRM+DMGFE V +L ++P
Sbjct: 369 SFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLP 428
Query: 431 SSNLKPENED--EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL 488
SSN ++ + R T MFSAT+PP V LA+ YL PV++TIG G+A +
Sbjct: 429 SSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDR 488
Query: 489 ISQHVVMMK-ESEKFSRLQRLLDE-LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
+ Q V M+ +S+K+ R++ +L+ I+FVN K+N + +AK L+ +G+ TLHG
Sbjct: 489 VEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHG 548
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
KSQEQRE ++E R K ++LVATD+AGRGIDIP+V+ V+NY+M +IE YTHRIGRTG
Sbjct: 549 SKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTG 608
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPGTI 657
RAGK+G A TFL DTDV+YDL+ +L +S + +P EL HEA+ + I
Sbjct: 609 RAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPDELRNHEAAFVRHAAI 660
>gi|392566831|gb|EIW60006.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 779
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 282/582 (48%), Positives = 375/582 (64%), Gaps = 54/582 (9%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT--SRDMNALYQNPHEAQLLF 152
E +L I+ +YLG K K+R+ K +++ +F FDW+ +DT + A+ ++F
Sbjct: 214 EDDLTAIRSRYLGVDKKKRRIRKMNDR-KFVFDWDEQDDTYNAETPGAIGSQRQGGGVMF 272
Query: 153 GRGFRAGMD---------RREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAA 203
GRG AGMD R+ + + E R K G++E
Sbjct: 273 GRGHIAGMDDGGGTIVPGRKGGDGMVLADPLERRRA--AKTGIDE--------------- 315
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
RHWSEK L+EM ERDWRIFREDF+I+ +G +IP P+R+W E + E+L
Sbjct: 316 -----------RHWSEKSLDEMKERDWRIFREDFSIAARGGQIPHPLRSWRESAIPVEIL 364
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 323
V+++GYK PS IQ AIP+GLQ RD+IGIAETGSGKTAAFV+PML +IS+LP +++N
Sbjct: 365 DIVDQIGYKEPSAIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPMLAFISKLPVFNDDN 424
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
GPYA++MAPTRELAQQIE ET KFA LG VSIVGG+S+EEQ F +R G E++IA
Sbjct: 425 RHLGPYALIMAPTRELAQQIESETKKFAGPLGFTCVSIVGGRSVEEQQFNLRSGAEIIIA 484
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRL D +ER VL+QC Y+V+DEADRM+++GFE + +LD +PS ++ E++ ++
Sbjct: 485 TPGRLKDVIERHVIVLSQCRYIVMDEADRMVNLGFEVDLTFILDKLPSDTMEGEDQGSQM 544
Query: 444 D-------EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
D K R T +FSATMPP VERL +KYL+ P ++TIG AG+A + + Q V +
Sbjct: 545 DVDGETMVRKGRTRVTTLFSATMPPPVERLTKKYLKKPAIITIGEAGRAVDTVEQKVEFV 604
Query: 497 KESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
EK + QR+L+ L IVFVN KK ADMVAK+L + G+ TLH GK+QEQ
Sbjct: 605 HGDEK--KKQRMLEILNSNQYGAPIIVFVNQKKTADMVAKDLHRAGWSAATLHSGKNQEQ 662
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L+ RT ++LVATD+AGRGID+ DV+ VINY M IE Y HRIGRTGRAGK G
Sbjct: 663 REAALQSLRTGDSDILVATDLAGRGIDVQDVSLVINYQMANTIEAYVHRIGRTGRAGKQG 722
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
A TFL D +V YDLKQ + +S S VP ELA+HE+++ K
Sbjct: 723 TAITFLNNDDDEVMYDLKQEISKSPVSKVPAELARHESAQHK 764
>gi|171696192|ref|XP_001913020.1| hypothetical protein [Podospora anserina S mat+]
gi|170948338|emb|CAP60502.1| unnamed protein product [Podospora anserina S mat+]
Length = 715
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 309/695 (44%), Positives = 424/695 (61%), Gaps = 79/695 (11%)
Query: 14 KPLFLTKAQREQ-----------------LALERRQEQIAQQKRRQEQQQQLLSQPQTHG 56
KP F++K +RE+ LE + Q R + ++ + P+
Sbjct: 26 KPRFISKKERERLAAEKKAKEEEELKRKETTLENGHSNGSSQPSR--PRNEIPTGPKAMR 83
Query: 57 RNSSDSRDRERER---------------HRREREEEAKARERARLEKLAERERERELELI 101
+ +R +R HR + A + R K+ E E EL
Sbjct: 84 ADDRGNRQGDRREGDRREGDRRDDDRGPHRAGAKRGAPMDDEGRRTKM---EMNDEAEL- 139
Query: 102 KEQYLG---------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLF 152
+ +Y+G +KK ++R + KF +FDW+ +DTSR + +Y++ E +F
Sbjct: 140 RAKYMGPVVNQSTFSAKKKRRRTA--ANKF--NFDWDPDDDTSRPDDPIYKDRLEP--VF 193
Query: 153 GRGFRAGMDRREQKKLAA--KNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
RG D ++K A + + E EE R ++ +E+ A K K
Sbjct: 194 KRGGEESTDELVRRKAEAIRRGDPETGEE-RARQLLEQHERAKQAAKRKA---------- 242
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
+ HWSEK+LEEM ERDWRIF+E+F I+ KG IP PMR+W E L LL V VG
Sbjct: 243 --LGSHWSEKRLEEMKERDWRIFKENFGIATKGGAIPNPMRSWEESNLPRRLLDIVHDVG 300
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYA 330
Y PSPIQ A+IP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP+++ N+ +GPYA
Sbjct: 301 YDEPSPIQRASIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLNDVNKNDGPYA 360
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
+++APTREL QQIE E KFA LG VVSIVGG S+EEQ + +R G E+++ATPGRL+D
Sbjct: 361 LILAPTRELVQQIENEARKFATPLGFTVVSIVGGHSLEEQAYALRNGAEIIVATPGRLVD 420
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-------- 442
CLERR V QC Y+++DEADRMID GFE + +LDA+P +N KP+ E+ E
Sbjct: 421 CLERRLLVFTQCCYIIMDEADRMIDQGFEEPLTKILDALPVTNEKPDTEEAENPQLMKKY 480
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEK 501
L K YR T M++ATMPP VER+A+KYLR P +VTIG AG+A + + Q V + E ++
Sbjct: 481 LGGKDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFIAGEDKR 540
Query: 502 FSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL+ +L+ K IVFVN K+N +MVAK++ G+ TTLHG K+QEQRE SL
Sbjct: 541 KNRLREILNSGQFKPPIIVFVNIKRNCEMVAKDIKSWGFSTTTLHGSKTQEQREASLASV 600
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R + ++LVATD+AGRGID+PDV+ V+N++MP +IE YTHRIGRTGRAGK+GVA TFL
Sbjct: 601 RNGQSSILVATDLAGRGIDVPDVSLVVNFNMPSSIESYTHRIGRTGRAGKSGVAITFLGN 660
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
DT+V YDLKQ++ +S+ S VP EL +HEA++ KP
Sbjct: 661 EDTEVMYDLKQIISKSSISKVPDELRRHEAAQSKP 695
>gi|402086720|gb|EJT81618.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 703
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/665 (45%), Positives = 413/665 (62%), Gaps = 58/665 (8%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQ---KRRQEQQQQLLSQPQTHGRNSSDSRDRERERH 70
K L + +AQ+ Q +R++++ Q+ +RRQE QQ L + G +
Sbjct: 59 KRLEMEQAQKAQEEADRQRKEAEQREAARRRQEAQQSSLPGSRATGNS------------ 106
Query: 71 RREREEEAKARERARLEKLAERERERELELIKEQYLG-----SKKPKKRVIKPSEKFRFS 125
+RE+ K +A E E+ER I+ +Y+G S + K + +F
Sbjct: 107 --KREDTTKQHSKADKRSFEELEQER----IRLKYMGPEVNQSTFSASKKRKRATAKKFK 160
Query: 126 FDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKE- 184
FDW++ EDTSR + H + +G G+ G D +++ E + + KE
Sbjct: 161 FDWDSDEDTSRPDDGKGNQHH--NIRYG-GY--GTDEEDERVQRQAELTEKMDPVHGKER 215
Query: 185 --GVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYK 242
G+ E E A A + + A +HWSEK LEEM +RDWRIF+ED+ I+ K
Sbjct: 216 ARGMLESHERAKASRNQNALA-----------KHWSEKSLEEMRQRDWRIFKEDYGIATK 264
Query: 243 GSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKT 302
G +IP PMRNW E KL +LLR V+ VGY +P+PIQ AAIP+ L+ RD+IG+A TGSGKT
Sbjct: 265 GGRIPNPMRNWHESKLPKDLLRIVDLVGYTDPTPIQRAAIPIALENRDIIGVAATGSGKT 324
Query: 303 AAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIV 362
AAF+LP+L YI LPPI E N+ +GPY +++APTRELAQQIE E +KFA G VVS+V
Sbjct: 325 AAFLLPLLVYIQTLPPIDERNKNDGPYGLILAPTRELAQQIEAEAMKFATQRGYTVVSLV 384
Query: 363 GGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV 422
GG SI+ Q +R G E+++ATPGRL+D L R VL+QC Y+VLDEADRMI GFE +
Sbjct: 385 GGHSIDGQTIALRNGAEIIVATPGRLVDFLVSRKLVLSQCCYIVLDEADRMIQDGFEESL 444
Query: 423 VGVLDAMPSSNLKPENEDEE----------LDEKRIYRTTYMFSATMPPAVERLARKYLR 472
+LDA+P SN KP+ D E + + YR T M++ATMP +VE LA+KYLR
Sbjct: 445 TTILDALPVSNEKPDTGDAEDPNAMSMYPSWEHQLPYRQTMMYTATMPSSVELLAKKYLR 504
Query: 473 NPVVVTIGTAGKATELISQHVVMM-KESEKFSRLQRLLDELGDKTA-IVFVNTKKNADMV 530
P +VTIG AG+A + + Q V + E ++ RLQ +L+ + IVFVN ++N D V
Sbjct: 505 RPAMVTIGNAGEAVDTVEQRVEFIGGEDKRKKRLQYILNSGQFRPPIIVFVNIRRNCDTV 564
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
AK + +G TLHGGKSQEQRE++L+ R + VLVATD+AGRGID+ DV+ VIN++
Sbjct: 565 AKEIKAMGKSAVTLHGGKSQEQRELALKSVRDGKTEVLVATDLAGRGIDVADVSLVINFN 624
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEA 649
M NIE YTHRIGRTGRAGK+GVA TFL D DV YDLKQM+++S+ S +P EL +HEA
Sbjct: 625 MATNIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMILKSSISKLPDELRRHEA 684
Query: 650 SKFKP 654
++ KP
Sbjct: 685 AQSKP 689
>gi|358055430|dbj|GAA98550.1| hypothetical protein E5Q_05237 [Mixia osmundae IAM 14324]
Length = 749
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/705 (44%), Positives = 416/705 (59%), Gaps = 98/705 (13%)
Query: 15 PLFLTKAQ---------REQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDR 65
P F++K Q AL ++E+ AQ K Q L + +T SR
Sbjct: 56 PKFMSKRQREELAAREAAAAAALASQKEREAQVKHEQRLAAALAASQET-------SRQA 108
Query: 66 ERERHRREREEEAKARERARLEKLAERERER-------------------------ELEL 100
+ER + R +A R R R A+ RE + L
Sbjct: 109 AQERQQDSRRGKAGYRGRGRGAFAAQSSRETPNLPYDGPPATDGSTTKGDDSLPVVDKSL 168
Query: 101 IKEQYL------------GSKKPKKRVIKPSEKFRFSFDWENTEDT-SRDMNALYQNPHE 147
+ +YL GS +++ +K + +F FDW +DT + + + LY+
Sbjct: 169 LATRYLGANVASARSGSNGSGAQQRKRLKGGQDKKFLFDWNGDDDTGANEYDPLYKQ--- 225
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYD 207
R E AA + + +++P ++K E + D
Sbjct: 226 --------------RIEGAIAAAAAAATVTRHGTRAIDQDDQPLAGPSIKKITEGKGIMD 271
Query: 208 TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
+RHWS+K L+EM ERDWRIFREDF+I+ +G IP P+R+W E + ++L V+
Sbjct: 272 ------ERHWSQKSLKEMRERDWRIFREDFSIASRGGHIPLPIRSWRESAIPEDILAIVD 325
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
+GYK+PS IQ AIP+GLQ RD+IGIAETGSGKTAAFV+P L YI RLPPI+E+ G
Sbjct: 326 DMGYKDPSAIQRQAIPIGLQNRDLIGIAETGSGKTAAFVIPALAYIGRLPPITEQTAHLG 385
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
PYA+++APTRELAQQIE E +F LG KVVSIVGG+++EEQ F ++ GCE+VIATPGR
Sbjct: 386 PYALILAPTRELAQQIESEARRFTSKLGYKVVSIVGGRAVEEQAFNMKDGCEIVIATPGR 445
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED-EELDE- 445
L DC+ER VL+QC YVV+DEADRMI +GFE + +LD++P SN+KP+ E+ EE D
Sbjct: 446 LKDCIERHILVLSQCTYVVMDEADRMISLGFEDVLNFILDSLPVSNIKPDTEEAEEADAM 505
Query: 446 ------------KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV 493
+++YR T MFSATMPPA ERLAR YLR P +VTIG AG+A + + Q V
Sbjct: 506 LKRLNDTGSGMPQQLYRQTVMFSATMPPACERLARAYLRRPAIVTIGVAGQAVDTVEQRV 565
Query: 494 VMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKS 549
+ EK + RLL+ L IVFVN KK+AD +AK++++ G+R TTLH GK+
Sbjct: 566 EFIHGEEK--KKHRLLELLNSGEFQPPVIVFVNQKKSADGLAKDINRGGWRATTLHSGKN 623
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
Q QRE +L R+ +VLVATD+AGRGID+PDV+ VIN+ M NIE Y HRIGRTGRAG
Sbjct: 624 QIQREEALASLRSGEMSVLVATDLAGRGIDVPDVSLVINFQMANNIESYVHRIGRTGRAG 683
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
+TGVA TFLT D +V YDLKQ + +S S VPPELA+HEA++ K
Sbjct: 684 RTGVAVTFLTNDDDEVMYDLKQEISKSPISKVPPELARHEAAQTK 728
>gi|393245555|gb|EJD53065.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 756
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 288/589 (48%), Positives = 379/589 (64%), Gaps = 57/589 (9%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ-LLFGRG 155
+L I+ +YLG K K+++ K +++ +F FDW+ EDT P ++ L+FGRG
Sbjct: 178 DLSAIRSRYLGVDKKKRKIRKMNDR-KFVFDWDAQEDTMEAAAKAVAAPGQSPGLMFGRG 236
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AGMD K E+ + + ++ +A+ + + E R
Sbjct: 237 HIAGMDDGGGGGGPGKREERHADFMERR--------QASRVGIDE--------------R 274
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEK L++M +RDWRIFREDF+IS +G +IP P+R+W E ++ ++L +E +GYK PS
Sbjct: 275 HWSEKPLKDMKDRDWRIFREDFSISARGGQIPHPLRSWEESEIPQQILDVIEGIGYKEPS 334
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAP 335
PIQ AIP+GLQ RD+IGIAETGSGKTA+FV+PML YIS LP +E+N GPYA+++AP
Sbjct: 335 PIQRQAIPIGLQGRDLIGIAETGSGKTASFVIPMLVYISNLPLFNEDNRHLGPYALILAP 394
Query: 336 TRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
TRELAQQIE E KFA LG K VSIVGG+S+EEQ F +R+G E+VIATPGRL D LER
Sbjct: 395 TRELAQQIESEARKFASPLGYKCVSIVGGRSVEEQSFNMREGAEIVIATPGRLKDVLERH 454
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE------DEELD----- 444
VL+QC Y+V+DEADRM+++GFE ++ +LD +P LK E + D E++
Sbjct: 455 VLVLSQCTYIVMDEADRMVNLGFEADLMFILDKLPGDLLKGEEDTSSGRNDTEMEVDVDW 514
Query: 445 ---------------EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
+K R T +FSATMPPAVERLARKYL+ P V+TIG AG+A + +
Sbjct: 515 ETQGAVLVPKAADTSKKGRTRVTTLFSATMPPAVERLARKYLKRPAVITIGEAGRAVDTV 574
Query: 490 SQHVVMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
Q V + EK + RLLD L + IVFVN KK ADMVA++L K G+ TLH
Sbjct: 575 EQKVEFVGGDEK--KKLRLLDILNNDGYPTPIIVFVNQKKTADMVARDLQKAGWSAATLH 632
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
GKSQE RE +L R+ ++LVATD+AGRGID+PDV V+N+ M IE Y HRIGRT
Sbjct: 633 SGKSQEGREAALASLRSGEADILVATDLAGRGIDVPDVGLVVNFQMANTIEAYVHRIGRT 692
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
GRAGK G A TFLT D +V YDLK + +S S VPPELA+HEA++ K
Sbjct: 693 GRAGKKGTAITFLTNEDDEVMYDLKNEISKSPVSKVPPELARHEAAQTK 741
>gi|302692692|ref|XP_003036025.1| hypothetical protein SCHCODRAFT_256129 [Schizophyllum commune H4-8]
gi|300109721|gb|EFJ01123.1| hypothetical protein SCHCODRAFT_256129 [Schizophyllum commune H4-8]
Length = 760
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 288/590 (48%), Positives = 378/590 (64%), Gaps = 67/590 (11%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA--QLLFGR 154
+L I+ +YLG + K+++ K +++ +F FDW+ +DT+ D + +A L+FGR
Sbjct: 190 DLSAIRSRYLGVDRKKRKIRKMNDR-KFVFDWDAQDDTAADATPVAAADGQAGGSLMFGR 248
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIR-KKEGVEEKPEEAAALKLKEEAADLYDTFDMRV 213
G AGMD N + E R K G++E
Sbjct: 249 GHVAGMDMS-----GGDNHADAMERRRAAKSGMDE------------------------- 278
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
RHWSEK L EM ERDWRIFREDF+I+ +G +IP P+R+W E + +L +E +GYK
Sbjct: 279 -RHWSEKALHEMKERDWRIFREDFSIAARGGQIPHPLRSWQESDIPSSILDVIETIGYKE 337
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
PSPIQ AIP+GLQ RD+IGIAETGSGKTAAFV+P+L +IS + P+++EN GP+A+++
Sbjct: 338 PSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPLLAFISAVAPLTDENRHLGPFALIL 397
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE ET KFA LG VSIVGG+S+EEQ F +R+G E++IATPGRL D LE
Sbjct: 398 APTRELAQQIEVETRKFASGLGYTCVSIVGGRSVEEQQFNLREGAEIIIATPGRLKDVLE 457
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS---------------SNLKPEN 438
R VL+QC YVV+DEADRM+ +GFEP + +LD +P+ N K +
Sbjct: 458 RHVLVLSQCRYVVMDEADRMVHLGFEPDLNFILDQLPAETMEGEESGDMMVVDDNRKHRH 517
Query: 439 EDEELD---EKRI-------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL 488
+D +D E+R+ R T +FSATMPPAVERLARKYLR P ++TIG AG+A +
Sbjct: 518 DDHAMDIDGEQRMKLVKKGRTRVTTLFSATMPPAVERLARKYLRRPAIITIGEAGRAVDT 577
Query: 489 ISQHVVMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTL 544
+ Q V + EK + RLL+ L IVFVN KK ADMVAK+L + G+ +TL
Sbjct: 578 VEQRVEFVNGDEK--KKHRLLEILNSGQYPSPIIVFVNQKKMADMVAKDLGRAGWSASTL 635
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
H GK+QEQRE +L R+ ++LVATD+AGRGID+ DV+ V+N+ M G IE Y HRIGR
Sbjct: 636 HSGKNQEQREAALASLRSGEADILVATDLAGRGIDVQDVSLVVNFQMAGTIEAYVHRIGR 695
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
TGRAGK G A TFLT D +V YDLKQ + +S S VP ELAKHEA++ K
Sbjct: 696 TGRAGKLGTAITFLTNEDDEVMYDLKQEISKSPVSKVPVELAKHEAAQHK 745
>gi|326431316|gb|EGD76886.1| hypothetical protein PTSG_08233 [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/592 (47%), Positives = 389/592 (65%), Gaps = 51/592 (8%)
Query: 12 NKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHR 71
N KP FL+K +R++ AL RRQEQ+A Q+ + E+Q+ +ERER
Sbjct: 215 NAKPKFLSKKERQEAALRRRQEQVAAQRAKMEEQR------------------KERERLD 256
Query: 72 REREEEAKARERA-----------RLEKLAERERERELELIKEQYLGSKKPKKRVIKPSE 120
RE A+A + + ++ERE+EL+ IK++Y G K+++ + +E
Sbjct: 257 REARMIARAARHSDGNATAADASAGADDSVDKEREQELQAIKDRYFGKHTEKRKIRRMNE 316
Query: 121 KFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI 180
K +F FDWE T+DTS D N LY+ HEAQL FGRG AG+D QKK K ++M E
Sbjct: 317 K-KFVFDWEGTDDTSVDHNPLYKEVHEAQL-FGRGHLAGIDVSSQKKEKGKFYEDMLE-- 372
Query: 181 RKKEGVEEKPEEAAALKLKEEA-ADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 239
R++ V+++ E+ KL+++ L+D +RHWSEK L +MT+RDWRIFRED+NI
Sbjct: 373 RRRTEVQKEQEDRRLRKLRQKKQKQLFD------ERHWSEKPLADMTKRDWRIFREDYNI 426
Query: 240 SYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGS 299
+ G +IP P+R W+E L P +L ++ +G+K P+PIQ AA+P+GL RD+ G+AETGS
Sbjct: 427 TTTGGRIPSPLRFWSESGLDPRILEIIDDLGFKEPTPIQRAALPIGLTNRDICGVAETGS 486
Query: 300 GKTAAFVLPMLTYISRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
GKT AFVLP+L +I LP + E + + GPYA+++AP+REL QQIEE+T KF+ LG++
Sbjct: 487 GKTLAFVLPLLQWILSLPKLEREQDIDNGPYAIILAPSRELVQQIEEQTRKFSDPLGVRT 546
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
V+++GG S EEQGF++RQGCEVVIATPGRLID LE RY VLNQC YVV+DEADRM+DMGF
Sbjct: 547 VAVIGGASREEQGFQLRQGCEVVIATPGRLIDVLENRYLVLNQCTYVVMDEADRMLDMGF 606
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDE---------KRIYRTTYMFSATMPPAVERLARK 469
EP V +L+ +P +N KP N DE DE K YR T +F+ATMPPAV +LA
Sbjct: 607 EPAVQQILEHVPVTNQKP-NTDEAEDEAFLLQDIKNKNKYRQTVLFTATMPPAVMKLANT 665
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADM 529
YLR P + IGT GK + + Q +++ E K + L ++L + I+FVN KK D+
Sbjct: 666 YLRRPATIRIGTVGKPVDRVEQRMILTTEQNKRNELVKILRSEPEPPIIIFVNQKKGCDV 725
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
+A++L+K+GYR TLHGGK Q+ RE +L + ++LVATDVAGRGIDIP
Sbjct: 726 LARSLEKMGYRAATLHGGKGQDVREHALASLKEGYKDILVATDVAGRGIDIP 777
>gi|443896844|dbj|GAC74187.1| U5 snRNP-like RNA helicase subunit [Pseudozyma antarctica T-34]
Length = 698
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 283/576 (49%), Positives = 372/576 (64%), Gaps = 55/576 (9%)
Query: 95 ERELELIKEQYLG----SKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQL 150
E E E I+ +YLG KKP++ KP++K +F FDW +DT+ D A+
Sbjct: 148 EAEQEAIRRRYLGLKDDRKKPRR---KPTDK-KFVFDWGEDDDTAADSLAV--------- 194
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGV----EEKPEEAAALKLKEEAADLY 206
Q + AA++ + G P EA+ + AA +
Sbjct: 195 --------------QIRSAAQHAAPSHLVAPRANGTGAPSHVDPLEASLGR----AARRF 236
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
D D+HWSEK LE+M ERDWRIFREDF IS +G IPRP+R+W E + P +L +
Sbjct: 237 D------DKHWSEKTLEQMKERDWRIFREDFGISARGGNIPRPLRSWRESSIPPSILATI 290
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
E +GY PSPIQ AIP+GLQ RD+IGIAETGSGKTA+F++PML YIS LP + E +A
Sbjct: 291 EEIGYTEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPMLAYISHLPKLDENTKAL 350
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPG 386
GP A+++ PTRELAQQIE ET KFA LG++ VSIVGG+ + +Q + +R G E++IATPG
Sbjct: 351 GPQALILVPTRELAQQIEGETNKFAPRLGLRCVSIVGGRDMNDQAYALRDGAEIIIATPG 410
Query: 387 RLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEEL 443
RL DC+ER VL+QC YVV+DEAD+M+DMGFEPQV +LD++P SNLKP++ ED
Sbjct: 411 RLKDCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLPVSNLKPDSSVAEDPLQ 470
Query: 444 DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFS 503
D YR T ++SATMP +VER+AR YLR P +TIG AG+A + Q V + ++
Sbjct: 471 DGVGKYRVTMLYSATMPASVERMARVYLRRPATITIGNAGQAVASVEQIVEFVANEDQ-- 528
Query: 504 RLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEG 559
R QRL+ L + IVFVN KK ADM++ +L + G+ V+TLH GK+QE RE +L
Sbjct: 529 RRQRLISILQRSSHLVPIIVFVNQKKAADMLSGSLVRAGFYVSTLHSGKTQELREEALAH 588
Query: 560 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
R +LVATD+AGRGID+P+V VIN+ MP NIE Y HRIGRTGRAGKTG A TF+
Sbjct: 589 LRDGTTQILVATDLAGRGIDVPNVGLVINFAMPNNIEAYVHRIGRTGRAGKTGTAITFVD 648
Query: 620 FHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D+D+FYDLK L +S S VP +LA+H A++ +P
Sbjct: 649 QADSDLFYDLKLELTKSKLSTVPQQLARHPAAQHRP 684
>gi|405118039|gb|AFR92814.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Cryptococcus
neoformans var. grubii H99]
Length = 738
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 282/570 (49%), Positives = 373/570 (65%), Gaps = 44/570 (7%)
Query: 97 ELELIKEQYLG----SKKPKKRVIKPSEKFRFSFDWENTEDTSR-DMNALYQNPHE---A 148
ELE ++ +YLG KKP+ ++ ++ + FDW +DTS D N+ + E
Sbjct: 182 ELEALRARYLGKRTDGKKPR---LRKAQDKKIIFDWNEQDDTSAADQNSWTREVRELVPG 238
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
+FG G AGMD ++ N + E R +G ++
Sbjct: 239 GTMFG-GRLAGMDGAKKNDARTDNHADPLERRRAVKGKDD-------------------- 277
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
DRHWS+K L+EM ERDWRIFREDF+I+ +G IP P+RNW E + ++L +E
Sbjct: 278 -----DRHWSDKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEE 332
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+GYK PSPIQ AIP+G+Q RD+IGIA+TGSGKTAAFV+PML YI LPP++++N GP
Sbjct: 333 IGYKEPSPIQRQAIPIGMQNRDLIGIAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGP 392
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA++MAPTRELAQQIE ET KFA LG K VSIVGG+S+EEQ F +R G E++IATPGRL
Sbjct: 393 YALIMAPTRELAQQIEAETRKFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRL 452
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDEELD 444
D +++ V++QC YVV+DEADRM+D+GFE + +LD+MP++ +KP++ + +
Sbjct: 453 KDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEG 512
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-KFS 503
E + +R T +FSATMPPAVERLARKYL P V IG AG+A + + Q V + E K +
Sbjct: 513 EWQGWRVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKA 572
Query: 504 RLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RL +L +G IVFVN KK ADMV K + + G TLH GKSQEQRE +L+ R
Sbjct: 573 RLIEILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQSLRD 632
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+VLVATD+AGRGID+PDV+ VIN+ M IE Y HRIGRTGRAGKTGVA TFLT D
Sbjct: 633 GEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDD 692
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+V YDL+ + +S S + PELA+HEA++
Sbjct: 693 DEVMYDLRVEVEKSKMSKMNPELARHEAAR 722
>gi|340501985|gb|EGR28708.1| snrnp protein, putative [Ichthyophthirius multifiliis]
Length = 756
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/584 (44%), Positives = 384/584 (65%), Gaps = 21/584 (3%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
E + IK QYLG K KK+++KPSEKF+ F+F W++ +DTS D N LY+N E LLFGR
Sbjct: 185 ETQNIKIQYLGLNKQKKKILKPSEKFKNIFNFKWDSRDDTSVDYNPLYKNRMETNLLFGR 244
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG D +EQ + +++ ++ + + E K K+E +D+ +
Sbjct: 245 GILAGYDVKEQ----------LENKVKYEDLIHKYDPEYQKKKSKDEKIIKKSIYDISLK 294
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS K+ EMTERDWRIFRED +I KG K+PRP+R W EG L P +L ++ R+ Y+ P
Sbjct: 295 DHWSLKQTMEMTERDWRIFREDNDIIIKGGKVPRPIRRWEEGDLPPYILDSIRRLKYEKP 354
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM IP+G+ ++D+IGI+ TGSGK+ AF++P++ Y+ LPP+ EE +GPYA+++
Sbjct: 355 TPIQMQTIPIGMLRKDLIGISPTGSGKSCAFLIPLIVYLRSLPPMDEEVAKDGPYALILI 414
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER 394
PTRELA QIE+E + +K + +VGG+ Q ++++ GCE++I T GR+ D L++
Sbjct: 415 PTRELAPQIEKEFQNLTTNMRLKSLVMVGGRDEGNQAYKLKVGCELLIGTTGRIKDALQK 474
Query: 395 RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE-DEELDEK------R 447
Y VL+Q ++VVLDEAD+MIDMGFE V +LD + S++K E+E +L EK +
Sbjct: 475 NYLVLDQVSWVVLDEADKMIDMGFEADVNFILDRI-KSHMKSEDELMADLQEKEAKAGEK 533
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
IYR T++FSATMPP +E+LA+KYLR+ ++IG G + I Q V + E +K SRLQ
Sbjct: 534 IYRVTHLFSATMPPEIEKLAKKYLRSFCYISIGEPGGGKKDIEQIVEFIAEGQKKSRLQN 593
Query: 508 LLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
+L + I+F N K + + K L+K G+ HGG++Q+QRE +++GF+ +Y++
Sbjct: 594 ILKD-QKPPIIIFANEKNAVEKLQKILEKWGWNSVIYHGGRTQQQREAAVDGFKKGKYDI 652
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
LVATD+ RG+ + V VIN+D P NI+ + HR GRTGRAGK G+A TFLT ++ +FY
Sbjct: 653 LVATDLGSRGLHVDGVKMVINFDAPKNIKDFVHRTGRTGRAGKRGIAYTFLTNNNEIIFY 712
Query: 628 DLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
DLK+ LI++N VP EL +H AS+ KPGT+ + PR ++A
Sbjct: 713 DLKEFLIKNNYDVPQELDQHPASQTKPGTVLEMVPRSKQVLYAQ 756
>gi|58259181|ref|XP_567003.1| Pre-mRNA splicing factor RNA helicase PRP28 [Cryptococcus
neoformans var. neoformans JEC21]
gi|134107275|ref|XP_777522.1| hypothetical protein CNBA6450 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819230|sp|P0CQ89.1|PRP28_CRYNB RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|338819231|sp|P0CQ88.1|PRP28_CRYNJ RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|50260216|gb|EAL22875.1| hypothetical protein CNBA6450 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223140|gb|AAW41184.1| Pre-mRNA splicing factor RNA helicase PRP28, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 738
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 281/570 (49%), Positives = 377/570 (66%), Gaps = 44/570 (7%)
Query: 97 ELELIKEQYLG----SKKPKKRVIKPSEKFRFSFDWENTEDTSR-DMNALYQNPHE---A 148
ELE ++ +YLG KKP+ ++ ++ + FDW +DTS D ++ + E
Sbjct: 182 ELEALRARYLGKRTDGKKPR---LRKAQDKKIIFDWNEQDDTSAADQSSWTREVRELVPG 238
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
+FG G AGMD ++ + + N + E R A+K K++
Sbjct: 239 GTMFG-GRLAGMDGAKKNETRSDNHADPLERRR-------------AVKGKDD------- 277
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
DRHWS+K L+EM ERDWRIFREDF+I+ +G IP P+RNW E + ++L +E
Sbjct: 278 -----DRHWSDKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEE 332
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+GYK PSPIQ AIP+G+Q RD+IG+A+TGSGKTAAFV+PML YI LPP++++N GP
Sbjct: 333 IGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGP 392
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA++MAPTRELAQQIE ET +FA LG K VSIVGG+S+EEQ F +R G E++IATPGRL
Sbjct: 393 YALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRL 452
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDEELD 444
D +++ V++QC YVV+DEADRM+D+GFE + +LD+MP++ +KP++ + +
Sbjct: 453 KDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEG 512
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-KFS 503
E + +R T +FSATMPPAVERLARKYL P V IG AG+A + + Q V + E K +
Sbjct: 513 EWQGWRVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKA 572
Query: 504 RLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RL +L +G IVFVN KK ADMV K + + G TLH GKSQEQRE +L+ R
Sbjct: 573 RLIEILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRD 632
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+VLVATD+AGRGID+PDV+ VIN+ M IE Y HRIGRTGRAGKTGVA TFLT D
Sbjct: 633 GEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDD 692
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+V YDL+ + +S S + PELA+HEA++
Sbjct: 693 DEVMYDLRIEVEKSKMSKMNPELARHEAAR 722
>gi|388579900|gb|EIM20219.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 626
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 293/651 (45%), Positives = 404/651 (62%), Gaps = 73/651 (11%)
Query: 6 DEGGSNNKKPLFLTKAQREQLALERRQ-EQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRD 64
+E N KP FL+K+QRE LALE+RQ E + +QK+ ++Q++Q + SS+
Sbjct: 11 EESKQNQLKPKFLSKSQREALALEKRQNEHLEKQKQLEKQRKQKEDLDRRLNGVSSEVST 70
Query: 65 RERERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKR-VIKPSEKFR 123
+ E+++ +K R+R+R + + + +++ IK +YLG K+ +KR IK ++ R
Sbjct: 71 SD------EQKDVSKKRDRSR----SPQPEDPDMKAIKSRYLGEKEKRKRKTIKITDAKR 120
Query: 124 FSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKK 183
+FDW+ EDT + Y K L E+ ++
Sbjct: 121 MNFDWDEEEDTEASIPTDY-----------------------KPLTRPKEQSNEQQF--- 154
Query: 184 EGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKG 243
L++++ YD+ R+W EK+L +MTERDWRI EDFNIS +G
Sbjct: 155 ---------VDHLEIRQAKRHGYDS------RNWREKELSQMTERDWRIVNEDFNISARG 199
Query: 244 SKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 303
+IPRP+R+W E + E+L ++ +GYK PS IQ AIP+GL RD+IGIAETGSGKTA
Sbjct: 200 GQIPRPLRSWEESAIPAEILDIIKEIGYKEPSAIQRQAIPIGLNNRDLIGIAETGSGKTA 259
Query: 304 AFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVG 363
+FV+PM+ YIS+L PI E N GPYA+++APTRELAQQIE ET KFAH + +S+VG
Sbjct: 260 SFVIPMMNYISKLQPIGEHNYHLGPYALILAPTRELAQQIESETKKFAHPMSFNCLSLVG 319
Query: 364 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 423
G+S++EQ F +R G E++IATPGRL D LER VL+QCNY+VLDEADRM+ MGFE ++
Sbjct: 320 GKSLDEQSFNLRTGVEIIIATPGRLKDLLERSIIVLSQCNYLVLDEADRMVAMGFEQELT 379
Query: 424 GVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 483
+LD M + E+ I R T+++SATMP AVE++ARKYLR P + IG AG
Sbjct: 380 FILDQMGTP------------EENIQRQTFLYSATMPSAVEKIARKYLRKPATINIGGAG 427
Query: 484 KATELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGY 539
+A + + Q V ++ K + +RL+D L + IVFVN K++AD++AK L + +
Sbjct: 428 QAVDTVEQVVELIDNETK--KTKRLIDILNSEKYAPPIIVFVNQKRSADVLAKELTRARW 485
Query: 540 RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 599
TTLH GK+Q+QRE +L+ R +VLVATD+AGRGID+ DV+ V NY M NIE Y
Sbjct: 486 ECTTLHSGKTQDQREEALQSLRDGVVSVLVATDLAGRGIDVADVSLVCNYHMANNIESYI 545
Query: 600 HRIGRTGRAGKTGVATTFLTFH-DTDVFYDLKQMLIQSN-SPVPPELAKHE 648
HRIGRTGRAGK G A TFLT H D +V YDLKQ L +S S P ELA HE
Sbjct: 546 HRIGRTGRAGKKGKAITFLTPHADDEVMYDLKQELDKSPISQTPRELATHE 596
>gi|213409157|ref|XP_002175349.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Schizosaccharomyces japonicus yFS275]
gi|212003396|gb|EEB09056.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Schizosaccharomyces japonicus yFS275]
Length = 672
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 297/662 (44%), Positives = 428/662 (64%), Gaps = 33/662 (4%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLL--SQPQTH-GRNSSDSRDRERERH 70
+P FL+KA+R +LA++RR++Q+ +Q+ R + Q+Q L + QT+ GR + S R R
Sbjct: 25 RPKFLSKAERAKLAIQRREQQVQEQRARLDTQRQALHLANGQTNNGRENDSSSTRSRSPA 84
Query: 71 RREREEEAKARERARLEKLAERERERELEL-IKEQYLGSKKPKKRVIKPSEKFRFSFDWE 129
E+ + + + A E + + IK++Y+G K P K+ + ++K +F FDW+
Sbjct: 85 ISEKTQSSHNITESETTTAASTESADDPDWTIKQRYMGIKPPVKKKRRNADK-KFVFDWD 143
Query: 130 NTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEK 189
++DTS +AL + H+ +FGRG G D E +K + + + + + K G E
Sbjct: 144 TSDDTS--ASALPNDSHDQLGVFGRGKLGGFDETEIRK--TQQHEALIQRLLK--GSPED 197
Query: 190 PEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRP 249
A L +++ +D D W +K LE M RDWRI +EDF IS KG +P P
Sbjct: 198 QRRAHMLIEQQKRKTKKVDWD---DVPWYQKPLEAMKPRDWRILKEDFGISVKGDNLPNP 254
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
+RNW E L ++ +++V YK PS IQ AAIPL LQ+ D+IGIAETGSGKTAAFV+P+
Sbjct: 255 LRNWEESSLPEKVQATLKKVKYKEPSAIQRAAIPLLLQRNDIIGIAETGSGKTAAFVIPL 314
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+T+ISRLP + + N GPYA+++APTRELAQQI+ E KF+ LG++ V++VGG + EE
Sbjct: 315 VTHISRLPALDDTNMHLGPYAIILAPTRELAQQIQVEASKFSEPLGLRCVAVVGGHAFEE 374
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q F++ QG +V+ATPGRL+DCLERR VL+QC +VV+DEADRM+DMGFE V L ++
Sbjct: 375 QSFQMSQGAHIVVATPGRLVDCLERRVFVLSQCYFVVMDEADRMVDMGFEEDVNKALTSL 434
Query: 430 PSSNLKPENEDEEL----DEKRIY-----RTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
P S ++DE + D R R T MFSAT+P VE LA++YL P+++TIG
Sbjct: 435 PPSG---HDDDEAMVAGEDLLRSTRPTRARQTVMFSATLPTRVENLAKRYLNKPIMLTIG 491
Query: 481 TAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDKTA---IVFVNTKKNADMVAKNLDK 536
T G+A + + Q V M+ ++++ RL+ +L+ ++ A +VFVN K+N + +AK L
Sbjct: 492 TIGQAVDRVEQRVEMIADDAKRRKRLEEILNT--NRYAPPIVVFVNLKRNCESLAKALYN 549
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
+G+RV TLHG KSQEQRE ++E R ++LVATD+AGRGIDIP+V+ V+NY+M +IE
Sbjct: 550 MGWRVVTLHGSKSQEQRERAIEQLRNHSADILVATDLAGRGIDIPNVSLVVNYNMAKSIE 609
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPG 655
YTHRIGRTGRAGK G A TFL DT V+YDL+ ML +S NS +P EL +HEA+ +P
Sbjct: 610 DYTHRIGRTGRAGKHGTAITFLGPEDTGVYYDLRLMLSKSANSHIPEELRRHEAALARPN 669
Query: 656 TI 657
+
Sbjct: 670 IV 671
>gi|321249945|ref|XP_003191631.1| pre-mRNA splicing factor RNA helicase PRP28 [Cryptococcus gattii
WM276]
gi|317458098|gb|ADV19844.1| Pre-mRNA splicing factor RNA helicase PRP28, putative [Cryptococcus
gattii WM276]
Length = 737
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 278/570 (48%), Positives = 371/570 (65%), Gaps = 44/570 (7%)
Query: 97 ELELIKEQYLG----SKKPKKRVIKPSEKFRFSFDWENTEDTSR-DMNALYQNPHE---A 148
ELE ++ +YLG KKP+ ++ ++ + FDW +DTS D ++ + E
Sbjct: 182 ELEALRARYLGKRTDGKKPR---LRKAQDKKIIFDWNEQDDTSAADQSSWTREVRELLPG 238
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
+FG G AGMD + + N + E R +G ++
Sbjct: 239 GTMFG-GHLAGMDGARKNDVRTDNHADPLERRRAVKGKDD-------------------- 277
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
DRHWS+K L+EM ERDWRIFREDF+I +G IP P+RNW E + ++L +E
Sbjct: 278 -----DRHWSDKPLDEMKERDWRIFREDFSIVARGGGIPYPLRNWRESAIPSQILDIIEE 332
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+GYK PSPIQ AIP+G+Q RD+IG+A+TGSGKTAAFV+PML YI LPP++++N GP
Sbjct: 333 IGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGP 392
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA+++APTRELAQQIE ET KFA LG K VSIVGG+S+EEQ F +R G E++IATPGRL
Sbjct: 393 YALILAPTRELAQQIEAETRKFAIPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRL 452
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDEELD 444
D +++ V++QC YVV+DEADRM+D+GFE + +LD+MP++ +KP++ +
Sbjct: 453 KDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDAVALQPTTEG 512
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-KFS 503
+ + +R T +FSATMPPAVERLARKYL P V IG AG+A + + Q V + E K +
Sbjct: 513 DWQGWRVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKA 572
Query: 504 RLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RL +L +G IVFVN KK ADMV K + + G TLH GKSQEQRE +L+ R
Sbjct: 573 RLIEILRTIGLPPPMIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRD 632
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+VLVATD+AGRGID+PDV+ VIN+ M IE Y HRIGRTGRAGKTGVA TFLT D
Sbjct: 633 GEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDD 692
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+V YDL+ + +S S + PELA+HEA++
Sbjct: 693 DEVMYDLRIEVEKSKMSKMNPELARHEAAR 722
>gi|195147728|ref|XP_002014827.1| GL19380 [Drosophila persimilis]
gi|194106780|gb|EDW28823.1| GL19380 [Drosophila persimilis]
Length = 437
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 257/439 (58%), Positives = 319/439 (72%), Gaps = 13/439 (2%)
Query: 243 GSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKT 302
G +IP P+R+W E PE++ +++VGYK P+PIQ AIP+GLQ RD+IG+AETGSGKT
Sbjct: 1 GGRIPNPIRSWNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKT 60
Query: 303 AAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
AF++P+L++I LP I E+ +GPYA++MAPTRELAQQIEEET+KF LGI+ V +
Sbjct: 61 LAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETIKFGQPLGIRTVVV 120
Query: 362 VGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
VGG S EEQGFR+R GCE+VIATPGRLID LE RY VLNQC Y+VLDEADRMIDMGFEP
Sbjct: 121 VGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPD 180
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLR 472
V +L+ MP +NLKP+ E+ E DE ++ YR T MF+ATMPPAVERLAR YLR
Sbjct: 181 VQKILEYMPVTNLKPDTEEAE-DENKLMENFYTKKKYRQTVMFTATMPPAVERLARSYLR 239
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAK 532
P V IG+ GK TE Q V MM E++K +L +L D I+FVN KK AD++AK
Sbjct: 240 RPSTVYIGSMGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAK 299
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
L+KLGY TLHGGK QEQRE +L ++ ++LVATDVAGRGIDI DV+ VINYDM
Sbjct: 300 GLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMA 359
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+IE YTHRIGRTGRAGKTG A +F+T D+ +FYDLKQ + S S PPEL H ++
Sbjct: 360 KSIEDYTHRIGRTGRAGKTGCAISFVTKDDSGLFYDLKQCVTASPVSTCPPELTNHPEAQ 419
Query: 652 FKPGTIPDRPPRRNDTVFA 670
KPGT+ + RR + +FA
Sbjct: 420 HKPGTVVTK-KRREEKIFA 437
>gi|388855958|emb|CCF50533.1| probable U5 snRNP 100 kD protein [Ustilago hordei]
Length = 691
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/459 (54%), Positives = 325/459 (70%), Gaps = 12/459 (2%)
Query: 206 YDTFDMRVD-RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
YD D R D +HWS K L EM ERDWRIFREDF IS +G IP+P+R+W E + +L
Sbjct: 219 YDPLDKRFDEKHWSGKSLSEMKERDWRIFREDFGISARGGNIPKPLRSWRESSIPATILS 278
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+E +GYK PSPIQ AIP+GLQ RD+IGIAETGSGKTA+F++P+L YIS+LP ++E +
Sbjct: 279 TIEEIGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKLNEHTK 338
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
A GP A+++ PTRELAQQIE ET KFA LG+ VSIVGG+ + +Q + +R G E++IAT
Sbjct: 339 ALGPQALILVPTRELAQQIETETNKFAGRLGLGCVSIVGGRDMNDQAYALRDGAEIIIAT 398
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 442
PGRL DC+ER VL+QC YVV+DEAD+M+DMGFEPQV +LD++P SNLKP++E E
Sbjct: 399 PGRLKDCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLPVSNLKPDSEVAEDP 458
Query: 443 --LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
D YR T ++SATMPP+VER+AR YLR P +T+G AG+A + Q V + E
Sbjct: 459 KGDDVVGRYRVTMLYSATMPPSVERMARVYLRRPATITVGDAGQAVGSVEQIVEFVPSEE 518
Query: 501 KFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
+R RL+ L + IVFVN KK AD ++ L + G+ ++TLH GK+QE RE +
Sbjct: 519 --ARRSRLISILQRSSHLVPIIVFVNQKKAADQLSSYLTRQGFYISTLHSGKTQELREEA 576
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L R +LVATD+AGRGID+P+V V+N+ MP NIE Y HRIGRTGRAGK G A T
Sbjct: 577 LAHLRDGTTQILVATDLAGRGIDVPNVGLVVNFAMPNNIEAYVHRIGRTGRAGKKGTAIT 636
Query: 617 FLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
FL D+D+F+DLKQ L +S S VP +LA+H A++ +P
Sbjct: 637 FLDQTDSDLFWDLKQELTKSKLSTVPQQLARHPAAQHRP 675
>gi|224118622|ref|XP_002317866.1| predicted protein [Populus trichocarpa]
gi|222858539|gb|EEE96086.1| predicted protein [Populus trichocarpa]
Length = 259
Score = 510 bits (1313), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/259 (93%), Positives = 252/259 (97%)
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
MIDMGFEPQV+GVLDAMPSSNLKPENEDEELDEK+IYRTTYMFSATMPPAVERLARKYLR
Sbjct: 1 MIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLR 60
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAK 532
NPVVVTIGTAGKAT+LI+QHV+MMKESEK RL RLL+E GDKTAIVFVNTKKNADMVAK
Sbjct: 61 NPVVVTIGTAGKATDLITQHVIMMKESEKSYRLNRLLEEAGDKTAIVFVNTKKNADMVAK 120
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
NLDKLG+RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP
Sbjct: 121 NLDKLGFRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 180
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKF 652
GNIEMYTHRIGRTGRAGKTGVATTFLT D+DVFYDLKQMLIQ+NSPVPPELAKHEASKF
Sbjct: 181 GNIEMYTHRIGRTGRAGKTGVATTFLTHGDSDVFYDLKQMLIQNNSPVPPELAKHEASKF 240
Query: 653 KPGTIPDRPPRRNDTVFAH 671
KPG IPDRPPRRNDTVFAH
Sbjct: 241 KPGGIPDRPPRRNDTVFAH 259
>gi|145540724|ref|XP_001456051.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423861|emb|CAK88654.1| unnamed protein product [Paramecium tetraurelia]
Length = 660
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/585 (44%), Positives = 374/585 (63%), Gaps = 58/585 (9%)
Query: 96 RELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLFG 153
+EL IK QYLG K KK+++KPSEKF+ F+F+W+ TEDTS D N LY N
Sbjct: 125 QELMHIKMQYLGLNKEKKKILKPSEKFKNIFNFEWDATEDTSIDFNPLYMN--------- 175
Query: 154 RGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRV 213
R +G+ + Q+ ++ P++ +
Sbjct: 176 RIIASGLHSKAQE--------------------DKDPDQLLS------------------ 197
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
HWS+K L +M RDWRIFRED +I KG ++P P+R W E +L L+ ++ + Y
Sbjct: 198 SDHWSKKSLGQMQPRDWRIFREDMDIIIKGGRVPNPIREWNEVQLPKNLMNSIRNLNYVK 257
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQM IP+GL+++D+IGIA TGSGK+AAF++P++TY+S LP ++ +GPYA++M
Sbjct: 258 PTPIQMQTIPIGLERKDMIGIAPTGSGKSAAFLIPLITYLSTLPKQDDKICKDGPYALIM 317
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
AP RELA QIE E K + ++ IVGG+ EEQ F +++G E++I TPGR+ D L
Sbjct: 318 APARELAIQIEAEFQKLSQGYNLRSFVIVGGRKEEEQEFHLKKGIEILIGTPGRIKDLLM 377
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE-DEELDEK------ 446
++Y VL QC+++VLDEAD+MID+GFE V +LD++ ++ +K E+E EL+EK
Sbjct: 378 KKYLVLEQCSWIVLDEADKMIDLGFEQDVNYILDSI-TTQMKSEDEIAAELEEKLAQAGE 436
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
R YR T++FSATMPP VE+LA++YLR ++IG G + I Q + M+ E+ K +RL
Sbjct: 437 RQYRVTHLFSATMPPQVEKLAKRYLRAFCFISIGEPGGGKKDIEQKIDMINEAAKKNRLL 496
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
+LL I+F N KK+ ++++K L+K GY HG K+Q+QRE ++EGF++K+ +
Sbjct: 497 QLLAS-NKPPIIIFANQKKSVEILSKTLEKYGYNSVVYHGSKTQQQREAAVEGFKSKKID 555
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+L+ATD+A RG+ + V VIN+D P NI+ + HR GRTGRAGK G+A TFLT D+D+F
Sbjct: 556 ILIATDLASRGLHVEGVQMVINFDAPKNIQDFIHRTGRTGRAGKRGLAVTFLTNSDSDLF 615
Query: 627 YDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFAH 671
YDLK+ LI+S VPPELA+H AS KPG++PD PRR + AH
Sbjct: 616 YDLKEYLIKSGQNVPPELAQHTASNQKPGSVPDNVPRRKQVILAH 660
>gi|343424844|emb|CBQ68382.1| probable U5 snRNP 100 kD protein [Sporisorium reilianum SRZ2]
Length = 683
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/458 (53%), Positives = 323/458 (70%), Gaps = 9/458 (1%)
Query: 206 YDTFDMRVD-RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
+D D R D HW+ K L +M ERDWRIFREDF IS +G IP+P+R+W E + +L
Sbjct: 210 HDPLDRRFDDTHWTSKTLAQMKERDWRIFREDFGISARGGNIPKPLRSWRESSIPASILS 269
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+ +GYK PSPIQ AIP+GLQ RD+IGIAETGSGKTA+F++P+L YIS+LP ++E +
Sbjct: 270 TIAEIGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKLNEHTK 329
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
A GP A+++ PTRELAQQIE ET KFA LG++ VSIVGG+ + +Q + +R G E+VIAT
Sbjct: 330 AFGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIAT 389
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN---EDE 441
PGRL DC+ER VL+QC YVV+DEAD+M+DMGFEPQV +LD++P SNLKP++ ED
Sbjct: 390 PGRLKDCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLPVSNLKPDSAVAEDP 449
Query: 442 ELDEKRI--YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM-KE 498
+ + YR T ++SATMPP VER+AR YLR P +TIG AG+A + Q V + E
Sbjct: 450 LSSQDAVGRYRVTMLYSATMPPTVERMARVYLRRPATITIGDAGQAVATVEQMVEFLPSE 509
Query: 499 SEKFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
+ +RL +L IVFVN KK AD ++ L + G+ +TLH GK+QE RE +L
Sbjct: 510 EARRARLTAILQRSSHLVPIIVFVNQKKAADQLSSYLARQGFYTSTLHSGKTQELREEAL 569
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
R +VLVATD+AGRGID+P+V V+N+ MP NIE Y HRIGRTGRAGK G A TF
Sbjct: 570 AALRAGTTHVLVATDLAGRGIDVPNVGLVVNFAMPNNIEAYIHRIGRTGRAGKQGTAITF 629
Query: 618 LTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
+ D+D+F+DLKQ L +S S VP +LA+H A++ KP
Sbjct: 630 VDQADSDLFWDLKQELSKSKLSSVPAQLARHPAAQHKP 667
>gi|392576681|gb|EIW69811.1| hypothetical protein TREMEDRAFT_38519 [Tremella mesenterica DSM
1558]
Length = 792
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 283/581 (48%), Positives = 372/581 (64%), Gaps = 55/581 (9%)
Query: 95 ERELELIKEQYLGSK--KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ--- 149
E EL I+ +YLG K + K RV K +K + FDW +DT+ AL Q ++
Sbjct: 187 EVELVNIRARYLGQKVNEKKPRVRKTQDK-KVIFDWNAADDTT----ALEQGTWTSEVKG 241
Query: 150 -----LLFG---RGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEE 201
++FG GF G RR Q AA+++ A AL+ +
Sbjct: 242 LGPGGIMFGGRLAGFDEGGKRRGQH--AAEDQ------------------HADALERRRA 281
Query: 202 AADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE 261
D DRHWS+K L EM +RDWRIFREDF+I +G IP P+R+W E + P+
Sbjct: 282 GKGNND------DRHWSDKPLSEMKDRDWRIFREDFSIQARGGSIPVPLRSWRESTIDPK 335
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
+L ++ +GYK PSPIQ AIP+GLQ RD+IGIA+TGSGKTAAFV+PML YIS LP + +
Sbjct: 336 VLNIIDEIGYKEPSPIQRQAIPIGLQTRDLIGIAKTGSGKTAAFVIPMLDYISHLPLLDD 395
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+N GPYA+++APTRELAQQIE E +FA LG VSI+GG+S+EEQ F +R G ++
Sbjct: 396 DNRHLGPYALILAPTRELAQQIEGEAARFAQPLGYVCVSIIGGRSVEEQQFALRNGAHII 455
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
IATPGRL + +++ V+ QC YVV+DEADRM+D+GFE + +LD+MP++ +KP++E
Sbjct: 456 IATPGRLKEMIDKSMVVMTQCRYVVMDEADRMVDLGFETDLNFILDSMPATFIKPDDEQA 515
Query: 442 ----ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMM 496
DE + +R T +FSATMPPAVERLAR YLR P VVTIGTAG+A + + Q V +
Sbjct: 516 LKGTGPDEFKGWRVTTLFSATMPPAVERLARNYLRRPAVVTIGTAGEAVDTVEQRVEFVT 575
Query: 497 KESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
E +K S+L +L G IVFVN KK ADMV + + + G T +H K+Q+QRE
Sbjct: 576 SEEKKKSKLIEILRTSGLPPPMIVFVNQKKTADMVLRYVHQSGKSATAIHSDKTQQQREQ 635
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+L+ R VLVATDVAGRGID+PDV+ VIN+ M IE Y HRIGRTGRAGK G+A
Sbjct: 636 ALQALRDGEVQVLVATDVAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKKGLAI 695
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP---PELAKHEASKFK 653
TFLT D +V ++LKQ + S SPV PELA+HEA+K K
Sbjct: 696 TFLTNDDEEVMFELKQEI--SKSPVSTMNPELARHEAAKQK 734
>gi|403335789|gb|EJY67078.1| DEAD-box ATP-dependent RNA helicase, putative [Oxytricha trifallax]
Length = 715
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/574 (45%), Positives = 371/574 (64%), Gaps = 40/574 (6%)
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSRDMNALYQNPHEAQLLF 152
+RE++ IK QYLG K KKRVIKPS+KF+ F F W+ +EDTS+D+N LY H+ +LLF
Sbjct: 148 DREVDQIKGQYLGIIKEKKRVIKPSDKFKQVFHFAWDASEDTSKDINPLYNQRHDPKLLF 207
Query: 153 GRGFRAGMDRREQ-KKLAAKNE-KEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFD 210
G+G G+D Q K+ AK E K++ + + ++ +EE
Sbjct: 208 GKGHLGGLDLEAQAKQNGAKVEGKQVDKYMGQRSSLEE---------------------- 245
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE-GKLTPELLRAVERV 269
+ +K LEEMTERDW+IFRED++I KG +IP P+R+W E L P L +
Sbjct: 246 ------YLKKPLEEMTERDWKIFREDYDIMRKGGRIPNPVRSWDEIENLHPILRDNISEC 299
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
GY P PIQM IP+G+ RD+IG+A TGSGK+AAF++P++ ++ ++PPI EE +GPY
Sbjct: 300 GYPRPMPIQMQTIPIGMNFRDLIGLAPTGSGKSAAFLIPLVNFLLKMPPIREELVQDGPY 359
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A++MAPTRELA QIE E K + ++ + +VGG+S EEQG I +G EVVI +PGR+
Sbjct: 360 AIIMAPTRELAIQIENEFRKLSADSHLRSIVVVGGKSAEEQGSSISRGVEVVIGSPGRIE 419
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---- 445
D ++RRY VLNQC +V+LDE D+MID+ E V +L+++PS+ K + E E +++
Sbjct: 420 DLVKRRYLVLNQCYHVILDEGDKMIDLDLEESVNFILESIPSNLQKSDKEREVMEQENQM 479
Query: 446 ---KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
++ +T +FSATM P +E+LARKYLR P ++IG G + I Q + MM ES+K
Sbjct: 480 IKGQKFMKTFVLFSATMLPQIEKLARKYLRFPAFISIGEPGGGKKDIEQRIEMMSESQKR 539
Query: 503 SRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
+RLQ+LLD+ ++FVN + + + ++ L K+GY V LHG ++QEQRE +L +
Sbjct: 540 NRLQQLLDKYRAPPILIFVNQRADTEHLSTFLTKVGYNVGALHGSRTQEQREQALNSLKK 599
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
++LV T+VA RG+DI V HVINY P NI Y HRIGRTGRAGK G+ATTFLT D
Sbjct: 600 GSLDILVCTNVAARGLDIDCVTHVINYHAPSNIVDYIHRIGRTGRAGKKGMATTFLTPGD 659
Query: 623 TDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGT 656
++YDLK+ L ++ VP ELA H A+KFK G
Sbjct: 660 EGIYYDLKKFLQDNDQHVPAELANHNAAKFKGGV 693
>gi|242081837|ref|XP_002445687.1| hypothetical protein SORBIDRAFT_07g024245 [Sorghum bicolor]
gi|241942037|gb|EES15182.1| hypothetical protein SORBIDRAFT_07g024245 [Sorghum bicolor]
Length = 410
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 245/377 (64%), Positives = 301/377 (79%), Gaps = 23/377 (6%)
Query: 287 QQRDVIGIAETGSGKTAAFVLPMLTYIS---RLPPISEENEA--EGPYAVVMAPTRELAQ 341
+Q V AE + A +P+L + +LPP ++ N+A EGP A+V+APTR+LAQ
Sbjct: 26 EQLPVFKKAEEACHQAAVGEVPLLIRLGEHHQLPPTTDGNQAAAEGPCALVLAPTRQLAQ 85
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP-GRLIDCLERRYAVLN 400
QIE+ET+KFA YLGI+VVS+VGG+ I EQGF+I+QG E+VIATP GRL+DCLE YAVLN
Sbjct: 86 QIEDETMKFASYLGIRVVSVVGGKPINEQGFKIKQGYEIVIATPAGRLLDCLENMYAVLN 145
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+CNYVVLDEADRMIDMGFEPQV V+DAMPSSNLKPENEDEELDEKR
Sbjct: 146 RCNYVVLDEADRMIDMGFEPQVAAVIDAMPSSNLKPENEDEELDEKR------------- 192
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVF 520
RLARKYLRNPVVVTIGT G+AT+L++Q+V+M+KESEK RLQ++L +LGDKTAIVF
Sbjct: 193 ----RLARKYLRNPVVVTIGTPGRATDLVTQNVIMVKESEKMLRLQKMLSDLGDKTAIVF 248
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
+TKK AD+ K+L K G+RV ++HG KSQ+QREISL+GFR R NVLVA+D+ RGID+
Sbjct: 249 CDTKKTADLRTKDLKKAGFRVMSIHGRKSQDQREISLDGFRNGRCNVLVASDILARGIDV 308
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
PDV HVI+Y+MP +IE THRIGR GRAGK GVAT+FLT +T++F+DLKQMLIQSNS V
Sbjct: 309 PDVGHVIDYEMPNSIEACTHRIGRKGRAGKKGVATSFLTLENTEIFFDLKQMLIQSNSHV 368
Query: 641 PPELAKHEASKFKPGTI 657
PPELA+HEASKF+PG++
Sbjct: 369 PPELARHEASKFRPGSV 385
>gi|353240957|emb|CCA72800.1| probable U5 snRNP 100 kD protein [Piriformospora indica DSM 11827]
Length = 724
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 273/576 (47%), Positives = 367/576 (63%), Gaps = 50/576 (8%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT-SRDMNALYQNPHE-AQLLFGR 154
EL+ I+ +YLG K KK V K +++ +F F W +DT + D A + + A ++FGR
Sbjct: 166 ELDAIRSRYLGVDKKKKPVRKMTDR-KFVFAWSAQDDTFAMDSPAAIGSQRQGAAVMFGR 224
Query: 155 GFRAGMDRREQKK--LAAKNEKEMREEI------RKKEGVEEKPEEAAALKLKEEAADLY 206
G AGM+ L ++ ++ + R+K V+E
Sbjct: 225 GHLAGMENTYTPSYPLPGRDGQDSSTTLDLTPAGRRKAPVDE------------------ 266
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
RHWSEK L EM +RDWRI + DF+IS +G IP P+R+W E + P++L +
Sbjct: 267 --------RHWSEKPLSEMKDRDWRILKADFSISARGGNIPYPLRSWDESSIPPQILDVI 318
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
R+GY+ P+PIQ AIP+GLQ RD+IGIAETGSGKTAAFV+PMLTYI +LPP+++EN
Sbjct: 319 ARIGYEQPTPIQRQAIPIGLQNRDLIGIAETGSGKTAAFVIPMLTYIGQLPPLTDENRHL 378
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPG 386
GPYA+++APTRELAQQIE ET K A LG K VSIVGG+++EEQ + +R+G E++IATPG
Sbjct: 379 GPYALILAPTRELAQQIEAETKKLASPLGYKCVSIVGGRAVEEQAYNLREGAEIIIATPG 438
Query: 387 RLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE----E 442
RL D ++R VL+QC YVV+DEADRM+ +GFE + +LDA+P+ LK EN E
Sbjct: 439 RLKDVIDRHVVVLSQCTYVVMDEADRMVHLGFEADLTFILDALPTDLLKGENAMEVDGMT 498
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKF 502
+ K R T +FSATMPPAVERLAR+YL+ + IG G+A E + Q V + EK
Sbjct: 499 ANSKARTRVTTLFSATMPPAVERLARQYLKKAATIAIGEVGRAVETVEQRVEFVGSEEK- 557
Query: 503 SRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
+ QRL+D L ++ ++ K+ K ++L +TLH GKSQEQRE +L+
Sbjct: 558 -KKQRLIDILNNEGFPPPSLSSSTRKRRLIWSPKISNELA--ASTLHSGKSQEQREAALQ 614
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
R +VLVATD+AGRGID+P+V+ VIN+ M IE Y HRIGRTGRAGK GVA TFL
Sbjct: 615 QLRNGEVDVLVATDLAGRGIDVPNVSLVINFQMSNTIEAYIHRIGRTGRAGKNGVAITFL 674
Query: 619 TFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
T D +V YDLKQ + +S S VPPEL +HEA++ K
Sbjct: 675 TNDDDEVMYDLKQEIKKSPISKVPPELERHEAAQQK 710
>gi|294460141|gb|ADE75653.1| unknown [Picea sitchensis]
Length = 259
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/259 (90%), Positives = 251/259 (96%)
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK IYRTTYMFSATMPPAVERLARKYLR
Sbjct: 1 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKTIYRTTYMFSATMPPAVERLARKYLR 60
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAK 532
NPVVVTIGTAGKATELI+QHV+M+K+ EK SRL+RLL++LGDKTAIVF+NTKK AD +A+
Sbjct: 61 NPVVVTIGTAGKATELITQHVMMLKDGEKMSRLERLLNDLGDKTAIVFINTKKTADSLAR 120
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
+LDK+GYRVTTLHGGK+QEQREISLEGFR KRYN+LVATDVAGRGIDIPDVAHVIN+DMP
Sbjct: 121 HLDKVGYRVTTLHGGKTQEQREISLEGFRNKRYNILVATDVAGRGIDIPDVAHVINFDMP 180
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKF 652
NIEMYTHRIGRTGRAGKTGVATTFLT HD+DVFYDLKQMLIQSNSPVPPELA+HEASKF
Sbjct: 181 SNIEMYTHRIGRTGRAGKTGVATTFLTHHDSDVFYDLKQMLIQSNSPVPPELARHEASKF 240
Query: 653 KPGTIPDRPPRRNDTVFAH 671
KPGTIPDRPPRRNDTVFAH
Sbjct: 241 KPGTIPDRPPRRNDTVFAH 259
>gi|440463368|gb|ELQ32951.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Magnaporthe
oryzae Y34]
gi|440491079|gb|ELQ70546.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Magnaporthe
oryzae P131]
Length = 674
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/450 (53%), Positives = 318/450 (70%), Gaps = 12/450 (2%)
Query: 217 WSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSP 276
W +K+L +MT RDWR+F+ + I KG+ IP PMR W E L L +++VGY P+P
Sbjct: 223 WQDKELSQMTTRDWRLFKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTP 282
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPT 336
+Q AAIP+ LQ RD+IGI++TGSGKTAAFVLPML+YI LPP++E + EGPYA+++APT
Sbjct: 283 VQRAAIPIALQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPT 342
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQ-SIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
RELA QI+ E +KFA +G VV ++G + +IEE F +R G E+++ATPGRL+DCLER
Sbjct: 343 RELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERH 402
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKR 447
VL+QC+YVVLDEADRM+D GFE + +L A+P SN KP++ D E L
Sbjct: 403 LLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNL 462
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV-MMKESEKFSRLQ 506
YR T M+SATMPP+VER+A+ YL++P +VTIGT G+A + + Q + ++ E E+ ++L+
Sbjct: 463 RYRQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLR 522
Query: 507 RLLDELGD-KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
+L+ G K IVFVNTK N D VAK+L + TLHG K+Q+QRE +L+ FR R
Sbjct: 523 AMLNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRT 582
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVA RG+DIPDV+ VIN++M G IE+YTHRIGRTGRAGK G+A TF D V
Sbjct: 583 NVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGV 642
Query: 626 FYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
Y LKQ++ +S S VPP L H ++ KP
Sbjct: 643 LYHLKQIMSKSQMSKVPPWLKDHPEAQSKP 672
>gi|389633817|ref|XP_003714561.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Magnaporthe
oryzae 70-15]
gi|152032663|sp|A4RK80.1|PRP28_MAGO7 RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|351646894|gb|EHA54754.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Magnaporthe
oryzae 70-15]
Length = 674
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/450 (53%), Positives = 318/450 (70%), Gaps = 12/450 (2%)
Query: 217 WSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSP 276
W +K+L +MT RDWR+F+ + I KG+ IP PMR W E L L +++VGY P+P
Sbjct: 223 WQDKELSQMTTRDWRLFKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTP 282
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPT 336
+Q AAIP+ LQ RD+IGI++TGSGKTAAFVLPML+YI LPP++E + EGPYA+++APT
Sbjct: 283 VQRAAIPIALQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPT 342
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQ-SIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
RELA QI+ E +KFA +G VV ++G + +IEE F +R G E+++ATPGRL+DCLER
Sbjct: 343 RELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERH 402
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKR 447
VL+QC+YVVLDEADRM+D GFE + +L A+P SN KP++ D E L
Sbjct: 403 LLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNL 462
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV-MMKESEKFSRLQ 506
YR T M+SATMPP+VER+A+ YL++P +VTIGT G+A + + Q + ++ E E+ ++L+
Sbjct: 463 RYRQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLR 522
Query: 507 RLLDELGD-KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
+L+ G K IVFVNTK N D VAK+L + TLHG K+Q+QRE +L+ FR R
Sbjct: 523 AMLNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRT 582
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVA RG+DIPDV+ VIN++M G IE+YTHRIGRTGRAGK G+A TF D V
Sbjct: 583 NVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGV 642
Query: 626 FYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
Y LKQ++ +S S VPP L H ++ KP
Sbjct: 643 LYHLKQIMSKSQMSKVPPWLKDHPEAQSKP 672
>gi|401887919|gb|EJT51893.1| Pre-mRNA splicing factor RNA helicase PRP28 [Trichosporon asahii
var. asahii CBS 2479]
Length = 707
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/451 (54%), Positives = 317/451 (70%), Gaps = 16/451 (3%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
DRHWSEK L +M ERDWRIFRED+NIS +G IP P+R+W E + +L V+++GY
Sbjct: 245 DRHWSEKPLGDMKERDWRIFREDYNISSRGGNIPLPLRSWRESAIPGPILDVVDQIGYTE 304
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
PSPIQ AIP+GLQ RD++GIA+TGSGKTAAF++PMLTYIS LPP++E+N GPYA+++
Sbjct: 305 PSPIQRQAIPIGLQNRDLVGIAKTGSGKTAAFLIPMLTYISHLPPLTEDNRHLGPYALIL 364
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KFA LG VSIVGG+S+EEQ F +R G ++IATPGR D ++
Sbjct: 365 APTRELAQQIEAEAEKFARKLGYICVSIVGGRSVEEQQFNLRNGSHIIIATPGRFKDMID 424
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP--------SSNLKPENEDEELDE 445
+ VL+QC Y+V+DEADRM+D+GFE + +LDAMP +S P N ++
Sbjct: 425 KSMIVLSQCRYIVMDEADRMVDIGFEHDLTFILDAMPKAYEKKDDASAAAPANGNQVGFT 484
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R T +FSATMPPAVERL RKYLR P VTIGTAG+A + + Q V + E+ +
Sbjct: 485 GE--RVTTLFSATMPPAVERLTRKYLRKPATVTIGTAGEAVDTVEQRVEFVHGGEE-KKK 541
Query: 506 QRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
R +D L + IVFVN K AD+VAK + + G+ VTTLH GK+QEQRE +L R
Sbjct: 542 ARFIDLLRNTDLPPPIIVFVNQKATADVVAKYVQQAGFSVTTLHSGKNQEQREAALGALR 601
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+VLVATD+AGRGID+PDV+ V+N+ M IE Y HRIGRTGRAGK+G+A TFL +
Sbjct: 602 EGHVDVLVATDLAGRGIDVPDVSMVVNWQMSDTIEKYIHRIGRTGRAGKSGLAHTFLDNN 661
Query: 622 DTDVFYDLKQMLIQS-NSPVPPELAKHEASK 651
D +V YDL+ + +S S + ELA+HEA++
Sbjct: 662 DAEVLYDLRLEIEKSKKSSMNQELARHEAAR 692
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 49/171 (28%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQ---------------------KRRQEQQQQLLSQP 52
KP FL+KA+R++LAL +R+E+ +Q +RRQ ++ +
Sbjct: 23 KPKFLSKAERQKLALAKREEEAREQRAKEEEERAERRRFEAEAEAERRRQASERYGAGRD 82
Query: 53 QTHGRNSSDSR---DRERERH------------------------RREREEEAKARERAR 85
GR+S DSR DR +R+ R+R E K R +
Sbjct: 83 GRDGRDSRDSRDPWDRHHDRNGGLDYRDHRDRDRDYDRRGGHGRDDRDRPPEKKGRRDDK 142
Query: 86 LEKLAERERERELELIKEQYLGSKK-PKKRVIKPSEKFRFSFDWENTEDTS 135
A + ELE+IK++YLG ++ KK ++ S F W+ +DTS
Sbjct: 143 SNGSAAPKDVDELEVIKKRYLGQQEVVKKPWMRKSTNKNAIFQWDEKDDTS 193
>gi|406699425|gb|EKD02628.1| Pre-mRNA splicing factor RNA helicase PRP28 [Trichosporon asahii
var. asahii CBS 8904]
Length = 707
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/451 (54%), Positives = 317/451 (70%), Gaps = 16/451 (3%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
DRHWSEK L +M ERDWRIFRED+NIS +G IP P+R+W E + +L V+++GY
Sbjct: 245 DRHWSEKPLGDMKERDWRIFREDYNISSRGGNIPLPLRSWRESAIPGPILDVVDQIGYTE 304
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
PSPIQ AIP+GLQ RD++GIA+TGSGKTAAF++PMLTYIS LPP++E+N GPYA+++
Sbjct: 305 PSPIQRQAIPIGLQNRDLVGIAKTGSGKTAAFLIPMLTYISHLPPLTEDNRHLGPYALIL 364
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KFA LG VSIVGG+S+EEQ F +R G ++IATPGR D ++
Sbjct: 365 APTRELAQQIEAEAEKFARKLGYICVSIVGGRSVEEQQFNLRNGSHIIIATPGRFKDMID 424
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP--------SSNLKPENEDEELDE 445
+ VL+QC Y+V+DEADRM+D+GFE + +LDAMP +S P N ++
Sbjct: 425 KSMIVLSQCRYIVMDEADRMVDIGFEHDLTFILDAMPKAYEKKDDASAAAPANGNQVGFT 484
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R T +FSATMPPAVERL RKYLR P VTIGTAG+A + + Q V + E+ +
Sbjct: 485 GE--RVTTLFSATMPPAVERLTRKYLRKPATVTIGTAGEAVDTVEQRVEFVHGGEE-KKK 541
Query: 506 QRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
R +D L + IVFVN K AD+VAK + + G+ VTTLH GK+QEQRE +L R
Sbjct: 542 ARFIDLLRNTDLPPPIIVFVNQKATADVVAKYVQQAGFSVTTLHSGKNQEQREAALGALR 601
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+VLVATD+AGRGID+PDV+ V+N+ M IE Y HRIGRTGRAGK+G+A TFL +
Sbjct: 602 EGHVDVLVATDLAGRGIDVPDVSMVVNWQMSDTIEKYIHRIGRTGRAGKSGLAHTFLDNN 661
Query: 622 DTDVFYDLKQMLIQS-NSPVPPELAKHEASK 651
D +V YDL+ + +S S + ELA+HEA++
Sbjct: 662 DAEVLYDLRLEIEKSKKSSMNQELARHEAAR 692
>gi|380690627|gb|AFD93382.1| DEAD box ATP-dependent RNA helicase, partial [Cydia pomonella]
Length = 459
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/466 (54%), Positives = 324/466 (69%), Gaps = 17/466 (3%)
Query: 131 TEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKP 190
+EDTS D NALY++ H+ Q FGRG AG+D + QKK +K + E+ R+ E +E+
Sbjct: 2 SEDTSNDYNALYKDRHQVQF-FGRGHIAGIDIKAQKKDHSKFYGNLLEK-RRTELEKEQE 59
Query: 191 EEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPM 250
+ K+E +D DRHWSEK +EMTERDWRIFRED+NI+ KG KIP P+
Sbjct: 60 KLRLKKVKKKEDKQKWD------DRHWSEKDQDEMTERDWRIFREDYNITIKGGKIPNPI 113
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
R+W E +++ + +VGYK+P+PIQ AIP+GLQ RD+IG+AETGSGKT AF++P+L
Sbjct: 114 RSWKEAGFHSDIMDIINKVGYKSPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLL 173
Query: 311 TYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
T+I LP E+ +GPYA+++APTRELAQQIEEET KF LGI V +VGG S EE
Sbjct: 174 TWIQSLPKNERMEDADQGPYAIILAPTRELAQQIEEETNKFGVPLGITSVVVVGGLSREE 233
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
QGF++R GCE+VIATPGRLID LE RY VLN+C YVVLDEADRMIDMGFEP V +L+ M
Sbjct: 234 QGFKLRLGCEIVIATPGRLIDVLENRYLVLNRCTYVVLDEADRMIDMGFEPDVQKILEYM 293
Query: 430 PSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGT 481
P SN+KP+ + E + K+ YR T MF+ATMPPAVERLAR YLR P +V IG+
Sbjct: 294 PVSNIKPDTDAAEDASVLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPAIVYIGS 353
Query: 482 AGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRV 541
GK + Q V M+ E+E+ +L +L + I+FVN KK AD++AK L+KLG+
Sbjct: 354 VGKPVDRTEQVVYMIGENEERRKLTEILQRNVEPPIIIFVNQKKGADVLAKGLEKLGFNA 413
Query: 542 TTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
TLHGGK QEQR+ +L + ++LVATDVAGRGIDI DV+ VI
Sbjct: 414 CTLHGGKGQEQRDFALASLKNGTKDILVATDVAGRGIDIKDVSMVI 459
>gi|50557160|ref|XP_505988.1| YALI0F28391p [Yarrowia lipolytica]
gi|74659615|sp|Q6C024.1|PRP28_YARLI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49651858|emb|CAG78800.1| YALI0F28391p [Yarrowia lipolytica CLIB122]
Length = 575
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 236/450 (52%), Positives = 323/450 (71%), Gaps = 12/450 (2%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGS-KIPRPMRNWAEGKLTPELLR-AVERVGY 271
D HWS+K +E MT RDWRIF+ED++I KG IP P+R+W E K P ++R + R+GY
Sbjct: 124 DAHWSDKPVESMTSRDWRIFKEDYSIVTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGY 183
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K P+PIQ AAIP+ L RDVIG+AETGSGKTA+F++P+++YI LP + E ++ GPY +
Sbjct: 184 KEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGL 243
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTRELA QI++E VKF LG KVVS+VGG S +EQ +++G E+++ATPGRL+D
Sbjct: 244 ILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDV 303
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---LDEKRI 448
++RR VLNQC YVV+DEADRM+DMGFE QV VL ++PSSN KP++++ E R
Sbjct: 304 IDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRR 363
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRL 508
YR T M++ATMP A+E+LA+KYLR P +VTIG+AG+A ++Q V + EK R +RL
Sbjct: 364 YRQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLNTDEK--RKRRL 421
Query: 509 LDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
LD + + +VF+N K++ + V+ L G+R +HGGK QEQRE +++ +
Sbjct: 422 LDIISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGA 481
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+VLVATDVAGRG+DIP+V+ V+N+ M NIE YTHRIGRTGRAGK G A TFL D D
Sbjct: 482 VDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTFLGQEDDD 541
Query: 625 VFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
V ++LKQM+ +S SP EL++H A++ K
Sbjct: 542 VLFELKQMISRSEASPNNQELSRHPAARMK 571
>gi|226291622|gb|EEH47050.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28
[Paracoccidioides brasiliensis Pb18]
Length = 443
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/420 (56%), Positives = 302/420 (71%), Gaps = 17/420 (4%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
MR+WAE L LL +++VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+
Sbjct: 1 MRSWAESGLPKRLLSIIDKVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPL 60
Query: 310 LTYISRLPPISE--ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSI 367
L YI LP + E +GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+
Sbjct: 61 LVYIGELPRLDEFEWRRNDGPYAIILAPTRELAQQIEIEAKKFSTPLGFNVVSIVGGHSL 120
Query: 368 EEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD 427
EEQ + +R G E++IATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LD
Sbjct: 121 EEQAYSLRNGAEIIIATPGRLVDCIERRMIVLSQCCYVIMDEADRMIDLGFEEPVNKILD 180
Query: 428 AMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
A+P +N KP+ ED E + K YR T M++ATMP AVER+ARKYLR P +VTI
Sbjct: 181 ALPVANEKPDTEDAENPQAMSQHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTI 240
Query: 480 GTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLD 535
G G+A + + Q V + +K R +RL + L + IVFVN K+N D VA+++
Sbjct: 241 GNVGEAVDTVEQRVEFVSGEDK--RKKRLAEILASREFRPPIIVFVNIKRNCDAVARDIK 298
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
+GY TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NI
Sbjct: 299 NMGYSSVTLHGSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNI 358
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E YTHRIGRTGRAGK+GVA TFL D+DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 359 ESYTHRIGRTGRAGKSGVAITFLGNEDSDVLYDLKQMLMKSSISRVPEELRKHEAAQSKP 418
>gi|300120104|emb|CBK19658.2| unnamed protein product [Blastocystis hominis]
Length = 620
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/584 (43%), Positives = 363/584 (62%), Gaps = 42/584 (7%)
Query: 101 IKEQYLGSKKPKKRVIKPSEKFRFSFD----WENTEDTSRDMNALYQNPHEAQLLFGRGF 156
IKEQ++G++K +R +F+ S D W N +DTS N LY + L FG+G+
Sbjct: 19 IKEQFIGNEKRHRR-----PRFKRSGDLQMEWSNEDDTSEKDNPLYAKRAKVHLAFGKGY 73
Query: 157 RAGMDRREQKK--------LAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
AGMD R+Q+K L+ + + E I + EE + + + + +T
Sbjct: 74 VAGMDMRQQRKDNEYMESLLSIRRQAERERTIPASQNAEELNRQLVE-TIHKRQMEKDET 132
Query: 209 FDMRVD----RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
+R HWSEK+L++MT+RDWRI +EDF I +G+K P+R W+E + P +LR
Sbjct: 133 ASVRSGAGHGSHWSEKELKDMTQRDWRIMKEDFEIRVQGAKQINPLRFWSEAAVHPAILR 192
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE-EN 323
A+E +G+K P+PIQ AIP+ L+ D+IGIA+TGSGKT AFV+PML Y+ + P + ++
Sbjct: 193 AIETLGFKEPTPIQRQAIPIELKGMDMIGIAKTGSGKTCAFVVPMLQYVIQAPIETRLQS 252
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLG-----------IKVVSIVGGQSIEEQGF 372
+ +GP AVVMAPTRELA+QI ++ K A + I++ +VGG+SI EQ
Sbjct: 253 KEQGPLAVVMAPTRELAKQIRDDAEKLAQFCVDERLAQSRSPRIRIACMVGGESIVEQSS 312
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
+ GC+++I TPGRL+DCLER + VLNQ NY+VLDEADRMID GFE V V+DAM S+
Sbjct: 313 FLSNGCDILIGTPGRLLDCLERHFVVLNQTNYIVLDEADRMIDEGFEESVNAVMDAMGST 372
Query: 433 NLKPENEDEE------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
E ED E +YRTT MFSATMPP VE +A++Y+R PV VTIGT T
Sbjct: 373 LKSEEEEDIEKAAEGVASLTNMYRTTIMFSATMPPKVEAIAKRYMRCPVQVTIGTPSGTT 432
Query: 487 EL-ISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
++ I Q + M++ES+K S L +++ + AIVF N K+ D V ++L G+R L
Sbjct: 433 KVDIKQIINMVRESDKPSMLLKIIRN-NETPAIVFCNRKETVDTVTRSLHDSGHRTVALR 491
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
GG Q +RE +LE FR Y+++VAT+VA RG+DI V V+NYDMP ++E+Y HRIGRT
Sbjct: 492 GGIQQSRREEALEDFRRGVYDIMVATNVAARGLDIKGVKLVVNYDMPDSLELYIHRIGRT 551
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
GRAG TG+A + +T D+ +F DL + L + +P +L +H+
Sbjct: 552 GRAGATGLAVSLVTEKDSALFPDLVEYLKKEKQQIPIDLERHKV 595
>gi|209882078|ref|XP_002142476.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209558082|gb|EEA08127.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 538
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/563 (44%), Positives = 349/563 (61%), Gaps = 68/563 (12%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD-MNALYQNPHEAQLLFGRG 155
++E IK Y+G KK + + ++ K F F+W+ +EDT ++ N LY+N
Sbjct: 26 QIEQIKSFYIGQKK-RSKALESRHKRIFQFEWDTSEDTLKNESNILYKN----------- 73
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
+L K MR E + E D
Sbjct: 74 -----------RLKPNVAKVMRIEDNQPSNTEVS------------------------DT 98
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK---LTPELLRAVERVGYK 272
HWS KK EMT RDWRIF+ED +IS +GS IP P+RNW E + + ELL +++ +
Sbjct: 99 HWSYKKRGEMTARDWRIFQEDHSISTRGSNIPDPIRNWNECEDIGIPTELLSSIK---HD 155
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
P+ IQM IP+G+Q RD+IGIAETGSGKT AF+LP+L+Y+ +LP ++ + +GPY ++
Sbjct: 156 KPTSIQMQCIPIGIQMRDLIGIAETGSGKTLAFLLPLLSYVYKLPLLNFDTAQDGPYGLI 215
Query: 333 MAPTRELAQQIEEETVKFAHY-LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
+AP RELA QIE E K +GI+ +SIVGG+S+E+Q F +R+G E++IATPGR+ DC
Sbjct: 216 LAPARELALQIELEAQKLLKKEIGIRTLSIVGGRSVEKQAFELRRGVEIIIATPGRMRDC 275
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK----- 446
LE+ VL QCNY++LDEADRM+DMGFE + +LD +P++ E EE + K
Sbjct: 276 LEKSLTVLTQCNYIILDEADRMVDMGFEDCLNYILDQIPAN---YERGSEEGNTKILKNR 332
Query: 447 ---RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFS 503
R +R T MFSATM VE++ARKYL+ P+ VTIG G + I Q + + E++K S
Sbjct: 333 YGCRNHRITQMFSATMQSEVEKIARKYLKFPLYVTIGDMGSGKKSIQQILNFISENKKQS 392
Query: 504 RLQRLLD--ELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
L +L+ E I+FVN KK D+V +++ G++V LHGGK QEQRE +L FR
Sbjct: 393 TLINVLNNYEYAIPPIIIFVNQKKTVDIVCRSIASNGFKVIGLHGGKIQEQRENNLNLFR 452
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
Y++LVATDVAGRGIDI +V VINYD+P I+ YTHRIGRTGRAGK+GVA +F+T
Sbjct: 453 NGIYDILVATDVAGRGIDIANVNLVINYDVPSTIDTYTHRIGRTGRAGKSGVAISFVTQQ 512
Query: 622 DTDVFYDLKQMLIQSNSPVPPEL 644
D+++F +LK++LI +N+ VP EL
Sbjct: 513 DSNLFSELKKILISTNNIVPAEL 535
>gi|290987818|ref|XP_002676619.1| predicted protein [Naegleria gruberi]
gi|284090222|gb|EFC43875.1| predicted protein [Naegleria gruberi]
Length = 493
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/540 (42%), Positives = 334/540 (61%), Gaps = 68/540 (12%)
Query: 117 KPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEM 176
+ +EK + SF+W+ +DT+ D N++ + H KN +
Sbjct: 3 RTNEKTKISFEWDEKDDTT-DKNSIISSSHST---------------------VKNNQ-- 38
Query: 177 REEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRED 236
+++IRK K+++E R+W+EK + EMT+RDWRIFRED
Sbjct: 39 KKKIRKD-------------KIEDE-------------RNWTEKSVNEMTDRDWRIFRED 72
Query: 237 FNISYKGSKIPRPMRNWAEGKLTP-ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
F+I KG ++P P+R+W E L P E++ A+ + +K P+ +Q IP+ + D++G+A
Sbjct: 73 FDIVVKGGRVPPPLRSWDETTLLPLEIINAITDLKFKEPTAVQKQCIPIAMNGIDLVGLA 132
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG 355
ETGSGKTA++++PM I++LP +++E +GPY +++ PTRELA+QIE E K+A
Sbjct: 133 ETGSGKTASYIIPMCCQIAKLPRMNDEIAKDGPYGLILVPTRELAEQIEREATKYARQFE 192
Query: 356 IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMID 415
+V +I+GG SIE+Q IR GCE+++ATPGRLIDCL VLNQC+++VLDEAD+MI+
Sbjct: 193 FRVQAIIGGVSIEKQSRLIRGGCEILVATPGRLIDCLNNSIVVLNQCHFIVLDEADKMIE 252
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
M FE V +L+ MP+ I R T +FSATMPP VE +A KYL+ V
Sbjct: 253 MNFEKDVNTILENMPT---------------HIQRQTMLFSATMPPEVENIAMKYLKKRV 297
Query: 476 VVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V +G G+A E I Q V+ +K E+ K +L LL + D IVF N KK D +AK +
Sbjct: 298 TVAVGEVGRAVERIEQEVMWIKHENAKRDKLLELLYD-ADPPVIVFCNLKKEVDAIAKFV 356
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G+R T++HG KSQE R +LE F++ +++V+VATDV GRGIDI V V+NY +P
Sbjct: 357 SNAGFRSTSIHGNKSQEARNSALEAFKSGKFDVIVATDVLGRGIDISGVTLVVNYSLPKT 416
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKP 654
I YTHRIGRTGRAG+TG A +FLT DT++ YDLK+ML + + VP ELA+H ++ KP
Sbjct: 417 ISAYTHRIGRTGRAGRTGRAVSFLTKDDTEIMYDLKKMLESTKNTVPEELAQHPSAAQKP 476
>gi|320583326|gb|EFW97541.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ogataea
parapolymorpha DL-1]
Length = 533
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/444 (49%), Positives = 308/444 (69%), Gaps = 12/444 (2%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D HWSEK+L +MT+RDWRI RED+NIS KG K+ P+R W E +++P +L+ +E +GY
Sbjct: 91 DVHWSEKELSKMTDRDWRIMREDYNISTKGGKLENPLRKWEESQISPLILQQLEALGYTE 150
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQ AA+P GL RD++GIAETGSGKT AF++P + YI +LP + EGPY +++
Sbjct: 151 PTPIQRAAVPNGLTGRDLVGIAETGSGKTLAFLIPSVNYILQLPRL---GRFEGPYVLIL 207
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
PTRELA QIE E KFA LG V+S++GG S +E ++ +G EV+IATPGRL+DCLE
Sbjct: 208 VPTRELALQIEREFSKFAS-LGFDVISLIGGHSYDEHAEKLERGVEVIIATPGRLVDCLE 266
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
++ L++C ++V+DEADRMIDMGFE + +L+++P + P L RTT
Sbjct: 267 QQLVSLDRCFFLVMDEADRMIDMGFENDLNKILESLPDGSENPHY----LGSGEPKRTTM 322
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE--KFSRLQRLLDE 511
MF+ATMPP +E+++ KYL+NP V +G G A + + Q + + +S+ + LQ++L
Sbjct: 323 MFTATMPPQIEKISAKYLKNPGTVMVGEVGGAVDSVRQEAIQVDDSDEKRLQMLQKVLTR 382
Query: 512 -LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVA 570
+ I+FVN +K +MVA+ L++LG+ T+HG K+QEQRE +++ + R ++LVA
Sbjct: 383 GIYSPPIIIFVNFRKTCEMVAEFLEQLGFNAVTMHGSKTQEQREYAIQQIKEGRSDILVA 442
Query: 571 TDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLK 630
TDVAGRGIDIPDV+ V+N+ M NIE YTHRIGRTGRAGK G A TF + D DV Y+LK
Sbjct: 443 TDVAGRGIDIPDVSLVVNFQMAKNIEDYTHRIGRTGRAGKEGTAITFWSAADADVLYNLK 502
Query: 631 QMLIQSN-SPVPPELAKHEASKFK 653
QM+ +S S P EL +H A++ K
Sbjct: 503 QMITKSPVSRCPEELRRHPAAQKK 526
>gi|313234298|emb|CBY10365.1| unnamed protein product [Oikopleura dioica]
Length = 408
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/413 (53%), Positives = 287/413 (69%), Gaps = 23/413 (5%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
MR W E + +L+ + GYK+P+PIQ AIP+G+Q RD+IG+AETGSGKT AF++P+
Sbjct: 1 MRYWKESIIPENILKIISDAGYKDPTPIQRQAIPIGMQNRDIIGVAETGSGKTLAFLVPL 60
Query: 310 LTYISRLP-PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
L +I LP I E+ +GPYA+++APTRELA QIEEE VKF LGI+ V+++GG S E
Sbjct: 61 LVWIDSLPRNIRVEDADKGPYAMILAPTRELATQIEEEVVKFGSPLGIRSVAVIGGASRE 120
Query: 369 EQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDA 428
EQG ++R GCE+VIATPGRLID +E RY VL+QC Y+VLDEADRMIDMGFEP+V +L
Sbjct: 121 EQGLKLRMGCEIVIATPGRLIDVIENRYLVLSQCTYIVLDEADRMIDMGFEPEVQKILSH 180
Query: 429 MPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL 488
MP +R T MF+ATMPP VER+A+ ++R P V IG+ GKA +
Sbjct: 181 MP------------------FRQTVMFTATMPPPVERIAKTFMRRPCTVYIGSVGKAADR 222
Query: 489 ISQHVVMMKESEKFSRLQRLLDE---LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
I Q + + +K ++ +L++ L IVFVN KK D++A+ L+K GY +LH
Sbjct: 223 IVQKAFFVPDGQKAKKMISILEDENCLEQGPVIVFVNQKKGCDVLARQLEKYGYDAISLH 282
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
GGK Q+QR+ +L + NVLVATDVAGRGIDI DV+ ++NYDM NIE YTHRIGRT
Sbjct: 283 GGKGQDQRDYALACIKNGEKNVLVATDVAGRGIDIKDVSLILNYDMAKNIEDYTHRIGRT 342
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPGTI 657
GRAGK+G A TFLT D+ FYDL+QMLI+S S PPEL +H ++ KPGTI
Sbjct: 343 GRAGKSGKAVTFLTQDDSHNFYDLRQMLIESECSSCPPELDRHPEAQQKPGTI 395
>gi|126644819|ref|XP_001388126.1| U5 snRNP 100 kD protein [Cryptosporidium parvum Iowa II]
gi|126117354|gb|EAZ51454.1| U5 snRNP 100 kD protein, putative [Cryptosporidium parvum Iowa II]
gi|323509541|dbj|BAJ77663.1| cgd3_3690 [Cryptosporidium parvum]
Length = 529
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/528 (43%), Positives = 329/528 (62%), Gaps = 63/528 (11%)
Query: 124 FSFDWENTEDT-SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK 182
F+W N EDT S N LY M+R +K+ ++ RK
Sbjct: 55 LQFEWSNNEDTFSLGSNELY-----------------MNRLNIEKMLSE---------RK 88
Query: 183 KEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYK 242
K+G+ ++ + +E +DL FDM TERDW+IFRED++I+ +
Sbjct: 89 KKGIRKEDSNGKNDEFLDEKSDL-GYFDM--------------TERDWKIFREDYSINVR 133
Query: 243 GSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKT 302
G +P P+RNW + + + +GY+ P+PIQM IP+GL+ RD+IGIAETGSGKT
Sbjct: 134 GKDVPNPIRNWKDCHVLEIQTELIRNIGYEKPTPIQMQCIPIGLKLRDMIGIAETGSGKT 193
Query: 303 AAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKF---AHYLG-IKV 358
AF++P+++Y+ P + + EGPY +++AP RELA QIE+E K H L I+
Sbjct: 194 IAFLIPLISYVGNKPILDYKTSQEGPYGLILAPARELALQIEDEAQKLLNKTHELKRIRT 253
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
+SIVGG++I++Q F +R+G E++IATPGR+ DCLE+ VL QC+YV+LDEADRMID+GF
Sbjct: 254 LSIVGGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMIDLGF 313
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
+ + +LD +P PE I RTT+MFSATM +E +A++YL +P+ VT
Sbjct: 314 QDSLNFILDQIP-----PE----------IQRTTHMFSATMQKELENIAKRYLNSPINVT 358
Query: 479 IGTAGKATELISQHVVMMKESEKFSRLQRLLD--ELGDKTAIVFVNTKKNADMVAKNLDK 536
IG G + I Q + + E++K S L L+ EL IVF+N KK D+V + +
Sbjct: 359 IGDIGAGKKSIQQILNFISENKKKSTLINTLNNKELAVPPIIVFLNQKKMVDIVCREIVS 418
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
G++ T+LHGGK QE RE SL F++ +++LV+TDVAGRGIDI ++ VINYD P +I+
Sbjct: 419 HGFKATSLHGGKMQEVRENSLNLFKSGVFDILVSTDVAGRGIDINNINLVINYDFPKSID 478
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YTHRIGRTGRAGK G+A +F+T D+ +F +LK++L+ SN+P+P EL
Sbjct: 479 TYTHRIGRTGRAGKNGIAISFITPEDSGLFPELKKILLTSNNPIPNEL 526
>gi|341888469|gb|EGT44404.1| CBN-DDX-23 protein [Caenorhabditis brenneri]
Length = 574
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/405 (54%), Positives = 282/405 (69%), Gaps = 19/405 (4%)
Query: 101 IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM 160
+K++YLG +K KK+ + + +F FDW+ EDTS+D N LYQ+ HE Q +GRG AGM
Sbjct: 167 VKDRYLGKQKEKKKRGRRLHEKKFVFDWDAGEDTSQDYNKLYQSRHEIQF-YGRGSVAGM 225
Query: 161 DRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEK 220
D QKK +EM E R+ G +E+ + ++K+E +D DRHW K
Sbjct: 226 DVNTQKKEKNSFYQEMME-ARRTAGEKEQEKNRLEKEMKKEKKVAHD------DRHWRMK 278
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+L EMT+RDWRIFREDFNIS KG K+PRP+RNW E E+ +AV +GY P+PIQ
Sbjct: 279 QLHEMTDRDWRIFREDFNISIKGGKVPRPLRNWEEAGFPQEVYQAVREIGYLEPTPIQRQ 338
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS-EENEAEGPYAVVMAPTREL 339
AIP+GLQ RDVIG+AETGSGKTAAF+LP+L +I+ LP + +E+ GPYA++MAPTREL
Sbjct: 339 AIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDNGPYAIIMAPTREL 398
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQIEEET KF LGIK VS++GG S EEQG ++R G EVVIATPGRL+D LE RY +L
Sbjct: 399 AQQIEEETNKFGKLLGIKTVSVIGGASREEQGMKLRMGVEVVIATPGRLLDVLENRYLLL 458
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YR 450
NQC+YV+LDEADRM+DMGFEP V VL+ +PSSN K ++ DE DE + YR
Sbjct: 459 NQCSYVILDEADRMLDMGFEPDVQKVLEYLPSSNQK-KDTDEFDDEAALMKGFETREKYR 517
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVM 495
T MF+ATM PA+ERLAR+YLR P VV IG+ GK TE + Q +
Sbjct: 518 QTVMFTATMSPAIERLARQYLRRPAVVHIGSVGKPTERVEQVCIF 562
>gi|164655062|ref|XP_001728662.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
gi|159102545|gb|EDP41448.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
Length = 623
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/535 (44%), Positives = 312/535 (58%), Gaps = 59/535 (11%)
Query: 123 RFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRK 182
RF F+W +DTS D E LL GR AG+D E + L K+ MR +
Sbjct: 137 RFQFEWSADDDTS-DARVAGDARVEEVLLRGR---AGLDGSE-RSLTGKST--MRSTL-- 187
Query: 183 KEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYK 242
EKP W+EK L EM RDWRIFRED+ I +
Sbjct: 188 ----AEKP--------------------------WTEKSLSEMRPRDWRIFREDYQIQVR 217
Query: 243 GSK-IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
G + +P P+R W E ++ +L A+E +GY+ P+ IQ AIP+GL RD+IG+AETGSGK
Sbjct: 218 GGEDVPPPLRTWRESRIPGAILDAIEAMGYREPTSIQRQAIPIGLIPRDLIGLAETGSGK 277
Query: 302 TAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
TA+FV+PML Y+ P ++ + GPY +++APTRELA QIE ET KFA L I+VVS+
Sbjct: 278 TASFVVPMLAYVMAQPRMAPGDVYMGPYGLILAPTRELALQIEAETRKFAARLQIQVVSL 337
Query: 362 VGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
VGG+ + EQ F + G E+VIATPGRL DCLER VL QC+Y+V+DEADRM+DM +E
Sbjct: 338 VGGRDLGEQAFHLNDGAEIVIATPGRLQDCLERHMLVLGQCHYLVMDEADRMVDMNYEEA 397
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGT 481
+ +LD++P++ RTT ++SATMPP V+++AR YL PV VTIG
Sbjct: 398 LHYILDSLPTT-----------------RTTMLYSATMPPTVDKIARTYLTRPVTVTIGQ 440
Query: 482 AGKATELISQHVVMM-KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYR 540
AG+A I Q V + E ++ RL +LD IVFVN K NAD+V K+L + G+
Sbjct: 441 AGQAVGTIEQCVEFVDSEEDRQQRLLHVLDSGFAPPMIVFVNQKANADLVGKDLRRAGWN 500
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
V LH G SQ QRE ++ R VL TD+ RGID+PDV+ V+NY P Y H
Sbjct: 501 VAVLHSGLSQPQREAAIASLRDGYNEVLCCTDIGARGIDLPDVSLVVNYQFPTQFASYIH 560
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
RIGRTGRAGK G A +F+ D FY L+ L +S S VP LA H A+ P
Sbjct: 561 RIGRTGRAGKKGHAMSFVNDDDAQHFYALRLELAKSPVSSVPGALANHSAALQAP 615
>gi|167392680|ref|XP_001740252.1| DEAD box ATP-dependent RNA helicase [Entamoeba dispar SAW760]
gi|165895712|gb|EDR23341.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba dispar
SAW760]
Length = 585
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/559 (39%), Positives = 333/559 (59%), Gaps = 44/559 (7%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFS-----FDWENTEDTSRDMNALYQNPHEAQLL 151
ELE I+E Y G+ K VIKPSEKF+ + EDT+ D+N LY NP + Q L
Sbjct: 49 ELEQIREHYRGNNKESNTVIKPSEKFKVMKINDLLMTKEEEDTTTDLNDLYNNPIDFQPL 108
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDM 211
FGRG G+D + + E + + ++ KP
Sbjct: 109 FGRGNCGGLDIVIKSNTINLTKGESQNGLNTLNKIKTKP--------------------- 147
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
L +M E DWRI RE+ NI +++ +P+R W + + LL+ ++ Y
Sbjct: 148 ----------LNQMNENDWRIIRENLNIFVNNNEVIKPLRKWDDMNVCDNLLQLIKNT-Y 196
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
+ P+PIQ A+IP+ L+ RD+I +AETG+GKT A+++P++ ++ +LP ++EE A GPYA+
Sbjct: 197 ETPTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYAL 256
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTRELA QI++ET+K A G++V +GG+SI+ Q + G E+V+A PGRL D
Sbjct: 257 ILAPTRELALQIQQETLKLATPFGLRVCCCIGGESIQPQIEELSNGAEIVVAAPGRLKDL 316
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI--- 448
L + Y VL QC +VVLDEAD+MID+G + QV + +PS E ++++
Sbjct: 317 LSQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSELPSVKDGSTEEIISMEKENASGN 376
Query: 449 --YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
RTT+M+SATMP +E++ +YLR P+ ++IG G E + Q+VV ++++ K +L
Sbjct: 377 PSTRTTFMYSATMPSTLEKITTEYLRRPITISIGKTGNVAENVKQNVVWVEDNMKKRKLV 436
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
+++ T IVFVN +K + + L+K +HGGK Q +R +LEGF+ K+Y
Sbjct: 437 QVIKSSSPPT-IVFVNQQKTVEEICLLLEKEKINCVGIHGGKRQIERTDALEGFKRKKYP 495
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD-TDV 625
V+VAT+V RGIDI VA+VINY+MP IE YTHR+GRTGRAGK G A TF+ +D +V
Sbjct: 496 VMVATNVLSRGIDIESVANVINYEMPQKIEEYTHRVGRTGRAGKGGNAITFINENDGKEV 555
Query: 626 FYDLKQMLIQSNSPVPPEL 644
L+Q+L+QS + +P EL
Sbjct: 556 LNQLRQILVQSRNSIPKEL 574
>gi|223999867|ref|XP_002289606.1| U5 small nuclear ribonucleoprotein, RNA helicase [Thalassiosira
pseudonana CCMP1335]
gi|220974814|gb|EED93143.1| U5 small nuclear ribonucleoprotein, RNA helicase [Thalassiosira
pseudonana CCMP1335]
Length = 501
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 242/492 (49%), Positives = 322/492 (65%), Gaps = 29/492 (5%)
Query: 184 EGVEEKPEEAAALKLKEEAADLYDTFDMRVDRH-WSEKKLEEMTERDWRIFREDFNISYK 242
E E P+E A L + L ++ D+ +R + K LE+MT RDWRIFRE+++I K
Sbjct: 14 EAPEISPQEVAQLHQVQTMVQL-NSSDIDWEREELANKPLEKMTARDWRIFRENYDIVVK 72
Query: 243 GSKIPRPMRNWAEGKLT-----PELLRAVER-VGYKNPSPIQMAAIPLGLQQRDVIGIAE 296
G K P P+R++ E L P+LL A+E + Y PSPIQ AIP+G+Q+RD+IGIAE
Sbjct: 73 GGKSPPPLRSFRETPLGVPSIHPKLLDAIENTLKYTKPSPIQRQAIPIGMQRRDLIGIAE 132
Query: 297 TGSGKTAAFVLPMLTYISRLP-PISEENEAEGPYAVVMAPTRELAQQIEEETVKF-AHYL 354
TGSGKTAAF +P+ +I P I + EGP A+VMAPTRELA QI+ E K +
Sbjct: 133 TGSGKTAAFGIPLCHHILSFPQSILDTVAEEGPLALVMAPTRELALQIDIEIRKLLSSQQ 192
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
+ +++VGGQSI EQ ++R G VV+ TPGR+ DC+E Y VLNQC+Y+VLDEADRMI
Sbjct: 193 NVVSLAVVGGQSITEQATKLRNGVHVVVGTPGRINDCVEMAYLVLNQCSYIVLDEADRMI 252
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR-----------IYRTTYMFSATMPPAV 463
D+GF PQ+ +LDAM LK ENE E +++R +R T MFSATMP V
Sbjct: 253 DLGFAPQIEQILDAM-GGKLKSENETEAYEQERKDLEILGKAVPSHRLTAMFSATMPSEV 311
Query: 464 ERLARKYLRNPVVVTIG--TAGKATELISQHVVMMKES-EKFSRLQRLL-DELGDKTAIV 519
ER+A++YLR+PV+V IG +GK I+Q V+ + S +K S L+ +L D+ IV
Sbjct: 312 ERIAKRYLRHPVIVQIGDQDSGKNAR-ITQRVLYLSSSKQKESTLRDILRRSRSDEKIIV 370
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FVN KK+AD V + ++ G R LHGGK+QEQRE +L FR + VLVATDVAGRG+D
Sbjct: 371 FVNEKKHADGVGRMVENAGRRCVVLHGGKTQEQREENLGLFR-RGGVVLVATDVAGRGLD 429
Query: 580 IPDVAHVINYDMPG-NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
IPDV VIN+D+P +I+ Y HRIGRTGRAGK G+AT+F+T D + LK L +NS
Sbjct: 430 IPDVHQVINFDLPTRSIDNYCHRIGRTGRAGKEGLATSFITDEDEGIMAQLKTYLESTNS 489
Query: 639 PVPPELAKHEAS 650
+P +LA+H A+
Sbjct: 490 DIPDKLARHPAA 501
>gi|350596902|ref|XP_003126138.3| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial [Sus
scrofa]
Length = 771
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/466 (48%), Positives = 315/466 (67%), Gaps = 34/466 (7%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRPVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPP 461
+L+ MP SN KP+ ++ E EK + YR +F + PP
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQVRLFCLSTPP 611
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 75/98 (76%)
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
Y TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE Y
Sbjct: 671 YNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDY 730
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S
Sbjct: 731 IHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 768
>gi|67469545|ref|XP_650751.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467402|gb|EAL45363.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704620|gb|EMD44830.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba
histolytica KU27]
Length = 585
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/559 (39%), Positives = 337/559 (60%), Gaps = 44/559 (7%)
Query: 97 ELELIKEQYLGSKKPKKRVIKPSEKFRFS-----FDWENTEDTSRDMNALYQNPHEAQLL 151
ELE IKE Y G+ K +IKPSEKF+ + EDT+ D N LY NP + Q L
Sbjct: 49 ELEQIKEHYRGNNKESNTIIKPSEKFKVMKINDLLMTKEEEDTTTDPNDLYNNPIDFQPL 108
Query: 152 FGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDM 211
GRG G+DR N ++ +E K E+ + +T +
Sbjct: 109 LGRGNCGGLDR-------VVNPNKINQE-------------------KGESYNGLNTIN- 141
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
K L +M E DWRI RE+ NI +++ +P+R W + + +LL ++ + Y
Sbjct: 142 ----KIKTKPLNQMNENDWRIIRENLNIFVNNNEVIKPLRKWDDMNVCDDLLLLIKNI-Y 196
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
+NP+PIQ A+IP+ L+ RD+I +AETG+GKT A+++P++ ++ +LP ++EE A GPYA+
Sbjct: 197 ENPTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYAL 256
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
V+APTRELA QI++ET+K A G++V +GG+ ++ Q + G E+V+A PGRL D
Sbjct: 257 VLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDL 316
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI--- 448
L + Y VL QC +VVLDEAD+MID+G + QV + +PS E ++++
Sbjct: 317 LNQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSELPSVKDGSTEEIISMEKENASGN 376
Query: 449 --YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
RTT M+SATMP +E++ +YLR P+ ++IG G E + Q+++ ++++ K +L
Sbjct: 377 PSTRTTLMYSATMPSTLEKITNEYLRRPITISIGKTGNVAENVKQNILWVEDNMKKRKLI 436
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
+++ T IVFVN +K + + L+K +HGGK Q +R +L+GF+ K+Y+
Sbjct: 437 QVIKSSSPPT-IVFVNQQKTVEEICLLLEKEKINCIGIHGGKRQIERTDALDGFKRKKYS 495
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD-TDV 625
V+VAT++ RGIDI VA+VINY+MP IE YTHR+GRTGRAGK G A TF+ +D +V
Sbjct: 496 VMVATNILSRGIDIESVANVINYEMPQKIEEYTHRVGRTGRAGKGGNAITFINENDGKEV 555
Query: 626 FYDLKQMLIQSNSPVPPEL 644
L+Q+L+QS + +P EL
Sbjct: 556 LNQLRQILVQSRNSIPKEL 574
>gi|119578417|gb|EAW58013.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_d [Homo
sapiens]
Length = 618
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/442 (49%), Positives = 307/442 (69%), Gaps = 25/442 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEK 446
+L+ MP SN KP+ ++ E EK
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEK 587
>gi|254569806|ref|XP_002492013.1| RNA helicase in the DEAD-box family, involved in RNA isomerization
at the 5' splice site [Komagataella pastoris GS115]
gi|238031810|emb|CAY69733.1| RNA helicase in the DEAD-box family, involved in RNA isomerization
at the 5' splice site [Komagataella pastoris GS115]
gi|328351494|emb|CCA37893.1| ATP-dependent RNA helicase DDX23/PRP28 [Komagataella pastoris CBS
7435]
Length = 555
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/450 (43%), Positives = 289/450 (64%), Gaps = 20/450 (4%)
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
D D ++ D HW K + EMT RDWRI +EDFNIS KG IP P+R W E + E+L
Sbjct: 109 DGVDQRNIEKDTHWRRKSISEMTLRDWRILKEDFNISSKGGDIPNPLRFWGESNIKKEIL 168
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 323
V +G+ P+PIQ A+IPL L RD+IGIA+TGSGKT A+++P L Y+ +LP + E+
Sbjct: 169 DIVHSLGFDEPTPIQRASIPLALASRDLIGIAKTGSGKTLAYIIPALNYLLQLPHL--ES 226
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+ P +++ PTRELA Q+E+E KF L + ++S++GG SIEE I +GCE+V+A
Sbjct: 227 GDQIPQVLILVPTRELALQVEKEFKKFTVKLDLNIISLIGGHSIEENVNSISRGCEIVVA 286
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRL+DC ER+ L +C YVVLDEADRMIDMGFE QV+ +L +P+
Sbjct: 287 TPGRLLDCYERKMISLAECYYVVLDEADRMIDMGFEVQVLKILKLLPT------------ 334
Query: 444 DEKRIY---RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKES 499
D+ R R T+MF+ATM A++++ + YL P +T+G G + ++Q V E+
Sbjct: 335 DQNRFTSRPRNTFMFTATMSTAIQKITKNYLNQPGTLTVGELGTVVDTVTQEVRYFPNEN 394
Query: 500 EKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLE 558
K + L +L I+FVN KK + + L K T +HG K+Q+QRE++++
Sbjct: 395 AKLNHLFSILPSF-RPPIIIFVNYKKTCEFLQNQLSKNTALSSTVIHGSKNQDQRELAIQ 453
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
R+ + +VL+ATD+AGRGIDIP+V+ V+N+ M ++ YTHRIGRTGRAG G + T+L
Sbjct: 454 NLRSGKIDVLIATDLAGRGIDIPNVSLVVNFQMANGLDSYTHRIGRTGRAGNRGYSITYL 513
Query: 619 TFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
D+++F + +++L++S S +P EL +H+
Sbjct: 514 GPEDSEIFSEFRKLLVKSGSKIPAELRQHD 543
>gi|158297447|ref|XP_317676.4| AGAP007825-PA [Anopheles gambiae str. PEST]
gi|157015199|gb|EAA12654.5| AGAP007825-PA [Anopheles gambiae str. PEST]
Length = 670
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/572 (43%), Positives = 334/572 (58%), Gaps = 82/572 (14%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQ---------QQLLSQPQTHGRNSSDSRD 64
KP+F+TK QR AL+RRQE++A K LL++ + + D R+
Sbjct: 155 KPVFITKEQRAAEALKRRQEEVAAMKAAAAANVPKFGDVPVTTLLNREKRDPLDKYDRRE 214
Query: 65 RERERHRREREEEAKARERARLEKLAE-----RERERELELIKEQYLGSKKPKKRVIKPS 119
RER+ ER+++ +R E +++E+E E I+E+YLG K K+RV + +
Sbjct: 215 RERKAINDERDKDKDTDKRRSGAAGTEPEPVVKDKEKEQEAIRERYLGIVKKKRRVRRLN 274
Query: 120 EKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREE 179
++ +F FDW+ EDTS D N LY+ H Q +GRG AG+D +EQK+ +K ++ E+
Sbjct: 275 DR-KFVFDWDAGEDTSIDYNNLYKERHHVQF-YGRGHVAGIDIKEQKRKQSKFYGDLLEK 332
Query: 180 IRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 239
R+ E +E+ + K+E +D DRHWSEK+++EMTERDWRIFRED+NI
Sbjct: 333 -RRTEAEKEQEKVRLKKVKKKEDKQKWD------DRHWSEKEVDEMTERDWRIFREDYNI 385
Query: 240 SYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGS 299
+ KG KIP P+R+W E E+L +++VGYK+P+PIQ AIP+GLQ RD+IGIAETGS
Sbjct: 386 TIKGGKIPNPIRSWLESGFPKEILEIIDKVGYKDPTPIQRQAIPIGLQNRDIIGIAETGS 445
Query: 300 GKTAAFVLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
GKT AF++P+LT+I LP I E +GPYA+++APTRELAQQIEEET KF LGI+
Sbjct: 446 GKTLAFLIPLLTWIQSLPKIDRLETADQGPYAIILAPTRELAQQIEEETQKFGTPLGIRT 505
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
V +VGG S EEQGFR+R
Sbjct: 506 VVVVGGLSREEQGFRLR------------------------------------------- 522
Query: 419 EPQVVGVLDAMPSSNLKPENED--------EELDEKRIYRTTYMFSATMPPAVERLARKY 470
L MP SNLKP+ E+ E + K+ YR T MF+ATMPPAVERLAR Y
Sbjct: 523 -------LAYMPVSNLKPDTEEAEDASKLMENFNTKKKYRQTVMFTATMPPAVERLARTY 575
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMV 530
LR P V IG+ GK TE Q + +M E++K +L +L + I+FVN KK AD++
Sbjct: 576 LRRPATVYIGSIGKPTERTEQIIHIMGENDKRKKLMEILSRGVEPPCIIFVNQKKGADVL 635
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
AK L+KLGY TLHGGK QEQRE +L +
Sbjct: 636 AKGLEKLGYNACTLHGGKGQEQREYALASLKN 667
>gi|401398216|ref|XP_003880249.1| dead-box helicase family protein, related [Neospora caninum
Liverpool]
gi|325114658|emb|CBZ50214.1| dead-box helicase family protein, related [Neospora caninum
Liverpool]
Length = 856
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/511 (46%), Positives = 309/511 (60%), Gaps = 72/511 (14%)
Query: 16 LFLTKAQREQ--LALERRQEQIAQQKRRQ------------------------------- 42
+F+TK QREQ A ERRQ ++ ++K RQ
Sbjct: 350 MFMTKKQREQQKAADERRQLEMEKKKERQLLQNRKNFLMQQEIEKEREVKEKLKQREMEK 409
Query: 43 --EQQQQLLSQPQTHGRNSSDSRDRERERHRREREEEAKARERARLEKLAE--------- 91
E+Q++ L + S + + ERE R+ E++ + R LA+
Sbjct: 410 IKEEQERRLRAVRGSSGTSRNKAEEEREAKRQAEEKKGGSSGRRGESSLADLRLLNLPEQ 469
Query: 92 ----RERERELELIKEQYLGSKKPKKRVIKPSEKFR--FSFDWENTEDTSR-DMNALYQN 144
R++ERELE I+ YLG + KK++ KPSEKFR F+F+W + EDT + D N LYQ
Sbjct: 470 ELRARQQERELEQIRNHYLGMRTEKKKIQKPSEKFRNIFNFEWNDAEDTCKGDNNPLYQE 529
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
E QLLFGRG R+E +K + + +A+ ++ KE A D
Sbjct: 530 RMEPQLLFGRG------RQEHQKAEESRGAAEAAAAATEAVRAARDAQASRVREKENAED 583
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
HW+ KK EEM ERDWRIFREDF I KG ++P P+R WAE L EL+
Sbjct: 584 NRG--------HWTTKKREEMNERDWRIFREDFEIYIKGGRVPPPIRTWAESALPWELIE 635
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
AV+ Y+ P+PIQM AIP+ L+QRD+IGIAETGSGKTAAFVLPMLTY+ LPP++EE
Sbjct: 636 AVKHANYERPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVKGLPPLNEETG 695
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GPYA+++AP+RELA QI+EET KFA + + V++VGG+S E Q F++R+G E+VI T
Sbjct: 696 QDGPYALILAPSRELAIQIDEETQKFASFCKCQTVAVVGGRSAETQAFQLRRGAEIVIGT 755
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE----D 440
PGR+ DCLE+ Y VLNQCNYVVLDEADRMIDMGFE V +LD +P+SNLK +E
Sbjct: 756 PGRVKDCLEKAYTVLNQCNYVVLDEADRMIDMGFEEIVNFILDQIPTSNLKSNDEALILQ 815
Query: 441 EELDEK---RIYRTTYMFSATMPPAVERLAR 468
+E+ K R+YR T MFSATMPPAVERLAR
Sbjct: 816 QEMQAKAGHRLYRLTQMFSATMPPAVERLAR 846
>gi|406601713|emb|CCH46674.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 588
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/653 (35%), Positives = 365/653 (55%), Gaps = 119/653 (18%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRER 74
P FL+K +R+Q+ALE+RQ ++ Q Q S+P ++ ++S+S D ++
Sbjct: 25 PKFLSKKERQQIALEKRQNKV--------DQLQQTSRPSSNSNSNSNSHDIRKD------ 70
Query: 75 EEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDT 134
E + ++ELE K S + +F FDW+ EDT
Sbjct: 71 -----TNNNNNFEDEFSKNYQKELERAK----------------SSRKKFKFDWKEDEDT 109
Query: 135 SRDMNAL---YQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
+ N+L Y NP I K+ KP+
Sbjct: 110 FNNENSLISMYSNPI---------------------------------ITKR-----KPD 131
Query: 192 EAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
+ + +++ +D D HW+ K LE+M RDWRI +ED+ I KGS +P P+R
Sbjct: 132 DLELISTRKKTKQNWD------DIHWTAKPLEQMKSRDWRILKEDYEIIIKGSNLPNPLR 185
Query: 252 NWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLT 311
NW E K+ ELL + ++GYK P+PIQ A+IP+ L ++D+IGIAETGSGKT A+++PML+
Sbjct: 186 NWRESKIPLELLDIIHKLGYKEPTPIQRASIPISLSKKDIIGIAETGSGKTLAYLIPMLS 245
Query: 312 YISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL-GIKVVSIVGGQSIEEQ 370
+ +LP ++E ++A+GPY +++ PTRELAQQIE E KF+ +L I ++S+VGG+ IE+
Sbjct: 246 KLLKLPRLNEFSKADGPYGLILVPTRELAQQIEIEFKKFSKFLPSIDIISLVGGKLIEKN 305
Query: 371 GFRIR-QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
++ + E++IATPGRLIDCLER VLNQ ++VLDE+D+MI+M F QV + + M
Sbjct: 306 ILDLQNKTIEIIIATPGRLIDCLERHILVLNQIQFLVLDESDKMIEMNFGDQVAKITEFM 365
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
NLK R MF+ATM VE+L++ Y+ +P ++ IG +I
Sbjct: 366 ---NLK--------------RQNMMFTATMTLEVEKLSKNYVNDPAIINIGNVNSNEMII 408
Query: 490 SQHV------------VMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNADMVAKNL 534
+ + + +S+K S+L ++L G+K I+F+N K+ D + K L
Sbjct: 409 NDRIEQKFEFFNNSNNINEIDSKKISKLIKILS--GNKYKSPIIIFINYKETGDFIFKKL 466
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G++V+ +HG K+QEQRE +++ + + ++L+ T+VA RGIDIP+V+ V+N+ M
Sbjct: 467 SDQGFKVSIIHGSKNQEQREFAIKQLKDGKVDILIGTNVASRGIDIPNVSLVLNFQMTKK 526
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTF-HDTDVFYDLKQMLIQSNSPVPPELAK 646
I+ Y HR+GRTGRAG G + TFL D +++ DLK++LI+S + +P E K
Sbjct: 527 IDDYIHRVGRTGRAGSYGTSITFLNDESDFEIYNDLKKILIKSGNKIPDEFKK 579
>gi|154273623|ref|XP_001537663.1| hypothetical protein HCAG_07085 [Ajellomyces capsulatus NAm1]
gi|150415271|gb|EDN10624.1| hypothetical protein HCAG_07085 [Ajellomyces capsulatus NAm1]
Length = 635
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/530 (46%), Positives = 321/530 (60%), Gaps = 59/530 (11%)
Query: 3 RLVDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQ-PQTHGRNSSD 61
R DE S KP FLT+A+RE+LALE+R +++ +KR Q + + +T+G NSS
Sbjct: 119 READEAAS---KPKFLTRAEREKLALEKRAKEVENKKRLQTNGARPSPRNSETNGYNSSA 175
Query: 62 SRDRERERHRRE---------REEE---AKARERARLEKL---------AERERER---- 96
SR + R R E A A R + + AE++ E+
Sbjct: 176 SRSDGIDGSSRAPIPTGPRGMRHGEIPTAPAAMRTKQNDMPPPPSPGQKAEQKGEKRPSP 235
Query: 97 ---ELELIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEA 148
+ LI+++Y+GS + KK+ + +E+ +F+F+W EDTS D N LYQN A
Sbjct: 236 EEAQAALIRQRYMGSDQTSNFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSIA 294
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAAL--KLKEEAADLY 206
FGRG AG E +N E+ R E + E + + KEE
Sbjct: 295 NF-FGRGRLAGFSD-EFADAVTRNYARALED-RDPEAGRARAREILEMERRRKEEGGR-- 349
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+D HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+WAE L LL V
Sbjct: 350 ----HALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSWAESGLPKRLLSIV 405
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENE 324
E+VGY +PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E
Sbjct: 406 EQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRR 465
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GPYA+++APTRELAQQIE E KF+ LG VVSIVGG S+EEQ + +R G E++IAT
Sbjct: 466 NDGPYAIILAPTRELAQQIEIEAKKFSVPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIAT 525
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE-- 442
PGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ED E
Sbjct: 526 PGRLVDCIERRMIVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNQKPDTEDAENA 585
Query: 443 ------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
+ K YR T M++ATMP AVER+ARKYLR P +VTIG G+A
Sbjct: 586 QAMSRHIGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAV 635
>gi|226482476|emb|CAX73837.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Schistosoma japonicum]
Length = 348
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 244/346 (70%), Gaps = 9/346 (2%)
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
MAPTRELAQQIEEETVKF LGIK VS++GG S E++ ++R G E+VI TPGRL D L
Sbjct: 1 MAPTRELAQQIEEETVKFGRPLGIKTVSLIGGLSREDRALKLRMGAEIVIGTPGRLNDVL 60
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---- 448
E RY VLNQC Y+VLDEAD+MIDMGFEP+V +L +P +N KP+NED E D K +
Sbjct: 61 ENRYMVLNQCTYIVLDEADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLSNFA 120
Query: 449 ----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
YR T MF+ATMPPAVERLAR YLR P +V IG+AGK TE + Q V M+ E EK +
Sbjct: 121 TKHKYRQTVMFTATMPPAVERLARSYLRRPAMVYIGSAGKPTERVEQIVYMVSEQEKRRK 180
Query: 505 LQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L +L D I+FVN KK AD++AK L+KLGY LHGGK QEQRE +L ++ +
Sbjct: 181 LLEILAAGLDPPVIIFVNQKKGADVLAKGLEKLGYSAVVLHGGKGQEQREYALASLKSGQ 240
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+LVATDVAGRGIDI DV+ VINYDM I+ Y HRIGRTGRAGK+G+A + LT D
Sbjct: 241 KEILVATDVAGRGIDIKDVSMVINYDMSKTIDEYVHRIGRTGRAGKSGIAISLLTKEDAP 300
Query: 625 VFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
VFYDLKQ+LIQS S P ELA H ++ KPG + + R +TV+
Sbjct: 301 VFYDLKQLLIQSPVSTCPHELANHPDAQTKPGILAAKKRRAEETVY 346
>gi|260945072|ref|XP_002616834.1| hypothetical protein CLUG_04075 [Clavispora lusitaniae ATCC 42720]
gi|238850483|gb|EEQ39947.1| hypothetical protein CLUG_04075 [Clavispora lusitaniae ATCC 42720]
Length = 559
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/459 (44%), Positives = 292/459 (63%), Gaps = 26/459 (5%)
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV--E 267
D + HWSEK LE MT RDWRIF++DFNIS KG+ I P+R+W E P + V +
Sbjct: 103 DQKNPAHWSEKSLEHMTPRDWRIFKDDFNISAKGNNIHNPLRSWDEEPQLPTSIVEVITQ 162
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP------ISE 321
++ Y P+P+Q AAIP+ L+ RDV+GIAETGSGKT AF+LP++TYI + P S+
Sbjct: 163 KLKYTEPTPVQRAAIPVALRHRDVVGIAETGSGKTLAFLLPLITYIQSIEPEYMKYEHSK 222
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
E+ A +V+APTRELA QI +E K A LG+ VV+I+GG EE +R G +V
Sbjct: 223 EDNANRALGLVLAPTRELALQITKEAEKVAGPLGLSVVTIIGGHQYEETVHSLRNGVHIV 282
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
+ATPGRL+D LER L +C ++ +DEAD+MIDMGFE + +LD +PSS E+ +
Sbjct: 283 VATPGRLVDSLERGIVSLEKCYHLTMDEADKMIDMGFEKSLQAILDYLPSS----ESLQK 338
Query: 442 ELDEKRIY----RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
+D RI+ RTT MF+AT+ PA+E++ ++YL +P + +G A + E ISQ M
Sbjct: 339 SIDS-RIFRVSKRTTLMFTATITPAIEKITKQYLIDPAFLYVGGANEVVENISQQFEYMG 397
Query: 498 E-------SEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGY-RVTTLHGGK 548
E ++F+ L R+L G D + I+F N K+ + +A+ L+ G+ +V +HG K
Sbjct: 398 EETVQDFDEKRFASLVRILKAQGHDMSVIIFANFKRTVEQLAEELEGKGFPKVAVVHGSK 457
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+QE RE ++E FR KR N+L+ATDVA RG+D+P V+ V+NY M E Y HRIGRTGRA
Sbjct: 458 TQEAREKAIESFRAKRANILIATDVAARGLDVPHVSLVVNYHMSKKFEEYIHRIGRTGRA 517
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
G+ G + TF+ D D F +LK+ L + +P L ++
Sbjct: 518 GQKGASYTFVDGGDKDTFPELKKFLSRGGYRIPEWLKRN 556
>gi|363746013|ref|XP_003643496.1| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial
[Gallus gallus]
Length = 394
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/374 (52%), Positives = 274/374 (73%), Gaps = 18/374 (4%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+W+ +EDTS
Sbjct: 22 EDEEGRQKIREEK----DKSKELHAIKERYLGGVKKRRRTRHLNDR-KFVFEWDASEDTS 76
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +EEK +E A
Sbjct: 77 IDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLEEKEQEEAR 132
Query: 196 LK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG KIP P+R+W
Sbjct: 133 LRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSW 186
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
+ L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I
Sbjct: 187 KDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI 246
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG S E+QGF
Sbjct: 247 TTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 306
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V +L+ MP +
Sbjct: 307 RLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVT 366
Query: 433 NLKPENEDEELDEK 446
N KP+ ++ E EK
Sbjct: 367 NQKPDTDEAEDPEK 380
>gi|407036014|gb|EKE37960.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 509
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/519 (39%), Positives = 316/519 (60%), Gaps = 39/519 (7%)
Query: 132 EDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
EDT+ D N LY NP + Q L GRG G+DR N ++ +E
Sbjct: 13 EDTTTDPNDLYNNPIDFQPLLGRGNCGGLDR-------VVNPNKINQE------------ 53
Query: 192 EAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
K E+ + +T + K L +M E DWRI RE+ NI +++ +P+R
Sbjct: 54 -------KGESHNGLNTIN-----KIKTKPLNQMNENDWRIIRENLNIFVNNNEVIKPLR 101
Query: 252 NWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLT 311
W + + +LL ++ Y+NP+PIQ A+IP+ L+ RD+I +AETG+GKT A+++P++
Sbjct: 102 KWDDMNVCDDLLLLIKNT-YENPTPIQCASIPIALKMRDLIALAETGTGKTFAYLIPLIQ 160
Query: 312 YISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQG 371
++ +LP ++EE A GPYA+V+APTRELA QI++ET+K A G++V +GG+ ++ Q
Sbjct: 161 FVLKLPKLTEETSASGPYALVLAPTRELALQIQKETLKLATPFGLRVCCCIGGEPMQPQI 220
Query: 372 FRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS 431
+ G E+V+A PGRL D L + Y VL QC +VVLDEAD+MID+G + QV + +PS
Sbjct: 221 EELSNGAEIVVAAPGRLKDLLNQSYLVLGQCYFVVLDEADKMIDLGLDVQVRYIFSELPS 280
Query: 432 SNLKPENEDEELDEKRI-----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT 486
E ++++ RTT M+SATMP +E++ +YLR P+ ++IG G
Sbjct: 281 VKDGSTEEIISMEKENASGNPSTRTTLMYSATMPSTLEKITNEYLRRPITISIGKTGNVA 340
Query: 487 ELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
E + Q+V+ ++++ K +L +++ T IVFVN +K + + L+K +HG
Sbjct: 341 ENVKQNVIWVEDNMKKRKLIQVIKSSSPPT-IVFVNQQKTVEEICLLLEKEKINCVGIHG 399
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
GK Q +R +L+GF+ K+Y+V+VAT++ RGIDI VA+VINY+MP IE YTHR+GRTG
Sbjct: 400 GKRQIERTDALDGFKRKKYSVMVATNILSRGIDIESVANVINYEMPQKIEEYTHRVGRTG 459
Query: 607 RAGKTGVATTFLTFHD-TDVFYDLKQMLIQSNSPVPPEL 644
RAGK G A TF+ +D +V L+Q+L+QS + +P EL
Sbjct: 460 RAGKGGNAITFINENDGKEVLNQLRQILVQSRNSIPKEL 498
>gi|148672231|gb|EDL04178.1| mCG18410, isoform CRA_c [Mus musculus]
Length = 466
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/376 (52%), Positives = 275/376 (73%), Gaps = 18/376 (4%)
Query: 76 EEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTS 135
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+W+ +EDTS
Sbjct: 61 EDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFEWDASEDTS 115
Query: 136 RDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAA 195
D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +EEK +E A
Sbjct: 116 IDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLEEKEQEEAR 171
Query: 196 LK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNW 253
L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG KIP P+R+W
Sbjct: 172 LRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSW 225
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
+ L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF++P+L +I
Sbjct: 226 KDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI 285
Query: 314 SRLPPISEENEAE-GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
+ LP I E++ GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG S E+QGF
Sbjct: 286 TTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGF 345
Query: 373 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
R+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V +L+ MP S
Sbjct: 346 RLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVS 405
Query: 433 NLKPENEDEELDEKRI 448
N KP+ ++ E EK +
Sbjct: 406 NQKPDTDEAEDPEKML 421
>gi|150863785|ref|XP_001382380.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
gi|158514818|sp|A3LNL1.2|PRP28_PICST RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|149385041|gb|ABN64351.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
Length = 482
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/466 (43%), Positives = 287/466 (61%), Gaps = 22/466 (4%)
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA- 265
D D HWSEK L++MT RDWRIFRED+ I+ KG I P+R W E + +LL
Sbjct: 12 DNIDFVETTHWSEKSLDQMTARDWRIFREDYGITSKGGDIDNPLRTWNEASIPSKLLSII 71
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
V+++ Y P+PIQ AAIPL L QRDV+GIAETGSGKT AF++P+L+YI E E
Sbjct: 72 VDKLEYLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYEH 131
Query: 326 E------GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
+ P +++APTRELAQQI +E KF LG+ VVSI+GG EE IR G
Sbjct: 132 QQEQNYNKPLGLILAPTRELAQQITKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGVH 191
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
VV+ATPGRL+D LER L++C Y+++DEADRMIDMGFE + +L +PS++
Sbjct: 192 VVVATPGRLVDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNSTI 251
Query: 440 DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-- 497
D + + R T MF+AT+ P +E++ + +L P + IG AG+A + I Q+ +
Sbjct: 252 DSMIFHIK-KRITLMFTATISPPIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSA 310
Query: 498 -------ESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYR-VTTLH 545
+S++F +L R++ + + + I+F N K+ D+++ L+K G+R +H
Sbjct: 311 TGGSEDFDSKRFDKLVRIIQQHSRESRQFSIIIFANYKRVCDLLSLELEKNGFRDNVVIH 370
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
G K+QE RE ++ FR+ +L+ATDVA RGID+P+V+ V+N+ M + Y HRIGRT
Sbjct: 371 GSKTQELREKAISSFRSHESRILIATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRT 430
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
GRAG G + TF+ D+DVF DLK+ L+ P L KH +++
Sbjct: 431 GRAGNRGESYTFIDDSDSDVFIDLKKFLVNGGKKCPDWLIKHASTQ 476
>gi|71019395|ref|XP_759928.1| hypothetical protein UM03781.1 [Ustilago maydis 521]
gi|46099583|gb|EAK84816.1| hypothetical protein UM03781.1 [Ustilago maydis 521]
Length = 568
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/335 (55%), Positives = 240/335 (71%), Gaps = 6/335 (1%)
Query: 206 YDTFDMRVD-RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
YD+ D R D +HWSEK L +M +RDWRIFREDF IS +G IP+P+R+W E + +L
Sbjct: 221 YDSLDKRFDDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRESGIPASILS 280
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+E VGYK PSPIQ AIP+GLQ RD+IGIAETGSGKTA+F++P+L YIS+LP + E +
Sbjct: 281 TIEEVGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTK 340
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
A GP A+++ PTRELAQQIE ET KFA LG++ VSIVGG+ + +Q + +R G E+VIAT
Sbjct: 341 ALGPQALILVPTRELAQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIAT 400
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN---EDE 441
PGRL DC+ER VL+QC YVV+DEAD+M+DMGFEPQV +LD++P SNLKP+N E
Sbjct: 401 PGRLKDCIERHVLVLSQCTYVVMDEADKMVDMGFEPQVNFILDSLPVSNLKPDNAIPEGS 460
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM-KESE 500
D YR T ++SATMPP+VER+AR YLR P +TIG AG+A + Q V + E +
Sbjct: 461 ADDMVGKYRVTMLYSATMPPSVERMARVYLRRPATITIGDAGQAVATVEQIVEFIPTEDQ 520
Query: 501 KFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNL 534
+ +RL +L + IVFVN KK AD ++ L
Sbjct: 521 RRTRLISILQQSSHLVPIIVFVNQKKAADQLSSYL 555
>gi|223590136|sp|A5DF03.2|PRP28_PICGU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|190345810|gb|EDK37756.2| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/455 (42%), Positives = 283/455 (62%), Gaps = 23/455 (5%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWS+KKLE+MT RDWRIF+EDF+I+ KG+ IP P+R+W E + LL ++++GYK P+
Sbjct: 115 HWSDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSWKESGIPTTLLNTIDQLGYKEPT 174
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP------ISEENEAEGPY 329
PIQ AAIP L RDV+GIAETGSGKT AF++P+L+Y+S + +E+
Sbjct: 175 PIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEHKQESNLNKVL 234
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
+V+APTRELA QI +E KFA LG VV+I+GG EE ++ G +V+ATPGRLI
Sbjct: 235 GLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGRLI 294
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
D E+ L+QC ++ +DEADRMIDMGFE + +L +PS++ D + + +
Sbjct: 295 DSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTSSSGFGLDSTIFKVK-S 353
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM------------- 496
R T MF+AT+ P +E++ + YL+ P + IG AG+ + I+Q +
Sbjct: 354 RITLMFTATISPPIEKITKDYLQTPAYLYIGDAGEIVDNINQKFEYLGDNVDSQEELNAP 413
Query: 497 KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD--KLGYRVTTLHGGKSQEQRE 554
+ ++ S L++ + E I+F N K+ ++++ L +G + +HG KSQE RE
Sbjct: 414 RTNKMISALRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVGSNI-VIHGSKSQEARE 472
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ FR + NVL+ATDVA RGIDIP+V+ V+NY MP + Y HRIGRTGRAGK+G +
Sbjct: 473 SAIASFREHKVNVLIATDVAARGIDIPNVSLVVNYHMPKRFDEYIHRIGRTGRAGKSGAS 532
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
+F+ D+++ +LK L + +P L +H A
Sbjct: 533 LSFVDDGDSEILVNLKSFLSKGTKRLPDWLLRHPA 567
>gi|219120540|ref|XP_002181006.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407722|gb|EEC47658.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 462
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/459 (50%), Positives = 306/459 (66%), Gaps = 35/459 (7%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPEL-------LRAVERV-GY 271
K L +MT RDWRI RE++ I KG K P P+R++ E TP+L L A+E+V +
Sbjct: 1 KPLAKMTARDWRILRENYEIIVKGGKAPPPLRSFREAP-TPDLPVLHTALLEAIEQVLRF 59
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE-GPYA 330
K PSPIQ AIP+GLQ+RD+IGIAETGSGKT AF +P+ Y+ LP E+ A+ GP A
Sbjct: 60 KEPSPIQRQAIPIGLQRRDLIGIAETGSGKTVAFGVPLCHYLLNLPSRVLESVADAGPLA 119
Query: 331 VVMAPTRELAQQIEEETVKF-AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
+VMAPTRELA QI+ E K + I+ V IVGGQ I++Q +R+G +V+ TPGR+
Sbjct: 120 LVMAPTRELALQIDGEFQKLLSRQRLIRTVGIVGGQQIQQQAQELRRGVHIVVGTPGRIN 179
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR-- 447
+C++ Y VLNQC Y+VLDEADRMIDMGF PQ+ +LDA S LK ENE E +++
Sbjct: 180 ECIDMAYMVLNQCCYIVLDEADRMIDMGFAPQIETILDACGGS-LKSENEAETYQQEKED 238
Query: 448 -------IYRTTYMFSATMPPAVERLARKYLRNPVVVTIG--TAGKATELISQHVVMMKE 498
+R T MFSATMPP VER+A++YLR+P +V++G +GK I Q ++ +
Sbjct: 239 LQKADVARHRLTAMFSATMPPEVERIAKRYLRHPAIVSVGDKDSGKNAR-IEQRIMFLAS 297
Query: 499 SEKFSRLQRLLDELGDK-----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
+ ++ R ++L D+ IVFVN KK+A+ V + +++ G LHGGK+QEQR
Sbjct: 298 VSQKEKVLR--EQLQDRRFLREKIIVFVNEKKHAEGVGRMVERSGRACVVLHGGKTQEQR 355
Query: 554 EISLEGFRTKRYN-VLVATDVAGRGIDIPDVAHVINYDMPG-NIEMYTHRIGRTGRAGKT 611
E +LE FR R N VLVATDVAGRG+DIPDVAHVINYD+P +IE YTHRIGRTGRAGK
Sbjct: 356 EENLETFR--RGNVVLVATDVAGRGLDIPDVAHVINYDLPTRSIENYTHRIGRTGRAGKE 413
Query: 612 GVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEAS 650
GVAT+F+T D + LK L + + VP LA+H A+
Sbjct: 414 GVATSFITDEDEGIMAPLKAYLESTGNRVPERLARHPAA 452
>gi|47195341|emb|CAF87227.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 239/334 (71%), Gaps = 11/334 (3%)
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
T+KF LGI+ V+++GG S E+QGFR+R GCE+VIATPGRLID L+ RY VL++C YVV
Sbjct: 1 TIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLDNRYLVLSRCTYVV 60
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSA 457
LDEADRMIDMGFEP V +L+ +P +N KP+ E+ E +K + YR T MF+A
Sbjct: 61 LDEADRMIDMGFEPDVQKILEFIPVTNQKPDTEEAEDPDKMMMNFESGKNKYRQTVMFTA 120
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
TMPPAVERLAR YLR P VV IG+AGK E + Q V++M E EK +L +L +
Sbjct: 121 TMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVLLMSEGEKRKKLLEVLSNGFEPPI 180
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
I+FVN KK D++AK+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRG
Sbjct: 181 IIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRG 240
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
IDI DV+ VINYDM NIE Y HRIGRTGRAGK+GVA TFLT D+ VFYDLKQ +++S
Sbjct: 241 IDIQDVSMVINYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSAVFYDLKQAILESP 300
Query: 638 -SPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
S PPEL H ++ KPGTI + RR +T+FA
Sbjct: 301 VSTCPPELTNHPDAQHKPGTILTK-KRREETIFA 333
>gi|146420455|ref|XP_001486183.1| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/455 (41%), Positives = 281/455 (61%), Gaps = 23/455 (5%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HW +KKLE+MT RDWRIF+EDF+I+ KG+ IP P+R+W E + LL ++++GYK P+
Sbjct: 115 HWLDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSWKESGIPTTLLNTIDQLGYKEPT 174
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP------ISEENEAEGPY 329
PIQ AAIP L RDV+GIAETGSGKT AF++P+L+Y+S + +E+
Sbjct: 175 PIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEHKQESNLNKVL 234
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
+V+APTRELA QI +E KFA LG VV+I+GG EE ++ G +V+ATPGRLI
Sbjct: 235 GLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGRLI 294
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
D E+ L+QC ++ +DEADRMIDMGFE + +L +PS++ D + + +
Sbjct: 295 DSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTSSSGFGLDSTIFKVK-S 353
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM------------- 496
R T MF+AT+ P +E++ + YL+ P + IG AG+ + I+Q +
Sbjct: 354 RITLMFTATISPPIEKITKDYLQTPAYLYIGDAGEIVDNINQKFEYLGDNVDSQEELNAP 413
Query: 497 KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD--KLGYRVTTLHGGKSQEQRE 554
+ ++ L++ + E I+F N K+ ++++ L +G + +HG KSQE RE
Sbjct: 414 RTNKMILALRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVGSNI-VIHGSKSQEARE 472
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ FR + NVL+ATDVA RGIDIP+V+ V+NY MP + Y HRIGRTGRAGK+G +
Sbjct: 473 SAIASFREHKVNVLIATDVAARGIDIPNVSLVVNYHMPKRFDEYIHRIGRTGRAGKSGAS 532
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
+F+ D+++ +LK L + +P L +H A
Sbjct: 533 LSFVDDGDSEILVNLKSFLSKGTKRLPDWLLRHPA 567
>gi|255715335|ref|XP_002553949.1| KLTH0E10890p [Lachancea thermotolerans]
gi|238935331|emb|CAR23512.1| KLTH0E10890p [Lachancea thermotolerans CBS 6340]
Length = 589
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 265/418 (63%), Gaps = 20/418 (4%)
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAVE- 267
++ + +HWS+K LEEM+ERDWRI RED++I KG I P+RNW E P E++ +E
Sbjct: 144 EIYMGKHWSQKALEEMSERDWRILREDYHIETKGGSIRHPLRNWTETNSIPTEIVGIIET 203
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
++ Y P+PIQ A IP L RD +G+A TGSGKT AF++P L ++ PP+++ + +G
Sbjct: 204 KLKYLEPTPIQRATIPNVLNGRDFVGVAATGSGKTLAFLIPPLCQLNNTPPLNDITKMDG 263
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLG--IKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
P A+++APTRELAQQIE E K +L KVVS+VGG S+EE + + GC++++ATP
Sbjct: 264 PSALILAPTRELAQQIEAEANKVVKFLHRPTKVVSLVGGHSVEEISYSLSHGCDILVATP 323
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLIDCLE VL Q ++LDEADRMID GFE Q+ +L S
Sbjct: 324 GRLIDCLESNILVLQQVRTLILDEADRMIDFGFEDQLTTILARTESVK------------ 371
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R T MF+ATM +ER+A YL P V +G+ ++ + E ++FSRL
Sbjct: 372 ---GRQTMMFTATMSSTIERIANGYLNKPAYVRVGSQDTKAQIKQVVQYLPSEEQRFSRL 428
Query: 506 QRLLDELGDKTAIVFVNTKKNAD-MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
R + ++F+N K+ AD + AK + YRVTTLHG KSQEQRE SL R+ +
Sbjct: 429 CRDVLPRFRSPIMIFINYKRTADWLAAKFSSETRYRVTTLHGSKSQEQREHSLNLLRSGK 488
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
++++ATDVAGRGIDIP+V+ V+N+ M + E Y HRIGRTGRAGK+G A TFLT D
Sbjct: 489 ADIMIATDVAGRGIDIPNVSLVVNFQMCTSFEGYIHRIGRTGRAGKSGCALTFLTERD 546
>gi|294658482|ref|XP_460822.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
gi|218511820|sp|Q6BLU9.2|PRP28_DEBHA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|202953164|emb|CAG89165.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
Length = 580
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/462 (42%), Positives = 280/462 (60%), Gaps = 28/462 (6%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA-VERVGYK 272
D HWSEK++++MT RDWRIF+ED+NI+ KG I P+R WAE KL +LL ++ +GY
Sbjct: 117 DMHWSEKQIDDMTTRDWRIFKEDYNITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYD 176
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR------LPPISEENEAE 326
+P+PIQ A+IPL L RD++GIAETGSGKT AF+LP+ +YI L +E+
Sbjct: 177 SPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFN 236
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPG 386
P +++APTRELA QI +E F L + VV+I+GG EE +R G +V+ATPG
Sbjct: 237 KPLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPG 296
Query: 387 RLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK 446
RLID LER L+ C + +DEAD+MIDMGFE + +L+ +P+S E + +D K
Sbjct: 297 RLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYLPAS----EKLETTIDGK 352
Query: 447 RIY---RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM------- 496
R T MF+AT+ P +E++ + YL P + IG G+A + I+Q
Sbjct: 353 IFNIKKRITLMFTATISPPIEKITKNYLMKPGYLFIGNVGEAVDNINQQFEYFGARQSSD 412
Query: 497 ------KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYR-VTTLHGGKS 549
K + FS L+ DE + + I+F N KK + +A L + G+ T +HG KS
Sbjct: 413 EILDPKKLDKLFSILRFHKDENRNYSIIIFANFKKACEELAYELSRKGFSDNTVIHGSKS 472
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
QE RE +++ FR + +L+ATDVA RGIDIP+V+ V+NY M + Y HRIGRTGRAG
Sbjct: 473 QEARERAIDSFREGKDKILIATDVAARGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAG 532
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
G + TF+ D++VF DLK+ L + P L KH +++
Sbjct: 533 NKGTSCTFIDDGDSEVFLDLKKFLNKGKKKCPEWLLKHSSTQ 574
>gi|363748448|ref|XP_003644442.1| hypothetical protein Ecym_1395 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888074|gb|AET37625.1| hypothetical protein Ecym_1395 [Eremothecium cymbalariae
DBVPG#7215]
Length = 565
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/416 (46%), Positives = 272/416 (65%), Gaps = 24/416 (5%)
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-E 267
D + + W+EKKL EMTERDWRI REDFNI+ KG + P+RNW+E KL P ++++ + +
Sbjct: 120 DGYMSKRWTEKKLSEMTERDWRILREDFNITAKGGGMKHPLRNWSELKLIPTDIVKVITD 179
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
+GY+ P+PIQ A IP RD +G+A TGSGKT AF++P+ ++LPP++ +G
Sbjct: 180 DLGYEEPTPIQRATIPNVQNNRDFMGVASTGSGKTLAFLIPIFMKFTKLPPLNVITRQDG 239
Query: 328 PYAVVMAPTRELAQQIEEETVKF-AHYL-GIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
P A+++APTRELAQQIE E KF AH+ V SIVGG ++EE F ++ GC +++ATP
Sbjct: 240 PQALILAPTRELAQQIEAEAKKFCAHWKRPCLVTSIVGGHTLEEIIFNLQDGCNILVATP 299
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLIDCLE VL Q +VLDEADRM+D GFE Q+ +L D+ L++
Sbjct: 300 GRLIDCLENHVLVLKQVYTLVLDEADRMVDFGFEDQLTTIL----------ARTDDILEK 349
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFS 503
+ T MF+ATM ++ER+A YLRNP VTIG +G A ++ Q ++ + + ++F
Sbjct: 350 Q-----TLMFTATMSSSIERIANGYLRNPGFVTIGGSGSAPQI--QQIIEYVATDEQRFK 402
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNL-DKLGYRVTTLHGGKSQEQREISLEGFRT 562
L + + I+F+N K AD + + ++ +RVT LHG KSQ QRE SL+ FR
Sbjct: 403 MLTQDILPNYRPPVIIFINYKVTADWLLRKFQEESKFRVTILHGSKSQTQREHSLKAFRE 462
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
+ +++VATDVAGRGIDIP+V+ V+N+ MP ++ Y HRIGRTGRA + G TFL
Sbjct: 463 GKVDIMVATDVAGRGIDIPNVSLVVNFQMPSKLDDYIHRIGRTGRANQKGTTLTFL 518
>gi|238878470|gb|EEQ42108.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 581
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/480 (42%), Positives = 297/480 (61%), Gaps = 21/480 (4%)
Query: 186 VEEKPEEAAALKLKEEAADLYD-TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
VEE+ + + L E ++ D F + HW+ KKLEEMT+RDWRIF+ED+NI+ KG
Sbjct: 102 VEEEDTASGFVPLIEMDEEIDDPLFSGQESTHWTNKKLEEMTDRDWRIFKEDYNITTKGK 161
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P+R W EG + +L+ + ++GY+ P+ +Q A+IPL L++RDV+G+AETGSGKT A
Sbjct: 162 NIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLA 221
Query: 305 FVLPMLTYISRLPP--ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIV 362
F++P+L YI + + E + P +++APTRELA QI +E KF LG +V+ I+
Sbjct: 222 FLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPII 281
Query: 363 GGQSIEEQGFRIRQ-GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
GG ++ +I Q G +++ATPGRL+D +ER+ L++C +V+DEADRMIDMGFE
Sbjct: 282 GGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKD 341
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRIY----RTTYMFSATMPPAVERLARKYLRNPVVV 477
+ VLD +P+ E + + RI+ R+T MF+AT+ P VE+L +KYL +P +
Sbjct: 342 LNKVLDKLPT-----EKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKYLIDPGYL 396
Query: 478 TIGTAGKATELISQHVVMMK----ESEKFSRLQRLLDELGDKT----AIVFVNTKKNADM 529
IG AG+A + ISQ + E+ KF++L +++ T I+F N K D
Sbjct: 397 YIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVTENPLIIIFANFKHVCDS 456
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+++ L +HG KSQ+ RE ++ FR VL+ATDVA RGIDIP+V VINY
Sbjct: 457 LSQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIPNVTLVINY 516
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
M + Y HRIGRTGRAG G + TF++ DT++F LK+ L + +P L KH++
Sbjct: 517 QMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLKKGGKRLPDWLYKHQS 576
>gi|157423111|gb|AAI53692.1| LOC549967 protein [Xenopus (Silurana) tropicalis]
Length = 319
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/320 (58%), Positives = 231/320 (72%), Gaps = 11/320 (3%)
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
++GG S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP
Sbjct: 1 VIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP 60
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYL 471
V +L+ MP +N KP+ ++ E EK YR T MF+ATMPPAVERLAR YL
Sbjct: 61 DVQKILEHMPVTNQKPDTDEAEDPEKMTANFESGKHKYRQTVMFTATMPPAVERLARSYL 120
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
R P VV IG+AGK E + Q V +M E+EK +L +L++ D I+FVN KK D++A
Sbjct: 121 RRPAVVYIGSAGKPHERVEQKVFLMSEAEKRKKLLAILEKGFDPPIIIFVNQKKGCDVLA 180
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
K+L+K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM
Sbjct: 181 KSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDM 240
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEAS 650
NIE Y HRIGRTGRAGK+GVA TFLT D+ VFYDLKQ +++S S PPELA H +
Sbjct: 241 AKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSSVFYDLKQAILESPVSSCPPELANHPDA 300
Query: 651 KFKPGTIPDRPPRRNDTVFA 670
+ KPGTI + RR +T+FA
Sbjct: 301 QHKPGTILTK-KRREETIFA 319
>gi|68484469|ref|XP_713845.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
gi|68484548|ref|XP_713805.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|74656226|sp|Q59W52.1|PRP28_CANAL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|46435319|gb|EAK94703.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|46435361|gb|EAK94744.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
Length = 581
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/480 (41%), Positives = 296/480 (61%), Gaps = 21/480 (4%)
Query: 186 VEEKPEEAAALKLKEEAADLYD-TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
VEE+ + + L E ++ D F + HW+ K LEEMT+RDWRIF+ED+NI+ KG
Sbjct: 102 VEEEDTASGFVPLIEMDEEIDDPLFSGQESTHWTNKNLEEMTDRDWRIFKEDYNITTKGK 161
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P+R W EG + +L+ + ++GY+ P+ +Q A+IPL L++RDV+G+AETGSGKT A
Sbjct: 162 NIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLA 221
Query: 305 FVLPMLTYISRLPP--ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIV 362
F++P+L YI + + E + P +++APTRELA QI +E KF LG +V+ I+
Sbjct: 222 FLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPII 281
Query: 363 GGQSIEEQGFRIRQ-GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
GG ++ +I Q G +++ATPGRL+D +ER+ L++C +V+DEADRMIDMGFE
Sbjct: 282 GGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKD 341
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRIY----RTTYMFSATMPPAVERLARKYLRNPVVV 477
+ VLD +P+ E + + RI+ R+T MF+AT+ P VE+L +KYL +P +
Sbjct: 342 LNKVLDKLPT-----EKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKYLIDPGYL 396
Query: 478 TIGTAGKATELISQHVVMMK----ESEKFSRLQRLLDELGDKT----AIVFVNTKKNADM 529
IG AG+A + ISQ + E+ KF++L +++ T I+F N K D
Sbjct: 397 YIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVTENPLIIIFANFKHVCDS 456
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+++ L +HG KSQ+ RE ++ FR VL+ATDVA RGIDIP+V VINY
Sbjct: 457 LSQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIPNVTLVINY 516
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
M + Y HRIGRTGRAG G + TF++ DT++F LK+ L + +P L KH++
Sbjct: 517 QMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLKKGGKRLPDWLYKHQS 576
>gi|149248004|ref|XP_001528389.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032662|sp|A5DU73.1|PRP28_LODEL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|146448343|gb|EDK42731.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 597
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/455 (42%), Positives = 280/455 (61%), Gaps = 21/455 (4%)
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
D R HWS K L EMT+RDWRIF ED+ I+ KG KIP R+W E L P++L +++
Sbjct: 144 DDRNSGHWSTKLLSEMTDRDWRIFNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSF 203
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP--ISEENEAEG 327
G++ P+P+Q A+IP+ L+ RDV+G+AETGSGKT AF+LP+L Y+SR+ ++ E
Sbjct: 204 GFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVRNE 263
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE-----QGFRIRQGCEVVI 382
P A+V+APTRELA QI +E KF LG V+SI+GG+ +E + +G +V+
Sbjct: 264 PLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVV 323
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
TPGRL+D +ER+ ++C Y+V+DEADRMIDMGFE + +++ +P K E
Sbjct: 324 GTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLINLLP----KNEKLSTT 379
Query: 443 LDEKRIY---RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKES 499
+D K + R T M++AT+ P +E++ + YL +P + IG AG+A + I QH +
Sbjct: 380 IDGKLFHLTKRLTMMYTATISPPIEKITKSYLIDPAYIYIGGAGEALDNIDQHFDYLSTY 439
Query: 500 EKFSRLQRLLDEL-GDK------TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ +RL +L+ + G K I+F N K D+++ L++ +HG KSQE
Sbjct: 440 AESARLSKLIKVVQGHKRRNRNALVIIFANFKHVCDVLSLELEQNNLLNVVIHGSKSQEA 499
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +LE FRT + +LVATDVA RGID+P+V+ VINY M + Y HRIGRTGRAG G
Sbjct: 500 REEALEDFRTHQAPILVATDVAARGIDVPNVSLVINYQMSKKFDEYIHRIGRTGRAGNLG 559
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
+ TFL D + F LK+ L VP L ++
Sbjct: 560 ESYTFLDDADAETFMPLKKFLKSGRKKVPEWLYRY 594
>gi|302414960|ref|XP_003005312.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
gi|261356381|gb|EEY18809.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
Length = 510
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 217/508 (42%), Positives = 299/508 (58%), Gaps = 65/508 (12%)
Query: 20 KAQREQLALERRQEQIAQQKRRQEQQQ-QLLSQPQTHGRNSSDSRDRERERHRREREEEA 78
KA+ E L R+Q++ A++K E++ + + P + R+ R ER++ R +
Sbjct: 24 KAKNEAEDLRRKQQEDARKKAESEKKWLEKANAPAENHRDHDTDRPPERQQQDRRSGQNG 83
Query: 79 K-ARERARLEKLAERERERELELIKEQYLG-------SKKPKKRVIKPSEKFRFSFDWEN 130
K A ++ ++ E E E++ ++E+YLG S K+ +P+E F FDW+
Sbjct: 84 KGASKKGGDARMTEEEFEKKQ--LRERYLGPEVNRNSSFSAAKKRKRPTE---FKFDWDE 138
Query: 131 TEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKP 190
E+ M +L + H+ +G DRR + LA K +
Sbjct: 139 GEEPRSRMISLRRGHHQ------QGRVIVWDRR-GRDLARKRAERF-------------- 177
Query: 191 EEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPM 250
F R W++K L EMT RDWRIF+EDF I+ KG IP PM
Sbjct: 178 -----------------GFGKR----WTDKALNEMTARDWRIFKEDFGIATKGGAIPNPM 216
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
RNW E L LL V RVGY +P+PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L
Sbjct: 217 RNWDESGLPGRLLDIVHRVGYNDPTPIQRAAIPIALQARDLIGVAVTGSGKTASFLLPLL 276
Query: 311 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
YIS LPP+ E N+ +GPY +++APTREL QQIE E KFA LG +VVSIVGG S+EEQ
Sbjct: 277 VYISDLPPLGEMNKNDGPYGLILAPTRELVQQIESEANKFATPLGFRVVSIVGGHSLEEQ 336
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
F +R G E+++ATPGRL+DC+ERR VL QC YV++DEADRMID+GFE V +LDA+P
Sbjct: 337 AFALRNGAEIIVATPGRLVDCIERRLLVLGQCCYVIMDEADRMIDLGFEEPVNKILDALP 396
Query: 431 SSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA 482
SN KP+ ++ E L K YR T M++ATMP VER+A+KYLR P +VTIG
Sbjct: 397 VSNEKPDTDEAENAQLMKRYLGGKDRYRQTMMYTATMPSVVERIAKKYLRRPAIVTIGNI 456
Query: 483 GKATELISQHVVMMK-ESEKFSRLQRLL 509
G+A + + Q V + E ++ RLQ++L
Sbjct: 457 GEAVDTVEQRVEFVSGEDKRKKRLQQIL 484
>gi|50305859|ref|XP_452890.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660559|sp|Q6CT49.1|PRP28_KLULA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49642023|emb|CAH01741.1| KLLA0C15433p [Kluyveromyces lactis]
Length = 539
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/465 (43%), Positives = 281/465 (60%), Gaps = 39/465 (8%)
Query: 172 NEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY--------DTFDMRVDRHWSEKKLE 223
N + + E+ +E V +P++ L L ++ADL D + +HWSEKK E
Sbjct: 51 NYRNLDEDELYEEQVSNEPDDL--LFLARKSADLLKKRQNEDESIVDNYLGKHWSEKKYE 108
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE-LLRAVER-VGYKNPSPIQMAA 281
EM+ RDWRI EDFNIS KG + +P+RNW E KL PE LL + + Y P+ IQ +
Sbjct: 109 EMSTRDWRILSEDFNISSKGGTVEKPLRNWHELKLIPEDLLNIITNDLHYNEPTSIQRST 168
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IP + RD IG+A TGSGKT AF+LP+L + +PP++ + +GP A+V+APTRELAQ
Sbjct: 169 IPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHDGPLALVLAPTRELAQ 228
Query: 342 QIEEETVKFAHYLG--IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
QI+ E +VSIVGG S+EE +R GC++++ATPGRL+DCL+ L
Sbjct: 229 QIQHEGQSITKLWKRPCNIVSIVGGHSLEEISANLRDGCDILVATPGRLLDCLDSHLLFL 288
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS-SNLKPENEDEELDEKRIYRTTYMFSAT 458
Q N +VLDEAD+MID GFE Q+ +L + SN R T MF+AT
Sbjct: 289 KQVNTLVLDEADKMIDFGFEDQLTTILAKTETISN----------------RQTMMFTAT 332
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFSRLQRLLDELGDKT 516
P +E++A YL+ P VT+G G+ ++ + +V + E EK L + D L +
Sbjct: 333 FSPTIEKVANGYLKKPSYVTVG--GEESKPKIKQIVRYVPDEEEKLKILVK--DFLPNYK 388
Query: 517 A--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
A I+F+N K+ AD + L + +R TTLHG KSQEQRE SL R + ++L+ATDVA
Sbjct: 389 APIIIFINYKRTADWLFDKLREARFRATTLHGSKSQEQREHSLSLLRNGKVDILIATDVA 448
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
GRGIDIP+V+ V+N P + + + HR+GRTGRAGKTG A TFLT
Sbjct: 449 GRGIDIPNVSLVVNLQFPKSFDSFVHRVGRTGRAGKTGTALTFLT 493
>gi|302308874|ref|NP_985999.3| AFR452Cp [Ashbya gossypii ATCC 10895]
gi|299790837|gb|AAS53823.3| AFR452Cp [Ashbya gossypii ATCC 10895]
gi|374109229|gb|AEY98135.1| FAFR452Cp [Ashbya gossypii FDAG1]
Length = 559
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/429 (44%), Positives = 269/429 (62%), Gaps = 20/429 (4%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAE-GKLTPELLRAV-ERVGYK 272
RHWSE EEMT RDWRI RED+NIS KG + P+R+W E G++ EL+R V ER+G+
Sbjct: 119 RHWSELAREEMTARDWRIMREDYNISTKGGGVRAPLRDWGESGEMPAELVRIVQERLGFG 178
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVV 332
P+PIQ IP L RD +G+A TGSGKT AF+LP+ + RL P++ +GP A+V
Sbjct: 179 EPTPIQRVTIPNALHGRDYVGVAATGSGKTLAFLLPIFAKLGRLAPLNAVTRQDGPRALV 238
Query: 333 MAPTRELAQQIEEETVKFAHYLG--IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
+APTRELAQQIE + +F + V SIVGG S EE ++ GCEV++ATPGRL+D
Sbjct: 239 LAPTRELAQQIEAQARQFLSHWQRPCPVASIVGGHSFEEIALSLQGGCEVLVATPGRLLD 298
Query: 391 CLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYR 450
CLE VL Q +VLDEADRM+DMGFE Q+ VL + + L E+++
Sbjct: 299 CLEHHMLVLRQVATLVLDEADRMVDMGFEEQLTDVLARI-----------DVLAERQVL- 346
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD 510
MF+ATM +E++A YL+N V T+G A ++ + E ++F++L R +
Sbjct: 347 ---MFTATMTHTIEKIANGYLKNAVYATVGGADAEPQIRQLVEYVPAEEQRFTKLTREVL 403
Query: 511 ELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLV 569
I+F+N K A+ +++ ++ +R T LHG +SQEQRE SL R+ + ++++
Sbjct: 404 PNFAPPIIIFINYKATANWLSEKFERETRFRTTVLHGSRSQEQREHSLRQLRSGKVDIMI 463
Query: 570 ATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDL 629
AT+VAGRGIDIP+V+ V+N+ MP +E Y HRIGRTGRAG++G A TFLT D + +
Sbjct: 464 ATNVAGRGIDIPNVSLVVNFQMPFQLEDYVHRIGRTGRAGQSGTALTFLTDKDENALVET 523
Query: 630 KQMLIQSNS 638
+ N+
Sbjct: 524 LYEYVTKNN 532
>gi|156838354|ref|XP_001642884.1| hypothetical protein Kpol_1007p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156113461|gb|EDO15026.1| hypothetical protein Kpol_1007p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 605
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 195/430 (45%), Positives = 270/430 (62%), Gaps = 32/430 (7%)
Query: 207 DTFD-MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
D+F+ + +HW EK L EM+ERDWRI ED++I+ KG I PMRNW E L P L
Sbjct: 136 DSFEHAYMGKHWKEKSLSEMSERDWRILSEDYHITTKGGNILHPMRNWDELGLIPNDLLE 195
Query: 266 V--ERVGYKNPSPIQMAAIPLGLQQ------RDVIGIAETGSGKTAAFVLPMLTYI--SR 315
V ++ + +PSPIQ +IP Q+ RD++GIA TGSGKT AFV+P+L + +
Sbjct: 196 VLKNKLNFISPSPIQRISIPNICQKNGHSTNRDLMGIASTGSGKTLAFVIPILIKLLGTA 255
Query: 316 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG-----IKVVSIVGGQSIEEQ 370
+ P+S + EGP A+++APTRELAQQI+ E K I + IVGG SIEE
Sbjct: 256 IRPLSLK-VIEGPKALILAPTRELAQQIQAEIKKILSLSSNELTKITSICIVGGHSIEEI 314
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
+ + +GC++++ATPGRLIDCLE V++ N +VLDEAD+MID GFE QV +L +
Sbjct: 315 SYDLSKGCDILVATPGRLIDCLESHLIVIDNVNTIVLDEADKMIDFGFEDQVTTILSKL- 373
Query: 431 SSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
+++E + MF+ATM P +ER+A YLRN V+IG + + I+
Sbjct: 374 -----------QINEMKDNLQKIMFTATMTPTIERIANGYLRNASYVSIGNSEEFVPHIN 422
Query: 491 QHVVMM-KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL-DKLGYRVTTLHGGK 548
Q V E+ KF +L+++L EL I+F+N KK AD +A L ++ ++VTTLHG K
Sbjct: 423 QLVYYSPNENSKFRKLKQVL-ELYPPPVIIFINYKKTADWLATKLQEETNFKVTTLHGSK 481
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
SQ+QRE SL RT R +++AT+VA RGIDIP+V V+NY + + E Y HRIGRTGRA
Sbjct: 482 SQDQREYSLNLLRTGRVQIMIATNVAARGIDIPNVGLVVNYQISDSFEDYIHRIGRTGRA 541
Query: 609 GKTGVATTFL 618
GK G A +F+
Sbjct: 542 GKEGTAISFV 551
>gi|255729782|ref|XP_002549816.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132885|gb|EER32442.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 571
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/453 (40%), Positives = 276/453 (60%), Gaps = 20/453 (4%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HW +K+L++MT+RDWRIF+ED+NI+ KG IP P+R+W E + +L+ + ++G+ P+
Sbjct: 123 HWKDKQLKDMTDRDWRIFKEDYNITTKGKNIPNPLRSWDESSINSKLISIIYKLGFNQPT 182
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP--ISEENEAEGPYAVVM 333
IQ A+IPL L +RDV+G+AETGSGKT +F++P+ YI + I E P +++
Sbjct: 183 SIQRASIPLSLIKRDVVGVAETGSGKTLSFLIPLFNYILSIDENYIKYEKSLNMPMGLIL 242
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI-RQGCEVVIATPGRLIDCL 392
APTRELA QI +E KF LG V+SI+GG I + G +++ATPGRL+D +
Sbjct: 243 APTRELAIQITKEAEKFCKKLGYVVLSIIGGHQYSNTIDDIDKSGVHIIVATPGRLVDSI 302
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY--- 449
+R+ L++C Y+++DEADRMIDMGFE + ++ +P+S+ + D RI+
Sbjct: 303 DRKIIDLSKCYYLIMDEADRMIDMGFEKDLNKIMSKLPNSDQLSQTID-----GRIFHLD 357
Query: 450 -RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM----KESEKFSR 504
R+T MF+AT+ P +E++ + YL +P V IG AG+A + I Q + E+ KF++
Sbjct: 358 KRSTMMFTATISPPIEKITKNYLIDPGYVYIGGAGEALDNIEQQFEYLPSATSETTKFNK 417
Query: 505 LQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
L + + T I+F N K D +++ L +HG KSQE RE+++ F
Sbjct: 418 LMKYIGNHMKNTRNPLIIIFANFKHVCDSLSQELSSNHLDNVVIHGSKSQEARELAINQF 477
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +L+ATDVA RGIDIP+V VIN+ M + Y HRIGRTGRAG G + TF++
Sbjct: 478 RNHESEILIATDVAARGIDIPNVTLVINFQMVNKFDEYIHRIGRTGRAGNKGKSFTFISE 537
Query: 621 HDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 653
D+DVF LK+ L + VP L ++A K
Sbjct: 538 QDSDVFIPLKKFLKKGGKRVPDWLYNYQAQTLK 570
>gi|448511497|ref|XP_003866542.1| hypothetical protein CORT_0A07180 [Candida orthopsilosis Co 90-125]
gi|380350880|emb|CCG21103.1| hypothetical protein CORT_0A07180 [Candida orthopsilosis Co 90-125]
Length = 590
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 336/643 (52%), Gaps = 99/643 (15%)
Query: 35 IAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRREREEEAKARERARLEKLAERER 94
I + KR + +QQ PQ G+ + S R + R+ E +
Sbjct: 22 IPKSKRSKIAEQQTSEIPQVQGKAPTSSSWRNTVKPSRKSLEPS---------------- 65
Query: 95 ERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
I + Y KKP +R +F FDW+ +EDT+ ++ + R
Sbjct: 66 ------IWQNYQAPKKPARR--------KFQFDWDESEDTTITTSSTF-----------R 100
Query: 155 GFRAGMDRRE--QKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMR 212
D E Q++L A N+ +++E+
Sbjct: 101 RILPSFDDEEEDQEQLDAANDPLLKDELSG------------------------------ 130
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSK-IPRPMRNWAEGKLTPELLRAVERVGY 271
HWS K++ +MTERDWRIF E+F+I+Y+G K +P+ +R W E +L + + ++ +GY
Sbjct: 131 ---HWSTKQVSQMTERDWRIFNEEFSITYRGGKNVPQAIRYWQECELGKPIQQCIQELGY 187
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP--ISEENEAEGPY 329
P+PIQ A+IP+ L +RDV+G+AETGSGKT A++LP+ Y+S++ + E
Sbjct: 188 MTPTPIQRASIPISLAKRDVVGVAETGSGKTLAYLLPIFQYLSQVDSNFMQYEKSKNEAL 247
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI-----RQGCEVVIAT 384
A+V+APTREL QI + K LG VVSI+GG ++ I + G ++++AT
Sbjct: 248 ALVLAPTRELVLQITVQAEKLCTRLGYNVVSIIGGHQYQDTVEEIENGGGKGGVDIIVAT 307
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
PGRL+D ++R+ L +C Y+V+DEADRMID+GFE + ++ +P+ + D ++
Sbjct: 308 PGRLLDSIDRKIINLQKCYYLVMDEADRMIDLGFEKDLHKLIAHLPNQDTLQRTIDGKIF 367
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE---- 500
R + MF+AT+ P +E+L + YL +P+ VTIG AG+A + I Q + S+
Sbjct: 368 HLN-QRISSMFTATISPPIEKLTKSYLVDPIYVTIGGAGEALDNIDQKFEYLPSSKLQTG 426
Query: 501 ------KFSRLQRLLDELG----DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQ 550
K L RL+ + I+F N K D +++ L+ +HG KSQ
Sbjct: 427 QSMERIKLESLLRLIQTHKHNNPNGLIIIFANFKLVVDTLSEELESKQLPNVIIHGSKSQ 486
Query: 551 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 610
EQRE +LE F++ ++LVATDVA RGIDIP V+ VIN+ MP + Y HRIGRTGRAG+
Sbjct: 487 EQREFALEQFKSHDPSILVATDVAARGIDIPQVSLVINFQMPHKFDEYIHRIGRTGRAGQ 546
Query: 611 TGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 653
G + +F+ DT +F +LK+ L + VP L ++ ++ K
Sbjct: 547 FGTSISFVDDEDTGIFSELKKFLTKGGKKVPDWLYRYNSTTIK 589
>gi|241949959|ref|XP_002417702.1| DEAD/DEAH box helicase , putative [Candida dubliniensis CD36]
gi|223641040|emb|CAX45414.1| DEAD/DEAH box helicase , putative [Candida dubliniensis CD36]
Length = 568
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/480 (41%), Positives = 291/480 (60%), Gaps = 21/480 (4%)
Query: 186 VEEKPEEAAALKLKEEAADLYD-TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
VEE+ + + L + +L D F + HW+ KKLEEMT+RDWRIF+ED+NI+ KG
Sbjct: 89 VEEEDTASGFVPLIDMDEELDDPLFSGQESTHWTNKKLEEMTDRDWRIFKEDYNITTKGK 148
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P+R W EG +L+ + ++GY P+ +Q A+IPL L +RDV+G+AETGSGKT A
Sbjct: 149 NIPNPLRYWHEGLNNDKLVSIISQLGYDEPTSVQRASIPLALMKRDVVGVAETGSGKTLA 208
Query: 305 FVLPMLTYISRLPP--ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIV 362
F++P+L YI + + E + P +++APTRELA QI +E KF LG +V+ I+
Sbjct: 209 FLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPII 268
Query: 363 GGQSIEEQGFRIRQ-GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
GG ++ +I Q G +++ATPGRL+D +ER+ L++C +V+DEADRMIDMGFE
Sbjct: 269 GGHQYQDTINQIDQTGVHLIVATPGRLVDSIERKIIDLSKCYCLVMDEADRMIDMGFEKD 328
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRIY----RTTYMFSATMPPAVERLARKYLRNPVVV 477
+ +LD +P+ E + + RI+ R+T MF+AT+ P VE++ +KYL +P +
Sbjct: 329 LNKILDKLPT-----EKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKITKKYLIDPGYL 383
Query: 478 TIGTAGKATELISQHVVMMK----ESEKFSRLQRLLDELGDKT----AIVFVNTKKNADM 529
IG AG+A + I+Q + E+ K ++L +++ T I+F N K D
Sbjct: 384 YIGGAGEALDNINQSFEFLSSATAEATKLNKLIKIIRSHWRVTENPLIIIFANFKHVCDS 443
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
++ L +HG KSQ+ RE ++ FR VL+ATDVA RGIDIP+V VINY
Sbjct: 444 LSTELSSNDINNVVIHGSKSQDVREQAITKFRNHESEVLIATDVAARGIDIPNVTLVINY 503
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
M + Y HRIGRTGRAG G + TF++ D ++F LK+ L + +P L KH++
Sbjct: 504 QMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDMEIFTPLKKFLKKGGKRLPDWLYKHQS 563
>gi|119578421|gb|EAW58017.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_g [Homo
sapiens]
Length = 304
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 179/304 (58%), Positives = 219/304 (72%), Gaps = 11/304 (3%)
Query: 377 GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP 436
GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V +L+ MP SN KP
Sbjct: 2 GCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKP 61
Query: 437 ENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P VV IG+AGK E
Sbjct: 62 DTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHE 121
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGG 547
+ Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+K+GY TLHGG
Sbjct: 122 RVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGG 181
Query: 548 KSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 607
K QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE Y HRIGRTGR
Sbjct: 182 KGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGR 241
Query: 608 AGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRND 666
AGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KPGTI + RR +
Sbjct: 242 AGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPGTILTK-KRREE 300
Query: 667 TVFA 670
T+FA
Sbjct: 301 TIFA 304
>gi|254577027|ref|XP_002494500.1| ZYRO0A02948p [Zygosaccharomyces rouxii]
gi|238937389|emb|CAR25567.1| ZYRO0A02948p [Zygosaccharomyces rouxii]
Length = 557
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/434 (44%), Positives = 271/434 (62%), Gaps = 30/434 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
+HW+EK +EM++RDWRIF+EDF I+ +G + P+R+W E K V+ + Y P
Sbjct: 119 KHWTEKTRQEMSDRDWRIFKEDFGITIRGGSVENPLRSWYELKNEQMADAIVKNLKYHEP 178
Query: 275 SPIQMAAIP--LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP--PISEENEAEGPYA 330
+PIQ AA+P + RD++GIA TGSGKT AF++P+L I +LP P+ + + +GP A
Sbjct: 179 TPIQRAAVPNVCNKKFRDLLGIASTGSGKTLAFLIPILMKIDQLPSRPLVLK-KMDGPLA 237
Query: 331 VVMAPTRELAQQIEEETVKFAHYLG--IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
+++APTRELAQQIE+E + G +V SIVGG SIEE ++ QG ++++ATPGRL
Sbjct: 238 LILAPTRELAQQIEKEAEELIDAWGKNCEVASIVGGHSIEEISLQVSQGTDILVATPGRL 297
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI 448
IDCLE L + +VLDEADRMIDMGFE QV +L +
Sbjct: 298 IDCLENHVLTLGKVETLVLDEADRMIDMGFEEQVTSILGNLTQK---------------- 341
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRL 508
R T MF+A+M P E++A YL+NPV VT+ + +T +I Q V + E+ R QR+
Sbjct: 342 -RQTMMFTASMTPGTEKIAAGYLKNPVRVTVSGSQGSTPMIRQLVEHIGSEEQ--RFQRI 398
Query: 509 LDELGDKTA--IVFVNTKKNAD-MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
++ L A I+F+N K+ AD +V K + Y+VT L+G KSQEQRE SL+ R +
Sbjct: 399 VEFLPQYRAPIIIFINYKRAADWLVQKFYKETQYKVTVLYGSKSQEQREQSLQLLRKGKV 458
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
+++AT+VA RG+D+PDV+ VIN+ + E Y HRIGRTGRAG G A TFL D ++
Sbjct: 459 QIMIATNVAARGLDVPDVSLVINFQLSKTFEDYVHRIGRTGRAGHEGTAITFLDDEDPEL 518
Query: 626 FYDLKQMLIQSNSP 639
+L + L Q N+P
Sbjct: 519 VKELYKYL-QENNP 531
>gi|256270725|gb|EEU05887.1| Prp28p [Saccharomyces cerevisiae JAY291]
Length = 588
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 186/419 (44%), Positives = 263/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGVVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ AIP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRIAIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>gi|343959278|dbj|BAK63496.1| probable ATP-dependent RNA helicase DDX23 [Pan troglodytes]
Length = 304
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/304 (58%), Positives = 218/304 (71%), Gaps = 11/304 (3%)
Query: 377 GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP 436
GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V +L+ MP SN KP
Sbjct: 2 GCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKP 61
Query: 437 ENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P VV IG+AGK E
Sbjct: 62 DTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHE 121
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGG 547
+ Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+K+GY TLHGG
Sbjct: 122 RVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGG 181
Query: 548 KSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGR 607
K QEQRE +L + ++LVA DVAGRGIDI DV+ V+NYDM NIE Y HRIGRTGR
Sbjct: 182 KGQEQREFALSNLKAGAKDILVAIDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGR 241
Query: 608 AGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRND 666
AGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KPGTI + RR +
Sbjct: 242 AGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPGTILTK-KRREE 300
Query: 667 TVFA 670
T+FA
Sbjct: 301 TIFA 304
>gi|259145479|emb|CAY78743.1| Prp28p [Saccharomyces cerevisiae EC1118]
Length = 588
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 262/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGAVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>gi|190404808|gb|EDV08075.1| pre-mRNA splicing factor ATP-dependent RNA helicase PRP28
[Saccharomyces cerevisiae RM11-1a]
gi|207346532|gb|EDZ73004.1| YDR243Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323338187|gb|EGA79420.1| Prp28p [Saccharomyces cerevisiae Vin13]
gi|365766325|gb|EHN07823.1| Prp28p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 588
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 262/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGAVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>gi|398366237|ref|NP_010529.3| Prp28p [Saccharomyces cerevisiae S288c]
gi|1172596|sp|P23394.2|PRP28_YEAST RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28;
AltName: Full=Helicase CA8
gi|666103|emb|CAA40255.1| pre-mRNA splicing factor RNA helicase PRP28 (helicase CA8)
[Saccharomyces cerevisiae]
gi|817829|emb|CAA89729.1| Prp28p [Saccharomyces cerevisiae]
gi|285811259|tpg|DAA12083.1| TPA: Prp28p [Saccharomyces cerevisiae S288c]
gi|392300358|gb|EIW11449.1| Prp28p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 588
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 262/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>gi|323349261|gb|EGA83490.1| Prp28p [Saccharomyces cerevisiae Lalvin QA23]
Length = 588
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 262/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGAVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTXIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>gi|151942219|gb|EDN60575.1| RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 588
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 262/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGAVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGSAVSFVS 542
>gi|349577299|dbj|GAA22468.1| K7_Prp28p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 588
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 261/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE-LLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGAVENPLRNWEELNIIPRGLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>gi|401624238|gb|EJS42303.1| prp28p [Saccharomyces arboricola H-6]
Length = 588
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/440 (42%), Positives = 269/440 (61%), Gaps = 26/440 (5%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE-LLRAV-ERVGYK 272
+HW+EK L +MTERDWRI +EDF I KG + PMRNW + + PE LLR V +++ +
Sbjct: 136 KHWTEKSLSKMTERDWRILKEDFAIVTKGGAVENPMRNWEDRNIIPEDLLRIVTQKLQFH 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE-AEGP 328
+P+PIQ IP + RD +G+A TGSGKT AF++P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNTKKYRDFLGVASTGSGKTLAFIIPILIRLSRSPPRPPSLKIMDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI E+ K +VVSIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIHAESEKVTKIWSRENDYDCRVVSIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
I+R T MF+ATM +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 -----IHRQTMMFTATMTAVIEKIAAGYMKKPVYATIGLDTGSEPLIQQIVEYADSDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + + I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FRKLKSIVTKY-EPPIIIFINYKQTADWLAETFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R ++VAT+VA RG+DIP+V+ V+N+ +P I+ Y HRIGRTGRA K G A +F++
Sbjct: 484 RRGEAQIMVATNVAARGLDIPNVSLVVNFQIPKKIDDYVHRIGRTGRAAKEGTAISFVSS 543
Query: 621 HDTDVFYDLKQMLIQSNSPV 640
+ + Q ++ + P+
Sbjct: 544 TEDETLVRELQKYVKKHDPL 563
>gi|440298037|gb|ELP90678.1| DEAD box ATP-dependent RNA helicase, putative, partial [Entamoeba
invadens IP1]
Length = 536
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/520 (38%), Positives = 297/520 (57%), Gaps = 51/520 (9%)
Query: 94 RERELELIKEQYLGSKKPKKRVIKPSEKFRFS-----FDWENTEDTSRDMNALYQNPHEA 148
+E + E+I +QY G KP K++ KPSEKF+ + +DT+ D N +Y P
Sbjct: 47 KEEQAEII-QQYRGGIKPLKKLQKPSEKFKIPSLRELLTVKPEDDTTNDPNEMYNTPISY 105
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
LFGRG G + V P+ + + +
Sbjct: 106 TPLFGRGTFGG------------------------DFVGHMPKSKKSSRSSTHTDN---- 137
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
+ + K LEEMTE DWRI RE+ ++S G ++ RP+R W++ PE+ + +
Sbjct: 138 -----EMNIITKSLEEMTENDWRIVRENISLSVSGGEVVRPLRKWSDVTFLPEIQATLSK 192
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+ Y P+P+Q A IP+ L RD+IG+AETG+GKTAA+V+P++++IS+LP ++ E GP
Sbjct: 193 LNYSEPTPVQAATIPIALNMRDIIGLAETGTGKTAAYVIPLVSFISKLPRLTRETACRGP 252
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
Y +V+APTRELA+QI++E KF+ L I+V+ +GG+ I+EQ I +G EV++ PGR+
Sbjct: 253 YGLVLAPTRELAKQIDDEIKKFSEGLKIRVLCCIGGEEIDEQIKAIEEGVEVLVGAPGRI 312
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE------- 441
D L + Y VL QC Y VLDEAD+MIDMG + QV + + MP LK +++E
Sbjct: 313 RDLLRQMYLVLGQCYYCVLDEADKMIDMGLDVQVREIFNEMPP--LKSGSDEEMKRDELN 370
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
L+ K RTT MFSATMP +E+L +Y+R + +++G G A + + Q V+ ++E +K
Sbjct: 371 SLNGKPEKRTTLMFSATMPANLEKLTGEYIRRGIKISVGRKGVADK-VRQRVMWVEEEKK 429
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
L +L++ + K IVF N K + D V L++ + +HGG Q++R +LE F+
Sbjct: 430 GVSLLKLVETIVGK-VIVFANKKTSVDEVVAYLEEKKVKACGIHGGMRQDERTKALETFK 488
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE-MYTH 600
VLVAT V RGIDI V +VINYD P N E +YT
Sbjct: 489 KGNVTVLVATSVLSRGIDIESVDNVINYDSPNNFERLYTS 528
>gi|348665957|gb|EGZ05785.1| hypothetical protein PHYSODRAFT_533185 [Phytophthora sojae]
Length = 2125
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/431 (42%), Positives = 270/431 (62%), Gaps = 24/431 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++++++E + R++ I +G PRP++ W + + +L+ +++ G++ P IQ
Sbjct: 1493 KEIKDLSEEEVEAQRKESEIKVRGKSCPRPLQKWTQCGFSVRMLQLIKKHGFEEPFAIQK 1552
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P + RDVIGIA+TGSGKT AF+LPM +I PP+ E EGP ++MAP REL
Sbjct: 1553 QALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILAQPPLQEN---EGPIGIIMAPAREL 1609
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID--CLER-RY 396
AQQI ET KF+ LG++ ++ GG S+ EQ +++G ++VI TPGR+ID C+ +
Sbjct: 1610 AQQIYMETRKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPGRMIDILCMSAGKM 1669
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + YVVLDEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 1670 VSLQRVTYVVLDEADRMFDMGFEPQITKIM-----MNIRPD------------RQTLLFS 1712
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P +VE LARK LR PV +T+GT A+ I+Q+V + +E +KF RL +LL +K
Sbjct: 1713 ATFPRSVESLARKVLRKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQLLGLWYEKG 1772
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFVN ++ D + ++L K GY +LHGGK Q R+ +++ F+ K V+VAT VAG
Sbjct: 1773 NILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTVMVATSVAG 1832
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+ VINY P ++E Y HR+GRTGRAG+ G A TF++ + + DL + L
Sbjct: 1833 RGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISPDEEEYSVDLVKALEN 1892
Query: 636 SNSPVPPELAK 646
+ VPPEL +
Sbjct: 1893 AKQTVPPELTQ 1903
>gi|444319286|ref|XP_004180300.1| hypothetical protein TBLA_0D02800 [Tetrapisispora blattae CBS 6284]
gi|387513342|emb|CCH60781.1| hypothetical protein TBLA_0D02800 [Tetrapisispora blattae CBS 6284]
Length = 587
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/425 (44%), Positives = 259/425 (60%), Gaps = 35/425 (8%)
Query: 213 VDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV--ERVG 270
+ +HWSEK EEMT+RDWRIFREDFNIS KGS +P+R W E L P+++ + + +
Sbjct: 130 IGKHWSEKSWEEMTDRDWRIFREDFNISTKGSNAEQPLRYWNEKGLMPDIVLDIIKKELK 189
Query: 271 YKNPSPIQMAAIP----LGLQQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEE 322
++ PS IQ AIP +RD +GIA TGSGKT AFVLP++ + R+P + +
Sbjct: 190 FEEPSAIQRVAIPNISSKKTPKRDFLGIASTGSGKTLAFVLPIICSLIKSSPRIPLLKIK 249
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHY-------LGIKVVSIVGGQSIEEQGFRIR 375
N GP A+++APTRELAQQ ++E Y L VS++GG SI+EQ +R
Sbjct: 250 N---GPKALILAPTRELAQQCQQEASNILKYIFERDPSLNFNSVSVIGGHSIQEQLQDLR 306
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
G +++IATPGRLID LE V + +++VLDEADRM+D+GFE Q++ +L + ++
Sbjct: 307 NGADILIATPGRLIDVLESHMTVFSDLDFLVLDEADRMVDLGFEDQLLTILTHIQKAS-- 364
Query: 436 PENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-V 494
+ T MF+ATM P +E++A +YL+ PV TIG A I Q V
Sbjct: 365 ----------TILNIQTIMFTATMSPKIEKIANRYLKKPVYATIGNATSTEPQIEQIVDY 414
Query: 495 MMKESEKFSRLQRLLDELGDKTAIVFVNTKKNAD-MVAKNLDKLGYRVTTLHGGKSQEQR 553
E KF +L + I+F+N K+ AD +V K + +RVTT+HG KSQEQR
Sbjct: 415 AANEDVKFKKLLEYVSNFPSPI-IIFINYKRTADWLVDKFYQETTFRVTTIHGSKSQEQR 473
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
E +L R+ + ++L+AT+VA RGIDIP+V+ V+NY MP E Y HRIGRTGRA + G
Sbjct: 474 EQALNNLRSGKAHILIATNVAARGIDIPNVSLVVNYQMPLKFEDYIHRIGRTGRASQKGT 533
Query: 614 ATTFL 618
A T L
Sbjct: 534 AVTLL 538
>gi|448089675|ref|XP_004196871.1| Piso0_004099 [Millerozyma farinosa CBS 7064]
gi|448093989|ref|XP_004197902.1| Piso0_004099 [Millerozyma farinosa CBS 7064]
gi|359378293|emb|CCE84552.1| Piso0_004099 [Millerozyma farinosa CBS 7064]
gi|359379324|emb|CCE83521.1| Piso0_004099 [Millerozyma farinosa CBS 7064]
Length = 577
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 184/458 (40%), Positives = 279/458 (60%), Gaps = 24/458 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV--GY 271
++HW +KKL EMT RDWRI +ED++I+ +G + P+R+W E L P L+ + +V Y
Sbjct: 118 EKHWKDKKLSEMTARDWRIMKEDYSITSRGD-VEYPLRSWEESNL-PTKLQNILKVELKY 175
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR------LPPISEENEA 325
+PSPIQ A IP L+ +D++G+AETGSGKT A++LP+L+YI L E+ A
Sbjct: 176 LDPSPIQRATIPSALKLKDLVGVAETGSGKTLAYLLPLLSYIMNIDERYLLYEHQLEHNA 235
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
P +++AP+RELA QI +E KF LG+ VV+I+GG EE F I+ G +V+ATP
Sbjct: 236 NRPLGLILAPSRELAIQITKEAKKFTDKLGLNVVTIIGGHQYEETVFSIKDGVHIVVATP 295
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+D +ER + Q + V+DEAD+MIDMGFE + ++ +P S+ E E+
Sbjct: 296 GRLVDSIERGIIDIGQSFFFVIDEADKMIDMGFEKSLNQIVGYLPGSSSLSGEESEKFKV 355
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-----ES- 499
R+ T MF+AT+ P +E+L + YL P + IG AG+ I Q K ES
Sbjct: 356 DRL--VTLMFTATLSPTIEKLTKNYLNQPGYIIIGEAGEVVNRIEQKFYYQKGVSSDESL 413
Query: 500 --EKFSRLQRLL----DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
E+ ++L +L+ D + I+F N KK + ++ +L+ Y +HG KSQ+ R
Sbjct: 414 YKERLAQLTKLIKSHVSSHPDYSVIIFSNYKKTCEELSLHLEDERYHNVVIHGSKSQDVR 473
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
E ++ FR ++ +L+ATDVA RGID+P+V+ V+N+ MP E Y HRIGRTGRAG+ G
Sbjct: 474 ERVIDSFRKRKERILIATDVASRGIDVPNVSLVVNFQMPKKFEEYIHRIGRTGRAGQKGT 533
Query: 614 ATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
+ +F+ D+++ +LK+ L + P P L +H +++
Sbjct: 534 SFSFIDDSDSEILPELKKYLSKGRIPCPEWLLRHHSTQ 571
>gi|367000081|ref|XP_003684776.1| hypothetical protein TPHA_0C01860 [Tetrapisispora phaffii CBS 4417]
gi|357523073|emb|CCE62342.1| hypothetical protein TPHA_0C01860 [Tetrapisispora phaffii CBS 4417]
Length = 607
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/438 (42%), Positives = 273/438 (62%), Gaps = 33/438 (7%)
Query: 199 KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
KE ++ ++ + + +HW +K EMT+RDWR+ E FNIS KGS P+R+W + +
Sbjct: 121 KETQSNKFNIENRYLGKHWRDKDYSEMTDRDWRVMEETFNISVKGSGYRYPLRDWMDTHI 180
Query: 259 TPELLRAV--ERVGYKNPSPIQMAAIP-----LGLQQR-DVIGIAETGSGKTAAFVLPML 310
P + + E++ ++ P+PIQ AIP +G + D +GIAETGSGKT +FVLP+L
Sbjct: 181 IPNDMVEIIKEKLNFETPTPIQRIAIPNICGKVGHSTKNDFMGIAETGSGKTFSFVLPIL 240
Query: 311 TYISR--LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV-----VSIVG 363
+SR P+S + + +GP A+++APTRELAQQI+ E F Y G K VSIVG
Sbjct: 241 IKLSRSEFRPMSIK-KMDGPKALILAPTRELAQQIQSEIEHFIQYWGGKSLEYTSVSIVG 299
Query: 364 GQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVV 423
G SIEE F+I +G ++++ATPGRLIDCLE + VLN +VLDEAD+MID+GFE Q+
Sbjct: 300 GYSIEELTFKISKGMDILVATPGRLIDCLESKLIVLNDIETLVLDEADKMIDLGFEEQLS 359
Query: 424 GVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG 483
+L + S K + T MFSATM P +E+L YL P+ +G+
Sbjct: 360 TILSYVASYKSKDTVQ------------TIMFSATMSPDIEKLTTSYLHKPIFAKVGSPK 407
Query: 484 KATELISQHVVMMKESEK--FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL-DKLGYR 540
A E I Q +V E+E+ F +++ LL D I+F+N K+ AD + K + ++ +
Sbjct: 408 SAIERIEQ-IVRYSETEESTFDKIKELLYGF-DSPIIIFINYKRTADWLYKKIQEETSFH 465
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
T LHG KSQ+QRE S++ ++ + V++AT+VA RGIDIP+V+ VIN+ +P + E Y H
Sbjct: 466 ATILHGSKSQDQREHSVKLLKSGKVQVMIATNVAARGIDIPNVSLVINFQIPSSFEDYIH 525
Query: 601 RIGRTGRAGKTGVATTFL 618
RIGRTGRAG +G A +F+
Sbjct: 526 RIGRTGRAGNSGTAVSFM 543
>gi|344228675|gb|EGV60561.1| P-loop containing nucleoside triphosphate hydrolase protein
[Candida tenuis ATCC 10573]
Length = 540
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/435 (41%), Positives = 267/435 (61%), Gaps = 27/435 (6%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWS K L+EM+E DWR +++FNI KG+KI P+R+W E L ++ +E + +P+
Sbjct: 99 HWSAKSLQEMSESDWRDLKDEFNIITKGTKI-HPIRSWGESVLDKSIVNILETSKFADPT 157
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN----------EA 325
P+Q A+IP+ Q+D+IGIAETGSGKT A+VLP+L YI + EEN
Sbjct: 158 PVQRASIPIATHQQDIIGIAETGSGKTLAYVLPLLHYILSI----EENYLKYEHIQEFNL 213
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
P V++APTRELA QI E +F L + VSI+GG S EE I+ G +++ATP
Sbjct: 214 NKPLGVILAPTRELANQITTELTRFCSALNLTSVSIIGGHSYEETISAIKDGVHIIVATP 273
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRL+D LER+ L++C YV+ DEADRMIDMGFE + + + +P N + + + +LD+
Sbjct: 274 GRLVDSLERKIINLSKCYYVIFDEADRMIDMGFEKPLNTIYENLPEIN-EADRQTFKLDK 332
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE---SEKF 502
R T MF+AT ++ + +KYL PV + IG G+ + I+Q ++ KF
Sbjct: 333 ----RITMMFTATFSDSINTMTKKYLIKPVQLVIGQIGEKVDNINQEFEFIQTKYMDTKF 388
Query: 503 SRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
+L +++++ + + IVF N K + ++ +L + GY+ T+HG KSQ+ RE S++
Sbjct: 389 EKLVQVINKHARRNKVYSIIVFANYIKTVEELSDSLAEKGYKNITIHGSKSQQARERSID 448
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
FR R +LVATDVA RGIDI +V+ V+NY M ++ Y HRIGRTGRAG G + TF+
Sbjct: 449 EFRNGRVRILVATDVAARGIDIANVSLVVNYQMTKRVDEYIHRIGRTGRAGTKGNSYTFI 508
Query: 619 TFHDTDVFYDLKQML 633
D +F DL++ L
Sbjct: 509 EDGDEPLFPDLRRFL 523
>gi|325179839|emb|CCA14242.1| Os08g0159900 putative [Albugo laibachii Nc14]
Length = 1173
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/429 (41%), Positives = 262/429 (61%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
++++++ + + + R I +G PRP+ W++ + L + +++ GY P IQ
Sbjct: 540 REIKDLADDEVQELRSKLEIKVRGKNCPRPLLKWSQCGFSLRLQQLIQKHGYVEPFAIQR 599
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P + RDVIGIA+TGSGKT AF+LPM +I PP+ E EGP ++MAP REL
Sbjct: 600 QALPAIMAGRDVIGIAKTGSGKTLAFLLPMFRHILHQPPL---KEGEGPIGLIMAPAREL 656
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID--CLERRYA 397
AQQI E +FA LG++ ++ GG S+ EQ +++G E+VI TPGR+ID C+
Sbjct: 657 AQQIYVEAKRFAKDLGLRATAVYGGSSVSEQIGNLKRGSEIVICTPGRMIDILCMSAGKV 716
Query: 398 V-LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
V L + +YVVLDEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 717 VSLQRVSYVVLDEADRMFDMGFEPQITKII-----MNIRPD------------RQTLLFS 759
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE-LGDK 515
AT P AVE LARK L PV +T+G A+ I+Q+V + +ES+KF RL +LL G
Sbjct: 760 ATFPRAVETLARKVLLKPVEITVGARSTASGDITQYVEVREESDKFMRLLQLLGYWYGKG 819
Query: 516 TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
+VFVNT++ D + ++L K GY +LHGGK Q R+ +++ F+ + ++VAT VAG
Sbjct: 820 NVLVFVNTQQTCDQIFQDLMKAGYPALSLHGGKDQIDRDYTIDDFKRQVRTLMVATSVAG 879
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+ V+NY P ++E Y HR+GRTGRAG+ G A TF++ + + DL L
Sbjct: 880 RGLDVKDLVLVVNYHCPNHLEDYVHRVGRTGRAGRKGTAYTFISPDEEEYAVDLVNALEH 939
Query: 636 SNSPVPPEL 644
+ VP EL
Sbjct: 940 AKQTVPTEL 948
>gi|367010012|ref|XP_003679507.1| hypothetical protein TDEL_0B01670 [Torulaspora delbrueckii]
gi|359747165|emb|CCE90296.1| hypothetical protein TDEL_0B01670 [Torulaspora delbrueckii]
Length = 579
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 269/442 (60%), Gaps = 27/442 (6%)
Query: 212 RVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE--LLRAVERV 269
R+ + W EK L+EMT+RDWRIFREDF I+ KG I P+RNW E ++ + L V +
Sbjct: 125 RMGKRWQEKTLKEMTDRDWRIFREDFEITTKGGSIENPIRNWHESRILKDDMLDVIVNSL 184
Query: 270 GYKNPSPIQMAAIPLGLQQ--RDVIGIAETGSGKTAAFVLPMLT-YISRLPPISEENEAE 326
YK P+PIQ AIP ++ RD +G+A TGSGKT AFV+P+L IS P E
Sbjct: 185 KYKEPTPIQRIAIPNICKRGSRDFLGVASTGSGKTLAFVIPILIKMISSEPRPPALKSIE 244
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIK-------VVSIVGGQSIEEQGFRIRQGCE 379
GP A+++APTRELAQQI+ E+ K +K VVS+VGG S+EE + +++GC+
Sbjct: 245 GPKALILAPTRELAQQIQAESEKITKLWNVKNPEYSCRVVSVVGGHSLEETTYNLQKGCD 304
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
+++ATPGRLID LE + Q +VLDEADRMID+GFE QV + + + S++
Sbjct: 305 ILVATPGRLIDSLESHILTIKQVETLVLDEADRMIDLGFEEQVTKIFNILESTS------ 358
Query: 440 DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM-KE 498
++ +I + MF+ATM ++ER+A YL+ P TIG + I Q V E
Sbjct: 359 ----EQGKIQK--LMFTATMSGSIERIANGYLQKPSYATIGRGEGSIPQIQQLVYYSGSE 412
Query: 499 SEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISL 557
+F R++ LL++ IVFV KK AD + + ++ +RVT LHG KSQ+QRE SL
Sbjct: 413 ERRFRRVKSLLEQYMPPI-IVFVTYKKTADWLVQKFNQETSFRVTVLHGSKSQDQREHSL 471
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
+ R+ + V++AT+VA RG+DIP+V+ V+N+ + E Y HRIGRTGRAG G A TF
Sbjct: 472 QLLRSGKAQVMIATNVAARGLDIPNVSLVVNFQISKQFEDYIHRIGRTGRAGMKGTAITF 531
Query: 618 LTFHDTDVFYDLKQMLIQSNSP 639
L + + I++N+P
Sbjct: 532 LGDDENTQIVEEISKYIKNNNP 553
>gi|365761412|gb|EHN03069.1| Prp28p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 187/418 (44%), Positives = 256/418 (61%), Gaps = 26/418 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI REDF I KG + PMR+W E + P +LL V ++ +
Sbjct: 3 KHWTEKSLSEMNERDWRILREDFAIVTKGGAVENPMRDWEELNIIPRDLLHIVIHQLQFP 62
Query: 273 NPSPIQMAAIPL---GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP-ISEENEAEGP 328
P+PIQ IP G Q RD +G+A TGSGKT AF++P+L +SR P + +GP
Sbjct: 63 LPTPIQRITIPNVCNGKQYRDFLGVASTGSGKTLAFIMPVLIRMSRSSPRPTSLKIMDGP 122
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI+ E K +VVSIVGG S+EE + + +GC++++
Sbjct: 123 KALILAPTRELVQQIQVEAEKVTKIWSRESNYDCRVVSIVGGHSLEEISYSLSEGCDILV 182
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + S N
Sbjct: 183 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTTILTKVDVSADSATN---- 238
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM-KESEK 501
R T MF+ATM P +E++A Y+R PV TIG + LI Q V E +K
Sbjct: 239 -------RQTLMFTATMTPVIEKIAAGYMRKPVYATIGVDTGSEPLIQQIVEYADNEEQK 291
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + + I+F+N K+ AD +A+ K RVT LHG KSQEQRE SL+ F
Sbjct: 292 FKKLKSIVTKY-EPPIIIFINYKQTADWLAERFQKETNMRVTILHGSKSQEQREHSLQLF 350
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
R+ R V++AT+VA RG+DIP+V+ V+N+ + I+ Y HRIGRTGRA K G A + +
Sbjct: 351 RSGRVQVMIATNVAARGLDIPNVSLVVNFQISKKIDDYIHRIGRTGRAAKKGTAISLV 408
>gi|366989895|ref|XP_003674715.1| hypothetical protein NCAS_0B02570 [Naumovozyma castellii CBS 4309]
gi|342300579|emb|CCC68341.1| hypothetical protein NCAS_0B02570 [Naumovozyma castellii CBS 4309]
Length = 590
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/444 (42%), Positives = 272/444 (61%), Gaps = 29/444 (6%)
Query: 193 AAALKLKEEAADLYDTFDMR-VDRHWSEKKLEEMTERDWRIFREDFNISYKGSK---IPR 248
++ LK AA D +++ + +HW+EK L EMT+RDWRI REDF+I +
Sbjct: 111 SSKLKQLTSAARSKDDIELQYMGKHWTEKSLSEMTDRDWRILREDFHIHITNGNSKSVLN 170
Query: 249 PMRNWAEGKLTPELLRAVER--VGYKNPSPIQMAAIPLGLQ-QRDVIGIAETGSGKTAAF 305
P+RNW E L P+ L + + + + P+P+Q IP ++ RD +G+A TGSGKT AF
Sbjct: 171 PLRNWEELDLIPKKLTNILQRDLKFDFPTPVQRITIPNIVKGNRDFVGVASTGSGKTLAF 230
Query: 306 VLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL----GIKVV 359
VLPMLT + + +PPI+ + + GP +V+ PTRELAQQI+ E K + + IK+
Sbjct: 231 VLPMLTQLLTNGVPPIALK-KMNGPIGLVLVPTRELAQQIQLEAEKVVNLIREEYPIKIE 289
Query: 360 SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
SIVGG S+EE + +GC+++IATPG+LI+CLE V++ +Y+VLDEAD+MID+GFE
Sbjct: 290 SIVGGHSLEEISSNLNEGCDILIATPGKLIECLENHLLVISNLSYLVLDEADKMIDLGFE 349
Query: 420 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
Q+ +L+ NL+ N + +YRT MF+AT+ +E++A YLRNP+ +I
Sbjct: 350 DQLKTILN-----NLEVNNSNVS----SLYRT-LMFTATLSSPLEKIASGYLRNPIYASI 399
Query: 480 GTAGKATELISQHVVMM--KESEKFSRLQRLLDE---LGDKTAIVFVNTKKNADMVAKNL 534
G Q VV + +KF ++ +L E + + I+F+N K AD +A
Sbjct: 400 KAEGADAMPQIQQVVQYCPTDDQKFKAIESILREKNTMDNPRVIIFINYKATADWLANKF 459
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
Y+VT LHG KSQEQRE S++ R+ + +L+AT+VA RG+DIP+VA VIN+ P +
Sbjct: 460 ASTKYKVTILHGSKSQEQREHSIQLLRSGKIQILIATNVAARGLDIPNVALVINFHFPKD 519
Query: 595 IEMYTHRIGRTGRAGKTGVATTFL 618
Y HRIGRTGRAG G A T +
Sbjct: 520 FADYVHRIGRTGRAGNLGTAVTLI 543
>gi|403342187|gb|EJY70406.1| hypothetical protein OXYTRI_08845 [Oxytricha trifallax]
Length = 1227
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/469 (39%), Positives = 277/469 (59%), Gaps = 27/469 (5%)
Query: 187 EEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFRE-DFNISYKGSK 245
E+K E LKL + YD + + + K++ MT+++ + FR+ + +I +G K
Sbjct: 521 EKKRAERQNLKLVNHDNETYDKLNKNL--YIETKEISRMTDKEVQEFRKLNGDIKVRGLK 578
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
P+P+ +W + L +L +ER ++ P PIQ ++P + RDVIGIAETGSGKT A+
Sbjct: 579 CPKPVSSWYQCGLPDGVLEVIERKNFQKPFPIQCQSLPAIMSGRDVIGIAETGSGKTLAY 638
Query: 306 VLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQ 365
VLPM+ +I P+ E EG ++MAPTRELA QI +E+ FA GI+VV + GG
Sbjct: 639 VLPMIRHIRDQRPLEE---GEGMIGLIMAPTRELAFQIYKESKAFAKACGIRVVCVYGGA 695
Query: 366 SIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQV 422
++ Q +++G E+V+ TPGR+ID L + L +C+Y+VLDEADRM+DMGFEPQ+
Sbjct: 696 NVAGQLSELKRGAEIVVCTPGRMIDVLSTSNGKITNLKRCSYIVLDEADRMLDMGFEPQI 755
Query: 423 VGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA 482
V+ N++P+ + MFSAT P +E LA+K L +P+ + +G
Sbjct: 756 SRVM-----QNVRPD------------KQCVMFSATFPRQIENLAKKVLTSPIEIVVGNR 798
Query: 483 GKATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRV 541
G+ + Q V ++ + +KF +L LL E +K +I +FV+ + AD + K L K+GY+
Sbjct: 799 GQTCANVEQFVEVLNQEDKFWKLMELLGEWFEKGSILIFVDKQIEADELFKELYKVGYKA 858
Query: 542 TTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHR 601
LHGG+ Q RE +++ F+ + N++VAT V RG+DI + VINY P + E Y HR
Sbjct: 859 LVLHGGQDQTDREFTIQDFKDRVRNIMVATSVCARGLDIKHMRLVINYMCPNHTEDYVHR 918
Query: 602 IGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEAS 650
+GRTGRAG G A TF+T + DL + L S + VP EL K E S
Sbjct: 919 VGRTGRAGTKGTAYTFITPDECQYATDLIRALENSGNQVPEELKKLEES 967
>gi|167522064|ref|XP_001745370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776328|gb|EDQ89948.1| predicted protein [Monosiga brevicollis MX1]
Length = 498
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/456 (40%), Positives = 269/456 (58%), Gaps = 24/456 (5%)
Query: 196 LKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWA 254
L + + A YD+F R + + MTE + ++ + NI +G ++PRP++ W
Sbjct: 6 LTVPDHAQIQYDSF--RKAFYTEVSDIARMTEEEVDQYKAEMENIKTRGKEVPRPIKTWG 63
Query: 255 EGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYIS 314
+ L+ +L ++++ Y+NP+PIQ AIP+ + RD++GIA+TG GKT AF+LP+L ++
Sbjct: 64 QTGLSKTILAILKQLKYENPTPIQAQAIPVVMSGRDMLGIAKTGCGKTLAFLLPLLRHVM 123
Query: 315 RLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRI 374
++ + G ++M+PTRELA QI ET KF +L ++VV + GG I +Q +
Sbjct: 124 DQRKCAQGEASPGCIGLIMSPTRELALQIYNETRKFCKHLDLRVVCLYGGSDISDQIALL 183
Query: 375 RQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS 431
+ E+++ TPGR+ID L R L +C YV LDEADRM DMGFEPQV +LD
Sbjct: 184 KSAAEIIVCTPGRMIDMLTVNSGRVTNLRRCTYVALDEADRMFDMGFEPQVTRILD---- 239
Query: 432 SNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQ 491
N++P+ R T MFSAT P A+E LARK L PV VT+G + +I Q
Sbjct: 240 -NIRPD------------RQTVMFSATFPRAMEALARKILTKPVEVTVGGRSIVSNIIKQ 286
Query: 492 HVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQ 550
+V++M+E EKF +L LL ++ + IVFV+ ++ AD V +NL K GY LHG SQ
Sbjct: 287 NVIVMREGEKFQKLLELLGHFFEQGSIIVFVHKQEKADSVLENLIKNGYPCLALHGAVSQ 346
Query: 551 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 610
E R +L FR ++VAT +A RG+D+ + V+NYD P + E Y HR GRTGRAG+
Sbjct: 347 EDRASNLRDFRAGNVKIMVATSIAARGLDVKQLCLVVNYDCPNHYEDYVHRCGRTGRAGR 406
Query: 611 TGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
G A TFLT D ++ + L S + VP +L K
Sbjct: 407 EGTAYTFLTADDKKYAGNIIRALHASKAQVPEDLQK 442
>gi|301118572|ref|XP_002907014.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108363|gb|EEY66415.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 2091
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 177/429 (41%), Positives = 267/429 (62%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K+++++++ + R+ + +G PRP++ W + + +L+ +++ GY+ P IQ
Sbjct: 1459 KEIKDLSDEEVEAQRKVAEMKVRGKNCPRPLQKWTQCGFSVRMLQLIKKHGYEEPFAIQK 1518
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P + RDVIGIA+TGSGKT AF+LPM ++ PP+ E EGP ++MAP REL
Sbjct: 1519 QALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHVLAQPPLQEN---EGPIGIIMAPAREL 1575
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID--CLER-RY 396
AQQI E KF+ LG++ ++ GG S+ EQ +++G ++VI TPGR+ID C+ +
Sbjct: 1576 AQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPGRMIDILCMSAGKM 1635
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + YVVLDEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 1636 VSLQRVTYVVLDEADRMFDMGFEPQITKIM-----MNIRPD------------RQTLLFS 1678
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P +VE LARK L+ PV +T+GT A+ I+Q+V + +E +KF RL +LL +K
Sbjct: 1679 ATFPRSVESLARKVLKKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQLLGLWYEKG 1738
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFVN ++ D + ++L K GY +LHGGK Q R+ +++ F+ K V+VAT VAG
Sbjct: 1739 NILVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTVMVATSVAG 1798
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+ VINY P ++E Y HR+GRTGRAG+ G A TF++ + + DL + L
Sbjct: 1799 RGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISPDEEEYSVDLVKALEN 1858
Query: 636 SNSPVPPEL 644
+ +PPEL
Sbjct: 1859 AKQTIPPEL 1867
>gi|367042554|ref|XP_003651657.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
gi|346998919|gb|AEO65321.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
Length = 1193
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 264/437 (60%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E ++L +MTE + R + + I G +PRP++ W++ LT +L +E +GY+ P
Sbjct: 524 WVEPQELSQMTEEEAADLRLELDGIKVSGKNVPRPVQKWSQCGLTRPILDTIEGLGYEKP 583
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P+ + RDVIG+A+TGSGKT AFVLPML +I P+S ++ GP ++M
Sbjct: 584 TPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQDPVSGDD---GPIGLIMT 640
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTREL QI + + F L ++ V+ GG +I++Q +++G E+++ATPGR+ID L
Sbjct: 641 PTRELCTQIYSDLLPFTKALKLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAA 700
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
R L + Y+VLDEADRM DMGFEPQV+ + + N++P+ R
Sbjct: 701 NSGRVTNLKRATYIVLDEADRMFDMGFEPQVMKIFN-----NVRPD------------RQ 743
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K LR PV +T+G I+Q V +++ES+KF RL LL E
Sbjct: 744 TILFSATMPRIIDALTKKVLREPVEITVGGRSVVAPEITQVVEIIEESKKFVRLLELLGE 803
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D A++FV ++ AD + + L + GY ++HGGK QE R ++ F+ +
Sbjct: 804 LYADDDDVRALIFVERQEKADDLLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPI 863
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 864 LIATSVAARGLDVKQLTLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAV 923
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP L
Sbjct: 924 GIAKALEQSGQPVPERL 940
>gi|300120116|emb|CBK19670.2| unnamed protein product [Blastocystis hominis]
Length = 607
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/440 (40%), Positives = 266/440 (60%), Gaps = 24/440 (5%)
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
+R D + + +MT+++ R+ + + +G PRP+ WA+ LT ++L + ++G
Sbjct: 6 IRKDFYVESPLITKMTDKEIDDIRDQWRMKIRGRNYPRPVFTWAQCGLTEKILHVINKLG 65
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYA 330
Y P PIQ AIP + R+VI +A+TGSGKT A++LP+ +I PP+ E +GP
Sbjct: 66 YAKPFPIQSQAIPTVMSGREVIAVAKTGSGKTLAYLLPLFRHILDQPPVVE---GDGPIG 122
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
+++AP REL QI E KF LGI++ ++ GG S+ EQ +++G E+++ TPGR+ID
Sbjct: 123 LILAPARELVAQIYNEASKFCKVLGIRITAVYGGTSMTEQINSLKRGSEIIVCTPGRMID 182
Query: 391 --CLER-RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR 447
CL + R L + +YVVLDEADRM+DMGFEPQ+ +L N +P+
Sbjct: 183 ILCLNQGRLVGLRRVSYVVLDEADRMLDMGFEPQITTIL-----QNARPD---------- 227
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
R MFSAT P VE LARK L+ PV++ +G + +SQ + + + +KF RL +
Sbjct: 228 --RQLVMFSATFPTHVENLARKMLKKPVMIVVGGRTEVAAEVSQTIEVRTKEQKFPRLLQ 285
Query: 508 LLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
+L E D+ I VFV+ ++ AD + ++L + GY LHGG Q+ R+ ++ F+ K
Sbjct: 286 ILGEWYDRGLILVFVDKQQKADYLFRDLLRSGYYSYILHGGMDQQDRDQTIVDFKNKVRT 345
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+L+AT VAGRGI + D+ VINYD P ++E Y HR+GRTGRAG G A TF+T +
Sbjct: 346 ILIATSVAGRGIHVNDLVLVINYDCPNHLEDYVHRVGRTGRAGNKGTAITFITPQEDMYA 405
Query: 627 YDLKQMLIQSNSPVPPELAK 646
D+ + L QS++PVP EL K
Sbjct: 406 SDMVKALKQSHTPVPAELQK 425
>gi|391337071|ref|XP_003742897.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1005
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 260/441 (58%), Gaps = 25/441 (5%)
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
R D + +L +MT + R + I+ KG +P+P++ W + ++ ++L ++++
Sbjct: 295 FRKDFYIEVPELHQMTAAEVEALRAEMEGITVKGKNVPKPIKTWPQAGVSKKVLDVLKKL 354
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
++ P+PIQ A+P + RD+I IA+TGSGKT AF+LPM +I PP+ +GP
Sbjct: 355 NFEKPTPIQCQALPAIMSGRDLIAIAKTGSGKTLAFLLPMFRHIMDQPPL---EATDGPI 411
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
VVM PTRELA QI ++ KFA LG++VV + GG I EQ +++G E+++ TPGR+I
Sbjct: 412 GVVMTPTRELAMQITKDCKKFAKVLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 471
Query: 390 DCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK 446
D L R + +C YVVLDEADRM DMGFEPQV+ ++D++
Sbjct: 472 DMLAANSGRVTNMRRCTYVVLDEADRMFDMGFEPQVMRIIDSV----------------- 514
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQ 506
R R T MFSAT P +E LAR+ L PV + +G + + QHV+++ E +KF +L
Sbjct: 515 RPDRQTVMFSATFPRQMEALARRILLKPVEILVGGRSVVCKEVEQHVLILDEEDKFLKLL 574
Query: 507 RLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
LL + + +AI+FV +++AD + K+L Y LHGG Q R+ ++ F+ ++
Sbjct: 575 ELLGKYAPQGSAIIFVEKQEHADALLKDLMTASYNCNALHGGIDQFDRDSTIVDFKNGKF 634
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVAT VA RG+D+ + V+NYD P + E Y HR GRTGRAG G A TF+T
Sbjct: 635 NVLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPDQERY 694
Query: 626 FYDLKQMLIQSNSPVPPELAK 646
D+ + L S +P+P +L K
Sbjct: 695 AVDILKALEASEAPIPEDLQK 715
>gi|367020544|ref|XP_003659557.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
gi|347006824|gb|AEO54312.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
Length = 993
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 265/437 (60%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E ++L +MTE + R + + I G +P+P++ W++ LT +L +E +GY+ P
Sbjct: 323 WVEPQELSQMTEEEAAELRMELDGIKVSGKNVPKPVQKWSQCGLTRPILDVIEGLGYEKP 382
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P+ + RDVIG+A+TGSGKT AFVLPML +I P+S ++ GP ++M
Sbjct: 383 TPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQDPVSGDD---GPIGLIMT 439
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTREL QI + FA L ++ V+ GG +I++Q +++G E+++ATPGR+ID L
Sbjct: 440 PTRELCTQIYTDLQPFAKALKLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAA 499
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
R L + Y+VLDEADRM DMGFEPQV+ + + N++P+ R
Sbjct: 500 NSGRVTNLKRATYIVLDEADRMFDMGFEPQVMKIFN-----NVRPD------------RQ 542
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K LR+PV +T+G I+Q V +M E++KF RL LL E
Sbjct: 543 TILFSATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQVVEIMDENKKFVRLLELLGE 602
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D A++FV ++ AD + + L + GY ++HGGK QE R ++ F+ +
Sbjct: 603 LYADDDDVRALIFVERQEKADDLLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPI 662
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
++AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 663 MIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPEQENCAP 722
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP +L
Sbjct: 723 GIAKALEQSGQPVPEQL 739
>gi|340992734|gb|EGS23289.1| hypothetical protein CTHT_0009560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1198
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 265/434 (61%), Gaps = 29/434 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E ++L +MTE + R + + I G +P+P++ W++ LT +L +E++G++ P
Sbjct: 541 WVEPQELAQMTEEEVAELRMELDGIKVSGKNVPKPVQKWSQCGLTRPILDTIEKLGFEKP 600
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P+ + RDVIG+A+TGSGKT AFVLPML +I P+S ++ GP +++
Sbjct: 601 TPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQDPVSGDD---GPIGLILT 657
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTREL QI + + F L ++ V+ GG +I++Q +++G E+++ATPGR+ID L
Sbjct: 658 PTRELCTQIYTDLLPFTKVLKLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAA 717
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
R L + Y+VLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 718 NSGRVTNLKRATYIVLDEADRMFDMGFEPQVMKIF-----ANVRPD------------RQ 760
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K LRNPV +T+G I+Q V +++E++KF RL LL E
Sbjct: 761 TILFSATMPRIIDALTKKVLRNPVEITVGGRSVVAPEITQIVEVIEENKKFVRLLELLGE 820
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D A++FV ++ AD + + L + GY ++HGGK QE R ++ F+ +
Sbjct: 821 LYANDDDVRALIFVERQEKADDLLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPI 880
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 881 LIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAS 940
Query: 628 DLKQMLIQSNSPVP 641
+ + L QS PVP
Sbjct: 941 CIAKALEQSGQPVP 954
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 262/434 (60%), Gaps = 25/434 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT + +R + I+ KG P+P++ W + ++ ++L A+++ GY+ P+PIQ
Sbjct: 331 LAKMTTEEVNAYRLELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKHGYEKPTPIQAQ 390
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E +EGP +V+M PTRELA
Sbjct: 391 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEE---SEGPISVIMTPTRELA 447
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 448 LQITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVT 507
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 508 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 550
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ + +G + QHV+++ E +KF +L +L +K +
Sbjct: 551 TFPRAMEALARRILSKPLEIQVGGRSVVCSDVEQHVLVIDEDKKFLKLLEILGHYQEKGS 610
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L K Y +LHGG Q R+ + F+ ++VAT VA R
Sbjct: 611 VIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLMVATSVAAR 670
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY+ P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 671 GLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQVRYAGDIIKALELS 730
Query: 637 NSPVPPELAKHEAS 650
SPVPPEL + AS
Sbjct: 731 GSPVPPELEQLWAS 744
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 259/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT+ + ++R + I+ KG P+P++ W + ++ ++L A+++ GY+ P+PIQ
Sbjct: 342 LAKMTQEEVNVYRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + QHV++++E KF +L LL +K +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+P+PP+L K
Sbjct: 742 GNPIPPDLEK 751
>gi|171680181|ref|XP_001905036.1| hypothetical protein [Podospora anserina S mat+]
gi|170939717|emb|CAP64943.1| unnamed protein product [Podospora anserina S mat+]
Length = 1221
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 180/437 (41%), Positives = 262/437 (59%), Gaps = 29/437 (6%)
Query: 217 WSEK-KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E L +MTE + R + + I G IPRP++ W++ LT +L +E +GY+ P
Sbjct: 544 WVEPLDLSQMTEEEANELRLELDGIKVSGKNIPRPVQKWSQCGLTRPILDTIEGLGYEKP 603
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P+ + RDVIG+A+TGSGKT AF LPML +I P+S ++ GP A++M
Sbjct: 604 TPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHIKDQDPVSGDD---GPIALIMT 660
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTREL QI + + F L ++ V+ GG +I++Q +++G E+++ATPGR+ID L
Sbjct: 661 PTRELCTQIYTDLLPFTKVLKLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAA 720
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
R L + Y+VLDEADRM DMGFEPQV+ + + N++P+ R
Sbjct: 721 NSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFN-----NVRPD------------RQ 763
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K LR+PV +T+G I+Q V ++ ES+KF RL LL E
Sbjct: 764 TILFSATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQVVEIIDESKKFVRLLELLGE 823
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D A++FV ++ D + + L + GY ++HGGK QE R ++ F+ +
Sbjct: 824 LYADDDDVRALIFVERQEKTDDLLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPI 883
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + VINYD+P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 884 LIATSVAARGLDVKQLKLVINYDVPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAP 943
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP L
Sbjct: 944 GVAKALEQSGQPVPERL 960
>gi|15218071|ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 1166
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 268/460 (58%), Gaps = 26/460 (5%)
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
K +A L L + + Y+ F R + + K + MT+ + +R++ + G +PR
Sbjct: 469 KKTKAEKLSLVDHSKIEYEPF--RKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPR 526
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P++ W + LT ++L ++++ Y+ P PIQ A+P+ + RD IG+A+TGSGKT FVLP
Sbjct: 527 PIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLP 586
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
ML +I PP+ +GP +VMAPTREL QQI + KF+ LGI+ V + GG +
Sbjct: 587 MLRHIKDQPPVEA---GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVA 643
Query: 369 EQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
+Q +++G E+V+ TPGR+ID L + L + ++V+DEADRM DMGFEPQ+ +
Sbjct: 644 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 703
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
+ N++PE R T +FSAT P VE LARK L PV + +G
Sbjct: 704 I-----QNIRPE------------RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 746
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTL 544
+ I+Q V + ES++F RL LL E +K I VFV +++ D + +++ K Y +L
Sbjct: 747 NKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSL 806
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK Q RE ++ F+ N+L+AT VA RG+D+ ++ V+N+D P + E Y HR+GR
Sbjct: 807 HGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGR 866
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TGRAG+ G A TF++ D DL + L S PVP +L
Sbjct: 867 TGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 906
>gi|110760457|ref|XP_391829.3| PREDICTED: putative ATP-dependent RNA helicase Pl10 [Apis
mellifera]
Length = 701
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 261/423 (61%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 207 EDIPVEATGDNIPPHITSFDEVKLTEIIKNSISLAGYDKPTPVQKYAIPIIIGRRDVMAC 266
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPISEENEAEG-PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I R PPI+ + + P +V+APTRELA QI +E K
Sbjct: 267 AQTGSGKTAAFLVPILNQIYESGPRPPPINSSGKRKHFPLGLVLAPTRELATQIYDEARK 326
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 327 FAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 386
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 387 ADRMLDMGFEPQIRRIVQEDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 431
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D + +VFV
Sbjct: 432 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPSAESLTLVFV 491
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L ++GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 492 ETKKGADMLEEYLHQMGYPVTSIHGDRTQREREDALRRFRAGKAPILVATAVAARGLDIP 551
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +L+++N +P
Sbjct: 552 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNNKNINLVRDLVSLLVEANQELP 611
Query: 642 PEL 644
P L
Sbjct: 612 PWL 614
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 261/434 (60%), Gaps = 25/434 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT + +R + I KG P+P++ W + ++ ++L A+++ GY P+PIQ
Sbjct: 337 LAKMTTEEVNAYRLELEGIMVKGKGCPKPIKTWVQCGVSMKILSALKKQGYDKPTPIQAQ 396
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E+EGP +V+M PTRELA
Sbjct: 397 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPL---EESEGPISVIMTPTRELA 453
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 454 LQITKECKKFSKALGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVT 513
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 514 NLRRATYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 556
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + QHV++++E +KF +L +L +K +
Sbjct: 557 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVLVIEEDQKFLKLLEILGHYQEKGS 616
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L K Y +LHGG Q R+ + F+ ++VAT VA R
Sbjct: 617 VIIFVDKQEHADGLLKDLMKASYPCLSLHGGIDQYDRDSIINDFKNGVCRLMVATSVAAR 676
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY+ P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 677 GLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQVRYAGDIIKGLELS 736
Query: 637 NSPVPPELAKHEAS 650
+PVPPEL + AS
Sbjct: 737 GAPVPPELEQLWAS 750
>gi|50292537|ref|XP_448701.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661117|sp|Q6FM43.1|PRP28_CANGA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49528013|emb|CAG61664.1| unnamed protein product [Candida glabrata]
Length = 582
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/422 (43%), Positives = 262/422 (62%), Gaps = 34/422 (8%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKG-SKIPRPMRNWAEGKLTP-ELLRAV-ERVGY 271
+ W EK L EM ERDWRI RE+FNI+ KG + P+RNW+E + P +L+RA+ E +G+
Sbjct: 132 KSWREKLLVEMDERDWRIMREEFNITSKGKGAVKHPLRNWSETNVIPTDLVRALTEGMGF 191
Query: 272 KNPSPIQMAAIPLGLQQ-----RDVIGIAETGSGKTAAFVLPMLTYISRLP--PISEENE 324
P+ IQ IP + RD++GIA TGSGKT AF +P+L + LP P++ +
Sbjct: 192 DEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKT- 250
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYL----GIKVVSIVGGQSIEEQGFRIRQGCEV 380
+GP A+V+ PTRELAQQI +E + + VSIVGG S+ + +R GC++
Sbjct: 251 LDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDI 310
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
+IATPGRL+D L+ VLN+ +VLDEADRMID+GFE Q+ +L + + L
Sbjct: 311 LIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAA---- 366
Query: 441 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE-LISQHVVMMKES 499
R T +F+AT+ +VE +A+ YL+NP+ V++G+ + + LI+Q V +
Sbjct: 367 ---------RQTMLFTATLSSSVESIAKGYLKNPLHVSVGSRWDSDKPLITQVVRHTGDD 417
Query: 500 EKFSRLQRLLDEL--GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
+K +L L D+L AI+F+N K+ AD + L + + TLHG KSQ QRE ++
Sbjct: 418 DK--KLSFLKDDLIKNGLPAIIFINYKETADWLTLRLSD-RFNIVTLHGSKSQSQRESAI 474
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
+ ++ NVL+AT+VA RG+DIPDVA V+N+ M + Y HRIGRTGRAGKTG+A T+
Sbjct: 475 QKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTGRAGKTGIAVTY 534
Query: 618 LT 619
LT
Sbjct: 535 LT 536
>gi|380017597|ref|XP_003692739.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
Pl10-like [Apis florea]
Length = 701
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 261/423 (61%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 207 EDIPVEATGDNIPPHITSFDEVKLTEIIKNSIXLAGYDKPTPVQKYAIPIIIGRRDVMAC 266
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPISEENEAEG-PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I R PPI+ + + P +V+APTRELA QI +E K
Sbjct: 267 AQTGSGKTAAFLVPILNQIYESGPRPPPINSSGKRKHFPLGLVLAPTRELATQIYDEARK 326
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 327 FAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 386
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 387 ADRMLDMGFEPQIRRIVQEDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 431
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D + +VFV
Sbjct: 432 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPSAESLTLVFV 491
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L ++GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 492 ETKKGADMLEEYLHQMGYPVTSIHGDRTQREREDALRRFRAGKAPILVATAVAARGLDIP 551
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +L+++N +P
Sbjct: 552 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNNKNINLVRDLVSLLVEANQELP 611
Query: 642 PEL 644
P L
Sbjct: 612 PWL 614
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/434 (41%), Positives = 264/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + + MTE+D +R+ +I G +PRP++ + + +P+L+ A+ + GY+
Sbjct: 189 DFYEEKDSISGMTEQDVTEYRKSLSIRVSGFDVPRPIKTFEDCGFSPQLMNAITKQGYEK 248
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQ A P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P +++E EGP V+
Sbjct: 249 PTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKE---EGPIGVIC 305
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E+ KFA GI+V +I GG S EQ ++ GCE+VIATPGRLID ++
Sbjct: 306 APTRELAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGRLIDMIK 365
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ + + Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T
Sbjct: 366 MKALTMLRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTL 408
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDE 511
+FSATMP VE+LAR+ L +PV VT+G G A E I+Q V V+ ++EK L +L
Sbjct: 409 LFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWLLDKLPGM 468
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ D +VF + K D + L + G ++ LHG K Q R L+ F++ Y+VL+AT
Sbjct: 469 IDDGDVLVFASKKATVDEIESQLGQKGLKIAALHGDKDQASRMDILQKFKSGIYHVLIAT 528
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ +++ + HRIGRTGRAG K G A T +T + +L
Sbjct: 529 DVAARGLDIKSIKSVVNFDIARDMDAHVHRIGRTGRAGDKDGTAYTLITHKEARFAGELV 588
Query: 631 QMLIQSNSPVPPEL 644
LI + VP EL
Sbjct: 589 GSLIAAGQNVPMEL 602
>gi|340719243|ref|XP_003398065.1| PREDICTED: putative ATP-dependent RNA helicase Pl10-like [Bombus
terrestris]
Length = 700
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 260/423 (61%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 207 EDIPVEATGDNIPPHITSFDEVKLTEIIKNSITLAGYDKPTPVQKYAIPIIIGRRDVMAC 266
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPISEENEAEG-PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I R PP + + + P +V+APTRELA QI +E K
Sbjct: 267 AQTGSGKTAAFLVPILNQIYESGPRAPPANTSGKRKHFPLGLVLAPTRELATQIYDEARK 326
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 327 FAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 386
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 387 ADRMLDMGFEPQIRRIVQEDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 431
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D + +VFV
Sbjct: 432 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQAGNYSDSSAESLTLVFV 491
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L ++GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 492 ETKKGADMLEEYLHQMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARGLDIP 551
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +LI++N +P
Sbjct: 552 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNSKNINLVRDLVSLLIEANQELP 611
Query: 642 PEL 644
P L
Sbjct: 612 PWL 614
>gi|350408815|ref|XP_003488524.1| PREDICTED: putative ATP-dependent RNA helicase Pl10-like [Bombus
impatiens]
Length = 700
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 259/423 (61%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 207 EDIPVEATGDNIPPHITSFDEVKLTEIIKNSITLAGYDKPTPVQKYAIPIIIGRRDVMAC 266
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPISEENEAEG-PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I R PP + + + P +V+APTRELA QI +E K
Sbjct: 267 AQTGSGKTAAFLVPILNQIYESGPRAPPANTSGKRKHFPLGLVLAPTRELATQIYDEARK 326
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 327 FAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 386
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 387 ADRMLDMGFEPQIRRIVQEDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 431
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D + +VFV
Sbjct: 432 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQAGNYSDSSAESLTLVFV 491
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L +GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 492 ETKKGADMLEEYLHHMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARGLDIP 551
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +LI++N +P
Sbjct: 552 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNSKNINLVRDLVSLLIEANQELP 611
Query: 642 PEL 644
P L
Sbjct: 612 PWL 614
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/434 (41%), Positives = 264/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + + MTE+D +R+ +I G +PRP++ + + +P+L+ A+ + GY+
Sbjct: 189 DFYEEKDSISGMTEQDVTEYRKSLSIRVSGFDVPRPIKTFEDCGFSPQLMNAITKQGYEK 248
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+PIQ A P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P +++E EGP V+
Sbjct: 249 PTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKE---EGPIGVIC 305
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E+ KFA GI+V +I GG S EQ ++ GCE+VIATPGRLID ++
Sbjct: 306 APTRELAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGRLIDMIK 365
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ + + Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T
Sbjct: 366 MKALTMLRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTL 408
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDE 511
+FSATMP VE+LAR+ L +PV VT+G G A E I+Q V V+ ++EK L +L
Sbjct: 409 LFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVQVIPSDAEKLPWLLDKLPGM 468
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ D +VF + K D + L + G ++ LHG K Q R L+ F++ Y+VL+AT
Sbjct: 469 IDDGDVLVFASKKATVDEIESQLGQKGLKIAALHGDKDQASRMDILQKFKSGIYHVLIAT 528
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ +++ + HRIGRTGRAG K G A T +T + +L
Sbjct: 529 DVAARGLDIKSIKSVVNFDIARDMDAHVHRIGRTGRAGDKDGTAYTLITHKEARFAGELV 588
Query: 631 QMLIQSNSPVPPEL 644
LI + VP EL
Sbjct: 589 GSLIAAGQNVPMEL 602
>gi|307182555|gb|EFN69748.1| ATP-dependent RNA helicase bel [Camponotus floridanus]
Length = 692
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 258/423 (60%), Gaps = 26/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 192 EDIPVEATGENIPPHITSFDEVKLTEIIKNSIALAGYDKPTPVQKYAIPIIIGRRDVMAC 251
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPISEENEA---EGPYAVVMAPTRELAQQIEEET 347
A+TGSGKTAAF++P+L I R PP+ + + P +V+APTRELA QI +E
Sbjct: 252 AQTGSGKTAAFLVPILNQIYESGPRPPPVQANSSGRRKQYPLGLVLAPTRELATQIYDEA 311
Query: 348 VKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
KFA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C Y+VL
Sbjct: 312 RKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVL 371
Query: 408 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
DEADRM+DMGFEPQ+ ++ N+ P E R T MFSAT P ++ LA
Sbjct: 372 DEADRMLDMGFEPQIRRIVQ---EDNMPPTGE----------RQTLMFSATFPKEIQMLA 418
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D + +VFV
Sbjct: 419 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPSAESLTLVFV 478
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L +GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 479 ETKKGADMLEEYLATMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARGLDIP 538
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +LI++N +P
Sbjct: 539 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHNLVRDLVSLLIEANQELP 598
Query: 642 PEL 644
P L
Sbjct: 599 PWL 601
>gi|350408906|ref|XP_003488552.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Bombus
impatiens]
Length = 1030
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 255/425 (60%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + ++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 341 MTSEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 400
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 401 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 457
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 458 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 517
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 518 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 560
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK +AI+
Sbjct: 561 RQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSAII 620
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 621 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 680
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 681 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 740
Query: 640 VPPEL 644
VP L
Sbjct: 741 VPEPL 745
>gi|412990813|emb|CCO18185.1| predicted protein [Bathycoccus prasinos]
Length = 1225
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/456 (39%), Positives = 269/456 (58%), Gaps = 35/456 (7%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ +MT+ + + R + IS +G K+P+P+++W + L+ +++ + R G++NP PIQ
Sbjct: 453 MSKMTKEEVKELRTKLDGISCRGKKVPKPIKSWNQAGLSNKIMELIRRSGFENPMPIQAQ 512
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P+ + RD I +A+TGSGKT A++LPML +I P I +GP A+++ PTREL
Sbjct: 513 ALPIIMSGRDCIAVAKTGSGKTLAYILPMLRHIKDQPEI---KNGDGPIAMIVGPTRELV 569
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E KF +G++ VS+ GG ++ Q +++GCE V TPGR+ID L +
Sbjct: 570 TQIGKECRKFGKTVGVRCVSVYGGSGVQSQITDLKRGCEAVACTPGRMIDILTTGAGKIT 629
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y VLDEADRM DMGFEPQ+ +L +N +P+ R T MFSA
Sbjct: 630 NLRRITYFVLDEADRMFDMGFEPQITRIL-----ANTRPD------------RQTVMFSA 672
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E +AR L NP+ + +G I+Q V + +E ++F R+ LL E ++
Sbjct: 673 TFPRAMENIARAALENPIEIQVGGRSVVNSDITQLVELREEEDRFIRMLELLGEYYEQGK 732
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV ++ D + ++L K GY +LHGGK Q RE ++ F+T NVLVAT VA R
Sbjct: 733 VIIFVASQDKCDTIFRDLLKSGYPCLSLHGGKEQADRECTIVDFKTDVCNVLVATSVAAR 792
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ DV VIN+D P ++E Y HR+GRTGRAG+ G A TF++ + DL + + ++
Sbjct: 793 GLDVKDVKLVINFDCPNHLEDYVHRVGRTGRAGEKGTAVTFISRDEERFAPDLVKAMREA 852
Query: 637 NSPVPPE-LAKHEASKFKPGTIPDRPPRRNDTVFAH 671
PVP + LA EA K R+N+ V A+
Sbjct: 853 KQPVPQDVLALAEAFGNK---------RKNNEVMAN 879
>gi|170039965|ref|XP_001847786.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863566|gb|EDS26949.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 942
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/430 (41%), Positives = 258/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ +MT+ + ++ + I+ KG P+P+R WA +T + + ++G++ P+PIQ
Sbjct: 251 IAKMTQTEVDAYKAELEGINVKGKGCPKPIRTWAHCGVTRKEFEVLRKLGFEKPTPIQCQ 310
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM ++ PP+ EAEGP A++M+PTREL
Sbjct: 311 AIPAVMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPL---EEAEGPIAIIMSPTRELC 367
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KFA L ++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 368 MQIGKDIKKFAKSLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 427
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 428 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NIRPD------------RQTVMFSA 470
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ PV + +G + + QHVV+++E KF +L LL ELG
Sbjct: 471 TFPRQMEALARRILKKPVEIQVGGRSVVCKEVEQHVVVLEEDAKFFKLLELLGLYQELG- 529
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ K+L K Y +LHGG Q R+ ++ F+ R +L+AT VA
Sbjct: 530 -SIIVFVDKQENADILLKDLMKASYPCMSLHGGIDQFDRDSTIIDFKQGRVKLLIATSVA 588
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ + V+NYD P + E Y HR GRTGRAG G A TFLT D+ + L
Sbjct: 589 ARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTHEQGRYSGDIIRALE 648
Query: 635 QSNSPVPPEL 644
S +P +L
Sbjct: 649 LSGGTIPDDL 658
>gi|168017610|ref|XP_001761340.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687346|gb|EDQ73729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 589
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 255/422 (60%), Gaps = 22/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G+ +P P+ +AE L P L + R Y P+P+Q AIP+ L RD++
Sbjct: 125 EDIPVETSGNNVPPPVNTFAEIDLGPALNENIRRCKYTKPTPVQRYAIPISLHGRDLMAC 184
Query: 295 AETGSGKTAAFVLPMLTYISRLPPI--SEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P++ I R P S P A++++PTREL+ QI +E KFA+
Sbjct: 185 AQTGSGKTAAFCFPIIAGIMRNTPPGRSRGGRKALPLALILSPTRELSCQISDEAKKFAY 244
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
GIKVV GG + Q + +G ++++ATPGRL D LER L+ Y+ LDEADR
Sbjct: 245 QTGIKVVVCYGGAPVHNQLREMERGVDILVATPGRLSDLLERARVSLSMVRYLALDEADR 304
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++RLA +L
Sbjct: 305 MLDMGFEPQIRRIVEQM---DMPPAGE----------RQTMLFSATFPREIQRLASDFLS 351
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRL------QRLLDELGDKT-AIVFVNTKK 525
N + + +G G +TELI Q V +++S+K S L Q L G ++ +VFV TKK
Sbjct: 352 NYIFLAVGRVGSSTELIVQRVEYVQDSDKRSMLMDLIHAQSALAPPGQQSLTLVFVETKK 411
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L ++G+ TT+HG +SQ++RE +L FRT +LVATDVA RG+DIP VAH
Sbjct: 412 GADSLEDWLCRMGFPATTIHGDRSQQEREHALRSFRTGVTPILVATDVAARGLDIPHVAH 471
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+GVAT F D + L +++ +S+ VP L
Sbjct: 472 VVNFDLPSDIDDYVHRIGRTGRAGKSGVATAFFNEKDQSLARSLAELMTESSQEVPGWLT 531
Query: 646 KH 647
+
Sbjct: 532 NY 533
>gi|363739175|ref|XP_414629.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Gallus
gallus]
Length = 1028
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT+ + ++R + I+ KG P+P++ W + ++ ++L A+++ GY+ P+PIQ
Sbjct: 339 LAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQ 398
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 399 AIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEE---GEGPIAVIMTPTRELA 455
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 456 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT 515
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 516 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 558
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + QHV++++E KF +L LL +K +
Sbjct: 559 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGS 618
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 619 VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 678
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 679 GLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELS 738
Query: 637 NSPVPPELAK 646
+P+P +L K
Sbjct: 739 GNPIPADLEK 748
>gi|326928709|ref|XP_003210518.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Meleagris gallopavo]
Length = 1027
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT+ + ++R + I+ KG P+P++ W + ++ ++L A+++ GY+ P+PIQ
Sbjct: 338 LAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQ 397
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 398 AIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEE---GEGPIAVIMTPTRELA 454
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 455 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT 514
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 515 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 557
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + QHV++++E KF +L LL +K +
Sbjct: 558 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGS 617
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 618 VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 677
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 678 GLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELS 737
Query: 637 NSPVPPELAK 646
+P+P +L K
Sbjct: 738 GNPIPADLEK 747
>gi|340724160|ref|XP_003400452.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46-like [Bombus terrestris]
Length = 1030
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 255/425 (60%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + ++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 341 MTSEEVDAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 400
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 401 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 457
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 458 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 517
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 518 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 560
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK +AI+
Sbjct: 561 RQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSAII 620
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 621 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 680
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 681 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 740
Query: 640 VPPEL 644
VP L
Sbjct: 741 VPEPL 745
>gi|307202910|gb|EFN82130.1| Probable ATP-dependent RNA helicase DDX46 [Harpegnathos saltator]
Length = 1034
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/400 (42%), Positives = 248/400 (62%), Gaps = 25/400 (6%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + I++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 345 MTPEEVEIYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 404
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 405 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 461
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 462 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 521
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 522 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 564
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK +AI+
Sbjct: 565 RQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSAII 624
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 625 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 684
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
+ + V+NYD P + E Y HR GRTGRAG G A TF+T
Sbjct: 685 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT 724
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/446 (40%), Positives = 267/446 (59%), Gaps = 27/446 (6%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+T+ R + + +L +MT+ + +R + I+ KG P+P++ W + ++ ++L
Sbjct: 326 YETY--RKNFYVEVPELAKMTQEEVTSYRLEMEGITVKGKGCPKPIKTWVQCGISMKILN 383
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
++++ GY+ P+PIQ AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E
Sbjct: 384 SLKKHGYEKPTPIQAQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEE--- 440
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP AV+M PTRELA QI +E KF+ LG++VV + GG I EQ +++G E+++ T
Sbjct: 441 GEGPIAVIMTPTRELALQITKECKKFSKTLGVRVVCVYGGTGISEQIAELKRGAEIIVCT 500
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ ++D N++P+
Sbjct: 501 PGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD---- 551
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T MFSAT P A+E LAR+ L P+ V +G + Q+V++++E K
Sbjct: 552 --------RQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQNVIVIEEENK 603
Query: 502 FSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
F +L LL ++ A I+FV+ +++AD + K+L + Y +LHGG Q R+ + F
Sbjct: 604 FLKLLELLGHFQEQGAVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDF 663
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
++ +LVAT VA RG+D+ + VINY P + E Y HR GRTGRAG G A TF+T
Sbjct: 664 KSGVCKLLVATSVAARGLDVKHLMLVINYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 723
Query: 621 HDTDVFYDLKQMLIQSNSPVPPELAK 646
D+ + L S +PVP EL K
Sbjct: 724 DQARYAGDIIKALELSGTPVPSELEK 749
>gi|332031410|gb|EGI70923.1| Putative ATP-dependent RNA helicase DDX46 [Acromyrmex echinatior]
Length = 1013
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 255/425 (60%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + +++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 324 MTPEEVEVYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 383
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 384 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 440
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 441 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 500
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 501 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 543
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK + I+
Sbjct: 544 RQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSTII 603
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 604 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 663
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 664 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 723
Query: 640 VPPEL 644
VP L
Sbjct: 724 VPEPL 728
>gi|42573778|ref|NP_974985.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
gi|108861888|sp|Q8W4R3.2|RH30_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 30
gi|110741550|dbj|BAE98724.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010323|gb|AED97706.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
Length = 591
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/426 (41%), Positives = 266/426 (62%), Gaps = 22/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ MTE+D ++R + +IS +G +P+PM+ + + +L A+ ++G+ P+PIQ
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIAETGSGKT A++LP L ++S P + ++ +GP +++APTRELA
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQD---DGPIVLILAPTRELAV 252
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI+EE+ KF G++ I GG Q +R+G E+VIATPGRLID LE ++ L +
Sbjct: 253 QIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKR 312
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T ++SAT P
Sbjct: 313 VTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLLWSATWPR 355
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++LR+P IG+ KA + I+Q + ++ EK++RL LL +L D + I +
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV TK+ D V + L G+ +HG K+Q +R+ L F++ R ++ ATDVA RG+D
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ V+NYD P +E Y HRIGRTGRAG G+A TF T + +L ++L ++
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535
Query: 640 VPPELA 645
VPP L+
Sbjct: 536 VPPTLS 541
>gi|332028827|gb|EGI68856.1| ATP-dependent RNA helicase bel [Acromyrmex echinatior]
Length = 704
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 260/423 (61%), Gaps = 26/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ +++RDV+
Sbjct: 197 EDIPVEATGENIPPHITSFDEVKLTEIIKNSIALAGYDKPTPVQKYAIPIIIERRDVMAC 256
Query: 295 AETGSGKTAAFVLPMLTYISRL---PPISEENEA----EGPYAVVMAPTRELAQQIEEET 347
A+TGSGKTAAF++P+L I PP + N + + P +V+APTRELA QI +E
Sbjct: 257 AQTGSGKTAAFLVPILNQIYESGPRPPPPQANSSGRRKQYPLGLVLAPTRELATQIYDEA 316
Query: 348 VKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
KFA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C ++VL
Sbjct: 317 RKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRFLVL 376
Query: 408 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
DEADRM+DMGFEPQ+ ++ N+ P E R T MFSAT P ++ LA
Sbjct: 377 DEADRMLDMGFEPQIRRIVQ---EDNMPPTGE----------RQTLMFSATFPKEIQMLA 423
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL--DELGDKTA----IVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D TA +VFV
Sbjct: 424 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPTAESLTLVFV 483
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L +GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 484 ETKKGADMLEEYLASMGYPVTSIHGDRTQREREEALRRFRAGKAPILVATAVAARGLDIP 543
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +LI++N +P
Sbjct: 544 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHNLVRDLVSLLIEANQELP 603
Query: 642 PEL 644
P L
Sbjct: 604 PWL 606
>gi|225456912|ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
vinifera]
Length = 611
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/427 (41%), Positives = 264/427 (61%), Gaps = 22/427 (5%)
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
++ M+E++ ++R I+ +G +P+P+R++ E L + ++G+ P+PIQ
Sbjct: 159 SVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLGFVEPTPIQAQ 218
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
P+ L+ RD+IGIAETGSGKT A++LP L ++S PP+ EGP +V+APTRELA
Sbjct: 219 GWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVR---GEGPIVLVLAPTRELA 275
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI+EE +KF + I+ I GG Q +++G E+VIATPGRLID LE ++ L
Sbjct: 276 VQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQHTNLR 335
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P
Sbjct: 336 RVTYLVLDEADRMLDMGFEPQIRKII-----SQIRPD------------RQTLYWSATWP 378
Query: 461 PAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI- 518
VE LAR++LRNP V IG+ KA + I Q V ++ E+EK++RL RLL E+ D + I
Sbjct: 379 REVETLARQFLRNPYKVIIGSQDLKANQSIQQVVEVVTETEKYNRLIRLLKEVMDGSRIL 438
Query: 519 VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGI 578
+F+ TKK D V + + G+ ++HG K+Q +R+ L F++ R ++ ATDVA RG+
Sbjct: 439 IFMETKKGCDQVTRQMRMDGWPSLSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGL 498
Query: 579 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
D+ D+ VINYD P ++E Y HRIGRTGRAG G A TF T + DL ++L ++
Sbjct: 499 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 558
Query: 639 PVPPELA 645
V P L+
Sbjct: 559 VVSPALS 565
>gi|427794033|gb|JAA62468.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1111
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 260/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT + R + I +G P+P+RNWA+ ++ ++L +++ G++ P+PIQ
Sbjct: 385 LAKMTPGEVETLRAELEGIKVRGKGCPKPIRNWAQCGVSKKVLELLKKHGFEKPTPIQAQ 444
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ +++ GP AV+M PTRELA
Sbjct: 445 AIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEDDD---GPIAVIMTPTRELA 501
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KF LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 502 MQITKDCKKFTKSLGLRVVCVYGGTGISEQIADLKRGAEIIVCTPGRMIDMLAANNGRVT 561
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
+ YVVLDEADRM DMGFEPQV+ ++D+ ++P+ R T MFSA
Sbjct: 562 NFRRTTYVVLDEADRMFDMGFEPQVMRIIDS-----IRPD------------RQTVMFSA 604
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LAR+ L P+ + +G + + QHVV++ + EKF +L LL DK +
Sbjct: 605 TFPRQMEALARRILIKPIEILVGGRSVVCKDVEQHVVILTQEEKFFKLLELLGLYQDKGS 664
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
AIVFV+ +++AD++ K+L K + LHGG Q R+ ++ F+ + VL+AT VA R
Sbjct: 665 AIVFVDKQEHADILLKDLMKASHNAMALHGGIDQFDRDSTIVDFKAGKVGVLIATSVAAR 724
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+N+D P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 725 GLDVKHLILVVNFDCPNHYEDYVHRCGRTGRAGNKGYAYTFITEDQGRYTADVIKALELS 784
Query: 637 NSPVPPELAK 646
+P+P +L K
Sbjct: 785 GNPIPEDLQK 794
>gi|391335132|ref|XP_003741951.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1171
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 272/458 (59%), Gaps = 28/458 (6%)
Query: 197 KLKEEAADLYD--TFD-MRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRN 252
K+K++ +D TF R D + +L +MT + R + I+ KG +P+P++
Sbjct: 450 KIKKQTTITFDDITFQPFRKDFYIEVPELAQMTPAEVEALRAEMEGITVKGKNVPKPIKT 509
Query: 253 WAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTY 312
W + ++ +L ++++ ++ P+PIQ A+P + RD+I IA+TGSGKT AF+LPM +
Sbjct: 510 WPQAGISKRVLDVLKKLNFEKPTPIQCQALPAIMTGRDLIAIAKTGSGKTIAFLLPMFRH 569
Query: 313 ISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGF 372
I PP+ +GP VV+ PTRELA QI ++ KFA LG++VV + GG I EQ
Sbjct: 570 IMDQPPL---EATDGPIGVVLTPTRELAMQITKDCRKFAKALGLRVVCVYGGTGISEQIA 626
Query: 373 RIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
+++G E++I TPGR+ID L R + +C YVVLDEADRM DMGFEPQV+ ++D+
Sbjct: 627 ELKRGAEIIICTPGRMIDMLAANSGRVTNMRRCTYVVLDEADRMFDMGFEPQVMRIIDS- 685
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
++P+ R T MFSAT P +E LAR+ L P+ + +G + +
Sbjct: 686 ----VRPD------------RQTVMFSATFPRQMEALARRILIKPIEILVGGRSVVCKEV 729
Query: 490 SQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
Q+V+++ E +KF +L +L + G + +AI+FV+ +++AD + K+L Y + LHGG
Sbjct: 730 EQYVLIVSEEDKFLKLLEVLGKYGAQGSAIIFVDKQEHADALLKDLMTASYNCSVLHGGI 789
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
Q R+ ++ F+ ++NVLVAT VA RG+D+ + V+NYD P + E Y HR GRTGRA
Sbjct: 790 DQFDRDSTIVDFKNGKFNVLVATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRA 849
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
G G A TF+T D+ + L S + +P +L K
Sbjct: 850 GNKGFAYTFITPEQERYSVDILRALEASEATIPEDLQK 887
>gi|10177293|dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 564
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/426 (41%), Positives = 266/426 (62%), Gaps = 22/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ MTE+D ++R + +IS +G +P+PM+ + + +L A+ ++G+ P+PIQ
Sbjct: 109 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 168
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIAETGSGKT A++LP L ++S P + ++ +GP +++APTRELA
Sbjct: 169 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQD---DGPIVLILAPTRELAV 225
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI+EE+ KF G++ I GG Q +R+G E+VIATPGRLID LE ++ L +
Sbjct: 226 QIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKR 285
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T ++SAT P
Sbjct: 286 VTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLLWSATWPR 328
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++LR+P IG+ KA + I+Q + ++ EK++RL LL +L D + I +
Sbjct: 329 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 388
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV TK+ D V + L G+ +HG K+Q +R+ L F++ R ++ ATDVA RG+D
Sbjct: 389 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 448
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ V+NYD P +E Y HRIGRTGRAG G+A TF T + +L ++L ++
Sbjct: 449 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 508
Query: 640 VPPELA 645
VPP L+
Sbjct: 509 VPPTLS 514
>gi|241618030|ref|XP_002408280.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215502947|gb|EEC12441.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1025
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/428 (40%), Positives = 260/428 (60%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT + ++R + I +G P+P+RNWA+ ++ +++ +++ G++ P+PIQ
Sbjct: 319 LAKMTPGEVELWRAEMEGIKVRGKGCPKPIRNWAQCGVSKKVMEVLKKHGFEKPTPIQAQ 378
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ +++ GP AV+M PTRELA
Sbjct: 379 AIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEDDD---GPIAVIMTPTRELA 435
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KF L ++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 436 MQITKDCKKFTKSLSLRVVCVYGGTGISEQIADLKRGAEIIVCTPGRMIDMLAANNGRVT 495
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
+ YVVLDEADRM DMGFEPQV+ ++D+ ++P+ R T MFSA
Sbjct: 496 NFRRTTYVVLDEADRMFDMGFEPQVMRIVDS-----VRPD------------RQTVMFSA 538
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LAR+ L P+ + +G + + QH+V++ + +KF +L LL DK +
Sbjct: 539 TFPRQMEALARRILMKPIEILVGGRSVVCKEVEQHIVIINDEDKFFKLLELLGLYQDKGS 598
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
AIVFV+ +++AD++ K+L K + LHGG Q R+ ++ F+ + VL+AT VA R
Sbjct: 599 AIVFVDKQEHADVLLKDLMKASHNAMALHGGIDQFDRDSTIVDFKAGKVGVLIATSVAAR 658
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NYD P + E Y HR GRTGRAG G A TF+T DL + L S
Sbjct: 659 GLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITDDQGRYAADLSKALELS 718
Query: 637 NSPVPPEL 644
+PVP +L
Sbjct: 719 GNPVPEDL 726
>gi|195130219|ref|XP_002009550.1| GI15175 [Drosophila mojavensis]
gi|193908000|gb|EDW06867.1| GI15175 [Drosophila mojavensis]
Length = 1229
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 260/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT + +R + I KG P+P++ WA+ ++ + + + ++G++ P+PIQ
Sbjct: 503 LARMTSSEVEKYRSELEGIQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQ 562
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 563 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPAL---EDGDGAIAIIMAPTRELC 619
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 620 MQIGKDIRKFSRSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 679
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 680 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 722
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ PV V +G + + QHVV++ + KF +L LL E G
Sbjct: 723 TFPRQMEALARRILKKPVEVIVGGRSVVCKDVEQHVVILSDEAKFFKLLELLGVYQETG- 781
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 782 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 840
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAG G A TF+T + D+ + L
Sbjct: 841 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGCAFTFITPEQSRYAGDVIRALE 900
Query: 635 QSNSPVPPEL 644
S +PVPP+L
Sbjct: 901 LSGTPVPPDL 910
>gi|336464722|gb|EGO52962.1| hypothetical protein NEUTE1DRAFT_150386 [Neurospora tetrasperma
FGSC 2508]
Length = 1193
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 266/450 (59%), Gaps = 31/450 (6%)
Query: 206 YDTFDMRVDRH--WSEK-KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D+ R W E +L M+E + R + + I G IP+P++ W++ LT
Sbjct: 511 YSKLDLNPIRKNFWVEPYELSHMSEGELAELRLELDGIKVSGKNIPKPVQKWSQCGLTRP 570
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
+L +E +G++ P+PIQM A+P+ + RDVIG+A+TGSGKT AF LPML ++ P++
Sbjct: 571 ILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKDQDPVTG 630
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
++ G A++M PTREL QI + FA L ++VV+ GG +I++Q +++G E++
Sbjct: 631 DD---GAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAELKRGAEII 687
Query: 382 IATPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ATPGRLID L R L + Y+VLDEADRM DMGFEPQV+ + + N++P+
Sbjct: 688 VATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFN-----NVRPD- 741
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
R T +FSATMP ++ L +K LR+PV +T+G I+Q V +M E
Sbjct: 742 -----------RQTILFSATMPRIIDALTKKVLRDPVEITVGGRSVVAPEITQIVEVMDE 790
Query: 499 SEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
+KF+RL LL EL D +++FV ++ AD + + L + GY ++HGGK QE R
Sbjct: 791 GKKFNRLLELLGELYADDDDVRSLIFVERQEKADDLLRELLRRGYGCMSIHGGKDQEDRN 850
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F+ +L+AT +A RG+D+ + VINYD P ++E Y HR GRTGRAG TG A
Sbjct: 851 STISDFKKGVCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTA 910
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TF+T + + + L QS PVP L
Sbjct: 911 VTFITEEQENCASGIAKALEQSGQPVPDRL 940
>gi|328786029|ref|XP_001122722.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
mellifera]
Length = 1030
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 255/425 (60%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + ++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 341 MTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 400
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 401 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 457
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 458 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 517
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 518 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 560
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK +AI+
Sbjct: 561 RQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSAII 620
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 621 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 680
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 681 VKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 740
Query: 640 VPPEL 644
VP L
Sbjct: 741 VPEPL 745
>gi|224284362|gb|ACN39916.1| unknown [Picea sitchensis]
Length = 593
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 181/423 (42%), Positives = 262/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
+++ + +R+ I+ +G +P+P+R++ E T +LR +ER G+ P+ IQ P+
Sbjct: 144 LSDHEVSAYRKRREITVEGRDVPKPLRSFREASFTDHVLRELERAGFSEPTAIQAQGWPM 203
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +I+ P ++ +GP +V+APTRELA QI+
Sbjct: 204 ALKGRDLIGIAETGSGKTLAYLLPAIVHINAQPHLAH---GDGPIVLVLAPTRELAVQIQ 260
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E+VKF IK I GG Q +++G E+VIATPGRLID LE R+ L + Y
Sbjct: 261 QESVKFGTSSKIKSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEARHTNLRRVTY 320
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T +SAT P VE
Sbjct: 321 LVLDEADRMLDMGFEPQIRKII-----TQIRPD------------RQTLYWSATWPREVE 363
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
LAR++L NP V IG+A KA ISQ V ++ E EK+ RL +LL+E+ D + I +F+
Sbjct: 364 NLARQFLHNPYKVIIGSADLKANHAISQIVEVVSEYEKYPRLIKLLEEIMDGSRILIFME 423
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D V K L G+ ++HG KSQ +R+ L F+ + ++ ATDVA RG+D+ D
Sbjct: 424 TKKGCDQVTKQLRMDGWPALSIHGDKSQAERDWVLGEFKAGKSPIMTATDVAARGLDVKD 483
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
+ VINYD PG++E Y HRIGRTGRAG G A +F T + +L +L ++ V P
Sbjct: 484 IKCVINYDFPGSLEDYVHRIGRTGRAGAKGTAYSFFTAANGRFARELVGILQEAGQRVNP 543
Query: 643 ELA 645
ELA
Sbjct: 544 ELA 546
>gi|307189252|gb|EFN73695.1| Probable ATP-dependent RNA helicase DDX46 [Camponotus floridanus]
Length = 1028
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 255/425 (60%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + +++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 339 MTPEEVEMYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 398
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 399 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 455
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 456 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 515
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 516 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 558
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK + I+
Sbjct: 559 RQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSIII 618
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 619 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 678
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 679 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 738
Query: 640 VPPEL 644
VP L
Sbjct: 739 VPEPL 743
>gi|383854537|ref|XP_003702777.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Megachile rotundata]
Length = 1035
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 254/425 (59%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + ++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 346 MTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 405
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 406 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 462
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 463 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 522
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 523 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 565
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK + I+
Sbjct: 566 RQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSTII 625
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 626 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 685
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 686 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 745
Query: 640 VPPEL 644
VP L
Sbjct: 746 VPEPL 750
>gi|365985163|ref|XP_003669414.1| hypothetical protein NDAI_0C05120 [Naumovozyma dairenensis CBS 421]
gi|343768182|emb|CCD24171.1| hypothetical protein NDAI_0C05120 [Naumovozyma dairenensis CBS 421]
Length = 628
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/430 (41%), Positives = 255/430 (59%), Gaps = 39/430 (9%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKG---SKIPRPMRNWAEGKLTPELLR--AVERV 269
+HW EK L EMT RDWRI REDFNI+ K S I P+RNW E KL P +L + ++
Sbjct: 165 KHWKEKSLSEMTPRDWRILREDFNITIKSGDSSSIKSPLRNWDELKLLPPILDDILINKL 224
Query: 270 GYKNPSPIQMAAIPLGLQQ--RDVIGIAETGSGKTAAFVLPMLTYISRL--PPISEENEA 325
+K+P+PIQ IP L Q RD IG+A TGSGKT AF+LP+L + PI+ + +
Sbjct: 225 NFKDPTPIQRITIPNILLQNDRDFIGVASTGSGKTLAFILPILIKLLETGDKPINLK-KI 283
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYL----GIKVVSIVGGQSIEEQGFRIRQ-GCEV 380
+GP ++++ PTRELAQQI+ E K +L SIVGG S+EE + + C++
Sbjct: 284 DGPMSLILVPTRELAQQIQSEADKIISFLRPSYNFNTCSIVGGYSLEEISRNLNEKACDL 343
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
+IATPG+LI+CLE + + +++VLDEAD+MID+GFE Q+ +L+ + N+
Sbjct: 344 LIATPGKLIECLENHILTIQKISFLVLDEADKMIDLGFEDQLKSILNQIKIENV------ 397
Query: 441 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL--ISQHV-VMMK 497
L +I MF+ATM +E++AR YL P+ I G + + I Q +
Sbjct: 398 --LTNYKIL----MFTATMSTPIEKIARGYLNQPINAIINADGSKSSIPQIRQIIEYCPS 451
Query: 498 ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL---------DKLGYRVTTLHGGK 548
E +++ ++ LL ++ I+F+N K AD +A + ++ T LHG K
Sbjct: 452 EEQRYQKIVSLLKSHPNELVIIFINYKSTADWLANKFQNERTSYSSSRSAFKCTVLHGSK 511
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
SQEQRE SL+ R+ R +L+AT+VA RG+DIP+V V N+ M E Y HRIGRTGRA
Sbjct: 512 SQEQREHSLQLLRSHRVQILIATNVAARGLDIPNVTTVFNFQMSKTFEDYVHRIGRTGRA 571
Query: 609 GKTGVATTFL 618
G TG+A T+L
Sbjct: 572 GNTGLAITYL 581
>gi|281207583|gb|EFA81766.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 802
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 266/427 (62%), Gaps = 21/427 (4%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
+++L MT+++ +R +++ G+ IP+P+ +++ P +++ + G+ P+ IQ
Sbjct: 366 DEELASMTDQEVEQYRTSADMTVFGTNIPKPILTFSQSHFPPYIMKEIVAAGFAAPTAIQ 425
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
+ P+ L+ RD+IG+AETGSGKT AF+LP + +I+ P + E N+ GP +V+APTRE
Sbjct: 426 AQSWPVALKGRDMIGLAETGSGKTLAFLLPGVVHINAQPFL-EPND--GPIMLVLAPTRE 482
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAV 398
LA QI+ E KF IK ++ GG +Q ++R G E+VIATPGRLID LE R
Sbjct: 483 LAMQIQAECDKFGSSSKIKNCAVYGGVPKFQQTSQLRSGVEIVIATPGRLIDLLETRKTN 542
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
L + Y+VLDEADRM+DMGFE Q+ +L S ++P+ R T MFSAT
Sbjct: 543 LKRVTYLVLDEADRMLDMGFEDQIRKIL-----SQIRPD------------RQTLMFSAT 585
Query: 459 MPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
P V+ LA +L++P+ + IG+A A + Q + + ++++K RL L+++GD+
Sbjct: 586 WPKVVQSLANDFLKDPIQIKIGSAELSANHNVKQIIEICEKNDKQQRLFSFLEKVGDEKC 645
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
I+F+ TK +++ +N+ G++ +HG K+Q +R+ SL+ F+ +L+ATDVA RG
Sbjct: 646 IIFMETKNGVNLLQRNMQVAGFKCAGIHGDKTQGERDYSLQQFKKSGIQMLIATDVASRG 705
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+D+ D+ +VINYD P IE Y HRIGRTGRAG TG A T T +D + +L +LI++N
Sbjct: 706 LDVKDIKYVINYDFPNTIESYIHRIGRTGRAGATGTAFTLFTTNDMRLAGELITVLIEAN 765
Query: 638 SPVPPEL 644
VPP L
Sbjct: 766 QYVPPSL 772
>gi|224065635|ref|XP_002301895.1| predicted protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| predicted protein [Populus trichocarpa]
Length = 1112
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 250/429 (58%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ MT + R++ + G +P+P++ W + LT ++L ++++ Y+ P IQ
Sbjct: 441 KEISRMTPEEVVACRKELELKLHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQA 500
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML +I PP+ EGP +VMAPTREL
Sbjct: 501 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEA---GEGPIGLVMAPTREL 557
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RY 396
QQI + KFA L I+ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 558 VQQIHSDIKKFAKALSIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKI 617
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 618 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPD------------RQTVLFS 660
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + E +++ RL LL E K
Sbjct: 661 ATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVELRTEDQRWLRLLELLGEWYQKG 720
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I +FV ++ D + +NL K GY +LHG K Q RE ++ F+T N+++AT VA
Sbjct: 721 KILIFVQSQDKCDSLFRNLLKFGYPCLSLHGAKDQTDRESTISDFKTNVCNLMIATSVAA 780
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+ VINYD P + E Y HR+GRTGRAG+ G A TF++ D DL + L
Sbjct: 781 RGLDVKDLELVINYDAPNHYEDYVHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALEL 840
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 841 SEQVVPQDL 849
>gi|225579808|gb|ACN94086.1| unknown [Drosophila melanogaster]
Length = 1198
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|225579799|gb|ACN94078.1| unknown [Drosophila melanogaster]
Length = 1195
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|408391854|gb|EKJ71221.1| hypothetical protein FPSE_08584 [Fusarium pseudograminearum CS3096]
Length = 1192
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 256/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L V+ +GY+ P
Sbjct: 526 WHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKP 585
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P + RDVIG+A+TGSGKT AF+LPM +I PP+ + +GP ++M
Sbjct: 586 TPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPL---KDTDGPIGLIMT 642
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI ++ F +G++ V GG I EQ +++G E+++ TPGR+ID L
Sbjct: 643 PTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAA 702
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 703 NQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD------------RQ 745
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NP+ VT+G + I Q V + E KF R+ LL E
Sbjct: 746 TILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGE 805
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ ++FV ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 806 LYDRDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPI 865
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 866 LIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAP 925
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS P+P L
Sbjct: 926 GIAKALEQSGQPIPDRL 942
>gi|225579790|gb|ACN94070.1| unknown [Drosophila melanogaster]
Length = 1198
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|225579817|gb|ACN94094.1| unknown [Drosophila melanogaster]
Length = 1227
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 483 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 542
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 543 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 599
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 600 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 659
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 660 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 702
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 703 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 761
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 762 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 820
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 821 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 880
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 881 LSGTLIPAEL 890
>gi|225579772|gb|ACN94054.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|225579763|gb|ACN94046.1| unknown [Drosophila melanogaster]
gi|225579781|gb|ACN94062.1| unknown [Drosophila melanogaster]
gi|225579826|gb|ACN94102.1| unknown [Drosophila melanogaster]
gi|225579835|gb|ACN94110.1| unknown [Drosophila melanogaster]
gi|225579853|gb|ACN94126.1| unknown [Drosophila melanogaster]
gi|225579862|gb|ACN94134.1| unknown [Drosophila melanogaster]
gi|225579889|gb|ACN94158.1| unknown [Drosophila melanogaster]
gi|225579898|gb|ACN94166.1| unknown [Drosophila melanogaster]
gi|225579916|gb|ACN94182.1| unknown [Drosophila melanogaster]
gi|225579934|gb|ACN94198.1| unknown [Drosophila melanogaster]
gi|225579952|gb|ACN94214.1| unknown [Drosophila melanogaster]
gi|225579961|gb|ACN94222.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|193683325|ref|XP_001948746.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Acyrthosiphon pisum]
Length = 985
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 256/428 (59%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ MT + ++E+ + KG PRP++ WA ++ +++ +++ Y+ P+PIQ
Sbjct: 283 ISRMTSEEIEKYKEELEGVRVKGKGCPRPIKVWAHCGVSKKIMDNLKKHNYEKPTPIQTQ 342
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ + +GP A+VMAPTREL
Sbjct: 343 AIPAIMAGRDLIGIAKTGSGKTLAFLLPMFRHIMDQPPLED---TDGPIAIVMAPTRELC 399
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
Q +E KF LG++VVS+ GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 400 MQTGKEARKFTKSLGLRVVSVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT 459
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ V+D N++P+ R T MFSA
Sbjct: 460 NLRRVTYVVLDEADRMFDMGFEPQVMRVID-----NVRPD------------RQTVMFSA 502
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LAR+ L+ PV V IG + + QHV++++E +KF +L +L ++ +
Sbjct: 503 TFPRQMEALARRILQKPVEVQIGGRSVVAKEVEQHVIIVEEEQKFMKLLEVLGVYYERGS 562
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFV+T +NAD + + L K Y +LHG Q R+ ++ F++ + +LVAT VA R
Sbjct: 563 CIVFVDTHENADTLLQKLLKASYPCMSLHGAIDQYDRDSTIVDFKSGQIKLLVATSVAAR 622
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ D+ V+NYD P + E Y HR GRTGRAG G A T ++ DL + L S
Sbjct: 623 GLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTLVSPDQERFAGDLIRALETS 682
Query: 637 NSPVPPEL 644
N PVP L
Sbjct: 683 NVPVPESL 690
>gi|24642151|ref|NP_573020.2| CG6227 [Drosophila melanogaster]
gi|7293060|gb|AAF48446.1| CG6227 [Drosophila melanogaster]
gi|54650792|gb|AAV36975.1| LD41277p [Drosophila melanogaster]
gi|220951960|gb|ACL88523.1| CG6227-PA [synthetic construct]
gi|225579871|gb|ACN94142.1| unknown [Drosophila melanogaster]
gi|225579880|gb|ACN94150.1| unknown [Drosophila melanogaster]
gi|225579907|gb|ACN94174.1| unknown [Drosophila melanogaster]
gi|225579925|gb|ACN94190.1| unknown [Drosophila melanogaster]
gi|225579943|gb|ACN94206.1| unknown [Drosophila melanogaster]
gi|225579970|gb|ACN94230.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|46108284|ref|XP_381200.1| hypothetical protein FG01024.1 [Gibberella zeae PH-1]
Length = 1227
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 256/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L V+ +GY+ P
Sbjct: 561 WHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKP 620
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P + RDVIG+A+TGSGKT AF+LPM +I PP+ + +GP ++M
Sbjct: 621 TPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPL---KDTDGPIGLIMT 677
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI ++ F +G++ V GG I EQ +++G E+++ TPGR+ID L
Sbjct: 678 PTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAA 737
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 738 NQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD------------RQ 780
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NP+ VT+G + I Q V + E KF R+ LL E
Sbjct: 781 TILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGE 840
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ ++FV ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 841 LYDRDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPI 900
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 901 LIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAP 960
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS P+P L
Sbjct: 961 GIAKALEQSGQPIPDRL 977
>gi|145323964|ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 828
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 268/460 (58%), Gaps = 26/460 (5%)
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
K +A L L + + Y+ F R + + K + MT+ + +R++ + G +PR
Sbjct: 131 KKTKAEKLSLVDHSKIEYEPF--RKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPR 188
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P++ W + LT ++L ++++ Y+ P PIQ A+P+ + RD IG+A+TGSGKT FVLP
Sbjct: 189 PIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLP 248
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
ML +I PP+ +GP +VMAPTREL QQI + KF+ LGI+ V + GG +
Sbjct: 249 MLRHIKDQPPV---EAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVA 305
Query: 369 EQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
+Q +++G E+V+ TPGR+ID L + L + ++V+DEADRM DMGFEPQ+ +
Sbjct: 306 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 365
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
+ N++PE R T +FSAT P VE LARK L PV + +G
Sbjct: 366 I-----QNIRPE------------RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 408
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTL 544
+ I+Q V + ES++F RL LL E +K I VFV +++ D + +++ K Y +L
Sbjct: 409 NKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSL 468
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK Q RE ++ F+ N+L+AT VA RG+D+ ++ V+N+D P + E Y HR+GR
Sbjct: 469 HGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGR 528
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TGRAG+ G A TF++ D DL + L S PVP +L
Sbjct: 529 TGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 568
>gi|410516921|sp|Q4IP34.2|PRP5_GIBZE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Length = 1207
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 256/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L V+ +GY+ P
Sbjct: 541 WHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKP 600
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P + RDVIG+A+TGSGKT AF+LPM +I PP+ + +GP ++M
Sbjct: 601 TPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPL---KDTDGPIGLIMT 657
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI ++ F +G++ V GG I EQ +++G E+++ TPGR+ID L
Sbjct: 658 PTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAA 717
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 718 NQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD------------RQ 760
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NP+ VT+G + I Q V + E KF R+ LL E
Sbjct: 761 TILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGE 820
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ ++FV ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 821 LYDRDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPI 880
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 881 LIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAP 940
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS P+P L
Sbjct: 941 GIAKALEQSGQPIPDRL 957
>gi|225579844|gb|ACN94118.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 480 LTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 539
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 540 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 596
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 597 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 656
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 657 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 699
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 700 TFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELLGIYQEAG- 758
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 759 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 817
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 818 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 877
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 878 LSGTLIPAEL 887
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 180/434 (41%), Positives = 264/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + M+E+D +R+ I G ++P+P++ + + P+++ A+++ GY+
Sbjct: 194 DFYEESPSISGMSEQDVIDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMGAIKKQGYEK 253
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP V+
Sbjct: 254 PTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVIC 310
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E KFA GI+V ++ GG S EQ ++ GCE+V+ATPGRLID L+
Sbjct: 311 APTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLK 370
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ + + Y+VLDEADRM D+GFEPQV ++ ++P+ R T
Sbjct: 371 MKALAMLRATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTL 413
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDEL 512
+FSATMP VE+LAR+ L +P+ VT+G G A E I+Q V V+ +SEK L L E+
Sbjct: 414 LFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEM 473
Query: 513 GDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D+ +VF + K D + L + G++V LHG K Q R L+ F++ Y+VL+AT
Sbjct: 474 IDQGDTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQKFKSGAYHVLIAT 533
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T + +L
Sbjct: 534 DVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELV 593
Query: 631 QMLIQSNSPVPPEL 644
L+ + V EL
Sbjct: 594 NSLVAAGQNVSTEL 607
>gi|297845068|ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
gi|297336257|gb|EFH66674.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
Length = 827
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 269/460 (58%), Gaps = 26/460 (5%)
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
K +A L L + + Y+ F R + + K + MT+ + +R++ + G +PR
Sbjct: 131 KKTKAEKLSLVDHSKIEYEPF--RKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPR 188
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P++ W + LT ++L ++++ Y+ P PIQ A+P+ + RD IG+A+TGSGKT FVLP
Sbjct: 189 PIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLP 248
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
ML +I PP+ +GP +VMAPTREL QQI + KF+ LGI+ V + GG +
Sbjct: 249 MLRHIKDQPPVEA---GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVA 305
Query: 369 EQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
+Q +++G E+V+ TPGR+ID L + L + ++V+DEADRM DMGFEPQ+ +
Sbjct: 306 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 365
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
+ N++PE R T +FSAT P VE LARK L PV + +G
Sbjct: 366 I-----QNIRPE------------RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 408
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTL 544
+ I+Q V + ES++F RL LL E +K I VFV +++ D + +++ K Y +L
Sbjct: 409 NKDITQLVEVRPESDRFFRLLELLGEWYEKGKILVFVQSQEKCDALYRDMIKSSYPCLSL 468
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK Q RE ++ F++ N+L+AT VA RG+D+ ++ V+N+D P + E Y HR+GR
Sbjct: 469 HGGKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGR 528
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TGRAG+ G A TF++ D DL + L S PVP +L
Sbjct: 529 TGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 568
>gi|168042111|ref|XP_001773533.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675235|gb|EDQ61733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 600
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 180/422 (42%), Positives = 255/422 (60%), Gaps = 22/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G+ IP P+ +AE L P L + R Y P+P+Q AIP+ L RD++
Sbjct: 129 EDIPVETSGNNIPPPVNTFAEIDLGPALNENIRRCKYTKPTPVQKYAIPISLHGRDLMAC 188
Query: 295 AETGSGKTAAFVLPMLTYISR-LPPISEENEAEG-PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P++ I R PP + P A++++PTREL+ QI +E KFA+
Sbjct: 189 AQTGSGKTAAFCFPIIAGIMRNTPPGRPRGGRKALPLALILSPTRELSCQISDEAKKFAY 248
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
GI+VV GG + Q + +G ++++ATPGRL D LER L+ Y+ LDEADR
Sbjct: 249 QTGIRVVVAYGGAPVHNQLREMERGVDILVATPGRLSDLLERARVSLSMVRYLALDEADR 308
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++RLA +L
Sbjct: 309 MLDMGFEPQIRRIVEQM---DMPPAGE----------RQTMLFSATFPREIQRLASDFLS 355
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRL------QRLLDELGDKT-AIVFVNTKK 525
N + + +G G +T+LI Q V +++ +K S L Q L G +T +VFV TKK
Sbjct: 356 NYIFLAVGRVGSSTDLIVQRVEYVQDVDKRSMLMDLIHAQSALAPPGQQTLTLVFVETKK 415
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L +LG+ TT+HG +SQ++RE +L FRT +LVATDVA RG+DIP VAH
Sbjct: 416 GADALEDWLCRLGFPATTIHGDRSQQEREHALRSFRTGVTPILVATDVAARGLDIPHVAH 475
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+GVAT F D + L +++ +SN VP L
Sbjct: 476 VVNFDLPSDIDDYVHRIGRTGRAGKSGVATAFFNEKDQALARPLTELMTESNQEVPGWLT 535
Query: 646 KH 647
+
Sbjct: 536 NY 537
>gi|297797303|ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
gi|297312371|gb|EFH42795.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 174/426 (40%), Positives = 266/426 (62%), Gaps = 22/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ MTE+D ++R + +IS +G +P+P++ + + +L A+ ++G+ P+PIQ
Sbjct: 133 VQAMTEQDVAMYRTERDISVEGRDVPKPVKLFQDANFPDNILEAIAKLGFTEPTPIQAQG 192
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIAETGSGKT A++LP L ++S P + ++ +GP +++APTRELA
Sbjct: 193 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQD---DGPIVLILAPTRELAV 249
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI+EE+ KF G++ I GG Q +R+G E+VIATPGRLID LE ++ L +
Sbjct: 250 QIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKR 309
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T ++SAT P
Sbjct: 310 VTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLLWSATWPR 352
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++LR+P IG+ KA + I+Q + ++ EK++RL LL +L D + I +
Sbjct: 353 EVESLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 412
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV TK+ D V + L G+ +HG K+Q +R+ L F++ R ++ ATDVA RG+D
Sbjct: 413 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQPERDRVLAEFKSGRSPIMTATDVAARGLD 472
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ V+NYD P +E Y HRIGRTGRAG G+A TF T + +L ++L ++
Sbjct: 473 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELIKILQEAGQV 532
Query: 640 VPPELA 645
VPP L+
Sbjct: 533 VPPTLS 538
>gi|168052555|ref|XP_001778715.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669930|gb|EDQ56508.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 579
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 178/422 (42%), Positives = 256/422 (60%), Gaps = 22/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G+ +P P+ +AE L P L + R Y P+P+Q AIP+ L RD++
Sbjct: 114 EDIPVETSGNNVPPPVNTFAEIDLGPALNENIRRCKYTKPTPVQKYAIPISLHGRDLMAC 173
Query: 295 AETGSGKTAAFVLPMLTYISR-LPPISEENEAEG-PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P++ I R PP + P A++++PTREL+ QI +E KFA+
Sbjct: 174 AQTGSGKTAAFCFPIIAGIMRNTPPGRPRGGRKALPLALILSPTRELSCQISDEAKKFAY 233
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
GI+VV GG + Q + +G ++++ATPGRL D LER L+ Y+ LDEADR
Sbjct: 234 QTGIRVVVAYGGAPVHNQLREMERGVDILVATPGRLSDLLERARVSLSMVRYLALDEADR 293
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++RLA +L
Sbjct: 294 MLDMGFEPQIRRIVEQM---DMPPAGE----------RQTMLFSATFPREIQRLASDFLS 340
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRL------QRLLDELGDKT-AIVFVNTKK 525
N + + +G G +T+LI Q V +++++K S L Q L G +T +VFV TKK
Sbjct: 341 NYIFLAVGRVGSSTDLIVQRVEFVQDADKRSMLMDLIHAQSALAPPGQQTLTLVFVETKK 400
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L ++G+ TT+HG +SQ++RE +L FRT +LVATDVA RG+DIP VAH
Sbjct: 401 GADSLEDWLCRMGFPATTIHGDRSQQEREHALRSFRTGVTPILVATDVAARGLDIPHVAH 460
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+GVAT F D + L +++ +SN VP L
Sbjct: 461 VVNFDLPSDIDDYVHRIGRTGRAGKSGVATAFFNEKDQSLARPLSELMTESNQEVPGWLL 520
Query: 646 KH 647
+
Sbjct: 521 NY 522
>gi|443704392|gb|ELU01455.1| hypothetical protein CAPTEDRAFT_148841 [Capitella teleta]
Length = 580
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 281/499 (56%), Gaps = 43/499 (8%)
Query: 163 REQKKLAAKN----EKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWS 218
R +K+ A+N EK+++EE + E V EK A + + E A + + + W
Sbjct: 51 RLKKEAEARNVSEREKQLKEEQKILESVAEK---TALMGVAELAKGI--QYQESIQTGWQ 105
Query: 219 E-KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPI 277
K +++M E R +I +G +P P++ + E K LL ++++G K P+PI
Sbjct: 106 PPKHIQDMPESRHNRVRRKHHILVEGESLPAPIKTFKEMKFPKPLLSCLKKMGIKAPTPI 165
Query: 278 QMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVM 333
Q+ IP L RD+IGIA TGSGKT F LP++ + RLP I +E GPY +++
Sbjct: 166 QIQGIPTVLSGRDMIGIAFTGSGKTIVFTLPLMMFCLEQEKRLPFIRDE----GPYGLII 221
Query: 334 APTRELAQQIEEETVKFAHYL------GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P+RELA+Q + V + Y+ I+ +GG +++EQ I +G V++ATPGR
Sbjct: 222 CPSRELARQTNDIIVSISQYMENEGFPAIRSGLCIGGVAVKEQMDVIHKGVHVLVATPGR 281
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR 447
L+D L ++ L+ C Y+ +DEADRMIDMGFE V +
Sbjct: 282 LMDMLAKKMINLDVCRYLCMDEADRMIDMGFEEDVRTIFSYFKGQ--------------- 326
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
R T +FSATMP ++ AR L +PV V +G AG A+ I Q V +K+ EK +L
Sbjct: 327 --RQTLLFSATMPKKIQNFARSALVHPVTVNVGRAGAASLAIIQEVEYLKQEEKMVQLLH 384
Query: 508 LLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L ++F K++ D + + L G ++HGGK QE+R +S++ FR K+ +V
Sbjct: 385 ALQRT-PPPVLIFSEKKQDVDAIHEYLLLKGVEAVSIHGGKDQEERTLSVQQFRAKQKDV 443
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH-DTDVF 626
LVATDVA +G+D P++ HVINYDMP +IE Y HRIGRTGR GKTG+ATTF+ + D +
Sbjct: 444 LVATDVASKGLDFPEIHHVINYDMPDDIENYVHRIGRTGRRGKTGIATTFVNKNCDESIL 503
Query: 627 YDLKQMLIQSNSPVPPELA 645
DLK +LI+S +PP LA
Sbjct: 504 LDLKHLLIESKQKIPPFLA 522
>gi|47221754|emb|CAG08808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 258/428 (60%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ D +R + I KG P+P++ W + ++ ++L A+++ Y+ P+PIQ
Sbjct: 313 LAKMSQEDVNAYRLELEGIIVKGKGCPKPIKTWVQCGVSMKILSALKKHTYEKPTPIQAQ 372
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E+EGP AV+M PTRELA
Sbjct: 373 AIPAVMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPL---EESEGPIAVIMTPTRELA 429
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 430 LQITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVT 489
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D+ ++P+ R T MFSA
Sbjct: 490 NLRRVTYVVLDEADRMFDMGFEPQVMRIVDS-----VRPD------------RQTVMFSA 532
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + QHV++++E KF +L LL ++ +
Sbjct: 533 TFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQHVLVIEEDNKFLKLLELLGHYQERGS 592
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L K Y +LHGG Q R+ + F++ ++VAT VA R
Sbjct: 593 VIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKSGACRLMVATSVAAR 652
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY+ P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 653 GLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYAGDIIKALELS 712
Query: 637 NSPVPPEL 644
S VPPEL
Sbjct: 713 GSSVPPEL 720
>gi|383847715|ref|XP_003699498.1| PREDICTED: putative ATP-dependent RNA helicase an3-like [Megachile
rotundata]
Length = 711
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 177/425 (41%), Positives = 260/425 (61%), Gaps = 30/425 (7%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 217 EDIPVEATGDNIPPHITSFDEVKLTEIIKNSITLAGYDKPTPVQKYAIPIIIGRRDVMAC 276
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPI---SEENEAEGPYAVVMAPTRELAQQIEEET 347
A+TGSGKTAAF++P+L I R PP+ S + P +V+APTRELA QI +E
Sbjct: 277 AQTGSGKTAAFLVPILNQIYESGPRPPPVHGTSSGKRKQYPLGLVLAPTRELATQIYDEA 336
Query: 348 VKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
KFA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C ++VL
Sbjct: 337 RKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRFLVL 396
Query: 408 DEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
DEADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++
Sbjct: 397 DEADRMLDMGFEPQIRRIVQEDTMP-----PTGE----------RQTLMFSATFPKEIQM 441
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIV 519
LAR +L N + + +G G +E I+Q +V ++E +K S L LL D + +V
Sbjct: 442 LARDFLSNYIFLAVGRVGSTSENITQKIVWVEEQDKRSYLLDLLQASNFSDPSAESLTLV 501
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV TKK ADM+ + L ++GY VT++HG ++Q +RE +L FR + +LVAT VA RG+D
Sbjct: 502 FVETKKGADMLEEYLHQMGYPVTSIHGDRTQREREDALRRFRAGKAPILVATAVAARGLD 561
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
IP V HVIN+D+PG++E Y HRIGRTGR G G+AT+F ++++ DL +L+++N
Sbjct: 562 IPHVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNNKNSNLVRDLVSLLLEANQE 621
Query: 640 VPPEL 644
+P L
Sbjct: 622 LPHWL 626
>gi|336272585|ref|XP_003351049.1| hypothetical protein SMAC_04353 [Sordaria macrospora k-hell]
gi|380090816|emb|CCC04986.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1190
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 251/414 (60%), Gaps = 27/414 (6%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I G IP+P++ W++ LT +L +E +GY+ P+PIQM A+P+ + RDVIG+A+T
Sbjct: 542 GIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGYEKPTPIQMQALPVIMSGRDVIGVAKT 601
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF LP+L ++ P++ ++ G A++M PTREL QI + FA L ++
Sbjct: 602 GSGKTMAFALPLLRHVKDQDPVTGDD---GAIALIMTPTRELCTQIYSDLQPFAKALKLR 658
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
VV+ GG +I++Q +++G E+++ATPGRLID L R L + Y+VLDEADRM
Sbjct: 659 VVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMF 718
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ + + N++P+ R T +FSATMP ++ L +K LR+P
Sbjct: 719 DMGFEPQVMKIFN-----NVRPD------------RQTILFSATMPRIIDSLTKKVLRDP 761
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMV 530
V +T+G I+Q V +M E +KF+RL LL EL D +++FV ++ AD +
Sbjct: 762 VEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGELYADDDDVRSLIFVERQEKADDL 821
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L + GY ++HGGK QE R ++ F+ +L+AT +A RG+D+ + VINYD
Sbjct: 822 LRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINYD 881
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P ++E Y HR GRTGRAG TG A TF+T + + + L QS PVP L
Sbjct: 882 APNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRL 935
>gi|350296822|gb|EGZ77799.1| Pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Neurospora
tetrasperma FGSC 2509]
Length = 1195
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 251/414 (60%), Gaps = 27/414 (6%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I G IP+P++ W++ LT +L +E +G++ P+PIQM A+P+ + RDVIG+A+T
Sbjct: 549 GIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKT 608
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF LPML ++ P++ ++ G A++M PTREL QI + FA L ++
Sbjct: 609 GSGKTMAFALPMLRHVKDQDPVTGDD---GAIALIMTPTRELCTQIYSDLQPFAKALKLR 665
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
VV+ GG +I++Q +++G E+++ATPGRLID L R L + Y+VLDEADRM
Sbjct: 666 VVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMF 725
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ + + N++P+ R T +FSATMP ++ L +K LR+P
Sbjct: 726 DMGFEPQVMKIFN-----NVRPD------------RQTILFSATMPRIIDALTKKVLRDP 768
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMV 530
V +T+G I+Q V +M E +KF+RL LL EL D +++FV ++ AD +
Sbjct: 769 VEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGELYADDDDVRSLIFVERQEKADDL 828
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L + GY ++HGGK QE R ++ F+ +L+AT +A RG+D+ + VINYD
Sbjct: 829 LRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINYD 888
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P ++E Y HR GRTGRAG TG A TF+T + + + L QS PVP L
Sbjct: 889 APNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRL 942
>gi|85118552|ref|XP_965469.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|74662807|sp|Q7SH33.1|PRP5_NEUCR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp-5
gi|28927278|gb|EAA36233.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|38567223|emb|CAE76515.1| related to RNA helicase [Neurospora crassa]
Length = 1194
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 251/414 (60%), Gaps = 27/414 (6%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I G IP+P++ W++ LT +L +E +G++ P+PIQM A+P+ + RDVIG+A+T
Sbjct: 548 GIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKT 607
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF LPML ++ P++ ++ G A++M PTREL QI + FA L ++
Sbjct: 608 GSGKTMAFALPMLRHVKDQDPVTGDD---GAIALIMTPTRELCTQIYSDLQPFAKALKLR 664
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
VV+ GG +I++Q +++G E+++ATPGRLID L R L + Y+VLDEADRM
Sbjct: 665 VVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMF 724
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ + + N++P+ R T +FSATMP ++ L +K LR+P
Sbjct: 725 DMGFEPQVMKIFN-----NVRPD------------RQTILFSATMPRIIDALTKKVLRDP 767
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMV 530
V +T+G I+Q V +M E +KF+RL LL EL D +++FV ++ AD +
Sbjct: 768 VEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGELYADDDDVRSLIFVERQEKADDL 827
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L + GY ++HGGK QE R ++ F+ +L+AT +A RG+D+ + VINYD
Sbjct: 828 LRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINYD 887
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P ++E Y HR GRTGRAG TG A TF+T + + + L QS PVP L
Sbjct: 888 APNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRL 941
>gi|322794838|gb|EFZ17785.1| hypothetical protein SINV_13785 [Solenopsis invicta]
Length = 586
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/423 (41%), Positives = 259/423 (61%), Gaps = 26/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ +++RDV+
Sbjct: 153 EDIPVEATGEVIPPHITSFDEVKLTEIIKNSIALAGYDKPTPVQKYAIPIIIERRDVMAC 212
Query: 295 AETGSGKTAAFVLPMLTYISRL---PPISEENEA----EGPYAVVMAPTRELAQQIEEET 347
A+TGSGKTAAF++P+L I PP + N + + P +V+APTRELA QI +E
Sbjct: 213 AQTGSGKTAAFLVPILNQIYESGPRPPPPQANSSSRRKQYPLGLVLAPTRELATQIYDEA 272
Query: 348 VKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
KFA+ ++ + GG +I +Q + +GC +++ATPGRL+D L R L+ C ++VL
Sbjct: 273 RKFAYRSRMRPAVVYGGSNIVDQMRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRFLVL 332
Query: 408 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
DEADRM+DMGFEPQ+ ++ N+ P E R T MFSAT P ++ LA
Sbjct: 333 DEADRMLDMGFEPQIRRIVQ---EDNMPPTGE----------RQTLMFSATFPKEIQMLA 379
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL--DELGDKTA----IVFV 521
R +L N + + +G G +E I+Q +V ++E +K S L LL D TA +VFV
Sbjct: 380 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQASNFSDPTAESLTLVFV 439
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L +GY VT++HG ++Q +RE +L FR + +LVAT VA RG+DIP
Sbjct: 440 ETKKGADMLEEYLASMGYPVTSIHGDRTQREREDALRRFRAGKAPILVATAVAARGLDIP 499
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +LI++N +P
Sbjct: 500 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHNLVRDLVSLLIEANQELP 559
Query: 642 PEL 644
L
Sbjct: 560 SWL 562
>gi|194894625|ref|XP_001978097.1| GG17877 [Drosophila erecta]
gi|190649746|gb|EDV47024.1| GG17877 [Drosophila erecta]
Length = 1222
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 479 LSRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMDVLRRLGFEKPTPIQCQ 538
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 539 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSL---EDGDGAIAIIMAPTRELC 595
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 596 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 655
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 656 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 698
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + Q+VV++ + KF +L LL E G
Sbjct: 699 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQNVVILNDDAKFFKLLELLGIYQEAG- 757
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 758 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 816
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + L
Sbjct: 817 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRALD 876
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 877 LSGTLIPSEL 886
>gi|116207046|ref|XP_001229332.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
gi|118597490|sp|Q2HAD8.1|PRP5_CHAGB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|88183413|gb|EAQ90881.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
Length = 1064
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 262/437 (59%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E ++L +MTE D R + + I G +P+P++ W++ LT +L VE +GY+ P
Sbjct: 393 WVEPQELSQMTEDDIADLRLELDGIKVSGKNVPKPVQKWSQCGLTRPILDVVEGLGYEKP 452
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+ IQM A+P+ + RDVIG+A+TGSGKT AFVLPML +I P++ ++ G A++M
Sbjct: 453 TSIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQDPVTGDD---GAIALIMT 509
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTREL QI + + FA L ++ ++ GG +I++Q +++G E+++ATPGR+ID L
Sbjct: 510 PTRELCTQIYSDLLPFAKALKLRAIAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAA 569
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
R L + Y+VLDEADRM DMGFEPQV+ + + N++P+ R
Sbjct: 570 NSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFN-----NVRPD------------RQ 612
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K LR PV + +G I+Q V ++ E +KF RL LL E
Sbjct: 613 TILFSATMPRIIDALTKKVLREPVEIQVGGRSVVAPEITQIVEILDEGKKFVRLLELLGE 672
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D A++FV ++ AD + + + + GY ++HGGK QE R ++ F+ +
Sbjct: 673 LYADDDDVRALIFVERQEKADDLLREVLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPI 732
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
++AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 733 MIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAP 792
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP +L
Sbjct: 793 GIAKALEQSGQPVPEQL 809
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 252/424 (59%), Gaps = 24/424 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT + +R+ + G +P+P++ W + LT ++L ++++ Y+ P PIQ A+P+
Sbjct: 473 MTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDTIKKLNYERPMPIQAQALPI 532
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
+ RD IGIA+TGSGKT AFVLPML +I PP+ +GP ++MAPTREL QQI
Sbjct: 533 IMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVMP---GDGPIGLIMAPTRELVQQIH 589
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQ 401
+ KFA +GI V + GG + +Q +++G EVV+ TPGR+ID L + L +
Sbjct: 590 SDIKKFAKVVGISCVPVYGGSGVAQQISELKRGAEVVVCTPGRMIDILCTSGGKITNLRR 649
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+V+DEADRM DMGFEPQ+ ++ N +P+ R T +FSAT P
Sbjct: 650 VTYLVMDEADRMFDMGFEPQITRIV-----QNTRPD------------RQTVLFSATFPR 692
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VF 520
VE LAR+ L PV + +G + ISQ V + ESE+F RL LL E +K I +F
Sbjct: 693 QVEILARRVLNKPVEIQVGGRSVVNKDISQLVEVRPESERFFRLLELLGEWYEKGKILIF 752
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
V++++ D + ++L K GY +LHG K Q RE ++ F++ N+L+AT VA RG+D+
Sbjct: 753 VHSQEKCDSLFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDV 812
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
++ VIN+D+P + E Y HR+GRTGRAG+ G A TF++ D DL + L S V
Sbjct: 813 KELELVINFDVPNHYEDYVHRVGRTGRAGRKGSAITFISDDDARYAPDLVKALELSEQVV 872
Query: 641 PPEL 644
P +L
Sbjct: 873 PDDL 876
>gi|345482984|ref|XP_001603634.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Nasonia
vitripennis]
Length = 1039
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 254/425 (59%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + +++E+ I KG P+P+++WA+ ++ + L + ++GY+ P+PIQ AIP
Sbjct: 347 MTPEEVELYKEELEGIRVKGKNCPKPIKSWAQCGVSKKELDVLRKLGYEKPTPIQCQAIP 406
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 407 AIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 463
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLN 400
+++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 464 GKDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLR 523
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 524 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 566
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV++ + KF +L +L DK +AI+
Sbjct: 567 RQMEALARRILTKPVEVQVGGRSVVCKDVEQHVVVLDDDLKFRKLLEILGHFQDKGSAII 626
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K + +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 627 FVDKQENADTLLKDLMKASHSCMSLHGGIDQCDRDSTIMDFKAGRVKLLVATSVAARGLD 686
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 687 VKSLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITPDQERYSGDIVRAFELAGVP 746
Query: 640 VPPEL 644
VP L
Sbjct: 747 VPEPL 751
>gi|195478796|ref|XP_002100656.1| GE17181 [Drosophila yakuba]
gi|194188180|gb|EDX01764.1| GE17181 [Drosophila yakuba]
Length = 1215
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 472 LSRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMDVLRRLGFEKPTPIQCQ 531
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 532 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSL---EDGDGAIAIIMAPTRELC 588
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 589 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 648
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 649 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 691
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + Q+VV++ + KF +L LL E G
Sbjct: 692 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQNVVILNDDAKFFKLLELLGIYQEAG- 750
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 751 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 809
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + L
Sbjct: 810 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRALD 869
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 870 LSGTLIPAEL 879
>gi|260802690|ref|XP_002596225.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
gi|229281479|gb|EEN52237.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
Length = 924
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 265/444 (59%), Gaps = 27/444 (6%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLR 264
YD F R D + +L++++E + + R + ++ KG P+P+ +W + ++ ++L
Sbjct: 193 YDPF--RKDFYVEVPELQKLSEDEVKAMRAEMEDVRVKGKGCPKPVLHWVQSGVSKKVLA 250
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+++ G++ P+PIQ AIP+ + RD+IGIA+TGSGKT AF++PM +I P+ +
Sbjct: 251 CLKKHGFEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHILDQRPLED--- 307
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP V+M PTRELA QI +E KF ++ +KVV + GG I EQ +++G E++I T
Sbjct: 308 TEGPIGVIMTPTRELALQITKECKKFTRHMNLKVVCVYGGTGISEQIAELKRGAEIIICT 367
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L +C Y+VLDEADRM DMGFEPQV+ ++++ ++P+
Sbjct: 368 PGRMIDMLAANNGRVTNLRRCTYLVLDEADRMFDMGFEPQVMHIVNS-----VRPD---- 418
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T MFSAT P +E LARK L+ P+ V +G + QHV++++E +K
Sbjct: 419 --------RQTVMFSATFPRNMEALARKVLQKPIEVQVGGRSVVCSDVEQHVIVLEEEQK 470
Query: 502 FSRLQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
F +L LL +K + +VFV ++ AD + K+L K Y +LHGG Q R+ + F
Sbjct: 471 FFKLLELLGNYQEKGSVLVFVERQEVADTLLKDLLKAAYSCLSLHGGIDQYDRDSIINDF 530
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
++ +LVAT VA RG+D+ + VINYD P + E Y HR+GRTGRAG G A TF+T
Sbjct: 531 KSGNIRLLVATSVAARGLDVKQLILVINYDCPNHYEDYVHRVGRTGRAGNKGYAYTFITE 590
Query: 621 HDTDVFYDLKQMLIQSNSPVPPEL 644
D+ + L S PVP E+
Sbjct: 591 DQGRYAGDVIKALELSERPVPEEV 614
>gi|195163860|ref|XP_002022767.1| GL14575 [Drosophila persimilis]
gi|194104790|gb|EDW26833.1| GL14575 [Drosophila persimilis]
Length = 1243
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT+ D +R + + KG P+P++ WA+ ++ + + + ++G++ P+PIQ
Sbjct: 507 LSRMTQSDVEKYRTELEGVQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQ 566
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + +E +G A++MAPTREL
Sbjct: 567 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPNL---DEGDGAIAIIMAPTRELC 623
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ +F+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 624 MQIGKDIRRFSKSLGLRPVCVYGGTGISEQIAELKRGSEIIVCTPGRMIDMLAANSGRVT 683
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 684 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 726
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 727 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQHVVILNDESKFFKLLELLGIYQEAG- 785
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVF + ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 786 -SIIVFADKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 844
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + L
Sbjct: 845 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRALD 904
Query: 635 QSNSPVPPEL 644
S VP EL
Sbjct: 905 LSGCLVPAEL 914
>gi|322797566|gb|EFZ19610.1| hypothetical protein SINV_13775 [Solenopsis invicta]
Length = 692
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 255/425 (60%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + +++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 3 MTPEEVEVYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 62
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 63 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 119
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 120 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 179
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 180 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 222
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK + I+
Sbjct: 223 RQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSTII 282
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 283 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 342
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + + P
Sbjct: 343 VKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITSEQERYAGDILRAHELAGVP 402
Query: 640 VPPEL 644
VP L
Sbjct: 403 VPEPL 407
>gi|18410973|ref|NP_567067.1| DEAD-box ATP-dependent RNA helicase 11 [Arabidopsis thaliana]
gi|42572719|ref|NP_974455.1| DEAD-box ATP-dependent RNA helicase 11 [Arabidopsis thaliana]
gi|79315530|ref|NP_001030884.1| DEAD-box ATP-dependent RNA helicase 11 [Arabidopsis thaliana]
gi|75329861|sp|Q8LA13.1|RH11_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 11
gi|21593670|gb|AAM65637.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332646270|gb|AEE79791.1| DEAD-box ATP-dependent RNA helicase 11 [Arabidopsis thaliana]
gi|332646271|gb|AEE79792.1| DEAD-box ATP-dependent RNA helicase 11 [Arabidopsis thaliana]
gi|332646272|gb|AEE79793.1| DEAD-box ATP-dependent RNA helicase 11 [Arabidopsis thaliana]
Length = 612
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 262/422 (62%), Gaps = 20/422 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +A+ L L + R Y P+P+Q AIP+ L +RD++
Sbjct: 135 EDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMAC 194
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEE--NEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + A P+AV+++PTRELA QI +E KF++
Sbjct: 195 AQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSY 254
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +GC++++ATPGRL D LER + ++ LDEADR
Sbjct: 255 QTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA ++
Sbjct: 315 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTMLFSATFPSQIQRLAADFMS 361
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKTAI--VFVNTKKNA 527
N + + +G G +T+LI+Q V ++ES+K S L LL E DK ++ VFV TK+ A
Sbjct: 362 NYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGA 421
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + L + T++HG ++Q++RE++L F+T R +LVATDVA RG+DIP VAHV+
Sbjct: 422 DTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVV 481
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
N+D+P +I+ Y HRIGRTGRAGK+G+AT F ++ + L +++ ++N VP L ++
Sbjct: 482 NFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRY 541
Query: 648 EA 649
+
Sbjct: 542 AS 543
>gi|356538821|ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1107
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 274/460 (59%), Gaps = 26/460 (5%)
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
K +A L L + + +Y+ F + + + K++ +MT + ++R+ + G +P+
Sbjct: 427 KKTKAEKLSLVDHSKIVYEPF--KKNFYIEVKEVSKMTPEESAVYRKQLELKIHGKDVPK 484
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P+++W + L ++L ++++ ++ P PIQ A+P+ + RD IGIA+TGSGKT AFVLP
Sbjct: 485 PIKSWHQTGLASKILETIKKMNFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLP 544
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
ML +I PP+ +GP ++MAPTREL QQI + KFA LG++ V + GG +
Sbjct: 545 MLRHIKDQPPVVA---GDGPIGLIMAPTRELVQQIHSDIKKFAKVLGLRCVPVYGGSGVA 601
Query: 369 EQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
+Q +++G E+V+ TPGR+ID L + L++ Y+V+DEADRM DMGFEPQ+ +
Sbjct: 602 QQISELKRGAEIVVCTPGRMIDILCTSSGKITNLHRVTYLVMDEADRMFDMGFEPQITRI 661
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
+ N++P+ R T +FSAT P VE LARK L PV + +G
Sbjct: 662 V-----QNIRPD------------RQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVV 704
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTL 544
+ I+Q V + ++E+F RL +L E +K I +FV++++ D + K+L + GY +L
Sbjct: 705 NKDITQLVEVRPDNERFLRLLEILGEWYEKGKILIFVHSQEKCDSLFKDLLRHGYPCLSL 764
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HG K Q RE ++ F++ N+LVAT +A RG+D+ ++ VIN+D+P + E Y HR+GR
Sbjct: 765 HGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 824
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TGRAG+ G A TF++ + DL + L S VP +L
Sbjct: 825 TGRAGRKGCAITFISEEEARYAPDLLKALELSEQTVPNDL 864
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 267/445 (60%), Gaps = 31/445 (6%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
Y FD D + + + ++E D +R+ + G +PRP++ + E L L+ A
Sbjct: 140 YAPFDK--DFYEEDASISGLSEEDVTSYRQSIGVRTSGFDVPRPVKQFKELGLDSLLMGA 197
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + GY+NP+PIQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I E +
Sbjct: 198 ITKQGYENPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ---EELGKG 254
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELAQQI E+ KFA GI+V + GG S +Q ++ GCE+V+ATP
Sbjct: 255 EGPIGVICAPTRELAQQIFNESRKFAKPYGIRVSGVFGGMSKLDQFKELKAGCEIVVATP 314
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 315 GRLIDMLKMKALTMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD-------- 361
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEK--- 501
R T +FSATMP VE LAR+ L PV VT G G+A E ++Q ++ +++K
Sbjct: 362 ----RQTLLFSATMPRRVETLAREVLSAPVRVTAGEVGRANEDVTQVAQIVATDADKLQW 417
Query: 502 -FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
S+L +++D GD +VF +TK + + K+L G++V LHG K Q R L+GF
Sbjct: 418 MLSKLPQMVDA-GD--VLVFASTKVRVEELEKHLQDSGFKVAALHGDKDQASRVDVLQGF 474
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLT 619
++ +++VLVATDVA RG+DI + V+NYD +++ + HR+GRTGRAG K GVA T +T
Sbjct: 475 KSGQFHVLVATDVAARGLDIKSIKTVVNYDTAKDMDTHVHRVGRTGRAGDKEGVAYTLVT 534
Query: 620 FHDTDVFYDLKQMLIQSNSPVPPEL 644
+ DL + + VP EL
Sbjct: 535 QKEARFAGDLVNGFVAAGQNVPSEL 559
>gi|357156241|ref|XP_003577389.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like
[Brachypodium distachyon]
Length = 609
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 257/426 (60%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G ++P + +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 125 EDIPVETSGREVPPAVSTFAEIDLGAALNDNIRRCKYVRPTPVQRHAIPISLAGRDLMAC 184
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEE----NEAEGPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P+++ I R PP+ + P A++++PTREL+ QI EE KF
Sbjct: 185 AQTGSGKTAAFCFPIISGIMRGPPVQRPQRGGSRTACPLALILSPTRELSMQIHEEARKF 244
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEA
Sbjct: 245 SYQTGVRVVVAYGGAPITQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEA 304
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQV +++ M ++ P R R T +FSAT P ++R+A +
Sbjct: 305 DRMLDMGFEPQVRRIVEQM---DMPP----------RGVRQTLLFSATFPGEIQRMASDF 351
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT-------AIVFVNT 523
L N + + +G G +TELI+Q V + E++K S L LL D +VFV T
Sbjct: 352 LENYIFLAVGRVGSSTELIAQRVEFVHEADKRSHLMDLLHAQRDSADHGKQALTLVFVET 411
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L G+ T++HG ++Q++RE +L F++ + +LVATDVA RG+DIP V
Sbjct: 412 KRGADSLENWLCTNGFPATSIHGDRNQQEREYALRSFKSGQTPILVATDVAARGLDIPHV 471
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F + ++ + L ++ +SN VP
Sbjct: 472 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFSDNNASMAKSLADLMQESNQEVPAW 531
Query: 644 LAKHEA 649
L ++ A
Sbjct: 532 LTRYAA 537
>gi|356525235|ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
max]
Length = 619
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/425 (40%), Positives = 259/425 (60%), Gaps = 23/425 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + + R Y P+P+Q AIP+ L RD++
Sbjct: 143 EDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMAC 202
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAE---GPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF P+++ I R P+ P A+V++PTREL+ QI EE KF+
Sbjct: 203 AQTGSGKTAAFCFPIISGIMRGQPVQRPPRGVRTVYPLALVLSPTRELSMQIHEEARKFS 262
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEAD
Sbjct: 263 YQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 322
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 323 RMLDMGFEPQIRKIVEQM---DMPPPGA----------RQTMLFSATFPKEIQRLASDFL 369
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTK 524
N + + +G G +T+LI Q V ++ES+K S L LL + + K A+ VFV TK
Sbjct: 370 SNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETK 429
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K AD + L G+ TT+HG +SQ++RE++L F++ +LVATDVA RG+DIP VA
Sbjct: 430 KGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPHVA 489
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HV+N+D+P +I+ Y HRIGRTGRAGK G+AT F +++ + L +++ ++N VP L
Sbjct: 490 HVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVPAWL 549
Query: 645 AKHEA 649
+++ A
Sbjct: 550 SRYAA 554
>gi|19075356|ref|NP_587856.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe 972h-]
gi|48474674|sp|Q9P7C7.1|PRP11_SCHPO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp11
gi|7380876|emb|CAB85446.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe]
Length = 1014
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 249/421 (59%), Gaps = 28/421 (6%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I +G P+P+ +W++ L+ + + + +GY+ P+ IQ AIP RDVIG+A+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT AF+LPM +I P+ EGP A++M PTRELA QI E F L I+
Sbjct: 466 SGKTIAFLLPMFRHIKDQRPLKT---GEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRA 522
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMID 415
GG I++Q +++G E+V+ TPGR+ID L R L++C Y+VLDEADRM D
Sbjct: 523 CCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFD 582
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
+GFEPQV+ +++ N++P+ R T +FSAT P A+E LARK L+ PV
Sbjct: 583 LGFEPQVMRIIN-----NIRPD------------RQTVLFSATFPRAMEALARKVLKKPV 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG----DKTAIVFVNTKKNADMVA 531
+T+G + Q V + E KFSRL LL EL D +VFV+ +++AD +
Sbjct: 626 EITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALL 685
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
+L K GY ++HGGK Q R+ ++ ++ ++VL+AT V RG+D+ + V+NYD
Sbjct: 686 SDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDC 745
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
P ++E Y HR+GRTGRAG TGVA TF+T D+ + L S PVP EL + AS+
Sbjct: 746 PNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKEL-QTLASQ 804
Query: 652 F 652
F
Sbjct: 805 F 805
>gi|345485035|ref|XP_003425177.1| PREDICTED: putative ATP-dependent RNA helicase an3 isoform 3
[Nasonia vitripennis]
Length = 713
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 258/440 (58%), Gaps = 28/440 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 215 EDIPVEASGEDIPPHISSFDEVKLTEIIKNSINLAGYDKPTPVQKYAIPIIIGRRDVMAC 274
Query: 295 AETGSGKTAAFVLPMLTYISR-----LPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I LPP + + P +V+APTRELA QI +E K
Sbjct: 275 AQTGSGKTAAFLVPILNQIYESGPPPLPPNASGRRKQYPLGLVLAPTRELATQIYDEARK 334
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG ++ EQ + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 335 FAYRSRMRPAVVYGGSNMVEQLRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 394
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 395 ADRMLDMGFEPQIRRIVEQDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 439
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG------DKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E EK S L LL + +VFV
Sbjct: 440 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHEKRSYLLDLLGACNFQEPTQESLTLVFV 499
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L Y VT++HG +SQ +RE +L FR+ +LVAT VA RG+DIP
Sbjct: 500 ETKKGADMLEEFLHNQHYPVTSIHGDRSQHEREDALRRFRSGHTPILVATAVAARGLDIP 559
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +L+++N +P
Sbjct: 560 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNSKNQNLVRDLVSLLVEANQELP 619
Query: 642 PELAKHEASKFKPGTIPDRP 661
L + G RP
Sbjct: 620 HWLEDMCSDSRHGGGASRRP 639
>gi|195397525|ref|XP_002057379.1| GJ17053 [Drosophila virilis]
gi|194147146|gb|EDW62865.1| GJ17053 [Drosophila virilis]
Length = 1244
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 260/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT + +R + + KG P+P++ WA+ ++ + + + ++G++ P+PIQ
Sbjct: 507 LARMTNSEVDKYRSELEGVQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQ 566
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 567 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSL---EDGDGAIAIIMAPTRELC 623
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 624 MQIGKDIRKFSRSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 683
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 684 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 726
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ PV V +G + + Q+VV++ + KF +L LL E G
Sbjct: 727 TFPRQMEALARRILKKPVEVIVGGRSVVCKDVEQNVVILSDEAKFFKLLELLGVYQETG- 785
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 786 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 844
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAG G A TF+T + D+ + L
Sbjct: 845 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGSAYTFITPEQSRYAGDVIRALD 904
Query: 635 QSNSPVPPEL 644
S +PVPP+L
Sbjct: 905 LSGTPVPPDL 914
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 183/445 (41%), Positives = 266/445 (59%), Gaps = 31/445 (6%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
Y FD D + + + ++E D +R+ + G +PRP+R + E L L+ A
Sbjct: 140 YAPFDK--DFYEEDASISGLSEEDVTSYRQSIGVRTSGFDVPRPVRQFKELGLDSLLMGA 197
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + GY+NP+PIQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I E +
Sbjct: 198 ITKQGYENPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ---EELGKG 254
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELAQQI E+ KFA GI+V + GG S +Q ++ GCE+V+ATP
Sbjct: 255 EGPIGVICAPTRELAQQIFNESRKFAKPYGIRVSGVFGGMSKLDQFKELKAGCEIVVATP 314
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 315 GRLIDMLKMKALTMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD-------- 361
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEK--- 501
R T +FSATMP VE LAR+ L PV VT G G+A E ++Q ++ +++K
Sbjct: 362 ----RQTLLFSATMPRRVETLAREVLSAPVRVTAGEVGRANEDVTQVAQIVATDADKLQW 417
Query: 502 -FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
S+L +++D GD +VF +TK + + K+L G++V LHG K Q R L+GF
Sbjct: 418 MLSKLPQMVDA-GD--VLVFASTKVRVEELEKHLQDSGFKVAALHGDKDQASRVDVLQGF 474
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLT 619
++ +++VLVATDVA RG+DI + V+NYD +++ + HR+GRTGRAG K GVA T +
Sbjct: 475 KSGQFHVLVATDVAARGLDIKSIKTVVNYDTAKDMDTHVHRVGRTGRAGDKEGVAYTLVA 534
Query: 620 FHDTDVFYDLKQMLIQSNSPVPPEL 644
+ DL + + VP EL
Sbjct: 535 QKEARFAGDLVNGFVAAGQNVPSEL 559
>gi|195998213|ref|XP_002108975.1| hypothetical protein TRIADDRAFT_63563 [Trichoplax adhaerens]
gi|190589751|gb|EDV29773.1| hypothetical protein TRIADDRAFT_63563 [Trichoplax adhaerens]
Length = 654
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 254/430 (59%), Gaps = 24/430 (5%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
+ + TE + +R+D I G IP+P+ +++E ++ + G+K P+PIQ
Sbjct: 47 QNTVTNRTEEEVSRYRDDNKIIVFGRNIPKPVLSFSEASFPDYVMSEINNQGFKLPTPIQ 106
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
+ P+GL RDV+GIA+TGSGKT A+VLP + +I PP+ +GP A+++ PTRE
Sbjct: 107 AQSWPVGLSGRDVVGIAQTGSGKTLAYVLPSIIHIKNQPPL---RHGDGPIALILCPTRE 163
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAV 398
LAQQ+ + F I I GG Q + +G E+ +ATPGRL+D LE R
Sbjct: 164 LAQQVHSVSTTFGRLARINCACIYGGSPKGPQLRELSRGVEICVATPGRLLDFLESRRTN 223
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
LN+C+Y+VLDEADRM+DMGFEPQ+ ++ ++ + R T M+SAT
Sbjct: 224 LNRCSYLVLDEADRMLDMGFEPQIKQIIGSI-----------------KCPRQTVMWSAT 266
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATEL-ISQHVVMMKESEKFSRLQRLLDEL---GD 514
P + LAR++LR+ V + IG++ T I Q V + +E EK +L +LL ++ +
Sbjct: 267 WPKEIRTLAREFLRDYVQINIGSSDLTTNHNIKQIVEVCREEEKEDKLCKLLSDILRQDE 326
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
K IVFV TKK +D +++ L + G+ V +HG K Q +R+ L FR+ R VL+ATDVA
Sbjct: 327 KKTIVFVETKKKSDYLSRRLVRSGWPVLCIHGDKCQSERDRVLSEFRSGRIPVLIATDVA 386
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+DI DV VINYD P N E Y HRIGRT R+GKTG A TF T + +L +L
Sbjct: 387 ARGLDISDVKLVINYDFPNNSEDYVHRIGRTARSGKTGTAYTFFTASNIRQSPNLIALLR 446
Query: 635 QSNSPVPPEL 644
++N P+ P+L
Sbjct: 447 EANQPINPDL 456
>gi|302812625|ref|XP_002987999.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
gi|300144105|gb|EFJ10791.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
Length = 505
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/466 (38%), Positives = 276/466 (59%), Gaps = 24/466 (5%)
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
RK G + ++ ++ L +E D F+ + + +T+ + FR +I+
Sbjct: 17 RKSYGGGSRKKDFDSMVLPKEQFDNLSPFEKNF--YIEHPSVAALTDDEVVDFRRRKDIT 74
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
+G +P+P+R++AE +L+ V + G+K P+ IQ P+ L+ RD++G+AETGSG
Sbjct: 75 VQGRNVPKPVRSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMALKGRDLVGLAETGSG 134
Query: 301 KTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
KT A++LP + +++ P ++ +GP +V+APTRELA QI++E+ KF IK
Sbjct: 135 KTLAYLLPAIVHVNAQPYLAP---GDGPIVLVLAPTRELAVQIQQESAKFGSSSKIKSTC 191
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
I GG Q +++G E+VIATPGRLID LE R+ L + Y+VLDEADRM+DMGFEP
Sbjct: 192 IYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEGRHTNLRRVTYLVLDEADRMLDMGFEP 251
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
Q+ ++ ++P+ R T +SAT P VE+LA ++L +P VTIG
Sbjct: 252 QIRKIV-----GQIRPD------------RQTLYWSATWPKDVEQLANQFLHDPYKVTIG 294
Query: 481 TAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLG 538
++ KA I+QHV ++ + EK+ +L +LLDE D I +F+ TK+ D V K L G
Sbjct: 295 SSSLKANHSIAQHVEVVNDYEKYQKLIKLLDEFMDGGKILIFMETKRGCDQVTKQLRMEG 354
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
+ ++HG KSQ +R+ L F+T + ++ ATDVA RG+D+ D+ +VINYD PG+ E Y
Sbjct: 355 WPALSIHGDKSQAERDWVLSEFKTGKSPIMTATDVAARGLDVKDIRYVINYDFPGSCEDY 414
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HRIGRTGRAG G A TF T + +L +L ++ + PEL
Sbjct: 415 VHRIGRTGRAGAKGTAYTFFTVSNAKHARELVSILSEAGQRITPEL 460
>gi|345485033|ref|XP_003425176.1| PREDICTED: putative ATP-dependent RNA helicase an3 isoform 2
[Nasonia vitripennis]
Length = 704
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 258/440 (58%), Gaps = 28/440 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 206 EDIPVEASGEDIPPHISSFDEVKLTEIIKNSINLAGYDKPTPVQKYAIPIIIGRRDVMAC 265
Query: 295 AETGSGKTAAFVLPMLTYISR-----LPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I LPP + + P +V+APTRELA QI +E K
Sbjct: 266 AQTGSGKTAAFLVPILNQIYESGPPPLPPNASGRRKQYPLGLVLAPTRELATQIYDEARK 325
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG ++ EQ + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 326 FAYRSRMRPAVVYGGSNMVEQLRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 385
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 386 ADRMLDMGFEPQIRRIVEQDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 430
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG------DKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E EK S L LL + +VFV
Sbjct: 431 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHEKRSYLLDLLGACNFQEPTQESLTLVFV 490
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L Y VT++HG +SQ +RE +L FR+ +LVAT VA RG+DIP
Sbjct: 491 ETKKGADMLEEFLHNQHYPVTSIHGDRSQHEREDALRRFRSGHTPILVATAVAARGLDIP 550
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +L+++N +P
Sbjct: 551 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNSKNQNLVRDLVSLLVEANQELP 610
Query: 642 PELAKHEASKFKPGTIPDRP 661
L + G RP
Sbjct: 611 HWLEDMCSDSRHGGGASRRP 630
>gi|157138330|ref|XP_001657248.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869525|gb|EAT33750.1| AAEL013985-PA [Aedes aegypti]
Length = 1029
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 256/430 (59%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ +MT + +++ + I+ KG P+P++ WA ++ + + ++G++ P+PIQ
Sbjct: 338 IAKMTHAEVGVYKTELEGITVKGKGCPKPIKTWAHCGVSKKEFDVLRKLGFEKPTPIQCQ 397
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ + +GP +++M PTREL
Sbjct: 398 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPL---EDGDGPISIIMTPTRELC 454
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KFA L ++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 455 MQIGKDIKKFAKSLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 514
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM D+GFEPQV+ ++D N++P+ R T MFSA
Sbjct: 515 NLRRVTYVVLDEADRMFDLGFEPQVMRIID-----NIRPD------------RQTVMFSA 557
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ + IG + + QHVV+++E KF +L LL ELG
Sbjct: 558 TFPRQMEALARRILKKPIEIQIGGRSVVCKDVEQHVVVLEEDAKFFKLLELLGLYQELG- 616
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ K+L K Y +LHGG Q R+ ++ F+ R +L+AT VA
Sbjct: 617 -SIIVFVDKQENADILLKDLMKASYPCLSLHGGIDQFDRDSTIIDFKQGRVKLLIATSVA 675
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ + V+NYD P + E Y HR GRTGRAG G A TFLT D+ + L
Sbjct: 676 ARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTHEQGRYSGDIIRALE 735
Query: 635 QSNSPVPPEL 644
S VP +L
Sbjct: 736 LSGGTVPDDL 745
>gi|225442260|ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 262/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
M+E++ +RE I+ +G +P+P+ N+ + L +++ + + G+ P+PIQ P+
Sbjct: 74 MSEKEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQEITKAGFAEPTPIQAQGWPM 133
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RDVIGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 134 ALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 190
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID LE + L + Y
Sbjct: 191 QEAAKFGASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTY 250
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 251 LVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLYWSATWPKEVE 293
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LARK+L NP V IG+A KA I QHV ++ E++K++RL +LL+++ D I +F++
Sbjct: 294 QLARKFLYNPCKVVIGSADLKANHAIRQHVEIVSENQKYNRLVKLLEDIMDGGRILIFMD 353
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F+ + ++ ATDVA RG+D+ D
Sbjct: 354 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKD 413
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V P
Sbjct: 414 VKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVAP 473
Query: 643 ELA 645
ELA
Sbjct: 474 ELA 476
>gi|198470027|ref|XP_001355197.2| GA19457 [Drosophila pseudoobscura pseudoobscura]
gi|198147147|gb|EAL32254.2| GA19457 [Drosophila pseudoobscura pseudoobscura]
Length = 1243
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 258/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R + + KG P+P++ WA+ ++ + + + ++G++ P+PIQ
Sbjct: 507 LSRMTPSDVEKYRTELEGVQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQ 566
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + +E +G A++MAPTREL
Sbjct: 567 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPNL---DEGDGAIAIIMAPTRELC 623
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ +F+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 624 MQIGKDIRRFSKSLGLRPVCVYGGTGISEQIAELKRGSEIIVCTPGRMIDMLAANSGRVT 683
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 684 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 726
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 727 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQHVVILNDESKFFKLLELLGIYQEAG- 785
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVF + ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 786 -SIIVFADKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 844
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + L
Sbjct: 845 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRALD 904
Query: 635 QSNSPVPPEL 644
S VP EL
Sbjct: 905 LSGCLVPAEL 914
>gi|156547765|ref|XP_001605842.1| PREDICTED: putative ATP-dependent RNA helicase an3 isoform 1
[Nasonia vitripennis]
Length = 708
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 258/440 (58%), Gaps = 28/440 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP + ++ E KLT + ++ GY P+P+Q AIP+ + +RDV+
Sbjct: 210 EDIPVEASGEDIPPHISSFDEVKLTEIIKNSINLAGYDKPTPVQKYAIPIIIGRRDVMAC 269
Query: 295 AETGSGKTAAFVLPMLTYISR-----LPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF++P+L I LPP + + P +V+APTRELA QI +E K
Sbjct: 270 AQTGSGKTAAFLVPILNQIYESGPPPLPPNASGRRKQYPLGLVLAPTRELATQIYDEARK 329
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
FA+ ++ + GG ++ EQ + +GC +++ATPGRL+D L R L+ C Y+VLDE
Sbjct: 330 FAYRSRMRPAVVYGGSNMVEQLRELDRGCHLLVATPGRLVDMLGRGKIGLHNCRYLVLDE 389
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++ LA
Sbjct: 390 ADRMLDMGFEPQIRRIVEQDTMP-----PTGE----------RQTLMFSATFPKEIQMLA 434
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG------DKTAIVFV 521
R +L N + + +G G +E I+Q +V ++E EK S L LL + +VFV
Sbjct: 435 RDFLSNYIFLAVGRVGSTSENITQKIVWVEEHEKRSYLLDLLGACNFQEPTQESLTLVFV 494
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK ADM+ + L Y VT++HG +SQ +RE +L FR+ +LVAT VA RG+DIP
Sbjct: 495 ETKKGADMLEEFLHNQHYPVTSIHGDRSQHEREDALRRFRSGHTPILVATAVAARGLDIP 554
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V HVIN+D+PG++E Y HRIGRTGR G G+AT+F + ++ DL +L+++N +P
Sbjct: 555 HVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNSKNQNLVRDLVSLLVEANQELP 614
Query: 642 PELAKHEASKFKPGTIPDRP 661
L + G RP
Sbjct: 615 HWLEDMCSDSRHGGGASRRP 634
>gi|195356214|ref|XP_002044575.1| GM20179 [Drosophila sechellia]
gi|194132206|gb|EDW53828.1| GM20179 [Drosophila sechellia]
Length = 1214
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT D +R D I KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 471 LTRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQ 530
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 531 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSM---EDGDGAIAIIMAPTRELC 587
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 588 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 647
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 648 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 690
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + Q+VV++ + KF +L LL E G
Sbjct: 691 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQNVVILNDDAKFFKLLELLGIYQEAG- 749
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 750 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 808
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + +
Sbjct: 809 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIIRAMD 868
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 869 LSGTLIPAEL 878
>gi|449440640|ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
gi|449522189|ref|XP_004168110.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
Length = 622
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 179/423 (42%), Positives = 260/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +I+RE +I +G +PRP+R++ E L + ++G+ P+PIQ P+
Sbjct: 175 MTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLGFVEPTPIQAQGWPM 234
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD++GIAETGSGKT A++LP + +IS P +S EGP +V+APTRELA QI+
Sbjct: 235 ALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSR---GEGPIVLVLAPTRELAVQIQ 291
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF + I+ + GG Q ++ G E+VIATPGRLID LE + L + Y
Sbjct: 292 QEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDMLEAGHTNLRRVTY 351
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 352 LVLDEADRMLDMGFEPQIRTIV-----SQIRPD------------RQTLYWSATWPREVE 394
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR++LRN V IG+ KA + I+Q V ++ E+EK+ RL +LL E+ D + I +FV
Sbjct: 395 KLARQFLRNAYKVIIGSPDLKANQSINQVVEVLPEAEKYRRLIKLLGEVMDGSRILIFVE 454
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D V + L G+ ++HG K Q +R++ L F++ R ++ ATDVA RG+D+ D
Sbjct: 455 TKKGCDKVTRQLRMDGWPALSIHGDKKQAERDLVLSEFKSGRNPIMTATDVAARGLDVKD 514
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
+ VIN+D P ++E Y HRIGRTGRAG G A TF T + DL ++L ++ V P
Sbjct: 515 IKCVINFDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQIVTP 574
Query: 643 ELA 645
L+
Sbjct: 575 ALS 577
>gi|413917331|gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 175/444 (39%), Positives = 261/444 (58%), Gaps = 27/444 (6%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + +MT + +R+ + G +P+P++ W + LT +LL ++++G++ P PIQ
Sbjct: 409 KDITKMTSEEVVDYRKHLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQT 468
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML ++ PP+ +GP ++MAPTREL
Sbjct: 469 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVP---GDGPIGLIMAPTREL 525
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QI + KF+ LGI V+I GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 526 VVQIHSDIKKFSKVLGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 585
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + ++V+DEADRM DMGFEPQ+ ++ N +P+ R T +FS
Sbjct: 586 TNLRRVTFLVMDEADRMFDMGFEPQITRIV-----QNTRPD------------RQTVLFS 628
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + ++E+F RL LL E K
Sbjct: 629 ATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPDTERFFRLLELLGEWYVKG 688
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV+++ D + K+L + GY +LHGGK Q RE ++ F++ ++L+AT VA
Sbjct: 689 KILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTIADFKSNVCSLLIATSVAA 748
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ V+NYD+P + E Y HR+GRTGRAG+ G A TF++ D DL + L
Sbjct: 749 RGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISDEDERYATDLVKALEL 808
Query: 636 SNSPVPPE---LAKHEASKFKPGT 656
S VP + LA +K K GT
Sbjct: 809 SEQAVPQDLKALADRFMAKVKQGT 832
>gi|400601996|gb|EJP69621.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 1195
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 261/450 (58%), Gaps = 31/450 (6%)
Query: 206 YDTFDMRVDRH--WSEK-KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D++ R W E +L E+ E + R + + I G +P+P++ WA+ LT +
Sbjct: 507 YSKIDIQPIRKNFWVEPVELSELNETEVAELRAELDGIKVNGKDVPKPVQKWAQCGLTRQ 566
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
L ++ +G++ P+ IQM AIP + RDVIG+A+TGSGKT AF+LPM +I PP+
Sbjct: 567 TLDVIDNMGFEKPTSIQMQAIPALMSGRDVIGVAKTGSGKTMAFLLPMFRHIKDQPPL-- 624
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
E+EGP ++M PTRELA QI + F +G++ V GG I +Q +++G E++
Sbjct: 625 -KESEGPVGLIMTPTRELATQIHRDCKPFLKMMGMRAVCAYGGAPIRDQIAELKRGAEII 683
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+ID L + R L + YVVLDEADRM DMGFEPQV+ + +N++P+
Sbjct: 684 VCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPDK 738
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
+ T +FSATMP ++ L +K L++PV +T+G + I Q V + E
Sbjct: 739 Q------------TILFSATMPRIIDSLTKKVLKSPVEITVGGRSVVAKEIEQIVEVRDE 786
Query: 499 SEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
+ KF R+ LL EL D+ +++FV ++ AD + K L GY ++HGGK Q R+
Sbjct: 787 NTKFHRVLELLGELYDRDEDARSLIFVERQEKADDLLKELMVKGYPCMSIHGGKDQVDRD 846
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F+ +LVAT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA
Sbjct: 847 STISDFKKGVVPILVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVA 906
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TF+T + + L QS PVP L
Sbjct: 907 VTFITPEQESCAPGIAKALEQSEQPVPERL 936
>gi|115486155|ref|NP_001068221.1| Os11g0599500 [Oryza sativa Japonica Group]
gi|122206897|sp|Q2R1M8.1|RH52C_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 52C
gi|77551918|gb|ABA94715.1| DEAD-box protein 3, X-chromosomal, putative, expressed [Oryza
sativa Japonica Group]
gi|113645443|dbj|BAF28584.1| Os11g0599500 [Oryza sativa Japonica Group]
Length = 623
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 256/426 (60%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G ++P P+ +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 139 EDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMAC 198
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEA----EGPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P+++ I R PP P A++++PTREL+ QI EE KF
Sbjct: 199 AQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKF 258
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEA
Sbjct: 259 SYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEA 318
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQV +++ M ++ P R T +FSAT P ++R+A +
Sbjct: 319 DRMLDMGFEPQVRRIVEQM---DMPPPGA----------RQTMLFSATFPKEIQRMASDF 365
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA-------IVFVNT 523
L N + + +G G +T+LI Q V ++E++K S L LL D +VFV T
Sbjct: 366 LENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTLVFVET 425
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP V
Sbjct: 426 KRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHV 485
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +++ + L +++ +SN VP
Sbjct: 486 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAW 545
Query: 644 LAKHEA 649
L+++ A
Sbjct: 546 LSRYAA 551
>gi|67459931|ref|NP_001019988.1| probable ATP-dependent RNA helicase DDX46 [Danio rerio]
gi|82277867|sp|Q4TVV3.1|DDX46_DANRE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|66473312|gb|AAY46301.1| DEAD box protein 46 [Danio rerio]
Length = 1018
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 246/411 (59%), Gaps = 24/411 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
IS KG P+P++ W + ++ ++L A+++ Y+ P+PIQ AIP + RD+IGIA+T
Sbjct: 327 GISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKT 386
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPM +I P+ EAEGP AV+M PTRELA QI +E KF+ L ++
Sbjct: 387 GSGKTIAFLLPMFRHILDQRPV---GEAEGPLAVIMTPTRELALQITKECKKFSKSLALR 443
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
VV + GG I EQ +++G E+++ TPGR+ID L R L + YVV+DEADRM
Sbjct: 444 VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMF 503
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ ++D N++P+ R T MFSAT P +E LAR+ L P
Sbjct: 504 DMGFEPQVMRIVD-----NVRPD------------RQTVMFSATFPRTMEALARRILSKP 546
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKN 533
V V +G + QHV++++E +KF +L +L +K + I+FV+ +++AD + K+
Sbjct: 547 VEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKD 606
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L K Y +LHGG Q R+ + F+ +LVAT VA RG+D+ + V+NY P
Sbjct: 607 LMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPN 666
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ E Y HR GRTGRAG G A TF+T D+ + L S S VP EL
Sbjct: 667 HYEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAEL 717
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 260/426 (61%), Gaps = 23/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ M+E+D +R+ I G +P+P++ + + +++ A+++ GY+ P+ IQ A
Sbjct: 197 ISGMSEQDVSEYRKSLAIRVSGFDVPKPIKTFEDCGFPSQIMNAIKKQGYEKPTSIQCQA 256
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P+ L RD+IGIA+TGSGKTA+FVLPM+ +I P + +E EGP V+ APTRELA
Sbjct: 257 LPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAH 313
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI E KFA G++V ++ GG S EQ ++ GCE+V+ATPGRLID L+ + + +
Sbjct: 314 QIYLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMMR 373
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 374 ATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTLLFSATMPR 416
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDELGDKT-AIV 519
VE+LAR+ L +P+ VT+G G A E I+Q V V+ +SEK L L E+ D+ +V
Sbjct: 417 KVEKLAREILSDPIRVTVGEVGMANEDITQVVHVIPSDSEKLPWLLEKLPEMIDQGDTLV 476
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F + K D + L + G++V LHG K Q R L+ F++ Y+VL+ATDVA RG+D
Sbjct: 477 FASKKATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLD 536
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
I + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T + +L L+ +
Sbjct: 537 IKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITLKEARFAGELVNSLVAAGQ 596
Query: 639 PVPPEL 644
V EL
Sbjct: 597 NVSVEL 602
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/501 (38%), Positives = 290/501 (57%), Gaps = 32/501 (6%)
Query: 151 LFGRGFRAGMDRREQKKLAAKN-EKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTF 209
L RAG D E+ AAK + M E V ++ ++ + + Y+ F
Sbjct: 126 LAADALRAGYDSDEEVYAAAKAVDAGMLEYDSDDNPVVVDKKKIEPIQALDHGSIEYEPF 185
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
D + + EM+E+D + + I G ++PRP++ + + +P+L+ A+ +
Sbjct: 186 SK--DFYEESPSISEMSEQDVAEYMKSLAIRVSGFEVPRPIKTFEDCGFSPQLMNAIAKQ 243
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPY 329
GY+ P+PIQ A+P+ L D+IG+A+TGSGKTAAFVLPM+ +I P + +E EGP
Sbjct: 244 GYEKPTPIQCQALPIVLSGSDIIGMAKTGSGKTAAFVLPMIVHIMDQPELEKE---EGPI 300
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
VV APTRELA QI ET KF+ GI+V ++ GG S +Q ++ GCE+VIATPGRLI
Sbjct: 301 GVVCAPTRELAHQIYLETKKFSKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGRLI 360
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
D L+ + +++ Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 361 DMLKMKALNMSRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------ 403
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKF----SR 504
R T +FSATMP +E+LAR+ L +PV VT+G G+A E I+Q V V+ ++EK +
Sbjct: 404 RQTLLFSATMPRKIEKLAREILTDPVRVTVGEVGRANEDITQVVQVIPSDAEKLPWLIEK 463
Query: 505 LQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L ++DE GD +VF + K D + L + ++V LHG K Q R L+ F++
Sbjct: 464 LPGMIDE-GD--VLVFASKKATVDDIESQLAQKAFKVAALHGDKDQASRMEILQKFKSGV 520
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDT 623
Y+VLVATDVA RG+DI + V+N+D+ ++++ HRIGRTGRAG K G+A T +T +
Sbjct: 521 YHVLVATDVAARGLDIKSIKSVVNFDIAREMDVHVHRIGRTGRAGDKDGIAYTLITQKEA 580
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
+L LI + V EL
Sbjct: 581 RFAGELVNSLIAAGQNVSVEL 601
>gi|302782315|ref|XP_002972931.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
gi|300159532|gb|EFJ26152.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
Length = 534
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 256/414 (61%), Gaps = 22/414 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR +I+ +G +P+P+R++AE +L+ V + G+K P+ IQ P+ L+ RD++
Sbjct: 72 FRRRKDITVQGRNVPKPVRSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMALKGRDLV 131
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
G+AETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI++E+ KF
Sbjct: 132 GLAETGSGKTLAYLLPAIVHVNAQPYLAP---GDGPIVLVLAPTRELAVQIQQESAKFGS 188
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
IK I GG Q +++G E+VIATPGRLID LE R+ L + Y+VLDEADR
Sbjct: 189 SSKIKSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEGRHTNLRRVTYLVLDEADR 248
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ ++P+ R T +SAT P VE+LA ++L
Sbjct: 249 MLDMGFEPQIRKIV-----GQIRPD------------RQTLYWSATWPKDVEQLANQFLH 291
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMV 530
+P VTIG++ KA I+QHV ++ + EK+ +L +LLDE D I +F+ TK+ D V
Sbjct: 292 DPYKVTIGSSSLKANHSIAQHVEVVNDYEKYQKLIKLLDEFMDGGKILIFMETKRGCDQV 351
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
K L G+ ++HG KSQ +R+ L F+T + ++ ATDVA RG+D+ D+ +VINYD
Sbjct: 352 TKQLRMEGWPALSIHGDKSQAERDWVLSEFKTGKSPIMTATDVAARGLDVKDIRYVINYD 411
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
PG+ E Y HRIGRTGRAG G A TF T + +L +L ++ + PEL
Sbjct: 412 FPGSCEDYVHRIGRTGRAGAKGTAYTFFTVSNAKHARELVSILSEAGQRITPEL 465
>gi|221105444|ref|XP_002161749.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Hydra
magnipapillata]
Length = 1335
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/403 (39%), Positives = 247/403 (61%), Gaps = 25/403 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT+ + +++RE +I +G IP+P++ W++ ++ ++L ++++ Y+ P+PIQ
Sbjct: 643 LAKMTQEEVKLYRESLGDIQVRGKSIPKPIKTWSQAGVSTKVLAVLKKLKYEKPTPIQAQ 702
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF++P+ ++ PP+ +E +GP A++M PTRELA
Sbjct: 703 AIPAIMSGRDLIGIAKTGSGKTLAFLIPLFRHVIDQPPL---DENDGPIAIIMTPTRELA 759
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI E KF L + I GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 760 LQIFREAKKFCKQLNLTAACIYGGSGISEQIAELKKGAEIIVCTPGRMIDMLTANNGRVT 819
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
+C Y+V+DEADRM DMGFEPQV+ +LD N++P+ R T +FSA
Sbjct: 820 NCRRCTYLVMDEADRMFDMGFEPQVMRILD-----NIRPD------------RQTVLFSA 862
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E +ARK L P+ V +G + QH ++++E KF +L LL +K +
Sbjct: 863 TFPRQMEAIARKVLNKPIEVQVGGRSVVCSDVEQHALVIEEENKFFKLLELLGVYQEKGS 922
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
+VFV +++ADM+ K+L K Y +LHGG Q R+ ++ F+ ++V+T VA R
Sbjct: 923 VLVFVEKQESADMLFKDLLKNAYPCLSLHGGMDQFDRDSTIADFKNGVTKLMVSTSVAAR 982
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
G+D+ ++ V+NYD P + E Y HR+GRTGRAG G + TF+T
Sbjct: 983 GLDVKNLVLVLNYDCPNHYEDYVHRVGRTGRAGNKGTSFTFIT 1025
>gi|354546411|emb|CCE43141.1| hypothetical protein CPAR2_207840 [Candida parapsilosis]
Length = 455
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/458 (38%), Positives = 274/458 (59%), Gaps = 33/458 (7%)
Query: 225 MTERDWRIFREDFNISYKGSK--IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAI 282
M ERDWRIF E+F+I+Y+G +P +R W E +L +L++++ +GY P+PIQ A+I
Sbjct: 1 MNERDWRIFNEEFSINYRGGGKIVPHAIRYWKECQLQEPILQSIQELGYITPTPIQRASI 60
Query: 283 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP--ISEENEAEGPYAVVMAPTRELA 340
P+ L++ DV+G+AETGSGKT A++LP+L Y+S++ + E P A+++APTRELA
Sbjct: 61 PISLEKLDVVGVAETGSGKTLAYLLPILQYLSQIDSNYMQFERIKNQPLALILAPTRELA 120
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQ----SIEEQG---FRIRQGCEVVIATPGRLIDCLE 393
QI + K LG VVSI+GG +IEE + G ++V+ATPGRL+D ++
Sbjct: 121 LQITAQAEKLCTRLGYNVVSIIGGHQYQSTIEEIDNGRAGTKGGVDIVVATPGRLLDSID 180
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY---R 450
R+ L +C +V+DEADRMIDMGFE + ++ +P+ ++ +D K + R
Sbjct: 181 RKIINLQKCYNLVMDEADRMIDMGFERDLHRLIAYLPTQ----DDLRCTIDGKIFHLTQR 236
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQ--------------HVVMM 496
T MF+AT+ P +E+L + YL +PV VTI AG+A + I Q V+
Sbjct: 237 ITSMFTATISPPIEKLTKSYLTDPVFVTISGAGEALDNIDQKFEYLPTSKMQIGPEVIKQ 296
Query: 497 KESEKFSRLQRLLDELGDKT-AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
+S+ R+ + K I+F N K D ++++LD + +HG K+Q QRE+
Sbjct: 297 IKSDNLLRVIKAHKRNNPKALIIIFANFKHVVDTLSEDLDAKQFPNVIIHGSKTQAQREL 356
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+LE F+ ++L+ATDVA RGIDIP V+ V+N+ MP + Y HRIGRTGRAG+ G +
Sbjct: 357 ALEQFKLHDPSILIATDVAARGIDIPQVSLVVNFQMPNKFDEYIHRIGRTGRAGQFGTSV 416
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 653
+F+ D F +LK+ L + VP L ++ ++ +
Sbjct: 417 SFIDDGDVATFSELKKFLTKGGKKVPDWLYRYNSATIR 454
>gi|195432312|ref|XP_002064167.1| GK20023 [Drosophila willistoni]
gi|194160252|gb|EDW75153.1| GK20023 [Drosophila willistoni]
Length = 1234
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/430 (39%), Positives = 257/430 (59%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L M + +R D I KG P+P++ WA+ ++ + + + ++G++ P+PIQ
Sbjct: 499 LSRMNSSEVDKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQ 558
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 559 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPQL---EDGDGAIAIIMAPTRELC 615
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ +F+ LG+ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 616 MQIGKDIRRFSKSLGLCPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 675
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 676 NLRRVTYIVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 718
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QH V++ + KF +L LL E G
Sbjct: 719 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQHAVILNDDAKFFKLLELLGIYQEAG- 777
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 778 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 836
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + L
Sbjct: 837 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGDIVRALD 896
Query: 635 QSNSPVPPEL 644
S +PVP EL
Sbjct: 897 LSGTPVPAEL 906
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 260/426 (61%), Gaps = 23/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ M+E+D +R+ I G +P+P++ + + + +++ A+++ GY+ P+ IQ A
Sbjct: 208 ISGMSEQDVSEYRKSLAIRVSGFDVPKPIKAFEDCGFSSQIMNAIKKQGYEKPTTIQCQA 267
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P+ L RD+IGIA+TGSGKTA+FVLPM+ +I P + +E EGP V+ APTRELA
Sbjct: 268 LPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAH 324
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI E KFA G++V ++ GG S EQ ++ GCE+V+ATPGRLID L+ + + +
Sbjct: 325 QIFLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMMR 384
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 385 ATYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTLLFSATMPC 427
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDELGDK-TAIV 519
VE+LAR+ L +P+ VT+G G A E I+Q V V +SEK L L E+ D+ +V
Sbjct: 428 KVEKLAREILSDPIRVTVGEVGMANEDITQVVHVTPSDSEKLPWLLEKLPEMIDQGDTLV 487
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F + K D + L + G++V LHG K Q R L+ F++ Y+VL+ATDVA RG+D
Sbjct: 488 FASKKATVDEIESQLAQRGFKVAALHGDKDQASRMDILQKFKSGLYHVLIATDVAARGLD 547
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
I + V+N+D+ +++M+ HRIGRTGRAG K GVA T +T + +L L+ +
Sbjct: 548 IKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITLKEARFAGELVNSLVAAGQ 607
Query: 639 PVPPEL 644
V EL
Sbjct: 608 NVSVEL 613
>gi|346322147|gb|EGX91746.1| DEAD/DEAH box RNA helicase [Cordyceps militaris CM01]
Length = 1216
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/468 (38%), Positives = 267/468 (57%), Gaps = 34/468 (7%)
Query: 206 YDTFDMRVDRH--WSEK-KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D++ R W+E +L E+ E + R + + I G +P+P++ W++ LT +
Sbjct: 531 YSKIDIQPIRKNFWAEPVELSELNEAEVADLRVELDGIKVNGKDVPKPVQKWSQCGLTRQ 590
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
+L ++ +G++ P+ IQM AIP + RDVIG+A+TGSGKT AF+LPM +I PP+
Sbjct: 591 MLDVIDSMGFEKPTSIQMQAIPALMSGRDVIGVAKTGSGKTMAFLLPMFRHIKDQPPL-- 648
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
E++GP ++M+PTRELA QI + F +GI+ V GG I EQ +++G E++
Sbjct: 649 -KESDGPIGLIMSPTRELATQIHRDCKPFLKMMGIRAVCAYGGAPIREQIAELKRGAEII 707
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+ID L + R L + YVVLDEADRM DMGFEPQV+ + +N++P+
Sbjct: 708 VCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPDK 762
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
+ T +FSATMP ++ L +K L +PV +T+G + I Q V + E
Sbjct: 763 Q------------TILFSATMPRIIDSLTKKVLNSPVEITVGGRSVVAKEIEQIVEVRDE 810
Query: 499 SEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
+ KF R+ LL EL D ++FV ++ AD + K L GY ++HGGK Q R+
Sbjct: 811 NTKFHRVLELLGELYENDEDARTLIFVERQEKADDLLKELMVKGYPCMSIHGGKDQIDRD 870
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F+ +L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA
Sbjct: 871 STISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVA 930
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVP---PELAKHEASKFKPGTIPD 659
TF+T + + L QS PVP E+ K K K G D
Sbjct: 931 VTFITPEQESCAPGIAKALEQSEQPVPERLSEMRKAHREKVKTGKAKD 978
>gi|357130377|ref|XP_003566825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
[Brachypodium distachyon]
Length = 1045
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/444 (40%), Positives = 255/444 (57%), Gaps = 27/444 (6%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + M+ D +R+ + +G +P+P++ W + LT +LL ++++G++ P IQ
Sbjct: 391 KDITRMSAEDVASYRKLLELKVRGKDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMSIQA 450
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IG+A+TGSGKT AFVLPML ++ PP+ +GP ++MAPTREL
Sbjct: 451 QALPIIMSGRDCIGVAKTGSGKTLAFVLPMLRHVKDQPPVVP---GDGPIGLIMAPTREL 507
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QI + KF+ LGI V I GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 508 VVQIYSDIKKFSKVLGINCVPIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 567
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + ++VLDEADRM DMGFEPQ+ ++ N +P+ R T +FS
Sbjct: 568 TNLRRVTFLVLDEADRMFDMGFEPQITRIV-----QNTRPD------------RQTVLFS 610
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I Q V + +SE+F RL LL E K
Sbjct: 611 ATFPRQVEILARKVLTTPVEIQMGGRSVVNKDIKQLVEVRPDSERFFRLLELLGEWYAKG 670
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV ++ D + K L + GY +LHGGK Q RE +L F++ NVL+AT VA
Sbjct: 671 KILVFVQSQDKCDALLKQLFQHGYPCLSLHGGKDQNDRESTLADFKSNVCNVLIATSVAS 730
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+ V+NYD+ + E Y HR+GRTGRAG+ G A TF++ + DL + L
Sbjct: 731 RGLDVKDLELVVNYDVTNHYEDYVHRVGRTGRAGRKGCAVTFVSEEEERYAPDLVKALEL 790
Query: 636 SNSPVPPE---LAKHEASKFKPGT 656
S VP + LA SK K GT
Sbjct: 791 SEQAVPEDLKALADRFMSKVKQGT 814
>gi|125577677|gb|EAZ18899.1| hypothetical protein OsJ_34439 [Oryza sativa Japonica Group]
Length = 541
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 256/426 (60%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G ++P P+ +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 57 EDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMAC 116
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEA----EGPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P+++ I R PP P A++++PTREL+ QI EE KF
Sbjct: 117 AQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKF 176
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEA
Sbjct: 177 SYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEA 236
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQV +++ M ++ P R T +FSAT P ++R+A +
Sbjct: 237 DRMLDMGFEPQVRRIVEQM---DMPPPGA----------RQTMLFSATFPKEIQRMASDF 283
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA-------IVFVNT 523
L N + + +G G +T+LI Q V ++E++K S L LL D +VFV T
Sbjct: 284 LENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTLVFVET 343
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP V
Sbjct: 344 KRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHV 403
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +++ + L +++ +SN VP
Sbjct: 404 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAW 463
Query: 644 LAKHEA 649
L+++ A
Sbjct: 464 LSRYAA 469
>gi|356497367|ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1104
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/429 (38%), Positives = 259/429 (60%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ +MT + ++R+ + G +P+P+++W + L ++L ++++ ++ P PIQ
Sbjct: 453 KEISKMTPEEAAVYRKQLELKIHGKDVPKPIKSWHQTGLPSKILETIKKMNFEMPMPIQA 512
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML +I PP+ +GP ++MAPTREL
Sbjct: 513 QALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVA---GDGPIGLIMAPTREL 569
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QQI + KFA LG++ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 570 VQQIHSDIKKFAKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 629
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 630 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPD------------RQTVLFS 672
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + ++E+F RL +L E +K
Sbjct: 673 ATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPDNERFLRLLEILGEWYEKG 732
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I +FV++++ D + K+L + GY +LHG K Q RE ++ F++ N+LVAT +A
Sbjct: 733 KILIFVHSQEKCDSLFKDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAA 792
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ VIN+D+P + E Y HR+GRTGRAG+ G A TF++ + DL + L
Sbjct: 793 RGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEEARYAPDLLKALEL 852
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 853 SEQIVPNDL 861
>gi|194763447|ref|XP_001963844.1| GF21236 [Drosophila ananassae]
gi|190618769|gb|EDV34293.1| GF21236 [Drosophila ananassae]
Length = 1211
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 259/430 (60%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT + +R + + KG P+P++ WA+ ++ + + + R+G++ P+PIQ
Sbjct: 474 LSRMTAAEVEKYRSELEGVQVKGKGCPKPIKTWAQCGVSKKEMDVLRRLGFEKPTPIQCQ 533
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 534 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSL---EDGDGAIAIIMAPTRELC 590
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KF+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 591 MQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGSEIIVCTPGRMIDMLAANSGRVT 650
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 651 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 693
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHVV++ + KF +L LL E G
Sbjct: 694 TFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQHVVILNDDAKFFKLLELLGIYQEAG- 752
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L K Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 753 -SIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 811
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAGK G A TF+T + D+ + L
Sbjct: 812 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGQAFTFITPEQSRYAGDIIRALD 871
Query: 635 QSNSPVPPEL 644
S + +P EL
Sbjct: 872 LSGTLIPAEL 881
>gi|395504324|ref|XP_003756504.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Sarcophilus
harrisii]
Length = 1030
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 255/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + IFR + I+ KG P+P++ W + ++ ++L ++++ Y+ P+PIQ
Sbjct: 341 LAKMSQDEVNIFRLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHCYEKPTPIQAQ 400
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 401 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEE---GEGPIAVIMTPTRELA 457
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 458 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 517
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 518 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 560
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E KF +L LL + +
Sbjct: 561 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEENKFLKLLELLGHYQESGS 620
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 621 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 680
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 681 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 740
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 741 GTAVPPDLEK 750
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 263/425 (61%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ +TE R++ +I G+ + P+ ++ LL+A+ + + P+PIQ A
Sbjct: 276 IANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQA 335
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IP+ L RD+I IA+TGSGKTA F+ P +++I P + + +GP A+ +APTRELA
Sbjct: 336 IPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEK---GDGPIALFLAPTRELAH 392
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI ET+K++ Y +K + GG S ++Q ++ GCE+++ATPGRLID ++ + LN+
Sbjct: 393 QIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNR 452
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
+Y+VLDEAD+M D GF PQV+ +++ +++P+ R T +FSAT P
Sbjct: 453 VSYLVLDEADKMFDFGFGPQVLSIVN-----HVRPD------------RQTLLFSATFKP 495
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRL-QRLLDELGDKTAIV 519
VE AR L +P+ ++IG G A I+Q V ++K +S+K++ L +L L + ++
Sbjct: 496 NVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLI 555
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+TK + ++ NL K G++ TLHG K+Q +R +++ F+ + N+L+ATDVA RG+D
Sbjct: 556 FVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLD 615
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
IP + +V+NYD +IE +THRIGRTGRAG TGVA T +T D DL + L ++
Sbjct: 616 IPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQF 675
Query: 640 VPPEL 644
VPPEL
Sbjct: 676 VPPEL 680
>gi|255572963|ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 505
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 262/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
M+ER+ +R+ I+ +G +P+P++++ + +L V R G+ P+PIQ P+
Sbjct: 73 MSEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVLEEVTRAGFVEPTPIQAQGWPM 132
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 133 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 189
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID LE + L + Y
Sbjct: 190 QEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTY 249
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 250 LVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPKEVE 292
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR++L NP V IG+A KA I QHV ++ E++K+++L +LL+++ D + I +F++
Sbjct: 293 QLARQFLYNPYKVVIGSADLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 352
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F+ + ++ ATDVA RG+D+ D
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKD 412
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V P
Sbjct: 413 VKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTASNARFAKELISILEEAGQKVSP 472
Query: 643 ELA 645
ELA
Sbjct: 473 ELA 475
>gi|8489871|gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
Length = 622
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/401 (44%), Positives = 242/401 (60%), Gaps = 32/401 (7%)
Query: 236 DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
D +S + P P+ ++ + L P +++ + Y PS IQ A+P+ L RD++G A
Sbjct: 103 DVTVSSDSTAAPGPIESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCA 162
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL- 354
ETGSGKTAAF +PML + PPI +GP A+V+APTRELAQQIE+E F+ L
Sbjct: 163 ETGSGKTAAFTIPMLQHCLVQPPI---RRGDGPLALVLAPTRELAQQIEKEVQAFSRSLE 219
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
+K +VGG +IE+Q +R G E+ +ATPGR ID L++ L++ +YVVLDEADRM+
Sbjct: 220 SLKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRML 279
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ ++ ++P EK T +FSATMP +E LA++YL NP
Sbjct: 280 DMGFEPQIREIMRSLP--------------EKH---QTLLFSATMPVEIEALAKEYLANP 322
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT---------AIVFVNTKK 525
V V +G T +SQ +V + SEK RL LL E + IVFV K
Sbjct: 323 VQVKVGKVSSPTTNVSQTLVKVSGSEKIDRLLDLLVEEASQAEKCGHRFPLTIVFVERKT 382
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
D VA+ L G +LHGG SQ +RE +L+ FR+ ++LVATDVA RG+D+ V+H
Sbjct: 383 RCDEVAEALVAQGLSAVSLHGGHSQNEREAALQNFRSSSTSILVATDVASRGLDVTGVSH 442
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
VIN D+P E Y HRIGRTGRAG TG+AT+F T D D+F
Sbjct: 443 VINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYT--DRDMF 481
>gi|242080665|ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
gi|241941451|gb|EES14596.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
Length = 1062
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 261/444 (58%), Gaps = 27/444 (6%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + +MT + +R+ + G +P+P++ W + LT +LL ++++G++ P PIQ
Sbjct: 406 KDISKMTSEEVVEYRKHLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQT 465
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML ++ PP+ +GP ++MAPTREL
Sbjct: 466 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVP---GDGPIGLIMAPTREL 522
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QI + KF+ LGI V+I GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 523 VVQIHSDIKKFSKVLGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 582
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + ++V+DEADRM DMGFEPQ+ ++ N +P+ R T +FS
Sbjct: 583 TNLRRVTFLVMDEADRMFDMGFEPQITRIV-----QNTRPD------------RQTVLFS 625
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + ++E+F RL LL E K
Sbjct: 626 ATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPDTERFFRLLELLGEWYVKG 685
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV+++ D + K+L + GY +LHGGK Q RE ++ F++ ++L+AT VA
Sbjct: 686 KILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTIADFKSNVCSLLIATSVAA 745
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ V+NYD+P + E Y HR+GRTGRAG+ G A TF++ + DL + L
Sbjct: 746 RGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKALEL 805
Query: 636 SNSPVPPE---LAKHEASKFKPGT 656
S VP + LA +K K GT
Sbjct: 806 SEQAVPQDLKALADRFMAKVKQGT 829
>gi|312371167|gb|EFR19420.1| hypothetical protein AND_22552 [Anopheles darlingi]
Length = 1161
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 254/425 (59%), Gaps = 25/425 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT+ + ++++ I+ KG P+P++ WA ++ + + ++G++ P+PIQ AIP
Sbjct: 461 MTQTEVDAYKKELEGIAVKGKGCPKPIKTWAHCGVSRKEFEVLRKLGFEKPTPIQCQAIP 520
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+ + +GP A++M PTREL QI
Sbjct: 521 AIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPL---EDGDGPIAIIMTPTRELCMQI 577
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLN 400
++ KF+ L ++ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 578 GKDIKKFSKSLNLRTVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 637
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSAT P
Sbjct: 638 RVTYIVLDEADRMFDMGFEPQVMRIID-----NIRPD------------RQTVMFSATFP 680
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L+ P+ V +G + + QHVV++++ KF +L LL ++ + IV
Sbjct: 681 RQMEALARRILKKPIEVQVGGRSVVCKEVEQHVVVLEDEAKFFKLLELLGLYQEQGSIIV 740
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD++ K+L K Y +LHGG Q R+ ++ F+ R +L+AT VA RG+D
Sbjct: 741 FVDKQENADILLKDLMKASYACMSLHGGIDQFDRDSTMNDFKQGRVKLLIATSVAARGLD 800
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TFLT D+ + L S
Sbjct: 801 VKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDIIRALELSGGT 860
Query: 640 VPPEL 644
VP +L
Sbjct: 861 VPEDL 865
>gi|195060349|ref|XP_001995786.1| GH17577 [Drosophila grimshawi]
gi|193896572|gb|EDV95438.1| GH17577 [Drosophila grimshawi]
Length = 1302
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 170/430 (39%), Positives = 257/430 (59%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT + +R D + KG P+P++ WA+ ++ + + + ++G++ P+PIQ
Sbjct: 543 LGRMTNSEVDKYRTDLEGVQVKGKGCPKPIKTWAQCGVSKKEMDVLRKLGFEKPTPIQCQ 602
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P + + +G A++MAPTREL
Sbjct: 603 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPTL---EDGDGAIAIIMAPTRELC 659
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ +F+ LG++ V + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 660 MQIGKDIRRFSRSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 719
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 720 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 762
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ PV V +G + + QHVV++ + KF +L LL E G
Sbjct: 763 TFPRQMEALARRILKKPVEVIVGGRSVVCKDVEQHVVILNDEAKFFKLLELLGIYQETG- 821
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD++ ++L + Y +LHGG Q R+ ++ F++ + +L+AT VA
Sbjct: 822 -SIIVFVDKQENADILLRDLMRASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVA 880
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ D+ V+NYD+P + E Y HR GRTGRAG G A TF+T D+ +
Sbjct: 881 ARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGCAFTFITPEQARYAGDVIRAFD 940
Query: 635 QSNSPVPPEL 644
S + +PPEL
Sbjct: 941 LSGTLIPPEL 950
>gi|342887883|gb|EGU87311.1| hypothetical protein FOXB_02187 [Fusarium oxysporum Fo5176]
Length = 1214
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 179/455 (39%), Positives = 261/455 (57%), Gaps = 32/455 (7%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L ++ +G++ P
Sbjct: 548 WVEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVIDNLGFEKP 607
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P + RDVIG+A+TGSGKT AF+LPM +I PP+ + +GP ++M
Sbjct: 608 TPIQMQALPALMSGRDVIGVAKTGSGKTMAFLLPMFRHIKDQPPL---KDTDGPIGLIMT 664
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI + F +G++ V GG I +Q +++G E+++ TPGR+ID L
Sbjct: 665 PTRELAVQIHRDCKPFLKMMGLRSVCAYGGAPIRDQIAELKRGAEIIVCTPGRMIDLLAA 724
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 725 NQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD------------RQ 767
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NP+ VT+G + I Q V + E KF R+ LL E
Sbjct: 768 TILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIDQIVEVRDEPSKFLRVLELLGE 827
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ ++FV ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 828 LYDRDEDARTLIFVERQEKADDLLKELMIKGYPCMSIHGGKDQIDRDSTISDFKKGVVPI 887
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 888 LIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCSV 947
Query: 628 DLKQMLIQSNSPVP---PELAKHEASKFKPGTIPD 659
+ + L QS PVP E+ K K K G D
Sbjct: 948 GIAKALEQSGQPVPERLDEMRKAHREKVKSGKAKD 982
>gi|218199270|gb|EEC81697.1| hypothetical protein OsI_25294 [Oryza sativa Indica Group]
Length = 639
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 257/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 154 EDIPVETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMAC 213
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I SR PP S + P A++++PTREL+ QI EE KFA+
Sbjct: 214 AQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAY 273
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G E+++ATPGRL+D LER L Y+ LDEADR
Sbjct: 274 QTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADR 333
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++R+A +L
Sbjct: 334 MLDMGFEPQIRKIVEQM---DMPPRGE----------RQTMLFSATFPKEIQRMASDFLA 380
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKT------AIVFVNTKK 525
+ + + +G G +T+LI Q V + +++K S L LL + + T +VFV TK+
Sbjct: 381 DYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQRANGTHGKQALTLVFVETKR 440
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VAH
Sbjct: 441 GADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAH 500
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
VIN+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 501 VINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWLE 560
Query: 646 KHEA 649
++ A
Sbjct: 561 RYAA 564
>gi|143361556|sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
Length = 494
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 260/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ +G +P+P+R + + +L+ + + G+ P+PIQ P+
Sbjct: 65 MTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 125 ALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 181
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID +E + L + Y
Sbjct: 182 QEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTY 241
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 242 LVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPKEVE 284
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR +L +P V IG+ KA ISQHV ++ ES+K+++L LL+++ D + I +F++
Sbjct: 285 QLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMD 344
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 345 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 404
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + DL +L ++ V P
Sbjct: 405 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSP 464
Query: 643 ELA 645
ELA
Sbjct: 465 ELA 467
>gi|115471073|ref|NP_001059135.1| Os07g0202100 [Oryza sativa Japonica Group]
gi|75325411|sp|Q6Z4K6.1|RH52B_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 52B; AltName:
Full=OsPL10b
gi|34393986|dbj|BAC83834.1| putative DEAD-box RNA helicase DEAD3 [Oryza sativa Japonica Group]
gi|113610671|dbj|BAF21049.1| Os07g0202100 [Oryza sativa Japonica Group]
gi|222636630|gb|EEE66762.1| hypothetical protein OsJ_23477 [Oryza sativa Japonica Group]
Length = 638
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 257/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 153 EDIPVETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMAC 212
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I SR PP S + P A++++PTREL+ QI EE KFA+
Sbjct: 213 AQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAY 272
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G E+++ATPGRL+D LER L Y+ LDEADR
Sbjct: 273 QTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADR 332
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++R+A +L
Sbjct: 333 MLDMGFEPQIRKIVEQM---DMPPRGE----------RQTMLFSATFPKEIQRMASDFLA 379
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
+ + + +G G +T+LI Q V + +++K S L LL + K A+ VFV TK+
Sbjct: 380 DYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQRANGTHGKQALTLVFVETKR 439
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VAH
Sbjct: 440 GADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAH 499
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
VIN+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 500 VINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWLE 559
Query: 646 KHEA 649
++ A
Sbjct: 560 RYAA 563
>gi|449458179|ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
Length = 505
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 264/423 (62%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTER+ +R+ I+ +G +P+P++++ + +++ + + G+ P+PIQ P+
Sbjct: 73 MTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPM 132
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P +S +GP +V+APTRELA QI+
Sbjct: 133 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP---GDGPIVLVLAPTRELAVQIQ 189
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK + GG Q +++G E+VIATPGRLID +E + L + Y
Sbjct: 190 QEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTY 249
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 250 LVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPKEVE 292
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR++L NP V IG+ KA I QHV ++ E++K+++L +LL+++ D + I +F++
Sbjct: 293 QLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMD 352
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L FR+ + ++ ATDVA RG+D+ D
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKD 412
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V P
Sbjct: 413 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSP 472
Query: 643 ELA 645
ELA
Sbjct: 473 ELA 475
>gi|384245234|gb|EIE18729.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 647
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 265/441 (60%), Gaps = 28/441 (6%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MTE + +R++ +I +G IP P++NW + L+ +L +++ G+ P PIQ A+P
Sbjct: 1 MTEEEVAAYRKELEDIKVRGKDIPTPVKNWNQCGLSSRVLDVLQKGGFARPMPIQAQALP 60
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD IGIA+TGSGKT AFVLPML +I PP+++ +GP ++VMAPTREL QI
Sbjct: 61 AIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLAQ---GDGPISLVMAPTRELVVQI 117
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLN 400
++ +F+ L + VV GG ++ Q +++G EVV+ TPGR+ID L + L
Sbjct: 118 GKDIRRFSKALALSVVCAYGGSAVAGQIADLKRGAEVVVCTPGRMIDLLATSGGKITNLR 177
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ Y+V+DEADRM DMGFEPQ++ ++ N++P+ R T MFSAT P
Sbjct: 178 RVTYLVMDEADRMFDMGFEPQIMRIV-----HNIRPD------------RQTVMFSATFP 220
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
AVE LA++ L +P+ + +G ISQ V + E ++F RL +L E ++ I +
Sbjct: 221 RAVEVLAKQVLESPIEIQVGGRSVVNSDISQSVEIRPEEDRFLRLLEILGEWYERGKILI 280
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+++ D + ++L K+GY +LHGGK Q RE ++ F++ N+LVAT VA RG+D
Sbjct: 281 FVSSQDQCDNLFRDLIKVGYPCLSLHGGKDQSDRESTINDFKSDVCNLLVATGVAARGLD 340
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ ++ V+NYD P + E Y HR+GRTGRAG G A TF+ D DL + L +S +P
Sbjct: 341 VKELVLVVNYDTPNHHEEYVHRVGRTGRAGNKGTAITFIAPDDEKYAPDLVKALRESGAP 400
Query: 640 VPPE---LAKHEASKFKPGTI 657
VP + LA A K K GT+
Sbjct: 401 VPKDLQALADSFALKRKAGTV 421
>gi|322695045|gb|EFY86860.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
acridum CQMa 102]
Length = 1161
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 254/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L ++ +GY+ P
Sbjct: 498 WVEPAELSALTEEELADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVIDNLGYEKP 557
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+ IQM AIP + RDV+G+A+TGSGKT AF+LPM +I PPI + +GP ++M
Sbjct: 558 TTIQMQAIPTLMSGRDVVGVAKTGSGKTVAFLLPMFRHIMDQPPI---KDTDGPIGLIMT 614
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI + F +G++ V GG I +Q +++G E+++ TPGR+ID L
Sbjct: 615 PTRELATQIHRDCKPFLKSMGLRAVCAYGGAPIRDQIAELKRGAEIIVCTPGRMIDLLAA 674
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + M R +
Sbjct: 675 NQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFAGM-----------------RPDKQ 717
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L++PV +T+G + I Q V + +ES KF R+ LL E
Sbjct: 718 TILFSATMPRIIDSLTKKVLKSPVEITVGGRSVVAKEIEQIVEVREESTKFFRVLELLGE 777
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ A++FV+ ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 778 LYDRDEDARALIFVDRQEKADDLLKELMVKGYPCMSIHGGKDQVDRDSTISDFKKGVVPL 837
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
LVAT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 838 LVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPDQENCAP 897
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP L
Sbjct: 898 GIAKALEQSEQPVPERL 914
>gi|378729404|gb|EHY55863.1| hypothetical protein HMPREF1120_03978 [Exophiala dermatitidis
NIH/UT8656]
Length = 1216
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/430 (40%), Positives = 253/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ E TE D R + NI +G +P+P++ WA+ L ++L ++R+GY+ P+ IQ
Sbjct: 547 MAEWTEEDVAALRMELDNIKVRGVNVPKPVQKWAQCGLGVQVLEVIQRLGYEAPTSIQAQ 606
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ + +GP +V++PTRELA
Sbjct: 607 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL---DPLDGPIGLVLSPTRELA 663
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E F L ++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 664 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDLLAANGGRVT 723
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L SN++P+ R T +FSA
Sbjct: 724 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----SNIRPD------------RQTVLFSA 766
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L P+ + +G I+Q V + +ES KF RL LL +L
Sbjct: 767 TFPRQMEALARKTLSKPIEIVVGGRSVVAPEITQIVEVREESTKFVRLLELLGKLYEDDK 826
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D ++FV+ +++AD + ++L K GY ++HGGK Q R+ ++ F+ +L+AT
Sbjct: 827 NEDDRVLIFVDRQESADGLLRDLMKRGYPCMSIHGGKDQIDRDSTIADFKAGVIPILIAT 886
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 887 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQDRYAVDIAK 946
Query: 632 MLIQSNSPVP 641
L QS PVP
Sbjct: 947 ALKQSGQPVP 956
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 264/442 (59%), Gaps = 25/442 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YDTF D + + + M++++ + + I G +PRP++N+ + L+ A
Sbjct: 176 YDTFTK--DFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFEDCGFPVPLMNA 233
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + Y+ P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E
Sbjct: 234 IAKQAYQKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE--- 290
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELA QI E KFA ++V ++ GG S +Q ++ GCEVVIATP
Sbjct: 291 EGPIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATP 350
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P
Sbjct: 351 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPG-------- 397
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS- 503
R T +FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ ++EK
Sbjct: 398 ----RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVIPSDAEKMPW 453
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L++L + D +VF + K D + + L++ G+R+ LHG K Q R +L+ F++
Sbjct: 454 LLEKLPGMIDDGDVLVFASKKARVDEIERELNQRGFRIAALHGDKDQASRMETLQKFKSG 513
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHD 622
Y+VLVATDVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T +
Sbjct: 514 TYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 573
Query: 623 TDVFYDLKQMLIQSNSPVPPEL 644
+L Q LI + VP EL
Sbjct: 574 ARFAGELVQSLIAAGQDVPNEL 595
>gi|356526023|ref|XP_003531619.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 262/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT+ + +R+ I+ +G IP+P++ + + +L+ + + G+ P+PIQ P+
Sbjct: 75 MTDAEVNEYRQQREITVEGRDIPKPVKTFHDAGFPEYVLQEITKAGFTEPTPIQSQGWPM 134
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P + N +GP +V+APTRELA QI+
Sbjct: 135 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---NPGDGPIVLVLAPTRELAVQIQ 191
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+ET KF IK I GG Q +++G E+VIATPGRLID LE + L + Y
Sbjct: 192 QETTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTY 251
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 252 LVLDEADRMLDMGFDPQLRKIV-----SQIRPD------------RQTLYWSATWPKEVE 294
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LARK+L NP V IG++ KA I Q+V ++ E +K+ +L +LL+++ D + I +F++
Sbjct: 295 QLARKFLYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMD 354
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 355 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 414
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +V+NYD PG++E Y HRIGRTGRAG G A T+ T + +L +L ++ V P
Sbjct: 415 VKYVVNYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSP 474
Query: 643 ELA 645
ELA
Sbjct: 475 ELA 477
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 264/442 (59%), Gaps = 25/442 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YDTF D + + + M++++ + + I G +PRP++N+ + L+ A
Sbjct: 176 YDTFTK--DFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFEDCGFPVPLMNA 233
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + Y+ P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E
Sbjct: 234 IAKQAYQKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE--- 290
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELA QI E KFA ++V ++ GG S +Q ++ GCEVVIATP
Sbjct: 291 EGPIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATP 350
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P
Sbjct: 351 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPG-------- 397
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS- 503
R T +FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ ++EK
Sbjct: 398 ----RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVIPSDAEKMPW 453
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L++L + D +VF + K D + + L++ G+R+ LHG K Q R +L+ F++
Sbjct: 454 LLEKLPGMIDDGDVLVFASKKARVDEIERELNQRGFRIAALHGDKDQASRMETLQKFKSG 513
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHD 622
Y+VLVATDVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T +
Sbjct: 514 TYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 573
Query: 623 TDVFYDLKQMLIQSNSPVPPEL 644
+L Q LI + VP EL
Sbjct: 574 ARFAGELVQSLIAAGQDVPNEL 595
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 265/442 (59%), Gaps = 25/442 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
Y+ F+ D + + + M+E++ + + I G +PRP++++A+ +L+ A
Sbjct: 102 YEPFNK--DFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNA 159
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + GY+ P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E
Sbjct: 160 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE--- 216
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP VV APTRELA QI E KFA ++V ++ GG S +Q ++ GCE+VIATP
Sbjct: 217 EGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATP 276
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 277 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD-------- 323
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS- 503
R T +FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ ++EK
Sbjct: 324 ----RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPW 379
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L++L + D +VF K D + L++ G+R+ LHG K Q R +L+ F++
Sbjct: 380 LLEKLPGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSG 439
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHD 622
Y+VLVATDVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T +
Sbjct: 440 VYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 499
Query: 623 TDVFYDLKQMLIQSNSPVPPEL 644
+L LI + VP EL
Sbjct: 500 VRFAGELVHCLIAAGQDVPNEL 521
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 176/434 (40%), Positives = 264/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + + M+E+D +R+ I G +PRP++++ + + +L+ A+ + GY+
Sbjct: 187 DFYEEKPSISGMSEQDVAEYRKSLAIRVSGFDVPRPIKSFEDCSFSMQLMNAIVKQGYEK 246
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP V+
Sbjct: 247 PTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVIC 303
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E KF+ GI+V ++ GG S EQ ++ GC++V+ATPGRLID L+
Sbjct: 304 APTRELAHQIYLEAKKFSKSHGIRVSAVYGGMSKLEQFKELKAGCDIVVATPGRLIDLLK 363
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ +++ Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T
Sbjct: 364 MKALNMSKATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTL 406
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRL-QRLLDE 511
+FSATMP VE+LAR+ L +P+ VT+G G A E I+Q V V+ ++EK L ++L
Sbjct: 407 LFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQVIPSDAEKLPWLFEKLPGM 466
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ D +VF + K D + L + G++V LHG K Q R L+ F++ Y+VL+AT
Sbjct: 467 IDDGDVLVFASKKATVDEIESQLAQKGFKVAALHGDKDQASRMEILQKFKSGVYHVLIAT 526
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ +++M+ HRIGRTGRAG K G A T +T + +L
Sbjct: 527 DVAARGLDIKSLKSVVNFDIARDMDMHVHRIGRTGRAGDKDGTAYTLITQKEARFAGELV 586
Query: 631 QMLIQSNSPVPPEL 644
LI + V EL
Sbjct: 587 NSLIAAGQNVSGEL 600
>gi|358400668|gb|EHK49994.1| hypothetical protein TRIATDRAFT_161675, partial [Trichoderma
atroviride IMI 206040]
Length = 1258
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/468 (38%), Positives = 267/468 (57%), Gaps = 34/468 (7%)
Query: 206 YDTFDMRVDRH--WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D++ R W E +L ++E D R + + I G +P+P++ WA+ LT +
Sbjct: 577 YSKIDLQPIRKNFWVEPAELNTLSEADVTDLRLELDGIKVNGKDVPKPVQKWAQCGLTRQ 636
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
L + +G++ P+PIQM A+P + RDV+G+A+TGSGKT AF+LPM +I P+
Sbjct: 637 TLDVISSLGFEKPTPIQMQALPSLMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPL-- 694
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+ +GP ++M PTRELA QI + F + ++ V GG I +Q +++G E++
Sbjct: 695 -KDGDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIRDQIAELKRGAEII 753
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+ID L + R L + YVVLDEADRM DMGFEPQV+ + +N++P+
Sbjct: 754 VCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD- 807
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
R T +FSATMP ++ L +K L++P+ +T+G + I Q V + +E
Sbjct: 808 -----------RQTILFSATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEIEQIVEIREE 856
Query: 499 SEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
S KF R+ LL EL DK +++FV ++ AD + K L + GY ++HGGK Q R+
Sbjct: 857 STKFVRVLELLGELYDKDEDARSLLFVERQEKADDLLKELMQKGYPCMSIHGGKDQVDRD 916
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F+ +L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A
Sbjct: 917 STISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTA 976
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPP---ELAKHEASKFKPGTIPD 659
TF+T + + + L QS+ PVP E+ K K K G D
Sbjct: 977 VTFVTPEQENCAPGIAKALEQSDQPVPERLNEMRKSHREKVKSGKAKD 1024
>gi|358338001|dbj|GAA35819.2| probable ATP-dependent RNA helicase DDX17 [Clonorchis sinensis]
Length = 1557
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 250/426 (58%), Gaps = 21/426 (4%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ + + RD FR ++ G +PRP+ ++E +L +++ +++P+PIQ
Sbjct: 67 VRDRSRRDIEEFRAREKVTVLGHNVPRPVFKFSETGFPSYILNVIKKNRWESPTPIQAQG 126
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L RD++GIA+TGSGKTA+F+LP L + P + +GP +V+ PTRELAQ
Sbjct: 127 WPVALSGRDLVGIAQTGSGKTASFLLPGLVHAKAQPSL---RRGDGPIVLVLVPTRELAQ 183
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
Q+E+ +F Y G + S+ GG S Q ++ + EVVIATPGRL+D L+ + L +
Sbjct: 184 QVEKVVEEFCSYSGFRSASLYGGTSRGGQMDQLARSPEVVIATPGRLLDFLQSKDTNLRR 243
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
C Y+VLDEADRM+DMGFEP + ++ S ++P+ R T M+SAT P
Sbjct: 244 CTYLVLDEADRMLDMGFEPSIRKII-----SQVRPD------------RQTLMWSATWPR 286
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVF 520
V+ LA +L + + + IG+ A I QHV ++KESEKF RL L+ GD IVF
Sbjct: 287 EVKALAEDFLYDYIQINIGSTKLSANHNIQQHVEIVKESEKFHRLLALIKSFGDSRVIVF 346
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
TK+ D V + L G+ +HG K Q +R+ +LE FR+ R ++LVATDVA RG+DI
Sbjct: 347 TETKRRTDTVCRQLLDKGFNALAMHGDKHQRERDRALEQFRSGRTSILVATDVASRGLDI 406
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
D+ +++NYD P E Y HRIGRTGR+ K G A TF T + +L +L ++ V
Sbjct: 407 NDIRYIVNYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFTAKHPRLARELIDVLREAKQEV 466
Query: 641 PPELAK 646
P EL K
Sbjct: 467 PEELEK 472
>gi|323309779|gb|EGA62985.1| Prp28p [Saccharomyces cerevisiae FostersO]
Length = 519
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 172/391 (43%), Positives = 244/391 (62%), Gaps = 26/391 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGAVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
RT + +++AT+VA RG+DIP+V+ V+N+ +
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQI 514
>gi|356512483|ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
max]
Length = 614
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/427 (40%), Positives = 258/427 (60%), Gaps = 27/427 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + + R Y P+P+Q AIP+ L RD++
Sbjct: 138 EDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVRPTPVQRHAIPISLAGRDLMAC 197
Query: 295 AETGSGKTAAFVLPMLTYISR-----LPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF P+++ I R PP P A+V++PTREL+ QI EE K
Sbjct: 198 AQTGSGKTAAFCFPIISGIMRGQSVQRPPRGVRTVY--PLALVLSPTRELSMQIHEEARK 255
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDE
Sbjct: 256 FSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 315
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA
Sbjct: 316 ADRMLDMGFEPQIRKIVEQM---DMPPPGA----------RQTMLFSATFPKEIQRLASD 362
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVN 522
+L N + + +G G +T+LI Q V ++ES+K S L LL + + K A+ VFV
Sbjct: 363 FLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVE 422
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L G+ TT+HG +SQ++RE++L F++ +LVATDVA RG+DIP
Sbjct: 423 TKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPH 482
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
VAHV+N+D+P +I+ Y HRIGRTGRAGK G+AT F +++ + L +++ ++N VP
Sbjct: 483 VAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALSELMQEANQEVPA 542
Query: 643 ELAKHEA 649
L++ A
Sbjct: 543 WLSRFAA 549
>gi|357462687|ref|XP_003601625.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355490673|gb|AES71876.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 613
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 177/434 (40%), Positives = 261/434 (60%), Gaps = 28/434 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + + R Y P+P+Q AIP+ L RD++
Sbjct: 128 EDIPVETSGGNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMAC 187
Query: 295 AETGSGKTAAFVLPMLTYI-----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF P+++ I ++ PP P A+V++PTREL+ QI EE K
Sbjct: 188 AQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVRTVC--PLALVLSPTRELSMQIHEEARK 245
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ G++VV GG I +Q + +G ++++ATPGRL+D LER L+ Y+ LDE
Sbjct: 246 FSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLSMIRYLALDE 305
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA
Sbjct: 306 ADRMLDMGFEPQIRKIVEQM---DMPPAG----------VRQTMLFSATFPKEIQRLASD 352
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVN 522
+L N + + +G G +T+LI Q V ++ES+K S L LL + + K A+ VFV
Sbjct: 353 FLSNYIFLAVGRVGSSTDLIDQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVE 412
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L + TT+HG +SQ++RE +L F++ +LVATDVA RG+DIP
Sbjct: 413 TKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARGLDIPH 472
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
VAHV+N+D+P +I+ Y HRIGRTGRAGK G+AT F ++T + L+ ++ ++N VP
Sbjct: 473 VAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEANQEVPA 532
Query: 643 ELAKHEA-SKFKPG 655
L++ A S F G
Sbjct: 533 WLSRFAARSSFGGG 546
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 261/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + + M+E++ + + I G +PRP++++A+ +L+ A+ + GY+
Sbjct: 182 DFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEK 241
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP VV
Sbjct: 242 PTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE---EGPIGVVC 298
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E KFA ++V ++ GG S +Q ++ GCE+VIATPGRLID L+
Sbjct: 299 APTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLK 358
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ + + Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T
Sbjct: 359 MKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTL 401
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDE 511
+FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ ++EK L++L
Sbjct: 402 LFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGM 461
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ D +VF K D + L++ G+R+ LHG K Q R +L+ F++ Y+VLVAT
Sbjct: 462 IDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVAT 521
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T + +L
Sbjct: 522 DVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELV 581
Query: 631 QMLIQSNSPVPPEL 644
LI + VP EL
Sbjct: 582 HCLIAAGQDVPNEL 595
>gi|321456211|gb|EFX67324.1| hypothetical protein DAPPUDRAFT_302036 [Daphnia pulex]
Length = 797
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 261/441 (59%), Gaps = 25/441 (5%)
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
F R + + + MT+ + +R++ I KG PRP++ WA+ ++ + + ++
Sbjct: 89 FPFRKNFYVEVPDIARMTQEEVDEYRQELEGIKVKGKGCPRPIKAWAQCGVSKKEMEILK 148
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
++ Y+ P+PIQ IP + RD+IGIA+TGSGKT AF+LPM +I P + E +G
Sbjct: 149 KLAYEKPTPIQTQTIPAIMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQPAL---EETDG 205
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P A++M+PTREL QI +E +F L ++VV++ GG I EQ +++G E+++ TPGR
Sbjct: 206 PIAIIMSPTRELCLQIGKECKRFTKSLNLRVVTVYGGTGISEQIAELKRGAEIIVCTPGR 265
Query: 388 LIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
+ID L R L + Y+VLDEADRM DMGFEPQV+ ++D N +P+
Sbjct: 266 MIDMLAANNGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIID-----NTRPD------- 313
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
R T MFSAT P +E LAR+ L PV +T+G + QHV++M++ +KF +
Sbjct: 314 -----RQTVMFSATFPRQMEALARRILNKPVEITVGGRSVVCADVEQHVLVMEDEQKFLK 368
Query: 505 LQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L LL ++ + +VFV +++AD + K+L K GY +LHGG Q R+ ++ F+
Sbjct: 369 LLELLGVYQEQGSVLVFVEKQESADDLLKDLMKAGYDCISLHGGIDQYDRDSAVVDFKNG 428
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+ +++AT VA RG+D+ + V+NYD P + E Y HR GRTGRAG G A TF+T
Sbjct: 429 KIKLMIATSVAARGLDVKHLILVVNYDCPNHHEDYIHRCGRTGRAGNKGFAYTFITPDQQ 488
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
D+ + + QS +PVP EL
Sbjct: 489 RAAGDIIKAMEQSETPVPVEL 509
>gi|384249989|gb|EIE23469.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 573
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 250/412 (60%), Gaps = 17/412 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G ++P P+ ++ + L P L R Y P+P+Q +IP+GL RD++
Sbjct: 77 DDIPVEATGEQVPNPITSFDDADLPPALAANTVRCNYTKPTPVQKYSIPIGLAHRDLMAC 136
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P++ I S + P+ +A P A+V++PTREL+ QI +E KF +
Sbjct: 137 AQTGSGKTAAFCFPIIANILKSNVQPLGRSRKAH-PMALVLSPTRELSSQIYDEARKFTY 195
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
GI+ V + GG + Q + +GC++++ATPGRL D +ER L++ Y+ LDEADR
Sbjct: 196 QTGIRPVVVYGGAPVMNQLREMERGCDILVATPGRLSDLIERARVSLSRVTYLALDEADR 255
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ E ED + R T +FSAT P ++RLA +L
Sbjct: 256 MLDMGFEPQIRRIV----------EQEDMP---RTGQRQTLLFSATFPKEIQRLAADFLH 302
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAK 532
N + + +G G +TELI QH+ + +K L L++ + + +VFV TK+ AD +
Sbjct: 303 NYIFLAVGRVGSSTELIVQHIEYVSPGDKRQVLLDLINTV-EGLTLVFVETKRGADALED 361
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
L + T++HG +SQ++RE +L FR+ R +LVATDVA RG+DIP V HVIN+D+P
Sbjct: 362 FLAGNNFPATSIHGDRSQQEREAALRSFRSGRTPILVATDVAARGLDIPHVTHVINFDLP 421
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+++ Y HRIGRTGRAGK G+AT F T D + L ++L ++N VP L
Sbjct: 422 TDVDDYVHRIGRTGRAGKKGLATAFFTDKDAGLAKGLAELLQETNQEVPGWL 473
>gi|255572248|ref|XP_002527063.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533568|gb|EEF35307.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 650
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/428 (41%), Positives = 256/428 (59%), Gaps = 27/428 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 172 EDIPVETSGENVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLGGRDLMAC 231
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG-----PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF P+++ I ++ S + G P A++++PTREL+ QI EE K
Sbjct: 232 AQTGSGKTAAFCFPIISGIMKMQGQSAQRPLRGARMVYPLALILSPTRELSMQIHEEARK 291
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ G+KVV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDE
Sbjct: 292 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMVRYLALDE 351
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI-YRTTYMFSATMPPAVERLAR 468
ADRM+DMGFEPQ+ ++ E+ D R R T +FSAT P ++RLA
Sbjct: 352 ADRMLDMGFEPQIRKIV--------------EQNDMPRPGARQTMLFSATFPKEIQRLAT 397
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFV 521
+L N + + +G G +T+LI Q V ++ES+K S L LL + + K A+ VFV
Sbjct: 398 DFLFNYIFLAVGRVGSSTDLIIQRVEFVQESDKRSHLMDLLHAQRANGVQGKQALTLVFV 457
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L G+ T++HG +SQ++RE +L FR+ +LVATDVA RG+DIP
Sbjct: 458 ETKKGADSLEHWLYVNGFPATSIHGDRSQQEREQALRSFRSGNTPILVATDVAARGLDIP 517
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
VAHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F + + L ++ +SN VP
Sbjct: 518 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNASLAMALADLMQESNQEVP 577
Query: 642 PELAKHEA 649
L+++ A
Sbjct: 578 AWLSRYAA 585
>gi|358379845|gb|EHK17524.1| hypothetical protein TRIVIDRAFT_112589, partial [Trichoderma virens
Gv29-8]
Length = 1252
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/494 (37%), Positives = 277/494 (56%), Gaps = 41/494 (8%)
Query: 187 EEKPEEAAAL-------KLKEEAADLYDTFDMRVDRH--WSE-KKLEEMTERDWRIFRED 236
E PE AAL K K+ + Y D++ R W E +L ++E D R +
Sbjct: 549 EGDPEADAALLAIANKRKKKDIPSVDYSKIDLQPIRKNFWVEPAELSMLSEADVTDLRLE 608
Query: 237 FN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
+ I G +P+P++ WA+ LT + L + +G++ P+PIQM A+P + RDV+G+A
Sbjct: 609 LDGIKVNGKDVPKPVQKWAQCGLTRQTLDVIGSLGFEKPTPIQMQALPALMSGRDVVGVA 668
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG 355
+TGSGKT AF+LPM +I P+ + +GP ++M PTRELA QI + F +
Sbjct: 669 KTGSGKTMAFLLPMFRHIKDQEPL---KDTDGPIGLIMTPTRELATQIHRDCKPFLKMMN 725
Query: 356 IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADR 412
++ V GG I +Q +++G E+++ TPGR+ID L + R L + YVVLDEADR
Sbjct: 726 LRAVCAYGGAPIRDQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADR 785
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M DMGFEPQV+ + +N++P+ R T +FSATMP ++ L +K L+
Sbjct: 786 MFDMGFEPQVMKIF-----ANMRPD------------RQTILFSATMPRLIDSLTKKVLK 828
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNAD 528
+P+ +T+G + I Q V + +ES KF R+ LL EL DK +++FV ++ AD
Sbjct: 829 SPIEITVGGRSVVAKEIEQIVEIREESTKFVRVLELLGELYDKDEDARSLIFVERQEKAD 888
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ K L + GY ++HGGK Q R+ ++ F+ +L+AT VA RG+D+ + VIN
Sbjct: 889 DLLKELMQKGYPCMSIHGGKDQVDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVIN 948
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP---ELA 645
YD P ++E Y HR GRTGRAG TG A TF+T + + + L QS+ PVP E+
Sbjct: 949 YDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTPEQENCAPGIAKALEQSDQPVPERLNEMR 1008
Query: 646 KHEASKFKPGTIPD 659
K K K G D
Sbjct: 1009 KSHREKVKSGKAKD 1022
>gi|413920524|gb|AFW60456.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 608
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 257/426 (60%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP P+ +A+ L L + R Y P+P+Q AIP+ L RD++
Sbjct: 128 EDIPVEMSGRDIPPPVSTFADIDLGDALNENIRRCKYVRPTPVQRHAIPISLAGRDLMAC 187
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG-------PYAVVMAPTRELAQQIEEET 347
A+TGSGKTAAF P+++ I + P G P A++++PTREL+ QI EE
Sbjct: 188 AQTGSGKTAAFCFPIISGIMKAPSAGRPQRGGGMGMRTAYPSALILSPTRELSMQIHEEA 247
Query: 348 VKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
KF++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ L
Sbjct: 248 RKFSYQTGVRVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQSIRYLAL 307
Query: 408 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
DEADRM+DMGFEPQV +++ M D L R T +FSAT P ++++A
Sbjct: 308 DEADRMLDMGFEPQVRRIVEQM----------DMPLPGAR---QTMLFSATFPKEIQKMA 354
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKT-AIVFVNT 523
+L N + + +G G +T+LI+Q V ++E++K S L LL + G +T +VFV T
Sbjct: 355 SDFLDNYIFLAVGRVGSSTDLIAQRVEFVQEADKRSHLMDLLHAQRDTGKQTLTLVFVET 414
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L G+ T++HG ++Q++RE +L F++ + +LVATDVA RG+DIP V
Sbjct: 415 KRGADSLESWLCMNGFPATSIHGDRNQQEREYALRSFKSGQTPILVATDVAARGLDIPHV 474
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +++ + L ++ +SN VP
Sbjct: 475 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDNNSSLARSLADLMQESNQEVPAW 534
Query: 644 LAKHEA 649
L ++ A
Sbjct: 535 LLRYAA 540
>gi|213405989|ref|XP_002173766.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
gi|212001813|gb|EEB07473.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
Length = 1056
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 242/413 (58%), Gaps = 27/413 (6%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I +G P+P+ +W++ L+ + L + +G++ PS IQ AIP RDVIG+A+TG
Sbjct: 447 IKIRGIDCPKPVTSWSQCGLSVQTLSVIRSLGFEEPSAIQAQAIPAITAGRDVIGVAKTG 506
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT AF+LPM +I P+ EGP AV+M PTRELA QI E FA L ++
Sbjct: 507 SGKTIAFLLPMFRHIMDQRPL---RNGEGPVAVIMTPTRELAVQIFRECKPFAKALDLRA 563
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMID 415
GG I++Q +++G E+V+ TPGR+ID L R L++C YVVLDEADRM D
Sbjct: 564 TCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDVLNANSGRVTNLHRCTYVVLDEADRMFD 623
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
+GFEPQV+ +L+ N++P+ R +FSAT P A+E LARK L+ P+
Sbjct: 624 LGFEPQVMRILN-----NIRPD------------RQVVLFSATFPRAMEALARKVLKKPI 666
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMVA 531
+T+G + Q V + E KF RL LL EL D +VFV+ ++AD +
Sbjct: 667 EITVGGRSVVAAEVEQLVEVRSEESKFPRLLELLGELYNTQPDVRTLVFVDRHESADALL 726
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
L K GY ++HGGK Q R+ ++ ++ ++VL+AT VA RG+D+ + V+NYD
Sbjct: 727 SQLMKRGYSCNSIHGGKDQHDRDSTISDYKMGIFDVLIATSVAARGLDVKSLQLVVNYDC 786
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P ++E Y HR+GRTGRAG TGVA TF+T + + + L S PVP EL
Sbjct: 787 PNHMEDYVHRVGRTGRAGHTGVAVTFVTPDQSRYAVGIAKALKMSKQPVPLEL 839
>gi|255088653|ref|XP_002506249.1| predicted protein [Micromonas sp. RCC299]
gi|226521520|gb|ACO67507.1| predicted protein [Micromonas sp. RCC299]
Length = 1063
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/471 (38%), Positives = 262/471 (55%), Gaps = 28/471 (5%)
Query: 195 ALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNW 253
A KL D D R + + ++ MT+ + + R + I +G +PRP++ W
Sbjct: 339 ADKLGVADHDSIDYPPFRKNFYIESYEIARMTKAEVKELRAELEGIRCRGKDVPRPIKTW 398
Query: 254 AEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI 313
A+ L+ ++ + R G+ P PIQ A+P+ + RD IG+A+TGSGKT ++VLPML ++
Sbjct: 399 AQAGLSNRVMELIRRSGFDKPMPIQCQALPVIMSGRDCIGVAKTGSGKTLSYVLPMLRHV 458
Query: 314 SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFR 373
PI +GP ++M PTREL QI ++ KF G+ VS+ GG + Q
Sbjct: 459 KDQRPI---ESGDGPIGMIMGPTRELVTQIGKDCKKFGRAAGLVAVSVYGGSGVATQIGE 515
Query: 374 IRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
+++GCE+V TPGR+ID L R L + Y+VLDEADRM DMGFEPQ+ +++
Sbjct: 516 LKRGCEIVACTPGRMIDVLTTGAGRITNLRRVTYMVLDEADRMFDMGFEPQITRIMN--- 572
Query: 431 SSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
NL+P+ R T MFSAT P A+E LAR L NPV + +G I
Sbjct: 573 --NLRPD------------RQTVMFSATFPHAMEALARSALTNPVEIQVGGRSVVNSDIE 618
Query: 491 QHVVMMKESEKFSRLQRLLDELGDKT-AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKS 549
Q V M E ++F R+ LL E ++ I+FV ++ D V ++L + GY +LHGGK
Sbjct: 619 QIVEMRAEEDRFLRVLELLGEWYERGKIIIFVASQDKCDQVFRDLLRSGYPCLSLHGGKE 678
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
Q RE ++ F++ N+LVAT VA RG+D+ + V+NYD P ++E Y HR+GRTGRAG
Sbjct: 679 QSDRECTIADFKSDVCNILVATSVAARGLDVSGLRLVVNYDTPNHLEDYVHRVGRTGRAG 738
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL---AKHEASKFKPGTI 657
G A TF++ + DL + + + PVP +L A A K K G +
Sbjct: 739 NKGTAVTFISQEEEKFAPDLVKAMTDAKQPVPSDLRLMADEYAKKKKEGLV 789
>gi|322708721|gb|EFZ00298.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
anisopliae ARSEF 23]
Length = 1245
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/437 (40%), Positives = 254/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L ++ +GY+ P
Sbjct: 582 WVEPAELSALTEEELADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVIDNLGYEKP 641
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+ IQM AIP + RDV+G+A+TGSGKT AF+LPM +I PPI + +GP ++M
Sbjct: 642 TTIQMQAIPTLMSGRDVVGVAKTGSGKTVAFLLPMFRHIMDQPPI---KDTDGPVGLIMT 698
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI + F +G++ V GG I +Q +++G E+++ TPGR+ID L
Sbjct: 699 PTRELATQIHRDCKPFLKSMGLRAVCAYGGAPIRDQIAELKRGAEIIVCTPGRMIDLLAA 758
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + M R +
Sbjct: 759 NQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFAGM-----------------RPDKQ 801
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L++PV +T+G + I Q V + +E+ KF R+ LL E
Sbjct: 802 TILFSATMPRIIDSLTKKVLKSPVEITVGGRSVVAKEIEQIVEVREENTKFLRVLELLGE 861
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ A++FV+ ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 862 LYDRDEDARALIFVDRQEKADDLLKELMVKGYPCMSIHGGKDQVDRDSTISDFKKGVVPL 921
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
LVAT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 922 LVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPDQENCAP 981
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP L
Sbjct: 982 GIAKALEQSEQPVPERL 998
>gi|256074311|ref|XP_002573469.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228919|emb|CCD75090.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 879
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 247/426 (57%), Gaps = 21/426 (4%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ + + RD FR ++ G +PRP+ ++E ++ +++ + +P+PIQ
Sbjct: 48 VRDRSRRDVEEFRSKHKVTVLGHNVPRPLFKFSEAGFPSYIMSVIKKSKWDSPTPIQCQG 107
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L RD++GIA+TGSGKTA+F+LP + + P + +GP +++ PTRELAQ
Sbjct: 108 WPVALSGRDLVGIAQTGSGKTASFLLPAIVHAKAQPSL---KRGDGPIVLILVPTRELAQ 164
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
Q+E+ F + G K + GG S Q + Q EVVIATPGRL+D LE R+ + +
Sbjct: 165 QVEKVAEDFCYSAGFKSACLYGGASRTGQAEALGQSPEVVIATPGRLLDFLESRHTNMRR 224
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
C Y+VLDEADRM+DMGFEP + V+ S ++P+ R T M+SAT P
Sbjct: 225 CTYLVLDEADRMLDMGFEPSIRRVV-----SQVRPD------------RQTLMWSATWPR 267
Query: 462 AVERLARKYLRNPVVVTIG-TAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVF 520
V+ LA +L + + + +G T A I QHV ++ ESEKF RL LL+ + +VF
Sbjct: 268 EVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLLSLLNSFDNARVLVF 327
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
TKK D + + L G+ T +HG K Q++R+ +L+ FR +VLVATDVA RG+DI
Sbjct: 328 TETKKRTDELCQKLQDKGFDATAMHGDKHQKERDRALDMFREGHISVLVATDVASRGLDI 387
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
DV ++INYD P E Y HRIGRTGR+ K G A TF + + +L ++L ++ +
Sbjct: 388 NDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSAKQPRLARELIEVLKEARQTI 447
Query: 641 PPELAK 646
P EL K
Sbjct: 448 PDELFK 453
>gi|15221998|ref|NP_175911.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
gi|75333448|sp|Q9C718.1|RH20_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 20
gi|12321578|gb|AAG50841.1|AC073944_8 ethylene-responsive RNA helicase, putative [Arabidopsis thaliana]
gi|17065338|gb|AAL32823.1| Unknown protein [Arabidopsis thaliana]
gi|22136216|gb|AAM91186.1| unknown protein [Arabidopsis thaliana]
gi|332195071|gb|AEE33192.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
Length = 501
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 270/447 (60%), Gaps = 26/447 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT+ + +R+ I+ +G IP+P++++ + +L V++ G+ P+PIQ P+
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
++ RD+IGIAETGSGKT +++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAH---GDGPIVLVLAPTRELAVQIQ 189
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID +E L + Y
Sbjct: 190 QEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTY 249
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S+++P+ R T +SAT P VE
Sbjct: 250 LVLDEADRMLDMGFDPQIRKIV-----SHIRPD------------RQTLYWSATWPKEVE 292
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+L++K+L NP V IG++ KA I Q V ++ ES+K+++L +LL+++ D + I VF++
Sbjct: 293 QLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLD 352
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L FR+ + ++ ATDVA RG+D+ D
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKD 412
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V P
Sbjct: 413 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSP 472
Query: 643 ELAKHEASKFKP----GTIPDRPPRRN 665
ELA S P G DR RR
Sbjct: 473 ELASMGRSTAPPPPGLGGFRDRGSRRG 499
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 255/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + IFR + I+ KG P+P++ W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 490 LAKMSQDEVNIFRLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQ 549
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 550 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRAL---EEGEGPIAVIMTPTRELA 606
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 607 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 666
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 667 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 709
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E KF +L LL + +
Sbjct: 710 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEENKFLKLLELLGHYQESGS 769
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 770 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 829
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 830 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 889
Query: 637 NSPVPPELAK 646
+ VP +L K
Sbjct: 890 GTAVPHDLEK 899
>gi|356511678|ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine
max]
Length = 774
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/416 (43%), Positives = 244/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R IS G +P P+ ++ ELLR V+ G+ P+PIQ + P+ LQ RD++
Sbjct: 150 YRHRHEISVTGDNVPPPLASFGSTGFPSELLREVQNAGFSAPTPIQAQSWPIALQGRDIV 209
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R S N GP A+V++PTRELA QI++E VKF
Sbjct: 210 AIAKTGSGKTLGYLVPAFIHLKR----SGNNSKMGPTALVLSPTRELATQIQDEAVKFGK 265
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q I +G ++V+ATPGRL D LE R LNQ +Y+VLDEADR
Sbjct: 266 SSRISCACLYGGAPKGPQLRDIDRGADIVVATPGRLNDILEMRRISLNQVSYLVLDEADR 325
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ +P+ R T MF+AT P V ++A L
Sbjct: 326 MLDMGFEPQIRKIVNEVPNR-----------------RQTLMFTATWPKEVRKIAADLLV 368
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
PV V IG + A + I+QHV ++ EK RL+ +L + G K I+F +TKK D
Sbjct: 369 KPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDSGSKI-IIFCSTKKMCD 427
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ +R+ L FRT R VLVATDVA RG+DI D+ V+N
Sbjct: 428 QLARNLTRQ-FGAAAIHGDKSQAERDHVLNQFRTGRSPVLVATDVAARGLDIKDIRVVVN 486
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TG+A TF HD DL ++L +N VPPEL
Sbjct: 487 YDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDHDAKYASDLIKVLEGANQKVPPEL 542
>gi|308807515|ref|XP_003081068.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
gi|116059530|emb|CAL55237.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length = 1030
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/450 (39%), Positives = 253/450 (56%), Gaps = 25/450 (5%)
Query: 197 KLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAE 255
KL + D D ++ D + K++ MT+ R R + + I +G K+P+P++ WA
Sbjct: 275 KLGKVNHDEIDYEPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAH 334
Query: 256 GKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR 315
L+ + + R G++ P PIQ A+P+ + RD IGIA+TGSGKT A++LPML +I+
Sbjct: 335 AGLSGRIHELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAYILPMLRHINA 394
Query: 316 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
P+ +GP ++M PTREL QI +E ++ LG VS+ GG I Q ++
Sbjct: 395 QEPL---KNGDGPIGMIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELK 451
Query: 376 QGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 432
+G E+V TPGR+ID L + L + Y+VLDEADRM DMGFEPQ+ +L +
Sbjct: 452 RGAEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRIL-----A 506
Query: 433 NLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQH 492
NL+P+ R T MFSAT P +E LAR L NPV + IG I Q
Sbjct: 507 NLRPD------------RQTVMFSATFPHTMEALARAALENPVEIQIGGKSVVNSDIDQV 554
Query: 493 VVMMKESEKFSRLQRLLDELGDKT-AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQE 551
V + E ++F R+ LL E ++ I+FV ++ AD K L K GY +LHG K Q
Sbjct: 555 VEIRPEEDRFLRVLELLGEWCERGKIIIFVASQDKADSTFKELLKSGYPCLSLHGSKEQS 614
Query: 552 QREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKT 611
R ++ F++ N+LVAT VA RG+D+ D+ VINYD P ++E Y HR+GRTGRAG+
Sbjct: 615 DRHSTISDFKSDVCNILVATSVAARGLDVKDLRLVINYDTPNHLEDYVHRVGRTGRAGQK 674
Query: 612 GVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
G A TF++ + DL + L S VP
Sbjct: 675 GTAVTFISEDEEKFAPDLVKALKDSKQTVP 704
>gi|357126556|ref|XP_003564953.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like
[Brachypodium distachyon]
Length = 496
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 260/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT + +R I+ G +P+P+ ++ + +L+ + + G+ P+PIQ P+
Sbjct: 67 MTADEVEAYRRRREITVDGHDVPKPVCDFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 126
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 127 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 183
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+ET KF IK I GG Q +++G E+VIATPGRLID +E + L + Y
Sbjct: 184 QETTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTY 243
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 244 LVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPKEVE 286
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR +L +P V IG+ KA I Q+V ++ ES+K+++L LL+++ D + I +F++
Sbjct: 287 QLARNFLFDPYKVIIGSEELKANHAICQYVEILSESQKYNKLVNLLEDIMDGSRILIFMD 346
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 347 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 406
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG TG A TF T + DL +L+++ V P
Sbjct: 407 VKYVINYDFPGSLEDYVHRIGRTGRAGATGTAYTFFTAANARFAKDLINILVEAGQKVSP 466
Query: 643 ELA 645
ELA
Sbjct: 467 ELA 469
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 263/442 (59%), Gaps = 25/442 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
Y++F+ D + + + M + + + I G +PRP++N+A+ L+ A
Sbjct: 171 YESFNK--DFYEEKPSISGMNAEEVADYMKSLAIRVSGFDVPRPVKNFADCGFPVPLMNA 228
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + GY+ P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E
Sbjct: 229 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE--- 285
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELA QI E KFA ++V ++ GG S +Q ++ GCE+V+ATP
Sbjct: 286 EGPIGVICAPTRELAHQIYLEAKKFAKPYNLQVAAVYGGVSKFDQFKELKAGCEIVVATP 345
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 346 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD-------- 392
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSR 504
R T +FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ ++EK
Sbjct: 393 ----RQTLLFSATMPYKVERLAREILSDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPW 448
Query: 505 L-QRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L +++ + D +VF K D + L++ G++V LHG K Q R +L+ F++
Sbjct: 449 LIEKMPGMIDDGDVLVFAAKKARVDEIENQLNQRGFKVAALHGDKDQASRMETLQNFKSG 508
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHD 622
Y+VLVATDVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T +
Sbjct: 509 TYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 568
Query: 623 TDVFYDLKQMLIQSNSPVPPEL 644
T +L LI + VP EL
Sbjct: 569 TRFAGELVHSLIAAGQDVPNEL 590
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/442 (40%), Positives = 262/442 (59%), Gaps = 25/442 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YD F D + + + M++++ + + I G +PRP++N+ + L+ A
Sbjct: 176 YDAFTK--DFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFQDCGFPVPLMNA 233
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + Y+ P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E
Sbjct: 234 IAKQAYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE--- 290
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELA QI E KFA ++V ++ GG S +Q ++ GCEVVIATP
Sbjct: 291 EGPIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATP 350
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 351 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD-------- 397
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS- 503
R T +FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ + EK
Sbjct: 398 ----RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPW 453
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L++L + D +VF + K D + K L++ G+R+ LHG K Q R +L+ F++
Sbjct: 454 LLEKLPGMIDDGDVLVFASKKARVDEIEKELNQRGFRIAALHGDKDQASRMETLQKFKSG 513
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHD 622
Y+VLVATDVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T +
Sbjct: 514 TYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 573
Query: 623 TDVFYDLKQMLIQSNSPVPPEL 644
+L LI + VP EL
Sbjct: 574 ARFAGELVHSLIAAGQDVPNEL 595
>gi|126632201|gb|AAI33101.1| Ddx46 protein [Danio rerio]
Length = 1032
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/411 (41%), Positives = 245/411 (59%), Gaps = 24/411 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
IS KG P+P++ W + ++ ++L A+++ Y+ P+PIQ AIP + RD+IGIA+T
Sbjct: 341 GISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKT 400
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPM +I P+ EAEGP AV+M PTRELA QI +E KF+ L ++
Sbjct: 401 GSGKTIAFLLPMFRHILDQRPV---GEAEGPLAVIMTPTRELALQITKECKKFSKSLALR 457
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
VV + GG I EQ +++G E+++ TPGR+ID L R L + YVV+DEADRM
Sbjct: 458 VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMF 517
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ ++D N++P+ R T MFSAT P +E LAR+ L P
Sbjct: 518 DMGFEPQVMRIVD-----NVRPD------------RQTVMFSATFPRTMEALARRILSKP 560
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKN 533
V V +G + QHV++++E +KF +L +L +K + I+FV+ +++AD + K+
Sbjct: 561 VEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKD 620
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L K Y +LHGG Q R+ + F+ +LVAT VA RG+D+ + V+NY P
Sbjct: 621 LMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPN 680
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ E Y HR GRTGRA G A TF+T D+ + L S S VP EL
Sbjct: 681 HYEDYVHRAGRTGRARNKGYAYTFITEGQARYSGDILKALELSGSSVPAEL 731
>gi|115474897|ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|29467560|dbj|BAC66730.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|37806159|dbj|BAC99664.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113623014|dbj|BAF22959.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|218200507|gb|EEC82934.1| hypothetical protein OsI_27901 [Oryza sativa Indica Group]
gi|222639953|gb|EEE68085.1| hypothetical protein OsJ_26125 [Oryza sativa Japonica Group]
Length = 1049
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 259/444 (58%), Gaps = 27/444 (6%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + +M + +R+ + G +P+P++ W + LT +LL ++++G++ P IQ
Sbjct: 393 KDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQA 452
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML ++ P + +GP ++MAPTREL
Sbjct: 453 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVP---GDGPIGLIMAPTREL 509
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QI + KF+ LGI V+I GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 510 VVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 569
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + ++V+DEADRM DMGFEPQ+ ++ N +P+ R T +FS
Sbjct: 570 TNLRRVTFLVMDEADRMFDMGFEPQITRIV-----QNTRPD------------RQTVLFS 612
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + E+E+F RL LL E DK
Sbjct: 613 ATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFRLLELLGEWFDKG 672
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV+++ D + K+L + GY +LHGGK Q RE +L F++ ++L+AT VA
Sbjct: 673 KILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAA 732
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ V+NYD+P + E Y HR+GRTGRAG+ G A TF++ + DL + L
Sbjct: 733 RGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKALEL 792
Query: 636 SNSPVPPE---LAKHEASKFKPGT 656
S VP + LA +K K GT
Sbjct: 793 SEQAVPEDLKGLADRFMAKVKQGT 816
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 254/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M+ + I R + I+ KG P+P+++W + ++ ++L ++ + GY+ P+PIQ
Sbjct: 284 LAKMSLEEVNIMRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLRKHGYEKPTPIQTQ 343
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 344 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 400
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 401 LQITKECKKFSKALGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 460
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 461 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 503
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L PV V +G + Q V++++E KF +L LL + +
Sbjct: 504 TFPRAMEALARRILNKPVEVQVGGRSVVCSDVEQQVIVIEEENKFLKLLELLGHYQESGS 563
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F++ +LVAT VA R
Sbjct: 564 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKSGTCKLLVATSVAAR 623
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 624 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGHAFTFITEDQARYAGDIIKALELS 683
Query: 637 NSPVPPELAK 646
+ VP +L K
Sbjct: 684 GTAVPADLEK 693
>gi|356522500|ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 261/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT+ + +R+ I+ +G IP+P++++ + ++ + + G+ P+PIQ P+
Sbjct: 75 MTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAGFTEPTPIQSQGWPM 134
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P + N +GP +V+APTRELA QI+
Sbjct: 135 ALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPIL---NPGDGPIVLVLAPTRELAVQIQ 191
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID LE + L + Y
Sbjct: 192 QEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTY 251
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 252 LVLDEADRMLDMGFDPQLRKIV-----SQIRPD------------RQTLYWSATWPKEVE 294
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LARK+L NP V IG++ KA I Q+V ++ E +K+ +L +LL+++ D + I +F++
Sbjct: 295 QLARKFLYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMD 354
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 355 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 414
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A T+ T + +L +L ++ V P
Sbjct: 415 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSP 474
Query: 643 ELA 645
ELA
Sbjct: 475 ELA 477
>gi|290994831|ref|XP_002680035.1| ATP-dependent RNA helicase [Naegleria gruberi]
gi|284093654|gb|EFC47291.1| ATP-dependent RNA helicase [Naegleria gruberi]
Length = 629
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 250/418 (59%), Gaps = 26/418 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G I P+ + E L P+L++ +ER G+ P+P+Q +IP+ L RD++
Sbjct: 136 EDIPVKVTGKDIIPPIAAFKEANLPPKLMQNIERAGFGKPTPVQKHSIPIVLAGRDLLSC 195
Query: 295 AETGSGKTAAFVLPMLTYISRLP--------PISEENEAEGPYAVVMAPTRELAQQIEEE 346
A+TGSGKT AF+ P+++ + P P + P ++MAPTREL+ QI +E
Sbjct: 196 AQTGSGKTCAFLFPIISNLMTQPGYETVMPHPELMDTLVTCPSVLIMAPTRELSTQIYDE 255
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
+ KF ++ G + V GG +I+ Q ++ +GC++++ATPGRL+D ++R L+ Y+V
Sbjct: 256 SRKFTYHTGRRTVVAYGGAAIQYQLKQLERGCDILVATPGRLVDLIDRGSISLHNVQYLV 315
Query: 407 LDEADRMIDMGFEPQVVGVLD--AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
LDEADRM+DMGFEPQ+ +++ MP+ R T MFSAT P ++
Sbjct: 316 LDEADRMLDMGFEPQIRYIVEKTGMPAPG---------------QRITLMFSATFPKNIQ 360
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
LAR +L N + +T+G G E I Q V K+ EK + + + + +VFV TK
Sbjct: 361 TLARDFLHNNLNLTVGRVGSTHENILQKFVYCKDDEKRDLMLEAIASV-ETLTLVFVKTK 419
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K A ++ L K G++ +++HG K+Q +RE +LE FR +LVATDVA RG+DI DV
Sbjct: 420 KEASILEYFLMKNGFKSSSIHGDKTQRERETALENFRRGITPILVATDVASRGLDINDVG 479
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
HVINYD+P NIE Y HRIGRTGRAG TG++T+F T + + DL +L ++ VPP
Sbjct: 480 HVINYDLPENIEDYVHRIGRTGRAGNTGISTSFFTDKNNQIADDLITVLEEAKQEVPP 537
>gi|380022024|ref|XP_003694855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
florea]
Length = 713
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 165/393 (41%), Positives = 242/393 (61%), Gaps = 25/393 (6%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + ++E+ I KG P+P+++WA+ +T + L ++++GY+ P+PIQ AIP
Sbjct: 341 MTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIP 400
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF+LPM +I PP+++ +GP A++M PTREL QI
Sbjct: 401 AIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLAD---GDGPIALIMTPTRELCMQI 457
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
++ KF LG+ V + GG I EQ +++G E+++ TPGR+ID L R L
Sbjct: 458 GRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 517
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ YVVLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 518 RVTYVVLDEADRMFDMGFEPQVMRIME-----NVRPD------------RQTVLFSATFP 560
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LAR+ L PV V +G + + QHVV+++E +KF +L +L DK +AI+
Sbjct: 561 RQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLEEDQKFYKLLEILGHYQDKGSAII 620
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ R +LVAT VA RG+D
Sbjct: 621 FVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLVATSVAARGLD 680
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
+ + V+NYD P + E Y HR GRTGRAG G
Sbjct: 681 VKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKG 713
>gi|429848197|gb|ELA23711.1| pre-mRNA-processing atp-dependent rna helicase prp5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1165
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 180/468 (38%), Positives = 264/468 (56%), Gaps = 34/468 (7%)
Query: 206 YDTFDMRVDRH--WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D++ R W E +L +TE + R + + I G +PRP++ WA+ LT +
Sbjct: 518 YSKLDLQPIRKNFWVEPAELAALTEAEANDLRLELDGIKVSGKDVPRPVQKWAQCGLTRQ 577
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
L V +GY+ P+ IQM A+P+ + RDV+G+A+TGSGKT AF+LPM +I PPI
Sbjct: 578 TLDVVADLGYEKPTSIQMQALPVIMSGRDVVGVAKTGSGKTVAFLLPMFRHIMDQPPI-- 635
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+ +GP ++M PTRELA QI + F +G++ V GG I +Q +++G E+V
Sbjct: 636 -KDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRAVCAYGGAPIRDQIAELKRGAEIV 694
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+ID L + R L + +YVVLDEADRM DMGFEPQV+ + +N++P+
Sbjct: 695 VCTPGRMIDLLAANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD- 748
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
R T +FSATMP ++ L +K L++PV +T+G I+Q V ++ E
Sbjct: 749 -----------RQTILFSATMPRIIDSLTKKVLKSPVEITVGGRSVVAPDITQKVEVIPE 797
Query: 499 SEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
KF L LL EL D+ ++FV ++ AD + K L GY ++HGGK Q R+
Sbjct: 798 DAKFVHLLGLLGELYDEDEDARTLIFVERQEKADDLLKELMVKGYPCMSIHGGKDQIDRD 857
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F+ +L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG G A
Sbjct: 858 STIADFKKGIVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNKGTA 917
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPP---ELAKHEASKFKPGTIPD 659
TF+T + + + L QS P+P E+ K K K G D
Sbjct: 918 VTFITEEQENCAPGIAKALEQSGQPIPDRLNEMRKAHKDKVKAGKAKD 965
>gi|76154315|gb|AAX25805.2| SJCHGC01053 protein [Schistosoma japonicum]
Length = 291
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/289 (56%), Positives = 199/289 (68%), Gaps = 9/289 (3%)
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI- 448
D LE RY VLNQC Y+VLDEAD+MIDMGFEP+V +L +P +N KP+NED E D K +
Sbjct: 1 DVLENRYMVLNQCTYIVLDEADKMIDMGFEPEVNNILTYLPVTNEKPDNEDAEDDSKLLS 60
Query: 449 -------YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
YR T MF+ATMPPAVERLAR YLR P +V IG+AGK TE + Q V M+ E EK
Sbjct: 61 NFATKHKYRQTVMFTATMPPAVERLARSYLRRPAMVYIGSAGKPTERVEQIVYMVSEQEK 120
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
+L +L D I+FVN KK AD++AK L+KLGY LHGGK QEQRE +L +
Sbjct: 121 RRKLLEILAAGLDPPVIIFVNQKKGADVLAKGLEKLGYSAVVLHGGKGQEQREYALASLK 180
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+ + +LVATDVAGRGIDI DV+ VINYDM I+ Y HRIGRTGRAGK+G+A + LT
Sbjct: 181 SGQKEILVATDVAGRGIDIKDVSMVINYDMSKTIDEYVHRIGRTGRAGKSGIAISLLTKE 240
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
D VFYDLKQ+LIQS S P ELA H ++ KPG + + R +TV+
Sbjct: 241 DAPVFYDLKQLLIQSPVSTCPHELANHPDAQTKPGVLAAKKRRAEETVY 289
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/426 (41%), Positives = 258/426 (60%), Gaps = 23/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
L M+E++ + + I G +PR ++++A+ +L+ A+ + GY+ P+ IQ A
Sbjct: 202 LAGMSEQEVADYMKSLAIRVSGFDVPRSIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQA 261
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP VV APTRELA
Sbjct: 262 LPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE---EGPIGVVCAPTRELAH 318
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI E KFA ++V ++ GG S +Q ++ GCE+VIATPGRLID L+ + + +
Sbjct: 319 QIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFR 378
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T +FSATMP
Sbjct: 379 ATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTLLFSATMPY 421
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDELGDKTAIV 519
VERLAR+ L +P+ VT+G G A E I Q V V++ ++EK L++L + D +V
Sbjct: 422 KVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLLSDAEKMPWLLEKLPGMIDDGDVLV 481
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F K D + L++ G+R+ LHG K Q R +L+ F++ Y+VLVATDVA RG+D
Sbjct: 482 FAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLD 541
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
I + V+N+D+ ++M+ HRIGRTGRAG K G A T +T + +L LI +
Sbjct: 542 IKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELVHCLIAAGQ 601
Query: 639 PVPPEL 644
VP EL
Sbjct: 602 DVPNEL 607
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 180/442 (40%), Positives = 262/442 (59%), Gaps = 25/442 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
YD F D + + + M++++ + + +I G +PRP++N+ + L+ A
Sbjct: 176 YDAFTK--DFYEEKPSISGMSDQEVTDYMKSLSIRVSGFDVPRPIKNFEDCGFHVPLMNA 233
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ + Y+ P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E
Sbjct: 234 IAKQAYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE--- 290
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
EGP V+ APTRELA QI E KFA ++V +I GG S +Q ++ GCE+VIATP
Sbjct: 291 EGPIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAIYGGVSKFDQFKELKAGCEIVIATP 350
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
GRLID L+ + + + Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 351 GRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD-------- 397
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS- 503
R T +FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ + EK
Sbjct: 398 ----RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGGANEDIKQVVNVLPSDVEKMPW 453
Query: 504 RLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
L +L + D +VF + K D + K L++ G+R+ LHG K Q R +L+ F++
Sbjct: 454 LLGKLPGMIDDGDVLVFASKKARVDEIEKELNQRGFRIAALHGDKDQASRMETLQKFKSG 513
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHD 622
++VLVATDVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T +
Sbjct: 514 TFHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 573
Query: 623 TDVFYDLKQMLIQSNSPVPPEL 644
+L LI + VP EL
Sbjct: 574 AHFAGELVHSLIAAGQDVPNEL 595
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 198/504 (39%), Positives = 280/504 (55%), Gaps = 37/504 (7%)
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEG----VEEKPEEAAALKLKEEAADLY 206
L AG D E+ AAK + E + +E+K EA A L D Y
Sbjct: 134 LAAEALHAGYDTDEEVYAAAKAVDNGQIEYDSDDNAIVTLEKKKIEALA-PLDHNDVD-Y 191
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ F D + + MTE + +R I G + RP++ + + L+ A+
Sbjct: 192 EKFSK--DFYEESDSISGMTEEEVAAYRNSLAIRVSGFDVSRPVKTFEDLGFDASLMGAI 249
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
+ GY+ P+PIQ + P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P E + E
Sbjct: 250 SKQGYERPTPIQCQSCPIVLSGRDLIGIAKTGSGKTAAFVLPMMVHIMDQP---ELGKGE 306
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPG 386
GP V+ APTRELAQQI E KFA GI++ + GG S EQ ++ GCEVV+ATPG
Sbjct: 307 GPIGVICAPTRELAQQIYSEAKKFAKVHGIRISGVYGGMSKFEQFKELKAGCEVVVATPG 366
Query: 387 RLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK 446
RLID ++ + +++ Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 367 RLIDMIKMKALSMHRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD--------- 412
Query: 447 RIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEK---- 501
R T +FSATMP VERLAR+ L +P+ VT+G G A E I+Q V V+ ++EK
Sbjct: 413 ---RQTLLFSATMPKRVERLAREILTDPIRVTVGEIGSANEDITQVVTVLPSDAEKTPWL 469
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
RLQ +D D +VF +TK + + + + G++V LHG K Q R L+ F+
Sbjct: 470 LDRLQPFVD---DGDVLVFASTKLRVEELEGKISEAGFKVAALHGDKDQATRMEVLQKFK 526
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTF 620
Y++LVATDVA RG+DI + V+N D+ +++ + HRIGRTGRAG K GVA T +T
Sbjct: 527 NGIYHILVATDVAARGLDIKSIKTVVNVDIARDMDSHVHRIGRTGRAGDKDGVAHTLVTG 586
Query: 621 HDTDVFYDLKQMLIQSNSPVPPEL 644
+ +L LI + VP EL
Sbjct: 587 KEARFAGELVNSLIAAGQNVPTEL 610
>gi|224134991|ref|XP_002327540.1| predicted protein [Populus trichocarpa]
gi|222836094|gb|EEE74515.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 262/431 (60%), Gaps = 22/431 (5%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
H + M+ERD +R I+ +G +P+P++++ + +L+ + + G+ P+
Sbjct: 56 HVESPSVAAMSERDVEEYRLRREITVEGRDVPKPVKSFHDVGFPDYVLQEISKAGFTEPT 115
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAP 335
PIQ P+ L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+AP
Sbjct: 116 PIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIIHVNAQPFLAP---GDGPIVLVLAP 172
Query: 336 TRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
TRELA QI++E KF IK I GG Q +++G E+VIATPGRLID +E
Sbjct: 173 TRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH 232
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMF 455
+ L + Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +
Sbjct: 233 HTNLRRVTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLYW 275
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGD 514
SAT P VE+LAR+ L NP V IG+ KA I QHV ++ E++K+++L +LL+++ D
Sbjct: 276 SATWPKEVEQLARQSLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMD 335
Query: 515 KTAI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
+ I +F++TKK D + + L G+ ++HG KSQ +R+ L F+ + ++ ATDV
Sbjct: 336 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 395
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ DV +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L
Sbjct: 396 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAGNARFAKELVTIL 455
Query: 634 IQSNSPVPPEL 644
++ V PEL
Sbjct: 456 EEAGQKVSPEL 466
>gi|224135925|ref|XP_002322195.1| predicted protein [Populus trichocarpa]
gi|222869191|gb|EEF06322.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 259/444 (58%), Gaps = 22/444 (4%)
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
D D + ++ + M+E + FR I+ +G +PRP+R + E L
Sbjct: 21 DFGDLVPFEKNLYFENPSIRAMSEHEVVTFRARREITVEGHDVPRPIRIFHEANFPDYCL 80
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 323
+ + ++G+ P+PIQ P+ L+ RD+IGIAETGSGKT A++LP +++ P +
Sbjct: 81 QVIAKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAFVHVAAQPRLVH-- 138
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
+GP +V+APTRELA QI+EE +KF I+ I GG Q +++G E+VIA
Sbjct: 139 -GDGPIVLVLAPTRELAVQIQEEALKFGSKANIRSTCIYGGAPKGPQIRDLQRGVEIVIA 197
Query: 384 TPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEEL 443
TPGRLID L ++ L + Y+VLDEADRM+DMGFEPQ+ ++ S ++P+
Sbjct: 198 TPGRLIDMLGAQHVNLRRVTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------ 246
Query: 444 DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKF 502
R T +SAT P VE LAR +L NP V IG+ KA + I Q V +M + EK+
Sbjct: 247 ------RQTLYWSATWPREVEALARHFLHNPYKVIIGSQDLKANQSIKQVVEVMMDLEKY 300
Query: 503 SRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
RL +LL E+ D + I +F+ TKK D V + L G+ ++HG K+Q +R+ L F+
Sbjct: 301 KRLIKLLKEVMDGSRILIFMETKKGCDQVTRQLRMDGWAALSIHGDKNQAERDWVLAEFK 360
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+ R ++ ATDVA RG+D+ D+ V+NYD P ++E Y HRIGRTGRAG G A TF T
Sbjct: 361 SGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGARGTALTFFTES 420
Query: 622 DTDVFYDLKQMLIQSNSPVPPELA 645
+ DL ++L ++ VPP L+
Sbjct: 421 NAKFARDLIKILQEAGQIVPPSLS 444
>gi|49072840|gb|AAT51707.1| DEAD box RNA helicase [Choristoneura fumiferana]
Length = 1012
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 255/430 (59%), Gaps = 29/430 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L M+ + +R + I KG P+P+R WA ++ + + ++++ ++ P+PIQ
Sbjct: 321 LARMSPEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGVSKKEMDILKKLNFEKPTPIQAQ 380
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM ++ P+ + +GP +++M PTREL
Sbjct: 381 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQSPL---EDTDGPISLIMTPTRELC 437
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KFA LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 438 MQIGKDIRKFAKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 497
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + +Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 498 NLRRVSYIVLDEADRMFDMGFEPQVMKIID-----NIRPD------------RQTVMFSA 540
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ + +G + + QHV ++++ KF +L LL +LG
Sbjct: 541 TFPRQMEALARRILQKPIEIQVGGRSVVCKDVEQHVAILEDDAKFFKLLELLGLYSQLG- 599
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ + +LVAT VA
Sbjct: 600 -SIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVA 658
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ + V+NYD P + E Y HR GRTGRAG G A TFLT D+ + +
Sbjct: 659 ARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTPEQGRYAGDVLRAME 718
Query: 635 QSNSPVPPEL 644
S + VPP L
Sbjct: 719 LSGAVVPPTL 728
>gi|148906344|gb|ABR16327.1| unknown [Picea sitchensis]
Length = 504
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/436 (40%), Positives = 259/436 (59%), Gaps = 22/436 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ MTE + R +R I+ G +P+P++N+ + ++ + + G+ P+PIQ
Sbjct: 70 IASMTEDEVREYRNRREITIDGRDVPKPVKNFGDAGFPDYVIEEIVKAGFTEPTPIQAQG 129
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA
Sbjct: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPYLAP---GDGPIVLVLAPTRELAV 186
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI++E KF IK I GG Q + +G E+VIATPGRLID LE ++ L +
Sbjct: 187 QIQQEAAKFGASSKIKNTCIYGGAPKGPQVRDLSKGVEIVIATPGRLIDMLESQHTNLRR 246
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P
Sbjct: 247 VTYLVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPK 289
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT-AIV 519
VE LAR+ L NP V IG++ KA I Q V ++ E EK++RL +LL+E+ D + ++
Sbjct: 290 EVELLARQSLHNPYKVIIGSSDLKANHAIEQIVEIVSEHEKYTRLIQLLEEIMDGSRLLI 349
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F+ TKK D V + L G+ ++HG KSQ +R+ L F+ + ++ ATDVA RG+D
Sbjct: 350 FLETKKGCDQVTRKLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLD 409
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ VINYD PG++E Y HRIGRTGRAG G A T+ T + DL ++L ++
Sbjct: 410 VKDIKCVINYDFPGSMEDYVHRIGRTGRAGAKGTAYTYFTAANARFARDLIKILEEAGQS 469
Query: 640 VPPELAKHEASKFKPG 655
+ P LA+ S G
Sbjct: 470 ISPSLAEMGRSSAASG 485
>gi|340521284|gb|EGR51519.1| predicted protein [Trichoderma reesei QM6a]
Length = 1247
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 266/468 (56%), Gaps = 34/468 (7%)
Query: 206 YDTFDMRVDRH--WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D++ R W E +L ++E + R + + I G +P+P++ W++ LT +
Sbjct: 569 YSKLDLQPIRKNFWVEPAELSNLSEAEVADLRMELDGIKVNGKDVPKPVQKWSQCGLTRQ 628
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
L + +G+ P+PIQM A+P + RDV+G+A+TGSGKT AF+LPM +I P+
Sbjct: 629 TLDVISSLGFDKPTPIQMQALPALMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPL-- 686
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+ +GP ++M PTRELA QI + F + ++ V GG I EQ +++G E++
Sbjct: 687 -KDTDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIREQIAELKRGAEII 745
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+ID L + R L + YVVLDEADRM DMGFEPQV+ + +N++P+
Sbjct: 746 VCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD- 799
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
R T +FSATMP ++ L +K L++P+ +T+G + I+Q V + +E
Sbjct: 800 -----------RQTILFSATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEITQIVEVREE 848
Query: 499 SEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
+ KF R+ LL EL DK ++FV ++ AD + K L + GY ++HGGK Q R+
Sbjct: 849 NTKFLRVLELLGELYDKDEDARTLIFVERQEKADDLLKELMQKGYPCMSIHGGKDQVDRD 908
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F+ +L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A
Sbjct: 909 STISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTA 968
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPP---ELAKHEASKFKPGTIPD 659
TF+T + + + L QS+ PVP E+ K K K G D
Sbjct: 969 VTFVTPEQENCAPGIAKALEQSDQPVPERLNEMRKSHREKVKSGKAKD 1016
>gi|297847866|ref|XP_002891814.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
gi|297337656|gb|EFH68073.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
Length = 501
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 270/447 (60%), Gaps = 26/447 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT+ + +R+ I+ +G IP+P++++ + +L +++ G+ P+PIQ P+
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQGWPM 132
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
++ RD+IGIAETGSGKT +++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 133 AMKGRDLIGIAETGSGKTISYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 189
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID +E L + Y
Sbjct: 190 QEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTY 249
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S+++P+ R T +SAT P VE
Sbjct: 250 LVLDEADRMLDMGFDPQIRKIV-----SHIRPD------------RQTLYWSATWPKEVE 292
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+L++K+L NP V IG++ KA I Q V ++ ES+K+++L +LL+++ D + I VF++
Sbjct: 293 QLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLD 352
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L FR+ + ++ ATDVA RG+D+ D
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKD 412
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V P
Sbjct: 413 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELSNILEEAGQKVSP 472
Query: 643 ELAKHEASKFKP----GTIPDRPPRRN 665
ELA S P G DR RR
Sbjct: 473 ELASMGRSTAPPPPGLGGFRDRGSRRG 499
>gi|452820850|gb|EME27887.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 1885
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 288/507 (56%), Gaps = 49/507 (9%)
Query: 168 LAAKNEKEMRE----EIRKKEG--VEEKPEEAAALK-LKEEAADLYDTFDMRVDRHWSE- 219
++ KNEKE ++ ++ ++E +E+ ++ ALK + E A +++ T +R W+
Sbjct: 71 ISHKNEKETQDSKVNQLAEEEAKIIEDWTDQRRALKAVGEIAKNIHYTEPIRTS--WNPP 128
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K LEE++ W+ R+ + +S +G +IP + E K + A++ + K P+PIQM
Sbjct: 129 KYLEELSAVQWQTLRQKYGVSVEGEEIPPMCFTFREMKFPKPIRTALKEMKVKRPTPIQM 188
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAP 335
+P+ L RD+IGIA TGSGKT AF+LP++ +LP I EGP +++ P
Sbjct: 189 QGLPVALTGRDLIGIASTGSGKTLAFLLPLVMMAWEAERKLPLIP----GEGPLGLIICP 244
Query: 336 TRELAQQIEEETVKFAHYL----GIKVVSI--VGGQSIEEQGFRIRQGCEVVIATPGRLI 389
+RELA+QI + T F ++ G + SI +GG SI EQ + +G + +ATPGRL
Sbjct: 245 SRELARQIYDNTECFVRHIQSFDGTTIRSILAIGGVSIHEQLEIMSEGVHICVATPGRLH 304
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
D L+R+ L C +V LDEADR+ID+GFE + G+ D S
Sbjct: 305 DLLKRKKLHLESCRFVCLDEADRLIDLGFEEDIRGIFDFFVSQ----------------- 347
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL 509
R + MFSATMP ++ AR L NP++V +G AG A + Q V + + K RL L
Sbjct: 348 RQSLMFSATMPKKIQSFARTALVNPILVNVGRAGAANINVIQEVEYVNQDAKIGRLLECL 407
Query: 510 DELGDKTA---IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
KTA ++F K + D V + L G +HGGK QE+R+ ++E FR + +
Sbjct: 408 Q----KTAPPVLIFCENKNDVDDVHEYLLLKGVYAAAIHGGKDQEERQKAVEDFRKGKKD 463
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL-TFHDTDV 625
VLVATD+A +G+D P+V HVINYDMP +IE Y HRIGRTGR GKTG+ATTF+ + + V
Sbjct: 464 VLVATDIAAKGLDFPEVQHVINYDMPKDIEDYVHRIGRTGRRGKTGLATTFVNSTCNMSV 523
Query: 626 FYDLKQMLIQSNSPVPPELAKHEASKF 652
DLK++LI++ V P L + F
Sbjct: 524 LLDLKELLIEAKQKVAPFLENLDVHNF 550
>gi|440632990|gb|ELR02909.1| hypothetical protein GMDG_01131 [Geomyces destructans 20631-21]
Length = 1194
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 252/431 (58%), Gaps = 28/431 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MTE R + + I G +P P++ W++ L + L ++R+GY+ P+ IQM
Sbjct: 529 LAGMTEAALADLRLELDGIKVSGKNVPIPVQKWSQCGLNIQSLDVIKRLGYERPTAIQMQ 588
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P + RDVIG+A+TGSGKT AF+LPM +I PP+ ++GP ++M PTRELA
Sbjct: 589 ALPAIMSGRDVIGVAKTGSGKTMAFMLPMFRHIRDQPPL---EGSDGPIGLIMTPTRELA 645
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F + ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 646 TQIHKEAKPFLKSMNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVT 705
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ + +N++P R T MFSA
Sbjct: 706 NLRRVTYVVLDEADRMFDMGFEPQVMKIF-----ANIRPN------------RQTIMFSA 748
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT- 516
TMP ++ LA+K L +PV +T+G I+Q V + +E +KF RL LL EL DK
Sbjct: 749 TMPRIMDALAKKTLNDPVEITVGGRSVVAPEITQIVEVREEDDKFIRLLELLGELYDKDE 808
Query: 517 ---AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
+VFV+ ++ AD + K+L + GY ++HGGK Q R+ +++ F+ +++AT V
Sbjct: 809 DARTLVFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGVTPIMIATSV 868
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T + + L
Sbjct: 869 AARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITGDQEQYSVGISKAL 928
Query: 634 IQSNSPVPPEL 644
QS PVP L
Sbjct: 929 EQSGQPVPDRL 939
>gi|224083374|ref|XP_002307002.1| predicted protein [Populus trichocarpa]
gi|222856451|gb|EEE93998.1| predicted protein [Populus trichocarpa]
Length = 895
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 251/429 (58%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ MT + +R+ + G +P+P++ W + LT ++L ++++ Y+ P IQ
Sbjct: 224 KEILRMTPEEVTAYRKLLELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKPMTIQA 283
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML +I PP+ EGP ++MAPTREL
Sbjct: 284 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEA---GEGPIGLIMAPTREL 340
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RY 396
QQI + KF LGI+ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 341 VQQIHSDIRKFTKALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKI 400
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+++ T +FS
Sbjct: 401 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPDHQ------------TVLFS 443
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + E E++ RL LL +K
Sbjct: 444 ATFPRQVETLARKVLNKPVEIQVGGRSVVNKDINQLVEVRPEGERWFRLLELLGVWSEKG 503
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV ++ D + ++L K G+ +LHG K Q RE ++ F++ N+L+AT VA
Sbjct: 504 KILVFVQSQDKCDALFRDLLKFGHPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAA 563
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+ VINYD+P + E Y HR+GRTGRAG+ G A TF + D DL + L
Sbjct: 564 RGLDVKDLELVINYDVPNHYEDYVHRVGRTGRAGRKGCAITFFSEDDARYAPDLVKALEL 623
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 624 SEQVVPQDL 632
>gi|6735368|emb|CAB68189.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 603
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 257/420 (61%), Gaps = 25/420 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +A+ L L + R Y P+P+Q AIP+ L +RD++
Sbjct: 135 EDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMAC 194
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEE--NEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + A P+AV+++PTRELA QI +E KF++
Sbjct: 195 AQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSY 254
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +GC++++ATPGRL D LER + ++ LDEADR
Sbjct: 255 QTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA ++
Sbjct: 315 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTMLFSATFPSQIQRLAADFMS 361
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKTAIVFVNTKKNADM 529
N + + +G G +T+LI+Q V ++ES+K S L LL E DKT K+ AD
Sbjct: 362 NYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKT-------KRGADT 414
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+ L + T++HG ++Q++RE++L F+T R +LVATDVA RG+DIP VAHV+N+
Sbjct: 415 LENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNF 474
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
D+P +I+ Y HRIGRTGRAGK+G+AT F ++ + L +++ ++N VP L ++ +
Sbjct: 475 DLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRYAS 534
>gi|297817170|ref|XP_002876468.1| hypothetical protein ARALYDRAFT_486308 [Arabidopsis lyrata subsp.
lyrata]
gi|297322306|gb|EFH52727.1| hypothetical protein ARALYDRAFT_486308 [Arabidopsis lyrata subsp.
lyrata]
Length = 639
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 255/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L ++R Y P+P+Q AIP+ RD++
Sbjct: 121 EDIPIETSGDNVPPPVNTFAEIDLGEVLNLNIQRCKYVKPTPVQRNAIPILAAGRDLMAC 180
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + I G P AV+++PTRELA QI +E KF++
Sbjct: 181 AQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 240
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG + +Q + +G ++++ATPGRL D LER L ++ LDEADR
Sbjct: 241 QTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVKFLALDEADR 300
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 301 MLDMGFEPQIRKIVQQM---DMPPPG----------VRQTMLFSATFPREIQRLASDFLS 347
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDK----TAIVFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL E G++ +VFV TKK
Sbjct: 348 NYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKK 407
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ TT+HG +SQ++RE++L F+T R +LVATDVA RG+DIP VAH
Sbjct: 408 GADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAH 467
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAG +G+AT F ++T + L +++ ++N VP L
Sbjct: 468 VVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTSMAKPLAELMQEANQEVPDWLT 527
Query: 646 KHEA 649
++ +
Sbjct: 528 RYAS 531
>gi|440804129|gb|ELR25007.1| DEAD/DEAH box helicase domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 597
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 170/424 (40%), Positives = 259/424 (61%), Gaps = 31/424 (7%)
Query: 235 EDFNISYKGSKIPRPMRN-WAEGKLT-PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+D + G+ P P+ + +++G L P ++R +E GY P+P+Q AIP+ Q RD++
Sbjct: 123 DDIPVDATGNDCPTPLDSKFSDGDLLDPIVMRNIELSGYDKPTPVQKYAIPIVGQGRDLM 182
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG---------------PYAVVMAPTR 337
A+TGSGKTAAF+LP+++ + + PP S P+A+V+APTR
Sbjct: 183 ACAQTGSGKTAAFLLPIISALHKNPPASGYGRGGFGGDRGGGYSRRPMAQPHALVLAPTR 242
Query: 338 ELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYA 397
ELA QI +E KF++Y ++ + GG I +Q I +G E+++ATPGRL+D +ER
Sbjct: 243 ELASQIYKEACKFSYYGPLRAAVVYGGADIYQQLREIERGVEILVATPGRLVDLMERARV 302
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L Y++LDEADRM+DMGFEPQ+ ++ E ED E R T +FSA
Sbjct: 303 SLANIRYLILDEADRMLDMGFEPQIRRIV----------EQEDMPRTEDR---QTLLFSA 349
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
T P ++RLA +L + + + +G G T+ ISQ ++ +++ +K + + LL E+ T
Sbjct: 350 TFPVEIQRLASDFLNDWIFLRVGRVGSTTDFISQKLMYVEDRDKTNAVLELLAEVRGLT- 408
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
++FV TK+ AD + L + G+ V ++HG ++Q +RE +L FR+ R +LVATDVA RG
Sbjct: 409 LIFVQTKRGADQLENFLYREGFPVASIHGDRTQREREAALTSFRSGRTPILVATDVAARG 468
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+DIP+V HVINYD+P NI+ Y HRIGRTGRAG TG+ T F++ D ++ DL +L ++
Sbjct: 469 LDIPNVLHVINYDLPTNIDDYVHRIGRTGRAGNTGLTTAFVSERDANILPDLLDILREAE 528
Query: 638 SPVP 641
VP
Sbjct: 529 QEVP 532
>gi|357615888|gb|EHJ69887.1| DEAD box RNA helicase [Danaus plexippus]
Length = 992
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 341/670 (50%), Gaps = 114/670 (17%)
Query: 57 RNSSDSR------DRERERHRREREEEA--------------KARERARLEKLAERERER 96
RN + S+ DRE+ER R + +E+A K E++RLE ++ RER
Sbjct: 74 RNGASSKSRKKSPDREKERDRSKSKEKAVKSESADYAPGTVDKEEEQSRLEAEMQKRRER 133
Query: 97 -----------ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD-------- 137
ELE K K+ +K I + + + W + ED S D
Sbjct: 134 IERWRAERKRKELESAK------KEVQKGSIVTNIQVPAAKKW-SLEDDSGDVVEEKIDE 186
Query: 138 ------MNALYQNPHEA-----QLLFGRGFRAG---------MDRREQKKLA-AKNEKEM 176
++A Q + QL RG + +KK+ KN+ E+
Sbjct: 187 EDEIDPLDAYMQEVQQEVRKVNQLDQARGISVPTTGGTGVVILTGTAKKKVTEQKNKGEL 246
Query: 177 REEIRKKEGVEEKPEEAAALKLKEEAADL---------------YDTFDMRVDRHWSEKK 221
E+ ++G+E EE +K+ AA+L D R + +
Sbjct: 247 IEQ--NQDGLEYSSEEETE-DIKDAAANLASKQRKELAKVDHASLDYMSFRKAFYTEVSE 303
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MT + +R + I KG P+P++NWA ++ + L ++++G++ P+PIQ
Sbjct: 304 LARMTPEEVEAYRTELEGIRVKGKGCPKPIKNWAHCGISKKELDILKKLGFEKPTPIQAQ 363
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM ++ P + + +GP +++M PTREL
Sbjct: 364 AIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPQL---EDTDGPISLIMTPTRELC 420
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KFA LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 421 MQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAELKRGAEMIVCTPGRMIDMLAANSGRVT 480
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 481 NLRRVTYIVLDEADRMFDMGFEPQVMKIID-----NVRPD------------RQTVMFSA 523
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LAR+ L+ P+ V +G + + QHV +++E KF +L LL +LG
Sbjct: 524 TFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQHVAILEEEAKFFKLLELLGLYSQLG- 582
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVFV+ ++NAD + K+L K Y +LHGG Q R+ ++ F+ + +LVAT VA
Sbjct: 583 -SIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVDFKNGKVKLLVATSVA 641
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ + V+NYD P + E Y HR GRTGRAG G A TFLT D+ + L
Sbjct: 642 ARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLTPEQGRYAGDVLRALE 701
Query: 635 QSNSPVPPEL 644
+ + P EL
Sbjct: 702 AAGASPPAEL 711
>gi|297817166|ref|XP_002876466.1| hypothetical protein ARALYDRAFT_486301 [Arabidopsis lyrata subsp.
lyrata]
gi|297322304|gb|EFH52725.1| hypothetical protein ARALYDRAFT_486301 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 260/422 (61%), Gaps = 20/422 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +A+ L L + R Y P+P+Q AIP+ L QRD++
Sbjct: 133 EDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLGQRDLMAC 192
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + P AV+++PTRELA QI +E KF++
Sbjct: 193 AQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELACQIHDEAKKFSY 252
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL D LER + + ++ LDEADR
Sbjct: 253 QTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQRIKFLALDEADR 312
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++RLA ++
Sbjct: 313 MLDMGFEPQIRKIVEQM---DMPPRGE----------RQTMLFSATFPREIQRLAADFMS 359
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKTAI--VFVNTKKNA 527
N + + +G G +T+LI+Q + ++ES+K S L LL E DK ++ VFV TK+ A
Sbjct: 360 NYIFLAVGRVGSSTDLITQRIEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGA 419
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + L + T++HG ++Q++RE++L F++ R +LVATDVA RG+DIP VAHV+
Sbjct: 420 DTLENWLCMNEFPATSIHGDRTQQEREVALRSFKSGRTPILVATDVAARGLDIPHVAHVV 479
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
N+D+P +I+ Y HRIGRTGRAGK+G+AT F ++ + L +++ ++N VP L ++
Sbjct: 480 NFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQMARLLAELMQEANQEVPEWLTRY 539
Query: 648 EA 649
+
Sbjct: 540 AS 541
>gi|452821200|gb|EME28233.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 1145
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 246/419 (58%), Gaps = 25/419 (5%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+ + + + ++ +M+ D +R+ I +G P+P++ W + L+ +L
Sbjct: 387 YNYIHFKKNFYIEAPEIAKMSWEDVHEYRKQLGGIRIRGRNCPKPVKTWGQCGLSSSVLD 446
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+ ++ ++ P+ IQ +IP + RDVIGIA+TGSGKT A+VLPML +I+ PP+
Sbjct: 447 TLRKLRFEKPTAIQAQSIPAIMNGRDVIGIAKTGSGKTLAYVLPMLRHIAAQPPL---QI 503
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+GP +++APTRELA QI E +FA L IKVV GG I +Q +++ G EVV+ T
Sbjct: 504 GDGPIGLIVAPTRELAIQIYGEIKRFAKALDIKVVCAYGGSGIGDQIAKLKVGAEVVVCT 563
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + Y+V+DEADRM DMGFEPQV + + N++P+
Sbjct: 564 PGRMIDLLSMNGGRATNLRRVTYLVIDEADRMFDMGFEPQVTRI-----AENVRPD---- 614
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T MFSAT PP VE LARK L P+ + +G A I Q V + KE K
Sbjct: 615 --------RQTVMFSATFPPQVENLARKILSQPIEIVVGGRSVAASSIEQFVEVRKEETK 666
Query: 502 FSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
F RL L+ + DK +I VFV+ ++NAD + +L GYR +LHGG Q R+ ++ F
Sbjct: 667 FLRLLELIGDWYDKGSILVFVDRQENADRIFNDLILAGYRCMSLHGGLDQADRDSTIADF 726
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
+ +LVAT VA RG+D+ + VINYD+P + E Y HR+GRTGRAG G A TF+T
Sbjct: 727 KNGLVKILVATSVAARGLDVKHLRLVINYDVPNHYEDYVHRVGRTGRAGNPGTAYTFIT 785
>gi|15231074|ref|NP_191416.1| DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana]
gi|75335836|sp|Q9M2F9.1|RH52_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 52
gi|6735374|emb|CAB68195.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|15146288|gb|AAK83627.1| AT3g58570/F14P22_160 [Arabidopsis thaliana]
gi|21593710|gb|AAM65677.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|27363456|gb|AAO11647.1| At3g58570/F14P22_160 [Arabidopsis thaliana]
gi|332646279|gb|AEE79800.1| DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana]
Length = 646
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 255/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L ++R Y P+P+Q AIP+ RD++
Sbjct: 130 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMAC 189
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + I G P AV+++PTRELA QI +E KF++
Sbjct: 190 AQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 249
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG + +Q + +G ++++ATPGRL D LER L ++ LDEADR
Sbjct: 250 QTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADR 309
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 310 MLDMGFEPQIRKIVQQM---DMPPPG----------VRQTMLFSATFPREIQRLASDFLS 356
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKT----AIVFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL E G++ +VFV TKK
Sbjct: 357 NYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKK 416
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ TT+HG +SQ++RE++L F+T R +LVATDVA RG+DIP VAH
Sbjct: 417 GADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAH 476
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAG +G+AT F ++T + L +++ ++N VP L
Sbjct: 477 VVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLT 536
Query: 646 KHEA 649
++ +
Sbjct: 537 RYAS 540
>gi|226506900|ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
gi|194704910|gb|ACF86539.1| unknown [Zea mays]
gi|194707190|gb|ACF87679.1| unknown [Zea mays]
gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 494
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 257/423 (60%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ G +P+P+R + + +L+ + + G+ P+PIQ P+
Sbjct: 65 MTEEEVEAYRRRREITVDGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P +S +GP +V+APTRELA QI+
Sbjct: 125 ALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSP---GDGPIVLVLAPTRELAVQIQ 181
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID +E + L + Y
Sbjct: 182 QEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTY 241
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 242 LVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPKEVE 284
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR +L +P VTIG+ KA I QHV ++ ES+K+++L LL+++ D + I +F++
Sbjct: 285 QLARNFLFDPYKVTIGSEDLKANHAIVQHVEILSESQKYNKLVNLLEDIMDGSRILIFMD 344
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 345 TKKGCDQTTRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 404
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V
Sbjct: 405 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELINILEEAGQKVSS 464
Query: 643 ELA 645
ELA
Sbjct: 465 ELA 467
>gi|410079975|ref|XP_003957568.1| hypothetical protein KAFR_0E02810 [Kazachstania africana CBS 2517]
gi|372464154|emb|CCF58433.1| hypothetical protein KAFR_0E02810 [Kazachstania africana CBS 2517]
Length = 568
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 259/436 (59%), Gaps = 29/436 (6%)
Query: 192 EAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMR 251
+A+ L KE D+ +T + + W EK + M +RDW+IF EDFNI+ K P+R
Sbjct: 106 KASELLQKENKNDVVET--AYIGKPWREKTYDAMNDRDWKIFLEDFNITMKTKVTTHPLR 163
Query: 252 NWAEGKLTPELLRAVERVG--YKNPSPIQMAAIPLGLQ-QRDVIGIAETGSGKTAAFVLP 308
NW E L P+ + V G ++ P+PIQ AIP ++ RD +G+A TGSGKT AF++P
Sbjct: 164 NWHELNLIPKDILGVLVGGLKFQEPTPIQRVAIPNTIKTNRDFLGVASTGSGKTLAFIIP 223
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE---EETVKFAHYLGIKVVSIVGGQ 365
+L + + P +GP ++++ PTRELAQQIE +E K V+SIVGG
Sbjct: 224 ILIRLPQRP--KSLKILDGPKSLIIVPTRELAQQIETSAKEITKRWKSNECNVLSIVGGH 281
Query: 366 SIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
SIE+ + GC++++ATPG+LI+CL+ LNQ + +V+DEAD+MID+GFE Q+ +
Sbjct: 282 SIEKITLDLSIGCDILVATPGKLIECLQSHILTLNQVDTLVMDEADKMIDLGFEDQITAI 341
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
L L +R T MF+AT+ ++E+++ YL +P++V IG+
Sbjct: 342 L--------------ARLSMERSSLQTMMFTATLSQSIEKISNNYLNSPIIVKIGSEEDQ 387
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNL-DKLGYRVT 542
I Q V + E +R ++++ L + + I+F+N K AD + K ++ ++ T
Sbjct: 388 VPKIQQTVEYSENEE--NRFKQIIKTLKNCSPPIIIFINYKSTADYLTKKFRNETNFKFT 445
Query: 543 TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRI 602
LHG K+QEQRE S+ RT VL+AT+VA RGIDIP+V+ VIN+ MP + E Y HRI
Sbjct: 446 ILHGSKNQEQREHSINLLRTGAVQVLIATNVAARGIDIPNVSLVINFQMPKHFEDYIHRI 505
Query: 603 GRTGRAGKTGVATTFL 618
GRTGRAG G + T++
Sbjct: 506 GRTGRAGNLGASVTYM 521
>gi|357125045|ref|XP_003564206.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like
[Brachypodium distachyon]
Length = 637
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/422 (40%), Positives = 254/422 (60%), Gaps = 22/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 160 EDIPVETSGHDVPTPVNTFAEIDLGDALNENIRRCKYVRPTPVQRHAIPIVIGGRDLMAC 219
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I SR P + P A++++PTREL+ QI EE KFA+
Sbjct: 220 AQTGSGKTAAFCFPIISGIMKSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEAKKFAY 279
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ V GG I +Q + +G E+++ATPGRL+D LER L NY+ LDEADR
Sbjct: 280 QTGVRAVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERARVSLQMVNYLALDEADR 339
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA +L
Sbjct: 340 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTMLFSATFPKEIQRLASDFLA 386
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA-------IVFVNTKK 525
+ + + +G G +T+LI+Q V + E++K S L L+ T +VFV TK+
Sbjct: 387 DYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDLIHAQKANTVPGKQSLTLVFVETKR 446
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIPDVAH
Sbjct: 447 GADALENWLYTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPDVAH 506
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
VIN+D+P +I+ Y HRIGRTGRAGK+GVAT F + + L +++ ++N VP L
Sbjct: 507 VINFDLPNDIDDYVHRIGRTGRAGKSGVATAFFNEGNMSLARPLCELMQEANQEVPQWLE 566
Query: 646 KH 647
++
Sbjct: 567 RY 568
>gi|270011364|gb|EFA07812.1| hypothetical protein TcasGA2_TC005373 [Tribolium castaneum]
Length = 1007
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 257/428 (60%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ +MT + ++E+ I KG P+P++ WA+ ++ + L ++++G++ P+PIQ+
Sbjct: 318 IAKMTHEEVEAYKEELEGIRVKGKGCPKPIKTWAQCGVSTKELNILKKLGFEKPTPIQVQ 377
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ E +GP A++M PTREL
Sbjct: 378 AIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEE---LDGPIAIIMTPTRELC 434
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KF L + V + GG I EQ +++G E+++ TPGR+ID L +
Sbjct: 435 MQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGKVT 494
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 495 NLRRVTYIVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 537
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LAR+ L+ P+ V +G + + QHVV+++E +KF +L LL + +
Sbjct: 538 TFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQHVVILEEDQKFLKLLELLGLYHEHGS 597
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFV+ ++NAD++ K L K Y +LHGG Q R+ ++ F++ + +L+AT VA R
Sbjct: 598 IIVFVDKQENADILLKELMKAAYNCLSLHGGIDQFDRDSTIIDFKSGKVKLLIATSVAAR 657
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NYD P + E Y HR GRTGRAG G A TF+T + D+ + +
Sbjct: 658 GLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQSRYAGDIIRAFELA 717
Query: 637 NSPVPPEL 644
+ P+P L
Sbjct: 718 SVPIPDPL 725
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/499 (37%), Positives = 285/499 (57%), Gaps = 28/499 (5%)
Query: 151 LFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEG--VEEKPEEAAALKLKEEAADLYDT 208
L AG D E+ AAK E + + EK + L + D Y+
Sbjct: 135 LAADALHAGYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKXEPIPSLDHSSID-YEP 193
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
F+ D + + + M+E + +R+ I G +PRP++ + + +P+L+ A+++
Sbjct: 194 FNK--DFYEEKASISGMSEEEVSEYRKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKK 251
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
GY+ P+ IQ A+P+ L D+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP
Sbjct: 252 QGYEKPTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE---EGP 308
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
V+ APTRELA QI E KF+ G++V ++ GG S +Q ++ GCE+V+ATPGRL
Sbjct: 309 IGVICAPTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRL 368
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI 448
ID ++ + +++ Y+VLDEADRM D+GFEPQ+ ++ ++P+
Sbjct: 369 IDMIKLKALTMSKATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD----------- 412
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQ 506
R T +FSATMP VE+LAR+ L +PV VT+G G A E I+Q V V+ + EK L+
Sbjct: 413 -RQTLLFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLE 471
Query: 507 RLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
+L + + D +VF + K D V L + ++V LHG K Q R +L+ F++ Y+
Sbjct: 472 KLPEMIDDGDVLVFASKKATVDEVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYH 531
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDV 625
VL+ATDVA RG+DI + V+N+D+ +++M+ HRIGRTGRAG K G A T +T +
Sbjct: 532 VLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARF 591
Query: 626 FYDLKQMLIQSNSPVPPEL 644
+L LI + V EL
Sbjct: 592 AGELVNSLIAAGQNVSVEL 610
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/428 (40%), Positives = 259/428 (60%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ D +R + I KG P+P++ W + ++ ++L A+++ GY+ P+PIQ
Sbjct: 332 LAKMSQEDVNAYRLELEGIIVKGKGCPKPIKTWVQCGVSMKILSALKKHGYEKPTPIQAQ 391
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E+EGP +V+M PTRELA
Sbjct: 392 AIPAVMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPL---EESEGPISVIMTPTRELA 448
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 449 LQITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVT 508
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ ++D+ ++P+ R T MFSA
Sbjct: 509 NLRRVTYMVLDEADRMFDMGFEPQVMRIVDS-----VRPD------------RQTVMFSA 551
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + QHV++++E +KF +L LL ++ +
Sbjct: 552 TFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQHVLVIEEDKKFLKLLELLGHYQERGS 611
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L K Y +LHGG Q R+ + F+ ++VAT VA R
Sbjct: 612 VIIFVDKQEHADALLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLMVATSVAAR 671
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY+ P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 672 GLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQVRYAGDIIKALELS 731
Query: 637 NSPVPPEL 644
S VPPEL
Sbjct: 732 GSSVPPEL 739
>gi|15227951|ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana]
gi|108861890|sp|Q84W89.2|RH37_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 37
gi|4559339|gb|AAD23001.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|330255039|gb|AEC10133.1| DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana]
Length = 633
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 262/431 (60%), Gaps = 23/431 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L + R Y P+P+Q AIP+ L+ RD++
Sbjct: 143 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMAC 202
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + P AV+++PTRELA QI +E KF++
Sbjct: 203 AQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSY 262
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL D LER + ++ LDEADR
Sbjct: 263 QTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADR 322
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA +L
Sbjct: 323 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTLLFSATFPREIQRLAADFLA 369
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL + + K A+ VFV TK+
Sbjct: 370 NYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKR 429
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE++L+ F++ R +LVATDVA RG+DIP VAH
Sbjct: 430 GADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAH 489
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 490 VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLT 549
Query: 646 KHEA-SKFKPG 655
++ + S F G
Sbjct: 550 RYASRSSFGGG 560
>gi|115437436|ref|NP_001043295.1| Os01g0549400 [Oryza sativa Japonica Group]
gi|143455968|sp|Q5JKF2.2|RH40_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 40
gi|57899403|dbj|BAD88050.1| putative ATP-dependent RNA helicase DB10 [Oryza sativa Japonica
Group]
gi|113532826|dbj|BAF05209.1| Os01g0549400 [Oryza sativa Japonica Group]
gi|125570769|gb|EAZ12284.1| hypothetical protein OsJ_02174 [Oryza sativa Japonica Group]
Length = 792
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 247/417 (59%), Gaps = 27/417 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++ G PE+L+ ++R G+ +P+PIQ + P+ LQ +DV+
Sbjct: 132 YRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVV 191
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP +I RL + N GP +V+APTRELA QI EE VKF
Sbjct: 192 AIAKTGSGKTLGYLLPGFMHIKRL----QNNPRSGPTVLVLAPTRELATQILEEAVKFGR 247
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G +VV+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 248 SSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADR 307
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P R T M++AT P V R+A L
Sbjct: 308 MLDMGFEPQIRKIVKEIPPR-----------------RQTLMYTATWPKEVRRIAEDLLV 350
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
+PV VTIG+ + A I+Q+V ++ SEK RL+++L + G K ++F TK+ D
Sbjct: 351 HPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKV-LIFCTTKRMCD 409
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+ L + + + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VIN
Sbjct: 410 QLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVIN 468
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
YD P IE Y HRIGRTGRAG TGVA TF D+ DL ++L +N VP +LA
Sbjct: 469 YDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLA 525
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 263/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + + M+E + +R+ I G +PRP++ + + +P+L+ A+++ GY+
Sbjct: 194 DFYEEKASISGMSEEEVSEYRKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKKQGYEK 253
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+ IQ A+P+ L D+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP V+
Sbjct: 254 PTSIQCQAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE---EGPIGVIC 310
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E KF+ G++V ++ GG S +Q ++ GCE+V+ATPGRLID ++
Sbjct: 311 APTRELAHQIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIK 370
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ +++ Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T
Sbjct: 371 LKALTMSKATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTL 413
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDE 511
+FSATMP VE+LAR+ L +PV VT+G G A E I+Q V V+ + EK L++L +
Sbjct: 414 LFSATMPRKVEKLAREILTDPVRVTVGEVGMANEDITQVVHVLPSDLEKLPWLLEKLPEM 473
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ D +VF + K D V L + ++V LHG K Q R +L+ F++ Y+VL+AT
Sbjct: 474 IDDGDVLVFASKKATVDEVESQLLQKSFKVAALHGDKDQASRMETLQKFKSGVYHVLIAT 533
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ +++M+ HRIGRTGRAG K G A T +T + +L
Sbjct: 534 DVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGRAHTLITQKEARFAGELV 593
Query: 631 QMLIQSNSPVPPEL 644
LI + V EL
Sbjct: 594 NSLIAAGQNVSVEL 607
>gi|254571525|ref|XP_002492872.1| RNA helicase in the DEAD-box family, necessary for prespliceosome
formation [Komagataella pastoris GS115]
gi|238032670|emb|CAY70693.1| RNA helicase in the DEAD-box family, necessary for prespliceosome
formation [Komagataella pastoris GS115]
gi|328353117|emb|CCA39515.1| ATP-dependent RNA helicase DDX46/PRP5 [Komagataella pastoris CBS
7435]
Length = 784
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/427 (40%), Positives = 243/427 (56%), Gaps = 27/427 (6%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ + E D + R NI +G I RP+ W + L + + +E + Y+ P+PIQ A
Sbjct: 186 ISSLPETDVQAIRAIHNIKIRGKHIQRPITEWCQLALPQQFMSVIEDLKYEAPTPIQSEA 245
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P + +D+IGIA+TGSGKT AF+LPM I P + EGP V++ PTRELA
Sbjct: 246 LPNLMSGKDLIGIAKTGSGKTLAFLLPMFRQIISQP---DPESGEGPIGVILTPTRELAL 302
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAV 398
QI +E F L +K + + GG SI +Q I++ + TPGRLID L R
Sbjct: 303 QIFKECKPFMKSLNLKGICVYGGASISQQISDIKKRVHFAVCTPGRLIDLLTANSGRVTN 362
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
L++ +Y+VLDEADRM DMGFEPQV+ ++ N +P+ R T +FSAT
Sbjct: 363 LSRTSYLVLDEADRMFDMGFEPQVMKII-----PNTRPD------------RQTLVFSAT 405
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK--- 515
PP +E LA+K L NP+ V +G + I+Q V ++ E+FS+L LL K
Sbjct: 406 FPPKMEALAKKVLNNPLEVIVGEKSVVADTITQKVFVIDPQERFSKLLELLGTFKSKDPT 465
Query: 516 -TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+VFV + +AD++ NL K GY +LHGGK Q R+ ++ F+T ++LVAT VA
Sbjct: 466 GKVLVFVERQDSADVLLTNLLKRGYNAQSLHGGKEQMDRDFIIQDFKTGNSDILVATSVA 525
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ + VINYD P ++E Y HR+GRTGRAG TG A TFLT D YD+ + L
Sbjct: 526 ARGLDVKRLNLVINYDSPNHMEDYVHRVGRTGRAGSTGEAVTFLTAKDYRAAYDVSRALK 585
Query: 635 QSNSPVP 641
S VP
Sbjct: 586 VSKQLVP 592
>gi|143456452|sp|Q0DB53.2|RH52A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 52A
gi|51090883|dbj|BAD35456.1| putative DEAD-box protein 3 [Oryza sativa Japonica Group]
gi|222635845|gb|EEE65977.1| hypothetical protein OsJ_21891 [Oryza sativa Japonica Group]
Length = 602
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/443 (39%), Positives = 257/443 (58%), Gaps = 30/443 (6%)
Query: 231 RIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRD 290
R+ + D + G +P P + L +LR V R GY++P+P+Q ++P+ L RD
Sbjct: 64 RLDKYDIPVEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRD 123
Query: 291 VIGIAETGSGKTAAFVLPMLTY--------ISRLPPISEENEAEGPYAVVMAPTRELAQQ 342
++ A+TGSGKTAAF LP+++ I S A P A+V+APTRELA Q
Sbjct: 124 LMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQ 183
Query: 343 IEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQC 402
I EE KF+ G++VV GG + Q + +G ++++ATPGRL+D +ER L
Sbjct: 184 INEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKVSLEAI 243
Query: 403 NYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
Y+V+DEADRM+DMGFEPQ+ +++ M N+ ++ R T +FSAT PP
Sbjct: 244 KYLVMDEADRMLDMGFEPQIRKIVERM---NMP----------RKSVRQTMLFSATFPPE 290
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---------DELG 513
++RLA +L N + +T+G G +T+LI Q V ++ + EK L LL +L
Sbjct: 291 IQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQ 350
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
+VFV TK+ AD + L G+ T +HG ++Q++RE +L F+T ++VATDV
Sbjct: 351 QPLTLVFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDV 410
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+P+VAHVINYD+P +IE Y HRIGRTGRAGK G AT F T D + L +++
Sbjct: 411 ASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELM 470
Query: 634 IQSNSPVPPELAKHEASKFKPGT 656
++ VP L ++ + G+
Sbjct: 471 TEAKQDVPDWLVQYAERPYYGGS 493
>gi|198463474|ref|XP_002135506.1| GA28589 [Drosophila pseudoobscura pseudoobscura]
gi|198151271|gb|EDY74133.1| GA28589 [Drosophila pseudoobscura pseudoobscura]
Length = 799
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 249/422 (59%), Gaps = 24/422 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
F + I+ KG ++P P ++ EG ++ + + G+ P+ IQ P+ L RD++
Sbjct: 124 FLTNNEITIKGDQVPTPSIDFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLV 183
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
G+A+TGSGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++ ++F
Sbjct: 184 GVAQTGSGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQVAIEFGS 240
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ I GG +Q + +G E+VIATPGRLID LER L +C Y+VLDEADR
Sbjct: 241 NTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTTLKRCTYLVLDEADR 300
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ ++P+ R M+SAT P V +LA ++L
Sbjct: 301 MLDMGFEPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQLAEEFLT 343
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNAD 528
N + V IG+ A I Q V + ESEK +L +LL ++ + I+FV TKK D
Sbjct: 344 NYIQVNIGSLTLSANHNILQIVDVCDESEKLGKLIKLLSDISAENETKTIIFVETKKRVD 403
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+ DV VIN
Sbjct: 404 EITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVIN 463
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
YD P N E Y HRIGRTGR+ TG A T T + + DL Q+L ++N + P+L
Sbjct: 464 YDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQEINPKLLSMS 523
Query: 649 AS 650
S
Sbjct: 524 MS 525
>gi|115491279|ref|XP_001210267.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
gi|121743211|sp|Q0D1K3.1|PRP5_ASPTN RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|114197127|gb|EAU38827.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
Length = 1181
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 252/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M+E + R + + I +G +P+P++ W++ L + L ++R+GY+NP+ IQ
Sbjct: 519 LAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDRLGYENPTSIQSQ 578
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 579 AIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPL--EN-MEGPIGLIMTPTRELA 635
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 636 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVT 695
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ +N++P+ R T +FSA
Sbjct: 696 NLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANVRPD------------RQTVLFSA 738
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L PV + +G I+Q V + E +KF RL LL DE
Sbjct: 739 TFPRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLELLGNLYSSDE 798
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 799 NEDARALIFVERQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 858
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 859 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERFSVDIAK 918
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 919 ALKQSGQKVP 928
>gi|225435708|ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
gi|147854540|emb|CAN78578.1| hypothetical protein VITISV_013679 [Vitis vinifera]
Length = 612
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 260/427 (60%), Gaps = 27/427 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + ++R Y P+P+Q AIP+ L RD++
Sbjct: 137 EDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTPVQRHAIPISLAGRDLMAC 196
Query: 295 AETGSGKTAAFVLPMLTYI-----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF P+++ I S+ PP P A++++PTREL+ QI +E K
Sbjct: 197 AQTGSGKTAAFCFPIISGIMKGQASQRPPRGARTVY--PLALILSPTRELSCQIHDEAKK 254
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ G+KVV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDE
Sbjct: 255 FSYQTGVKVVVAYGGAPISQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 314
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM+DMGFEPQ+ +++ M ++ P+ R T +FSAT P +++LA
Sbjct: 315 ADRMLDMGFEPQIRKIVEQM---DMPPQG----------VRQTMLFSATFPKEIQKLASD 361
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDK--TAIVFVN 522
+L N V + +G G +T+LI Q V + +++K S L LL + + K +VFV
Sbjct: 362 FLSNYVFLAVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVHGKQYLTLVFVE 421
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L G+ TT+HG ++Q++RE +L F++ +LVATDVA RG+DIP
Sbjct: 422 TKKGADSLEHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVATDVAARGLDIPH 481
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
VAHV+N+D+P +I+ Y HRIGRTGRAGKTG+AT F +++ + L +++ ++N VP
Sbjct: 482 VAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSELMQEANQEVPA 541
Query: 643 ELAKHEA 649
L+++ A
Sbjct: 542 WLSRYAA 548
>gi|189240548|ref|XP_973126.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 984
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 257/428 (60%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ +MT + ++E+ I KG P+P++ WA+ ++ + L ++++G++ P+PIQ+
Sbjct: 295 IAKMTHEEVEAYKEELEGIRVKGKGCPKPIKTWAQCGVSTKELNILKKLGFEKPTPIQVQ 354
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ E +GP A++M PTREL
Sbjct: 355 AIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEE---LDGPIAIIMTPTRELC 411
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ KF L + V + GG I EQ +++G E+++ TPGR+ID L +
Sbjct: 412 MQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGKVT 471
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 472 NLRRVTYIVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 514
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LAR+ L+ P+ V +G + + QHVV+++E +KF +L LL + +
Sbjct: 515 TFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQHVVILEEDQKFLKLLELLGLYHEHGS 574
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFV+ ++NAD++ K L K Y +LHGG Q R+ ++ F++ + +L+AT VA R
Sbjct: 575 IIVFVDKQENADILLKELMKAAYNCLSLHGGIDQFDRDSTIIDFKSGKVKLLIATSVAAR 634
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NYD P + E Y HR GRTGRAG G A TF+T + D+ + +
Sbjct: 635 GLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQSRYAGDIIRAFELA 694
Query: 637 NSPVPPEL 644
+ P+P L
Sbjct: 695 SVPIPDPL 702
>gi|297824215|ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp.
lyrata]
gi|297325829|gb|EFH56249.1| hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp.
lyrata]
Length = 627
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 262/431 (60%), Gaps = 23/431 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L + R Y P+P+Q AIP+ L+ RD++
Sbjct: 141 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMAC 200
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + P AV+++PTRELA QI +E KF++
Sbjct: 201 AQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSY 260
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL D LER + ++ LDEADR
Sbjct: 261 QTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADR 320
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA +L
Sbjct: 321 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTLLFSATFPREIQRLAADFLA 367
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL + + K A+ VFV TK+
Sbjct: 368 NYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKR 427
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE++L+ F++ R +LVATDVA RG+DIP VAH
Sbjct: 428 GADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAH 487
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 488 VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPAWLT 547
Query: 646 KHEA-SKFKPG 655
++ + S F G
Sbjct: 548 RYASRSSFGGG 558
>gi|303274675|ref|XP_003056653.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461005|gb|EEH58298.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1177
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 259/461 (56%), Gaps = 27/461 (5%)
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIP 247
K +A L L + A+ Y F R + + ++ ++T+ + R + I +G +P
Sbjct: 422 KLSKADKLGLADHASIDYAPF--RKNFYIESYEIAKLTKEQTKELRAELEGIKCRGKDVP 479
Query: 248 RPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVL 307
+P++ WA+ L+ ++ + R G++ P PIQ +P+ + RD I +A+TGSGKT ++L
Sbjct: 480 KPIKTWAQAGLSNRVMELIRRSGFEKPMPIQCQCLPVIMSGRDCIAVAKTGSGKTLGYIL 539
Query: 308 PMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSI 367
PML +I I++ +GP ++M PTREL QI ++ KF G+ VS+ GG +
Sbjct: 540 PMLRHIKDQREIAQ---GDGPVGMIMGPTRELVTQIGKDCRKFGRCAGMVAVSVYGGSGV 596
Query: 368 EEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
Q +++GCE+V TPGR+ID L R L + Y VLDEADRM DMGFEPQ+
Sbjct: 597 AAQIGELKRGCEIVACTPGRMIDILTTGAGRITNLRRVTYFVLDEADRMFDMGFEPQITR 656
Query: 425 VLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK 484
+++ NL+P+ R T MFSAT P A+E LAR L NP+ + +G
Sbjct: 657 IMN-----NLRPD------------RQTVMFSATFPHAMEALARAALTNPIEIQVGGRSV 699
Query: 485 ATELISQHVVMMKESEKFSRLQRLLDELGDKT-AIVFVNTKKNADMVAKNLDKLGYRVTT 543
I Q V M E ++F R LL E ++ I+FV ++ D + ++L + GY +
Sbjct: 700 VNSDIEQLVEMRPEEDRFLRALELLGEWYERGKIIIFVASQDKCDRIFRDLLRSGYPCLS 759
Query: 544 LHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIG 603
LHGGK Q RE ++ F++ N+LVAT VA RG+D+ D+ VINYD P ++E Y HR+G
Sbjct: 760 LHGGKEQTDRECTIADFKSDVCNILVATSVAARGLDVKDLRLVINYDTPNHLEDYVHRVG 819
Query: 604 RTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
RTGRAG G A TF++ + DL + + + PVP +L
Sbjct: 820 RTGRAGNKGTAVTFISEEEEKFAPDLVKAMTDAKQPVPADL 860
>gi|356513635|ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine
max]
Length = 599
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 258/423 (60%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
M+E++ +R I+ +G+ +P+P+R + E L + +G+ P+PIQ P+
Sbjct: 142 MSEQEVLHYRASREITVQGNDVPKPVRMFHEANFPDYCLEVIANLGFAEPTPIQAQGWPM 201
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT +++LP L +++ P ++ +GP +V+APTRELA QI+
Sbjct: 202 ALKGRDLIGIAETGSGKTLSYLLPALVHVNAQPRLAH---GDGPIVLVLAPTRELAVQIQ 258
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE +KF + I GG Q +++G E+VIATPGRLID LE ++ L + Y
Sbjct: 259 EEALKFGSRANKRSTCIYGGAPKGPQIRELKRGVEIVIATPGRLIDMLEAQHTNLKRVTY 318
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T ++SAT P VE
Sbjct: 319 LVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLLWSATWPREVE 361
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
LAR++LRNP V IG+ KA + I+Q V ++ + EK++RL RLL E+ D + I +F+
Sbjct: 362 TLARQFLRNPYKVIIGSPYLKANQSINQVVEVLTDMEKYNRLIRLLKEVMDGSRILIFME 421
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D V + + G+ ++HG K+Q +R+ L F++ R ++ ATDVA RG+D+ D
Sbjct: 422 TKKGCDQVTRQMRVDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKD 481
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
+ VINYD P ++E Y HRIGRTGRAG G A TF T + DL ++L + V P
Sbjct: 482 IKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFARDLIKILQDAGQVVSP 541
Query: 643 ELA 645
L+
Sbjct: 542 ALS 544
>gi|302789710|ref|XP_002976623.1| hypothetical protein SELMODRAFT_151274 [Selaginella moellendorffii]
gi|300155661|gb|EFJ22292.1| hypothetical protein SELMODRAFT_151274 [Selaginella moellendorffii]
Length = 595
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 250/420 (59%), Gaps = 25/420 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + GS IP P+ +AE L ++R + P+P+Q AIP+ L RD++
Sbjct: 132 EDIPVEASGSDIPAPVGTFAEIDFGTALDENIKRCKFVKPTPVQRHAIPIALAGRDLMAC 191
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEE-NEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
A+TGSGKT AF P++ I R PP P A++++PTREL+ QI +E KFA+
Sbjct: 192 AQTGSGKTLAFCFPIIAGILRDPPRQRPRGRWACPLALILSPTRELSAQIHDEAKKFAYR 251
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
G+KVV GG I Q + +G ++++ATPGRL D +ER L+ Y+ LDEADRM
Sbjct: 252 TGLKVVVAYGGAQISLQMRELERGVDILVATPGRLHDLMERGRVALSMIKYLALDEADRM 311
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
+DMGFEPQ+ +++ +S++ P + R T +FSAT P ++ LA +L N
Sbjct: 312 LDMGFEPQIRKIVE---TSDMPPPGQ----------RQTMLFSATFPRTIQSLAADFLHN 358
Query: 474 PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT---------AIVFVNTK 524
+ + +G G +T+LI Q V ++E+EK S L ++ G K +VFV TK
Sbjct: 359 YIFLAVGRVGSSTDLIVQRVERVQEAEKRSLLMDIIH--GQKAIGANGQPPLMLVFVETK 416
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD + L + G+ TT+HG ++Q +RE +L FRT +LVATDVA RG+DIP VA
Sbjct: 417 RGADALEDWLIRSGFPATTIHGDRTQPEREQALRCFRTGMTPILVATDVAARGLDIPHVA 476
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HVINYD+P +I+ Y HRIGRTGRAG +G+AT F T D+ + L +++ +S+ VP L
Sbjct: 477 HVINYDLPSDIDDYVHRIGRTGRAGNSGLATAFFTDKDSGLAKPLAELMQESSQEVPSWL 536
>gi|357126434|ref|XP_003564892.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like
[Brachypodium distachyon]
Length = 571
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 260/425 (61%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ M++ + +R+ +I+ +G ++P+P+R + E ++A+ + G+ P+PIQ
Sbjct: 128 VQAMSDMEVAQYRQLRDITVEGREVPKPIRYFQEANFPDYCMQAILKSGFVEPTPIQSQG 187
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RDVIGIAETGSGKT +++LP L ++ P + + +GP +++APTRELA
Sbjct: 188 WPMALKGRDVIGIAETGSGKTLSYILPGLVHVGAQPRL---EQGDGPIVLILAPTRELAV 244
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI+EE+ KF Y + I GG Q +R+G E+VIATPGRLID LE + L +
Sbjct: 245 QIQEESTKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLRR 304
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T +SAT P
Sbjct: 305 VTYLVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLYWSATWPR 347
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++L+NP V IGTA KA I Q V ++ + EK+ RL +LL +L D + I +
Sbjct: 348 EVESLARQFLQNPYKVMIGTAELKANHSIQQIVEVISDHEKYPRLSKLLSDLMDGSRILI 407
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F TKK D V + L G+ ++HG K+Q +R+ L F++ + ++ ATDVA RG+D
Sbjct: 408 FFQTKKECDKVTRQLRMDGWPALSIHGDKAQSERDYVLSEFKSGKSPIMAATDVAARGLD 467
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ VIN+D P IE Y HRIGRTGRAG TG+A TF T ++ +L ++L ++
Sbjct: 468 VKDIKCVINFDFPTTIEDYIHRIGRTGRAGATGMAFTFFTHSNSKYSRNLVKILREAGQV 527
Query: 640 VPPEL 644
V P L
Sbjct: 528 VNPAL 532
>gi|168021119|ref|XP_001763089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685572|gb|EDQ71966.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 514
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 256/425 (60%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ +TE + +R I+ +G +P+P+R + E +L V + G+ P+ IQ
Sbjct: 65 VSALTEEEVAAYRRKREITVEGRTVPKPVRTFEEASFPDYVLHEVLKAGFTEPTAIQAQG 124
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IG+AETGSGKT A++LP + +++ P ++ +GP +V+APTRELA
Sbjct: 125 WPMALKGRDLIGLAETGSGKTLAYLLPAIVHVNAQPYLAP---GDGPIVLVLAPTRELAV 181
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI++E+ KF IK I GG Q +++G EVVIATPGRLID LE R+ L +
Sbjct: 182 QIQQESTKFGASSKIKNTCIYGGAPKGPQIRDLQKGVEVVIATPGRLIDMLEGRHTNLRR 241
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P
Sbjct: 242 VTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLYWSATWPK 284
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT-AIV 519
VE LAR++L +P VTIG++ KA I Q V ++ E EK+ +L +LL+E+ D + +V
Sbjct: 285 EVEFLARQFLNDPYKVTIGSSDLKANHAIDQVVEVVSEHEKYPKLIKLLEEIMDGSRLLV 344
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F+ TK+ D V + L G+ ++HG KSQ +R+ L F+ + ++ ATDVA RG+D
Sbjct: 345 FMETKRGCDQVTRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLD 404
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ VINYD PG+ E Y HRIGRTGRAG G A TF T + +L +L+++ P
Sbjct: 405 VKDIKCVINYDFPGSCEDYVHRIGRTGRAGAKGAAYTFFTAANAKHAKELVSILVEAGQP 464
Query: 640 VPPEL 644
V +L
Sbjct: 465 VSSQL 469
>gi|307105760|gb|EFN54008.1| hypothetical protein CHLNCDRAFT_31911 [Chlorella variabilis]
Length = 556
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 253/434 (58%), Gaps = 25/434 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G+ P + ++ + L P L+ V+R Y P+P+Q +IP+GL RD++
Sbjct: 16 EDIPVEVSGADAPEGISSFEDVDLPPALMENVKRCKYNKPTPVQRYSIPIGLAGRDMMAC 75
Query: 295 AETGSGKTAAFVLPMLTYISR--LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P++ I R P+ +A P A+V++PTREL+ QI +E+ KF +
Sbjct: 76 AQTGSGKTAAFCFPIIGNILRSGYTPLRGSRKAF-PLALVLSPTRELSTQIYDESRKFTY 134
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ V + GG ++Q + +GC+ ++ATPGRLID ++R L + ++ LDEADR
Sbjct: 135 QTGVRPVVVYGGAPQQQQLRELERGCDFLVATPGRLIDIMDRARVSLGKVRFLALDEADR 194
Query: 413 MIDMGFEPQVV--GVLDAMPSSNLKPENEDEELDEKRIY--------------------R 450
M+DMGFEPQ+ G L +P + P E +R R
Sbjct: 195 MLDMGFEPQIRRRGPLPGLPRLSPSPAAAPEAWPCRRGLPRPRRNPPIVDEEDMPRPGER 254
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD 510
T +FSAT P ++RLA +L N + +T+G G +T+LI Q + + +K + LL
Sbjct: 255 QTLLFSATFPKEIQRLAADFLHNYIFLTVGRVGSSTDLIVQVIEYVPIQDKRQMVLDLLQ 314
Query: 511 ELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVA 570
L ++FV TKK AD + L + G T++HG +SQ +RE +L FRT R VLVA
Sbjct: 315 TLEKGLTLIFVETKKGADALEDFLCRNGLPATSIHGDRSQAEREAALRSFRTGRTPVLVA 374
Query: 571 TDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLK 630
TDVA RG+DIP V HVIN+D+P +I+ Y HRIGRTGRAGK G+AT F + DT + L
Sbjct: 375 TDVAARGLDIPHVTHVINFDLPSDIDDYVHRIGRTGRAGKKGLATAFFSEKDTGISSKLV 434
Query: 631 QMLIQSNSPVPPEL 644
++L ++N VP L
Sbjct: 435 EILSETNQEVPAWL 448
>gi|313233924|emb|CBY10092.1| unnamed protein product [Oikopleura dioica]
Length = 611
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 174/429 (40%), Positives = 252/429 (58%), Gaps = 27/429 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D G P + +AE +L + A++ Y P+P+Q AIP+ + RD++
Sbjct: 124 DDIPAEVTGEDPPSSVNTFAECELGDIINEAIKLANYTVPTPVQKNAIPIINKGRDLMSC 183
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG---------PYAVVMAPTRELAQQIEE 345
A+TGSGKTAAF+LPML+ I P N+ P A+V++PTRELA QI E
Sbjct: 184 AQTGSGKTAAFLLPMLSSIFHSGPGESANQNSSGYRGRRKIYPLALVLSPTRELASQIYE 243
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E+ KFA+ ++ I GG + Q + +GC +++ATPGRL D L+R L+ C Y+
Sbjct: 244 ESRKFAYRSQVRPCVIYGGADVGAQMRDLDRGCHLLVATPGRLADFLDRGKIGLDYCRYL 303
Query: 406 VLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
LDEADRM+DMGFEPQ+ ++ DAMP P+ + R T MFSAT P +
Sbjct: 304 CLDEADRMLDMGFEPQIRRIVEKDAMP-----PKGD----------RQTLMFSATFPKEI 348
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA-IVFVN 522
+ LAR +L N + +T+G G ++ I+Q VV + E++K + L LL T +VF
Sbjct: 349 QHLARDFLDNYIFLTVGRVGSTSQNITQKVVWVDENDKINFLTDLLTATDQNTCFVVFTE 408
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L G+R T +HG ++Q +RE +L+ FR VLVAT VA RG+DIP+
Sbjct: 409 TKKGADYLDNYLYDRGFRSTCIHGDRNQREREGALKSFREAVTPVLVATAVAARGLDIPN 468
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V HVIN+D+P +I+ Y HRIGRTGR G G+AT+F ++++ DL ++LI++ VP
Sbjct: 469 VRHVINFDLPSDIDEYVHRIGRTGRVGNIGLATSFFNDKNSNIVRDLLELLIEAKQEVPE 528
Query: 643 ELAKHEASK 651
L K A+
Sbjct: 529 WLEKCAANN 537
>gi|28393424|gb|AAO42134.1| putative DEAD/DEAH box RNA helicase [Arabidopsis thaliana]
Length = 633
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 262/431 (60%), Gaps = 23/431 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L + R Y P+P+Q AIP+ L+ RD++
Sbjct: 143 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMAC 202
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + P AV+++PTRELA QI +E +F++
Sbjct: 203 AQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKRFSY 262
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL D LER + ++ LDEADR
Sbjct: 263 QTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADR 322
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA +L
Sbjct: 323 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTLLFSATFPREIQRLAADFLA 369
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL + + K A+ VFV TK+
Sbjct: 370 NYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKR 429
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE++L+ F++ R +LVATDVA RG+DIP VAH
Sbjct: 430 GADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAH 489
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 490 VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLT 549
Query: 646 KHEA-SKFKPG 655
++ + S F G
Sbjct: 550 RYASRSSFGGG 560
>gi|289724644|gb|ADD18300.1| ATP-dependent RNA helicase [Glossina morsitans morsitans]
Length = 652
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 248/416 (59%), Gaps = 24/416 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
F + I+ KGS IP P + EG ++ ++++G+ P+ IQ P+ L RD++
Sbjct: 100 FLTNNEITLKGSSIPMPSFEFNEGGFPDYVMTGIKKLGFAKPTAIQAQGWPIALSGRDMV 159
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
G+A+TGSGKT A+VLP + +I+ P + ++GP A+++APTRELAQQI++ +F
Sbjct: 160 GVAQTGSGKTLAYVLPAVVHINNQPRLEH---SDGPIALILAPTRELAQQIQQVANEFGS 216
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ ++ I GG + Q + +G E+VIATPGRLID LER L +C Y+VLDEADR
Sbjct: 217 QIQVRNTCIFGGAPKQPQSRDLERGVEIVIATPGRLIDFLERGVTNLRRCTYLVLDEADR 276
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ ++P+ R M+SAT P V LA ++L
Sbjct: 277 MLDMGFEPQIRKII-----KQIRPD------------RQVLMWSATWPKEVRNLAEEFLD 319
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNAD 528
N + + IG+ A I Q V + +E+EK ++L +LL E+ D I+FV TKK D
Sbjct: 320 NYIQINIGSLTLSANHNILQIVDVCEEAEKTNKLNKLLGEISSEKDTKTIIFVETKKRVD 379
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +++ + G+R +HG KSQ++R+ L FR R ++LVATDVA RG+D+ DV VIN
Sbjct: 380 EITRSISRQGWRACAIHGDKSQQERDYVLTSFRNGRSSILVATDVAARGLDVDDVKFVIN 439
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P N E Y HRIGRTGR+ TG A T T + + DL Q+L ++ + P L
Sbjct: 440 YDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTTANANKANDLIQVLREAKQVINPRL 495
>gi|50310213|ref|XP_455126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660335|sp|Q6CLR3.1|DED1_KLULA RecName: Full=ATP-dependent RNA helicase DED1
gi|49644262|emb|CAG97833.1| KLLA0F01034p [Kluyveromyces lactis]
Length = 627
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 250/420 (59%), Gaps = 26/420 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ +P P+ + L P LL ++ + P+P+Q ++P+ RD++
Sbjct: 143 DDIPVEASGNDVPEPISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMAC 202
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ P S EA G P AV++APTRELA QI +E
Sbjct: 203 AQTGSGKTGGFLFPVLSESFSSGPASTP-EAAGNSYIKKVYPTAVILAPTRELATQIYDE 261
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + + GG SI+ Q ++R GC +++ATPGRL D LERRY L Y+V
Sbjct: 262 AKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVATPGRLTDLLERRYISLANVKYLV 321
Query: 407 LDEADRMIDMGFEPQVVGVLDA--MPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
LDEADRM+DMGFEPQ+ +++ MPS + R T MFSAT P ++
Sbjct: 322 LDEADRMLDMGFEPQIRRIVEGSDMPSVD---------------NRQTLMFSATFPSEIQ 366
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
LA +L++ V +++G G +E I+Q ++ +++ +K L LL + ++FV TK
Sbjct: 367 HLASDFLKDYVFLSVGRVGSTSENITQKILYVEDFDKNDTLLDLLAASNEGLTLIFVETK 426
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD + L G++ T +HG ++Q +RE +L F+T R +LVAT VA RG+DIP+V
Sbjct: 427 RAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVT 486
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HVIN+D+P +I+ Y HRIGRTGRAG TGVATTF + +V +L +L ++N VP L
Sbjct: 487 HVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
>gi|196015847|ref|XP_002117779.1| hypothetical protein TRIADDRAFT_51106 [Trichoplax adhaerens]
gi|190579664|gb|EDV19755.1| hypothetical protein TRIADDRAFT_51106 [Trichoplax adhaerens]
Length = 569
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/492 (36%), Positives = 276/492 (56%), Gaps = 39/492 (7%)
Query: 171 KNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERD 229
K+EK+++EE + E + E+ AA +L + ++ + W L+ ++E
Sbjct: 52 KHEKQLKEEQKILENISERKALMAAAELAKGI-----KYEKSLRTSWQPPGYLQRLSEGA 106
Query: 230 WRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQR 289
R+ ++I +G+ +P P++ + E K ++ ++++ G +P+PIQ+ IP L R
Sbjct: 107 RDRLRKKWHIIVEGADVPPPVKTFKEMKFPKSIIHSLKKQGITHPTPIQIQGIPAVLFGR 166
Query: 290 DVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
D+IGIA TGSGKT F LP++ + + LP + E GPY ++M P+RELA+Q
Sbjct: 167 DMIGIAFTGSGKTLVFTLPLIMFALEQETGLPFVRNE----GPYGLIMCPSRELARQTYN 222
Query: 346 ETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
+F L I+ + +GG S++EQ +R+G + +ATPGRL+D L+++Y L
Sbjct: 223 TIKRFCQALTADGHPEIRTMLCIGGISMKEQTDAMRRGVHIAVATPGRLMDMLDKKYLSL 282
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATM 459
+ C Y+ +DEADRMIDMGFE + V + R T +FSATM
Sbjct: 283 DICRYLAIDEADRMIDMGFEEDMRTVFSYFKAQ-----------------RQTLLFSATM 325
Query: 460 PPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIV 519
P ++ A+ L PV V +G AG A + Q V +K+ K L L + G ++
Sbjct: 326 PKKIQNFAKSALVRPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTG-PPVLI 384
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F KK+ D + + L G +HGGK QE+RE ++ F+ + +VL+ATDVA +G+D
Sbjct: 385 FAEKKKDVDDIHEYLLLKGVEAVAIHGGKDQEEREFAITSFKLSKKDVLIATDVASKGLD 444
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD-VFYDLKQMLIQSNS 638
PDV HVINYDMP +IE Y HRIGRTGR GKTG+ATTF+ ++ V DLK +LI++
Sbjct: 445 FPDVKHVINYDMPEDIENYVHRIGRTGRCGKTGLATTFINKSSSEYVLLDLKHLLIEAKQ 504
Query: 639 PVPPELAKHEAS 650
+PP L +A+
Sbjct: 505 KLPPFLLTLQAA 516
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 251/415 (60%), Gaps = 23/415 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+ + I G +PRP++N+ + L+ A+ + GY+ P+ IQ A+P+ L RD+I
Sbjct: 196 YMKSLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDII 255
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELA QI E KFA
Sbjct: 256 GIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAHQIYLEAKKFAK 312
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++V ++ GG S EQ ++ GCE+V+ATPGRLID L+ + + + Y+VLDEADR
Sbjct: 313 PYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLLKMKALRMFRATYLVLDEADR 372
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M D+GFEPQ+ ++ ++P+ R T +FSATMP VERLAR+ L
Sbjct: 373 MFDLGFEPQIRSIV-----GQIRPD------------RQTLLFSATMPYKVERLAREILT 415
Query: 473 NPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDELGDKTAIVFVNTKKNADMV 530
+P+ VT+G G A E I Q V V+ ++EK L+++ + D +VF K D V
Sbjct: 416 DPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKMPGMIDDGDVLVFATKKARVDEV 475
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
L++ G++V LHG K Q R +L+ F++ Y+VLVATDVA RG+DI + V+N+D
Sbjct: 476 ENQLNQHGFKVAALHGDKDQASRMETLQKFKSGIYHVLVATDVAARGLDIKSIKTVVNFD 535
Query: 591 MPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ ++M+ HRIGRTGRAG K G A T +T ++ +L LI + VP EL
Sbjct: 536 IAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKESRFAGELVHSLIAAGQDVPNEL 590
>gi|307173398|gb|EFN64357.1| Probable ATP-dependent RNA helicase DDX5 [Camponotus floridanus]
Length = 639
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 254/436 (58%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG +P P++ + EG P ++ + R GY P+PIQ P+ L RD++
Sbjct: 120 FRENAEITVKGENVPNPIQYFEEGNFPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLV 179
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP + +I P +S +GP +V+APTRELAQQI+E F
Sbjct: 180 AIAQTGSGKTLGYILPAIVHIIHQPRLSN---GDGPIVLVLAPTRELAQQIQEVANCFGE 236
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 237 TAAVRNTCIFGGAPKGPQAHDLERGIEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 296
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 297 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLT 339
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNAD 528
+ V + IG+ A I+Q + + E EK S+L RLL E+G + I+FV TK+ D
Sbjct: 340 DYVHLNIGSLTLSANHNITQIIDVCHEYEKDSKLYRLLQEIGTEKENKTIIFVETKRKVD 399
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ FR+ R +LVATDVA RG+D+ DV +VIN
Sbjct: 400 DITRNIRRDGWQAVSIHGDKNQQERDHVLQEFRSGRAPILVATDVAARGLDVDDVKYVIN 459
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ V P L++
Sbjct: 460 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVLREAGQNVNPRLSEM- 518
Query: 649 ASKFKPGTIPDRPPRR 664
A K G R +R
Sbjct: 519 AEMAKAGNFSGRGAKR 534
>gi|361130681|gb|EHL02431.1| putative Pre-mRNA-processing ATP-dependent RNA helicase prp5
[Glarea lozoyensis 74030]
Length = 1084
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 272/477 (57%), Gaps = 36/477 (7%)
Query: 184 EGVEEKPEEAAAL-----KLKEEAADLYDTFDM---RVDRHWSEKKLEEMTERDWRIFRE 235
+ +E P++ A+ K KE Y D+ R + + +L +MTE + R
Sbjct: 378 KAIEADPDDILAMASKSRKKKELPTINYSKIDLEPFRKNFYTEPAELADMTETELADLRL 437
Query: 236 DFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+ + I G +P+P++ W++ L + L + ++GY P+ IQM AIP + RDVIG+
Sbjct: 438 ELDGIKVAGKDVPKPVQKWSQCGLNVQSLDVIRKLGYDRPTAIQMQAIPAIMSGRDVIGV 497
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
A+TGSGKT AF+LP+ +I P+ ++GP ++M PTRELA QI +E F +
Sbjct: 498 AKTGSGKTIAFMLPIFRHIRDQKPL---EGSDGPIGLIMTPTRELATQIHKECKPFLRAM 554
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEAD 411
G++ V GG I++Q +++G E+++ TPGR+ID L R L + YVVLDEAD
Sbjct: 555 GLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEAD 614
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM DMGFEPQV+ + +N++P+ R T +FSATMP ++ LA+K L
Sbjct: 615 RMFDMGFEPQVMKIF-----ANIRPD------------RQTILFSATMPRIMDALAKKTL 657
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNA 527
+PV +T+G I+Q V + +E EKF RL LL EL DK ++FV+ ++ A
Sbjct: 658 NSPVEITVGGRSVVAPEITQIVEVREEKEKFHRLLELLGELYDKDEDARTLIFVDRQEKA 717
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + K+L + GY ++HGGK Q R+ +++ F+ +++AT VA RG+D+ + V+
Sbjct: 718 DDLLKDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGVIPIMIATSVAARGLDVKQLKLVV 777
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
N+D P ++E Y HR GRTGRAG TG A TF+T + + L QS PVP L
Sbjct: 778 NFDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEDQEQFSVGIAKALEQSGQPVPDRL 834
>gi|18407327|ref|NP_566099.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
gi|75318047|sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|16323192|gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|20196880|gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|21700913|gb|AAM70580.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|330255734|gb|AEC10828.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
Length = 760
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 260/426 (61%), Gaps = 23/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ MTE++ +R+ I G + RP++ + + + +++ A+++ Y+ P+ IQ A
Sbjct: 199 ISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQA 258
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P+ L RDVIGIA+TGSGKTAAFVLPM+ +I P + + EGP V+ APTRELA
Sbjct: 259 LPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRD---EGPIGVICAPTRELAH 315
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI E KF+ G++V ++ GG S EQ ++ GCE+V+ATPGRLID L+ + + +
Sbjct: 316 QIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMR 375
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
+Y+VLDEADRM D+GFEPQV ++ ++P+ R T +FSATMP
Sbjct: 376 ASYLVLDEADRMFDLGFEPQVRSIV-----GQIRPD------------RQTLLFSATMPW 418
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDELGDKTAIV 519
VE+LAR+ L +P+ VT+G G A E I+Q V V+ ++EK L++L + + +V
Sbjct: 419 KVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLV 478
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F + K D + L ++V LHG K Q R +L+ F++ ++VL+ATDVA RG+D
Sbjct: 479 FASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLD 538
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
I + V+NYD+ +++M+ HRIGRTGRAG + GVA T +T + +L L+ +
Sbjct: 539 IKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQ 598
Query: 639 PVPPEL 644
VPPEL
Sbjct: 599 NVPPEL 604
>gi|168034811|ref|XP_001769905.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168034871|ref|XP_001769935.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678811|gb|EDQ65265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678841|gb|EDQ65295.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 582
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 175/413 (42%), Positives = 243/413 (58%), Gaps = 30/413 (7%)
Query: 236 DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
D I+ P P+ ++ + L +++ V Y P+PIQ A+P+ L RD++G A
Sbjct: 120 DVEIATGSEPAPAPIESFEDMCLHLSIMKDVTFHNYTTPTPIQAQALPVALSGRDLLGCA 179
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL- 354
ETGSGKTAAF LPM+ + PPI +GP A+V+APTRELAQQIE+E F
Sbjct: 180 ETGSGKTAAFSLPMIQHCLAQPPI---RRGDGPLALVLAPTRELAQQIEKEVKAFCRSAE 236
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
G + +VGG +I EQ +R G E+V+ATPGR ID L++ + L++ +YVVLDEADRM+
Sbjct: 237 GFRTAIVVGGTNIYEQRSELRAGVEIVVATPGRFIDHLQQGNSSLSRVSYVVLDEADRML 296
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ V+ ++P + T +FSATMP +E LA++YL NP
Sbjct: 297 DMGFEPQIREVMRSLPKKH-----------------QTLLFSATMPEEIEALAQEYLDNP 339
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKF-SRLQRLLDELGDKT--------AIVFVNTKK 525
+ V +G T ++Q++ + E EK S L L+DE IVFV K
Sbjct: 340 IRVKVGRVSSPTANVTQNLEKITEKEKIESLLALLVDEHSQSLDTNQPPPLTIVFVERKA 399
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
D V L + G + T LHGG+SQ +RE +L FR N+LVATDVA RG+D+ VAH
Sbjct: 400 RCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTNILVATDVASRGLDVTGVAH 459
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
VIN D+P +E Y HRIGRTGRAG +G AT+F T D + +++ + ++ S
Sbjct: 460 VINLDLPKTMEDYVHRIGRTGRAGASGRATSFYTERDMFLVAQIRRAITEAES 512
>gi|255580688|ref|XP_002531166.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223529236|gb|EEF31209.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 585
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 175/460 (38%), Positives = 269/460 (58%), Gaps = 26/460 (5%)
Query: 199 KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
+E + +D D VD + E +E T ++ + ED + G +P P+ +AE L
Sbjct: 80 REREVNPFDDNDGDVDSAFVE---QENTGINFDAY-EDIPVETSGDNVPPPVNTFAEIDL 135
Query: 259 TPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP 318
L + + R Y P+P+Q AIP+ L RD++ A+TGSGKTAAF P+++ I R
Sbjct: 136 GEALNQNIRRCKYVKPTPVQRNAIPIILAGRDLMACAQTGSGKTAAFCFPIISGIMREQY 195
Query: 319 ISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQ 376
+ P A++++PTREL+ QI +E KF++ G+KVV GG I +Q + +
Sbjct: 196 VQRPRGPRTVYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELER 255
Query: 377 GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP 436
G ++++ATPGRL+D LER L Y+ LDEADRM+DMGFEPQ+ +++ M ++ P
Sbjct: 256 GVDILVATPGRLVDLLERARISLQMIRYLALDEADRMLDMGFEPQIRKIVEQM---DMPP 312
Query: 437 ENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
R T +FSAT P ++RLA +L + + + +G G +T+LI Q V +
Sbjct: 313 PGR----------RQTMLFSATFPKEIQRLASDFLASYIFLAVGRVGSSTDLIVQRVEFV 362
Query: 497 KESEKFSRLQRLLD-------ELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKS 549
E++K S L LL + +VFV TKK AD + L G+ TT+HG ++
Sbjct: 363 HETDKRSHLMDLLHAQRETEINIKHSLTLVFVETKKGADSLENWLCVNGFPATTIHGDRT 422
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
Q++RE++L F++ + +LVATDVA RG+DIP VAHV+N+D+P +I+ Y HRIGRTGRAG
Sbjct: 423 QQEREMALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG 482
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
KTG+AT F ++ + L ++ ++N VP L ++ +
Sbjct: 483 KTGLATAFFNENNLSLARPLADLMQEANQEVPAWLTRYAS 522
>gi|224052974|ref|XP_002297644.1| predicted protein [Populus trichocarpa]
gi|222844902|gb|EEE82449.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 254/427 (59%), Gaps = 25/427 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P + +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 105 EDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISLTGRDLMAC 164
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG-----PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF P+++ I ++ S + G P A++++PTREL+ QI EE K
Sbjct: 165 AQTGSGKTAAFCFPIISGIMKMQDQSAQRPLRGARTVYPLALILSPTRELSMQIHEEAKK 224
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ G+KVV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDE
Sbjct: 225 FSYQTGVKVVVAYGGAPIHQQLRELERGVDILVATPGRLVDLLERARVSLQMIKYLALDE 284
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA
Sbjct: 285 ADRMLDMGFEPQIRKIVEQM---DMPPPGS----------RQTMLFSATFPKEIQRLASD 331
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-------ELGDKTAIVFVN 522
+L + V + +G G +T+LI+Q V ++ES+K S L LL + +VFV
Sbjct: 332 FLASYVFLAVGRVGSSTDLIAQRVEFVQESDKRSHLMDLLYAQRANGVQGKQDLTLVFVE 391
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L + T++HG +SQ++RE +L F++ +LVATDVA RG+DIP
Sbjct: 392 TKKGADSLEHWLCINNFPATSIHGDRSQQEREQALRSFKSGNTPILVATDVAARGLDIPR 451
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
VAHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F + + L +++ ++N VP
Sbjct: 452 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNASMARPLSELMQEANQEVPA 511
Query: 643 ELAKHEA 649
L+++ A
Sbjct: 512 WLSRYAA 518
>gi|384485449|gb|EIE77629.1| hypothetical protein RO3G_02333 [Rhizopus delemar RA 99-880]
Length = 1089
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 255/445 (57%), Gaps = 30/445 (6%)
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
D R D + +L EMT + R + + I +G P+P+ W L L + +
Sbjct: 411 DFRKDFYIEPPELREMTPDQVDLLRIELDGIKIRGVNCPKPITKWTHCGLPVGCLEVIRK 470
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+ Y+ P+ IQ AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EGP
Sbjct: 471 LKYEKPTAIQAQAIPAIMNGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEA---GEGP 527
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
A++M PTRELA QI +E F L ++ V GG I++Q +++GCE+++ TPGR+
Sbjct: 528 MAIIMTPTRELATQIHKECKPFLKVLNLRAVCAYGGSPIKDQIADLKRGCEIIVCTPGRM 587
Query: 389 IDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
ID L R L + Y+V+DEADRM DMGFEPQV+ +++ N++P
Sbjct: 588 IDLLCANSGRVTNLRRVTYMVMDEADRMFDMGFEPQVMKIVN-----NVRPN-------- 634
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R T +FSAT P +E LARK L+ P+ +T+G + + Q V + +E+ KF RL
Sbjct: 635 ----RQTVLFSATFPRQMEALARKVLKKPLEITVGGRSVVCDDVDQIVEVREENTKFVRL 690
Query: 506 QRLLDEL------GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEG 559
+L +L + +AI+FV+ + AD + ++L + GY +LHGGK Q R+ ++
Sbjct: 691 LEILGKLFHDEGEDNASAIIFVDRHEAADNLLRDLMRRGYPCQSLHGGKDQADRDSTIYD 750
Query: 560 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
F++ N+L+AT VA RG+D+ ++ VINY+ P ++E Y HR+GRTGRAG G A TF+T
Sbjct: 751 FKSGITNILIATSVAARGLDVKNLKVVINYECPNHMEDYVHRVGRTGRAGNKGTAYTFIT 810
Query: 620 FHDTDVFYDLKQMLIQSNSPVPPEL 644
D+ + L S +PP+L
Sbjct: 811 PDQDRYAMDICKALKMSGQEIPPDL 835
>gi|357454677|ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|124360402|gb|ABN08415.1| Helicase, C-terminal [Medicago truncatula]
gi|355486667|gb|AES67870.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355502353|gb|AES83556.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 499
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 260/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ +G +P+P++++++ +L V++ G+ P+PIQ P+
Sbjct: 69 MTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPM 128
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P + + +GP +V+APTRELA QI+
Sbjct: 129 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAVQIQ 185
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E++IATPGRLID LE + L + Y
Sbjct: 186 QEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTY 245
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 246 LVLDEADRMLDMGFDPQIRKIV-----SQIRPD------------RQTLYWSATWPKEVE 288
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR++L NP V IG+ KA I Q+V ++ E +K+ +L +LL+++ D + I +F++
Sbjct: 289 QLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD 348
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 349 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 408
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V
Sbjct: 409 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSS 468
Query: 643 ELA 645
ELA
Sbjct: 469 ELA 471
>gi|449448814|ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
sativus]
Length = 625
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 251/425 (59%), Gaps = 23/425 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + + R Y P+P+Q AIP+ L RD++
Sbjct: 141 EDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMAC 200
Query: 295 AETGSGKTAAFVLPMLTYISR---LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF P+++ I + +P + P A++++PTREL+ QI EE KF+
Sbjct: 201 AQTGSGKTAAFCFPIISGIMKGQSMPRPARGARTVYPLALILSPTRELSMQIHEEARKFS 260
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ G++VV GG I Q + +G ++++ATPGRL+D LER L Y+ LDEAD
Sbjct: 261 YQTGVRVVVAYGGAPINLQLRDLERGVDILVATPGRLVDLLERAKVSLQMIRYLALDEAD 320
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 321 RMLDMGFEPQIRKIVEQM---DMPPPG----------VRQTMLFSATFPREIQRLASDFL 367
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-------ELGDKTAIVFVNTK 524
+ + +G G +T+LI+Q V + E++K S L LL + +VFV TK
Sbjct: 368 DKYIFLAVGRVGSSTDLIAQRVEFVHEADKRSHLLDLLHAQRANGVQGKQSLTLVFVETK 427
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
K AD + L G+ TT+HG ++Q++RE +L FR+ +LVATDVA RG+DIP VA
Sbjct: 428 KGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAARGLDIPHVA 487
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HV+N+D+P +I+ Y HRIGRTGRAGKTG+AT F ++ + L ++ +SN VP L
Sbjct: 488 HVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNASLARSLADLMSESNQEVPEWL 547
Query: 645 AKHEA 649
+ A
Sbjct: 548 IRFAA 552
>gi|449019241|dbj|BAM82643.1| p68 RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 645
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 173/423 (40%), Positives = 250/423 (59%), Gaps = 31/423 (7%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR+ I+ +G +P P ++ E P +++ ++R G+ P+ IQ A P+ L+ RD+I
Sbjct: 178 FRQRMEITVRGKNVPNPCESFLEAGFPPAIVQCIQRAGFTAPTAIQAQAWPVALKGRDLI 237
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIAETGSGKT A++LP L +I PP+ +GP +V+APTRELA QI+ E KF
Sbjct: 238 GIAETGSGKTCAYLLPALVHIHGQPPL---RRGDGPICLVLAPTRELAVQIQTEATKFGT 294
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I+ + GG S Q + +G E++IATPGRLID LE L + Y+VLDEADR
Sbjct: 295 ASRIRNACVYGGVSRGPQARELSRGIEILIATPGRLIDFLESGRTNLRRVTYLVLDEADR 354
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ ++P+ R T MF+AT P V+ +AR++L
Sbjct: 355 MLDMGFEPQLRKIV-----GQIRPD------------RQTLMFTATWPRQVQVIAREFLT 397
Query: 473 NPVVVTIGTAG---KATELISQHVVMMKESEKFSRLQRLLDELGDKTA--------IVFV 521
+ I G A + I Q V ++ E EK RLQ LL L + +A +VF
Sbjct: 398 AGDWIQINIGGLDLSANKSIRQVVQVLDEDEKPERLQSLLKTLLNASADTDSNAKVLVFT 457
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
+TK+ AD +++ L G LHG K+Q +R+ ++ FR+ + +LVATDVA RG+DI
Sbjct: 458 DTKRKADQLSRRLQHWGLAALALHGDKTQMERDRAIGSFRSGQARLLVATDVAARGLDIK 517
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
++++V+NYD PG IE Y HRIGRTGRAG TG A +F T + + +L Q+L +S + VP
Sbjct: 518 NISYVVNYDFPGTIEDYVHRIGRTGRAGSTGTAYSFFTPANARLASELVQILEESQNEVP 577
Query: 642 PEL 644
EL
Sbjct: 578 AEL 580
>gi|356530675|ref|XP_003533906.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
max]
Length = 611
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/430 (39%), Positives = 254/430 (59%), Gaps = 22/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ +AE L L + ++R Y P+P+Q AIP+ L RD++
Sbjct: 140 DDIPVETSGENVPPPVNTFAEIDLGEALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMAC 199
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I R A P A++++PTREL+ QI +E KF++
Sbjct: 200 AQTGSGKTAAFCFPIISGIMREQYAQRPRVARTAYPLALILSPTRELSCQIHDEAKKFSY 259
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEADR
Sbjct: 260 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 319
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R T +FSAT P ++ LA +L
Sbjct: 320 MLDMGFEPQIRKIVEQM---DMPPPG----------MRQTLLFSATFPKEIQALASDFLS 366
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELG----DKTAIVFVNTKK 525
N V + +G G +T+LI+Q V + ES+K S L LL E G +VFV TKK
Sbjct: 367 NYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHAQRETGVNGKQGLTLVFVETKK 426
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ ++HG ++Q++RE++L F+T +LVATDVA RG+DIP VAH
Sbjct: 427 GADALEHCLCVNGFPAASIHGDRTQQERELALRSFKTGNTPILVATDVAARGLDIPRVAH 486
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK G+AT F + ++ L ++ ++N VP L+
Sbjct: 487 VVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLNLAKSLADLMQEANQEVPAWLS 546
Query: 646 KHEASKFKPG 655
++ A G
Sbjct: 547 RYAARAIYSG 556
>gi|156083314|ref|XP_001609141.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796391|gb|EDO05573.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 994
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 251/428 (58%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFRE-DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ M E + FR+ + NI +G PRP+ N+++ L +L ++R Y+ P PIQM
Sbjct: 358 ITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPDPILSLLQRRNYEKPFPIQMQ 417
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
IP + RDV+ IAETGSGKT A++LP + ++ P + E EG +++APTRELA
Sbjct: 418 CIPALMCGRDVLAIAETGSGKTMAYLLPAIRHVLYQPKLREN---EGMIVLIIAPTRELA 474
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E+ K +GI+ ++ GG I EQ +++G E+V TPGRLI+ L +
Sbjct: 475 SQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVT 534
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + +VV+DEADRM D+GF PQ+ ++D N++P+ R T +FSA
Sbjct: 535 NLRRVTFVVIDEADRMFDLGFSPQISAIVD-----NIRPD------------RQTALFSA 577
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T PP +E LA+K L P+ + +G +GK+ + QHV+++ E +K L +LL E + +
Sbjct: 578 TFPPTIEALAKKILTKPLQIIVGESGKSASQVDQHVMVLPERQKMYALLKLLGEWHEHGS 637
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFVN + +AD + L K GY LHGG+ Q RE +L+ FR +L+AT +A R
Sbjct: 638 IIVFVNRQLDADSMYAELIKHGYDCAVLHGGQDQTDREFTLQDFRDGTKGILIATSIAAR 697
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
GID+ +V VINY P +IE Y HR+GRTGRAG G + TF+T + +D+ + + S
Sbjct: 698 GIDVKNVVLVINYATPDHIEDYVHRVGRTGRAGNIGTSYTFITPEEGAKSHDIIKAMKAS 757
Query: 637 NSPVPPEL 644
N VP EL
Sbjct: 758 NQVVPIEL 765
>gi|449515569|ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
sativus]
Length = 778
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 243/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R+ I++ G +P P ++ PE+LR V G+ P+PIQ + P+ LQ RD++
Sbjct: 143 YRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNAGFSAPTPIQAQSWPIALQSRDIV 202
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R+ + GP +V++PTRELA QI++E VKF
Sbjct: 203 AIAKTGSGKTLGYLIPGFIHLKRI----RNDPKLGPTVLVLSPTRELATQIQDEAVKFGK 258
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q I +G ++V+ATPGRL D LE R L+Q +Y+VLDEADR
Sbjct: 259 SSRISCACLYGGAPKGLQLRDIDRGVDIVVATPGRLNDILEMRRISLHQVSYLVLDEADR 318
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P+ R T M++AT P V ++A L
Sbjct: 319 MLDMGFEPQIRKIVKEVPAR-----------------RQTLMYTATWPKEVRKIASDLLV 361
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NP+ V IG + A + I+QH+ + EK RL+++L E G K I+F +TKK D
Sbjct: 362 NPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKV-IIFCSTKKMCD 420
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ +R+ L FRT R VLVATDVA RG+DI D+ VIN
Sbjct: 421 QLARNLTRQ-FGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 479
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TG+A TF D DL ++L +N VPPEL
Sbjct: 480 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPEL 535
>gi|393246045|gb|EJD53554.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 849
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 251/431 (58%), Gaps = 28/431 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ EM+E + + R + + I +G P+P+ WA L L ++R+ + P+PIQ
Sbjct: 154 VAEMSEEEADLLRLELDGIKIRGVDCPKPITKWAHCGLPASCLDVIKRLNFDRPTPIQSQ 213
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIGIA+TGSGKT AF+LP+ +I P+ EGP A+VM PTRELA
Sbjct: 214 AIPAIMSGRDVIGIAKTGSGKTIAFLLPLFRHIKDQRPL---ESMEGPMALVMTPTRELA 270
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F LG++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 271 VQIHRECKPFLKVLGLRAVCAYGGSPIKDQIAEMKKGTEIVVCTPGRMIDLLTANSGRVT 330
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSA
Sbjct: 331 NLKRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD------------RQTVLFSA 373
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
T P ++ LARK L+ P+ +T+G I Q V + E KF+RL +L ++ ++ A
Sbjct: 374 TFPKQMDSLARKILKKPLEITVGGKSVVAPEIEQIVEVRAEDTKFNRLLEILGQMYNEDA 433
Query: 518 ----IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
++FV+ +++AD + + L + GY V +LHGGK Q R+ +++ F+ ++ AT V
Sbjct: 434 ECRTLIFVDRQESADNLLRELIRKGYLVMSLHGGKDQVDRDSTIQDFKNGVVPIITATSV 493
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ + V+NYD P ++E Y HR GRTGRAG G TF+T D+ + L
Sbjct: 494 AARGLDVKQLKLVVNYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQEQYSVDIYRAL 553
Query: 634 IQSNSPVPPEL 644
SN+ VPPEL
Sbjct: 554 KASNAKVPPEL 564
>gi|356540089|ref|XP_003538523.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
max]
Length = 604
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 255/427 (59%), Gaps = 25/427 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P + +AE L L + + R Y P+P+Q AIP+ L RD++
Sbjct: 127 EDIPVETSGENVPPAVNTFAEIDLGDALSQNIRRCKYVKPTPVQRHAIPISLAGRDLMAC 186
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG-----PYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF P++ I R + G P A+V++PTREL+ QI EE K
Sbjct: 187 AQTGSGKTAAFCFPIINGIMRGQAQPLQRPPRGVRIVYPLALVLSPTRELSMQIHEEARK 246
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDE
Sbjct: 247 FSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 306
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA
Sbjct: 307 ADRMLDMGFEPQIRKIVEQM---DMPPAGA----------RQTMLFSATFPKEIQRLASD 353
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVN 522
+L N + + +G G +T+LI Q V ++ES+K S L LL + + K A+ VFV
Sbjct: 354 FLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQKANGVQGKQALTLVFVE 413
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L + + TT+HG ++Q++RE++L F++ +LVATDVA RG+DIP
Sbjct: 414 TKKGADSLEHWLCRNSFPATTIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPH 473
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
VAHV+N+D+P +I+ Y HRIGRTGRAGK G+AT F ++ + L ++ ++N VP
Sbjct: 474 VAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASLARALADLMQEANQEVPD 533
Query: 643 ELAKHEA 649
L+++ A
Sbjct: 534 WLSRYAA 540
>gi|440463671|gb|ELQ33225.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae Y34]
gi|440481910|gb|ELQ62446.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae P131]
Length = 1230
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 255/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSEK-KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L EMTE + R + + I G +P+P++ W+ LT +L + ++ Y P
Sbjct: 560 WVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKP 619
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+ IQM A+P+ + RDV+G+A+TGSGKT AF+LPM +I P+ + EGP +++
Sbjct: 620 TAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDN---EGPIGLILT 676
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI + F LG++ V GG I++Q +++G E+V+AT GR+ID L
Sbjct: 677 PTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAA 736
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + Y+VLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 737 NQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIF-----ANVRPD------------RQ 779
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NPV + +G I+Q V + E KF+RL LL E
Sbjct: 780 TVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGE 839
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D +++FV ++ AD + + L + GY +LHGGK Q R+ ++ F++ V
Sbjct: 840 LYKDDDDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPV 899
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
++AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 900 MIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEEQENCAI 959
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP +L
Sbjct: 960 GIAKALEQSGQPVPEKL 976
>gi|357130258|ref|XP_003566767.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like
[Brachypodium distachyon]
Length = 828
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 175/416 (42%), Positives = 249/416 (59%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ + G + ++L+ ++R G+ +P+PIQ + P+ LQ +DV+
Sbjct: 140 YRRRHEITVIGDNVPAPITAFDSGVIPSDILKEIQRAGFPSPTPIQAQSWPIALQNQDVV 199
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP +I RL + + GP +V+APTRELA QI EE VKF
Sbjct: 200 AIAKTGSGKTLGYLLPGFMHIKRL----QNSTRSGPTVLVLAPTRELATQILEEAVKFGR 255
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G +VV+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 256 SSRISSTCLYGGAPKGPQLRDLERGVDVVVATPGRLNDILEMRKISLKQVSYLVLDEADR 315
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +PSS R T M++AT P V R+A + L
Sbjct: 316 MLDMGFEPQIRKIVKDIPSS-----------------RQTLMYTATWPKEVRRIADELLV 358
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
+PV VTIG+ + A + I+QHV ++ SEK RL+++L + G K ++F TK+ D
Sbjct: 359 HPVQVTIGSVDELVANKAITQHVEVITPSEKLRRLEQILRSHDSGSKI-LIFCTTKRMCD 417
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+++ L++ + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VIN
Sbjct: 418 QLSRTLNRH-FGAAAIHGDKSQNEREKVLSQFRSGRSPILVATDVAARGLDIKDIRVVIN 476
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TG+A TFL D DL ++L ++ VP EL
Sbjct: 477 YDFPTGVEDYVHRIGRTGRAGATGLAYTFLCDQDAKYAADLIKILEGADQDVPREL 532
>gi|449446676|ref|XP_004141097.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
46-like [Cucumis sativus]
Length = 785
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 243/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R+ I++ G +P P ++ PE+LR V G+ P+PIQ + P+ LQ RD++
Sbjct: 150 YRQRHEITFSGDNVPAPFSSFEATGFPPEILREVHNAGFSAPTPIQAQSWPIALQSRDIV 209
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R+ + GP +V++PTRELA QI++E VKF
Sbjct: 210 AIAKTGSGKTLGYLIPGFIHLKRI----RNDPKLGPTVLVLSPTRELATQIQDEAVKFGK 265
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q I +G ++V+ATPGRL D LE R L+Q +Y+VLDEADR
Sbjct: 266 SSRISCACLYGGAPKGLQLRDIDRGVDIVVATPGRLNDILEMRRISLHQVSYLVLDEADR 325
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P+ R T M++AT P V ++A L
Sbjct: 326 MLDMGFEPQIRKIVKEVPAR-----------------RQTLMYTATWPKEVRKIASDLLV 368
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NP+ V IG + A + I+QH+ + EK RL+++L E G K I+F +TKK D
Sbjct: 369 NPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSKV-IIFCSTKKMCD 427
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ +R+ L FRT R VLVATDVA RG+DI D+ VIN
Sbjct: 428 QLARNLTRQ-FGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARGLDIKDIRVVIN 486
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TG+A TF D DL ++L +N VPPEL
Sbjct: 487 YDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGANQRVPPEL 542
>gi|327351907|gb|EGE80764.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1205
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/446 (39%), Positives = 256/446 (57%), Gaps = 32/446 (7%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+ F R D + L E+T+ + R + + I +G +P+P++ W++ L + L
Sbjct: 528 YEPF--RKDFYTEPVDLSELTDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLD 585
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+ ++ Y+NP+ IQ AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN
Sbjct: 586 VIRKLNYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRPL--EN- 642
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP ++M PTRELA QI +E F L ++ V GG I++Q +++G E+V+ T
Sbjct: 643 MEGPIGLIMTPTRELATQIHKECKPFLKALSLRAVCAYGGAPIKDQIAELKRGAEIVVCT 702
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ +L N++P+
Sbjct: 703 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIL-----GNVRPQ---- 753
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P +E LARK L PV + +G I+Q V + E K
Sbjct: 754 --------RQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAPEITQVVEVRNEDTK 805
Query: 502 FSRLQRLLDEL------GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
F RL LL +L D A++FV+ ++ AD + ++L GY ++HGGK Q R+
Sbjct: 806 FVRLLALLGDLYADDKNEDARALIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDS 865
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+++ F+ + +L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 866 TIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAV 925
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP 641
TFLT D+ + L QS PVP
Sbjct: 926 TFLTEDQERYSVDISKALKQSGQPVP 951
>gi|239613405|gb|EEQ90392.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ER-3]
Length = 1197
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/446 (39%), Positives = 256/446 (57%), Gaps = 32/446 (7%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+ F R D + L E+T+ + R + + I +G +P+P++ W++ L + L
Sbjct: 520 YEPF--RKDFYTEPVDLSELTDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLD 577
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+ ++ Y+NP+ IQ AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN
Sbjct: 578 VIRKLNYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRPL--EN- 634
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP ++M PTRELA QI +E F L ++ V GG I++Q +++G E+V+ T
Sbjct: 635 MEGPIGLIMTPTRELATQIHKECKPFLKALSLRAVCAYGGAPIKDQIAELKRGAEIVVCT 694
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ +L N++P+
Sbjct: 695 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIL-----GNVRPQ---- 745
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P +E LARK L PV + +G I+Q V + E K
Sbjct: 746 --------RQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAPEITQVVEVRNEDTK 797
Query: 502 FSRLQRLLDEL------GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
F RL LL +L D A++FV+ ++ AD + ++L GY ++HGGK Q R+
Sbjct: 798 FVRLLALLGDLYADDKNEDARALIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDS 857
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+++ F+ + +L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 858 TIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAV 917
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP 641
TFLT D+ + L QS PVP
Sbjct: 918 TFLTEDQERYSVDISKALKQSGQPVP 943
>gi|195588318|ref|XP_002083905.1| GD13105 [Drosophila simulans]
gi|194195914|gb|EDX09490.1| GD13105 [Drosophila simulans]
Length = 814
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 250/429 (58%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + + R F I+ KG ++P P + EG ++ + + G+ P+ IQ
Sbjct: 123 KPCDSVLARTAETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQA 182
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
P+ + RD++G+A+TGSGKT A+VLP + +I+ P + +GP A+V+APTREL
Sbjct: 183 QGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTREL 239
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQI++ ++F ++ I GG +Q + +G E+VIATPGRLID LER L
Sbjct: 240 AQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSL 299
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATM 459
+C Y+VLDEADRM+DMGFEPQ+ ++ ++P+ R M+SAT
Sbjct: 300 KRCTYLVLDEADRMLDMGFEPQIRKIMQ-----QIRPD------------RQVLMWSATW 342
Query: 460 PPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DK 515
P V +LA ++L N + V IG+ A I Q V + E+EK +L +LL ++ +
Sbjct: 343 PKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENET 402
Query: 516 TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I+FV TKK D + +N+ + G+R +HG KSQ++R+ L FR R+++LVATDVA
Sbjct: 403 KTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAA 462
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ DV VINYD P N E Y HRIGRTGR+ TG A T T + + DL Q+L +
Sbjct: 463 RGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLRE 522
Query: 636 SNSPVPPEL 644
+N + P+L
Sbjct: 523 ANQTINPKL 531
>gi|390600057|gb|EIN09452.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 639
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 252/422 (59%), Gaps = 25/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G+ +P P+ + L P LL + Y P+P+Q ++P+ RD++
Sbjct: 150 EDIPIEATGAGVPEPVNEFTSPPLDPVLLENIAYARYTRPTPVQKYSVPIVAAGRDLMAC 209
Query: 295 AETGSGKTAAFVLPML----TYISRLPPISEEN-------EAEGPYAVVMAPTRELAQQI 343
A+TGSGKT F+ P+L T R PP+ E N P A+++APTREL QI
Sbjct: 210 AQTGSGKTGGFLFPILSSSFTNGPRAPPVEESNGYGYGRARKAYPTALILAPTRELVSQI 269
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCN 403
EE KFA+ ++ + GG I +Q I +GC+++ ATPGRL+D +ER L
Sbjct: 270 HEEARKFAYRSWVRPAVVYGGADINQQLRTIERGCDLLSATPGRLVDLIERGRISLANVK 329
Query: 404 YVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
Y+VLDEADRM+DMGFEPQ+ ++ + ED + R T MFSAT P +
Sbjct: 330 YLVLDEADRMLDMGFEPQIRRIV----------QGEDMPGVQDR---QTLMFSATFPRDI 376
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKTAIVFVN 522
+ LAR +L++ + +++G G +E I+Q + +++ +K S L +L + +VFV
Sbjct: 377 QMLARDFLKDYIFLSVGRVGSTSENITQRIEFVEDHDKRSMLLDILTAQEKQGLTLVFVE 436
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TK+ ADM++ L + + T++HG ++Q +RE++L+ FRT R +LVAT VA RG+DIP+
Sbjct: 437 TKRMADMLSDFLYQSQFPATSIHGDRTQREREMALQTFRTGRTPILVATAVAARGLDIPN 496
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V HVINYD+P +I+ Y HRIGRTGRAG TGVAT F + + ++ DL ++L ++N +PP
Sbjct: 497 VTHVINYDLPTDIDDYVHRIGRTGRAGNTGVATAFFNYGNKNIVKDLMELLREANQDIPP 556
Query: 643 EL 644
L
Sbjct: 557 WL 558
>gi|328876634|gb|EGG24997.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 267/461 (57%), Gaps = 36/461 (7%)
Query: 219 EKKLEEMTERDWRIFREDFNI---SYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
+ ++ M++ + R +RE I S K + IP P+ ++ ++ + +G+ P+
Sbjct: 367 DSEVSAMSQDEVRQYREKHEITVFSAKNNDIPNPITSFGFSHFPSYIMSEIAVLGFTAPT 426
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAP 335
IQ + P+ L+ RD+IG+AETGSGKT AF+LP + +I+ P + +GP +V+ P
Sbjct: 427 SIQCQSWPIALKGRDMIGLAETGSGKTLAFLLPAIVHINAQPYL---ETGDGPIVLVLTP 483
Query: 336 TRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
TRELA QI+ E KF IK I GG +Q +R G E+V+ATPGRLID LER
Sbjct: 484 TRELAMQIQNECDKFGSSSKIKNCCIYGGVPKYQQAQALRSGVEIVVATPGRLIDFLERG 543
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMF 455
L + Y+VLDEADRM+DMGFE Q+ +L ++P+ + T MF
Sbjct: 544 GTNLRRVTYLVLDEADRMLDMGFEDQIRKIL-----GQIRPDKQ------------TLMF 586
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDEL-- 512
SAT P +V+ LA +L +P+ V IG+A A ++QH+ + ++ +K ++L + L +
Sbjct: 587 SATWPKSVQSLAADFLVDPIQVKIGSAELSANHKVTQHIEICEKMDKQTKLFQYLKSIEP 646
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
G K I+F+ TK M+A+N+ G++ +HG K+Q +R+ +L F+ + L+ATD
Sbjct: 647 GAK-CIIFLETKSGVGMLARNMSYAGFKCEAIHGDKTQGERDFALSQFKDGKIQCLIATD 705
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VA RG+D+ D+ +VINYD P IE Y HRIGRTGRAG TG A T T D + DL +
Sbjct: 706 VASRGLDVKDIKYVINYDFPNTIESYIHRIGRTGRAGATGTAYTLFTLDDMRLASDLVTV 765
Query: 633 LIQSNSPVPPELAKHEASKFKPGTIPD-------RPPRRND 666
L +++ VPP+L + +KFK +I D P RRN+
Sbjct: 766 LAEASQYVPPQLEQMVPNKFK--SITDYKSQNRYNPYRRNN 804
>gi|301615062|ref|XP_002936986.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Xenopus
(Silurana) tropicalis]
Length = 614
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 265/471 (56%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSE-KKLEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W + + EM+E R ++I +G
Sbjct: 109 LESVTEGRALMSVKEMAKGI--TYDDPIKTSWKPPRHILEMSEARHDRVRSKYHILVEGE 166
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
+IP+P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 167 RIPQPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 226
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL------ 354
F LP++ + RLP + EGPY +++ P+RELA+Q + H L
Sbjct: 227 FTLPVIMFCLEQEKRLP----FAKREGPYGLIICPSRELARQTHSIIEYYCHLLQEDNFP 282
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ I+QG +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 283 HLRTALCIGGMSVKEQMETIKQGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 342
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 343 DMGFEEDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 385
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
+ + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 386 ITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 444
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR ++ +VLVATDVA +G+D P + HV+NYDMP
Sbjct: 445 LLKGVEAVAIHGGKDQEERTKAIEAFREEKKDVLVATDVASKGLDFPAIQHVVNYDMPEE 504
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 505 IENYVHRIGRTGRSGNTGIATTFINKSCDESVLMDLKALLMEAKQRVPPVL 555
>gi|261194749|ref|XP_002623779.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
gi|239588317|gb|EEQ70960.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
Length = 1197
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/446 (39%), Positives = 256/446 (57%), Gaps = 32/446 (7%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+ F R D + L E+T+ + R + + I +G +P+P++ W++ L + L
Sbjct: 520 YEPF--RKDFYTEPVDLSELTDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLD 577
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
+ ++ Y+NP+ IQ AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN
Sbjct: 578 VIRKLNYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRPL--EN- 634
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP ++M PTRELA QI +E F L ++ V GG I++Q +++G E+V+ T
Sbjct: 635 MEGPIGLIMTPTRELATQIHKECKPFLKALSLRAVCAYGGAPIKDQIAELKRGAEIVVCT 694
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ +L N++P+
Sbjct: 695 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIL-----GNVRPQ---- 745
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P +E LARK L PV + +G I+Q V + E K
Sbjct: 746 --------RQTVLFSATFPRNMEALARKTLTKPVEIIVGGRSVVAPEITQVVEVRNEDTK 797
Query: 502 FSRLQRLLDEL------GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
F RL LL +L D A++FV+ ++ AD + ++L GY ++HGGK Q R+
Sbjct: 798 FVRLLALLGDLYADDKNEDARALIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDS 857
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
+++ F+ + +L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 858 TIDDFKAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAV 917
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP 641
TFLT D+ + L QS PVP
Sbjct: 918 TFLTEDQERYSVDISKALKQSGQPVP 943
>gi|313241110|emb|CBY33407.1| unnamed protein product [Oikopleura dioica]
Length = 847
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/430 (39%), Positives = 249/430 (57%), Gaps = 32/430 (7%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
E KL+ TE D + +G P+P++ WA+ + ++L ++R+ ++ P+PIQ
Sbjct: 324 EVKLQRATELD--------GVRIRGKNCPKPIKTWAQSGCSSKVLTLIKRMKFEKPTPIQ 375
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
+P + RDVIGIA+TGSGKT FVLPML ++ E + EGP AV+M PTRE
Sbjct: 376 AQCLPAIMSGRDVIGIAKTGSGKTLGFVLPMLRHMEHQ---REVEKGEGPIAVIMTPTRE 432
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---R 395
LA QI ++T KFA+++ + V + GG I EQ +++G E++I TPGR+ID L R
Sbjct: 433 LAIQITKDTRKFANHMRWRTVCVYGGTGISEQISELKRGAEIIICTPGRMIDMLAANNGR 492
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMF 455
L +C Y VLDEADRM DMGFEPQV+ +L++ ++P+ R +F
Sbjct: 493 VTNLRRCTYCVLDEADRMFDMGFEPQVMHILNS-----VRPD------------RQLVLF 535
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK 515
SAT P ++E LAR+ L P+ +T+G + + Q+VV++ + +KF +L LL +
Sbjct: 536 SATFPRSMEALARRILTKPLEITVGGKSVVCDDVQQNVVVLNDEDKFLKLLELLGRFQES 595
Query: 516 -TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVF + + AD + K + K GY LHGG Q R+ + F+ N+L+AT VA
Sbjct: 596 GSVIVFTHKHEVADALLKEVLKAGYPAQALHGGMDQYDRDSVINDFKKGVSNLLIATSVA 655
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ ++ V+N+D P + E Y HR GRTGRAG G A TFLT + D+ + L
Sbjct: 656 ARGLDVKNLILVVNFDCPNHYEDYVHRCGRTGRAGNKGTAYTFLTEEEGKYAGDIIKALE 715
Query: 635 QSNSPVPPEL 644
S + VP L
Sbjct: 716 MSKAEVPKHL 725
>gi|357445503|ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1148
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 256/429 (59%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ +MT + +R+ + G +P+P+++W + LT ++L +++ ++ P PIQ
Sbjct: 502 KEVSKMTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMPIQA 561
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IG+A+TGSGKT AFVLPML +I PP+ +GP ++MAPTREL
Sbjct: 562 QALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVV---GDGPIGLIMAPTREL 618
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QQI + KF +GI+ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 619 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKI 678
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 679 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPD------------RQTVLFS 721
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + E+E+F RL LL E +K
Sbjct: 722 ATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEKG 781
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV+++ D + K+L K GY +LHG K Q RE ++ F++ N+LVAT +A
Sbjct: 782 KILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLVATSIAA 841
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ VIN+D+P + E Y HR+GRTGRAG+ G A TF++ D DL + L
Sbjct: 842 RGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALEL 901
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 902 SEQIVPDDL 910
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 256/428 (59%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT + +R + I+ KG P+P+++W + ++ ++L ++++ Y+ P+PIQ
Sbjct: 341 LAKMTTEEVNSYRLELEGITVKGKNCPKPIKSWVQCGISMKILNSLKKHAYEKPTPIQAQ 400
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E EGP AV+M PTRELA
Sbjct: 401 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEE---GEGPIAVIMTPTRELA 457
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 458 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT 517
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 518 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NIRPD------------RQTVMFSA 560
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
T P A+E LAR+ L P+ V +G + QHV++++E +KF +L LL +K A
Sbjct: 561 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLELLGHYQEKGA 620
Query: 518 -IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 621 VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGVCKLLVATSVAAR 680
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + VINY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 681 GLDVKQLILVINYACPNHYEDYVHRAGRTGRAGNKGYAFTFITEDQARYAGDIIKALELS 740
Query: 637 NSPVPPEL 644
+ VP EL
Sbjct: 741 GTAVPAEL 748
>gi|357017643|gb|AET50850.1| hypothetical protein [Eimeria tenella]
Length = 693
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 244/441 (55%), Gaps = 26/441 (5%)
Query: 212 RVDRHWS-EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
R+ W+ K EMTE + + RE F + G+ +P P RN+ + +L A+++
Sbjct: 204 RMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALKKKN 263
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYA 330
P+ IQM IP LQ RD+IGIA TGSGKT F LPML S EGP+
Sbjct: 264 ITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEGPWG 323
Query: 331 VVMAPTRELAQQIEEETVKFA------HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
+V+ P+RELA Q + FA Y ++ + ++GG S +EQ IR G V+AT
Sbjct: 324 LVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCVVAT 383
Query: 385 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
PGRL D L +R LNQC Y+ DEADRM+DMGFE +V VLD
Sbjct: 384 PGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLDCFGHQ------------ 431
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
R T +FSATMP ++ A+ L +P+VV +G AG A + Q V +K+ K
Sbjct: 432 -----RQTLLFSATMPRKIQEFAKSALVDPIVVNVGRAGAANLDVIQEVEYVKQENKLPY 486
Query: 505 LQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L L + + A+VF KK+ D + + L G +HGG +QE+R ++ F+ R
Sbjct: 487 LLHCLQKT-EPPALVFCENKKDVDDIQEYLLLKGVEAVAIHGGLAQEERSEAIRLFKEGR 545
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+VLV TDVA +G+D P + HVIN+DMP IE Y HRIGRTGR G+TGVATTF+ + +
Sbjct: 546 KDVLVGTDVASKGLDFPAIQHVINFDMPKEIENYVHRIGRTGRCGRTGVATTFINKNSEE 605
Query: 625 -VFYDLKQMLIQSNSPVPPEL 644
V DLK +LI++ +PP L
Sbjct: 606 TVLLDLKALLIEAGQRIPPFL 626
>gi|307110010|gb|EFN58247.1| hypothetical protein CHLNCDRAFT_30080, partial [Chlorella
variabilis]
Length = 551
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 253/434 (58%), Gaps = 22/434 (5%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
+E + R +RE I G IP+P+ N+ E +L ++R G+ PSPIQ P+
Sbjct: 103 SEEEVRRYREMREIHVTGEGIPKPVSNFEEASFPEYVLAEIQRAGFTEPSPIQAQGWPMA 162
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD++GIAETGSGKT A++LP + +I+ +S +GP + +APTRELA QI+
Sbjct: 163 LLGRDLVGIAETGSGKTLAYLLPGVVHINAQAHLSP---GDGPIVLCLAPTRELAVQIQN 219
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E +F IK + GG Q +R+G E+VIATPGRLID LE R L + Y+
Sbjct: 220 ECARFGSTSRIKSTCVYGGAPKGPQANDLRRGVEIVIATPGRLIDFLESRTTNLRRVTYL 279
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ ++P+ R T ++SAT P ++
Sbjct: 280 VLDEADRMLDMGFEPQIRKIV-----GQIRPD------------RQTLLWSATWPKEIQT 322
Query: 466 LARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLD-ELGDKTAIVFVNT 523
LAR++L NP V IG+ KA I+Q E EK+ +L R+L+ E+ + ++F+ T
Sbjct: 323 LAREFLNNPYQVLIGSPDLKANHRITQIFDFPAEHEKYQKLVRVLEKEMDGRRILIFLET 382
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
KK D V + L G+ ++HG KSQ +R+ L F+ ++ +++ATDVA RG+D+ D+
Sbjct: 383 KKGCDAVTRQLRMDGWPALSIHGDKSQHERDWVLAEFKAGKHPIMIATDVAARGLDVKDI 442
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
VINYDMP E Y HRIGRTGRAG +G A +F T + + L Q+L +++ VPPE
Sbjct: 443 KMVINYDMPSCAEDYVHRIGRTGRAGASGAAYSFFTAANGRMARQLVQILEEASQAVPPE 502
Query: 644 LAKHEASKFKPGTI 657
L + + P +
Sbjct: 503 LRQFAMTSGGPTSF 516
>gi|302782918|ref|XP_002973232.1| hypothetical protein SELMODRAFT_267628 [Selaginella moellendorffii]
gi|300158985|gb|EFJ25606.1| hypothetical protein SELMODRAFT_267628 [Selaginella moellendorffii]
Length = 597
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 249/420 (59%), Gaps = 25/420 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + GS IP + +AE L ++R + P+P+Q AIP+ L RD++
Sbjct: 134 EDIPVEASGSDIPAAVGTFAEIDFGTALDENIKRCKFVKPTPVQRHAIPIALAGRDLMAC 193
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEE-NEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
A+TGSGKT AF P++ I R PP P A++++PTREL+ QI +E KFA+
Sbjct: 194 AQTGSGKTLAFCFPIIAGILRDPPRQRPRGRWACPLALILSPTRELSAQIHDEAKKFAYR 253
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
G+KVV GG I Q + +G ++++ATPGRL D +ER L+ Y+ LDEADRM
Sbjct: 254 TGLKVVVAYGGAQISLQMRELERGVDILVATPGRLHDLMERGRVALSMIKYLALDEADRM 313
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
+DMGFEPQ+ +++ +S++ P + R T +FSAT P ++ LA +L N
Sbjct: 314 LDMGFEPQIRKIVE---TSDMPPPGQ----------RQTMLFSATFPRTIQSLAADFLHN 360
Query: 474 PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT---------AIVFVNTK 524
+ + +G G +T+LI Q V ++E+EK S L ++ G K +VFV TK
Sbjct: 361 YIFLAVGRVGSSTDLIVQRVERVQEAEKRSLLMDIIH--GQKAIGANGQPPLMLVFVETK 418
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD + L + G+ TT+HG ++Q +RE +L FRT +LVATDVA RG+DIP VA
Sbjct: 419 RGADALEDWLIRSGFPATTIHGDRTQPEREQALRCFRTGMTPILVATDVAARGLDIPHVA 478
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HVINYD+P +I+ Y HRIGRTGRAG +G+AT F T D+ + L +++ +S+ VP L
Sbjct: 479 HVINYDLPSDIDDYVHRIGRTGRAGNSGLATAFFTDKDSGLAKPLAELMQESSQEVPSWL 538
>gi|224121758|ref|XP_002318665.1| predicted protein [Populus trichocarpa]
gi|222859338|gb|EEE96885.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 261/432 (60%), Gaps = 22/432 (5%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
++ + ++E + ++R I+ +G +P+P+R + E L+ + ++G+ P+
Sbjct: 85 YFENPSIRALSEHEVVMYRTRREITVEGHDVPKPIRLFHEANFPDYCLQVIAKLGFVEPT 144
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAP 335
PIQ P+ L+ RD+IGIAETGSGKT A++LP +++ P + + +GP +V+AP
Sbjct: 145 PIQAQGWPMALKGRDLIGIAETGSGKTLAYMLPAFVHVAAQPRLVQ---GDGPIVLVLAP 201
Query: 336 TRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
TRELA QI+EE +KF I+ I GG Q +++G E+VIATPGRLID LE +
Sbjct: 202 TRELAVQIQEEGLKFGSPANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDMLEAQ 261
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMF 455
+ L + Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +
Sbjct: 262 HTNLRRVTYLVLDEADRMLDMGFEPQIRKII-----SQIRPD------------RQTLYW 304
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGD 514
SAT P VE LAR++L N V IG+A KA + I+Q V ++ + EK++RL +LL E+ D
Sbjct: 305 SATWPREVEILARQFLHNAYKVIIGSADLKANQSINQVVEVIMDMEKYNRLIKLLKEVMD 364
Query: 515 KTAI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
+ I +F+ TKK D V + L G+ ++HG K+Q +R+ L F++ R ++ ATDV
Sbjct: 365 GSRILIFMETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSAIMTATDV 424
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ D+ VINYD P ++E Y HRIGRTGRAG G A TF T + L ++L
Sbjct: 425 AARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGARGTAFTFFTDSNAKFARGLIRIL 484
Query: 634 IQSNSPVPPELA 645
+S VPP L+
Sbjct: 485 QESGQIVPPALS 496
>gi|302783318|ref|XP_002973432.1| hypothetical protein SELMODRAFT_52088 [Selaginella moellendorffii]
gi|300159185|gb|EFJ25806.1| hypothetical protein SELMODRAFT_52088 [Selaginella moellendorffii]
Length = 506
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 255/426 (59%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G IP + ++A+ L P L + R + P+P+Q AIP+ L RD++
Sbjct: 36 DDIPVEASGENIPPAITSFADVDLGPVLNENIRRCKFVKPTPVQKHAIPISLHGRDLMAC 95
Query: 295 AETGSGKTAAFVLPMLTYI-SRLPPISEENEAE---GPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P++ I PP S P A++++PTREL+ QI +E KF
Sbjct: 96 AQTGSGKTAAFCFPIIAGILWNFPPGSRHARGSRKAFPLALILSPTRELSSQIHDEAKKF 155
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
A+ G+KVV I GG S++ Q + +G ++++ATPGRL D ++R L+ Y+ LDEA
Sbjct: 156 AYQTGVKVVVIYGGTSVQSQLKELERGVDILVATPGRLDDLMQRGRISLSLVRYLALDEA 215
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQ+ +++ ++++ P + R T +FSAT P ++RLA +
Sbjct: 216 DRMLDMGFEPQIRKIVE---NTDMPPAGQ----------RQTMLFSATFPREIQRLAADF 262
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKT--AIVFVNT 523
L N + + +G G +T+LI Q V + + +K S L ++ + L + +VFV T
Sbjct: 263 LYNYIFLAVGRVGSSTDLIVQRVEYVHDVDKRSMLMDMIHAQKPNGLNGQLPLILVFVET 322
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L ++G TT+HG ++Q +RE +L FRT +LVATDVA RG+DIP V
Sbjct: 323 KRGADSLEDWLIQMGISATTIHGDRTQVEREHALRSFRTGVTPILVATDVAARGLDIPHV 382
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHVINYD+P +I+ Y HRIGRTGRAGK+G AT F T DT + L ++ ++N VP
Sbjct: 383 AHVINYDLPSDIDDYVHRIGRTGRAGKSGFATAFFTDKDTSLARPLVDLMQEANQQVPEW 442
Query: 644 LAKHEA 649
LA A
Sbjct: 443 LASCAA 448
>gi|312372785|gb|EFR20671.1| hypothetical protein AND_19720 [Anopheles darlingi]
Length = 1061
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 255/437 (58%), Gaps = 27/437 (6%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
+ G P + ++A+ L LL V R GY P+PIQ AIP+ L+ RD++G A+TG
Sbjct: 105 VKISGENPPAHIESFAQSGLNEVLLNNVRRSGYNKPTPIQRHAIPIVLKGRDMMGCAQTG 164
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKTAAF+LPM+ +I L + PY +V+APTREL QI +E KF+H G+KV
Sbjct: 165 SGKTAAFMLPMIDWI--LGQQDLQLHHRQPYVLVVAPTRELVIQIHDEARKFSHGTGLKV 222
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
V I GG + Q +R GC++++ATPGRL+D ++R + YVVLDEADRM+DMGF
Sbjct: 223 VCIYGGAASTHQLQMLRGGCQIMVATPGRLLDFMDRGVVSFEKVKYVVLDEADRMLDMGF 282
Query: 419 EPQVVGVLD--AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVV 476
P + V+ MPS + R T MFSAT P +++LA +L N +
Sbjct: 283 LPAIEKVMGNATMPSKD---------------QRQTLMFSATFAPDIQQLAGVFLNNYIY 327
Query: 477 VTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK 536
V +G G A + Q V +++ +K +L+ LL E + +VFV TK++AD +A + +
Sbjct: 328 VAVGIVGGACGDVEQVVYEVEKFKKRKKLEELLGEGNARGTLVFVETKRSADYLASLMSE 387
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
+ T++HG + Q +RE++L+ F+ R +VL+AT VA RG+DI +V+HV+NYD+P NI+
Sbjct: 388 TKFPTTSIHGDRLQREREMALKDFKEGRMDVLIATSVAARGLDIKNVSHVVNYDLPKNID 447
Query: 597 MYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPELAKHEAS----- 650
Y HRIGRTGR G G AT+F D + DL ++L Q+N V P+ KH A
Sbjct: 448 DYVHRIGRTGRVGNKGRATSFYDPTADYAIAGDLVKILQQANQTV-PDFLKHLADGGGGG 506
Query: 651 -KFKPGTIPDRPPRRND 666
F T R R D
Sbjct: 507 GAFNGSTFGGRDIRDTD 523
>gi|225559706|gb|EEH07988.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
capsulatus G186AR]
Length = 1201
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 250/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+TE + R + + I +G +P+P++ W++ L + L + ++ Y+NP+ IQ
Sbjct: 536 LAELTEEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQ 595
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 596 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRPL--EN-MEGPIGLIMTPTRELA 652
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 653 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVT 712
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P+ R T +FSA
Sbjct: 713 NLRRVTYVVLDEADRMFDMGFEPQVMRIL-----GNVRPQ------------RQTVLFSA 755
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G I+Q V + + KF RL LL EL
Sbjct: 756 TFPRNMEALARKTLAKPVEIIVGGKSVVAPEITQIVEVRNQDTKFVRLLALLGELYADDK 815
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 816 NEDARALIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDSTIDDFKAGVFPILIAT 875
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 876 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 935
Query: 632 MLIQSNSPVP 641
L QS PVP
Sbjct: 936 ALKQSGQPVP 945
>gi|440295406|gb|ELP88319.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 571
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 254/431 (58%), Gaps = 19/431 (4%)
Query: 217 W-SEKKLEEMTERDWRIFREDFNISYKGSKIP-RPMRNWAEGKLTPELLRAVERVGYKNP 274
W S+ K E D + ++ I G+ +P + + + + + EL + + G+ +P
Sbjct: 87 WLSDTKEEREKMADATLNYDNLKIEVTGNNVPQKELETFYDIDMGEELDDNIFKAGFNHP 146
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE---NEAEGPYAV 331
P+Q A IP+ L +RD++ A+TGSGKTAAF+ P+++ I + PP+ + + P A+
Sbjct: 147 MPVQKATIPVILARRDLMSCAQTGSGKTAAFLFPIISDILQNPPMPHQMSRHVTVFPSAL 206
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTREL QQI EE VKF IK V + GG Q + +GC++++ATPGRL+
Sbjct: 207 ILAPTRELGQQIHEEAVKFTQNTPIKSVCVHGGSETYPQIQEMGKGCDILVATPGRLLHF 266
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ER+ L+ +++ DEADRM+DMGFEPQ+ + D D E+ + + R
Sbjct: 267 MERKIVCLSSVRFLIFDEADRMLDMGFEPQIRQICD------------DGEMPKVGV-RQ 313
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T MFSAT P +++LA +L + V +T+G G E I Q ++ + E +K + +L+
Sbjct: 314 TLMFSATFPRPIQKLASDFLDDYVFITVGRVGSTVESIEQDILWVDERQKEEAVIDVLEN 373
Query: 512 LG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVA 570
G DK ++FV TK+ ADM+ L GY V ++HG +SQ R+ SL F+ + +LVA
Sbjct: 374 FGKDKKGVIFVETKRGADMLENYLYDKGYMVDSIHGDRSQSDRDFSLARFKENKIQLLVA 433
Query: 571 TDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLK 630
TDVA RG+DIPD+ VINYDMP IE Y HR+GRTGRAGK G+A TF+ ++ L
Sbjct: 434 TDVASRGLDIPDIEIVINYDMPNEIESYVHRVGRTGRAGKKGIAVTFINEKTQNLIPALV 493
Query: 631 QMLIQSNSPVP 641
++ +S VP
Sbjct: 494 SLMEESKQSVP 504
>gi|195439780|ref|XP_002067737.1| GK12550 [Drosophila willistoni]
gi|194163822|gb|EDW78723.1| GK12550 [Drosophila willistoni]
Length = 800
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 244/410 (59%), Gaps = 24/410 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I+ KG ++P P + EG ++ V + G+ P+ IQ P+ L RD++G+A+TG
Sbjct: 122 ITIKGIEVPTPSIAFEEGGFPDYVMNEVRKQGFAKPTAIQAQGWPIALSGRDLVGVAQTG 181
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A++LP + +I+ P + +GP A+V+APTRELAQQI++ +F ++
Sbjct: 182 SGKTLAYILPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQVASEFGSNTQVRN 238
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
I GG +Q + +G E+VIATPGRLID LER L +C Y+VLDEADRM+DMGF
Sbjct: 239 TCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGF 298
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ ++ ++P+ R M+SAT P V +LA ++L N + V
Sbjct: 299 EPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQLAEEFLNNYIQVN 341
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNADMVAKNL 534
IG+ A I Q V + ESEK +L LL ++ ++ I+FV TKK D + +N+
Sbjct: 342 IGSLSLSANHNIRQIVDVCDESEKIVKLINLLTDISAESETKTIIFVETKKRVDEITRNI 401
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+ G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+ DV VINYD P N
Sbjct: 402 SRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSN 461
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HRIGRTGR+ TG A T T + + DL Q+L ++N + P+L
Sbjct: 462 SEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKL 511
>gi|325089715|gb|EGC43025.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H88]
Length = 1199
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 250/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+TE + R + + I +G +P+P++ W++ L + L + ++ Y+NP+ IQ
Sbjct: 534 LAELTEEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQ 593
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 594 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRPL--EN-MEGPIGLIMTPTRELA 650
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 651 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVT 710
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P+ R T +FSA
Sbjct: 711 NLRRVTYVVLDEADRMFDMGFEPQVMRIL-----GNVRPQ------------RQTVLFSA 753
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G I+Q V + + KF RL LL EL
Sbjct: 754 TFPRNMEALARKTLAKPVEIIVGGKSVVAPEITQIVEVRNQDTKFVRLLALLGELYADDK 813
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 814 NEDARALIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDSTIDDFKAGVFPILIAT 873
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 874 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 933
Query: 632 MLIQSNSPVP 641
L QS PVP
Sbjct: 934 ALKQSGQPVP 943
>gi|358332200|dbj|GAA50893.1| ATP-dependent RNA helicase DDX5/DBP2 [Clonorchis sinensis]
Length = 887
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/413 (41%), Positives = 247/413 (59%), Gaps = 21/413 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR ++ ++ G IPRP+ ++ E L +LR + G+ P+PIQ +P+GL RDV+
Sbjct: 356 FRTEYKMTLSGPNIPRPVLSFGELNLPDHVLRVIASNGWHGPTPIQAQGLPMGLSGRDVV 415
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTA+F++P + +I P + EGP +V+ PTRELAQQ+ +FA
Sbjct: 416 GIAQTGSGKTASFIIPAIVHILAQPRLLR---GEGPICLVLVPTRELAQQVLSVAQQFAT 472
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ + GG S Q +++G E+ IATPGRLID + +L++ Y+VLDEADR
Sbjct: 473 AAGLRTMCFYGGASRGPQLRDLQRGGEMCIATPGRLIDFIRSEKKLLSRVTYLVLDEADR 532
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ SN++P+ R T M+SAT P V+ LAR +L
Sbjct: 533 MLDMGFEPQIRTII-----SNIRPD------------RQTLMWSATWPREVQGLARDFLT 575
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
N + V IG+ A I+Q V ++ E +K RL +LL G + +VFV TK+ D +
Sbjct: 576 NYIQVNIGSVSLHANPNITQIVEIIDEWDKEQRLIQLLTMFGRERCLVFVETKRKTDQIT 635
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
L + G+ V +HG K Q RE++L FR R +VLVATDVA RG+DI D+ +VIN+D
Sbjct: 636 YTLRRRGFAVGAMHGDKQQRDREMTLGSFRDGRLSVLVATDVASRGLDIDDIQYVINFDF 695
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P E Y HRIGRT R+ K G A TF T + +L ++L ++N V PEL
Sbjct: 696 PNQTEDYIHRIGRTARSDKKGTAFTFFTSKNLRQARELIEILEEANQEVNPEL 748
>gi|256074313|ref|XP_002573470.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228918|emb|CCD75089.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 875
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 245/426 (57%), Gaps = 25/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ + + RD FR ++ G +PRP+ ++E ++ +++ + +P+PIQ
Sbjct: 48 VRDRSRRDVEEFRSKHKVTVLGHNVPRPLFKFSEAGFPSYIMSVIKKSKWDSPTPIQCQG 107
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L RD++GIA+TGSGKTA+F+LP + + P + +GP +++ PTRELAQ
Sbjct: 108 WPVALSGRDLVGIAQTGSGKTASFLLPAIVHAKAQPSL---KRGDGPIVLILVPTRELAQ 164
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
Q+E+ F + G K + GG S Q + Q EVVIATPGRL+D LE R+ + +
Sbjct: 165 QVEKVAEDFCYSAGFKSACLYGGASRTGQAEALGQSPEVVIATPGRLLDFLESRHTNMRR 224
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
C Y+VLDEADRM+DMGFEP + V+ S ++P+ R T M+SAT P
Sbjct: 225 CTYLVLDEADRMLDMGFEPSIRRVV-----SQVRPD------------RQTLMWSATWPR 267
Query: 462 AVERLARKYLRNPVVVTIG-TAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVF 520
V+ LA +L + + + +G T A I QHV ++ ESEKF RL LL+ + +VF
Sbjct: 268 EVKALAEDFLYDYIQINVGSTKLSANHNIRQHVEILNESEKFKRLLSLLNSFDNARVLVF 327
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
TKK D + + L G+ T +HG K Q++R+ +L+ +VLVATDVA RG+DI
Sbjct: 328 TETKKRTDELCQKLQDKGFDATAMHGDKHQKERDRALDSH----ISVLVATDVASRGLDI 383
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
DV ++INYD P E Y HRIGRTGR+ K G A TF + + +L ++L ++ +
Sbjct: 384 NDVRYIINYDYPSQTEDYIHRIGRTGRSDKKGTAYTFFSAKQPRLARELIEVLKEARQTI 443
Query: 641 PPELAK 646
P EL K
Sbjct: 444 PDELFK 449
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 256/428 (59%), Gaps = 25/428 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT + +R + I+ KG P+P+++W + ++ ++L ++++ Y+ P+PIQ
Sbjct: 316 LAKMTTEEVNSYRLELEGITVKGKNCPKPIKSWVQCGISMKILNSLKKHAYEKPTPIQAQ 375
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I P+ E EGP AV+M PTRELA
Sbjct: 376 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPL---EEGEGPIAVIMTPTRELA 432
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 433 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVT 492
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 493 NLRRVTYVVLDEADRMFDMGFEPQVMRIID-----NIRPD------------RQTVMFSA 535
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
T P A+E LAR+ L P+ V +G + QHV++++E +KF +L LL +K A
Sbjct: 536 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLELLGHYQEKGA 595
Query: 518 -IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 596 VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGVCKLLVATSVAAR 655
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + VINY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 656 GLDVKQLILVINYACPNHYEDYVHRAGRTGRAGNKGYAFTFITEDQARYAGDIIKALELS 715
Query: 637 NSPVPPEL 644
+ VP EL
Sbjct: 716 GTAVPAEL 723
>gi|195492387|ref|XP_002093968.1| GE20460 [Drosophila yakuba]
gi|194180069|gb|EDW93680.1| GE20460 [Drosophila yakuba]
Length = 818
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 245/410 (59%), Gaps = 24/410 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I+ KG ++P P + EG ++ + + G+ P+ IQ P+ L RD++G+A+TG
Sbjct: 144 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLVGVAQTG 203
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++ ++F ++
Sbjct: 204 SGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRN 260
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
I GG +Q + +G E+VIATPGRLID LER L +C Y+VLDEADRM+DMGF
Sbjct: 261 TCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGF 320
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ ++ ++P+ R M+SAT P V +LA ++L N + V
Sbjct: 321 EPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQLAEEFLNNYIQVN 363
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNADMVAKNL 534
IG+ A I Q V + E+EK +L +LL ++ + I+FV TKK D + +N+
Sbjct: 364 IGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNI 423
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+ G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+ DV VINYD P N
Sbjct: 424 SRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSN 483
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HRIGRTGR+ TG A T T + + DL Q+L ++N + P+L
Sbjct: 484 SEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKL 533
>gi|402078084|gb|EJT73433.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1218
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/450 (38%), Positives = 258/450 (57%), Gaps = 31/450 (6%)
Query: 206 YDTFDMRVDRH--WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D+ V R W E +L EM+E + R + + I G +P+P++ W+ LT
Sbjct: 540 YSKLDLGVIRKNFWVEPSELSEMSEAEVAELRLELDGIKVSGKDVPKPVQKWSHCGLTRP 599
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
+L ++++ Y P+ IQM A+P+ + RD++G+A+TGSGKT AF+LPM +I P+
Sbjct: 600 ILDVIDKLAYDKPTAIQMQALPVIMSGRDMVGVAKTGSGKTMAFLLPMFRHIKDQKPV-- 657
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+AEGP +++ PTRELA QI + F LG++ V GG I++Q +++G E+V
Sbjct: 658 -KDAEGPIGLILTPTRELAVQIFRDCKPFLKALGLRAVCAYGGPPIKDQIADLKRGAEIV 716
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+AT GR+ID L + R L + Y+VLDEADRM DMGFEPQV +L N +P+
Sbjct: 717 VATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVTKIL-----GNARPDL 771
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
+ T +FSATMP ++ L +K L+NPV + +G I+Q V + +E
Sbjct: 772 Q------------TVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEIREE 819
Query: 499 SEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
KF+RL LL L D A+VFV ++ AD + + L G+ +LHGGK Q R+
Sbjct: 820 KTKFNRLLELLGALYVDDDDVRALVFVERQEKADELLRELLHKGWGCMSLHGGKDQVDRD 879
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ F++ +L+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 880 STISDFKSGVCPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTA 939
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TF+T + + + L QS PVP L
Sbjct: 940 VTFITEEQENCAMGIARALEQSGQPVPERL 969
>gi|240280856|gb|EER44360.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H143]
Length = 1200
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 250/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+TE + R + + I +G +P+P++ W++ L + L + ++ Y+NP+ IQ
Sbjct: 534 LAELTEEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQ 593
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 594 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRPL--EN-MEGPIGLIMTPTRELA 650
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 651 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVT 710
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P+ R T +FSA
Sbjct: 711 NLRRVTYVVLDEADRMFDMGFEPQVMRIL-----GNVRPQ------------RQTVLFSA 753
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G I+Q V + + KF RL LL EL
Sbjct: 754 TFPRNMEALARKTLAKPVEIIVGGKSVVAPEITQIVEVRNQDTKFVRLLALLGELYADDK 813
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 814 NEDARALIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDSTIDDFKAGVFPILIAT 873
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 874 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 933
Query: 632 MLIQSNSPVP 641
L QS PVP
Sbjct: 934 ALKQSGQPVP 943
>gi|115456051|ref|NP_001051626.1| Os03g0805200 [Oryza sativa Japonica Group]
gi|75326432|sp|Q75HJ0.1|RH37_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 37; AltName:
Full=OsPL10a
gi|41469394|gb|AAS07217.1| putative helicase [Oryza sativa Japonica Group]
gi|108711635|gb|ABF99430.1| ATP-dependent RNA helicase An3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550097|dbj|BAF13540.1| Os03g0805200 [Oryza sativa Japonica Group]
gi|222626000|gb|EEE60132.1| hypothetical protein OsJ_13017 [Oryza sativa Japonica Group]
Length = 637
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 255/422 (60%), Gaps = 22/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 158 EDIPVETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMAC 217
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I SR P + P A++++PTREL+ QI EE KFA+
Sbjct: 218 AQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAY 277
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++VV GG I +Q + +G E+++ATPGRL+D LER L Y+ LDEADR
Sbjct: 278 QTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERARVSLQMVKYLALDEADR 337
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++R+A +L
Sbjct: 338 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTMLFSATFPKEIQRMASDFLA 384
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
+ + + +G G +T+LI+Q V + E++K S L LL + K A+ VFV TK+
Sbjct: 385 DYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDLLHAQKANGTHGKQALTLVFVETKR 444
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VAH
Sbjct: 445 GADALENWLYTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAH 504
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
VIN+D+P +I+ Y HRIGRTGRAGK+G+AT F + + L +++ ++N VP L
Sbjct: 505 VINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEANQEVPQWLE 564
Query: 646 KH 647
++
Sbjct: 565 RY 566
>gi|390342961|ref|XP_784902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Strongylocentrotus purpuratus]
Length = 954
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/415 (39%), Positives = 242/415 (58%), Gaps = 24/415 (5%)
Query: 234 REDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
R D + +G P+P+ +W + ++ +L +++ Y+ P+PIQ AIP + RD+I
Sbjct: 474 RSDLEGVKVRGKGCPKPVDSWVQCGVSMRVLTILKKNNYEKPTPIQCQAIPAIMSGRDLI 533
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKT AF+LPM +I P+ E+ GP ++M PTRELA QI +E KF
Sbjct: 534 GIAKTGSGKTMAFLLPMFRHIMDQDPLEAED---GPITLIMTPTRELAMQIFKECKKFTK 590
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDE 409
+G++ V + GG I EQ +++G E+++ TPGR+ID L R L +C Y+VLDE
Sbjct: 591 SMGLRAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRCTYLVLDE 650
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM DMGFEPQV+ +++ N++P+ R T +FSAT P +E LARK
Sbjct: 651 ADRMFDMGFEPQVMKIVE-----NIRPD------------RQTVLFSATFPRQMEALARK 693
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADM 529
L P+ V +G ++QH ++++E +KF +L LL + +VFV +++AD+
Sbjct: 694 ILTKPIEVQVGGRSVVCSDVTQHAMILEEDQKFLKLLELLGYYDEGQILVFVEKQESADL 753
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+ K+L K Y LHGG Q R+ ++ F+ +LVAT VA RG+D+ ++ VINY
Sbjct: 754 LLKDLMKASYPCLALHGGIDQYDRDSIIQDFKAANVKILVATSVAARGLDVKNLVLVINY 813
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
D P + E Y HR+GRTGRAG G + TFL D+ + S + VP EL
Sbjct: 814 DCPNHYEDYVHRVGRTGRAGNKGFSYTFLMPEQAKYAGDVIKAFELSGAKVPEEL 868
>gi|195069886|ref|XP_001997052.1| GH22580 [Drosophila grimshawi]
gi|193891570|gb|EDV90436.1| GH22580 [Drosophila grimshawi]
Length = 793
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/416 (40%), Positives = 246/416 (59%), Gaps = 24/416 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I+ KG ++P P + EG ++ + + G+ P+ IQ +P+ L RD++ +A+TG
Sbjct: 134 ITIKGQEVPTPSIEFEEGGFPDYVMNEIRKQGFTKPTAIQAQGMPIALSGRDLVAVAQTG 193
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI+ +F ++
Sbjct: 194 SGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQAVASEFGSNTQVRN 250
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
I GG +Q + +G E+VIATPGRLID LER L +C Y+VLDEADRM+DMGF
Sbjct: 251 TCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGF 310
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ ++ ++P+ R M+SAT P V +LA ++L N + V
Sbjct: 311 EPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQLAEEFLNNYIQVN 353
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNADMVAKNL 534
IG+ A I Q V + ESEK ++L +LL ++ + I+FV TKK D + +N+
Sbjct: 354 IGSLSLSANHNILQIVDVCDESEKIAKLVQLLTQISGENETKTIIFVETKKRVDEITRNI 413
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+ G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+ DV VINYD P N
Sbjct: 414 SRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSN 473
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEAS 650
E Y HRIGRTGR+ TG A T T + + DL Q+L ++N + P+L AS
Sbjct: 474 SEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLLNMAAS 529
>gi|169781778|ref|XP_001825352.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
oryzae RIB40]
gi|91207409|sp|Q2U2J6.1|PRP5_ASPOR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|83774094|dbj|BAE64219.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1186
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 249/430 (57%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L M+E + R + + I +G ++PRP+ W++ L + L ++R+GY P+ IQ
Sbjct: 524 LAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQ 583
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 584 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL--EN-MEGPVGLIMTPTRELA 640
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 641 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVT 700
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L +N++P+ + T +FSA
Sbjct: 701 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----ANVRPDKQ------------TVLFSA 743
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L PV + +G I+Q V + E +KF RL LL DE
Sbjct: 744 TFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLGNLYSTDE 803
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 804 NEDARALIFVERQEGADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 863
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 864 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAK 923
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 924 ALKQSGQSVP 933
>gi|391865375|gb|EIT74659.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 1186
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 249/430 (57%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L M+E + R + + I +G ++PRP+ W++ L + L ++R+GY P+ IQ
Sbjct: 524 LAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQ 583
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 584 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL--EN-MEGPVGLIMTPTRELA 640
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 641 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVT 700
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L +N++P+ + T +FSA
Sbjct: 701 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----ANVRPDKQ------------TVLFSA 743
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L PV + +G I+Q V + E +KF RL LL DE
Sbjct: 744 TFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLGNLYSTDE 803
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 804 NEDARALIFVERQEGADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 863
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 864 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAK 923
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 924 ALKQSGQSVP 933
>gi|194865632|ref|XP_001971526.1| GG15018 [Drosophila erecta]
gi|190653309|gb|EDV50552.1| GG15018 [Drosophila erecta]
Length = 824
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 245/410 (59%), Gaps = 24/410 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I+ KG ++P P + EG ++ + + G+ P+ IQ P+ L RD++G+A+TG
Sbjct: 145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIALSGRDLVGVAQTG 204
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++ ++F ++
Sbjct: 205 SGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRN 261
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
I GG +Q + +G E+VIATPGRLID LER L +C Y+VLDEADRM+DMGF
Sbjct: 262 TCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGF 321
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ ++ ++P+ R M+SAT P V +LA ++L N + V
Sbjct: 322 EPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQLAEEFLNNYIQVN 364
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNADMVAKNL 534
IG+ A I Q V + E+EK +L +LL ++ + I+FV TKK D + +N+
Sbjct: 365 IGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNI 424
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+ G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+ DV VINYD P N
Sbjct: 425 SRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSN 484
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HRIGRTGR+ TG A T T + + DL Q+L ++N + P+L
Sbjct: 485 SEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKL 534
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 340 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 399
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 400 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 456
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 457 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 516
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 517 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 559
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 560 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 619
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 620 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 679
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 680 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 739
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 740 GTAVPPDLEK 749
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 483 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 542
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 543 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 599
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 600 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 659
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 660 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 702
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 703 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 762
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 763 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 822
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 823 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 882
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 883 GTAVPPDLEK 892
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|340378427|ref|XP_003387729.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Amphimedon queenslandica]
Length = 1111
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 254/429 (59%), Gaps = 25/429 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L MTE + ++R + ++ KG P+P++ W++ L+ +++ +++ GY+ P+PIQ
Sbjct: 406 LSRMTEEEVSMYRIELESLKVKGKDCPKPVKAWSQCGLSSKVMDVIKKNGYEKPTPIQAQ 465
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + +DVIGIA+TGSGKT AF+LP+ ++ P I E+ GP +++ APTRELA
Sbjct: 466 AIPAIMSGKDVIGIAKTGSGKTLAFLLPLFRHVLDQPEIGPED---GPISLIFAPTRELA 522
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E KF L ++ V + GG + EQ +++G E+V+ TPGR+ID L R
Sbjct: 523 IQIYNECRKFCKPLKLRTVCVYGGSGVSEQIADLKRGAEIVVCTPGRMIDVLAANSGRVT 582
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ +++ N +P+ R T MFSA
Sbjct: 583 NLRRLTYLVLDEADRMFDMGFEPQVMKIIN-----NTRPD------------RQTVMFSA 625
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LARK L P+ V +G + + Q VV+++ ++KF +L LL ++ +
Sbjct: 626 TFPRQMEALARKILTQPIEVQVGGRSVVCKDVEQTVVVLESNQKFLKLLELLGVYQEQGS 685
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
+VFV ++ AD + K+L K Y LHGG Q R+ + FR+ +L+AT VA R
Sbjct: 686 VLVFVERQETADGLIKDLMKASYTCMALHGGMDQSDRDSVISDFRSGAMPLLIATSVAAR 745
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NYD P + E Y HR GRTGRAG+ G A TF+T + + ++ + L S
Sbjct: 746 GLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGRKGFAFTFITPDQSRLSGEILKALELS 805
Query: 637 NSPVPPELA 645
+ VP ELA
Sbjct: 806 GAAVPEELA 814
>gi|313238875|emb|CBY13871.1| unnamed protein product [Oikopleura dioica]
Length = 1036
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/430 (39%), Positives = 249/430 (57%), Gaps = 32/430 (7%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
E KL+ TE D + +G P+P++ WA+ + ++L ++R+ ++ P+PIQ
Sbjct: 348 EVKLQRATELD--------GVRIRGKNCPKPIKTWAQSGCSSKVLTLIKRMKFEKPTPIQ 399
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
+P + RDVIGIA+TGSGKT FVLPML ++ E + EGP AV+M PTRE
Sbjct: 400 AQCLPAIMSGRDVIGIAKTGSGKTLGFVLPMLRHMEHQ---REVEKGEGPIAVIMTPTRE 456
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERR 395
LA QI ++T KFA+++ + V + GG I EQ +++G E++I TPGR+ID L R
Sbjct: 457 LAIQITKDTRKFANHMRWRTVCVYGGTGISEQISELKRGAEIIICTPGRMIDMLAANNGR 516
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMF 455
L +C Y VLDEADRM DMGFEPQV+ +L++ ++P+ R +F
Sbjct: 517 VTNLRRCTYCVLDEADRMFDMGFEPQVMHILNS-----VRPD------------RQLVLF 559
Query: 456 SATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK 515
SAT P ++E LAR+ L P+ +T+G + + Q+VV++ + +KF +L LL +
Sbjct: 560 SATFPRSMEALARRILTKPLEITVGGKSVVCDDVQQNVVVLNDEDKFLKLLELLGRFQES 619
Query: 516 -TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ IVF + + AD + K + K GY LHGG Q R+ + F+ N+L+AT VA
Sbjct: 620 GSVIVFTHKHEVADALLKEVLKAGYPAQALHGGMDQYDRDSVINDFKKGVSNLLIATSVA 679
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+D+ ++ V+N+D P + E Y HR GRTGRAG G A TFLT + D+ + L
Sbjct: 680 ARGLDVKNLILVVNFDCPNHYEDYVHRCGRTGRAGNKGTAYTFLTEEEGKYAGDIIKALE 739
Query: 635 QSNSPVPPEL 644
S + VP L
Sbjct: 740 MSKAEVPKHL 749
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 274 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 333
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 334 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 390
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 391 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 450
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 451 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 493
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 494 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 553
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 554 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 613
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 614 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 673
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 674 GTAVPPDLEK 683
>gi|389631667|ref|XP_003713486.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
gi|152032666|sp|A4RN46.1|PRP5_MAGO7 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|351645819|gb|EHA53679.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
Length = 1012
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/437 (39%), Positives = 255/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSEK-KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L EMTE + R + + I G +P+P++ W+ LT +L + ++ Y P
Sbjct: 342 WVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKP 401
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+ IQM A+P+ + RDV+G+A+TGSGKT AF+LPM +I P+ + EGP +++
Sbjct: 402 TAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDN---EGPIGLILT 458
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI + F LG++ V GG I++Q +++G E+V+AT GR+ID L
Sbjct: 459 PTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAA 518
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + Y+VLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 519 NQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIF-----ANVRPD------------RQ 561
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NPV + +G I+Q V + E KF+RL LL E
Sbjct: 562 TVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGE 621
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D +++FV ++ AD + + L + GY +LHGGK Q R+ ++ F++ V
Sbjct: 622 LYKDDDDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPV 681
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
++AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 682 MIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEEQENCAI 741
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP +L
Sbjct: 742 GIAKALEQSGQPVPEKL 758
>gi|414591873|tpg|DAA42444.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 1 [Zea mays]
gi|414591874|tpg|DAA42445.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 2 [Zea mays]
Length = 647
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/425 (39%), Positives = 251/425 (59%), Gaps = 23/425 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 158 EDIPVETSGHDVPAPVNTFAEIDLGDALNDNIRRCKYVKPTPVQRYAIPISIAGRDLMAC 217
Query: 295 AETGSGKTAAFVLPMLTYISRLPPI---SEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF P+++ I + P S P A++++PTREL+ QI EE KFA
Sbjct: 218 AQTGSGKTAAFCFPIISGILKSPKPHQRSRSTRTACPLALILSPTRELSVQIHEEARKFA 277
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ G++VV GG I Q + +G E+++ATPGRL+D LER L Y+ LDEAD
Sbjct: 278 YQTGVRVVVAYGGAPITNQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEAD 337
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM+DMGFEPQ+ +++ M +R R T +FSAT P ++R+A +L
Sbjct: 338 RMLDMGFEPQIRKIVEGMDM-------------PQRGERQTMLFSATFPKEIQRMAADFL 384
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKT------AIVFVNTK 524
+ + + +G G +T+LI Q V + +S+K S L LL + + T +VFV TK
Sbjct: 385 ADYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSYLMDLLHAQKANGTHGKHALTLVFVETK 444
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD + L + G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VA
Sbjct: 445 RGADALEDWLFRNGFPATSIHGDRTQQEREHALRSFKSGATPILVATDVAARGLDIPHVA 504
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HVIN+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L ++ ++N VP L
Sbjct: 505 HVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTTLARPLSDLMKEANQEVPKWL 564
Query: 645 AKHEA 649
+ A
Sbjct: 565 EGYAA 569
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|320166884|gb|EFW43783.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 876
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 261/467 (55%), Gaps = 32/467 (6%)
Query: 180 IRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNI 239
+RKKE P + A++ +E D Y + + + + R +
Sbjct: 229 VRKKEIDPLPPIDHGAIQYREFEKDFYS----------AHSDISGLDPLEVDSLRRKLQL 278
Query: 240 SYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGS 299
GS +P P ++ L+ A+ + GY P+PIQ A+P+GL RD+IGIA+TGS
Sbjct: 279 RVSGSNVPSPCVSFGHFGFDSPLMAAISKHGYTQPTPIQAQAVPVGLSGRDIIGIAKTGS 338
Query: 300 GKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVV 359
GKTAAF+ PML +I E + EGP V++APTREL QQI E KF G++V
Sbjct: 339 GKTAAFLWPMLVHIMDQ---DELDVGEGPIGVIVAPTRELCQQIYNEATKFGRVYGLRVA 395
Query: 360 SIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 419
+I GG+S EQ ++QG E+++ATPGRLI+ L+ + + + ++VLDEAD+M +MGFE
Sbjct: 396 AIYGGESKYEQSKVLQQGVEILVATPGRLIEMLKDKLTNMLRATFLVLDEADKMFNMGFE 455
Query: 420 PQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
PQV +++ ++P+ R T +FSAT +ERLAR L +PV + +
Sbjct: 456 PQVRSIIN-----RIRPD------------RQTLLFSATFKKRIERLARDVLTDPVRIVV 498
Query: 480 GTAGKATELISQ-HVVMMKESEKFSRL-QRLLDELGDKTAIVFVNTKKNADMVAKNLDKL 537
G G+A + ++Q V++ + EKFS L +++ + + +VFV K +V L+K
Sbjct: 499 GDVGEANQDVAQTAVILHSDDEKFSWLTSHIVEFMSTGSVLVFVTKKAGCQLVTDKLNKA 558
Query: 538 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 597
+ + LHG Q R + F+ K + +LVATDVA RG+DI + V+N+D+ +I+
Sbjct: 559 HFEASALHGDVDQNSRNTIIAKFKRKAFPILVATDVAARGLDISHIRTVVNFDVARDIDT 618
Query: 598 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+THRIGRTGRAG+ G A T L+ D DL + +N PV P+L
Sbjct: 619 HTHRIGRTGRAGEKGSAYTLLSSKDASFAGDLVRNFESANQPVSPQL 665
>gi|168067875|ref|XP_001785829.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662518|gb|EDQ49361.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 243/413 (58%), Gaps = 30/413 (7%)
Query: 236 DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIA 295
D I+ P P+ ++ + L +++ V Y P+PIQ A+P+ L RD++G A
Sbjct: 95 DVEITPDTEPAPAPIESFEDMCLHLSIMKDVTFHNYTTPTPIQAQALPVALSGRDLLGCA 154
Query: 296 ETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL- 354
ETGSGKTAAF LPM+ + PPI +GP A+V+APTRELAQQIE+E F+
Sbjct: 155 ETGSGKTAAFSLPMIQHCLAQPPI---RRGDGPLALVLAPTRELAQQIEKEVKAFSRSAE 211
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
G K +VGG +I EQ +R G E+V+ATPGR ID L++ + L++ +YVVLDEADRM+
Sbjct: 212 GFKTSIVVGGTNIYEQRSELRAGVEIVVATPGRFIDHLQQGNSSLSRVSYVVLDEADRML 271
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ V+ ++P + T +FSATMP +E LA++YL P
Sbjct: 272 DMGFEPQIREVMRSLPKKH-----------------QTLLFSATMPEEIEALAQEYLNKP 314
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKF-SRLQRLLDELGDKT--------AIVFVNTKK 525
V V +G T ++Q++ + E EK S L L+DE IVFV K
Sbjct: 315 VRVKVGRVSSPTANVTQNLEKITEKEKIDSLLALLVDEHSQSLDSNQPPPLTIVFVERKA 374
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
D V L + G + T LHGG+SQ +RE +L FR N+LVATDVA RG+D+ VAH
Sbjct: 375 RCDEVTDALVEQGLKATALHGGRSQSEREAALRDFRKGTTNILVATDVASRGLDVTGVAH 434
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
VIN D+P +E Y HRIGRTGRAG +G AT+F T D + +++ + ++ S
Sbjct: 435 VINLDLPKTMEDYVHRIGRTGRAGASGRATSFYTERDVFLVAQIRRAITEAES 487
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|322796814|gb|EFZ19232.1| hypothetical protein SINV_01003 [Solenopsis invicta]
Length = 1201
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 265/471 (56%), Gaps = 25/471 (5%)
Query: 198 LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
L++ DL +R D + + + + FRE+ I+ KG +P P++ + EG
Sbjct: 59 LRKVNWDLCTLEPLRKDFYIEHPAVRNRSNEEMNRFRENTEITVKGEHVPNPIQYFEEGN 118
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
P ++ + R GY P+PIQ P+ L RD++ IA+TGSGKT ++LP + +I P
Sbjct: 119 FPPYVMENIHREGYLRPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQP 178
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
IS +GP +++APTRELAQQI+E F ++ I GG Q + +G
Sbjct: 179 RISS---GDGPIVLILAPTRELAQQIQEVANSFGEMAAVRNTCIFGGAPKGPQAHDLEKG 235
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
E+ IATPGRLID LE+ L +C Y+VLDEADRM+DMGFEPQ+ +++ ++P+
Sbjct: 236 IEICIATPGRLIDFLEKGTTNLYRCTYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD 290
Query: 438 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMM 496
R M+SAT P V LA +L + + + IG+ A I+Q + +
Sbjct: 291 ------------RQVLMWSATWPKEVRALAEDFLTDYIHLNIGSLTLSANHNITQIIDVC 338
Query: 497 KESEKFSRLQRLLDELG---DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQR 553
+E EK +L RLL E+G + I+FV TK+ D + KN+ + G++ ++HG K+Q++R
Sbjct: 339 QEYEKDLKLYRLLQEIGTEKENKTIIFVETKRKVDDITKNIRREGWQAVSIHGDKNQQER 398
Query: 554 EISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGV 613
+ L+ FR + +LVATDVA RG+D+ DV +VIN+D P + E Y HRIGRTGR +TG
Sbjct: 399 DHVLQEFRNGKAPILVATDVAARGLDVDDVKYVINFDFPSSSEDYIHRIGRTGRKRQTGT 458
Query: 614 ATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRR 664
A F T H+ DL ++L ++ V P L++ A K G R +R
Sbjct: 459 AYAFFTTHNMKHAGDLIEVLREAGQNVNPRLSEM-AEMAKAGNFGGRNGKR 508
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/416 (39%), Positives = 245/416 (58%), Gaps = 24/416 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R + I+ KG+ +P P + EG +L + R G+ P+ IQ P+ L RD++
Sbjct: 687 YRSNKEITVKGANVPGPNIYFEEGGFPDYVLNEIRRQGFGEPTAIQAQGWPIALSGRDMV 746
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKT A++LP + +I+ P +S +GP A+++APTRELAQQI++ F
Sbjct: 747 GIAQTGSGKTLAYILPAIVHINHQPRLSRN---DGPIALILAPTRELAQQIQQVASDFGM 803
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 804 SSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 863
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R T M+SAT P V LA ++L
Sbjct: 864 MLDMGFEPQIRKIVE-----QIRPD------------RQTLMWSATWPKEVRNLAEEFLT 906
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDK---TAIVFVNTKKNAD 528
+ + + IG+ A I Q V + +E EK S+L +LL+E+ ++ I+FV TK+ D
Sbjct: 907 DYIQINIGSLQLAANHNILQIVDVCEEYEKESKLMKLLEEISNEPENKTIIFVETKRKVD 966
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ + +++ G++ +HG KSQ++R+ L FR R +LVATDVA RG+D+ DV VIN
Sbjct: 967 DITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVAARGLDVEDVKFVIN 1026
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
D P N E Y HRIGRTGR+ +TG A F T + DL Q+L ++ V P+L
Sbjct: 1027 LDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAGDLIQVLEEAKQVVNPKL 1082
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|124088187|ref|XP_001346998.1| RNA helicase [Paramecium tetraurelia strain d4-2]
gi|145474579|ref|XP_001423312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057387|emb|CAH03371.1| RNA helicase, putative [Paramecium tetraurelia]
gi|124390372|emb|CAK55914.1| unnamed protein product [Paramecium tetraurelia]
Length = 1157
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 251/446 (56%), Gaps = 26/446 (5%)
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRA-VER 268
R D + +L +MT + + R+ +I +G +P+P++NW + L +L +E+
Sbjct: 462 FRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLNVLIEK 521
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+ NP PIQ A+P + RD IGIAETGSGKT A++LP+L ++ P + + +GP
Sbjct: 522 KKFINPFPIQAQAVPCIMSGRDFIGIAETGSGKTLAYLLPLLRHVLDQPALKD---GDGP 578
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
A++MAPTRELA QI F L + VV VGG I Q +++G E+V+ TPGR+
Sbjct: 579 IAIIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTPGRM 638
Query: 389 IDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
ID L + L + YVV+DEADRM D+GFEPQ+ ++ N++P+
Sbjct: 639 IDVLTTSNGKITNLRRVTYVVIDEADRMFDLGFEPQICKII-----QNIRPD-------- 685
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R MFSAT P VE+LA++ LR P+ +G G+A I Q + M ES+K +L
Sbjct: 686 ----RQLVMFSATFPKNVEQLAKRVLRKPIECIVGGRGQAGGNIEQIIEFMDESDKLYKL 741
Query: 506 QRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L E K +I +FV + AD + K L K GY+ LHGG + RE ++ F+
Sbjct: 742 LLLFQEWYTKGSILIFVEKQTEADDLFKELLKYGYKSFVLHGGMDPQDREFTIHDFKKGI 801
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
++VAT V RG+DI + VIN+ P ++E Y HRIGRTGRAG+ G A TF T D
Sbjct: 802 RTIMVATSVLARGLDIKHICLVINFSCPNHMEDYIHRIGRTGRAGQKGTAITFFTPQDEH 861
Query: 625 VFYDLKQMLIQSNSPVPPELAKHEAS 650
+ DL +L +S +P +L +++ S
Sbjct: 862 LANDLVYLLEKSEQQLPEKLKEYQKS 887
>gi|406862855|gb|EKD15904.1| dead box ATP-dependent rna helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1208
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 254/431 (58%), Gaps = 28/431 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MTE + R + + I G +P+P++ W++ L + L + ++GY+ P+ IQM
Sbjct: 546 LADMTEAELADLRLELDGIKVAGKDVPKPVQKWSQCGLNVQSLEVIRKLGYERPTAIQMQ 605
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ ++GP +++ PTRELA
Sbjct: 606 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL---EGSDGPVGLIVTPTRELA 662
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F +G++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 663 TQIHKECKPFLKAMGLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANSGRVT 722
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ + +N++P+ R T +FSA
Sbjct: 723 NLRRVTYVVLDEADRMFDMGFEPQVMKIF-----ANIRPD------------RQTILFSA 765
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----G 513
TMP ++ LA+K L++PV +T+G I+Q V + +E +KF RL LL EL
Sbjct: 766 TMPRIMDALAKKTLQSPVEITVGGRSVVAPEITQLVEVREEKQKFHRLLELLGELYNNDE 825
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
D ++FV+ ++ AD + K+L + GY ++HGGK Q R+ +++ F+ +++AT V
Sbjct: 826 DARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGVVPIMIATSV 885
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ + V+N+D P ++E Y HR GRTGRAG G A TF+T + + L
Sbjct: 886 AARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGAKGTAVTFITEDQEQYSVGIAKAL 945
Query: 634 IQSNSPVPPEL 644
QS PVP L
Sbjct: 946 EQSGQPVPERL 956
>gi|380027508|ref|XP_003697465.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 607
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 256/436 (58%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG IP P++ + EG P +L + + GY P+ IQ P+ L RD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLEEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +VLP + +I P +S +GP A+++APTRELAQQI+E F
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQPRLSN---GDGPIALILAPTRELAQQIQEVANCFGE 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 212 AAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 272 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLS 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNAD 528
+ + + IG+ A I Q V + +E EK +L RLL E+G++ I+FV TK+ D
Sbjct: 315 DYMHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKENKTIIFVETKRKVD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ F++ R +LVATDVA RG+D+ DV +VIN
Sbjct: 375 DITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVAARGLDVDDVKYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ + P L +
Sbjct: 435 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVLREAGQNINPRLTEM- 493
Query: 649 ASKFKPGTIPDRPPRR 664
A K GT +R +R
Sbjct: 494 AELAKSGTYGNRSGKR 509
>gi|307191879|gb|EFN75298.1| Probable ATP-dependent RNA helicase DDX5 [Harpegnathos saltator]
Length = 627
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 255/436 (58%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG +P P++ + EG P ++ + R GY P+PIQ P+ L RD++
Sbjct: 107 FRENTEITVKGENVPNPIQYFEEGNFPPYVMEGIRRQGYSQPTPIQAQGWPIALSGRDLV 166
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP + +I P +S +GP A+++APTRELAQQI+E F
Sbjct: 167 AIAQTGSGKTLGYILPAIVHIIHQPRLSN---GDGPIALILAPTRELAQQIQEVANCFGE 223
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ I GG Q + +G E+ IATPGRLID LE+ L +C Y+VLDEADR
Sbjct: 224 SAAVRNTCIFGGAPKGPQAHDLDRGVEICIATPGRLIDFLEKGTTNLRRCTYLVLDEADR 283
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 284 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLT 326
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGD---KTAIVFVNTKKNAD 528
+ + IG+ A I+Q + + +E EK S+L RLL E+G+ I+FV TK+ D
Sbjct: 327 DYTHLNIGSLTLSANHNITQIIDVCQEFEKDSKLFRLLQEIGNEKENKTIIFVETKRKVD 386
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ FR+ R +LVATDVA RG+D+ DV +VIN
Sbjct: 387 DITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDVAARGLDVDDVKYVIN 446
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ V P L++
Sbjct: 447 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVLREAGQNVNPRLSEM- 505
Query: 649 ASKFKPGTIPDRPPRR 664
A K G R +R
Sbjct: 506 AEMAKAGNFGGRNGKR 521
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 389 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 448
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 449 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 505
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 506 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 565
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 566 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 608
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 609 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 668
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 669 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 728
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 729 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 788
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 789 GTAVPPDLEK 798
>gi|356566895|ref|XP_003551661.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
max]
Length = 591
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 255/430 (59%), Gaps = 30/430 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P + +AE L L + + R Y P+P+Q AIP+ L RD++
Sbjct: 113 EDIPVETSGENVPPAVNTFAEIDLGNALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMAC 172
Query: 295 AETGSGKTAAFVLPMLTYI--------SRLPPISEENEAEGPYAVVMAPTRELAQQIEEE 346
A+TGSGKTAAF P+++ I R PP P A+V++PTREL+ QI EE
Sbjct: 173 AQTGSGKTAAFCFPIISGIMRGQAQVLQRPPPRGVRTVY--PLALVLSPTRELSMQIHEE 230
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+
Sbjct: 231 ARKFSYQTGVRVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLA 290
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RL
Sbjct: 291 LDEADRMLDMGFEPQIRKIVEQM---DMPPAAA----------RQTMLFSATFPKEIQRL 337
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--V 519
A +L N + + +G G +T+LI Q V ++ES+K S L LL + + K A+ V
Sbjct: 338 ASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQKANGVQGKQALTLV 397
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV TKK AD + L + + TT+HG ++Q++RE++L F++ +LVATDVA RG+D
Sbjct: 398 FVETKKGADALEHWLCRNNFPATTIHGDRTQQERELALRSFKSGNTPILVATDVAARGLD 457
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
IP VAHV+N+D+P +I+ Y HRIGRTGRAGK G+AT F ++ + L ++ ++N
Sbjct: 458 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASLARALADLMQEANQE 517
Query: 640 VPPELAKHEA 649
VP L++ A
Sbjct: 518 VPDWLSRFAA 527
>gi|219119587|ref|XP_002180550.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408023|gb|EEC47958.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 552
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 246/411 (59%), Gaps = 20/411 (4%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I G +P P+ ++ + +L R + GY P+P+Q ++P+ Q RD++ A+TG
Sbjct: 110 IEVSGDDVPDPIETYSPETIGDDLFRNTQLCGYSRPTPVQKYSVPICTQGRDLMACAQTG 169
Query: 299 SGKTAAFVLPM-LTYISRLPPISEENEAE--GPYAVVMAPTRELAQQIEEETVKFAHYLG 355
SGKTA F+ P+ ++ I R EN P A+V+APTRELAQQI EE +F + G
Sbjct: 170 SGKTAGFLFPIIMSMIKRGGSDPPENARRRIYPEALVLAPTRELAQQIHEEAKRFTYATG 229
Query: 356 IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMID 415
I V I GG ++ +Q + +GC++++ATPGRL+D +ER + +++VLDEADRM+D
Sbjct: 230 IASVVIYGGANVGDQLREMERGCDLLVATPGRLVDLIERGRLGMESVSFLVLDEADRMLD 289
Query: 416 MGFEPQVVGVLD--AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
MGFEPQ+ +++ MP I R T MFSAT P ++RLA ++R+
Sbjct: 290 MGFEPQIRRIVEESGMPGG---------------IDRQTMMFSATFPANIQRLASDFMRD 334
Query: 474 PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKN 533
V +T+G G A++ ++Q V ++E +K L + L + D ++FV TK++ D V
Sbjct: 335 YVFLTVGRVGSASKDVTQTVEFVEERDKVDALMKFLLTIQDGLILIFVETKRSCDYVEDV 394
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L G+ ++HG KSQ +RE +L F+ +L AT VA RG+DIP+V V+NYD+P
Sbjct: 395 LCGQGFPACSIHGDKSQREREDALRYFKNGNTPILCATSVAARGLDIPNVTQVVNYDLPS 454
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
NI+ Y HRIGRTGRAG TG A +F+ ++ V +L+ +L ++ VPP L
Sbjct: 455 NIDDYVHRIGRTGRAGNTGAALSFINESNSGVVRELRDLLDENEQDVPPWL 505
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|238498592|ref|XP_002380531.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
gi|220693805|gb|EED50150.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
Length = 1201
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 249/430 (57%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L M+E + R + + I +G ++PRP+ W++ L + L ++R+GY P+ IQ
Sbjct: 539 LAAMSEEEAASLRLELDGIKVRGVEVPRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQ 598
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 599 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL--EN-MEGPVGLIMTPTRELA 655
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 656 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVT 715
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L +N++P+ + T +FSA
Sbjct: 716 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----ANVRPDKQ------------TVLFSA 758
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L PV + +G I+Q V + E +KF RL LL DE
Sbjct: 759 TFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLGNLYSTDE 818
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 819 NEDARALIFVERQEGADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 878
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 879 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAK 938
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 939 ALKQSGQSVP 948
>gi|240994916|ref|XP_002404560.1| DEAD box protein abstrakt, putative [Ixodes scapularis]
gi|215491582|gb|EEC01223.1| DEAD box protein abstrakt, putative [Ixodes scapularis]
Length = 568
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 268/495 (54%), Gaps = 41/495 (8%)
Query: 165 QKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHW-SEKKLE 223
+KK A+ E + ++++++E + E E AL E A +D + W L
Sbjct: 41 KKKAEARKESALEKQLKEEEKILESVAERRALMGVAELAKGIQ-YDQPIQTGWRPPAYLT 99
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
M + R+ F+I +G IP P+ + E K +L ++ R G P+PIQM +P
Sbjct: 100 SMLPKQQEDIRKKFHILVEGEGIPSPITTFKEMKFPRTILASLRRKGITQPTPIQMQGLP 159
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTREL 339
L RD+IGIA TGSGKT FVLP+L + RLP + + EGPY +V+ P+REL
Sbjct: 160 AVLSGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRLPFV----QNEGPYGLVVCPSREL 215
Query: 340 AQQIEEETVKF------AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
A+Q E F A Y ++ +GG S+ EQ +R+G V++ATPGRL+D L+
Sbjct: 216 AKQTFEIVSFFVRALEEAGYPSLRGCLCIGGTSVREQLEIVRRGVHVMVATPGRLMDMLD 275
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
++ L+ C Y+ LDEADRMIDMGFE V + R T
Sbjct: 276 KKMVNLDMCRYLCLDEADRMIDMGFEEDVRTIFSFFKGQ-----------------RQTL 318
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG 513
+FSATMP ++ AR L P+ V +G AG A+ + Q V +K+ K L L
Sbjct: 319 LFSATMPKKIQNFARSALVKPITVNVGRAGAASLDVVQEVEYVKQEAKIVHLLETLQ--- 375
Query: 514 DKTA---IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVA 570
KTA ++F K++ D + + L G +HGGK QE+R +++ FR +VLVA
Sbjct: 376 -KTAPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERSRAVDAFRRAEKDVLVA 434
Query: 571 TDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDL 629
TDVA +G+D ++ HVINYDMP +IE Y HRIGRTGR+G+ G+ATTF+ D V D+
Sbjct: 435 TDVASKGLDFENIQHVINYDMPEDIENYVHRIGRTGRSGRMGIATTFINKACDESVLLDM 494
Query: 630 KQMLIQSNSPVPPEL 644
K +L+++ VPP L
Sbjct: 495 KHLLLEAKQKVPPFL 509
>gi|310790963|gb|EFQ26496.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 1112
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 260/470 (55%), Gaps = 35/470 (7%)
Query: 190 PEEAAALKLKEEAADLYDTFDMRVDRH------WSE-KKLEEMTERDWRIFREDFN-ISY 241
P A+ K + D+ ++D H W E +L +TE + R + + I
Sbjct: 420 PNAVLAMAAKRKKKDIPTVDYSKLDLHPIRKNFWVEPAELAALTEEEANELRLELDGIKV 479
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
G IP+P++ WA+ LT L + +G+ P+ IQM A+P+ + RDV+G+A+TGSGK
Sbjct: 480 SGKNIPKPVQKWAQCGLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVGVAKTGSGK 539
Query: 302 TAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
T AF+LPM +I PP+ + +GP ++M PTRELA QI + F +G++ V
Sbjct: 540 TLAFLLPMFRHIMDQPPL---KDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCA 596
Query: 362 VGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGF 418
GG I EQ +++G E+V+ TPGR+ID L + R L + Y VLDEADRM DMGF
Sbjct: 597 YGGAPIREQIAELKRGAEIVVCTPGRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGF 656
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQV+ + +N++P+ R T +FSATMP ++ L +K L++PV +T
Sbjct: 657 EPQVMKIF-----ANIRPD------------RQTILFSATMPRIIDSLTKKVLKSPVEIT 699
Query: 479 IGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNL 534
+G I+Q V ++ E +KF L LL EL DK ++VFV ++ AD + K L
Sbjct: 700 VGGRSVVASDITQIVEIVPEDQKFYHLLGLLGELYDKDEDARSLVFVERQEKADDLLKEL 759
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
GY ++HGGK Q R+ ++ F+ +L+AT VA RG+D+ + V+NYD P +
Sbjct: 760 MTKGYPCMSIHGGKDQVDRDSTISDFKKGIVPILIATSVAARGLDVKQLKLVVNYDCPSH 819
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HR GRTGRAG G A T++T + + L QS PVP L
Sbjct: 820 SEDYVHRCGRTGRAGNKGTAVTYITEEQESCASAVAKALEQSGQPVPERL 869
>gi|91206539|sp|Q59LU0.2|DBP2_CANAL RecName: Full=ATP-dependent RNA helicase DBP2
Length = 562
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 252/431 (58%), Gaps = 32/431 (7%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
++RD FR++ ++ KG IP P+ + E +L+ V+ G+ P+PIQ P+
Sbjct: 102 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 161
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD+IGIA TGSGKT ++ LP + +I+ P + +GP +V+APTRELA QI+
Sbjct: 162 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQL---QYGDGPIVLVLAPTRELAVQIQT 218
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KF I+ + GG Q + +G E+ IATPGRLID LE L + Y+
Sbjct: 219 ECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYL 278
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++D ++P+ R T M+SAT P V++
Sbjct: 279 VLDEADRMLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQQ 321
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFSRLQRLLDEL------GDKTA 517
L R YL +P+ VTIG+ EL + H + +++ ++FS+ RL+ L D
Sbjct: 322 LTRDYLNDPIQVTIGS----LELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKI 377
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VF +TK+ D + L G+ +HG K Q +R+ L+ FR + +++VATDVA RG
Sbjct: 378 LVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARG 437
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
ID+ + HVINYDMPGNIE Y HRIGRTGR G +G A +F T ++ + DL +++ ++N
Sbjct: 438 IDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREAN 497
Query: 638 SPVPPELAKHE 648
VPPEL + +
Sbjct: 498 QTVPPELQRFD 508
>gi|221113161|ref|XP_002160326.1| PREDICTED: ATP-dependent RNA helicase abstrakt [Hydra
magnipapillata]
Length = 605
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 249/426 (58%), Gaps = 31/426 (7%)
Query: 234 REDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIG 293
R+ + I +G +P P++ + + K +L+ ++R K+P+PIQM +P L RD+IG
Sbjct: 148 RKRYCILVEGHNVPPPLKRFKDMKFPRSILQCLKRKDIKSPTPIQMQGLPTVLSGRDMIG 207
Query: 294 IAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
IA TGSGKT F LP++ + + + EGPY +++AP+RELA+Q + ++F+
Sbjct: 208 IAFTGSGKTLVFTLPIVMFCVEQEKVLPFRKGEGPYGLLIAPSRELAKQTYDIILEFSES 267
Query: 354 L------GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
L +K++ +GG S+++Q I+ G +V+ATPGRL+D L ++ L+ C ++ L
Sbjct: 268 LRMDGAPTLKILLCIGGTSVKDQAENIKHGVHIVVATPGRLMDLLNKKLITLDVCRFLCL 327
Query: 408 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
DEADRMIDMGFE V + R T +FSATMP ++ A
Sbjct: 328 DEADRMIDMGFEDDVRTIFSYFKGQ-----------------RQTLLFSATMPKKIQNFA 370
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA---IVFVNTK 524
R L PV V +G AG A+ I Q V +K+ EK L + L KTA ++F K
Sbjct: 371 RSALVQPVTVNVGRAGAASLDIIQEVEYVKQEEKILFLLKCLQ----KTAPPVLIFAEKK 426
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ D + + L G +HG K+QE+R S+ FR ++ +VLVATDVA +G+D P++
Sbjct: 427 SDVDDIHEYLLLKGVEAVAIHGDKAQEERHRSVTQFRERKKDVLVATDVASKGLDFPNIQ 486
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH-DTDVFYDLKQMLIQSNSPVPPE 643
HVINYDMP +IE Y HRIGRTGR+GKTG ATTF+ + + V DLK +LI++ VP
Sbjct: 487 HVINYDMPDDIENYVHRIGRTGRSGKTGYATTFINKNCEESVLMDLKHLLIEAKQKVPLC 546
Query: 644 LAKHEA 649
LA+ E+
Sbjct: 547 LAEMES 552
>gi|195126028|ref|XP_002007476.1| GI12369 [Drosophila mojavensis]
gi|193919085|gb|EDW17952.1| GI12369 [Drosophila mojavensis]
Length = 794
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 249/423 (58%), Gaps = 24/423 (5%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
T+ + F I+ KG+++P P + EG ++ + + G+ P+ IQ +P+
Sbjct: 118 TQGETETFLSSNEITIKGNEVPTPSIEFEEGGFPDYVMNEIRKQGFTKPTAIQAQGMPIA 177
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD++ +A+TGSGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++
Sbjct: 178 LSGRDLVAVAQTGSGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQ 234
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
+F ++ I GG +Q + +G E+VIATPGRLID LER L +C Y+
Sbjct: 235 VASEFGSNTQVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYL 294
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ ++P+ R M+SAT P V +
Sbjct: 295 VLDEADRMLDMGFEPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQ 337
Query: 466 LARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFV 521
LA ++L N + V IG+ A I Q V + ESEK +L +LL ++ + I+FV
Sbjct: 338 LAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIVKLIQLLTQISGENETKTIIFV 397
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK D + +N+ + G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+
Sbjct: 398 ETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVD 457
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
DV VINYD P N E Y HRIGRTGR+ TG A T T + + DL Q+L ++N +
Sbjct: 458 DVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTIN 517
Query: 642 PEL 644
P+L
Sbjct: 518 PKL 520
>gi|168043479|ref|XP_001774212.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674480|gb|EDQ60988.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 584
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/422 (41%), Positives = 250/422 (59%), Gaps = 25/422 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G+ +P P+ +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 120 EDIPVETSGNNVPPPVNTFAEIDLGAALNENIRRCKYTKPTPVQRHAIPISLNGRDLMAC 179
Query: 295 AETGSGKTAAFVLPMLTYISR-LPPISEENEAEG-PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P++ I R PP + P A++++PTREL QI +E KFA+
Sbjct: 180 AQTGSGKTAAFCFPIIAGIMRNTPPGRPRGGRKALPLALILSPTRELTSQISDEAKKFAY 239
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
GI+VV GG + Q + +G ++++ATPGRL D LER L+ Y+ LDEADR
Sbjct: 240 QTGIRVVVCYGGAPVHNQLRELERGVDILVATPGRLSDLLERARVSLSMVRYLTLDEADR 299
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++RLA +L
Sbjct: 300 MLDMGFEPQIRRIVEQM---DMPPAGE----------RQTMLFSATFPREIQRLASDFLS 346
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRL------QRLLDELGDKT-AIVFVNTKK 525
N + + +G G +TELI Q V +++++K S L Q L G + +VFV TKK
Sbjct: 347 NYIFLAVGRVGSSTELIVQRVEYVQDADKRSMLMDLIHAQSALAPPGQTSLTLVFVETKK 406
Query: 526 NADMVAKNLDKLGYRVTTLHGGK---SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
AD + L ++G+ TT+HG + ++RE +L FRT +LVATDVA RG+DIP
Sbjct: 407 GADALEDWLCRMGFPATTIHGDRKVFPTQEREHALRSFRTGVTPILVATDVAARGLDIPH 466
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
VAHV+N+D+P +I+ Y HRIGRTGRAGK+GVAT F D + L +++ +S+ VP
Sbjct: 467 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGVATAFFNEKDQSLARSLTELMTESSQEVPG 526
Query: 643 EL 644
L
Sbjct: 527 WL 528
>gi|258570243|ref|XP_002543925.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
gi|237904195|gb|EEP78596.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
Length = 1206
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 175/435 (40%), Positives = 250/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+ E + R +++ I +G +P+P++ W++ L L + ++GY P+ IQ
Sbjct: 540 LAELNEEEVAALRLEWDGIKVRGVDVPKPVQKWSQCGLGVLTLDVIHKLGYDQPTSIQAQ 599
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP +VM PTRELA
Sbjct: 600 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL--EN-MEGPVGLVMTPTRELA 656
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 657 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVT 716
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ N++P R + +FSA
Sbjct: 717 NLRRVTYVVLDEADRMFDMGFEPQVMKII-----GNIRPS------------RQSVLFSA 759
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G I+Q V + E+ KF RL LL L
Sbjct: 760 TFPRNMEALARKTLTKPVEIIVGGRSVVAPEITQIVEVRPENTKFVRLLELLGNLYSDDA 819
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + VL+AT
Sbjct: 820 NEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIAT 879
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 880 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 939
Query: 632 MLIQSNSPVPPELAK 646
L QS PVP + K
Sbjct: 940 ALKQSGQPVPDAVQK 954
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTVVPPDLEK 751
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 193 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 252
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 253 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 309
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 310 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 369
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 370 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 412
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 413 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 472
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 473 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 532
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 533 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 592
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 593 GTAVPPDLEK 602
>gi|414591877|tpg|DAA42448.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 643
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 251/425 (59%), Gaps = 23/425 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 159 EDIPVETSGHDVPAPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMAC 218
Query: 295 AETGSGKTAAFVLPMLTYISRLPPI---SEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF P+++ I + P S P A++++PTREL+ QI EE KFA
Sbjct: 219 AQTGSGKTAAFCFPIISGILKSPKPHQRSRSTRTACPLALILSPTRELSVQIHEEARKFA 278
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ G++VV GG I Q + +G E+++ATPGRL+D LER L Y+ LDEAD
Sbjct: 279 YQTGVRVVVAYGGAPITNQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEAD 338
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM+DMGFEPQ+ +++ M +R R T +FSAT P ++R+A +L
Sbjct: 339 RMLDMGFEPQIRKIVEGMDM-------------PQRGERQTMLFSATFPKEIQRMAADFL 385
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKT------AIVFVNTK 524
+ + + +G G +T+LI Q V + +S+K S L L+ + + T +VFV TK
Sbjct: 386 ADYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSYLMDLIHAQKANGTHGKHALTLVFVETK 445
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD + L + G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VA
Sbjct: 446 RGADALEDWLFRNGFPATSIHGDRTQQEREHALRSFKSGATPILVATDVAARGLDIPHVA 505
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HVIN+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L ++ ++N VP L
Sbjct: 506 HVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTTLARPLSDLMKEANQEVPKWL 565
Query: 645 AKHEA 649
+ A
Sbjct: 566 DGYAA 570
>gi|242093508|ref|XP_002437244.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
gi|241915467|gb|EER88611.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
Length = 567
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/448 (38%), Positives = 259/448 (57%), Gaps = 36/448 (8%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
LE + + R+ + D + G P P + L +LR V R GY NP+P+Q A
Sbjct: 27 LEIGGDGERRLDKYDIPVEVSGEGAPAPADGFEAAGLAEAVLRNVARCGYDNPTPVQRYA 86
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE-------------NEAEGP 328
+P+ + RD++ A+TGSGKTAAF LP+++ + +PP + P
Sbjct: 87 MPIVMAGRDLMACAQTGSGKTAAFCLPVVSGLV-VPPAGGGSGYGYGRRDRGSFDRVAKP 145
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
A+V+APTRELA QI EE KF+ G++VV GG + Q + +G ++++ATPGRL
Sbjct: 146 RALVLAPTRELAAQINEEARKFSFQTGLRVVVAYGGTPMYNQLRDLERGVDLLVATPGRL 205
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI 448
+D +ER L Y+V+DEADRM+DMGFEPQ+ ++D M N+ K+
Sbjct: 206 VDMVERSRISLEGIKYLVMDEADRMLDMGFEPQIRKIVDMM---NMP----------KKS 252
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRL 508
R T +FSAT PP ++RLA +L N + VT+G G +T+LI Q + + + EK L L
Sbjct: 253 VRQTMLFSATFPPEIQRLASDFLYNYIFVTVGRVGSSTDLIEQKLEFVNDGEKRGFLIDL 312
Query: 509 L---------DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEG 559
L +L +VFV TK+ AD + L G+ T +HG ++Q++RE +L+
Sbjct: 313 LQKQSAGVANSKLQQPLTLVFVETKREADSLRYFLQSKGFPATAIHGDRTQQERESALKS 372
Query: 560 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
F++ ++VATDVA RG+D+P+VAHVINYD+P +IE Y HRIGRTGRAGK G+AT F T
Sbjct: 373 FKSGTTPIMVATDVASRGLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGIATAFFT 432
Query: 620 FHDTDVFYDLKQMLIQSNSPVPPELAKH 647
+ + L +++ ++ VP L ++
Sbjct: 433 ESNHPLAKGLLELMTEAKRDVPEWLVEY 460
>gi|302789414|ref|XP_002976475.1| hypothetical protein SELMODRAFT_105510 [Selaginella moellendorffii]
gi|300155513|gb|EFJ22144.1| hypothetical protein SELMODRAFT_105510 [Selaginella moellendorffii]
Length = 613
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/426 (40%), Positives = 255/426 (59%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G IP + ++A+ L P L + R + P+P+Q AIP+ L RD++
Sbjct: 137 DDIPVEASGENIPPAITSFADVDLGPVLNENIRRCKFVKPTPVQKHAIPISLHGRDLMAC 196
Query: 295 AETGSGKTAAFVLPMLTYI-SRLPPISEENEAE---GPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P++ I PP S P A++++PTREL+ QI +E KF
Sbjct: 197 AQTGSGKTAAFCFPIIAGILWNFPPGSRHARGSRKAFPLALILSPTRELSSQIHDEAKKF 256
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
A+ G+KVV I GG S++ Q + +G ++++ATPGRL D ++R L+ Y+ LDEA
Sbjct: 257 AYQTGVKVVVIYGGTSVQSQLKELERGVDILVATPGRLDDLMQRGRISLSLVRYLALDEA 316
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQ+ +++ ++++ P + R T +FSAT P ++RLA +
Sbjct: 317 DRMLDMGFEPQIRKIVE---NTDMPPPGQ----------RQTMLFSATFPREIQRLAADF 363
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNT 523
L N + + +G G +T+LI Q V + + +K S L ++ + L + + VFV T
Sbjct: 364 LYNYIFLAVGRVGSSTDLIVQRVEYVHDVDKRSMLMDMIHAQKPNGLNGQLPLILVFVET 423
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L ++G TT+HG ++Q +RE +L FRT +LVATDVA RG+DIP V
Sbjct: 424 KRGADSLEDWLIQMGISATTIHGDRTQVEREHALRSFRTGVTPILVATDVAARGLDIPHV 483
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHVINYD+P +I+ Y HRIGRTGRAGK+G AT F T DT + L ++ ++N VP
Sbjct: 484 AHVINYDLPSDIDDYVHRIGRTGRAGKSGFATAFFTDKDTSLARPLVDLMQEANQQVPEW 543
Query: 644 LAKHEA 649
LA A
Sbjct: 544 LASCAA 549
>gi|242059637|ref|XP_002458964.1| hypothetical protein SORBIDRAFT_03g043450 [Sorghum bicolor]
gi|241930939|gb|EES04084.1| hypothetical protein SORBIDRAFT_03g043450 [Sorghum bicolor]
Length = 578
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/426 (39%), Positives = 257/426 (60%), Gaps = 22/426 (5%)
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
++ M+E D +R +I+ +G +P+P+R + E ++A+ + G+ P+PIQ
Sbjct: 129 SVQAMSEADVAQYRRLRDITVEGRDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQ 188
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
P+ L+ RD+IGIA+TGSGKT +++LP L ++ P + + +GP +++APTRELA
Sbjct: 189 GWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVGAQPRL---EQGDGPIVLILAPTRELA 245
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI+EE+ KF Y + + GG Q +R+G E+VIATPGRLID LE + L
Sbjct: 246 VQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 305
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ Y+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T +SAT P
Sbjct: 306 RVTYLVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLYWSATWP 348
Query: 461 PAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI- 518
VE LAR++L+NP VTIG+ KA I Q V ++ + EK+ RL +LL +L D + I
Sbjct: 349 REVEALARQFLQNPYKVTIGSPELKANHSIQQIVEVISDHEKYPRLSKLLSDLMDGSRIL 408
Query: 519 VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGI 578
+F TKK+ D + + L G+ ++HG K+Q +R+ L F++ + ++ ATDVA RG+
Sbjct: 409 IFFQTKKDCDKITRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 468
Query: 579 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
D+ D+ VINYD P +E Y HRIGRTGRAG +G A TF T + +L ++L ++
Sbjct: 469 DVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTHANAKFSRNLVKILREAGQ 528
Query: 639 PVPPEL 644
V P L
Sbjct: 529 AVNPAL 534
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 249/431 (57%), Gaps = 28/431 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ EMT+ + + R + + I +G PRP+ W+ L L ++++GY P+PIQ
Sbjct: 193 IAEMTDDEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLEVIKKLGYTAPTPIQAQ 252
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ + EGP AVVM PTRELA
Sbjct: 253 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL---EQMEGPVAVVMTPTRELA 309
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F LG++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 310 VQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKGAEIIVCTPGRMIDLLTANSGRVT 369
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSA
Sbjct: 370 NLKRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD------------RQTVLFSA 412
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL----DELG 513
T P ++ LARK LR P+ +T+G I Q V + E KF+RL +L +E
Sbjct: 413 TFPRQMDSLARKILRKPLEITVGGRSVVAPEIDQIVEVRDEDSKFNRLLEILGQTYNEDP 472
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
+ ++FV+ ++ AD + + L + GY +LHGGK Q R+ ++ F++ +++AT V
Sbjct: 473 ESRTLIFVDRQEAADNLLRELLRRGYLCMSLHGGKDQVDRDSTIADFKSGVVPIVIATSV 532
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ + VINYD P ++E Y HR GRTGRAG G TF+T D+ + L
Sbjct: 533 AARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQDRYSVDIYRAL 592
Query: 634 IQSNSPVPPEL 644
SN+ VP EL
Sbjct: 593 KASNAAVPKEL 603
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTVVPPDLEK 751
>gi|303324443|ref|XP_003072209.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240111919|gb|EER30064.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1197
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 252/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+ + + R + + I +G +P+P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 529 LAELNDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQ 588
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 589 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL--EN-MEGPVGLIMTPTRELA 645
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 646 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVT 705
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ SN++P R T +FSA
Sbjct: 706 NLRRVTYVVLDEADRMFDMGFEPQVMKII-----SNIRPS------------RQTVLFSA 748
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G + I+Q V + E+ KF RL LL L
Sbjct: 749 TFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENTKFVRLLELLGNLYSDDN 808
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + VL+AT
Sbjct: 809 NEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIAT 868
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 869 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 928
Query: 632 MLIQSNSPVPPELAK 646
L QS VP + K
Sbjct: 929 ALKQSGQSVPEAVQK 943
>gi|256088555|ref|XP_002580396.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1544
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 255/441 (57%), Gaps = 25/441 (5%)
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
F R + + +L +M++ D + +R NI +G + P+P+RNW + ++ LL ++
Sbjct: 807 FPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGRECPKPLRNWVQAGISSRLLACLK 866
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
R + P+PIQ A+P+ + RD+IGIA+TGSGKT AF++P++ ++ P+ N +G
Sbjct: 867 RNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQAPL---NPGDG 923
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P A+++APTRELA QI +ET K + V + GG I EQ +++G E+++ TPGR
Sbjct: 924 PIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGAEIIVCTPGR 983
Query: 388 LIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
+ID L R L++C+YVVLDEADRM D+GFEPQV+ +++ N +P+
Sbjct: 984 MIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIE-----NCRPD------- 1031
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
R T MFSAT P +E LARK L P+ + IG + QH ++ E EK +
Sbjct: 1032 -----RQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYK 1086
Query: 505 LQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+ LL ++ + +VFV +++AD + + L K GY +LHGG Q R+ + F+
Sbjct: 1087 VLELLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDFKRG 1146
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+L+AT VA RG+D+ D+ VINYD P + E Y HR GRTGRAG+ G A TFLT
Sbjct: 1147 NIRLLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQE 1206
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
D+ + QS P EL
Sbjct: 1207 RSAGDVVRAFKQSGQKPPEEL 1227
>gi|308081024|ref|NP_001183303.1| uncharacterized protein LOC100501699 [Zea mays]
gi|238010618|gb|ACR36344.1| unknown [Zea mays]
Length = 643
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 251/425 (59%), Gaps = 23/425 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 159 EDIPVETSGHDVPAPVNTFAEIDLGDALNENIRRCKYVKPTPLQRYAIPISIAGRDLMAC 218
Query: 295 AETGSGKTAAFVLPMLTYISRLPPI---SEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF P+++ I + P S P A++++PTREL+ QI EE KFA
Sbjct: 219 AQTGSGKTAAFCFPIISGILKSPKPHQRSRSTRTACPLALILSPTRELSVQIHEEARKFA 278
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ G++VV GG I Q + +G E+++ATPGRL+D LER L Y+ LDEAD
Sbjct: 279 YQTGVRVVVAYGGAPITNQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEAD 338
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM+DMGFEPQ+ +++ M +R R T +FSAT P ++R+A +L
Sbjct: 339 RMLDMGFEPQIRKIVEGMDM-------------PQRGERQTMLFSATFPKEIQRMAADFL 385
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKT------AIVFVNTK 524
+ + + +G G +T+LI Q V + +S+K S L L+ + + T +VFV TK
Sbjct: 386 ADYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSYLMDLIHAQKANGTHGKHALTLVFVETK 445
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD + L + G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VA
Sbjct: 446 RGADALEDWLFRNGFPATSIHGDRTQQEREHALRSFKSGATPILVATDVAARGLDIPHVA 505
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
HVIN+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L ++ ++N VP L
Sbjct: 506 HVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTTLARPLSDLMKEANQEVPKWL 565
Query: 645 AKHEA 649
+ A
Sbjct: 566 DGYAA 570
>gi|159131126|gb|EDP56239.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus A1163]
Length = 1211
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 250/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L EMT+ + R + + I +G +P+P+ W++ L + L ++++GY+NP+ IQ
Sbjct: 545 LAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQ 604
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 605 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPL--EN-MEGPIGLIMTPTRELA 661
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 662 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVT 721
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ +N++P+ R T +FSA
Sbjct: 722 NLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD------------RQTVLFSA 764
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L P+ + +G I+Q V + E KF RL +L L
Sbjct: 765 TFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDA 824
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 825 NEDARALIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 884
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 885 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 944
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 945 ALRQSGQKVP 954
>gi|357495793|ref|XP_003618185.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493200|gb|AES74403.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 718
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 244/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++A E+LR V+ G+ P+PIQ + P+ LQ +D++
Sbjct: 146 YRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIV 205
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP ++ R + N GP +V++PTRELA QI++E VKF+
Sbjct: 206 AIAKTGSGKTLGYLLPAFIHLKR----TNNNAKMGPTVLVLSPTRELATQIQDEAVKFSK 261
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q I +G ++V+ATPGRL D LE R L+Q +Y+VLDEADR
Sbjct: 262 TSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADR 321
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ +P+ R T MF+AT P V R+A L
Sbjct: 322 MLDMGFEPQIRKIVNGVPAR-----------------RQTLMFTATWPKEVRRIAADLLV 364
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NPV V IG + A + I+QH+ ++ EK RL+ +L + G K I+F +TKK D
Sbjct: 365 NPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQGSKI-IIFCSTKKMCD 423
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ R+ L FR+ R VLVATDVA RG+D+ D+ V+N
Sbjct: 424 QLARNLTRQ-FGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVN 482
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+D P +E Y HRIGRTGRAG TG+A TF D DL ++L +N VPPEL
Sbjct: 483 FDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPEL 538
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 368 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 427
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 428 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 484
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 485 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 544
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 545 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 587
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 588 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 647
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 648 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 707
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 708 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 767
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 768 GTAVPPDLEK 777
>gi|70995215|ref|XP_752371.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
gi|74672743|sp|Q4WT99.1|PRP5_ASPFU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|66850006|gb|EAL90333.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
Length = 1211
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 250/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L EMT+ + R + + I +G +P+P+ W++ L + L ++++GY+NP+ IQ
Sbjct: 545 LAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQ 604
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 605 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPL--EN-MEGPIGLIMTPTRELA 661
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 662 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVT 721
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ +N++P+ R T +FSA
Sbjct: 722 NLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD------------RQTVLFSA 764
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L P+ + +G I+Q V + E KF RL +L L
Sbjct: 765 TFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDA 824
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 825 NEDARALIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 884
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 885 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 944
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 945 ALRQSGQKVP 954
>gi|256088557|ref|XP_002580397.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1500
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 255/441 (57%), Gaps = 25/441 (5%)
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
F R + + +L +M++ D + +R NI +G + P+P+RNW + ++ LL ++
Sbjct: 763 FPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGRECPKPLRNWVQAGISSRLLACLK 822
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
R + P+PIQ A+P+ + RD+IGIA+TGSGKT AF++P++ ++ P+ N +G
Sbjct: 823 RNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQAPL---NPGDG 879
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P A+++APTRELA QI +ET K + V + GG I EQ +++G E+++ TPGR
Sbjct: 880 PIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGAEIIVCTPGR 939
Query: 388 LIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
+ID L R L++C+YVVLDEADRM D+GFEPQV+ +++ N +P+
Sbjct: 940 MIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIE-----NCRPD------- 987
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
R T MFSAT P +E LARK L P+ + IG + QH ++ E EK +
Sbjct: 988 -----RQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYK 1042
Query: 505 LQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+ LL ++ + +VFV +++AD + + L K GY +LHGG Q R+ + F+
Sbjct: 1043 VLELLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDFKRG 1102
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+L+AT VA RG+D+ D+ VINYD P + E Y HR GRTGRAG+ G A TFLT
Sbjct: 1103 NIRLLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQE 1162
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
D+ + QS P EL
Sbjct: 1163 RSAGDVVRAFKQSGQKPPEEL 1183
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 259/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + S E E EGP AV+M PTREL
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI--MDQWSSE-EGEGPIAVIMTPTRELT 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|359487443|ref|XP_002267581.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
vinifera]
Length = 617
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 256/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P + +++E L L + R Y P+P+Q AIP+ + RD++
Sbjct: 138 EDIPVDTSGDNVPPAVNSFSEIDLGDALNLNIRRCKYVKPTPVQRHAIPISIAGRDLMAC 197
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + P A++++PTREL+ QI +E KF++
Sbjct: 198 AQTGSGKTAAFCFPIISGIMKGQYAQRPRGSRTAYPLALILSPTRELSCQIHDEAKKFSY 257
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEADR
Sbjct: 258 QTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARISLQMVQYLALDEADR 317
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA +L
Sbjct: 318 MLDMGFEPQIRRIVEQM---DMPP----------RGVRQTMLFSATFPKEIQRLASDFLA 364
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELG----DKTAIVFVNTKK 525
N + + +G G +T+LI Q V ++ES+K S L LL E G +VFV TKK
Sbjct: 365 NYIFLAVGRVGSSTDLIVQRVEFVQESDKRSHLMDLLHAQRENGTHGKQALTLVFVETKK 424
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG +SQ++RE +L F++ +LVATDVA RG+DIP VAH
Sbjct: 425 GADALEHWLCINGFPATSIHGDRSQQEREHALRLFKSGATPILVATDVAARGLDIPHVAH 484
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGKTG+AT F +++ + L +++ +SN VP L+
Sbjct: 485 VVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARGLAELMQESNQEVPAWLS 544
Query: 646 KHEA 649
++ A
Sbjct: 545 RYAA 548
>gi|256088559|ref|XP_002580398.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1476
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 255/441 (57%), Gaps = 25/441 (5%)
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
F R + + +L +M++ D + +R NI +G + P+P+RNW + ++ LL ++
Sbjct: 739 FPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGRECPKPLRNWVQAGISSRLLACLK 798
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
R + P+PIQ A+P+ + RD+IGIA+TGSGKT AF++P++ ++ P+ N +G
Sbjct: 799 RNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQAPL---NPGDG 855
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P A+++APTRELA QI +ET K + V + GG I EQ +++G E+++ TPGR
Sbjct: 856 PIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGAEIIVCTPGR 915
Query: 388 LIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
+ID L R L++C+YVVLDEADRM D+GFEPQV+ +++ N +P+
Sbjct: 916 MIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIE-----NCRPD------- 963
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
R T MFSAT P +E LARK L P+ + IG + QH ++ E EK +
Sbjct: 964 -----RQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYK 1018
Query: 505 LQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+ LL ++ + +VFV +++AD + + L K GY +LHGG Q R+ + F+
Sbjct: 1019 VLELLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDFKRG 1078
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+L+AT VA RG+D+ D+ VINYD P + E Y HR GRTGRAG+ G A TFLT
Sbjct: 1079 NIRLLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQE 1138
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
D+ + QS P EL
Sbjct: 1139 RSAGDVVRAFKQSGQKPPEEL 1159
>gi|388508122|gb|AFK42127.1| unknown [Medicago truncatula]
Length = 499
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 259/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ +G +P+P++++++ +L V++ G+ P+PIQ P+
Sbjct: 69 MTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPM 128
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P + + +GP +V+APTRELA QI+
Sbjct: 129 ALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL---DPGDGPIVLVLAPTRELAVQIQ 185
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E++IATPGRLID LE + L + Y
Sbjct: 186 QEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTY 245
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ ++P+ R T +SAT P VE
Sbjct: 246 LVLDEADRMLDMGFDPQIRKIV-----PQIRPD------------RQTLYWSATWPKEVE 288
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR++L NP V IG+ KA I Q+V ++ E +K+ +L +LL+++ D + I +F++
Sbjct: 289 QLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMD 348
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 349 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 408
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIG+TGRAG G A TF T + +L +L ++ V
Sbjct: 409 VKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSS 468
Query: 643 ELA 645
ELA
Sbjct: 469 ELA 471
>gi|119495979|ref|XP_001264763.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143359979|sp|A1D373.1|PRP5_NEOFI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119412925|gb|EAW22866.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 1193
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 249/430 (57%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L EMT+ + R + + I +G +P+P+ W++ L + L + R+GY+NP+ IQ
Sbjct: 527 LAEMTDEEAASLRLELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIHRLGYENPTSIQSQ 586
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 587 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIRDQRPL--EN-MEGPIGLIMTPTRELA 643
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 644 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVT 703
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ +N++P+ R T +FSA
Sbjct: 704 NLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD------------RQTVLFSA 746
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L P+ + +G I+Q V + E KF RL +L L
Sbjct: 747 TFPRNMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDA 806
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + + L + GY ++HGGK Q R+ ++E F+ + +L+AT
Sbjct: 807 NEDARALIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPILIAT 866
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 867 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 926
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 927 ALRQSGQKVP 936
>gi|119173770|ref|XP_001239279.1| DEAD/DEAH box RNA helicase [Coccidioides immitis RS]
gi|118597491|sp|Q1DHB2.1|PRP5_COCIM RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|392869485|gb|EJB11830.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
immitis RS]
Length = 1197
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 252/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+ + + R + + I +G +P+P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 529 LAELNDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQ 588
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 589 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL--EN-MEGPVGLIMTPTRELA 645
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 646 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVT 705
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ SN++P R T +FSA
Sbjct: 706 NLRRVTYVVLDEADRMFDMGFEPQVMKII-----SNIRPS------------RQTVLFSA 748
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G + I+Q V + E+ KF RL LL L
Sbjct: 749 TFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENTKFVRLLELLGNLYSDDN 808
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + VL+AT
Sbjct: 809 NEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIAT 868
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 869 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 928
Query: 632 MLIQSNSPVPPELAK 646
L QS VP + K
Sbjct: 929 ALKQSGQSVPEAVQK 943
>gi|390601156|gb|EIN10550.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 966
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 254/447 (56%), Gaps = 30/447 (6%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+ F R + + + + MT+ D + R + + I +G PRP+ W+ L L
Sbjct: 257 YEPF--RKEFYIAPPDIAAMTDEDAELVRLELDSIKIRGVDCPRPVTKWSHFGLPASCLE 314
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
++R+ + P+PIQ AIP + RDVIG+A+TGSGKT AF+LPM +I P+ +
Sbjct: 315 VIKRLNFTAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL---EQ 371
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP V+M PTRELA QI E F L ++ V GG I++Q +++G E+++ T
Sbjct: 372 MEGPIGVIMTPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIADMKKGAEIIVCT 431
Query: 385 PGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + Y+VLDEADRM DMGFEPQV+ +++ N++P+
Sbjct: 432 PGRMIDLLTANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMKIIN-----NIRPD---- 482
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P ++ LARK LR P+ +T+G I Q V + E K
Sbjct: 483 --------RQTVLFSATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRPEDTK 534
Query: 502 FSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
F+RL +L ++ ++ ++FV+ ++ AD + + L + GY +LHGGK Q R+ ++
Sbjct: 535 FTRLLEILGQMYNEDPECRTLIFVDRQEAADNLLRELLRRGYLCMSLHGGKEQVDRDQTI 594
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
F++ +++AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG G TF
Sbjct: 595 ADFKSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTF 654
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+T D+ + L SN+PVP EL
Sbjct: 655 ITEEQERYSVDIYRALKASNAPVPAEL 681
>gi|321459437|gb|EFX70490.1| hypothetical protein DAPPUDRAFT_61214 [Daphnia pulex]
Length = 509
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 181/424 (42%), Positives = 251/424 (59%), Gaps = 27/424 (6%)
Query: 230 WRIFREDFNIS-YKGSK---IPRPMRNWAEG-KLTPELLRAVERVGYKNPSPIQMAAIPL 284
+R+ + IS YK IP P+ +A+ PELL AV+ +K+PSPIQ A P+
Sbjct: 36 FRLTHNNITISHYKADDDRPIPNPVLTFAQAFAHYPELLEAVQNQQFKDPSPIQSQAWPV 95
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ D+IGIA+TG+GKT AF+LP + +I PIS E GP ++MAPTRELAQQIE
Sbjct: 96 LLKGHDLIGIAQTGTGKTLAFLLPAMIHIEG-QPISRA-ERSGPSVLIMAPTRELAQQIE 153
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
E KF + GIK + + GG +Q + +G E+V+ATPGRL D ++ + +Y
Sbjct: 154 REVAKFP-WKGIKCLCVYGGGDRRQQIGAVAKGVEIVVATPGRLYDLMQAGALKTSSVSY 212
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
VVLDEADRM+D+GFEPQ+ +L +++P+ R M SAT P +
Sbjct: 213 VVLDEADRMLDLGFEPQIKKIL-----IDVRPD------------RQIIMTSATWPEGIR 255
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVN 522
R+A +Y+ NP+ V +GT A ++QHV ++ E EK RL + L + AIVFV
Sbjct: 256 RIANEYMDNPLQVCVGTLDLAACHSVTQHVEILDEEEKRPRLIDFIRALDPNDKAIVFVG 315
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
K AD VA L +G +HG + Q RE +L R+ +L+ATDVA RGIDI D
Sbjct: 316 RKLVADQVASELSLIGISCQCIHGDREQIDREQALADLRSGDVKLLIATDVASRGIDIKD 375
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
+ H++NYD P + E Y HRIGRTGRAG+TG+A +F+T D DL +L ++N +PP
Sbjct: 376 ITHILNYDFPRHAEEYVHRIGRTGRAGRTGIAISFMTREDWSKASDLIDILKEANQEIPP 435
Query: 643 ELAK 646
EL K
Sbjct: 436 ELIK 439
>gi|170064174|ref|XP_001867417.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167881558|gb|EDS44941.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 663
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 175/413 (42%), Positives = 242/413 (58%), Gaps = 24/413 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I+ G IP P+ + EG +L + R GYK P+ IQ + RD++GIA+TG
Sbjct: 66 ITVIGKNIPAPILYFEEGGFPSSILAEITRQGYKEPTQIQAVGWSIATSGRDMVGIAKTG 125
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A++LP L +IS P + +GP A+V+APTRELAQQI++ F + +
Sbjct: 126 SGKTLAYILPALIHISNQPRLMR---GDGPIALVLAPTRELAQQIQQVCDDFGRRMSVMN 182
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
I GG S Q +R+G E+VIATPGRLID LE L + Y+VLDEADRM+DMGF
Sbjct: 183 TCIFGGASKMGQANDLRRGVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGF 242
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ ++ S ++P+ R M+SAT P + +LA ++LR+ + +
Sbjct: 243 EPQIRKII-----SQIRPD------------RQVLMWSATWPKEIRKLAEEFLRDYIQIN 285
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNADMVAKNL 534
IG+ A E I Q + +E EK SRL +LL E+G D AIVFV TK+ D +A +
Sbjct: 286 IGSLNLAANENILQIIECCQEYEKESRLFKLLAEIGKQGDNKAIVFVETKRKVDQIAGII 345
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+ G+R +HG K+Q+ R+ L FR +LVATDVA RG+D+ DV +VIN+D P N
Sbjct: 346 KRNGWRADGIHGDKTQKDRDYVLNTFRRMNNGILVATDVASRGLDVDDVKYVINFDFPNN 405
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
E Y HRIGRTGR+ G A TF T ++ DL Q+L +N V PEL ++
Sbjct: 406 TEDYIHRIGRTGRSTNKGTAYTFFTPANSSKANDLIQVLKTANQYVNPELQEY 458
>gi|2558533|emb|CAA73349.1| putative RNA helicase (DEAD box) [Danio rerio]
Length = 688
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 255/427 (59%), Gaps = 32/427 (7%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G P+P+ ++ + ++ ++ + Y P+P+Q AIP+ +RD++
Sbjct: 192 DDIPVEATGHNGPQPIDSFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMAC 251
Query: 295 AETGSGKTAAFVLPMLTYISRLPP---------ISEENEAEG-----PYAVVMAPTRELA 340
A+TGSGKTAAF+LP+L+ I P ++EN G P ++V+APTRELA
Sbjct: 252 AQTGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELA 311
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI +E KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+
Sbjct: 312 LQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 371
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
CNY+VLDEADRM+DMGFEPQ+ ++ D MP L R T MFSAT
Sbjct: 372 YCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGL---------------RQTMMFSAT 416
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTA 517
P ++ LAR +L + + + +G G +E I+Q VV ++E++K S L LL+ G D
Sbjct: 417 FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLT 476
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VFV TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG
Sbjct: 477 LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG 536
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++
Sbjct: 537 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAK 596
Query: 638 SPVPPEL 644
VP L
Sbjct: 597 QEVPSWL 603
>gi|402224487|gb|EJU04549.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 486
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/448 (39%), Positives = 260/448 (58%), Gaps = 37/448 (8%)
Query: 214 DRHWSEKKLEEM--------------TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLT 259
D +WS + LE+ T+R+ FR + +G +P+P+ + E
Sbjct: 10 DINWSTQNLEKFEKNFYVEDKRVSARTDREVEDFRRKHEMKIQGRGVPKPITTFEEAGFP 69
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
+L ++ G+ P+PIQ A P+ L RDV+ IA+TGSGKT AF LP + +I+ P +
Sbjct: 70 DYILTTIKAQGFAAPTPIQCQAWPMALSGRDVVAIAQTGSGKTIAFALPAMLHINAQPLL 129
Query: 320 SEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
+ +GP A+V+APTRELA QI++E KF I+ ++ GG +Q +++G E
Sbjct: 130 TP---GDGPIALVLAPTRELAVQIQQECTKFGSNSRIRNTAVYGGAPKGQQIRDLQRGVE 186
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
VVIATPGRLID LE L + Y+V+DEADRM+DMGFEPQ+ ++ ++P+
Sbjct: 187 VVIATPGRLIDMLESGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIV-----GQIRPD-- 239
Query: 440 DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKE 498
R T MFSAT P V+RLA+ +L++ + V IG+ A I Q V + +
Sbjct: 240 ----------RQTLMFSATWPKEVQRLAQDFLKDFIQVNIGSMDLSANPNIEQIVEVCSD 289
Query: 499 SEKFSRLQRLLDELGDKTA--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREIS 556
EK +L + LD++ ++ A ++FV TK+ AD + K L + G+ +HG K Q +R+
Sbjct: 290 FEKRGKLLKHLDKISNENAKVLIFVGTKRTADDITKYLRQDGWPALAIHGDKEQRERDWV 349
Query: 557 LEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATT 616
L F+ R +L+ATDVA RG+D+ DV +VINYD P NIE Y HRIGRTGRAG TGV+ T
Sbjct: 350 LSEFKASRSPILIATDVASRGLDVKDVGYVINYDFPNNIEDYIHRIGRTGRAGNTGVSYT 409
Query: 617 FLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ T + +L ++L + VPP+L
Sbjct: 410 YFTTDNAKQARELIKILRDAQMNVPPQL 437
>gi|159475485|ref|XP_001695849.1| hypothetical protein CHLREDRAFT_118630 [Chlamydomonas reinhardtii]
gi|158275409|gb|EDP01186.1| predicted protein [Chlamydomonas reinhardtii]
Length = 710
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/430 (39%), Positives = 254/430 (59%), Gaps = 34/430 (7%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I +G IP P+R+W + L+ +L +++ G+ P PIQ A+P+ + RD IGIA+T
Sbjct: 41 GIKVRGKNIPAPVRSWTQAGLSSRILEVLKKRGFDRPLPIQAQALPIIMSGRDCIGIAKT 100
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AFVLPM+ +I P+ + +GP A+V+APTREL QI +E FA LG+
Sbjct: 101 GSGKTGAFVLPMMRHIKDQRPL---EQGDGPVALVIAPTRELVAQIAKEAKAFAKPLGLN 157
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
+++ GG + Q +++G E+V TPGR+ID L + L + Y+V+DEADRM
Sbjct: 158 ALAVFGGSGVANQITELKRGVEIVACTPGRMIDLLVTSNGKITNLRRVTYLVMDEADRMF 217
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ ++ N++P+ R T MFSAT P AVE LARK L++P
Sbjct: 218 DMGFEPQISRII-----QNIRPD------------RQTVMFSATFPRAVEALARKVLQDP 260
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT-AIVFVNTKKNADMVAKN 533
V + +G + I+Q V + E E+F RL +L E ++ ++FV+ +++ D + ++
Sbjct: 261 VEIQVGGRSVVNDSITQWVELRPEKERFHRLLEILGEWYERGKLLIFVDKQESCDNLFRD 320
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L + GY +LHGGK Q RE ++ F+ N+LVAT +A RG+D+ D+ V+NYD+P
Sbjct: 321 LLRYGYPCLSLHGGKDQSDRESTIADFKGAVCNILVATSIAARGLDVKDLVLVVNYDVPN 380
Query: 594 NIEMYTHR--IGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL------- 644
+ E Y HR +GRTGRAG G A TF++ + DL + L +S +PVP +L
Sbjct: 381 HHEDYVHRCVVGRTGRAGAKGTAITFISEEEERYAPDLVKALRESGAPVPQDLQALADSF 440
Query: 645 -AKHEASKFK 653
KH+A K
Sbjct: 441 NTKHKAGLVK 450
>gi|428671738|gb|EKX72653.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 942
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/430 (38%), Positives = 251/430 (58%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFRE-DFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ M E + FR+ + NI +G + PRP+ ++++ L +L +++ Y+ P PIQM
Sbjct: 316 ITAMKEHEVDAFRKTNGNIRIRGKQCPRPIYSFSQCGLPDPILSLLQKREYEKPFPIQMQ 375
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
IP + RDVIGIAETGSGKT AF+LP + ++ P + E +G ++++PTREL
Sbjct: 376 CIPALMCGRDVIGIAETGSGKTLAFLLPAIRHVLDQPKL---REMDGMIVLIISPTRELT 432
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E K + ++VV++ GG I +Q +++G E+V TPGRLID L + +
Sbjct: 433 IQISKECSKLCKTVDLRVVAVYGGAGIGKQLNSLKRGAEIVCGTPGRLIDVLTTSKGKVT 492
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + ++VLDEADRM DMGF PQ+ ++D N++P+ R T +FSA
Sbjct: 493 NLRRVTFLVLDEADRMFDMGFSPQITAIID-----NIRPD------------RQTALFSA 535
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T PP +E LA+K L P+ + +G GK+ + QHVV++ E K L +LL E + +
Sbjct: 536 TFPPVIENLAKKILTKPLQIIVGERGKSASQVDQHVVILPEGRKIYYLLKLLGEWHEHGS 595
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FVN + +AD + L K GY LHGG+ Q RE +L+ FR + +L++T +A R
Sbjct: 596 IIIFVNRQLDADNLFAELLKYGYECAVLHGGQDQTDREFTLQDFREGKKGILISTSIAAR 655
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
GID+ V VINY P + E Y HR+GRTGRAG G + TFL + +D+ + L +
Sbjct: 656 GIDVKSVVLVINYAAPDHFEDYVHRVGRTGRAGNFGTSYTFLAPEEASKSHDIIRALKLA 715
Query: 637 NSPVPPELAK 646
N VP EL +
Sbjct: 716 NQDVPEELTQ 725
>gi|242080401|ref|XP_002444969.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
gi|241941319|gb|EES14464.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
Length = 946
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 263/444 (59%), Gaps = 27/444 (6%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + EMT + ++R++ + G +P+P++ W + T +LL ++++G++ P PIQ
Sbjct: 334 KDIREMTSEEVAVYRKELELKVHGKDVPKPIKTWLQSGQTSKLLDTIKKLGFEKPMPIQA 393
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IG+A+TGSGKT AF+LPML ++ PP++ +GP +++APTREL
Sbjct: 394 QALPVIMSGRDCIGVAKTGSGKTLAFLLPMLRHVKDQPPVAP---GDGPVGLIVAPTREL 450
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QI + KF+ LGI V++ GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 451 VVQIYLDIKKFSKVLGISCVAVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSNGKI 510
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + ++V+DEADRM DMGFEPQ+ ++ + R R T +FS
Sbjct: 511 TNLRRVTFLVMDEADRMFDMGFEPQITRIIQNI-----------------RRDRQTVLFS 553
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + ESE+F RL LL + DK
Sbjct: 554 ATFPRQVEMLARKVLIKPVEIQVGGRSVVNKDITQVVEVRPESERFLRLLELLGKWCDKG 613
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV+T+ D + KNL + GY+ +LHGGK Q RE ++ F++ ++L+AT VA
Sbjct: 614 KILVFVHTQDKCDSLLKNLFQHGYQCLSLHGGKDQADRESTVADFKSNICSLLIATSVAA 673
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ V+NYD+P + E Y HR+GRTGRAG+ G A TF++ + DL + L
Sbjct: 674 RGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGSAVTFISEEEERYAPDLVKALEL 733
Query: 636 SNSPVPPE---LAKHEASKFKPGT 656
S VP + LA +K K GT
Sbjct: 734 SEQTVPDDLKALADRFMAKVKQGT 757
>gi|28574962|ref|NP_648062.2| CG10077, isoform A [Drosophila melanogaster]
gi|442630633|ref|NP_001261491.1| CG10077, isoform D [Drosophila melanogaster]
gi|20976828|gb|AAM27489.1| GH10652p [Drosophila melanogaster]
gi|28380590|gb|AAF50635.2| CG10077, isoform A [Drosophila melanogaster]
gi|220947070|gb|ACL86078.1| CG10077-PA [synthetic construct]
gi|220960420|gb|ACL92746.1| CG10077-PA [synthetic construct]
gi|440215390|gb|AGB94186.1| CG10077, isoform D [Drosophila melanogaster]
Length = 818
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/410 (40%), Positives = 245/410 (59%), Gaps = 24/410 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I+ KG ++P P + EG ++ + + G+ P+ IQ P+ + RD++G+A+TG
Sbjct: 145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTG 204
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++ ++F ++
Sbjct: 205 SGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRN 261
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
I GG +Q + +G E+VIATPGRLID LER L +C Y+VLDEADRM+DMGF
Sbjct: 262 TCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGF 321
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ ++ ++P+ R M+SAT P V +LA ++L N + V
Sbjct: 322 EPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQLAEEFLNNYIQVN 364
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNTKKNADMVAKNL 534
IG+ A I Q V + E+EK +L +LL ++ + I+FV TKK D + +N+
Sbjct: 365 IGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNI 424
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
+ G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+ DV VINYD P N
Sbjct: 425 SRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSN 484
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HRIGRTGR+ TG A T T + + DL Q+L ++N + P+L
Sbjct: 485 SEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKL 534
>gi|345323504|ref|XP_001512924.2| PREDICTED: ATP-dependent RNA helicase DDX3X [Ornithorhynchus
anatinus]
Length = 794
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 293 DDIPVEATGSNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 352
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 353 AQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 412
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 413 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 472
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 473 LVLDEADRMLDMGFEPQIRRIVEQDTMPQKGI---------------RHTMMFSATFPKE 517
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 518 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 577
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 578 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 637
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 638 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 697
Query: 642 PEL 644
L
Sbjct: 698 SWL 700
>gi|335306800|ref|XP_003360577.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 2 [Sus
scrofa]
Length = 644
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 254/423 (60%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ PR + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|328779178|ref|XP_623193.3| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Apis
mellifera]
Length = 588
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 255/436 (58%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG IP P++ + EG P +L + + GY P+ IQ P+ L RD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLEEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +VLP + +I P +S +GP A+++APTRELAQQI+E F
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQPRLSN---GDGPIALILAPTRELAQQIQEVANCFGE 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 212 AAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 272 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLS 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNAD 528
+ + + IG+ A I Q V + +E EK +L RLL E+G++ I+FV TK+ D
Sbjct: 315 DYMHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKENKTIIFVETKRKVD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ F++ R +LVATDVA RG+D+ DV +VIN
Sbjct: 375 DITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVAARGLDVDDVKYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ + P L +
Sbjct: 435 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLIEVLREAGQNINPRLTEM- 493
Query: 649 ASKFKPGTIPDRPPRR 664
A K GT R +R
Sbjct: 494 AELAKSGTYGSRSGKR 509
>gi|327268476|ref|XP_003219023.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 1 [Anolis
carolinensis]
Length = 713
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 212 DDIPVEATGNNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMAC 271
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 272 AQTGSGKTAAFLLPILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 331
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 332 EEARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 391
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 392 LVLDEADRMLDMGFEPQIRRIVEKDTMPPKGV---------------RQTMMFSATFPKE 436
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV +++S+K S L LLD G D +VFV
Sbjct: 437 IQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEDSDKRSFLLDLLDATGKDSLTLVFV 496
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG+DI
Sbjct: 497 ETKKGADSLEDFLFREGYACTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDIS 556
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 557 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 616
Query: 642 PEL 644
L
Sbjct: 617 SWL 619
>gi|327268480|ref|XP_003219025.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 3 [Anolis
carolinensis]
Length = 709
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 208 DDIPVEATGNNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMAC 267
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 268 AQTGSGKTAAFLLPILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 327
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 328 EEARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 387
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 388 LVLDEADRMLDMGFEPQIRRIVEKDTMPPKGV---------------RQTMMFSATFPKE 432
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV +++S+K S L LLD G D +VFV
Sbjct: 433 IQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEDSDKRSFLLDLLDATGKDSLTLVFV 492
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG+DI
Sbjct: 493 ETKKGADSLEDFLFREGYACTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDIS 552
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 553 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 612
Query: 642 PEL 644
L
Sbjct: 613 SWL 615
>gi|340380989|ref|XP_003389004.1| PREDICTED: putative ATP-dependent RNA helicase an3-like [Amphimedon
queenslandica]
Length = 763
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 250/422 (59%), Gaps = 27/422 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+ + G P+ + N+++ +P + ++ Y P+P+Q +IP+ + +RD++
Sbjct: 291 EEVKVEATGQDCPKNIENFSDMNFSPIIQENIKLAQYSKPTPVQKHSIPMIMNRRDLMSC 350
Query: 295 AETGSGKTAAFVLPMLTYI---SRLPPISEENEAEG-----PYAVVMAPTRELAQQIEEE 346
A+TGSGKTAAF+LP+L+ + PP + A G P ++++APTRELA QI +E
Sbjct: 351 AQTGSGKTAAFLLPILSLLFEDGPPPPPPDPRYASGRRKQYPLSLILAPTRELASQIYDE 410
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF++ ++ + GG I Q + +GC +++ATPGRL+D LER L C ++V
Sbjct: 411 ARKFSYRSRVRPCVVYGGADIGGQIRDLEKGCLLLVATPGRLVDMLERGRVGLELCRFLV 470
Query: 407 LDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
LDEADRM+DMGFEPQ+ ++ D MP P E R T MFSAT P ++
Sbjct: 471 LDEADRMLDMGFEPQIRRIVEQDRMP-----PCGE----------RQTLMFSATFPKEMQ 515
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAI--VFVN 522
LAR +L N + + +G G +E I+Q +V + E +K S L +LD D A+ VFV
Sbjct: 516 VLARDFLDNYIFLAVGRVGSTSENITQKIVWVDECDKRSFLLDILDASADSGALILVFVE 575
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK+ D + L GYR T +HG +SQ QRE +L F+ +LVAT VA RG+DIP+
Sbjct: 576 TKKSCDALDDYLYNQGYRCTCIHGDRSQVQREDALRSFKCAETPILVATAVAARGLDIPN 635
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V HV+N+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +LI++ VP
Sbjct: 636 VKHVVNFDLPNDIEEYVHRIGRTGRVGNLGLATSFCNDRNRNICSDLLDLLIEARQEVPS 695
Query: 643 EL 644
L
Sbjct: 696 WL 697
>gi|414881886|tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 802
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 244/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++ G E+L+ ++R G+ +P+PIQ + P+ +Q +DV+
Sbjct: 132 YRRRHEITVTGDNVPTPITSFEAGGFPSEILKEIQRAGFASPTPIQAQSWPIAMQNQDVV 191
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP +I RL + + GP +V+APTRELA QI +E VKF
Sbjct: 192 AIAKTGSGKTLGYLLPGFMHIKRL----QNSTRNGPTVLVLAPTRELATQILDEAVKFGR 247
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G +VV+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 248 SSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRKVSLKQVSYLVLDEADR 307
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P R T M++AT P V R+A L
Sbjct: 308 MLDMGFEPQIRKIVKEIPHR-----------------RQTLMYTATWPKEVRRIADDLLV 350
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
+PV VTIG+ A I+QHV ++ SEK RL+++L + G K ++F TK+ D
Sbjct: 351 HPVQVTIGSVDSLVANSSITQHVEIITPSEKQRRLEQILRSQDSGSKI-LIFCTTKRMCD 409
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+ L + + + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VIN
Sbjct: 410 QLARTLTRQ-FGASAIHGDKSQSEREKVLNQFRSGRSPILVATDVAARGLDIKDIRVVIN 468
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TGVA TF D+ DL ++L +N VP +L
Sbjct: 469 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDL 524
>gi|335306798|ref|XP_003360576.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 1 [Sus
scrofa]
Length = 660
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 254/423 (60%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ PR + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|444725250|gb|ELW65824.1| ATP-dependent RNA helicase DDX3X [Tupaia chinensis]
Length = 922
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 416 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 475
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 476 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 535
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 536 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 595
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 596 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 640
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 641 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 700
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 701 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 760
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 761 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDRNINITKDLLDLLVEAKQDVP 820
Query: 642 PEL 644
L
Sbjct: 821 SWL 823
>gi|327268478|ref|XP_003219024.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform 2 [Anolis
carolinensis]
Length = 706
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 205 DDIPVEATGNNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMAC 264
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 265 AQTGSGKTAAFLLPILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 324
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 325 EEARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 384
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 385 LVLDEADRMLDMGFEPQIRRIVEKDTMPPKGV---------------RQTMMFSATFPKE 429
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV +++S+K S L LLD G D +VFV
Sbjct: 430 IQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEDSDKRSFLLDLLDATGKDSLTLVFV 489
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG+DI
Sbjct: 490 ETKKGADSLEDFLFREGYACTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDIS 549
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 550 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 609
Query: 642 PEL 644
L
Sbjct: 610 SWL 612
>gi|301120023|ref|XP_002907739.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262106251|gb|EEY64303.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 639
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/416 (37%), Positives = 250/416 (60%), Gaps = 21/416 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ +AE +L PE++R +E Y P+P+Q +IP+GL RD++
Sbjct: 148 DDIPVETSGENVPDPVTEFAEEQLGPEVIRNLELCKYSKPTPVQKYSIPIGLAGRDMMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG------PYAVVMAPTRELAQQIEEETV 348
A+TGSGKT F+ P L + R+ + G P ++++PTRELA QI +E
Sbjct: 208 AQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHGRSRKIFPAGLILSPTRELASQIHDEAK 267
Query: 349 KFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLD 408
KF + GI V I GG + Q + +GC++++ATPGRL+D +ER L+ +++LD
Sbjct: 268 KFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLSCIRFLILD 327
Query: 409 EADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLAR 468
EADRM+DMGFEPQ+ ++ E E++ +R T+MFSAT P ++RLA
Sbjct: 328 EADRMLDMGFEPQIRRIV------------EQEDMPRER---QTFMFSATFPCEIQRLAS 372
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNAD 528
+LR+ + +T+G G A++ + Q V +++ +K L R L+++ D +VFV TK+ AD
Sbjct: 373 DFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGAD 432
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ L + G+ T++HG +SQ +RE +L F++ R VLVATDVA RG+DI V VIN
Sbjct: 433 FLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVIN 492
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+D+P NI+ Y HRIGRTGR G G A + + + ++ ++ +++ ++ +P L
Sbjct: 493 FDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMAENGQEIPAFL 548
>gi|143454263|sp|Q5N7W4.2|RH30_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 30
Length = 666
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 256/425 (60%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ M++ D +R +I+ +G +P+P+R + E ++A+ + G+ P+PIQ
Sbjct: 222 VQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQG 281
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIA+TGSGKT +++LP L ++ P + + +GP +++APTRELA
Sbjct: 282 WPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRL---EQGDGPIVLILAPTRELAV 338
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI++E+ KF Y + I GG Q +R+G E+VIATPGRLID LE + L +
Sbjct: 339 QIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRR 398
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T +SAT P
Sbjct: 399 VTYLVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLYWSATWPR 441
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++L+NP V IG+ KA I Q + ++ E EK+ RL +LL +L D + I +
Sbjct: 442 EVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILI 501
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F TKK+ D V + L G+ ++HG K+Q +R+ L F++ + ++ ATDVA RG+D
Sbjct: 502 FFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLD 561
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ VIN+D P +E Y HRIGRTGRAG +G A TF T + +L ++L ++
Sbjct: 562 VKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQV 621
Query: 640 VPPEL 644
V P L
Sbjct: 622 VNPAL 626
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 613 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 672
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 673 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 729
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 730 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 789
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 790 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 832
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 833 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 892
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 893 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 952
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 953 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 1012
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 1013 GTVVPPDLEK 1022
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E L R+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALVRRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|414881885|tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 711
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/416 (41%), Positives = 244/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++ G E+L+ ++R G+ +P+PIQ + P+ +Q +DV+
Sbjct: 132 YRRRHEITVTGDNVPTPITSFEAGGFPSEILKEIQRAGFASPTPIQAQSWPIAMQNQDVV 191
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP +I RL + + GP +V+APTRELA QI +E VKF
Sbjct: 192 AIAKTGSGKTLGYLLPGFMHIKRL----QNSTRNGPTVLVLAPTRELATQILDEAVKFGR 247
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G +VV+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 248 SSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRKVSLKQVSYLVLDEADR 307
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P R T M++AT P V R+A L
Sbjct: 308 MLDMGFEPQIRKIVKEIPHR-----------------RQTLMYTATWPKEVRRIADDLLV 350
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
+PV VTIG+ A I+QHV ++ SEK RL+++L + G K ++F TK+ D
Sbjct: 351 HPVQVTIGSVDSLVANSSITQHVEIITPSEKQRRLEQILRSQDSGSKI-LIFCTTKRMCD 409
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+ L + + + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VIN
Sbjct: 410 QLARTLTRQ-FGASAIHGDKSQSEREKVLNQFRSGRSPILVATDVAARGLDIKDIRVVIN 468
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TGVA TF D+ DL ++L +N VP +L
Sbjct: 469 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDL 524
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 579 LAKMSQEEVNVFRLEMEGIIVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQAQ 638
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 639 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 695
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 696 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 755
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 756 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 798
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 799 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 858
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 859 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 918
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 919 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 978
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 979 GTAVPPDLEK 988
>gi|357612893|gb|EHJ68220.1| ATP-dependent RNA helicase belle-like protein [Danaus plexippus]
Length = 717
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 248/424 (58%), Gaps = 25/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P + ++ + LT + + Y P+P+Q AIP+ L +RDV+
Sbjct: 221 EDIPVEASGDSVPEFITSFEDVNLTEIMRTNIAFARYDKPTPVQKYAIPIVLGRRDVMAC 280
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEEN----EAEGPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF++P+L + P+ + P +V+APTRELA QI +E KF
Sbjct: 281 AQTGSGKTAAFLVPILNQMYEAGPVKNAGPYIKRKQYPLGLVLAPTRELATQIYDEARKF 340
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
A+ ++ + GG SI +Q + +GC +++ATPGRL+D L R L+ C ++VLDEA
Sbjct: 341 AYRSRVRPCVVYGGSSILDQFRELERGCHLLVATPGRLVDMLTRGRVALDHCRHLVLDEA 400
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQ+ +++ N+ E R T MFSAT P ++ LA+ +
Sbjct: 401 DRMLDMGFEPQIRKIVEG---HNMPKTGE----------RQTLMFSATFPKQIQVLAQDF 447
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG--------DKTAIVFVN 522
L N V + +G G +E I+Q VV ++E +K S L LL+ D+ +VFV
Sbjct: 448 LHNYVFLAVGRVGSTSENITQKVVWVEEQDKRSFLLDLLNASNLLQRNNEEDQLTLVFVE 507
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK AD + L GY VT++HG ++Q +RE +L FRT + +LVAT VA RG+DIP
Sbjct: 508 TKKGADQLEDFLYADGYPVTSIHGDRTQREREDALRRFRTGQTPILVATAVAARGLDIPH 567
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V HVIN+D+P ++E Y HRIGRTGR G GVAT+F + + DL ++L+++ VP
Sbjct: 568 VRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDSNRGLARDLVELLVEAKQDVPN 627
Query: 643 ELAK 646
L
Sbjct: 628 WLTS 631
>gi|357495795|ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 244/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++A E+LR V+ G+ P+PIQ + P+ LQ +D++
Sbjct: 146 YRRRHEITVTGDNVPPPVTSFASSGFPSEILREVQNAGFSAPTPIQAQSWPIALQSKDIV 205
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP ++ R + N GP +V++PTRELA QI++E VKF+
Sbjct: 206 AIAKTGSGKTLGYLLPAFIHLKR----TNNNAKMGPTVLVLSPTRELATQIQDEAVKFSK 261
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q I +G ++V+ATPGRL D LE R L+Q +Y+VLDEADR
Sbjct: 262 TSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADR 321
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ +P+ R T MF+AT P V R+A L
Sbjct: 322 MLDMGFEPQIRKIVNGVPAR-----------------RQTLMFTATWPKEVRRIAADLLV 364
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NPV V IG + A + I+QH+ ++ EK RL+ +L + G K I+F +TKK D
Sbjct: 365 NPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQDQGSKI-IIFCSTKKMCD 423
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ R+ L FR+ R VLVATDVA RG+D+ D+ V+N
Sbjct: 424 QLARNLTRQ-FGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVN 482
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+D P +E Y HRIGRTGRAG TG+A TF D DL ++L +N VPPEL
Sbjct: 483 FDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIKILEGANQRVPPEL 538
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M+ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|195376137|ref|XP_002046853.1| GJ12262 [Drosophila virilis]
gi|194154011|gb|EDW69195.1| GJ12262 [Drosophila virilis]
Length = 778
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 251/429 (58%), Gaps = 24/429 (5%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
T+ + F I+ KG+++P P + EG ++ + + G+ P+ IQ +P+
Sbjct: 117 TQGETETFLSSNEITIKGNEVPTPSIEFEEGGFPDYVMNEIRKQGFTKPTAIQAQGMPIA 176
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD++ +A+TGSGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++
Sbjct: 177 LSGRDLVAVAQTGSGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQ 233
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
+F ++ I GG +Q + +G E+VIATPGRLID LER L +C Y+
Sbjct: 234 VASEFGSNTQVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTTLKRCTYL 293
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ ++P+ R M+SAT P V +
Sbjct: 294 VLDEADRMLDMGFEPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQ 336
Query: 466 LARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFV 521
LA ++L N + V IG+ A I Q V + ESEK +L +LL ++ + I+FV
Sbjct: 337 LAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDESEKIVKLIQLLTQISGENETKTIIFV 396
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK D + +N+ + G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+
Sbjct: 397 ETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVD 456
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
DV VINYD P N E Y HRIGRTGR+ TG A T T + + DL Q+L ++N +
Sbjct: 457 DVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKANDLIQVLREANQTIN 516
Query: 642 PELAKHEAS 650
P+L AS
Sbjct: 517 PKLMNMAAS 525
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 670 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 729
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 730 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 786
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 787 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 846
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 847 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 889
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 890 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 949
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 950 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 1009
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 1010 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 1069
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 1070 GTTVPPDLEK 1079
>gi|125526364|gb|EAY74478.1| hypothetical protein OsI_02369 [Oryza sativa Indica Group]
Length = 792
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/417 (42%), Positives = 245/417 (58%), Gaps = 27/417 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++ G PE+L+ ++R G+ +P+PIQ + P+ LQ +DV+
Sbjct: 132 YRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVV 191
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP +I RL + N GP +V+APTRELA QI EE VKF
Sbjct: 192 AIAKTGSGKTLGYLLPGFMHIKRL----QNNPRSGPTVLVLAPTRELATQILEEAVKFGR 247
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G +VV+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 248 SSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADR 307
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P R T M++AT P V R+A L
Sbjct: 308 MLDMGFEPQIRKIVKEIPPR-----------------RQTLMYTATWPKEVRRIAEDLLV 350
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
+PV VTIG+ + A I+Q+V ++ SEK RL+++L + G K ++F TK+ D
Sbjct: 351 HPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQDSGSKV-LIFCTTKRMCD 409
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+ L + + + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VIN
Sbjct: 410 QLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVIN 468
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
P IE Y HRIGRTGRAG TGVA TF D+ DL ++L +N VP +LA
Sbjct: 469 SPFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLA 525
>gi|359488682|ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
[Vitis vinifera]
Length = 863
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 242/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P+P ++ PE++R V G+ P+PIQ + P+ LQ RD++
Sbjct: 145 YRRRHEITVTGDDVPQPFTSFESTGFPPEIIREVYSAGFSAPTPIQAQSWPVALQSRDIV 204
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R+ N GP +V++PTRELA QI++E VKF
Sbjct: 205 AIAKTGSGKTLGYLIPGFIHLKRI----RNNPQMGPTVLVLSPTRELATQIQDEAVKFGR 260
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ + GG Q + +G ++V+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 261 SSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRRVSLRQVSYLVLDEADR 320
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P+ R T M++AT P V ++A L
Sbjct: 321 MLDMGFEPQIRKIVKEVPAR-----------------RQTLMYTATWPKEVRKIAADLLV 363
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NPV V IG + A + I+Q+V ++ EK RL+++L E G K I+F +TKK D
Sbjct: 364 NPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKI-IIFCSTKKMCD 422
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ +R+ L FRT R VLVATDVA RG+DI D+ VIN
Sbjct: 423 QLARNLTRP-FGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVIN 481
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TGVA TF D DL ++L +N VPPE+
Sbjct: 482 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEI 537
>gi|225441549|ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
vinifera]
Length = 622
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 251/424 (59%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +AE L L + + R Y P+P+Q AIP+ L +D++
Sbjct: 147 EDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLSGKDLMAC 206
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + P A++++PTREL+ QI +E KF++
Sbjct: 207 AQTGSGKTAAFCFPIISGIMTGQFAQRPRGARTVYPLALILSPTRELSCQIHDEARKFSY 266
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEADR
Sbjct: 267 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 326
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 327 MLDMGFEPQIRKIVEQM---DMPPPG----------VRQTMLFSATFPKEIQRLASDFLS 373
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA-------IVFVNTKK 525
+ + + +G G +T+LI Q V + ES+K S L LL A +VFV TKK
Sbjct: 374 SYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGAHGKQSLTLVFVETKK 433
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ TT+HG ++Q++RE +L F++ +LVATDVA RG+DIP VAH
Sbjct: 434 GADSLEHWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATDVAARGLDIPHVAH 493
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGKTG+AT F +++ + L ++ ++N VP L
Sbjct: 494 VVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADLMQEANQEVPAWLT 553
Query: 646 KHEA 649
++ +
Sbjct: 554 RYAS 557
>gi|194752113|ref|XP_001958367.1| GF10884 [Drosophila ananassae]
gi|190625649|gb|EDV41173.1| GF10884 [Drosophila ananassae]
Length = 822
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 249/423 (58%), Gaps = 24/423 (5%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
T+ + F + I+ KG ++P P + EG ++ + + G+ P+ IQ P+
Sbjct: 126 TQGETDTFLANNEITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIA 185
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
+ RD++G+A+TGSGKT A+VLP + +I+ P + +GP A+V+APTRELAQQI++
Sbjct: 186 MSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLER---GDGPIALVLAPTRELAQQIQQ 242
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
++F ++ I GG +Q + +G E+VIATPGRLID LER L +C Y+
Sbjct: 243 VAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYL 302
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ ++P+ R M+SAT P V +
Sbjct: 303 VLDEADRMLDMGFEPQIRKIMQ-----QIRPD------------RQVLMWSATWPKEVRQ 345
Query: 466 LARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFV 521
LA ++L N + V IG+ A I Q V + E+EK +L +LL ++ + I+FV
Sbjct: 346 LAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLVKLLTDISAENETKTIIFV 405
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK D + +N+ + G+R +HG KSQ++R+ L FR R+++LVATDVA RG+D+
Sbjct: 406 ETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVD 465
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
DV VINYD P N E Y HRIGRTGR+ G A T T + + DL Q+L ++N +
Sbjct: 466 DVKFVINYDYPSNSEDYVHRIGRTGRSNNRGTAYTLFTHSNANKANDLIQVLREANQTIN 525
Query: 642 PEL 644
P+L
Sbjct: 526 PKL 528
>gi|360044201|emb|CCD81748.1| unnamed protein product [Schistosoma mansoni]
Length = 1328
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/441 (38%), Positives = 255/441 (57%), Gaps = 25/441 (5%)
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVE 267
F R + + +L +M++ D + +R NI +G + P+P+RNW + ++ LL ++
Sbjct: 591 FPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGRECPKPLRNWVQAGISSRLLACLK 650
Query: 268 RVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG 327
R + P+PIQ A+P+ + RD+IGIA+TGSGKT AF++P++ ++ P+ N +G
Sbjct: 651 RNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQAPL---NPGDG 707
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGR 387
P A+++APTRELA QI +ET K + V + GG I EQ +++G E+++ TPGR
Sbjct: 708 PIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGISEQIAELKRGAEIIVCTPGR 767
Query: 388 LIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 444
+ID L R L++C+YVVLDEADRM D+GFEPQV+ +++ N +P+
Sbjct: 768 MIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRIIE-----NCRPD------- 815
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
R T MFSAT P +E LARK L P+ + IG + QH ++ E EK +
Sbjct: 816 -----RQTLMFSATFPRQMEILARKVLTLPIEIQIGGRSVVCSDVEQHAFILSEEEKVYK 870
Query: 505 LQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+ LL ++ + +VFV +++AD + + L K GY +LHGG Q R+ + F+
Sbjct: 871 VLELLGIYQEEGSVLVFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVIMDFKRG 930
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
+L+AT VA RG+D+ D+ VINYD P + E Y HR GRTGRAG+ G A TFLT
Sbjct: 931 NIRLLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQE 990
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
D+ + QS P EL
Sbjct: 991 RSAGDVVRAFKQSGQKPPEEL 1011
>gi|41282082|ref|NP_571016.2| pl10 [Danio rerio]
gi|37590512|gb|AAH59794.1| Pl10 [Danio rerio]
Length = 688
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 254/427 (59%), Gaps = 32/427 (7%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G P+P+ + + ++ ++ + Y P+P+Q AIP+ +RD++
Sbjct: 192 DDIPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMAC 251
Query: 295 AETGSGKTAAFVLPMLTYISRLPP---------ISEENEAEG-----PYAVVMAPTRELA 340
A+TGSGKTAAF+LP+L+ I P ++EN G P ++V+APTRELA
Sbjct: 252 AQTGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELA 311
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI +E KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+
Sbjct: 312 LQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLLDMMERGKIGLD 371
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
CNY+VLDEADRM+DMGFEPQ+ ++ D MP L R T MFSAT
Sbjct: 372 YCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGL---------------RQTMMFSAT 416
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTA 517
P ++ LAR +L + + + +G G +E I+Q VV ++E++K S L LL+ G D
Sbjct: 417 FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLT 476
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VFV TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG
Sbjct: 477 LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG 536
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++
Sbjct: 537 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAK 596
Query: 638 SPVPPEL 644
VP L
Sbjct: 597 QEVPSWL 603
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 258/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 153 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 212
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 213 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 269
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 270 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 329
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 330 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 372
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 373 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 432
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 433 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 492
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 493 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 552
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 553 GTAVPPDLEK 562
>gi|255089378|ref|XP_002506611.1| predicted protein [Micromonas sp. RCC299]
gi|226521883|gb|ACO67869.1| predicted protein [Micromonas sp. RCC299]
Length = 639
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/412 (39%), Positives = 254/412 (61%), Gaps = 16/412 (3%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G P P++ +A+ + R ++R +KNP+P+Q AIP+ L++RD++
Sbjct: 169 EDIPVETSGHDCPEPIKLFADIDFGAAINRNIQRCKFKNPTPVQKYAIPISLKRRDLMAC 228
Query: 295 AETGSGKTAAFVLPML-TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHY 353
A+TGSGKTAAF P++ I R P A+V++PTRELA QI EE+ KFA+
Sbjct: 229 AQTGSGKTAAFCFPIIHGIIDRGLQAPRGGRKTFPIALVLSPTRELAIQIHEESRKFAYQ 288
Query: 354 LGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRM 413
G+ V + GG +Q + +GC+++IATPGRLID ++R L + Y+ LDEADRM
Sbjct: 289 TGVASVVVYGGAPAAQQFREMERGCDMLIATPGRLIDLVDRAKISLERIQYLALDEADRM 348
Query: 414 IDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRN 473
+DMGFEPQ+ +++ + P + R T +FSAT P ++R+A +L++
Sbjct: 349 LDMGFEPQIRQIVE---QRGMPPPGD----------RQTMLFSATFPKEIQRMASDFLQD 395
Query: 474 PVVVTIGTAGKATELISQHVVMMKE-SEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAK 532
+ +T+G G + LI+Q + ++ ++K L L+ + T +VFV TK+ AD +
Sbjct: 396 YIFLTVGRVGSSHTLITQTIEYVQSYNDKCQMLMDLVHAVQGLT-LVFVETKRGADQLED 454
Query: 533 NLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMP 592
L + G+ T++HG ++Q++RE +L+ FR+ + +LVATDVA RG+DIP V HVIN+D+P
Sbjct: 455 WLSQQGFPSTSIHGDRTQQEREWALKSFRSGKTPILVATDVAARGLDIPHVTHVINFDLP 514
Query: 593 GNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+++ Y HRIGRTGRAGK G+AT F T D+ + L ++L ++N VP L
Sbjct: 515 SDVDDYVHRIGRTGRAGKKGLATAFFTDKDSSLARGLVEILSEANQDVPSFL 566
>gi|356500387|ref|XP_003519013.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
max]
Length = 611
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/445 (39%), Positives = 264/445 (59%), Gaps = 26/445 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D+ +SE +E T ++ + +D + G +P P+ ++AE L L + ++R Y
Sbjct: 123 DQSFSE---QENTGINFEAY-DDIPVETSGENVPLPVNSFAEIDLGVALNQNIQRCKYVK 178
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAV 331
P+P+Q AIP+ L RD++ A+TGSGKTAAF P+++ I R A P A+
Sbjct: 179 PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYAQRPRVARTAYPLAL 238
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
+++PTREL+ QI +E KF++ G+KVV GG I +Q + +G ++++ATPGRL+D
Sbjct: 239 ILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDL 298
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
LER L Y+ LDEADRM+DMGFEPQ+ +++ M ++ P R
Sbjct: 299 LERARLSLQMIRYLALDEADRMLDMGFEPQIRKIVEQM---DMPPPG----------MRQ 345
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD- 510
T +FSAT P ++ LA +L V + +G G +T+LI+Q V + ES+K S L LL
Sbjct: 346 TLLFSATFPKEIQALASDFLSRYVFLAVGRVGSSTDLIAQRVEYVLESDKRSHLMDLLHA 405
Query: 511 --ELG----DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
E G +VFV TKK AD + L G+ ++HG ++Q++RE++L F+T
Sbjct: 406 QRETGVNGKQGLTLVFVETKKGADALEHCLCVNGFPAASIHGDRTQQERELALRSFKTGN 465
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+LVATDVA RG+DIP VAHV+N+D+P +I+ Y HRIGRTGRAGK G+AT F + +
Sbjct: 466 TPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNFN 525
Query: 625 VFYDLKQMLIQSNSPVPPELAKHEA 649
+ L ++ ++N VP L+++ A
Sbjct: 526 MAKPLADLMQEANQEVPAWLSRYAA 550
>gi|320590111|gb|EFX02556.1| dead deah box RNA helicase [Grosmannia clavigera kw1407]
Length = 1178
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/501 (37%), Positives = 279/501 (55%), Gaps = 40/501 (7%)
Query: 162 RREQKKLAAKNEKEMREE----IRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD--- 214
RR+ KK AA+ E ++ + + G++ K A A K K++ D M +
Sbjct: 439 RRKVKKPAAEPEAYFSDDDDYFSKAQNGIDTKSILAMATKRKKKDIPTIDYSKMELTPIR 498
Query: 215 -RHWSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
W E +L E+TE + R D + I G +P+P++ W+ LT +L +E++GY
Sbjct: 499 KNFWVEPHELSELTEAEVAELRLDLDGIKVSGKDVPKPVQKWSHCGLTRPMLEVIEQLGY 558
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
P+ IQM A+P+ + RDVIG+A+TGSGKT AF++PM +I E +GP +
Sbjct: 559 DKPTAIQMQALPVIMSGRDVIGVAKTGSGKTMAFLVPMFRHIMD----QERVRDDGPIGL 614
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++ PTRELA QI + FA LG++ V GG I++Q +++G E+V+AT GR+ID
Sbjct: 615 ILTPTRELAVQIHRDCKPFAKKLGLRAVCAYGGPPIKDQIAELKRGAEIVVATTGRMIDL 674
Query: 392 L---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI 448
L + R L + Y+VLDEADRM DMGFEPQV+ + +N++P+
Sbjct: 675 LAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIF-----ANIRPD----------- 718
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR- 507
R T +FSATMP ++ L +K L +PV +T+G I+Q V + E +KF RL
Sbjct: 719 -RQTLLFSATMPRIIDALVKKVLHSPVEITVGGKSVVAPEITQMVEVRDEKDKFLRLLEL 777
Query: 508 ----LLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTK 563
+D+ D A++FV ++ AD + + L + GY +LHGGK Q R+ ++ F+
Sbjct: 778 LGELYMDD-DDVRALIFVERQEKADELLRELLRKGYACMSLHGGKDQSDRDSTISDFKKG 836
Query: 564 RYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
VLVAT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T
Sbjct: 837 VCPVLVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEEQE 896
Query: 624 DVFYDLKQMLIQSNSPVPPEL 644
+ + + L QS PVP L
Sbjct: 897 NCAPGIAKALEQSGQPVPERL 917
>gi|359488684|ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
[Vitis vinifera]
Length = 828
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 242/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P+P ++ PE++R V G+ P+PIQ + P+ LQ RD++
Sbjct: 145 YRRRHEITVTGDDVPQPFTSFESTGFPPEIIREVYSAGFSAPTPIQAQSWPVALQSRDIV 204
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R+ N GP +V++PTRELA QI++E VKF
Sbjct: 205 AIAKTGSGKTLGYLIPGFIHLKRI----RNNPQMGPTVLVLSPTRELATQIQDEAVKFGR 260
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ + GG Q + +G ++V+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 261 SSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPGRLNDILEMRRVSLRQVSYLVLDEADR 320
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P+ R T M++AT P V ++A L
Sbjct: 321 MLDMGFEPQIRKIVKEVPAR-----------------RQTLMYTATWPKEVRKIAADLLV 363
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NPV V IG + A + I+Q+V ++ EK RL+++L E G K I+F +TKK D
Sbjct: 364 NPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKI-IIFCSTKKMCD 422
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ +R+ L FRT R VLVATDVA RG+DI D+ VIN
Sbjct: 423 QLARNLTRP-FGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDIRVVIN 481
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TGVA TF D DL ++L +N VPPE+
Sbjct: 482 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVPPEI 537
>gi|238879720|gb|EEQ43358.1| hypothetical protein CAWG_01593 [Candida albicans WO-1]
Length = 562
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/431 (39%), Positives = 251/431 (58%), Gaps = 32/431 (7%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
++RD FR++ ++ KG IP P+ + E +L+ V+ G+ P+PIQ P+
Sbjct: 103 SDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMA 162
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD+IGIA TGSGKT ++ LP + +I+ P + +GP +V+APTREL QI+
Sbjct: 163 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQL---QYGDGPIVLVLAPTRELTVQIQT 219
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KF I+ + GG Q + +G E+ IATPGRLID LE L + Y+
Sbjct: 220 ECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYL 279
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++D ++P+ R T M+SAT P V++
Sbjct: 280 VLDEADRMLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQQ 322
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFSRLQRLLDEL------GDKTA 517
L R YL +P+ VTIG+ EL + H + +++ ++FS+ RL+ L D
Sbjct: 323 LTRDYLNDPIQVTIGS----LELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKI 378
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VF +TK+ D + L G+ +HG K Q +R+ L+ FR + +++VATDVA RG
Sbjct: 379 LVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARG 438
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
ID+ + HVINYDMPGNIE Y HRIGRTGR G +G A +F T ++ + DL +++ ++N
Sbjct: 439 IDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREAN 498
Query: 638 SPVPPELAKHE 648
VPPEL + +
Sbjct: 499 QTVPPELQRFD 509
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 256/429 (59%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ MT + +R+ + G +P+P++ W + LT ++L ++++ Y+ P PIQ
Sbjct: 441 KEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQA 500
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML +I P+ +GP ++MAPTREL
Sbjct: 501 QALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVP---GDGPIGLIMAPTREL 557
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QQI + KF+ +G++ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 558 VQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKI 617
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 618 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPD------------RQTVLFS 660
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV V +G + I+Q V + E+E+F RL LL E +K
Sbjct: 661 ATFPRQVEILARKVLNKPVEVQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEKG 720
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I +FV++++ D + ++L K GY +LHG K Q RE ++ F++ N+L+AT +A
Sbjct: 721 KILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAA 780
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ VIN+D+P + E Y HR+GRTGRAG+ G A TF+ D+ DL + L
Sbjct: 781 RGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALEL 840
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 841 SEQVVPDDL 849
>gi|387018190|gb|AFJ51213.1| ATP-dependent RNA helicase DDX3X-like isoform 3 [Crotalus
adamanteus]
Length = 710
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 208 DDIPVEATGNNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMAC 267
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 268 AQTGSGKTAAFLLPILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 327
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 328 EEARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 387
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 388 LVLDEADRMLDMGFEPQIRRIVEQDTMPLKGV---------------RQTMMFSATFPKE 432
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 433 IQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 492
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG+DI
Sbjct: 493 ETKKGADSLEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRSPILVATAVAARGLDIS 552
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 553 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 612
Query: 642 PEL 644
L
Sbjct: 613 SWL 615
>gi|395815581|ref|XP_003781304.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Otolemur garnettii]
Length = 872
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/430 (40%), Positives = 259/430 (60%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 183 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 242
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + S E E EGP AV+M PTREL
Sbjct: 243 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI--MDQWSSE-EGEGPIAVIMTPTRELT 299
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 300 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 359
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 360 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 402
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 403 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 462
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 463 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 522
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 523 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 582
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 583 GTAVPPDLEK 592
>gi|56784388|dbj|BAD82427.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
gi|56785381|dbj|BAD82339.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
gi|222619731|gb|EEE55863.1| hypothetical protein OsJ_04500 [Oryza sativa Japonica Group]
Length = 571
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 256/425 (60%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ M++ D +R +I+ +G +P+P+R + E ++A+ + G+ P+PIQ
Sbjct: 127 VQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQG 186
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIA+TGSGKT +++LP L ++ P + + +GP +++APTRELA
Sbjct: 187 WPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRL---EQGDGPIVLILAPTRELAV 243
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI++E+ KF Y + I GG Q +R+G E+VIATPGRLID LE + L +
Sbjct: 244 QIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRR 303
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T +SAT P
Sbjct: 304 VTYLVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLYWSATWPR 346
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++L+NP V IG+ KA I Q + ++ E EK+ RL +LL +L D + I +
Sbjct: 347 EVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILI 406
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
F TKK+ D V + L G+ ++HG K+Q +R+ L F++ + ++ ATDVA RG+D
Sbjct: 407 FFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLD 466
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ VIN+D P +E Y HRIGRTGRAG +G A TF T + +L ++L ++
Sbjct: 467 VKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQV 526
Query: 640 VPPEL 644
V P L
Sbjct: 527 VNPAL 531
>gi|242009038|ref|XP_002425300.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212509065|gb|EEB12562.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 1014
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/403 (41%), Positives = 248/403 (61%), Gaps = 25/403 (6%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ +MT + +RED I KG P+P++ WA+ ++ ++L +++ G++ P+PIQ
Sbjct: 318 IAKMTNEEVEKYREDLEGIRVKGKGCPKPIKEWAQCGVSKKVLEILKKNGFEKPTPIQTQ 377
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I PP+ E +GP A++M PTREL
Sbjct: 378 AIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEE---TDGPIAIIMTPTRELC 434
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI ++ KF+ + +KVV + GG I EQ +++G ++V+ TPGR+ID L R
Sbjct: 435 MQIGKDCKKFSKSVSLKVVCVYGGTGISEQIAELKRGADIVVCTPGRMIDMLAANSGRVT 494
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 495 NLLRVTYIVLDEADRMFDMGFEPQVMRIID-----NVRPD------------RQTVMFSA 537
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P +E LAR+ L P+ V +G + + QHVV++ E +KF +L LL ++ +
Sbjct: 538 TFPRQMEALARRILTKPIEVQVGGRSVVCKDVEQHVVVLDEDKKFLKLLELLGIYQNQGS 597
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
IVFV+ +++AD + K L K Y +LHGG Q R+ ++ F++ + +L+AT VA R
Sbjct: 598 VIVFVDKQESADDLLKELMKASYPSMSLHGGIDQFDRDSTIIDFKSGKVKLLIATSVAAR 657
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
G+D+ + V+NYD P + E Y HR GRTGRAG GVA TF+T
Sbjct: 658 GLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGVAYTFIT 700
>gi|384950042|gb|AFI38626.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
Length = 659
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 163 DDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|380491708|emb|CCF35128.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 1206
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/470 (37%), Positives = 260/470 (55%), Gaps = 35/470 (7%)
Query: 190 PEEAAALKLKEEAADLYDTFDMRVDRH------WSE-KKLEEMTERDWRIFREDFN-ISY 241
P A+ K + D+ ++D H W E +L +TE + R + + I
Sbjct: 514 PNAVLAMAAKRKKKDIPTVDYSKLDLHPIRKNFWVEPAELAALTEEEANELRLELDGIKV 573
Query: 242 KGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGK 301
G IP+P++ WA+ LT L + +G+ P+ IQM A+P+ + RDV+G+A+TGSGK
Sbjct: 574 SGKNIPKPVQKWAQCGLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVGVAKTGSGK 633
Query: 302 TAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
T AF+LPM +I PP+ + +GP ++M PTRELA QI + F +G++ V
Sbjct: 634 TLAFLLPMFRHIMDQPPL---KDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCA 690
Query: 362 VGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGF 418
GG I +Q +++G E+V+ TPGR+ID L + R L + Y VLDEADRM DMGF
Sbjct: 691 YGGAPIRDQIAELKRGAEIVVCTPGRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGF 750
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQV+ + +N++P+ R T +FSATMP ++ L +K L++PV +T
Sbjct: 751 EPQVMKIF-----ANIRPD------------RQTILFSATMPRIIDSLTKKVLKSPVEIT 793
Query: 479 IGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMVAKNL 534
+G I+Q V ++ E +KF L LL EL DK +++FV ++ AD + K L
Sbjct: 794 VGGRSVVASDITQVVEIVPEDQKFYHLLGLLGELYDKDEDARSLIFVERQEKADDLLKEL 853
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
GY ++HGGK Q R+ ++ F+ +L+AT VA RG+D+ + V+N+D P +
Sbjct: 854 MTKGYPCMSIHGGKDQVDRDSTISDFKKGIVPILIATSVAARGLDVKQLKLVVNFDCPSH 913
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HR GRTGRAG G A T++T + + L QS PVP L
Sbjct: 914 SEDYVHRCGRTGRAGNKGTAVTYITEEQESCASAVAKALEQSGQPVPERL 963
>gi|302835930|ref|XP_002949526.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
gi|300265353|gb|EFJ49545.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
Length = 722
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/411 (40%), Positives = 244/411 (59%), Gaps = 24/411 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I +G IP P+R W + L+ LL +++ G+ P PIQ A+P+ + RD IGIA+T
Sbjct: 60 GIKVRGKDIPAPVRAWTQAGLSSRLLEVLKKRGFDRPLPIQAQALPIIMSGRDCIGIAKT 119
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AFVLPM+ +I PP+ + +GP ++V+APTREL QI +E F LG+
Sbjct: 120 GSGKTMAFVLPMMRHIKDQPPL---QQGDGPVSLVIAPTRELVAQIAKEAKAFGKPLGLN 176
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
+++ GG + Q +++G E+V TPGR+ID L + L + Y+VLDEADRM
Sbjct: 177 ALAVFGGSGVANQISELKRGVEIVACTPGRMIDLLVTSNGKITNLRRVTYLVLDEADRMF 236
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ ++ N++P+ R T MFSAT P VE LARK L +P
Sbjct: 237 DMGFEPQITRIV-----QNIRPD------------RQTVMFSATFPRQVEVLARKILTDP 279
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT-AIVFVNTKKNADMVAKN 533
V + +G E I+Q V + E E+F RL +L E ++ ++FV+ +++ D + ++
Sbjct: 280 VEIQVGGRSIVNENITQFVEIRPEKERFHRLLEILGEWYERGKLLIFVDKQESCDNLFRD 339
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L + GY +LHGGK Q RE ++ F+ N+LVAT +A RG+D+ D+ V+NYD+P
Sbjct: 340 LLRYGYPCLSLHGGKDQSDRESTIADFKGAVCNILVATSIAARGLDVKDLVLVVNYDVPN 399
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ E Y HR+GRTGRAG G A TF+ + DL + L +S + +P +L
Sbjct: 400 HHEDYVHRVGRTGRAGAKGTAITFIGPDEERYAPDLVKALRESGAAIPQDL 450
>gi|390351458|ref|XP_796437.3| PREDICTED: probable ATP-dependent RNA helicase DDX41
[Strongylocentrotus purpuratus]
Length = 620
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 242/422 (57%), Gaps = 33/422 (7%)
Query: 234 REDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIG 293
R+ +I +G IP P++++ E K ++ +++ G P+PIQ+ +P+ L+ RD+IG
Sbjct: 162 RKKLHILVEGHDIPPPIKHFKEMKFPKSIIYGLKKKGITKPTPIQIQGLPVILEGRDMIG 221
Query: 294 IAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
IA TGSGKT F LP++ + R+P I E GPY +++ P+RELA+Q + +
Sbjct: 222 IAFTGSGKTLVFSLPIVMFALEQEKRMPFIKNE----GPYGLIICPSRELARQTHDGIMH 277
Query: 350 FAHYL------GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCN 403
F L ++ + +GG S++EQ +R G +V+ATPGRLID L ++ L+ C
Sbjct: 278 FIKCLEADNQPTLRSMLCIGGVSVKEQMDAVRSGVHIVVATPGRLIDMLNKKCFTLSVCR 337
Query: 404 YVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
Y+ LDEADRMID+GFE + +L S R T +FSATMP +
Sbjct: 338 YLCLDEADRMIDLGFEEDIRTILTYFKSQ-----------------RQTLLFSATMPKKI 380
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNT 523
+ A+ L PV V +G AG A+ + Q V +K+ K L L + ++F
Sbjct: 381 QNFAKSALVRPVTVNVGRAGAASLDVIQEVEYVKQEAKMVYLLECLQK-APPPVLIFAEK 439
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K + D + + L G +HGGK QE+R S+E FR + +VLVATDVA +G+D PD+
Sbjct: 440 KADVDDIHEYLLLKGVEAVAIHGGKDQEERTKSIEQFRAREKDVLVATDVASKGLDFPDI 499
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPP 642
HVINYDMP +IE Y HRIGRTGR GKTG+ATTF+ D V DLK +LI++ +PP
Sbjct: 500 QHVINYDMPEDIENYVHRIGRTGRCGKTGIATTFINKACDESVLRDLKHLLIEAKQKLPP 559
Query: 643 EL 644
L
Sbjct: 560 VL 561
>gi|121701983|ref|XP_001269256.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359917|sp|A1CQA9.1|PRP5_ASPCL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119397399|gb|EAW07830.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 1192
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 249/430 (57%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MT+ + R + + I +G +P+P++ W++ L + L +ER+GY++P+ IQ
Sbjct: 527 LAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQALDVIERLGYESPTSIQSQ 586
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ + EGP ++M PTRELA
Sbjct: 587 AIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPL---DNMEGPIGLIMTPTRELA 643
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+V+ TPGR+ID L R
Sbjct: 644 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDLLAANAGRVT 703
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ +N++P+ R T +FSA
Sbjct: 704 NLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD------------RQTVLFSA 746
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L P+ + +G I+Q V + E KF RL +L L
Sbjct: 747 TFPRNMEALARKALTKPIEIIVGGRSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDA 806
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D +++FV ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 807 NEDARSLIFVERQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 866
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 867 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 926
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 927 ALKQSGQQVP 936
>gi|414879082|tpg|DAA56213.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 571
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/426 (39%), Positives = 256/426 (60%), Gaps = 22/426 (5%)
Query: 221 KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
++ M+E D +R +I+ +G +P+P+R + E ++A+ + G+ P+PIQ
Sbjct: 123 SVQAMSEADVAQYRRLRDITIEGRDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQ 182
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
P+ L+ RD+IGIA+TGSGKT +++LP L ++ P + + +GP +++APTRELA
Sbjct: 183 GWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVGAQPRL---EQGDGPIVLILAPTRELA 239
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI+EE+ KF Y + + GG Q +R+G E+VIATPGRLID LE + L
Sbjct: 240 VQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEAGHTNLR 299
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ Y+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T +SAT P
Sbjct: 300 RVTYLVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLYWSATWP 342
Query: 461 PAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI- 518
VE LAR++L+NP V IG+ KA I Q V ++ + EK+ RL +LL +L D + I
Sbjct: 343 REVEALARQFLQNPYKVIIGSPELKANHSIQQIVEVISDHEKYPRLSKLLSDLMDGSRIL 402
Query: 519 VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGI 578
+F TKK+ D + + L G+ ++HG K+Q +R+ L F++ + ++ ATDVA RG+
Sbjct: 403 IFFQTKKDCDKITRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 462
Query: 579 DIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNS 638
D+ D+ VINYD P +E Y HRIGRTGRAG +G A TF T + +L ++L ++
Sbjct: 463 DVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTHANAKFSRNLVKILREAGQ 522
Query: 639 PVPPEL 644
V P L
Sbjct: 523 VVNPAL 528
>gi|114764595|ref|ZP_01443799.1| ATP-dependent RNA helicase RhlE [Pelagibaca bermudensis HTCC2601]
gi|114542971|gb|EAU45991.1| ATP-dependent RNA helicase RhlE [Roseovarius sp. HTCC2601]
Length = 502
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/393 (41%), Positives = 233/393 (59%), Gaps = 31/393 (7%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
M +++ L P++L+A+E GY+ P+PIQ AIP L+ +DV+GIA+TG+GKTA+F LPM
Sbjct: 1 MTKFSDLNLNPKVLKAIEEAGYETPTPIQAGAIPHALEGKDVLGIAQTGTGKTASFTLPM 60
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+T ++R A P ++V+ PTRELA Q+ E +A Y+ + ++GG S +E
Sbjct: 61 ITSLAR-----GRARARMPRSLVLCPTRELAAQVAENFDTYAKYVKLTKALLIGGVSFKE 115
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+IATPGRL+D ER +L +V+DEADRM+DMGF P + +
Sbjct: 116 QEQLIDKGVDVLIATPGRLLDHFERGKLILTDVKVMVVDEADRMLDMGFIPDIERIFSLT 175
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T FSATM P +ER+ +L NP + + A+E I
Sbjct: 176 P-----------------FTRQTLFFSATMAPEIERITNTFLSNPERIEVARQATASETI 218
Query: 490 SQHVVMMKES-------EKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYR 540
Q V K S EK + L++L+D G+K AIVF N K + D+VAK+L K GY
Sbjct: 219 EQGAVFFKGSRKDREGSEKRTVLRQLIDREGEKCTNAIVFCNRKVDVDIVAKSLKKYGYN 278
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +LEGFR +L+A+DVA RG+D+P V+HV N+D+PG+ E Y H
Sbjct: 279 AEPIHGDLDQSQRTRTLEGFREGSIRLLIASDVAARGLDVPSVSHVFNFDVPGHAEDYVH 338
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
RIGRTGRAG+ G A T + D F D++++L
Sbjct: 339 RIGRTGRAGREGKAFTIVVPRDEKNFEDVEKLL 371
>gi|380810154|gb|AFE76952.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
Length = 661
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 163 DDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 341 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 400
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 401 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 457
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 458 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 517
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 518 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 560
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 561 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 620
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 621 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 680
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 681 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 740
Query: 637 NSPVPPELAK 646
+ VP +L K
Sbjct: 741 GTAVPSDLEK 750
>gi|222640112|gb|EEE68244.1| hypothetical protein OsJ_26445 [Oryza sativa Japonica Group]
Length = 2897
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/416 (40%), Positives = 248/416 (59%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R+ ++ G +P P + PE+L+ + G+ NP+PIQ P+ LQ RD++
Sbjct: 585 YRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIV 644
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R + N GP +V+APTRELA QI++E VKF
Sbjct: 645 AIAKTGSGKTLGYLIPAFIHLRRY----QNNPMLGPTVLVLAPTRELASQIQDEAVKFGR 700
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ + GG S Q + +G ++V+ATPGRL D LE R L+Q +++VLDEADR
Sbjct: 701 SSRVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRKISLHQVSFLVLDEADR 760
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D +P + R T M++AT P V ++A L+
Sbjct: 761 MLDMGFEPQIRKIVDEIPRN-----------------RQTLMYTATWPKEVTKIAGDLLK 803
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
+PV V IG+ + A + I+Q+V ++ +K RL+++L E G K I+F +TKK D
Sbjct: 804 DPVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKV-IIFCSTKKMCD 862
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+++ + + ++HG KSQ +R+ L FRT R +LVATDVA RG+DI D+ VIN
Sbjct: 863 QLARDIGR-SFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVIN 921
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P IE Y HRIGRTGRAG TGV+ TF + D DL ++L +N VPPEL
Sbjct: 922 YDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVKVLEGANQHVPPEL 977
>gi|383416201|gb|AFH31314.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
Length = 661
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 163 DDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLDRGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|431898763|gb|ELK07135.1| ATP-dependent RNA helicase DDX3X [Pteropus alecto]
Length = 661
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 255/423 (60%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + + L + GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEEFLYREGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNVNITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|321459317|gb|EFX70372.1| hypothetical protein DAPPUDRAFT_328137 [Daphnia pulex]
Length = 738
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 261/436 (59%), Gaps = 42/436 (9%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRA-VERVGYKNPSPIQMAAIPLGLQQRDVIG 293
ED + G+ +P + + + KLT E++R+ + Y P+P+Q AIP+ L +RDV+
Sbjct: 205 EDIPVEATGNDVPAHINTFEDVKLT-EIIRSNIALTRYDKPTPVQKYAIPIILARRDVMA 263
Query: 294 IAETGSGKTAAFVLPMLTYISRLPPISEENEAE--------GPYAVVMAPTRELAQQIEE 345
A+TGSGKTAAF++P+L + P+ ++ + P A+V+APTRELA QI +
Sbjct: 264 CAQTGSGKTAAFLVPILNQLFERGPVVNQSAGQRSYGRRKQYPLALVLAPTRELATQIYD 323
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KFA+ ++ + GG + +Q + +GC +++ATPGRL+D LER L CN++
Sbjct: 324 EAKKFAYRSRVRPCVVYGGADVRQQMQDLERGCHLLVATPGRLVDMLERGKIGLEHCNFL 383
Query: 406 VLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P +
Sbjct: 384 VLDEADRMLDMGFEPQIRRIVEQDTMPKTGD---------------RQTLMFSATFPKEI 428
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG---------- 513
+ LAR +L N + + +G G +E I+Q +V ++E +K S L LL+ G
Sbjct: 429 QMLARDFLENYIFLAVGRVGSTSENITQKIVWVEEHDKRSFLLDLLNASGLNKFNSQVET 488
Query: 514 -----DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVL 568
++ +VFV TK+ AD + + L + GY VT++HG +SQ +RE +L+ FR+ + +L
Sbjct: 489 ESTEHEQLTLVFVETKRGADALEEFLYRDGYPVTSIHGDRSQREREDALKRFRSGKTPIL 548
Query: 569 VATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYD 628
VAT VA RG+DIP V HVIN+D+P ++E Y HRIGRTGR G GVAT+F + ++ D
Sbjct: 549 VATAVAARGLDIPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNLIRD 608
Query: 629 LKQMLIQSNSPVPPEL 644
L +++I++ +P L
Sbjct: 609 LVELIIETKQELPSWL 624
>gi|237845101|ref|XP_002371848.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211969512|gb|EEB04708.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221501473|gb|EEE27248.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 657
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 240/448 (53%), Gaps = 32/448 (7%)
Query: 208 TFDMRVDRHWS-EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ R+ W K EMT + RE F I G P P RN+ + + +L+ +
Sbjct: 164 VYTSRMQSSWRLPDKYAEMTLAEANEVRERFFIDVSGEDPPPPFRNFKDMRFPQPILKGL 223
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
+ G P+ IQM IP LQ RD+IGIA TGSGKT F LPM+ S E
Sbjct: 224 QERGISYPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIMGALESEIRSPYLPGE 283
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAH------YLGIKVVSIVGGQSIEEQGFRIRQGCEV 380
GP+ +V+ P+RELA Q + F Y ++ V I+GG S EQ +RQG
Sbjct: 284 GPFGLVVCPSRELASQTNDVCSFFCKKLEDGGYPALRCVCIIGGCSAVEQAKEVRQGVHC 343
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
++ATPGRL D L +R L QC Y+ DEADRM+DMGFE +V VLD+
Sbjct: 344 IVATPGRLTDMLNKRRLALQQCEYLCFDEADRMVDMGFEEEVRNVLDSFGHQ-------- 395
Query: 441 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
R T +FSATMP ++ A+ L +P+VV +G AG A + Q V +K+
Sbjct: 396 ---------RQTLLFSATMPRKIQEFAKSALIDPLVVNVGRAGAANLDVVQEVEYVKQEN 446
Query: 501 KFSRLQRLLDELGDKTA---IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
K L L KTA ++F KK+ D + + L G +HGG +QE+R ++
Sbjct: 447 KLPYLLHCLQ----KTAPPVLIFCENKKDVDDIQEYLLLKGVDAAAVHGGLAQEERSEAV 502
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
FR R +VLV TDVA +G+D P + HVIN+DMP IE Y HRIGRTGR G+TGVATTF
Sbjct: 503 RAFREGRKDVLVGTDVASKGLDFPAIQHVINFDMPKEIENYVHRIGRTGRCGRTGVATTF 562
Query: 618 LTFHDTD-VFYDLKQMLIQSNSPVPPEL 644
+ + + V DLK +LI++ +PP L
Sbjct: 563 VNKNQEETVLLDLKALLIEAGQRMPPFL 590
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 341 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 400
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 401 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 457
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 458 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 517
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 518 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 560
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 561 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 620
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 621 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 680
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 681 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 740
Query: 637 NSPVPPELAK 646
+ VP +L K
Sbjct: 741 GTTVPSDLEK 750
>gi|255578793|ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1173
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 252/429 (58%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ M + +R+ + G +P+P++ W + L ++L ++++ Y+ P PIQ
Sbjct: 496 KEISRMAPEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLASKILETIKKLNYEKPMPIQA 555
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML +I P + +GP ++MAPTREL
Sbjct: 556 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPLVEA---GDGPIGLIMAPTREL 612
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RY 396
QQI + KFA LGI+ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 613 VQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKI 672
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 673 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPD------------RQTVLFS 715
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + ESE+F RL LL E +K
Sbjct: 716 ATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESERFLRLLELLGEWNEKG 775
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I +FV ++ D + ++L K GY +LHG K Q RE ++ F++ N+L+AT +A
Sbjct: 776 KILIFVQSQDKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAA 835
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ V+N+D+P + E Y HR+GRTGRAG+ G A TF++ D DL + L
Sbjct: 836 RGLDVKELDLVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAPDLVKALEL 895
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 896 SEQVVPEDL 904
>gi|330842567|ref|XP_003293247.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
gi|325076448|gb|EGC30233.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
Length = 551
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 259/425 (60%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ +TE R++ +I +GS + P+ ++ LL+A+ + P+PIQ A
Sbjct: 79 ITNLTEEKLFELRKELDIRIQGSDLVNPVTSFGHYGFENLLLQAISKQNIDTPTPIQKQA 138
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IP+ L RD+I IA+TGSGKTA F+ P + +I P + + +GP A+ +APTRELAQ
Sbjct: 139 IPIALSGRDLIAIAKTGSGKTATFIWPSIPHIMDQPYLEK---GDGPIALFLAPTRELAQ 195
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI ET+K++ Y ++ + GG S ++Q ++ GCE+V++TPGRLID ++ + LN+
Sbjct: 196 QIYLETLKYSKYFKLRTTVLYGGVSKQQQCKELKAGCEIVVSTPGRLIDMIKLKATKLNR 255
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEAD+M D GF PQV+ +++ +++P+ R T +FSAT
Sbjct: 256 VTYLVLDEADKMFDFGFGPQVLSIVN-----HVRPD------------RQTLLFSATFKQ 298
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRL-QRLLDELGDKTAIV 519
VE AR L +P+ ++IG AG A I+Q V ++K ESEK+S L L + L + ++
Sbjct: 299 NVEDFARSILTDPIKISIGQAGSANSDITQIVQVLKSESEKWSWLIDNLPNLLNQGSVLI 358
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ K + + ++KNL G++ ++HG K+Q +R +++ F+ + N+L+ATDVA RG+D
Sbjct: 359 FVSMKASVEELSKNLTNFGFKTCSIHGDKNQYERSQTIQTFKEGKVNILIATDVAARGLD 418
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
IP + +VIN+D +IE +THRIGRTGRAG G A T +T D + DL + L +N
Sbjct: 419 IPLIKNVINFDPSRDIESHTHRIGRTGRAGAKGDAYTLITPKDVNFAADLVKNLEGANQY 478
Query: 640 VPPEL 644
V +L
Sbjct: 479 VSSDL 483
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 343 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQ 402
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 403 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE---GEGPIAVIMTPTRELA 459
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 460 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 519
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 520 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 562
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 563 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 622
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 623 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 682
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 683 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 742
Query: 637 NSPVPPELAK 646
+ VP +L K
Sbjct: 743 GTAVPSDLEK 752
>gi|241958200|ref|XP_002421819.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645164|emb|CAX39763.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 557
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 253/431 (58%), Gaps = 32/431 (7%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
++RD FR++ ++ KG IP P+ + E +L+ V+ G+ P+ IQ P+
Sbjct: 92 SDRDIEAFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTAIQCQGWPMA 151
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD+IGIA TGSGKT ++ LP + +I+ P + +GP +V+APTRELA QI+
Sbjct: 152 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQL---QYGDGPIVLVLAPTRELAVQIQT 208
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KF I+ + GG Q + +G E+ IATPGRLID LE L + Y+
Sbjct: 209 ECAKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYL 268
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++D ++P+ R T M+SAT P V++
Sbjct: 269 VLDEADRMLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQQ 311
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFSRLQRLLDELG------DKTA 517
LAR YL +P+ VTIG+ EL + H + +++ ++FS+ RL+ L +
Sbjct: 312 LARDYLNDPIQVTIGS----LELAASHTITQLVEVIDEFSKRDRLVKHLESALNERENKI 367
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VF +TK+ D + L G+ +HG K Q +R+ L+ FR + +++VATDVA RG
Sbjct: 368 LVFASTKRTCDEITTYLRSDGWPALAIHGDKDQSERDWVLDEFRKGKTSIMVATDVAARG 427
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
ID+ + HVINYDMPGNIE Y HRIGRTGR G +G A +F T ++ + DL +++ +++
Sbjct: 428 IDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTDGNSKLGGDLCKIMREAH 487
Query: 638 SPVPPELAKHE 648
+PPEL +++
Sbjct: 488 QTIPPELQRYD 498
>gi|223590235|sp|A5DL80.3|DBP2_PICGU RecName: Full=ATP-dependent RNA helicase DBP2
Length = 554
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 257/431 (59%), Gaps = 24/431 (5%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
+E + + FR++ ++ G+ IP+P+ ++ E +L V++ G+ P+ IQ P+
Sbjct: 100 SESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMA 159
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L RD+IGIA TGSGKT ++ LP + +I+ P + +GP +V+APTRELA QI++
Sbjct: 160 LSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGP---GDGPIVLVLAPTRELAVQIQQ 216
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KF I+ I GG +Q + +G E+ IATPGRLID LE L + Y+
Sbjct: 217 ECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYL 276
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++D ++P+ R T M+SAT P V+
Sbjct: 277 VLDEADRMLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQT 319
Query: 466 LARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDE-LGDKTA--IVFV 521
L R YL +P+ VTIG+ A+ I+Q V ++ E EK RL + L+ DK A ++F
Sbjct: 320 LTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEAKVLIFS 379
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
+TK+ D + L G+ +HG K Q +R+ L F+T + ++VATDVA RGID+
Sbjct: 380 STKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVK 439
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+++VINYDMPGNIE Y HRIGRTGRAG TG A + T ++ + DL +++ ++N VP
Sbjct: 440 GISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKIMREANQTVP 499
Query: 642 PELAKHEASKF 652
PEL +++ F
Sbjct: 500 PELLRYDRRSF 510
>gi|221480806|gb|EEE19233.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 657
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 240/448 (53%), Gaps = 32/448 (7%)
Query: 208 TFDMRVDRHWS-EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ R+ W K EMT + RE F I G P P RN+ + + +L+ +
Sbjct: 164 VYTSRMQSSWRLPDKYAEMTLAEANEVRERFFIDVSGEDPPPPFRNFKDMRFPQPILKGL 223
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAE 326
+ G P+ IQM IP LQ RD+IGIA TGSGKT F LPM+ S E
Sbjct: 224 QERGISYPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIMGALESEIRSPYLPGE 283
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAH------YLGIKVVSIVGGQSIEEQGFRIRQGCEV 380
GP+ +V+ P+RELA Q + F Y ++ V I+GG S EQ +RQG
Sbjct: 284 GPFGLVVCPSRELASQTNDVCSFFCKKLEDGGYPALRCVCIIGGCSAVEQAKEVRQGVHC 343
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
++ATPGRL D L +R L QC Y+ DEADRM+DMGFE +V VLD+
Sbjct: 344 IVATPGRLTDMLNKRRLALQQCEYLCFDEADRMVDMGFEEEVRNVLDSFGHQ-------- 395
Query: 441 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
R T +FSATMP ++ A+ L +P+VV +G AG A + Q V +K+
Sbjct: 396 ---------RQTLLFSATMPRKIQEFAKSALIDPLVVNVGRAGAANLDVVQEVEYVKQEN 446
Query: 501 KFSRLQRLLDELGDKTA---IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
K L L KTA ++F KK+ D + + L G +HGG +QE+R ++
Sbjct: 447 KLPYLLHCLQ----KTAPPVLIFCENKKDVDDIQEYLLLKGVDAAAVHGGLAQEERSEAV 502
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
FR R +VLV TDVA +G+D P + HVIN+DMP IE Y HRIGRTGR G+TGVATTF
Sbjct: 503 RAFREGRKDVLVGTDVASKGLDFPAIQHVINFDMPKEIENYVHRIGRTGRCGRTGVATTF 562
Query: 618 LTFHDTD-VFYDLKQMLIQSNSPVPPEL 644
+ + + V DLK +LI++ +PP L
Sbjct: 563 VNKNQEETVLLDLKALLIEAGQRMPPFL 590
>gi|145349996|ref|XP_001419411.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579642|gb|ABO97704.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 236/390 (60%), Gaps = 30/390 (7%)
Query: 244 SKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 303
+ +P + ++ + L +++ + Y PSPIQ AIP+ L RDV+G AETGSGKTA
Sbjct: 25 AAVPSAIESFEDMTLVRDIMADIRYREYDKPSPIQAQAIPVILSGRDVLGCAETGSGKTA 84
Query: 304 AFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL-GIKVVSIV 362
AF +PM+ + P+ + +GPYA+VMAPTRELAQQIE E F G + IV
Sbjct: 85 AFSIPMIQHALNQAPL---RQGDGPYAIVMAPTRELAQQIEAEAKTFTRSSKGFRTAIIV 141
Query: 363 GGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV 422
GG ++ EQ +R G ++V+ATPGRLID L++ L++ ++VVLDEADRM+DMGFEPQ+
Sbjct: 142 GGTNMSEQRGALRSGVQIVVATPGRLIDHLQQGNTNLSRVSFVVLDEADRMLDMGFEPQI 201
Query: 423 VGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA 482
VL +P KP T +FSATMP VE LA YL PV V +GT
Sbjct: 202 REVLMNLP----KPHQ-------------TLLFSATMPSEVEALASDYLHKPVKVKVGTT 244
Query: 483 GKATELISQHVVMMKESEKFSRL-------QRLLDELGDKT--AIVFVNTKKNADMVAKN 533
T +SQH+ + ++EK RL QR +LG ++FV K AD +A+
Sbjct: 245 SAPTANVSQHLEKVVDAEKVDRLVTMLIGEQREAMKLGQDMPMTVIFVERKNRADEIAEL 304
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L+ LHGG+SQ +RE +L ++T R +VLVATDVA RG+D+ VAHV+N D+P
Sbjct: 305 LNAENVPAAALHGGRSQGEREAALHDYKTGRCSVLVATDVAARGLDVKGVAHVVNLDLPR 364
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDT 623
N E Y HRIGRTGRAG +G +T+F T D+
Sbjct: 365 NFEDYVHRIGRTGRAGMSGRSTSFYTDRDS 394
>gi|414591851|tpg|DAA42422.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 1353
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 246/416 (59%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R+ ++ G +P P + PE+LR + G+ NP+PIQ P+ LQ RD++
Sbjct: 582 YRQHHEVTAMGENVPAPFMTFEATGFPPEILREIHAAGFSNPTPIQAQTWPVALQNRDIV 641
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R N GP +V+APTRELA QI+ E VKF
Sbjct: 642 AIAKTGSGKTLGYLIPAFIHLRRC----HNNPMLGPTVLVLAPTRELASQIQAEVVKFGQ 697
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ + GG S Q + +G ++V+ATPGRL D LE + L+Q + +VLDEADR
Sbjct: 698 SSRVSCTCLYGGTSKVPQLRELERGADIVVATPGRLNDILEMKRINLHQVSLLVLDEADR 757
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D +P++ R T M++AT P V ++A LR
Sbjct: 758 MLDMGFEPQIRKIVDELPNA-----------------RQTLMYTATWPKEVTKIAGDLLR 800
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLLD--ELGDKTAIVFVNTKKNAD 528
+PV V IG+ + A + I+Q+V ++ +K RL+++L E G K I+F +TKK D
Sbjct: 801 DPVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILGDQERGSKI-IIFCSTKKMCD 859
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+ + + + ++HG KSQ +R+ L FRT R +VLVATDVA RG+DI D+ VIN
Sbjct: 860 QLARGIGR-NFNAVSIHGDKSQAERDNVLNQFRTGRASVLVATDVAARGLDIKDIRVVIN 918
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P IE Y HRIGRTGRAG TGV+ TF + D DL ++L +N VPP+L
Sbjct: 919 YDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYACDLVKLLQGANQLVPPQL 974
>gi|50409637|ref|XP_456892.1| DEHA2A12958p [Debaryomyces hansenii CBS767]
gi|74659543|sp|Q6BY27.1|DBP2_DEBHA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49652556|emb|CAG84869.1| DEHA2A12958p [Debaryomyces hansenii CBS767]
Length = 536
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/429 (38%), Positives = 256/429 (59%), Gaps = 24/429 (5%)
Query: 228 RDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQ 287
+D FR++ ++ G+ IP+P+ ++ E +L+ V++ G+ P+ IQ P+ L
Sbjct: 82 QDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALS 141
Query: 288 QRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEET 347
RD++GIA TGSGKT ++ LP + +I+ P +S +GP +V+APTRELA QI++E
Sbjct: 142 GRDMVGIASTGSGKTLSYCLPSIVHINAQPLLSP---GDGPIVLVLAPTRELAVQIQQEC 198
Query: 348 VKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVL 407
KF I+ + GG +Q + +G E+ IATPGRLID LE L + Y+VL
Sbjct: 199 SKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVL 258
Query: 408 DEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
DEADRM+DMGFEPQ+ ++D ++P+ R T M+SAT P V+ L
Sbjct: 259 DEADRMLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQALT 301
Query: 468 RKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTAIVFVNT 523
R YL +P+ VT+G+ A+ I+Q V ++ E EK RL + L+ + ++F +T
Sbjct: 302 RDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLETATADPEAKCLIFAST 361
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ D + L G+ +HG K Q +R+ L+ F+T + ++VATDVA RGID+ +
Sbjct: 362 KRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGI 421
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
++VIN DMPGNIE Y HRIGRTGRAG TG A +F T +++ + DL +++ ++N +PPE
Sbjct: 422 SYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMREANQTIPPE 481
Query: 644 LAKHEASKF 652
L + + F
Sbjct: 482 LMRFDRRSF 490
>gi|301755322|ref|XP_002913508.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like [Ailuropoda
melanoleuca]
Length = 654
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|350539515|ref|NP_001233132.1| ATP-dependent RNA helicase DDX3X [Sus scrofa]
gi|332113313|gb|AEE02033.1| X-linked DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 [Sus scrofa]
Length = 661
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNANITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|325192175|emb|CCA26630.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 627
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/415 (38%), Positives = 253/415 (60%), Gaps = 20/415 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + E +L PE+ R +E Y P+P+Q +IP+GL RD++
Sbjct: 134 DDIPVETSGENVPDPITIFTEVELGPEVCRNLELCKYMKPTPVQKYSIPIGLAGRDMMAC 193
Query: 295 AETGSGKTAAFVLPMLTYISR--LPPISEENEAE---GPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKT F+ P L + R P+ ++ P A+++APTRELA QI +E K
Sbjct: 194 AQTGSGKTGGFLFPTLAAMLREGAKPVDGAGSSQRKSHPAALILAPTRELASQIYDEAKK 253
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F + G+ V + GG + Q + +GC++++ATPGRL+D +ER L+ +++LDE
Sbjct: 254 FCYCTGVAPVVLYGGAEVGRQVRELERGCDLLVATPGRLVDLMERGRVSLSGIRFLILDE 313
Query: 410 ADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARK 469
ADRM+DMGFEPQ+ ++ E E++ +R T+MFSAT P ++RLA
Sbjct: 314 ADRMLDMGFEPQIRRLV------------EQEDMPRER---QTFMFSATFPREMQRLAAD 358
Query: 470 YLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADM 529
+L++ + +T+G G A++ + Q + ++ +K L R L+++ + +VFV TK+ AD
Sbjct: 359 FLQDYIFLTVGRVGSASKDVKQQIEFIEPHDKEDYLVRFLNQVQEGLILVFVETKRGADY 418
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+ + L + G+ T++HG ++Q +RE +L FR+ R VLVATDVA RG+DI V HVIN+
Sbjct: 419 LEQLLCREGFPATSIHGDRTQREREAALNSFRSGRTPVLVATDVAARGLDINGVTHVINF 478
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
D+P NI+ Y HRIGRTGRAG G A + +T + ++ +L +L++++ P L
Sbjct: 479 DLPNNIDDYVHRIGRTGRAGNLGHALSMMTDKNRNISRELYALLVENSQECPSWL 533
>gi|410218516|gb|JAA06477.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268200|gb|JAA22066.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304856|gb|JAA31028.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410342963|gb|JAA40428.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 661
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 163 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|158298027|ref|XP_318117.4| AGAP004711-PA [Anopheles gambiae str. PEST]
gi|157014611|gb|EAA13218.5| AGAP004711-PA [Anopheles gambiae str. PEST]
Length = 613
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 188/495 (37%), Positives = 273/495 (55%), Gaps = 42/495 (8%)
Query: 164 EQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-- 221
E KK++A EK+++EE + E V EK A + + E A + ++ + W+ +
Sbjct: 92 EAKKISA-VEKQLKEEEKILESVAEK---KALMGVAELAKGI--QYEDPIKTSWTPPRYI 145
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
L + R +I RE I +G +P P+R + E KL +L A+ + K PSPIQ+
Sbjct: 146 LSKPESRHEKI-REKLRILTEGENVPPPLRTFREMKLPKAVLAALAKRNIKKPSPIQVQG 204
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYIS----RLPPISEENEAEGPYAVVMAPTR 337
IP L RD+IGIA TGSGKT FVLP++ + RLP I E GPY +++ P+R
Sbjct: 205 IPAVLAGRDLIGIAFTGSGKTLVFVLPIIMFCLEQELRLPFIKRE----GPYGLIICPSR 260
Query: 338 ELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
ELA+Q + + +L I+ V +GG + + I+QG +++ATPGRL+D
Sbjct: 261 ELAKQTHDIIQYYCRHLQEAGMPEIRTVLAIGGVPVNDAIAIIQQGAHIMVATPGRLMDM 320
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
L+++ L+ C Y+ +DEADRMIDMGFE V + R
Sbjct: 321 LDKKLVTLDVCRYLCMDEADRMIDMGFEEDVRTIFSYFKGQ-----------------RQ 363
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ A+ L PV + +G AG A+ ++Q V +K+ K L L +
Sbjct: 364 TLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASMNVTQDVEYVKQEAKVVYLLECLQK 423
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
++F K++ D + + L G +HGGK QE+R S+E FR + +VLVAT
Sbjct: 424 T-PPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERYRSVESFRNQEKDVLVAT 482
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLK 630
DVA +G+D PDV HVINYDMP +IE Y HRIGRTGR+G G+ATTF+ + V DLK
Sbjct: 483 DVASKGLDFPDVQHVINYDMPDDIENYVHRIGRTGRSGSKGLATTFINKATEQFVLLDLK 542
Query: 631 QMLIQSNSPVPPELA 645
+LI++ VPP L
Sbjct: 543 HLLIEAQQKVPPFLG 557
>gi|71005310|ref|XP_757321.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
gi|74703958|sp|Q4PFD9.1|PRP5_USTMA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46096725|gb|EAK81958.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
Length = 1156
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 252/442 (57%), Gaps = 30/442 (6%)
Query: 221 KLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
++++M+E R + + I+ +G P+P+ W+ L L ++R+GY P+PIQ
Sbjct: 445 EIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLDVIKRLGYSAPTPIQS 504
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P + RD+IG+A+TGSGKT AF+LPM +I P+ +EGP ++M PTREL
Sbjct: 505 QAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPV---EPSEGPVGIIMTPTREL 561
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
A QI E F LG++ + GG I EQ +++ ++V+ATPGRLID L R
Sbjct: 562 AVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRV 621
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+VLDEADRM DMGFEPQV+ +L+ N++P+ R T +FS
Sbjct: 622 TNLYRVTYLVLDEADRMFDMGFEPQVMKILN-----NIRPD------------RQTVLFS 664
Query: 457 ATMPPAVERLARKYLRN-PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL--- 512
AT P +E LARK L+N P+ +T+G I Q V + E KF RL +L EL
Sbjct: 665 ATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILGELYNR 724
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D ++FV+ ++ AD + K+L + GY +LHGGK Q R+ ++ F+ ++ AT
Sbjct: 725 EKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTAT 784
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + VINYD+P ++E Y HR GRTGRAG+ G TF+T D+
Sbjct: 785 SVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIA 844
Query: 632 MLIQSNSPVPPELAKHEASKFK 653
L S + VPPEL AS FK
Sbjct: 845 ALKASAAHVPPELEAMAAS-FK 865
>gi|327265659|ref|XP_003217625.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Anolis
carolinensis]
Length = 672
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 178/471 (37%), Positives = 265/471 (56%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHW-SEKKLEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W + + + M+E R+ ++I +G
Sbjct: 167 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWRAPRYVLAMSEARHDRVRKKYHILVEGE 224
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G + P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 225 AIPPPLKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 284
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQ---IEEETVKFAHYLG-- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q I E + H G
Sbjct: 285 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLHEDGMP 340
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ I+ G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 341 SLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDVCRYLALDEADRMI 400
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 401 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 443
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
+ + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 444 ITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 502
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 503 LLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 562
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 563 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 613
>gi|413950350|gb|AFW82999.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 778
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/415 (40%), Positives = 243/415 (58%), Gaps = 25/415 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G +P P+ ++ G E+L+ ++R G+ +P+PIQ + P+ +Q +DV+
Sbjct: 127 YRRRHEITVTGDNVPAPITSFEAGGFPSEILKEIQRAGFASPTPIQAQSWPIAMQNQDVV 186
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP +I RL + + GP +V+APTRELA QI +E +KF
Sbjct: 187 AIAKTGSGKTLGYLLPGFMHIKRL----QNSTRNGPTVLVLAPTRELATQILDEAMKFGR 242
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G +VV+ATPGRL D LE R L Q +Y+VLDEADR
Sbjct: 243 SSRISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRVSLKQVSYLVLDEADR 302
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P R T M++AT P V R+A L
Sbjct: 303 MLDMGFEPQIRKIVKEIPHR-----------------RQTLMYTATWPKEVRRIADDLLV 345
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL-DELGDKTAIVFVNTKKNADM 529
+P+ VTIG + A I+QH+ ++ SEK RL+++L ++ ++F TK+ D
Sbjct: 346 HPLQVTIGNVDELVANSAITQHIEVITPSEKQRRLEQILRSQVSGSKILIFCTTKRMCDQ 405
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+A+ L + + + +HG KSQ +RE L FR+ R +LVATDVA RG+DI D+ VINY
Sbjct: 406 LARTLTRQ-FGASAIHGDKSQSEREKVLNHFRSGRSPILVATDVAARGLDIKDIRVVINY 464
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
D P +E Y HRIGRTGRAG TGVA TF D+ DL ++L +N VP +L
Sbjct: 465 DFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIKILEGANQQVPRDL 519
>gi|452837220|gb|EME39162.1| hypothetical protein DOTSEDRAFT_179601 [Dothistroma septosporum
NZE10]
Length = 689
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 249/417 (59%), Gaps = 25/417 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L L+ +E GYK P+P+Q +IP+ + RD++
Sbjct: 186 DDIPVEASGQGVPEPVTTFTNPPLDDHLIGNIELAGYKQPTPVQKYSIPIVMGGRDLMAC 245
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P + G P ++++APTREL QI +E
Sbjct: 246 AQTGSGKTGGFLFPILSQAYQNGPSANAAAQSGFGRQRKAYPTSLILAPTRELVSQIYDE 305
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
+ KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+V
Sbjct: 306 SRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLANIKYLV 365
Query: 407 LDEADRMIDMGFEPQVVGVLDA--MPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
LDEADRM+DMGFEPQ+ +++ MP+++ R T MFSAT P ++
Sbjct: 366 LDEADRMLDMGFEPQIRRIVEGEDMPATD---------------GRQTLMFSATFPRDIQ 410
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTK 524
LAR +LR + +++G G +E I+Q + +++++K S L +L G ++FV TK
Sbjct: 411 MLARDFLREYIFLSVGRVGSTSENITQKIEYVEDTDKRSVLLDILHTHGAGLTLIFVETK 470
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+ AD ++ L G+ T++HG ++Q +RE +LE FRT R +LVAT VA RG+DIP+V
Sbjct: 471 RMADSLSDYLINQGFPATSIHGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPNVK 530
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
HV+NYD+P +I+ Y HRIGRTGRAG TG++T F + V DL +L ++N VP
Sbjct: 531 HVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGNRGVVRDLIDLLKEANQEVP 587
>gi|449662055|ref|XP_002163251.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Hydra
magnipapillata]
Length = 790
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/425 (40%), Positives = 244/425 (57%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ +TE + RE + G+ RP ++ L+ + Y P+PIQ A
Sbjct: 247 IKALTEPAVKNLREKLGLKVMGADPARPAISFGHFGFDDHLMGVIRSSNYSKPTPIQSQA 306
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P+ L RD+IGIA TGSGKTAAFV PML +I P + E +GP A++ APTREL Q
Sbjct: 307 VPVALSGRDIIGIARTGSGKTAAFVWPMLVHIMAQPVLKE---GDGPIALICAPTRELCQ 363
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI E +F ++ V+ GG S EQ ++QG E+V+ TPGRLID ++ + L +
Sbjct: 364 QINSECKRFGKCYNLRSVACYGGGSKWEQTKGLQQGAEIVVCTPGRLIDLIKAKATNLLR 423
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+V DEADRM DMGFEPQV + ++N++P+ R +FSATM
Sbjct: 424 VTYLVFDEADRMFDMGFEPQVRSI-----ANNVRPD------------RQCLLFSATMKK 466
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR--LQRLLDELGDKTAIV 519
VE L R L +P+ + +G G+A E I Q V +MK ++ L +++ + ++
Sbjct: 467 KVEWLCRDILSDPIRIVVGELGEANEDIVQAVEVMKSPQQKWNWLLSHIVEFTSGGSVLI 526
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV K N++ VA NL + GY + +HG Q +R L+ F+ K++ +LVATDVA RG+D
Sbjct: 527 FVTKKSNSEEVAANLKEQGYELGLIHGDFDQFERNNVLKQFKQKQFLILVATDVAARGLD 586
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
IP + VINYD+ +I +THRIGRTGRAG+ G+A T +T DT DL + L +N
Sbjct: 587 IPSIKTVINYDVARDITTHTHRIGRTGRAGEKGIAYTLITPQDTHFAADLVRNLEGANQR 646
Query: 640 VPPEL 644
VP EL
Sbjct: 647 VPDEL 651
>gi|426395633|ref|XP_004064072.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Gorilla
gorilla gorilla]
Length = 658
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|301171467|ref|NP_001180345.1| ATP-dependent RNA helicase DDX3X isoform 2 [Homo sapiens]
gi|387273347|gb|AFJ70168.1| ATP-dependent RNA helicase DDX3X isoform 2 [Macaca mulatta]
Length = 661
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|154315049|ref|XP_001556848.1| hypothetical protein BC1G_04866 [Botryotinia fuckeliana B05.10]
gi|160419161|sp|A6RW79.1|PRP5_BOTFB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1151
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 259/450 (57%), Gaps = 31/450 (6%)
Query: 206 YDTFDM---RVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D+ R + + +L EMTE + R + + I G +P+P++ W++ L +
Sbjct: 505 YSALDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVK 564
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
L + ++GY+ P+ IQM AIP + RDVIG+A+TGSGKT AF+LPM +I P+
Sbjct: 565 SLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL-- 622
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
++GP ++M PTRELA QI +E F +G++ V GG I++Q +++G E++
Sbjct: 623 -KGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEII 681
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+I+ L R L + YVVLDEADRM DMGFEPQV+ V + N++P
Sbjct: 682 VCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFN-----NIRPN- 735
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
R T +FSATMP ++ LA+K L++PV + +G I+Q V + +E
Sbjct: 736 -----------RQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREE 784
Query: 499 SEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
EKF RL LL EL D ++FV+ ++ AD + K+L + GY ++HGGK Q R+
Sbjct: 785 KEKFHRLLELLGELYNTDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRD 844
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+++ F+ +++AT VA RG+D+ + V+N+D P ++E Y HR GRTGRAG TG A
Sbjct: 845 STIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTA 904
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TF+T + + L QS VP L
Sbjct: 905 VTFITEEQEQYSVGIAKALEQSGQEVPDRL 934
>gi|189193873|ref|XP_001933275.1| ATP-dependent RNA helicase DED1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978839|gb|EDU45465.1| ATP-dependent RNA helicase DED1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 686
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 248/416 (59%), Gaps = 22/416 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL +E GYK P+P+Q +IP+ + RD++
Sbjct: 179 DDIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMAC 238
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG---------PYAVVMAPTRELAQQIEE 345
A+TGSGKT F+ P+L + P +A+G P ++V+APTREL QI +
Sbjct: 239 AQTGSGKTGGFLFPILAQAFQNGPSPPPQQAQGGYGRQRKAYPTSLVLAPTRELVSQIFD 298
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+
Sbjct: 299 EARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYL 358
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ E ED R T MFSAT P ++
Sbjct: 359 VLDEADRMLDMGFEPQIRRIV----------EGEDMPPTAGR---QTLMFSATFPRDIQM 405
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LAR +L++ + +++G G +E I+Q + +++ +K S L +L G +++FV TK+
Sbjct: 406 LARDFLKDYIFLSVGRVGSTSENITQKIEYVEDVDKRSVLLDILHTHGAGLSLIFVETKR 465
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD ++ L G+ T++HG ++Q +RE +LE FRT R +LVAT VA RG+DIP+V H
Sbjct: 466 MADSLSDFLINQGFPATSIHGDRTQREREKALEMFRTGRCPILVATAVAARGLDIPNVTH 525
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V+NYD+P +I+ Y HRIGRTGRAG TG+AT F + V DL ++L ++N VP
Sbjct: 526 VVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLLELLKEANQEVP 581
>gi|453081962|gb|EMF10010.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 679
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 248/418 (59%), Gaps = 21/418 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L L+ +E GYK P+P+Q +IP+ + RD++
Sbjct: 179 DDIPVEASGQGVPEPVTTFTNPPLDDHLIANIELSGYKMPTPVQKYSIPIVMGGRDLMAC 238
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P + G P ++++APTREL QI EE
Sbjct: 239 AQTGSGKTGGFLFPILSQAFQNGPAGNVPQQGGFQRQRKALPTSLILAPTRELVSQIYEE 298
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
+ KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+V
Sbjct: 299 SRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLANIKYLV 358
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ ++ E ED E R T MFSAT P ++ L
Sbjct: 359 LDEADRMLDMGFEPQIRRIV----------EGEDMPSTEGR---QTLMFSATFPRDIQLL 405
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +LR + +++G G +E I+Q V +++ +K S L +L G ++FV TK+
Sbjct: 406 ARDFLREYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDILHTHGAGLTLIFVETKRM 465
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD ++ L G+ T++HG ++Q +RE +LE FR R +LVAT VA RG+D+P+V HV
Sbjct: 466 ADSLSDYLINQGFPATSIHGDRTQRERERALEMFRAGRCPILVATAVAARGLDVPNVVHV 525
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
INYD+P +I+ Y HRIGRTGRAG TGV+T+F + V DL ++L ++N VP L
Sbjct: 526 INYDLPTDIDDYVHRIGRTGRAGNTGVSTSFFNRGNRGVVRDLLELLKEANQEVPAFL 583
>gi|397488758|ref|XP_003815413.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 3 [Pan
paniscus]
Length = 646
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|392568072|gb|EIW61246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 830
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 169/431 (39%), Positives = 248/431 (57%), Gaps = 28/431 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+ EMT+ D + R + + I +G PRP+ W+ L L ++++GY P+PIQ
Sbjct: 140 IAEMTDEDADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLEVIKKLGYAGPTPIQAQ 199
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ + EGP AV+M PTRELA
Sbjct: 200 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL---EQMEGPVAVIMTPTRELA 256
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 257 VQIHRECKPFLRVLNLRAVCAYGGSPIKDQIAEMKKGAEIIVCTPGRMIDLLTANSGRVT 316
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSA
Sbjct: 317 NLKRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD------------RQTVLFSA 359
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL----DELG 513
T P ++ LARK LR P+ +T+G I Q V + E KF+RL +L +E
Sbjct: 360 TFPRQMDSLARKILRKPLEITVGGRSVVAPEIEQIVEVRDEDSKFNRLLEILGQTYNEDP 419
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
+ ++FV+ ++ AD + + L + GY +LHGGK Q R+ ++ F++ V++AT V
Sbjct: 420 ECRTLIFVDRQEGADNLLRELMRKGYLCMSLHGGKDQVDRDSTIADFKSGVVPVVIATSV 479
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ + VINYD P ++E Y HR GRTGRAG G TF+T D+ + L
Sbjct: 480 AARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQDRYSVDIYRAL 539
Query: 634 IQSNSPVPPEL 644
S++ +P EL
Sbjct: 540 QASSAAMPKEL 550
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 242/414 (58%), Gaps = 22/414 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
R N+ G+ P+P ++A +L+ + + Y P+PIQ +P+ L RD+I
Sbjct: 234 LRHKLNLRVSGAAPPKPCTSFAHFNFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 293
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTAAF+ PML +I E EGP AV++ PTREL QQI E +F
Sbjct: 294 GIAKTGSGKTAAFIWPMLVHIMDQ---KELEPGEGPIAVIVCPTRELCQQIHAECKRFGK 350
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ V++ GG S+ EQ +++G E+V+ TPGRLID ++++ L + Y+V DEADR
Sbjct: 351 AYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADR 410
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M DMGFE QV + +S+++P+ R T +FSAT +ERLAR L
Sbjct: 411 MFDMGFEYQVRSI-----ASHVRPD------------RQTLLFSATFRKKIERLARDILV 453
Query: 473 NPVVVTIGTAGKATELISQHVVMM-KESEKFSRLQRLLDEL-GDKTAIVFVNTKKNADMV 530
+P+ V G G+A E ++Q V M+ S+K+ L R L E + ++FV K N + +
Sbjct: 454 DPIRVVQGDIGEANEDVTQVVEMLVSGSDKWGWLTRRLVEFTSTGSVLIFVTKKANCEEL 513
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A NL++ GY + LHG Q +R + F+ K VLVATDVA RG+DIP + V+NYD
Sbjct: 514 ATNLNQEGYSLGLLHGDMDQSERNKVISDFKKKNLPVLVATDVAARGLDIPSIRTVVNYD 573
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ +I+ +THRIGRTGRAG+ GVA T LT DT DL + L +N V EL
Sbjct: 574 VARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDTSFAGDLVRNLEGANQSVSKEL 627
>gi|3986287|dbj|BAA34994.1| DjVLGB [Dugesia japonica]
Length = 781
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 172/467 (36%), Positives = 265/467 (56%), Gaps = 33/467 (7%)
Query: 184 EGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKG 243
+GV+ P L + + DLY D + S ++ + D Y
Sbjct: 129 DGVKSNP---MGLHILQNGIDLYTNVDS--NSVTSAINFDKYDSIPVSVTGPD----YSA 179
Query: 244 SKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 303
+ + + N+ E KL P + + Y+ P+PIQ AIP L+ RD++ A+TGSGKTA
Sbjct: 180 TNV---IENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTA 236
Query: 304 AFVLPMLTYISRLPPISEENEAEGPY--AVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
AF++P++ ++ ++++ ++ Y +++APTRELA QI E+ KF+ ++ +
Sbjct: 237 AFLIPIINHLV-CQDLNQQRYSKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVV 295
Query: 362 VGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
GG Q ++ GC +++ATPGRL+D +E+ L C Y+VLDEADRM+DMGFEPQ
Sbjct: 296 YGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQ 355
Query: 422 VVGVLD--AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
+ +++ MPS I R T MFSAT P +++LA +L N + +T+
Sbjct: 356 IRKIIEESNMPSG---------------INRQTLMFSATFPKEIQKLAADFLYNYIFMTV 400
Query: 480 GTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLG 538
G G ++ I Q ++ M + EK + L+ + + T I +FV TKK AD +A+ L G
Sbjct: 401 GRVGSTSDSIKQEIIYMTDVEKLNYLKNIFNTTAPNTLILIFVETKKGADSLARFLLSKG 460
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
Y V+++HG +SQ +RE +L FR + +LVAT VA RG+DIP+V HVINYD+P +IE Y
Sbjct: 461 YPVSSIHGDRSQVEREAALSMFRNGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEY 520
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
HRIGRTGR G G AT+F + ++ DL +L ++N VP L+
Sbjct: 521 VHRIGRTGRLGNHGRATSFYVDKNNNIAIDLVDLLKEANQIVPQWLS 567
>gi|449439149|ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 168/429 (39%), Positives = 256/429 (59%), Gaps = 24/429 (5%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K++ MT + +R+ + G +P+P++ W + LT ++L ++++ Y+ P PIQ
Sbjct: 363 KEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQA 422
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML +I P+ +GP ++MAPTREL
Sbjct: 423 QALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVP---GDGPIGLIMAPTREL 479
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QQI + KF+ +G++ V + GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 480 VQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKI 539
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + Y+V+DEADRM DMGFEPQ+ ++ N++P+ R T +FS
Sbjct: 540 TNLRRVTYLVMDEADRMFDMGFEPQITRIV-----QNIRPD------------RQTVLFS 582
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV V +G + I+Q V + E+E+F RL LL E +K
Sbjct: 583 ATFPRQVEILARKVLNKPVEVQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEKG 642
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I +FV++++ D + ++L K GY +LHG K Q RE ++ F++ N+L+AT +A
Sbjct: 643 KILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAA 702
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ VIN+D+P + E Y HR+GRTGRAG+ G A TF+ D+ DL + L
Sbjct: 703 RGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALEL 762
Query: 636 SNSPVPPEL 644
S VP +L
Sbjct: 763 SEQVVPDDL 771
>gi|426256872|ref|XP_004022060.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Ovis aries]
Length = 661
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 163 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|300794325|ref|NP_001179891.1| ATP-dependent RNA helicase DDX3X [Bos taurus]
gi|296470612|tpg|DAA12727.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Bos
taurus]
Length = 661
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 163 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|414591850|tpg|DAA42421.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 1298
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 246/416 (59%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R+ ++ G +P P + PE+LR + G+ NP+PIQ P+ LQ RD++
Sbjct: 582 YRQHHEVTAMGENVPAPFMTFEATGFPPEILREIHAAGFSNPTPIQAQTWPVALQNRDIV 641
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +++P ++ R N GP +V+APTRELA QI+ E VKF
Sbjct: 642 AIAKTGSGKTLGYLIPAFIHLRRC----HNNPMLGPTVLVLAPTRELASQIQAEVVKFGQ 697
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
+ + GG S Q + +G ++V+ATPGRL D LE + L+Q + +VLDEADR
Sbjct: 698 SSRVSCTCLYGGTSKVPQLRELERGADIVVATPGRLNDILEMKRINLHQVSLLVLDEADR 757
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D +P++ R T M++AT P V ++A LR
Sbjct: 758 MLDMGFEPQIRKIVDELPNA-----------------RQTLMYTATWPKEVTKIAGDLLR 800
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLLD--ELGDKTAIVFVNTKKNAD 528
+PV V IG+ + A + I+Q+V ++ +K RL+++L E G K I+F +TKK D
Sbjct: 801 DPVQVNIGSIDELVANKSITQYVEVVPPMDKQRRLEQILGDQERGSKI-IIFCSTKKMCD 859
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+ + + + ++HG KSQ +R+ L FRT R +VLVATDVA RG+DI D+ VIN
Sbjct: 860 QLARGIGR-NFNAVSIHGDKSQAERDNVLNQFRTGRASVLVATDVAARGLDIKDIRVVIN 918
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P IE Y HRIGRTGRAG TGV+ TF + D DL ++L +N VPP+L
Sbjct: 919 YDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYACDLVKLLQGANQLVPPQL 974
>gi|347841781|emb|CCD56353.1| similar to pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Botryotinia fuckeliana]
Length = 1179
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 259/450 (57%), Gaps = 31/450 (6%)
Query: 206 YDTFDM---RVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPE 261
Y D+ R + + +L EMTE + R + + I G +P+P++ W++ L +
Sbjct: 505 YSALDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKDVPKPVQKWSQCGLDVK 564
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
L + ++GY+ P+ IQM AIP + RDVIG+A+TGSGKT AF+LPM +I P+
Sbjct: 565 SLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL-- 622
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
++GP ++M PTRELA QI +E F +G++ V GG I++Q +++G E++
Sbjct: 623 -KGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEII 681
Query: 382 IATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
+ TPGR+I+ L R L + YVVLDEADRM DMGFEPQV+ V + N++P
Sbjct: 682 VCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFN-----NIRPN- 735
Query: 439 EDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
R T +FSATMP ++ LA+K L++PV + +G I+Q V + +E
Sbjct: 736 -----------RQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREE 784
Query: 499 SEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
EKF RL LL EL D ++FV+ ++ AD + K+L + GY ++HGGK Q R+
Sbjct: 785 KEKFHRLLELLGELYNTDEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRD 844
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+++ F+ +++AT VA RG+D+ + V+N+D P ++E Y HR GRTGRAG TG A
Sbjct: 845 STIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTA 904
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TF+T + + L QS VP L
Sbjct: 905 VTFITEEQEQYSVGIAKALEQSGQEVPDRL 934
>gi|338728998|ref|XP_001491482.3| PREDICTED: ATP-dependent RNA helicase DDX3X-like [Equus caballus]
Length = 797
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 299 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 358
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 359 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 418
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 419 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 478
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 479 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 523
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 524 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 583
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 584 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 643
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 644 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 703
Query: 642 PEL 644
L
Sbjct: 704 SWL 706
>gi|291407356|ref|XP_002719895.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3
[Oryctolagus cuniculus]
Length = 661
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNVNITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|449483012|ref|XP_002190578.2| PREDICTED: ATP-dependent RNA helicase DDX3X [Taeniopygia guttata]
Length = 750
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 254 DDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 313
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 314 AQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 373
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 374 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 433
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 434 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 478
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 479 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEPDKRSFLLDLLNATGKDSLTLVFV 538
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 539 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 598
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 599 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 658
Query: 642 PEL 644
L
Sbjct: 659 SWL 661
>gi|193666978|ref|XP_001948493.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Acyrthosiphon pisum]
Length = 666
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 169/410 (41%), Positives = 250/410 (60%), Gaps = 24/410 (5%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
ISY GS IP P+ N+ E L + V++ G+ NP+PIQ + P+ L R+++GIA+TG
Sbjct: 110 ISYVGSNIPDPIMNFNEVILPDYVFNEVKKQGFNNPTPIQAVSWPIALSGRNMVGIAQTG 169
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT A++LP + +I+ P + +GP +V+APTRELAQQI++ V F ++
Sbjct: 170 SGKTLAYMLPAILHINHQPRLLR---YDGPIVLVLAPTRELAQQIQQVAVSFGTSTFVRN 226
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 418
+ GG Q + +G E+VIATPGRLID LER L +C Y+VLDEADRM+DMGF
Sbjct: 227 TCVFGGAPKGPQVDDLERGVEIVIATPGRLIDFLERNTTNLKRCTYLVLDEADRMLDMGF 286
Query: 419 EPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVT 478
EPQ+ +++ ++P+ R M+SAT PP V+ LA ++L + + V
Sbjct: 287 EPQIRKIIEQ-----IRPD------------RQVLMWSATWPPEVKNLAEEFLDDYIQVN 329
Query: 479 IGTAG-KATELISQHVVMMKESEKFSRLQRLLDEL---GDKTAIVFVNTKKNADMVAKNL 534
+G+ A ISQ V + + EK +L LL ++ D I+FV TK++ D + K +
Sbjct: 330 VGSLNLSANHNISQVVDVCDDYEKEQKLYALLTDIFSQPDNKTIIFVETKRSVDNIVKLV 389
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
++ G+R +HG KSQ +R+ +L FR+ + N+LVATDVA RG+D+ DV +VIN+D P +
Sbjct: 390 NRNGWRSIGIHGNKSQNERDHTLNQFRSGQANILVATDVAARGLDVDDVKYVINFDYPNS 449
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
E Y HRIGRTGR+ +TG A TF+T + DL +L ++ V P+L
Sbjct: 450 SEDYVHRIGRTGRSSRTGTAFTFVTPSNARQAKDLISVLQEAKQVVNPKL 499
>gi|410342947|gb|JAA40420.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410342949|gb|JAA40421.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410342955|gb|JAA40424.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410342957|gb|JAA40425.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410342959|gb|JAA40426.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410342961|gb|JAA40427.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 662
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|397488754|ref|XP_003815411.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Pan
paniscus]
gi|410218508|gb|JAA06473.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410218510|gb|JAA06474.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410218518|gb|JAA06478.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410218522|gb|JAA06480.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410218524|gb|JAA06481.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410218526|gb|JAA06482.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268192|gb|JAA22062.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268196|gb|JAA22064.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268202|gb|JAA22067.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268204|gb|JAA22068.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268206|gb|JAA22069.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268210|gb|JAA22071.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304848|gb|JAA31024.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304854|gb|JAA31027.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304858|gb|JAA31029.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304862|gb|JAA31031.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304864|gb|JAA31032.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304866|gb|JAA31033.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 662
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|426256874|ref|XP_004022061.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Ovis aries]
Length = 645
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 147 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 206
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 207 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 266
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 267 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 326
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 327 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 371
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 372 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 431
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 432 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 491
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 492 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 551
Query: 642 PEL 644
L
Sbjct: 552 SWL 554
>gi|197692141|dbj|BAG70034.1| ATP-dependent RNA helicase DDX3X [Homo sapiens]
gi|197692387|dbj|BAG70157.1| ATP-dependent RNA helicase DDX3X [Homo sapiens]
Length = 662
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVGATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|407785286|ref|ZP_11132434.1| ATP-dependent RNA helicase [Celeribacter baekdonensis B30]
gi|407203318|gb|EKE73305.1| ATP-dependent RNA helicase [Celeribacter baekdonensis B30]
Length = 542
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 161/393 (40%), Positives = 229/393 (58%), Gaps = 31/393 (7%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
+ +++ L P++L+A+E GY+ P+PIQ AIP L+ RDV+GIA+TG+GKTA+FVLPM
Sbjct: 23 LTKFSDLNLAPKVLKAIEDAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFVLPM 82
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+T +SR A P ++V+ PTRELA Q+ E + Y+ + ++GG S +E
Sbjct: 83 ITLLSR-----GRARARMPRSLVLCPTRELAAQVAENFDTYTKYMKLTKALLIGGVSFKE 137
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+IATPGRL+D ER +L+ +V+DEADRM+DMGF P + +
Sbjct: 138 QDILIDKGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLT 197
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T FSATM P +ER+ +L P + + + E I
Sbjct: 198 P-----------------FTRQTLFFSATMAPEIERITNTFLSAPARIEVARQASSGENI 240
Query: 490 SQHVVMMKES-------EKFSRLQRLLDELGDK--TAIVFVNTKKNADMVAKNLDKLGYR 540
QHVVM K S EK L+ L+D G+K AIVF N K + D+V+++L K GY
Sbjct: 241 EQHVVMFKASRRDRAASEKRQLLRTLIDLEGEKLDNAIVFCNRKTDVDIVSQSLKKYGYD 300
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +LEGFR + +LVA+DVA RG+D+P V HV N+D+P + E Y H
Sbjct: 301 AAPIHGDLEQSQRNATLEGFRGGKLKILVASDVAARGLDVPSVTHVFNFDVPSHAEDYVH 360
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
RIGRTGRAG+ G D F D+++++
Sbjct: 361 RIGRTGRAGRDGKTIMLCEPRDEKNFADVERLI 393
>gi|301171475|ref|NP_001180346.1| ATP-dependent RNA helicase DDX3X isoform 3 [Homo sapiens]
gi|296235291|ref|XP_002762846.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Callithrix
jacchus]
gi|297709770|ref|XP_002831597.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Pongo
abelii]
gi|402909918|ref|XP_003917648.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 3 [Papio
anubis]
gi|194388152|dbj|BAG65460.1| unnamed protein product [Homo sapiens]
Length = 646
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|74006722|ref|XP_861268.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 3 [Canis lupus
familiaris]
Length = 662
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|410218512|gb|JAA06475.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268194|gb|JAA22063.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304850|gb|JAA31025.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 661
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 250/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+ + + ++ ++ Y P+P+Q AIP+ +RD++
Sbjct: 163 DDIPVEATGSNCPPHIENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|87196351|ref|NP_001347.3| ATP-dependent RNA helicase DDX3X isoform 1 [Homo sapiens]
gi|390479673|ref|XP_002762845.2| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Callithrix
jacchus]
gi|395753838|ref|XP_002831596.2| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Pongo
abelii]
gi|402909914|ref|XP_003917646.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Papio
anubis]
gi|410988375|ref|XP_004000461.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Felis catus]
gi|3023628|sp|O00571.3|DDX3X_HUMAN RecName: Full=ATP-dependent RNA helicase DDX3X; AltName: Full=DEAD
box protein 3, X-chromosomal; AltName: Full=DEAD box, X
isoform; AltName: Full=Helicase-like protein 2;
Short=HLP2
gi|2148924|gb|AAB95637.1| helicase like protein 2 [Homo sapiens]
gi|3523150|gb|AAC34298.1| DEAD box RNA helicase DDX3 [Homo sapiens]
gi|15080078|gb|AAH11819.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Homo sapiens]
gi|119579806|gb|EAW59402.1| hCG19318, isoform CRA_a [Homo sapiens]
gi|119579807|gb|EAW59403.1| hCG19318, isoform CRA_a [Homo sapiens]
gi|119579808|gb|EAW59404.1| hCG19318, isoform CRA_a [Homo sapiens]
gi|119579809|gb|EAW59405.1| hCG19318, isoform CRA_a [Homo sapiens]
gi|158255742|dbj|BAF83842.1| unnamed protein product [Homo sapiens]
gi|168277370|dbj|BAG10663.1| ATP-dependent RNA helicase DDX3X [synthetic construct]
gi|355757296|gb|EHH60821.1| ATP-dependent RNA helicase DDX3X [Macaca fascicularis]
gi|380783109|gb|AFE63430.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783111|gb|AFE63431.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783113|gb|AFE63432.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783115|gb|AFE63433.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783117|gb|AFE63434.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783119|gb|AFE63435.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783121|gb|AFE63436.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|380783123|gb|AFE63437.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
Length = 662
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|426395631|ref|XP_004064071.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Gorilla
gorilla gorilla]
Length = 666
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|410896268|ref|XP_003961621.1| PREDICTED: ATP-dependent RNA helicase DDX3Y-like [Takifugu
rubripes]
Length = 683
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 171/427 (40%), Positives = 252/427 (59%), Gaps = 32/427 (7%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + + + + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 185 DDIPVEATGANSPSHIDCFQDVDMGEIIMGNIELSRYTRPTPVQKYAIPIIKGKRDLMAC 244
Query: 295 AETGSGKTAAFVLPMLTYISRLPP---------ISEENEAEG-----PYAVVMAPTRELA 340
A+TGSGKTAAF+LP+L+ I P +EN G P A+V+APTRELA
Sbjct: 245 AQTGSGKTAAFLLPVLSQIYTEGPGDALQAIKNSGQENGRYGRRKQFPIALVLAPTRELA 304
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI +E KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+
Sbjct: 305 LQIYDEARKFAYRSRVRPCVVYGGADIGQQIRELERGCHLLVATPGRLVDMMERGKIGLD 364
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
CNY+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT
Sbjct: 365 YCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGI---------------RQTMMFSAT 409
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTA 517
P ++ LAR +L + + + +G G +E I+Q VV ++E +K S L LL+ G D
Sbjct: 410 FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEEVDKRSFLLDLLNATGKDSLT 469
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VFV TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG
Sbjct: 470 LVFVETKKGADSLEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG 529
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F ++++ DL +L+++
Sbjct: 530 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDLLVEAK 589
Query: 638 SPVPPEL 644
+P L
Sbjct: 590 QGIPTWL 596
>gi|430814732|emb|CCJ28079.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1017
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 253/433 (58%), Gaps = 33/433 (7%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L EM+E +R + + I +G P+P++NW++ L +L + + Y+ P+ IQ
Sbjct: 295 LAEMSEEKVNDYRLELDGIKIRGLGCPKPVQNWSQCGLPAHVLDIIYHLNYQKPTAIQAQ 354
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I PI + EGP A++M PTRELA
Sbjct: 355 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPI---DSLEGPIALIMTPTRELA 411
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F +K V GG I++Q +++G E+V+ TPGR+ID L + R
Sbjct: 412 VQIHKECKHF-----LKAVCAYGGSPIKDQIAELKRGAEIVVCTPGRIIDLLGANQGRVT 466
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + +Y+VLDEADRM D+GFEPQV+ V++ N++P+ R T +FSA
Sbjct: 467 NLKRTSYIVLDEADRMFDLGFEPQVMKVVN-----NVRPD------------RQTVLFSA 509
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----G 513
T P ++ L+RK L+ P+ +T+G I Q V + E KF RL LL L
Sbjct: 510 TFPKQMDALSRKILQKPIEITVGARSVVAPEIQQIVEVCTEDNKFIRLLELLGNLYVNDD 569
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
D +VFV+ ++ AD + ++L + GY ++HGGK Q R+ ++ FR + +L+AT V
Sbjct: 570 DVRTLVFVDRQEAADSLLRDLMRRGYPCMSIHGGKDQFDRDSTIADFRAGVFPILIATSV 629
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+DI + V+NYD P ++E Y HR+GRTGRAG+TG A TF+T D+ + L
Sbjct: 630 AARGLDIKQLKLVVNYDCPNHLEDYVHRVGRTGRAGETGTAVTFITPEQDRYAADIVRAL 689
Query: 634 IQSNSPVPPELAK 646
S + +P ++ K
Sbjct: 690 KISKAHIPEDVQK 702
>gi|2580550|gb|AAC51829.1| dead box, X isoform [Homo sapiens]
gi|2580552|gb|AAC51830.1| dead box, X isoform [Homo sapiens]
Length = 662
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|62087546|dbj|BAD92220.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 variant [Homo
sapiens]
Length = 674
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 176 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 235
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 236 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 295
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 296 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 355
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 356 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 400
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 401 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 460
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 461 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 520
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 521 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 580
Query: 642 PEL 644
L
Sbjct: 581 SWL 583
>gi|225682788|gb|EEH21072.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides brasiliensis Pb03]
Length = 1203
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 249/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +TE + R + + I +G +P+P++ W++ L + L + ++ Y+NP+ IQ
Sbjct: 548 LAGLTEEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQ 607
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 608 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL--EN-MEGPIGLIMTPTRELA 664
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 665 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVT 724
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P+ R T +FSA
Sbjct: 725 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----GNVRPQ------------RQTVLFSA 767
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G I+Q V + E KF RL LL +L
Sbjct: 768 TFPRNMEALARKTLTKPVEIVVGGRSVVAPEITQIVEVRNEDTKFVRLLALLGDLYADDN 827
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D ++FV+ ++ AD + ++L GY ++HGGK Q R+ ++ F+ + +L+AT
Sbjct: 828 NEDARTLIFVDRQEAADGLLRDLMHKGYPCMSIHGGKDQVDRDSTIADFKAGVFPILIAT 887
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 888 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEVQERYSVDISK 947
Query: 632 MLIQSNSPVPPELAK 646
L QS PVP + K
Sbjct: 948 ALKQSGQPVPEAVQK 962
>gi|320037247|gb|EFW19185.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
posadasii str. Silveira]
Length = 853
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 252/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L E+ + + R + + I +G +P+P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 185 LAELNDEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQ 244
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP ++M PTRELA
Sbjct: 245 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL--EN-MEGPVGLIMTPTRELA 301
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 302 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVT 361
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ SN++P R T +FSA
Sbjct: 362 NLRRVTYVVLDEADRMFDMGFEPQVMKII-----SNIRPS------------RQTVLFSA 404
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----- 512
T P +E LARK L PV + +G + I+Q V + E+ KF RL LL L
Sbjct: 405 TFPRNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENTKFVRLLELLGNLYSDDN 464
Query: 513 -GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + VL+AT
Sbjct: 465 NEDARALIFVDRQEAADGLLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIAT 524
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + VINYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 525 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAK 584
Query: 632 MLIQSNSPVPPELAK 646
L QS VP + K
Sbjct: 585 ALKQSGQSVPEAVQK 599
>gi|45361237|ref|NP_989196.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Xenopus
(Silurana) tropicalis]
gi|38649000|gb|AAH63374.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Xenopus
(Silurana) tropicalis]
Length = 699
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++ + + ++ ++ Y P+P+Q AIP+ +++RD++
Sbjct: 206 DDIPVEATGNNCPPHIESFQDVTMGEIIMGNIQLSRYTRPTPVQKHAIPIIIEKRDLMAC 265
Query: 295 AETGSGKTAAFVLPMLTYISRLPPIS-----EENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 266 AQTGSGKTAAFLLPILSQIYADGPGDAMKHLKENGRYGRRKQFPLSLVLAPTRELAVQIY 325
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ CNY
Sbjct: 326 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCNY 385
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 386 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RQTMMFSATFPKE 430
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 431 IQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLDLLNATGKDSLTLVFV 490
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 491 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 550
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 551 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 610
Query: 642 PEL 644
L
Sbjct: 611 SWL 613
>gi|426229383|ref|XP_004008770.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Ovis aries]
Length = 622
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|156119497|ref|NP_001095245.1| putative ATP-dependent RNA helicase an3 [Xenopus laevis]
gi|113825|sp|P24346.1|DDX3_XENLA RecName: Full=Putative ATP-dependent RNA helicase an3
gi|65060|emb|CAA40605.1| ATP dependent RNA helicase [Xenopus laevis]
Length = 697
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++ + + ++ ++ Y P+P+Q AIP+ +++RD++
Sbjct: 205 DDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMAC 264
Query: 295 AETGSGKTAAFVLPMLTYISRLPPIS-----EENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 265 AQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIY 324
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 325 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 384
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 385 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RQTMMFSATFPKE 429
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 430 IQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLDLLNATGKDSLTLVFV 489
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 490 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 549
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 550 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 609
Query: 642 PEL 644
L
Sbjct: 610 SWL 612
>gi|401842749|gb|EJT44825.1| DED1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 609
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 250/431 (58%), Gaps = 26/431 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 130 DDIPVDASGKDVPEPIAEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 189
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 190 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQKKAYPTAVIMAPTRELATQIFDE 248
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
+ KF + +K + GG I Q I +GC++++ATPGRL D LER L+ Y+V
Sbjct: 249 SKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLSNVKYLV 308
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI-YRTTYMFSATMPPAVER 465
LDEADRM+DMGFEPQ+ ++ E+ D + R T MFSAT P ++
Sbjct: 309 LDEADRMLDMGFEPQIRHIV--------------EDCDMTPVGARQTLMFSATFPADIQH 354
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LAR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 355 LARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKR 414
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L +R T +HG ++Q +RE +L FR+ ++LVAT VA RG+DIP+V H
Sbjct: 415 MADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGTASLLVATAVAARGLDIPNVTH 474
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
VINYD+P +++ Y HRIGRTGRAG TGVAT F + ++ L ++L ++N VP L
Sbjct: 475 VINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNSENGNIVKGLHEILTEANQEVPSFL- 533
Query: 646 KHEASKFKPGT 656
+A PG+
Sbjct: 534 -KDAMMSAPGS 543
>gi|443895251|dbj|GAC72597.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 1151
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 252/441 (57%), Gaps = 30/441 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+++M+E R + + I+ +G P+P+ W+ L L ++R+GY +P+PIQ
Sbjct: 447 IDDMSEELANQIRLEMDAITVRGKDCPKPLTKWSHCGLPASCLDVIKRLGYDSPTPIQSQ 506
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IG+A+TGSGKT AF+LPM +I P+ +EGP ++M PTRELA
Sbjct: 507 AIPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPV---ETSEGPVGIIMTPTRELA 563
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F LG++ + GG I EQ +++ ++V+ATPGR+ID L R
Sbjct: 564 VQIYREMRPFIRALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRMIDLLTANSGRVT 623
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSA
Sbjct: 624 NLRRVTYLVLDEADRMFDMGFEPQVMRIVN-----NIRPD------------RQTVLFSA 666
Query: 458 TMPPAVERLARKYLRN-PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL---- 512
T P +E LARK L+N P+ +T+G I Q V + ES KF RL +L E+
Sbjct: 667 TFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRPESSKFHRLLEILGEMYNRE 726
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
D ++FV+ ++ AD + K+L + GY +LHGGK Q R+ ++ F+ ++ AT
Sbjct: 727 KDARTLIFVDRQEAADELLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTATS 786
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VA RG+D+ + VINYD+P ++E Y HR GRTGRAG+ G TF+T D+
Sbjct: 787 VAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFVTPEQDRYARDIIAA 846
Query: 633 LIQSNSPVPPELAKHEASKFK 653
L S + VP EL K A FK
Sbjct: 847 LKASGAHVPVELEKM-AESFK 866
>gi|410342953|gb|JAA40423.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 662
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 244/414 (58%), Gaps = 22/414 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
R+ N+ G+ P+ ++A +L+ + + Y P+PIQ +P+ L RD+I
Sbjct: 233 LRQKLNLRVSGAAPPKLCTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 292
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTAAF+ PML +I E EGP AV++ PTREL QQI E +F
Sbjct: 293 GIAKTGSGKTAAFIWPMLVHIMDQ---KELEPGEGPIAVIVCPTRELCQQIHAECKRFGK 349
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ V++ GG S+ EQ +++G E+V+ TPGRLID ++++ L + Y+V DEADR
Sbjct: 350 AYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADR 409
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M DMGFE QV + +S+++P+ R T +FSAT +ERLAR L
Sbjct: 410 MFDMGFEYQVRSI-----ASHVRPD------------RQTLLFSATFRKKIERLARDILV 452
Query: 473 NPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMV 530
+P+ V G G+A E ++Q V +++ S+K++ L R L E + ++FV K N+D +
Sbjct: 453 DPIRVVQGDIGEANEDVTQVVEILLSGSDKWAWLTRRLVEFTSAGSVLIFVTKKANSDEL 512
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A NL + GY + LHG Q +R + F+ K +LVATDVA RG+DIP + V+NYD
Sbjct: 513 AANLTQEGYSLGLLHGDMDQSERNKVISDFKKKNLPILVATDVAARGLDIPSIRTVVNYD 572
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ +I+ +THRIGRTGRAG+ GVA T LT DT DL + L +N V EL
Sbjct: 573 VARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDTSFAGDLVRNLEGANQAVSKEL 626
>gi|395324143|gb|EJF56589.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1073
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 239/414 (57%), Gaps = 27/414 (6%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I +G PRP+ W+ L L ++++GY P+PIQ AIP + RDVIG+A+T
Sbjct: 402 GIKIRGLDCPRPVTKWSHFGLPASCLEVIKKLGYAAPTPIQAQAIPAIMSGRDVIGVAKT 461
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPM +I P+ + EGP AVVM PTRELA QI E F LG++
Sbjct: 462 GSGKTIAFLLPMFRHIKDQRPL---EQMEGPVAVVMTPTRELAVQIHRECKPFLRVLGLR 518
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
V GG I++Q +++G E+++ TPGR+ID L R L + Y+VLDEADRM
Sbjct: 519 AVCAYGGSPIKDQIAEMKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYLVLDEADRMF 578
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ +++ N++P+ R T +FSAT P ++ LARK LR P
Sbjct: 579 DMGFEPQVMKIVN-----NIRPD------------RQTVLFSATFPRQMDSLARKILRKP 621
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL----DELGDKTAIVFVNTKKNADMV 530
+ +T+G I Q V + E KF+RL +L +E + ++FV+ ++ AD +
Sbjct: 622 LEITVGGRSVVAPEIEQIVEVRDEESKFNRLLEILGQTYNEDPECRTLIFVDRQEGADNL 681
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L + GY +LHGGK Q R+ ++ F++ +++AT VA RG+D+ + VINYD
Sbjct: 682 LRELMRKGYLCMSLHGGKDQVDRDSTIADFKSGVVPIVIATSVAARGLDVKQLKLVINYD 741
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P ++E Y HR GRTGRAG G TF+T D+ + L SN+ VP EL
Sbjct: 742 APNHMEDYVHRAGRTGRAGNKGTCVTFITPEQDRYSVDIYRALKASNAAVPKEL 795
>gi|157819755|ref|NP_001102328.1| uncharacterized protein LOC364073 [Rattus norvegicus]
gi|149040979|gb|EDL94936.1| rCG20177 [Rattus norvegicus]
Length = 659
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 162 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 221
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 222 AQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIY 281
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 282 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 341
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 342 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 386
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 387 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFV 446
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 447 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 506
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 507 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 566
Query: 642 PEL 644
L
Sbjct: 567 SWL 569
>gi|410342951|gb|JAA40422.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 662
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 250/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+ + + ++ ++ Y P+P+Q AIP+ +RD++
Sbjct: 164 DDIPVEATGSNCPPHIENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|409049919|gb|EKM59396.1| hypothetical protein PHACADRAFT_249858 [Phanerochaete carnosa
HHB-10118-sp]
Length = 851
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 246/428 (57%), Gaps = 28/428 (6%)
Query: 225 MTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT+ + + R + + I +G PRP+ W+ L L ++++GY P+PIQ AIP
Sbjct: 166 MTDEEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCLDVIKKLGYAGPTPIQAQAIP 225
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RDVIG+A+TGSGKT AF+LPM +I P+ + EGP AVVM PTRELA QI
Sbjct: 226 AIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQ---MEGPVAVVMTPTRELAVQI 282
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLN 400
E F L ++ V GG I++Q +++G E+++ TPGR+ID L R L
Sbjct: 283 HRECKPFLRVLNLRAVCAYGGSPIKDQIAEMKKGAEIIVCTPGRMIDLLTANSGRVTNLK 342
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+ Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT P
Sbjct: 343 RVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD------------RQTVLFSATFP 385
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL----DELGDKT 516
++ LARK LR P+ +T+G I Q V + E KF+RL +L +E +
Sbjct: 386 KQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRDEDTKFNRLLEILGQTYNEDPESR 445
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
++FV+ ++ AD + + L + GY +LHGGK Q R+ ++ F++ +++AT VA R
Sbjct: 446 TLIFVDRQEAADNLLRELMRKGYLCMSLHGGKDQIDRDQTIADFKSGVVPIVIATSVAAR 505
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + VINYD P ++E Y HR GRTGRAG G TF+T D+ + L S
Sbjct: 506 GLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQDRYSVDIYRALKAS 565
Query: 637 NSPVPPEL 644
N+ VP EL
Sbjct: 566 NAAVPKEL 573
>gi|380810152|gb|AFE76951.1| ATP-dependent RNA helicase DDX3X isoform 2 [Macaca mulatta]
Length = 660
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|410988377|ref|XP_004000462.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Felis catus]
Length = 646
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|350412504|ref|XP_003489670.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Bombus
impatiens]
Length = 605
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 252/436 (57%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG IP P++ + EG P +L + + GY P+ IQ P+ L RD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +VLP + +I P + +GP A+++APTRELAQQI+E F
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQPRLGN---GDGPIALILAPTRELAQQIQEVANCFGE 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 212 AAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 272 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLT 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGD---KTAIVFVNTKKNAD 528
+ + IG+ A I Q V + +E EK +L RLL E+G+ I+FV TK+ D
Sbjct: 315 DYTHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKENKTIIFVETKRKVD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ F++ R +LVATDVA RG+D+ DV +VIN
Sbjct: 375 DITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVAARGLDVDDVKYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ + P L +
Sbjct: 435 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLREAGQNINPRLTEM- 493
Query: 649 ASKFKPGTIPDRPPRR 664
A K G+ R +R
Sbjct: 494 AELAKSGSYGSRSGKR 509
>gi|74006742|ref|XP_861537.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 11 [Canis lupus
familiaris]
Length = 646
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|156053343|ref|XP_001592598.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980]
gi|160419162|sp|A7ENE0.1|PRP5_SCLS1 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|154704617|gb|EDO04356.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1114
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 252/431 (58%), Gaps = 28/431 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +MTE + R + + I G +P+P++ W++ L + L ++++GY P+ IQM
Sbjct: 453 LVDMTEAEINDLRLELDGIKVAGKDVPKPVQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQ 512
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF+LPM +I P+ ++GP ++M PTRELA
Sbjct: 513 AIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL---KNSDGPIGLIMTPTRELA 569
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E F +G++ V GG I++Q +++G E+++ TPGR+I+ L R
Sbjct: 570 TQIHKECKPFLKAMGLRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVT 629
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ V + N++P R T +FSA
Sbjct: 630 NLQRVTYVVLDEADRMFDMGFEPQVMKVFN-----NIRPN------------RQTILFSA 672
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----G 513
TMP ++ LA+K L++PV + +G I+Q V + +E EKF RL LL EL
Sbjct: 673 TMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLELLGELYNADE 732
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
D ++FV+ ++ AD + K+L + GY ++HGGK Q R+ +++ F+ +++AT V
Sbjct: 733 DARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSV 792
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
A RG+D+ + V+N+D P ++E Y HR GRTGRAG TG A TF+T + + L
Sbjct: 793 AARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKAL 852
Query: 634 IQSNSPVPPEL 644
QS VP L
Sbjct: 853 EQSGQEVPERL 863
>gi|307188310|gb|EFN73102.1| Probable ATP-dependent RNA helicase DDX43 [Camponotus floridanus]
Length = 677
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 235/389 (60%), Gaps = 22/389 (5%)
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
PE+LR +++ G+ PSPIQ A P+ L +D+IGIA+TG+GKT AF+LP L +I I
Sbjct: 266 PEILREIQKQGFTKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHID--GQI 323
Query: 320 SEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
+ +E GP +VMAPTRELA QIE+E K++ Y GIK V + GG + +EQ + +G +
Sbjct: 324 TPRDERPGPNVLVMAPTRELALQIEKEVGKYS-YRGIKAVCVYGGGNRKEQINIVTKGVQ 382
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
+VIATPGRL D ++ ++ Y++LDEADRM+DMGFEPQ+ L ++P+
Sbjct: 383 IVIATPGRLNDLVQAGVLNVSAVTYLILDEADRMLDMGFEPQIRKTL-----LGVRPD-- 435
Query: 440 DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKE 498
R T M SAT P V RLA+ Y++NP+ V +G+ A ++Q + M+ E
Sbjct: 436 ----------RQTVMTSATWPQGVRRLAQSYMKNPIQVCVGSLDLAAVHTVTQKICMINE 485
Query: 499 SEKFSRLQRLLDELGD-KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
EK + + E+G IVF K D ++ +L ++HG + Q RE +L
Sbjct: 486 DEKLDMMHQFFREMGSYDKVIVFFGKKAKVDDISSDLALSKIDCQSIHGDREQADREQAL 545
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
E +T +L+ATDVA RGIDI D+ HV+NYD P +IE Y HR+GRTGRAG+TG + TF
Sbjct: 546 EDLKTGAVQILLATDVASRGIDIEDITHVLNYDFPKDIEEYVHRVGRTGRAGRTGESITF 605
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
+T D +L +L ++N VP EL K
Sbjct: 606 MTRQDWHHAKELINILEEANQEVPEELYK 634
>gi|76253275|emb|CAH61467.1| Pl10-related protein [Pelophylax lessonae]
Length = 687
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 250/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++ + + ++ ++ Y P+P+Q AIP+ + +RD++
Sbjct: 207 DDIPVEATGSNCPPHIESFHDVNMGEIIMGNIQLTRYTRPTPVQKHAIPIIIDKRDLMAC 266
Query: 295 AETGSGKTAAFVLPMLTYISRLPPIS-----EENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P ++N G P ++V+APTRELA QI
Sbjct: 267 AQTGSGKTAAFLLPILSQIYADGPGDAMKHLKDNGRYGRRKQFPLSLVLAPTRELAVQIY 326
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 327 EEARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKY 386
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 387 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RQTMMFSATFPKE 431
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 432 IQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLDLLNATGKDSLTLVFV 491
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 492 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 551
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 552 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 611
Query: 642 PEL 644
L
Sbjct: 612 SWL 614
>gi|56696327|ref|YP_166684.1| ATP-dependent RNA helicase RhlE [Ruegeria pomeroyi DSS-3]
gi|56678064|gb|AAV94730.1| ATP-dependent RNA helicase RhlE [Ruegeria pomeroyi DSS-3]
Length = 471
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 232/399 (58%), Gaps = 32/399 (8%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
M ++E L P++L+A+E GY+ P+PIQ AIP L+ RDV+GIA+TG+GKTA+F LPM
Sbjct: 1 MTKFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM 60
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+T ++R A P ++V+ PTRELA Q+ E + +L + ++GG S +E
Sbjct: 61 ITLLAR-----GRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKE 115
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+IATPGRL+D ER +L +V+DEADRM+DMGF P + +
Sbjct: 116 QDALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLT 175
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T FSATM P +ER+ +L P + + A+E I
Sbjct: 176 P-----------------FTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETI 218
Query: 490 SQHVVMMK-------ESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYR 540
Q VV+ K SEK + L+ L+D G+K AI+F N K + D+VAK+L K GY
Sbjct: 219 EQGVVLFKGSRRDREASEKRAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYD 278
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +L+GFR + +LVA+DVA RG+D+P V+HV N+D+PG+ E Y H
Sbjct: 279 AAPIHGDLDQSQRTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVH 338
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
RIGRTGRAG+ G A T D D + LIQ + P
Sbjct: 339 RIGRTGRAGRDGKAITLCIPRDEKAL-DAIEKLIQKDIP 376
>gi|326913476|ref|XP_003203064.1| PREDICTED: ATP-dependent RNA helicase DDX3X-like [Meleagris
gallopavo]
Length = 695
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 200 DDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 259
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 260 AQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 319
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 320 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 379
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 380 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 424
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 425 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFV 484
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 485 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 544
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 545 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 604
Query: 642 PEL 644
L
Sbjct: 605 SWL 607
>gi|327292871|ref|XP_003231133.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
gi|326466763|gb|EGD92216.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
Length = 1180
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/435 (39%), Positives = 249/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +TE + R + + I +G +P P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 517 LAGLTEAEVANIRLELDGIKVRGVDVPTPVQKWSQCGLGVQTLDVIRKLGYERPTSIQSQ 576
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP +V+M PTRELA
Sbjct: 577 AVPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL--EN-MEGPISVIMTPTRELA 633
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 634 TQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVT 693
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P R T +FSA
Sbjct: 694 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----GNIRPN------------RQTVLFSA 736
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L P+ + +G I+Q V + + KF RL LL DE
Sbjct: 737 TFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDE 796
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D +VFV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 797 NEDARTLVFVDRQEAADRLLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILIAT 856
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 857 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 916
Query: 632 MLIQSNSPVPPELAK 646
L QS PVP + K
Sbjct: 917 ALKQSGQPVPEPIQK 931
>gi|410218514|gb|JAA06476.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410268198|gb|JAA22065.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
gi|410304852|gb|JAA31026.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Pan
troglodytes]
Length = 662
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|323302935|gb|EGA56739.1| Ded1p [Saccharomyces cerevisiae FostersB]
Length = 604
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 185
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 186 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 244
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 245 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 305 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 351
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 352 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 411
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 412 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 471
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 472 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 529
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 530 KDAMMSAPGS 539
>gi|383409171|gb|AFH27799.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|383409175|gb|AFH27801.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|383409177|gb|AFH27802.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|383409179|gb|AFH27803.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|383409181|gb|AFH27804.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
gi|383409183|gb|AFH27805.1| ATP-dependent RNA helicase DDX3X isoform 1 [Macaca mulatta]
Length = 662
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLDRGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|389635125|ref|XP_003715215.1| ATP-dependent RNA helicase DED1 [Magnaporthe oryzae 70-15]
gi|152013501|sp|A4RHF1.2|DED1_MAGO7 RecName: Full=ATP-dependent RNA helicase DED1
gi|351647548|gb|EHA55408.1| ATP-dependent RNA helicase DED1 [Magnaporthe oryzae 70-15]
Length = 671
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 252/423 (59%), Gaps = 26/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ ++ L L+ +E YK P+P+Q ++P+ + RD++
Sbjct: 171 DDIPVEASGHDVPEPVYTFSNPPLDDHLISNIELARYKVPTPVQKYSVPIVMGGRDLMAC 230
Query: 295 AETGSGKTAAFVLPMLT--YISRLPPISEENEAEG---------PYAVVMAPTRELAQQI 343
A+TGSGKT F+ P+L+ + + PI N+ G P ++++APTREL QI
Sbjct: 231 AQTGSGKTGGFLFPILSQAFKTGPSPIPATNQGPGGYGRQRKAYPTSLILAPTRELVSQI 290
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCN 403
+E+ KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L
Sbjct: 291 YDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIK 350
Query: 404 YVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
Y+VLDEADRM+DMGFEPQ+ +++ N++ R T MFSAT P +
Sbjct: 351 YLVLDEADRMLDMGFEPQIRRIVEGEDMPNVQD-------------RQTLMFSATFPGYI 397
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE-SEKFSRLQRLLDELGDKTAIVFVN 522
++LAR +L++ + +++G G +E I+Q V+ +K +K S L LL G ++FV
Sbjct: 398 QQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDLLSTHGGGLTLIFVE 457
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TK+NAD ++ L T++HG ++Q +RE +LE FRT R +LVAT VA RG+DIP+
Sbjct: 458 TKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPN 517
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD-TDVFYDLKQMLIQSNSPVP 641
V HVINYD+P +I+ Y HRIGRTGRAG TG+AT F D + V +L +L ++ +P
Sbjct: 518 VTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFDMKDNSGVAQELLNILKEAKQDIP 577
Query: 642 PEL 644
P L
Sbjct: 578 PFL 580
>gi|355750468|gb|EHH54806.1| hypothetical protein EGM_15715 [Macaca fascicularis]
Length = 622
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLEVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEARQKVPPVL 563
>gi|340725165|ref|XP_003400944.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
terrestris]
Length = 605
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 252/436 (57%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG IP P++ + EG P +L + + GY P+ IQ P+ L RD++
Sbjct: 95 FRENAEITIKGDNIPNPIQYFEEGNFPPYVLDEIHKQGYSQPTAIQAQGWPIALSGRDLV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT +VLP + +I P + +GP A+++APTRELAQQI+E F
Sbjct: 155 AIAQTGSGKTLGYVLPAIVHIIHQPRLGN---GDGPIALILAPTRELAQQIQEVANCFGE 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 212 AAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 272 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLT 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGD---KTAIVFVNTKKNAD 528
+ + IG+ A I Q V + +E EK +L RLL E+G+ I+FV TK+ D
Sbjct: 315 DYTHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKENKTIIFVETKRKVD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ F++ R +LVATDVA RG+D+ DV +VIN
Sbjct: 375 DITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVAARGLDVDDVKYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ + P L +
Sbjct: 435 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLREAGQNINPRLTEM- 493
Query: 649 ASKFKPGTIPDRPPRR 664
A K G+ R +R
Sbjct: 494 AELAKSGSYGSRSGKR 509
>gi|323346404|gb|EGA80692.1| Ded1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762883|gb|EHN04415.1| Ded1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 608
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 130 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 189
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 190 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 248
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 249 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 308
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 309 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 355
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 356 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 415
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 416 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 475
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 476 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 533
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 534 KDAMMSAPGS 543
>gi|66800707|ref|XP_629279.1| hypothetical protein DDB_G0293168 [Dictyostelium discoideum AX4]
gi|74896763|sp|Q54CE0.1|DDX17_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx17; AltName:
Full=DEAD box protein 17
gi|60462734|gb|EAL60936.1| hypothetical protein DDB_G0293168 [Dictyostelium discoideum AX4]
Length = 785
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 257/431 (59%), Gaps = 30/431 (6%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ + T+ + FR F ++ KG ++P P+ + + L++ + G+ NP+PIQ A
Sbjct: 355 VSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQA 414
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IG+A+TGSGKT AF+LP + +I+ P + E+ +GP +V+APTRELA
Sbjct: 415 WPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRED---DGPIVLVLAPTRELAL 471
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI+EET KF I + GG S Q +++G E+VIATPGRLID LE L +
Sbjct: 472 QIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRR 531
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T MFSAT P
Sbjct: 532 VTYLVLDEADRMLDMGFEPQIRKII-----SQIRPD------------RQTLMFSATWPK 574
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFSRLQRLLDELG----DK 515
V+ LA +L + + V IG +TE+ + H V +++ + F + +R+L LG D+
Sbjct: 575 EVQALAHDFLTDHIQVHIG----STEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDE 630
Query: 516 TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
IVF T+K D + + L G++ +HG KSQ +R+ L F+ +++ATDVA
Sbjct: 631 KVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVAS 690
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+DI D+ +V+NYD P IE+Y HRIGRT RAG +GV+ + LT + + +L ++L +
Sbjct: 691 RGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELIKVLTE 750
Query: 636 SNSPVPPELAK 646
+ +P EL+
Sbjct: 751 AKQKIPIELSN 761
>gi|398365729|ref|NP_014847.3| Ded1p [Saccharomyces cerevisiae S288c]
gi|118411|sp|P06634.2|DED1_YEAST RecName: Full=ATP-dependent RNA helicase DED1; AltName: Full=DEAD
box protein 1
gi|3647|emb|CAA40546.1| Ded1p (Spp81p) [Saccharomyces cerevisiae]
gi|1420479|emb|CAA99419.1| DED1 [Saccharomyces cerevisiae]
gi|285815083|tpg|DAA10976.1| TPA: Ded1p [Saccharomyces cerevisiae S288c]
Length = 604
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 185
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 186 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 244
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 245 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 305 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 351
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 352 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 411
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 412 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 471
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 472 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 529
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 530 KDAMMSAPGS 539
>gi|157130314|ref|XP_001661885.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108871945|gb|EAT36170.1| AAEL011744-PA [Aedes aegypti]
Length = 619
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/553 (35%), Positives = 293/553 (52%), Gaps = 49/553 (8%)
Query: 112 KKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGM--DRREQKKLA 169
K++++K + + + N +S + +N EA +GR F + E KK+A
Sbjct: 41 KQQLLKMGRIVQLTAEASNVGKSSSENEHDDENAEEA---WGRKFNISLLDQHTELKKIA 97
Query: 170 -----AKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LE 223
+ EK+++EE + E V EK A + + E A + ++ + W + +
Sbjct: 98 EAKKISAVEKQLKEEEKILESVAEK---KALMGVAELAKGI--QYEDPIKTSWKPPRYIL 152
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
T+ RE I G +P P+ ++ E K +L A+E+ + PSPIQ+ IP
Sbjct: 153 SRTDASHERVREKMRILVDGENVPPPICSFREMKFPKAILAALEKRNIRKPSPIQVQGIP 212
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYIS----RLPPISEENEAEGPYAVVMAPTREL 339
L RD+IGIA TGSGKT FVLP++ + RLP IS+E GPY +++ P+REL
Sbjct: 213 AVLSGRDLIGIAFTGSGKTLVFVLPIVMFSLEQELRLPFISKE----GPYGLIICPSREL 268
Query: 340 AQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
A+Q + + +L I+ +GG + + I+QGC +++ATPGRL+D L+
Sbjct: 269 AKQTHDIIQYYCQHLQMSGMPEIRSALAIGGVPVNDALATIQQGCHIMVATPGRLMDMLD 328
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
++ L+ C Y+ +DEADRMID GFE + + R T
Sbjct: 329 KKLLKLDVCRYLCMDEADRMIDAGFEEDIRTIFSYFKGQ-----------------RQTL 371
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG 513
+FSATMP ++ A+ L PV + +G AG A+ ++Q V +K+ K L L +
Sbjct: 372 LFSATMPKKIQNFAKSALVKPVTINVGRAGAASMNVTQDVEYVKQEAKVVYLLDCLQKT- 430
Query: 514 DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
++F K++ D + + L G +HGGK QE+R S+EGFR + +VLVATDV
Sbjct: 431 PPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERYRSVEGFRNQEKDVLVATDV 490
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQM 632
A +G+D PDV HVINYDMP +IE Y HRIGRTGR+G G+ATTF+ + V DLK +
Sbjct: 491 ASKGLDFPDVQHVINYDMPDDIENYVHRIGRTGRSGSKGLATTFINKATEQFVLLDLKHL 550
Query: 633 LIQSNSPVPPELA 645
LI++ VPP L
Sbjct: 551 LIEAKQKVPPFLG 563
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 255/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + I+ KG P+P+++W + ++ ++L ++++ GY+ P+PIQ
Sbjct: 338 LAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQ 397
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IGIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 398 AIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMGQRSLEE---GEGPIAVIMTPTRELA 454
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 455 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 514
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N+ P+ R T MFSA
Sbjct: 515 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVHPD------------RQTVMFSA 557
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E L + L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 558 TFPRAMEALTSRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 617
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 618 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 677
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 678 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 737
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 738 GTAVPPDLEK 747
>gi|303288181|ref|XP_003063379.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455211|gb|EEH52515.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 513
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 255/424 (60%), Gaps = 18/424 (4%)
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
E T D+ + ED + G P P+ ++ + + + + R +KNP+P+Q AIP
Sbjct: 27 ESTAIDFDAY-EDIPVETSGEACPEPIASFQDVDFGAAVNKNIARCKFKNPTPVQKYAIP 85
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQ 341
+ L +RD++ A+TGSGKTAAF P++ + L P A+V+APTRELA
Sbjct: 86 ISLARRDLMACAQTGSGKTAAFCFPIIYGLLDRGLAGSQRGGRKTFPLALVIAPTRELAI 145
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI EE+ KFA+ G+ I GG +Q + +GC++++ATPGRLID ++R L++
Sbjct: 146 QIHEESRKFAYQTGVASCVIYGGAPAAQQFREMERGCDILVATPGRLIDLVDRAKISLSE 205
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+ LDEADRM+DMGFEPQ+ +++ ++ P E R T +FSAT P
Sbjct: 206 VRYLALDEADRMLDMGFEPQIRQIVE---QRDMPPTGE----------RQTMLFSATFPR 252
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-KFSRLQRLLDELGDKTAIVF 520
++R+A +L++ + +T+G G + LI+Q + ++ E K S L L+ + T +VF
Sbjct: 253 EIQRMASDFLKDYIFLTVGRVGSSHTLITQQIEYLRSYEDKKSMLMDLVHAVKGLT-LVF 311
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
V TK+ AD + L + G+ T++HG ++Q++RE +L+ FR+ R +LVATDVA RG+DI
Sbjct: 312 VETKRGADQLEDWLSREGFPSTSIHGDRTQQEREYALKSFRSGRTPILVATDVAARGLDI 371
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
P V HVIN+D+P +I+ Y HRIGRTGRAGK G+AT F T D + + +++ ++ V
Sbjct: 372 PHVTHVINFDLPSDIDDYVHRIGRTGRAGKKGLATAFFTDKDAGLARSMIELMTEAGQEV 431
Query: 641 PPEL 644
P L
Sbjct: 432 PSFL 435
>gi|71895253|ref|NP_001025971.1| ATP-dependent RNA helicase DDX3X [Gallus gallus]
gi|60098425|emb|CAH65043.1| hypothetical protein RCJMB04_2a4 [Gallus gallus]
Length = 651
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 156 DDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 215
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 216 AQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 275
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 276 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 335
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 336 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 380
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 381 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFV 440
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 441 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 500
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 501 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 560
Query: 642 PEL 644
L
Sbjct: 561 SWL 563
>gi|417411927|gb|JAA52382.1| Putative dead-box protein abstrakt, partial [Desmodus rotundus]
Length = 611
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 113 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 172
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 173 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 232
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 233 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 292
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 293 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 337
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 338 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 397
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 398 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 457
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 458 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 517
Query: 642 PEL 644
L
Sbjct: 518 SWL 520
>gi|224141279|ref|XP_002324002.1| predicted protein [Populus trichocarpa]
gi|222867004|gb|EEF04135.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 243/416 (58%), Gaps = 27/416 (6%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R I+ G ++P P+ ++ E+L+ V + G+ +P+PIQ + P+ LQ RD++
Sbjct: 136 YRRRHEITVTGDEVPPPLTSFEATGFPSEILKEVLKAGFSSPTPIQAQSWPVALQSRDIV 195
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
+A+TGSGKT +++P ++ R + GP +V++PTRELA QI++E VKF
Sbjct: 196 AVAKTGSGKTLGYLIPGFIHLKRC----RNDPQLGPTVLVLSPTRELATQIQDEAVKFGK 251
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I + GG Q + +G ++V+ATPGRL D LE R LNQ Y+VLDEADR
Sbjct: 252 SSRISCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMRRVSLNQVKYLVLDEADR 311
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ +P+ R T M++AT P V ++A L
Sbjct: 312 MLDMGFEPQIRKIVKEVPAR-----------------RQTLMYTATWPKEVRKIAADLLV 354
Query: 473 NPVVVTIGTAGK--ATELISQHVVMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNAD 528
NPV V IG + A + I+QHV ++ EK RL+++L E G K I+F +TKK D
Sbjct: 355 NPVQVNIGNIDELVANKSITQHVELLAPLEKHRRLEQILRSQEPGSKI-IIFCSTKKMCD 413
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+A+NL + + +HG KSQ +R+ L FRT R +LVATDVA RG+DI D+ V+N
Sbjct: 414 QLARNLTRQ-FGAAAIHGDKSQSERDHVLSQFRTGRSPILVATDVAARGLDIKDIRVVVN 472
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
YD P +E Y HRIGRTGRAG TGVA TF D DL ++L +N VPPE+
Sbjct: 473 YDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGANQLVPPEI 528
>gi|355683287|gb|AER97075.1| DEAD box polypeptide 3, X-linked [Mustela putorius furo]
Length = 595
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 171 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 230
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++++APTRELA QI
Sbjct: 231 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLILAPTRELAVQIY 290
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 291 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 350
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 351 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGI---------------RHTMMFSATFPKE 395
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 396 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 455
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 456 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 515
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 516 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 575
Query: 642 PEL 644
L
Sbjct: 576 SWL 578
>gi|440468040|gb|ELQ37225.1| ATP-dependent RNA helicase ded-1 [Magnaporthe oryzae Y34]
gi|440487534|gb|ELQ67318.1| ATP-dependent RNA helicase ded-1 [Magnaporthe oryzae P131]
Length = 665
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/423 (38%), Positives = 252/423 (59%), Gaps = 26/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ ++ L L+ +E YK P+P+Q ++P+ + RD++
Sbjct: 165 DDIPVEASGHDVPEPVYTFSNPPLDDHLISNIELARYKVPTPVQKYSVPIVMGGRDLMAC 224
Query: 295 AETGSGKTAAFVLPMLT--YISRLPPISEENEAEG---------PYAVVMAPTRELAQQI 343
A+TGSGKT F+ P+L+ + + PI N+ G P ++++APTREL QI
Sbjct: 225 AQTGSGKTGGFLFPILSQAFKTGPSPIPATNQGPGGYGRQRKAYPTSLILAPTRELVSQI 284
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCN 403
+E+ KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L
Sbjct: 285 YDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIK 344
Query: 404 YVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
Y+VLDEADRM+DMGFEPQ+ +++ N++ R T MFSAT P +
Sbjct: 345 YLVLDEADRMLDMGFEPQIRRIVEGEDMPNVQD-------------RQTLMFSATFPGYI 391
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE-SEKFSRLQRLLDELGDKTAIVFVN 522
++LAR +L++ + +++G G +E I+Q V+ +K +K S L LL G ++FV
Sbjct: 392 QQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDLLSTHGGGLTLIFVE 451
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TK+NAD ++ L T++HG ++Q +RE +LE FRT R +LVAT VA RG+DIP+
Sbjct: 452 TKRNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPN 511
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD-TDVFYDLKQMLIQSNSPVP 641
V HVINYD+P +I+ Y HRIGRTGRAG TG+AT F D + V +L +L ++ +P
Sbjct: 512 VTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFDMKDNSGVAQELLNILKEAKQDIP 571
Query: 642 PEL 644
P L
Sbjct: 572 PFL 574
>gi|14861844|ref|NP_149068.1| putative ATP-dependent RNA helicase Pl10 [Mus musculus]
gi|130256|sp|P16381.1|DDX3L_MOUSE RecName: Full=Putative ATP-dependent RNA helicase Pl10
gi|200389|gb|AAA39942.1| PL10 protein [Mus musculus]
gi|26325502|dbj|BAC26505.1| unnamed protein product [Mus musculus]
gi|148681106|gb|EDL13053.1| DNA segment, Chr 1, Pasteur Institute 1 [Mus musculus]
gi|223460348|gb|AAI39288.1| DNA segment, Chr 1, Pasteur Institute 1 [Mus musculus]
gi|223461116|gb|AAI39287.1| DNA segment, Chr 1, Pasteur Institute 1 [Mus musculus]
Length = 660
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 163 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|320583085|gb|EFW97301.1| ATP-dependent RNA helicase DED1 [Ogataea parapolymorpha DL-1]
Length = 2471
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 250/411 (60%), Gaps = 26/411 (6%)
Query: 243 GSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKT 302
G +P P+ + L P L+ +++ + P+P+Q +IP+ RD++ A+TGSGKT
Sbjct: 127 GDDVPEPITEFTSPPLDPLLVENIKQARFTKPTPVQKYSIPIVANGRDLMACAQTGSGKT 186
Query: 303 AAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEETVKFAHYL 354
F+ P+L+ + P +E ++ + P A+V+APTREL QI EE KF++
Sbjct: 187 GGFLFPVLSESFKHGP-TESSQTDNAFDRRKAHPTALVLAPTRELVSQIYEEARKFSYRS 245
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ V + GG + Q +++QGC++++ATPGRL D LER L Y+VLDEADRM+
Sbjct: 246 WVRPVVVYGGAEVYLQMDQLKQGCDLLVATPGRLNDLLERGKISLKNIKYLVLDEADRML 305
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE Q+ ++ ++ P E R T MFSAT P ++ +A+ +L N
Sbjct: 306 DMGFEIQIRHIIQG---CDMPPPGE----------RQTLMFSATFPKEIQLMAKDFLHNY 352
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL----DELGDKTAIVFVNTKKNADMV 530
+ +++G G +E I+Q ++ +++ EK S L +L D L + ++FV TKK AD++
Sbjct: 353 IFLSVGRVGSTSENITQRILYVEDDEKKSSLLDILTSTEDTLANGLTLIFVETKKMADIL 412
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L + T++HG +SQ +RE +LE FRT R +LVAT VA RG+DIP+V HV+NYD
Sbjct: 413 SDFLINQDFPATSIHGDRSQYERERALESFRTGRTPILVATAVAARGLDIPNVTHVVNYD 472
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+P +I+ Y HRIGRTGRAG TGVAT F+ + +V DL ++L ++N VP
Sbjct: 473 LPNDIDDYVHRIGRTGRAGNTGVATAFVNRGNKNVVKDLIEILSEANQEVP 523
>gi|440911262|gb|ELR60957.1| ATP-dependent RNA helicase DDX3X, partial [Bos grunniens mutus]
Length = 673
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 175 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 234
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 235 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 294
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 295 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 354
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 355 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 399
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 400 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 459
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT V+ RG+DI
Sbjct: 460 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVSARGLDIS 519
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 520 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 579
Query: 642 PEL 644
L
Sbjct: 580 SWL 582
>gi|326482407|gb|EGE06417.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
equinum CBS 127.97]
Length = 1182
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 249/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +TE + R + + I +G +P P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 518 LAGLTEAEVTNIRLELDGIKVRGVDVPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQ 577
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP +++M PTRELA
Sbjct: 578 AVPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL--EN-MEGPISLIMTPTRELA 634
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 635 TQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVT 694
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P R T +FSA
Sbjct: 695 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----GNIRPN------------RQTVLFSA 737
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L P+ + +G I+Q V + + KF RL LL DE
Sbjct: 738 TFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDE 797
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D +VFV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 798 NEDARTLVFVDRQEAADRLLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILIAT 857
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 858 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 917
Query: 632 MLIQSNSPVPPELAK 646
L QS PVP + K
Sbjct: 918 ALKQSGQPVPEPIQK 932
>gi|323307275|gb|EGA60555.1| Ded1p [Saccharomyces cerevisiae FostersO]
Length = 605
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 127 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 186
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 187 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 245
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 246 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 305
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 306 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 352
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 353 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 412
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 413 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 472
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 473 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 530
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 531 KDAMMSAPGS 540
>gi|160380641|sp|A6ZP47.1|DED1_YEAS7 RecName: Full=ATP-dependent RNA helicase DED1
gi|151945294|gb|EDN63537.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190407515|gb|EDV10782.1| hypothetical protein SCRG_01592 [Saccharomyces cerevisiae RM11-1a]
gi|207341041|gb|EDZ69208.1| YOR204Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269590|gb|EEU04872.1| Ded1p [Saccharomyces cerevisiae JAY291]
gi|323335425|gb|EGA76711.1| Ded1p [Saccharomyces cerevisiae Vin13]
gi|323352139|gb|EGA84676.1| Ded1p [Saccharomyces cerevisiae VL3]
Length = 604
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 185
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 186 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 244
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 245 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 305 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 351
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 352 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 411
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 412 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 471
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 472 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 529
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 530 KDAMMSAPGS 539
>gi|157820683|ref|NP_001101516.1| probable ATP-dependent RNA helicase DDX41 [Rattus norvegicus]
gi|149039854|gb|EDL93970.1| rCG24134 [Rattus norvegicus]
gi|187469705|gb|AAI66825.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Rattus norvegicus]
Length = 622
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/471 (37%), Positives = 263/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E KL +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|156389356|ref|XP_001634957.1| predicted protein [Nematostella vectensis]
gi|156222046|gb|EDO42894.1| predicted protein [Nematostella vectensis]
Length = 794
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/445 (38%), Positives = 257/445 (57%), Gaps = 27/445 (6%)
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELL 263
+Y F R D + +L +MT + FR NI +G P+P++ WA+ + ++L
Sbjct: 92 VYQPF--RKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKIL 149
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEEN 323
+++ Y+ P+PIQ AIP+ + RD+IGIA+TGSGKT AF++PM +I PP+ E
Sbjct: 150 DVLKKNSYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHIKDQPPLERE- 208
Query: 324 EAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIA 383
EGP A+VM PTRELA QI E KF ++ V + GG I EQ +++G E+++
Sbjct: 209 --EGPIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVC 266
Query: 384 TPGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
TPGR+ID L R +C Y+VLDEADRM DMGFEPQV+ ++D ++P+
Sbjct: 267 TPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQVMRIIDC-----IRPD--- 318
Query: 441 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE 500
R T MFSAT P +E LARK L P+ + +G + Q+VV+++E +
Sbjct: 319 ---------RQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQNVVVIEEDD 369
Query: 501 KFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEG 559
KF +L LL ++ + +VFV + +AD + K+L K Y +LHGG Q R+ ++
Sbjct: 370 KFLKLLELLGLYQEQGSVLVFVEKQDSADSLFKDLLKRSYPCLSLHGGMDQFDRDSTIAD 429
Query: 560 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
F+ +++AT VA RG+D+ + V+NYD P + E Y HR+GRTGRAG G A TFLT
Sbjct: 430 FKNGVTKLMIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLT 489
Query: 620 FHDTDVFYDLKQMLIQSNSPVPPEL 644
D+ + L + +PVP ++
Sbjct: 490 PEQGRFAIDVIKALEMAENPVPEDV 514
>gi|47217820|emb|CAG07234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 737
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 244/414 (58%), Gaps = 22/414 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
R+ N+ G+ P+P ++A +L+ + + Y P+PIQ +P+ L RD+I
Sbjct: 83 LRQKLNLRVSGAAPPKPSTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 142
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTAAF+ PML +I E EGP AV++ PTREL QQI E +F
Sbjct: 143 GIAKTGSGKTAAFIWPMLVHIMDQ---KELEAGEGPIAVIVCPTRELCQQIHAECKRFGK 199
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ V++ GG S+ EQ +++G E+V+ TPGRLID ++++ L + Y+V DEADR
Sbjct: 200 AYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADR 259
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M DMGFE QV + +S+++P+ R T +FSAT +ERLAR L
Sbjct: 260 MFDMGFEYQVRSI-----ASHVRPD------------RQTLLFSATFRKKIERLARDILV 302
Query: 473 NPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDEL-GDKTAIVFVNTKKNADMV 530
+P+ V G G+A E ++Q V +++ S+K+S L R L E + ++FV K N++ +
Sbjct: 303 DPIRVVQGDIGEANEDVTQVVELLLSGSDKWSWLTRRLVEFTSSGSVLIFVTKKTNSEEL 362
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A NL + GY + LHG Q +R + F+ +LVATDVA RG+DIP + V+NYD
Sbjct: 363 ATNLTQEGYSLGLLHGDMDQSERNKVISDFKKSNMPILVATDVAARGLDIPSIRTVVNYD 422
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ +I+ +THRIGRTGRAG+ GVA T LT D+ DL + L +N V EL
Sbjct: 423 VARDIDTHTHRIGRTGRAGEKGVAYTLLTSKDSSFAGDLVRNLEGANQAVSKEL 476
>gi|349581361|dbj|GAA26519.1| K7_Ded1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 604
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 185
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 186 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 244
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 245 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 305 LDEADRMLDMGFEPQIRHIVE---DCDMTPIGE----------RQTLMFSATFPADIQHL 351
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 352 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 411
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 412 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 471
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 472 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 529
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 530 KDAMMSAPGS 539
>gi|334311247|ref|XP_001381058.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Monodelphis
domestica]
Length = 617
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHW-SEKKLEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W + + + M+E R+ ++I +G
Sbjct: 112 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWKAPRYVLSMSEARHDRVRKKYHILVEGE 169
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 170 GIPPPLKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 229
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 230 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 285
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 286 PLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 345
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 346 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 388
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 389 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 447
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 448 LLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 507
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 508 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 558
>gi|383416199|gb|AFH31313.1| ATP-dependent RNA helicase DDX3X isoform 2 [Macaca mulatta]
Length = 660
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLDRGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|443729238|gb|ELU15222.1| hypothetical protein CAPTEDRAFT_167508 [Capitella teleta]
Length = 1000
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 245/419 (58%), Gaps = 25/419 (5%)
Query: 233 FREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
R D +I +G P P++ WA+ ++ +++ ++R + P+PIQ A+P + RD+
Sbjct: 319 LRTDLESIKVRGKGCPNPVKTWAQCGVSKKVMDCLKRNNFDKPTPIQSQAVPAIMSGRDI 378
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
IGIA TGSGKT AF+LP+ ++ P E + +GP V++ PTRELA QI + KF
Sbjct: 379 IGIARTGSGKTLAFLLPLFRHVLDQP---EMEDGDGPIGVILTPTRELAMQIAADARKFT 435
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLD 408
L ++VV + GG I EQ +++G E+++ TPGR+ID L R L +C Y+VLD
Sbjct: 436 RSLNLRVVCVYGGTGISEQIAELKRGSEIIVCTPGRMIDMLAANSGRVTNLRRCTYIVLD 495
Query: 409 EADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLAR 468
EADRM DMGFEPQV+ ++D N++P+ R T MFSAT P +E LAR
Sbjct: 496 EADRMFDMGFEPQVMRIID-----NIRPD------------RQTVMFSATFPRQMEALAR 538
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNA 527
+ L+ P+ V +G + Q+V +++E +K +L LL ++ + +VFV+ +++A
Sbjct: 539 RILQKPIEVQVGGRSVVCSDVEQYVCVLEEEQKLFKLLELLGVYQEQGSVLVFVDKQEHA 598
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + KNL Y LHGG Q R+ ++ F+ +LVAT VA RG+D+ D+ V+
Sbjct: 599 DDLMKNLLGHSYPCMALHGGIDQYDRDSTIVDFKAGNVTLLVATSVAARGLDVKDLVLVV 658
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
NYD P + E Y HR GRTGRAG+ G A TF+T+ ++ + + S + V PE+ +
Sbjct: 659 NYDCPNHYEDYVHRCGRTGRAGRHGYAYTFMTYEQARYAGEIIKAMELSGANVTPEVVQ 717
>gi|392296531|gb|EIW07633.1| Ded1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 631
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 153 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 212
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 213 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 271
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 272 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 331
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 332 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 378
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 379 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 438
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 439 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 498
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 499 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 556
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 557 KDAMMSAPGS 566
>gi|452824515|gb|EME31517.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 624
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 260/447 (58%), Gaps = 28/447 (6%)
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRI-FREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
D F + H+ ++ +E T +D + GS P + ++ E L +L
Sbjct: 124 DPFKGNENNHFQDEDIEPGTTTGINFDHYDDIPVEISGSDCPDEVLSFDESNLHSRILTN 183
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRL---PPISEE 322
V+ Y P+P+Q AIP+ L RD++ A+TGSGKTAAF+LP + + ++ P+ E+
Sbjct: 184 VKLSNYLKPTPVQKNAIPVILNGRDMMACAQTGSGKTAAFLLPTIHNMLKMGGPAPVPEK 243
Query: 323 ------NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQ 376
++ + P +V+APTRELA QI +E KF + GI I GG +I Q + +
Sbjct: 244 PLDRGYSKIQFPTTLVLAPTRELAMQIYQEARKFCYCTGIIPCVIYGGINIRIQFESVAK 303
Query: 377 GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD--AMPSSNL 434
GC++++ATPGRL+D +ER L +++LDEADRM+DMGFEPQ+ +++ MP++
Sbjct: 304 GCDILVATPGRLVDMIERGKISLMNIKFLILDEADRMLDMGFEPQIRQIVERTDMPTTG- 362
Query: 435 KPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV 494
R T MFSAT P ++RLA +L + + + +G G T+ I Q +
Sbjct: 363 --------------ERQTLMFSATFPKEIQRLASDFLYDYIFLAVGRVGSTTDFILQRLE 408
Query: 495 MMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
++E EK L L+D + T ++F+ TK+ AD + L + GY ++HG +SQ +RE
Sbjct: 409 RVEEHEKRDFLLNLIDTVSGLT-LIFMQTKRGADELEYFLTRKGYPAISIHGDRSQVERE 467
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L FRT R +LVATDVA RG+DIP+V HV+N+DMP +++ Y HRIGRTGRAG +G+A
Sbjct: 468 EALHSFRTGRTPILVATDVAARGLDIPNVTHVVNFDMPTDVDDYVHRIGRTGRAGNSGLA 527
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVP 641
T FL ++ + L +LI+S VP
Sbjct: 528 TAFLNDNNIGIARSLIDILIESGQEVP 554
>gi|62740097|gb|AAH94097.1| Unknown (protein for MGC:115016) [Xenopus laevis]
Length = 695
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++ + + ++ ++ Y P+P+Q AIP+ +++RD++
Sbjct: 203 DDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMAC 262
Query: 295 AETGSGKTAAFVLPMLTYISRLPPIS-----EENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 263 AQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIY 322
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 323 EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 382
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 383 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RQTMMFSATFPKE 427
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 428 IQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLDLLNATGKDSLTLVFV 487
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 488 ETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 547
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 548 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVP 607
Query: 642 PEL 644
L
Sbjct: 608 SWL 610
>gi|86570094|ref|NP_001033411.1| Protein F53H1.1 [Caenorhabditis elegans]
gi|351063534|emb|CCD71734.1| Protein F53H1.1 [Caenorhabditis elegans]
Length = 970
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 273/493 (55%), Gaps = 60/493 (12%)
Query: 166 KKLAAKNEKEMREEIRKKEGV-----EEKPE----------------------EAAALKL 198
K++A KN K+ +K G+ EEKPE E AA L
Sbjct: 184 KEIATKNAKKTGNSTQKASGIVTIVQEEKPEPEKGQVLENEDNMDMVIDDFDIETAAASL 243
Query: 199 KEEAADLYDTFDMRV-------DRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPM 250
+ L T +V + + +++ MT+ + + +RE+ + I+ KG P+P+
Sbjct: 244 CHKGRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPI 303
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
+ WA+ + +++ +++ Y P+ IQ AIP + RDVIGIA+TGSGKT AF+LPM
Sbjct: 304 KTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMF 363
Query: 311 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
+I P E E +GP AV++APTRELA Q +E KFA LG+KV GG I EQ
Sbjct: 364 RHILDQP---ELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQ 420
Query: 371 GFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD 427
+++G E+V+ TPGR+ID L + L + Y+VLDEADRM D GFEPQ++ V++
Sbjct: 421 IADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVN 480
Query: 428 AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE 487
N++P+ + T +FSAT P +E LARK L PV + +G
Sbjct: 481 -----NIRPD------------KQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCS 523
Query: 488 LISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYR-VTTLH 545
I+Q+ V+ E +KF +L LL ++ ++IVFV+ ++ AD + L + GY V LH
Sbjct: 524 DITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLH 583
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
GG Q R+ S+ F+T VLVAT VA RG+D+ ++ V+NYD P + E Y HR+GRT
Sbjct: 584 GGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRT 643
Query: 606 GRAGKTGVATTFL 618
GRAG+ G A TF+
Sbjct: 644 GRAGRKGYAYTFV 656
>gi|324502742|gb|ADY41204.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 973
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 255/440 (57%), Gaps = 24/440 (5%)
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVG 270
R D + +L +MT+++ +RE+ +I +G P+P+R+WA+ + ++L ++++
Sbjct: 273 FRKDFYVETAELAKMTKKEVDQYREELDIRVRGKNCPKPVRSWAQCGVEWKILNTLKKLE 332
Query: 271 YKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYA 330
Y P+ IQ AIP + RDVIGIA+TGSGKT AF+LPM +I P E E +GP A
Sbjct: 333 YTKPTAIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHIMDQP---ELEELDGPIA 389
Query: 331 VVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLID 390
V+M+PTRELA Q +E KFA L I+V + GG I +Q +++G EV++ T GRL D
Sbjct: 390 VIMSPTRELAMQTWKEANKFAKPLNIRVACVYGGVGISDQIGDLKRGAEVIVCTVGRLTD 449
Query: 391 CL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKR 447
L + + L + Y+VLDEADRM DMGFEPQV+ +++ N++P+
Sbjct: 450 MLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD---------- 494
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
R T +FSAT P +E LARK L PV + +G + +SQ+VV+++E +K +L
Sbjct: 495 --RQTVLFSATFPRQMEALARKILDKPVEILVGGKSVVCDDVSQNVVILEEHQKMLKLLE 552
Query: 508 LLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
LL + +VFV+ ++ AD + L + GY LHGG Q R+ ++ F+ +
Sbjct: 553 LLGVYWEHGNVLVFVDKQEKADELVAQLMRSGYNCAPLHGGIDQFDRDSTILDFKAAKIK 612
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+LVAT VA RG+D+ + V+NYD P + E Y HR+GRTGRAG G A TF+ H +
Sbjct: 613 LLVATSVAARGLDVKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYTFILPHGQERM 672
Query: 627 YDLKQMLIQSNSPVPPELAK 646
++ S PPE K
Sbjct: 673 AGEVCRAFETASKEPPEQLK 692
>gi|315042594|ref|XP_003170673.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
gi|311344462|gb|EFR03665.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
Length = 1183
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 249/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +TE + R + + I +G +P P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 520 LAGLTEAEVANIRLELDGIKVRGVDVPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQ 579
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP +++M PTRELA
Sbjct: 580 AVPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL--EN-MEGPISLIMTPTRELA 636
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 637 TQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVT 696
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P R T +FSA
Sbjct: 697 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----GNIRPN------------RQTVLFSA 739
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L P+ + +G I+Q V + + KF RL LL DE
Sbjct: 740 TFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDE 799
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D +VFV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 800 NEDARTLVFVDRQEAADRLLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILIAT 859
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 860 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 919
Query: 632 MLIQSNSPVPPELAK 646
L QS PVP + K
Sbjct: 920 ALKQSGQPVPEPVQK 934
>gi|395518706|ref|XP_003763500.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Sarcophilus
harrisii]
Length = 648
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPQKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGEDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDRNANITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|401402766|ref|XP_003881329.1| hypothetical protein NCLIV_043620 [Neospora caninum Liverpool]
gi|325115741|emb|CBZ51296.1| hypothetical protein NCLIV_043620 [Neospora caninum Liverpool]
Length = 673
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/455 (38%), Positives = 243/455 (53%), Gaps = 46/455 (10%)
Query: 208 TFDMRVDRHWS-EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAV 266
+ R+ W K MT + RE F I G P P RN+ + + +L+ +
Sbjct: 180 VYTSRMQSTWRLPDKYAGMTLAEANEVRERFFIDVSGEDPPPPFRNFKDMRFPQPILKGL 239
Query: 267 ERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML-------TYISRLPPI 319
+ G P+ IQM IP LQ RD+IGIA TGSGKT F LPM+ T + LP
Sbjct: 240 QERGISFPTQIQMQGIPAILQGRDIIGIAFTGSGKTLVFSLPMIMGALESETRAAYLP-- 297
Query: 320 SEENEAEGPYAVVMAPTRELAQQIEEETVKFAH------YLGIKVVSIVGGQSIEEQGFR 373
EGP+ +V+ P+RELA Q + F Y ++ + ++GG S+ EQ
Sbjct: 298 -----GEGPFGLVVCPSRELASQTNDVCSFFCKKLEEGGYPALRCLCVIGGCSVVEQARE 352
Query: 374 IRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSN 433
+RQG ++ATPGRL D L +R L QC Y+ DEADRM+DMGFE +V VLD+
Sbjct: 353 VRQGVHCIVATPGRLTDMLNKRRLSLQQCEYLCFDEADRMVDMGFEEEVRNVLDSFGHQ- 411
Query: 434 LKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV 493
R T +FSATMP ++ A+ L +P+VV +G AG A + Q V
Sbjct: 412 ----------------RQTLLFSATMPRKIQEFAKSALIDPLVVNVGRAGAANLDVVQEV 455
Query: 494 VMMKESEKFSRLQRLLDELGDKTA---IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQ 550
+K+ K L L KTA ++F KK+ D + + L G +HGG +Q
Sbjct: 456 EYVKQENKLPYLLHCLQ----KTAPPVLIFCENKKDVDDIQEYLLLKGVDAAAVHGGLAQ 511
Query: 551 EQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGK 610
E+R ++ FR R +VLV TDVA +G+D P + HVIN+DMP IE Y HRIGRTGR G+
Sbjct: 512 EERSDAVRAFREGRKDVLVGTDVASKGLDFPAIQHVINFDMPKEIENYVHRIGRTGRCGR 571
Query: 611 TGVATTFLTFHDTD-VFYDLKQMLIQSNSPVPPEL 644
TGVATTF+ + + V DLK +LI++ +PP L
Sbjct: 572 TGVATTFVNKNQEETVLLDLKALLIEAGQRIPPFL 606
>gi|326476402|gb|EGE00412.1| Pre-mRNA-processing ATP-dependent RNA helicase prp5 [Trichophyton
tonsurans CBS 112818]
Length = 1182
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/435 (39%), Positives = 249/435 (57%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +TE + R + + I +G +P P++ W++ L + L + ++GY+ P+ IQ
Sbjct: 518 LAGLTEAEVTNIRLELDGIKVRGVDVPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQ 577
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P + RDVIG+A+TGSGKT AF+LPM +I P+ EN EGP +++M PTRELA
Sbjct: 578 AVPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIRDQRPL--EN-MEGPISLIMTPTRELA 634
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 635 TQIHRECRPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVT 694
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L N++P R T +FSA
Sbjct: 695 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----GNIRPN------------RQTVLFSA 737
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L P+ + +G I+Q V + + KF RL LL DE
Sbjct: 738 TFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDE 797
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D +VFV+ ++ AD + ++L + GY ++HGGK Q R+ +++ F+ + +L+AT
Sbjct: 798 NEDARTLVFVDRQEAADRLLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILIAT 857
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 858 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISK 917
Query: 632 MLIQSNSPVPPELAK 646
L QS PVP + K
Sbjct: 918 ALKQSGQPVPEPIQK 932
>gi|366989727|ref|XP_003674631.1| hypothetical protein NCAS_0B01730 [Naumovozyma castellii CBS 4309]
gi|342300495|emb|CCC68257.1| hypothetical protein NCAS_0B01730 [Naumovozyma castellii CBS 4309]
Length = 618
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 248/418 (59%), Gaps = 21/418 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P + + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 129 DDIPVEASGDNVPEAITAFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAAGRDLMAC 188
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEEN-EAEG-------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P +N ++ G P AV+MAPTRELA QI +E
Sbjct: 189 AQTGSGKTGGFLFPVLSESFKTGPTVVDNAQSHGYYQKKAYPTAVIMAPTRELATQIFDE 248
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + ++ + GG I Q + +GC++++ATPGRL D ++R L+ Y+V
Sbjct: 249 AKKFCYRSWVQPCVVYGGSPIGNQMREMDRGCDLLVATPGRLSDLIDRGKISLSNVKYLV 308
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ +++ P E R T MFSAT P ++ L
Sbjct: 309 LDEADRMLDMGFEPQIRAIVEG---ADMTPVGE----------RQTLMFSATFPADIQHL 355
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 356 ARDFLADYIFLSVGRVGSTSENITQRVLYVENQDKKSALLDLLSASNDGLTLIFVETKRM 415
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q++RE +L FR+ R N+LVAT VA RG+DIP+V HV
Sbjct: 416 ADQLTDFLIMQDFRATAIHGDRTQQERERALAAFRSGRANLLVATAVAARGLDIPNVTHV 475
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
INYD+PG+I+ Y HRIGRTGRAG TGVAT F ++++ L ++L ++N VP L
Sbjct: 476 INYDLPGDIDDYVHRIGRTGRAGNTGVATAFFNRDNSNIVKGLYEILSEANQDVPAFL 533
>gi|403263533|ref|XP_003924081.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 3 [Saimiri
boliviensis boliviensis]
Length = 645
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 147 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 206
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 207 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 266
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 267 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 326
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 327 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 371
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 372 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLTLVFV 431
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 432 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 491
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 492 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 551
Query: 642 PEL 644
L
Sbjct: 552 SWL 554
>gi|198435916|ref|XP_002130991.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
[Ciona intestinalis]
Length = 1150
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 240/411 (58%), Gaps = 24/411 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
NI +G P+P+++W + ++ ++L A+++ Y+ P+ IQ AIP + D+IGIA+T
Sbjct: 477 NIKIRGKSCPKPIQSWVQAGVSYKMLNALKKANYEKPTVIQAQAIPAIMSGHDLIGIAKT 536
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPML I P+ + EGP AV+M PTRELA QI +E KF L +
Sbjct: 537 GSGKTVAFLLPMLRQIMDQRPLED---TEGPIAVIMTPTRELALQITKECKKFTKSLKLH 593
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
VV + GG I EQ +++G E+++ TPGR+ID L R L +C Y+VLDEADRM
Sbjct: 594 VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTVNNGRVTNLRRCTYLVLDEADRMF 653
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ V+++ +P+ R T +FSAT P +E LAR+ L P
Sbjct: 654 DMGFEPQVMHVINS-----CRPD------------RQTVLFSATFPRQMEALARRILNKP 696
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKN 533
V V +G + Q V+++ E +KF +L LL + +K A+ VFV+ ++ AD + K
Sbjct: 697 VEVQVGGRSVVCSDVKQQVLILTEEQKFLKLLELLGQYQEKGAVLVFVDKQERADYLLKE 756
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L Y LHGG Q R+ + F+ +L+AT VA RG+D+ ++ V+N++ P
Sbjct: 757 LMDKSYSCMALHGGIDQYDRDSIISDFKRGVNQLLIATSVAARGLDVKNLILVVNFNCPN 816
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ E Y HR GRTGRAG G A TF+T ++ + L S + VPP+L
Sbjct: 817 HYEDYVHRCGRTGRAGNKGFAYTFITQDQARYAGEIIKALELSLTKVPPDL 867
>gi|170589285|ref|XP_001899404.1| KIAA0801 protein [Brugia malayi]
gi|158593617|gb|EDP32212.1| KIAA0801 protein, putative [Brugia malayi]
Length = 964
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 204 DLYDTF----DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLT 259
DLY F R + + +L ++T+++ +RE+ +I +G P+P+R+WA+ +
Sbjct: 253 DLYCIFVYYRPFRKNFYVETAELAKITKKEVDEYREELDIRVRGKNCPKPIRSWAQCGVE 312
Query: 260 PELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPI 319
++L ++++ YK P+PIQ AIP + RDVIGIA+TGSGKT AF+LPM +I P
Sbjct: 313 WKILSTLKKLEYKKPTPIQCQAIPAIISGRDVIGIAKTGSGKTLAFLLPMFRHILDQP-- 370
Query: 320 SEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
E E +GP AV+M+PTRELA Q +E KFA L ++V + GG I +Q +++G E
Sbjct: 371 -ELEEMDGPIAVIMSPTRELAMQTWKEANKFAKQLNVRVACVYGGVGISDQIGDLKRGAE 429
Query: 380 VVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP 436
VV+ T GRL D L + + L + Y+VLDEADRM DMGFEPQV+ +++ N++P
Sbjct: 430 VVVCTVGRLTDMLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRP 484
Query: 437 ENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM 496
+ R T +FSAT P +E LARK L P+ + +G + ++Q+VV++
Sbjct: 485 D------------RQTVLFSATFPRQMEALARKILDKPIEIMVGGKSVVCDDVNQNVVIL 532
Query: 497 KESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
+E +K +L LL + +VFV+ ++ AD + L + GY LHGG Q R+
Sbjct: 533 EEHQKMLKLLELLGVYWENGNVLVFVDKQEKADDLVAQLMRSGYNCAPLHGGIDQFDRDS 592
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
++ ++ + +LVAT VA RG+DI + V+NYD P + E Y HR+GRTGRAG G A
Sbjct: 593 TILDYKAGKIKLLVATSVAARGLDIKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAY 652
Query: 616 TFL 618
TF+
Sbjct: 653 TFI 655
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/414 (40%), Positives = 244/414 (58%), Gaps = 22/414 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
R+ N+ G+ P+P ++A +L+ + + Y P+PIQ +P+ L RD+I
Sbjct: 228 LRQKLNLRVSGAAPPKPSTSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDMI 287
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTAAF+ PML +I E EGP AV++ PTREL QQI E +F
Sbjct: 288 GIAKTGSGKTAAFIWPMLVHIMDQ---KELEAGEGPIAVIVCPTRELCQQIHAECKRFGK 344
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ V++ GG S+ EQ +++G E+V+ TPGRLID ++++ L + Y+V DEADR
Sbjct: 345 AYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTYLVFDEADR 404
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M DMGFE QV + +S+++P+ R T +FSAT +ERLAR L
Sbjct: 405 MFDMGFEYQVRSI-----ASHVRPD------------RQTLLFSATFRKKIERLARDILV 447
Query: 473 NPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLDEL-GDKTAIVFVNTKKNADMV 530
+P+ V G G+A E ++Q V +++ S+K+S L R L E + ++FV K N++ +
Sbjct: 448 DPIRVVQGDIGEANEDVTQVVEMLLSGSDKWSWLTRRLVEFTSSGSVLIFVTKKTNSEEL 507
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
A NL + GY + LHG Q +R + F+ VLVATDVA RG+DIP + VINYD
Sbjct: 508 AANLTQEGYSLGLLHGDMDQSERNKVISDFKKNNMPVLVATDVAARGLDIPSIRTVINYD 567
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ +I+ +THRIGRTGRAG+ GVA T LT D+ DL + L +N V EL
Sbjct: 568 VARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDSTFAGDLVRNLEGANQAVSKEL 621
>gi|334329478|ref|XP_001378186.2| PREDICTED: ATP-dependent RNA helicase DDX3X [Monodelphis domestica]
Length = 654
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 154 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 213
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 214 AQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 273
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 274 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 333
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 334 LVLDEADRMLDMGFEPQIRRIVEQDTMPQKGV---------------RHTMMFSATFPKE 378
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 379 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLTLVFV 438
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 439 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 498
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 499 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDRNINITKDLLDLLVEAKQEVP 558
Query: 642 PEL 644
L
Sbjct: 559 SWL 561
>gi|427797625|gb|JAA64264.1| Putative abstrakt, partial [Rhipicephalus pulchellus]
Length = 656
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 265/495 (53%), Gaps = 41/495 (8%)
Query: 165 QKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHW-SEKKLE 223
+KK A+ E + ++++++E + E E AL E A +D + W L
Sbjct: 129 KKKAEARKESALEKQLKEEEKILESVAERRALMGVAELAKGIQ-YDQPIQTGWRPPAYLV 187
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
T R+ + I +G IP P+ + E K +L ++ G P+PIQM +P
Sbjct: 188 NTTLEQQEKVRQKYRILVEGEGIPAPITTFKEMKFPRTILSSLRHKGITKPTPIQMQGLP 247
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTREL 339
L RD+IGIA TGSGKT FVLP+L + RLP I + EGPY +++ P+REL
Sbjct: 248 AVLSGRDMIGIAFTGSGKTLVFVLPLLMFCLEQEKRLPFI----QNEGPYGLIVCPSREL 303
Query: 340 AQQIEEETVKF------AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
A+Q E F A Y ++ +GG S+ EQ +R+G V++ATPGRL+D L+
Sbjct: 304 AKQTYEIVSFFVRDLEGAGYPSLRGCLCIGGTSVREQLEVVRRGVHVMVATPGRLMDMLD 363
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
++ L+ C Y+ LDEADRMIDMGFE V + R T
Sbjct: 364 KKMVNLDMCRYLCLDEADRMIDMGFEEDVRTIFSFFKGQ-----------------RQTL 406
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG 513
+FSATMP ++ AR L P+ V +G AG A+ + Q V +K+ K L L
Sbjct: 407 LFSATMPKKIQNFARSALVKPITVNVGRAGAASLDVVQEVEYVKQEAKIVHLLETLQ--- 463
Query: 514 DKTA---IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVA 570
KTA ++F K++ D + + L G +HGGK QE+R +++ FR +VLVA
Sbjct: 464 -KTAPPVLIFAEKKQDVDAIHEYLLLKGVEAVAIHGGKDQEERSRAVDAFRRGEKDVLVA 522
Query: 571 TDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDL 629
TDVA +G+D ++ HVINYDMP +IE Y HRIGRTGR+G+ G+ATTF+ D V D+
Sbjct: 523 TDVASKGLDFENIQHVINYDMPEDIENYVHRIGRTGRSGRVGIATTFINKSCDESVLLDM 582
Query: 630 KQMLIQSNSPVPPEL 644
K +L+++ VPP L
Sbjct: 583 KHLLLEAKQKVPPFL 597
>gi|297738935|emb|CBI28180.3| unnamed protein product [Vitis vinifera]
Length = 916
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + GS IP P+ +AE L L + + R Y P+PIQ AIP+ + RD++
Sbjct: 405 EDIPVEASGSDIPPPVSAFAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMAC 464
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
A+TGSGKTAAF P++ I R P A++++PTREL+ QI EE KF++
Sbjct: 465 AQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKT 524
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
G+KVV GG I +Q + +G ++++ATPGRL+D +ER L Y+ LDEADRM+
Sbjct: 525 GLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRML 584
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA +L N
Sbjct: 585 DMGFEPQIRKIVEQM---DMPPPGA----------RQTMLFSATFPNEIQRLAADFLSNY 631
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-DELGDKT------AIVFVNTKKNA 527
+ +++G G +T+LI Q V +++++K L LL ++ ++T +VFV TK+
Sbjct: 632 IFLSVGRVGSSTDLIVQRVEFVEDTDKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGV 691
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + + L G T +HG K Q +RE +L+ F++ ++VATDVA RG+DIP VAHVI
Sbjct: 692 DALEQWLCMNGLAATAIHGDKVQMERERALKSFKSGATPIMVATDVAARGLDIPHVAHVI 751
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
N+D+P I+ Y HRIGRTGRAGK+G+AT F + + L +++ +SN VP L ++
Sbjct: 752 NFDLPKAIDDYVHRIGRTGRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQY 811
>gi|221482438|gb|EEE20786.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
Length = 1544
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 240/412 (58%), Gaps = 24/412 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
NI +G + PRP+ + + L ++++ + G P PIQM AIP + RDVI +AET
Sbjct: 960 NIKVRGKQCPRPITTFFQCGLPDKIVKYLTLRGITEPFPIQMQAIPCLMCGRDVIAVAET 1019
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT A+ LP++ ++ + +++ +G A+V+APTREL QI +E + + +
Sbjct: 1020 GSGKTLAYGLPLIRHVLS---VKQQDFRDGAIALVIAPTRELCNQIFKEINRCCKLVDLN 1076
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
V+ GG I Q I++G EV++ TPGRLID L R L + ++VLDEADRM
Sbjct: 1077 AVACYGGAGIGSQLGAIKRGVEVIVGTPGRLIDILTMNGGRLTSLKRVTFIVLDEADRMF 1136
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
D GFEPQV ++ ++ +P+ R T +FSAT PP +E LAR+ L+ P
Sbjct: 1137 DFGFEPQVTSII-----ASSRPD------------RQTCLFSATFPPHIEALARRILQKP 1179
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKN 533
V + +G G+ + Q+V +M+E KF RL +LL E + + I+FVN + AD +
Sbjct: 1180 VEIIVGEKGRTAANVQQYVEVMEEERKFFRLLQLLGEWQEHGSVIIFVNRQVEADELFTE 1239
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L K GY+ TLHGG+ Q RE +++ F+ +L+AT VA RG+D VIN P
Sbjct: 1240 LLKYGYQAATLHGGQDQTDREFTIQEFQDGVRTLLIATSVAARGLDCKHCVLVINMTCPN 1299
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
+IE Y HRIGRTGRAG+ GVA TFLT D D DL++ L QS VP L+
Sbjct: 1300 HIEDYVHRIGRTGRAGRIGVAYTFLTKEDADKADDLEKALTQSGQAVPQALS 1351
>gi|395854982|ref|XP_003799954.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Otolemur
garnettii]
Length = 661
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNVNITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|6118555|gb|AAF04150.1|AF195417_1 DEAD-box protein abstrakt [Homo sapiens]
Length = 621
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 116 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 173
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 174 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 233
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 234 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 289
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 290 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 349
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 350 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 392
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 393 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 451
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 452 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 511
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 512 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 562
>gi|348689892|gb|EGZ29706.1| hypothetical protein PHYSODRAFT_323195 [Phytophthora sojae]
Length = 631
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/416 (37%), Positives = 248/416 (59%), Gaps = 21/416 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ ++ +L PE++R +E Y P+P+Q +IP+GL RD++
Sbjct: 137 DDIPVETSGENVPDPVSEFSATELGPEVIRNLELCKYSKPTPVQKYSIPIGLAGRDMMAC 196
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG------PYAVVMAPTRELAQQIEEETV 348
A+TGSGKT F+ P L + R+ G P A+V++PTRELA QI +E
Sbjct: 197 AQTGSGKTGGFLFPTLAAMLRVGGTPPPEVGHGRSRKIFPSALVLSPTRELASQIHDEAK 256
Query: 349 KFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLD 408
KF + GI V I GG + Q + +GC++++ATPGRL+D +ER L +++LD
Sbjct: 257 KFCYCTGIAPVVIYGGAEVGRQLRELERGCDLLVATPGRLVDLMERGRISLACIRFLILD 316
Query: 409 EADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLAR 468
EADRM+DMGFEPQ+ ++ E E++ +R T+MFSAT P ++RLA
Sbjct: 317 EADRMLDMGFEPQIRRIV------------EQEDMPRER---QTFMFSATFPREIQRLAS 361
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNAD 528
+LR+ + +T+G G A++ + Q V +++ +K L R L+++ D +VFV TK+ AD
Sbjct: 362 DFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGLILVFVETKRGAD 421
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ L + G+ T++HG +SQ +RE +L F++ R VLVATDVA RG+DI V VIN
Sbjct: 422 FLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAARGLDIDGVTQVIN 481
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+D+P NI+ Y HRIGRTGR G G A + + + ++ ++ +++ ++ +P L
Sbjct: 482 FDLPNNIDDYVHRIGRTGRVGNVGNALSMMNEKNRNIAREMYELMAENGQEIPAFL 537
>gi|350536495|ref|NP_001233197.1| probable ATP-dependent RNA helicase DDX46 [Sus scrofa]
gi|336092215|gb|AEI00731.1| DEAD box polypeptide 46 [Sus scrofa]
Length = 1032
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/430 (40%), Positives = 257/430 (59%), Gaps = 25/430 (5%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + +FR + IS KG P+P+++ + ++ ++L ++++ GY+ P+PIQ
Sbjct: 342 LAKMSQEEVNVFRLEMEGISVKGKGCPKPIKSGVQCGISMKILNSLKKHGYEKPTPIQTQ 401
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD++GIA+TGSGKT AF+LPM +I + E EGP AV+M PTRELA
Sbjct: 402 AIPAIMSGRDLMGIAKTGSGKTMAFLLPMFRHIMDQRSL---EEGEGPIAVIMTPTRELA 458
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI +E KF+ LG++VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 459 LQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVT 518
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++D N++P+ R T MFSA
Sbjct: 519 NLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPD------------RQTVMFSA 561
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-T 516
T P A+E LAR+ L P+ V +G + Q V++++E +KF +L LL + +
Sbjct: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
I+FV+ +++AD + K+L + Y +LHGG Q R+ + F+ +LVAT VA R
Sbjct: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+D+ + V+NY P + E Y HR GRTGRAG G A TF+T D+ + L S
Sbjct: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELS 741
Query: 637 NSPVPPELAK 646
+ VPP+L K
Sbjct: 742 GTAVPPDLEK 751
>gi|395518704|ref|XP_003763499.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Sarcophilus
harrisii]
Length = 664
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPQKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGEDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDRNANITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|383852804|ref|XP_003701915.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Megachile
rotundata]
Length = 609
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 255/436 (58%), Gaps = 25/436 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FRE+ I+ KG IP P++++ EG P +L + + GY P+ IQ P+ L +D++
Sbjct: 95 FRENAEITVKGDNIPNPIQHFEEGNFPPYVLEVIHKQGYSQPTAIQAQGWPIALSGKDLV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
IA+TGSGKT ++LP + +I P +S +GP A+++APTRELAQQI+E F
Sbjct: 155 AIAQTGSGKTLGYILPAIVHIIHQPRLSP---GDGPVALILAPTRELAQQIQEVANCFGE 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G++ I GG Q + +G E+ IATPGRLID LER L +C Y+VLDEADR
Sbjct: 212 SSGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ ++P+ R M+SAT P V LA +L
Sbjct: 272 MLDMGFEPQIRKIIE-----QIRPD------------RQVLMWSATWPKEVRALAEDFLT 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGD---KTAIVFVNTKKNAD 528
+ + + IG+ A I Q V + +E EK +L RLL E+G+ I+FV TK+ D
Sbjct: 315 DYMHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIGNEKENKTIIFVETKRKVD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ +N+ + G++ ++HG K+Q++R+ L+ F++ R +LVATDVA RG+D+ DV +VIN
Sbjct: 375 DITRNIRRDGWQALSIHGDKNQQERDHVLQEFKSGRAPILVATDVAARGLDVDDVKYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D P + E Y HRIGRTGR +TG A F T H+ DL ++L ++ + P L +
Sbjct: 435 FDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGDLIEVLREAGQNINPRLTEM- 493
Query: 649 ASKFKPGTIPDRPPRR 664
A K G +R +R
Sbjct: 494 AELAKSGNPGNRSGKR 509
>gi|221504486|gb|EEE30159.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 1544
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 240/412 (58%), Gaps = 24/412 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
NI +G + PRP+ + + L ++++ + G P PIQM AIP + RDVI +AET
Sbjct: 960 NIKVRGKQCPRPITTFFQCGLPDKIVKYLTLRGITEPFPIQMQAIPCLMCGRDVIAVAET 1019
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT A+ LP++ ++ + +++ +G A+V+APTREL QI +E + + +
Sbjct: 1020 GSGKTLAYGLPLIRHVLS---VKQQDFRDGAIALVIAPTRELCNQIFKEINRCCKLVDLN 1076
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
V+ GG I Q I++G EV++ TPGRLID L R L + ++VLDEADRM
Sbjct: 1077 AVACYGGAGIGSQLGAIKRGVEVIVGTPGRLIDILTMNGGRLTSLKRVTFIVLDEADRMF 1136
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
D GFEPQV ++ ++ +P+ R T +FSAT PP +E LAR+ L+ P
Sbjct: 1137 DFGFEPQVTSII-----ASSRPD------------RQTCLFSATFPPHIEALARRILQKP 1179
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKN 533
V + +G G+ + Q+V +M+E KF RL +LL E + + I+FVN + AD +
Sbjct: 1180 VEIIVGEKGRTAANVQQYVEVMEEERKFFRLLQLLGEWQEHGSVIIFVNRQVEADELFTE 1239
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L K GY+ TLHGG+ Q RE +++ F+ +L+AT VA RG+D VIN P
Sbjct: 1240 LLKYGYQAATLHGGQDQTDREFTIQEFQDGVRTLLIATSVAARGLDCKHCVLVINMTCPN 1299
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
+IE Y HRIGRTGRAG+ GVA TFLT D D DL++ L QS VP L+
Sbjct: 1300 HIEDYVHRIGRTGRAGRIGVAYTFLTKEDADKADDLEKALTQSGQAVPQALS 1351
>gi|296807861|ref|XP_002844269.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
gi|238843752|gb|EEQ33414.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
Length = 1183
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 241/417 (57%), Gaps = 29/417 (6%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I +G +P P++ W++ L + L + ++GY+ P+ IQ A+P + RDVIG+A+TG
Sbjct: 538 IKVRGVDVPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTG 597
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT AF+LPM +I P+ EN EGP +++M PTRELA QI E F L ++
Sbjct: 598 SGKTIAFLLPMFRHIRDQRPL--EN-MEGPISLIMTPTRELATQIHRECRPFLKALNLRA 654
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMID 415
V GG I++Q +++G E+++ TPGR+ID L R L + YVVLDEADRM D
Sbjct: 655 VCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFD 714
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
MGFEPQV+ +L N++P R T +FSAT P +E LARK L PV
Sbjct: 715 MGFEPQVMKIL-----GNIRPN------------RQTVLFSATFPRNMEALARKTLSKPV 757
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFVNTKKNADM 529
+ +G I+Q V + + KF RL LL DE D +VFV+ ++ AD
Sbjct: 758 EIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDENEDARTLVFVDRQEAADR 817
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+ ++L + GY ++HGGK Q R+ +++ F+ + +L+AT VA RG+D+ + V+NY
Sbjct: 818 LLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILIATSVAARGLDVKQLKLVVNY 877
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
D P ++E Y HR GRTGRAG TG A TFLT D+ + L QS PVP + K
Sbjct: 878 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQK 934
>gi|297303643|ref|XP_001095294.2| PREDICTED: ATP-dependent RNA helicase DDX3X [Macaca mulatta]
Length = 738
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 261 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 320
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 321 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 380
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 381 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 440
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 441 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 485
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 486 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 545
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 546 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 605
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 606 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 665
Query: 642 PEL 644
L
Sbjct: 666 SWL 668
>gi|313246316|emb|CBY35237.1| unnamed protein product [Oikopleura dioica]
Length = 653
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 256/442 (57%), Gaps = 30/442 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P + ++ +L P + V+ Y P+P+Q A+P+ RD++
Sbjct: 181 DDIPVETSGENVPACIDDFVSAELGPIITENVKLAHYTVPTPVQKYAVPIIHAGRDIMSC 240
Query: 295 AETGSGKTAAFVLPMLTYISRLP---PISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF++PML+ I P P + +A P A+V++PTREL QI +E +KFA
Sbjct: 241 AQTGSGKTAAFLMPMLSNIFHNPGKIPRHQSRKAY-PLALVLSPTRELTNQIYQEALKFA 299
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ ++ I GG + EQ + +GC +++ATPGRL D LER L C ++ LDEAD
Sbjct: 300 YRSKVRPCVIYGGADVGEQLRDLSRGCHLLVATPGRLADFLERGKVGLEFCRFLCLDEAD 359
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY---RTTYMFSATMPPAVERLAR 468
RM+DMGFEPQ+ ++ EK I+ R T MFSAT P ++ LA
Sbjct: 360 RMLDMGFEPQIRRII------------------EKVIFPSDRQTLMFSATFPKQIQALAS 401
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNAD 528
+L N + + +G G + I+Q ++E+EK +L LL+ + IVF TKK AD
Sbjct: 402 DFLENYIFLAVGRVGSTSANITQRFEYVQETEKVRKLCELLENGQEMLTIVFTETKKGAD 461
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ L + GY+ T +HG ++Q++RE ++ F++ + +LVAT VA RG+DIP+V HVIN
Sbjct: 462 YLDHFLHERGYQSTCIHGDRNQQEREEAVHLFKSGQTPILVATAVAARGLDIPNVRHVIN 521
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D+P I+ Y HRIGRTGRAG TG AT F + + DL Q+L ++ VP +L K
Sbjct: 522 FDLPSEIDEYVHRIGRTGRAGNTGWATAFYNEKNAKISDDLLQLLTEAKQEVPSKL-KDI 580
Query: 649 ASKFKPGTIPDRPPRRNDTVFA 670
A ++ +RP R N V+A
Sbjct: 581 ARSYR----DNRPVRPNGGVYA 598
>gi|21071032|ref|NP_057306.2| probable ATP-dependent RNA helicase DDX41 [Homo sapiens]
gi|55625482|ref|XP_518135.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 3 [Pan
troglodytes]
gi|397470614|ref|XP_003806913.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Pan paniscus]
gi|426351200|ref|XP_004043145.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Gorilla
gorilla gorilla]
gi|20532370|sp|Q9UJV9.2|DDX41_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX41; AltName:
Full=DEAD box protein 41; AltName: Full=DEAD box protein
abstrakt homolog
gi|15930065|gb|AAH15476.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Homo sapiens]
gi|119605387|gb|EAW84981.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_d [Homo
sapiens]
gi|189067937|dbj|BAG37875.1| unnamed protein product [Homo sapiens]
gi|306921323|dbj|BAJ17741.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [synthetic construct]
gi|325463517|gb|ADZ15529.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [synthetic construct]
gi|410219864|gb|JAA07151.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
gi|410264084|gb|JAA20008.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
gi|410289890|gb|JAA23545.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|281347447|gb|EFB23031.1| hypothetical protein PANDA_001323 [Ailuropoda melanoleuca]
Length = 613
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 115 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 174
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 175 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 234
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 235 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 294
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 295 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 339
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 340 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 399
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT V+ RG+DI
Sbjct: 400 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVSARGLDIS 459
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 460 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 519
Query: 642 PEL 644
L
Sbjct: 520 SWL 522
>gi|317030312|ref|XP_001392304.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
niger CBS 513.88]
gi|143359932|sp|A2QQA8.2|PRP5_ASPNC RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1180
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 256/446 (57%), Gaps = 32/446 (7%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+TF R + L +M++ + R + + I +G +P+P++ W++ L + L
Sbjct: 503 YETF--RKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLD 560
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
++++GY+ + IQ AIP + RDVIG+A+TGSGKT AF++PM +I P+ +
Sbjct: 561 VIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL---DN 617
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP ++M PTRELA QI ++ F L ++ V GG I++Q +++G E+++ T
Sbjct: 618 MEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCT 677
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ ++ +N++P+
Sbjct: 678 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD---- 728
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P +E LARK L P+ + +G I+Q V + + +K
Sbjct: 729 --------RQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQK 780
Query: 502 FSRLQRLL------DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
F RL LL DE D A++FV+ ++ AD + + L + GY ++HGGK Q R+
Sbjct: 781 FVRLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDS 840
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
++E F+ + VL+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 841 TIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAV 900
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP 641
TFLT D+ + L QS VP
Sbjct: 901 TFLTEDQERYSVDIAKALKQSGQKVP 926
>gi|30584005|gb|AAP36251.1| Homo sapiens DEAD-box protein abstrakt [synthetic construct]
gi|61369941|gb|AAX43416.1| DEAD box polypeptide 41 [synthetic construct]
gi|61369946|gb|AAX43417.1| DEAD box polypeptide 41 [synthetic construct]
Length = 623
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|301785524|ref|XP_002928176.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like
[Ailuropoda melanoleuca]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|356562686|ref|XP_003549600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine
max]
Length = 602
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 255/422 (60%), Gaps = 22/422 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
M+E++ +R I+ +G+ +P+P+ + E L + + + +P+PIQ P+
Sbjct: 152 MSEQEVLHYRASREITVQGNDVPKPIMMFHEANFPDYCLEVIANLRFADPTPIQAQGWPM 211
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP L +++ P ++ +GP +V+APTRELA QI+
Sbjct: 212 ALKGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLAH---GDGPIVLVLAPTRELAVQIQ 268
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE +KF + I GG Q +++G E+VIATPGRLID LE ++ L + Y
Sbjct: 269 EEALKFGSRANKRSTCIYGGAPKGPQIRELKRGVEIVIATPGRLIDMLEAQHTNLRRVTY 328
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ + ++P+ R T ++SAT P VE
Sbjct: 329 LVLDEADRMLDMGFEPQIRKIV-----AQIRPD------------RQTLLWSATWPRDVE 371
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
LAR++L NP V IG+ KA + I+Q V ++ + EK++RL RLL E+ D + I +F+
Sbjct: 372 TLARQFLHNPYKVIIGSPYLKANQSINQIVEVVTDMEKYNRLIRLLKEVMDGSRILIFME 431
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D V + + G+ ++HG K+Q +R+ L F++ R ++ ATDVA RG+D+ D
Sbjct: 432 TKKGCDQVTRQMRVDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAARGLDVKD 491
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
+ VINYD P ++E Y HRIGRTGRAG G A TF T + DL ++L + V P
Sbjct: 492 IKCVINYDFPTSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKFARDLIKILQDAGQTVSP 551
Query: 643 EL 644
L
Sbjct: 552 AL 553
>gi|259149685|emb|CAY86489.1| Ded1p [Saccharomyces cerevisiae EC1118]
Length = 604
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 249/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD++
Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 185
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 186 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 244
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 245 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 305 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 351
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 352 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 411
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 412 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 471
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 472 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 529
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 530 KDAMMSAPGS 539
>gi|417515860|gb|JAA53735.1| putative ATP-dependent RNA helicase DDX41 [Sus scrofa]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|417411966|gb|JAA52400.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 620
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 115 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 172
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 173 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 232
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 233 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 288
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 289 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 348
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 349 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 391
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 392 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 450
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 451 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 510
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 511 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 561
>gi|73953218|ref|XP_536417.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 1
[Canis lupus familiaris]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|296193469|ref|XP_002744529.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Callithrix
jacchus]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|395861175|ref|XP_003802869.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Otolemur
garnettii]
Length = 622
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|355683291|gb|AER97077.1| DEAD box polypeptide 41 [Mustela putorius furo]
Length = 621
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|440898373|gb|ELR49887.1| Putative ATP-dependent RNA helicase DDX41, partial [Bos grunniens
mutus]
Length = 614
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 109 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 166
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 167 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 226
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 227 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 282
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 283 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 342
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 343 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 385
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 386 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 444
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 445 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 504
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 505 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 555
>gi|402873575|ref|XP_003900647.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Papio anubis]
gi|355691902|gb|EHH27087.1| hypothetical protein EGK_17201 [Macaca mulatta]
gi|387542592|gb|AFJ71923.1| putative ATP-dependent RNA helicase DDX41 [Macaca mulatta]
Length = 622
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEARQKVPPVL 563
>gi|432104108|gb|ELK30938.1| Putative ATP-dependent RNA helicase DDX41 [Myotis davidii]
Length = 657
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 152 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYILSMSEERHERVRKKYHILVEGD 209
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 210 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 269
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 270 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 325
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 326 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 385
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 386 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 428
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 429 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 487
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 488 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 547
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 548 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 598
>gi|47217137|emb|CAG02638.1| unnamed protein product [Tetraodon nigroviridis]
Length = 602
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 259/446 (58%), Gaps = 34/446 (7%)
Query: 217 WSEK-KLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
WS LE T ++ + +D + G+ P + ++ + + ++ + Y P+
Sbjct: 93 WSMNFSLEATTGINFEKY-DDIPVEATGTNCPSHIESFQDVDMGEIIMGNITLSRYTRPT 151
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI------SRLPPISEENEAEG-- 327
P+Q AIP+ +RD++ A+TGSGKTAAF+LP+L+ I L I + G
Sbjct: 152 PVQKYAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGDALQAIKSSGQENGRY 211
Query: 328 ------PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
P ++V+APTRELA QI +E KFA+ ++ + GG I +Q + +GC ++
Sbjct: 212 GRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLL 271
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENE 439
+ATPGRL+D +ER L+ CNY+VLDEADRM+DMGFEPQ+ ++ D MP +
Sbjct: 272 VATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGI----- 326
Query: 440 DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKES 499
R T MFSAT P ++ LAR +L + + + +G G +E I+Q VV ++E
Sbjct: 327 ----------RQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEEL 376
Query: 500 EKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLE 558
+K S L LL+ G D +VFV TKK AD + L + GY T++HG +SQ RE +L
Sbjct: 377 DKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALH 436
Query: 559 GFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
FR+ R +LVAT VA RG+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F
Sbjct: 437 QFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFF 496
Query: 619 TFHDTDVFYDLKQMLIQSNSPVPPEL 644
++++ DL +L+++ +P L
Sbjct: 497 NDKNSNITKDLLDLLVEAKQGIPTWL 522
>gi|323453556|gb|EGB09427.1| hypothetical protein AURANDRAFT_53132 [Aureococcus anophagefferens]
Length = 790
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/466 (38%), Positives = 261/466 (56%), Gaps = 50/466 (10%)
Query: 211 MRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV- 269
+R + + + L ++ D + R+ I +G P P+ W + L + A+ +
Sbjct: 39 IRKNFYVVPRALGALSAADVALRRDADEIKVRGKGCPPPIETWGQCGLPDKAHGALVKAF 98
Query: 270 -GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+ P PIQ A+P + RDVIGIA+TGSGKT AFVLP+L +I PPI + + GP
Sbjct: 99 GDHTEPFPIQKQALPALMSGRDVIGIAKTGSGKTLAFVLPLLRHIMDQPPIVDGGD--GP 156
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
A+++AP RELA QI E +FA+ LG++ +++ GG + +Q +++G E+V+ATPGRL
Sbjct: 157 VALILAPARELALQIWREAKRFANPLGLRAIAVYGGAKVADQIADLKRGAEIVVATPGRL 216
Query: 389 IDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE 445
ID L + R L + +YVVLDEADRM DMGFEPQ+ +L N +P+
Sbjct: 217 IDILTMSQGRLIGLRRVSYVVLDEADRMFDMGFEPQIAMIL-----RNARPD-------- 263
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
R T +FSAT P AVE+LARK L P+ + G A + + Q+V + E KF RL
Sbjct: 264 ----RQTALFSATFPRAVEQLARKALSYPLEIVAGGRSVAADTVDQYVELRAEGTKFMRL 319
Query: 506 QRLLDELGDK-TAIVFVNTKKNADMVAKNLDKLGYRVT---------------------- 542
+LL ++ + ++FV+T+ D + + L K GYR
Sbjct: 320 LQLLGHWFERGSVLIFVDTQLKCDSIYEQLMKAGYRAAKESEIPNFKGSDLGHFPLAGYP 379
Query: 543 --TLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+LHGGK Q R+ ++ F++ VLVAT VAGRG+D+P + V+NY P ++E Y H
Sbjct: 380 ALSLHGGKDQADRDGTISDFKSGVATVLVATSVAGRGLDVPSIVCVVNYSAPNHLEDYVH 439
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYD-LKQMLIQSNSPVPPELA 645
R+GRTGRAG+ G A TFL + D + L + L Q+ +PPELA
Sbjct: 440 RVGRTGRAGRAGTAYTFLDPVNEDAYAPILHKALKQAKMAIPPELA 485
>gi|237841393|ref|XP_002369994.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967658|gb|EEB02854.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 1544
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/412 (40%), Positives = 240/412 (58%), Gaps = 24/412 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
NI +G + PRP+ + + L ++++ + G P PIQM AIP + RDVI +AET
Sbjct: 960 NIKVRGKQCPRPITTFFQCGLPDKIVKYLTLRGITEPFPIQMQAIPCLMCGRDVIAVAET 1019
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT A+ LP++ ++ + +++ +G A+V+APTREL QI +E + + +
Sbjct: 1020 GSGKTLAYGLPLIRHVL---SVKQQDFRDGAIALVIAPTRELCNQIFKEINRCCKLVDLN 1076
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
V+ GG I Q I++G EV++ TPGRLID L R L + ++VLDEADRM
Sbjct: 1077 AVACYGGAGIGSQLGAIKRGVEVIVGTPGRLIDILTMNGGRLTSLKRVTFIVLDEADRMF 1136
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
D GFEPQV ++ ++ +P+ R T +FSAT PP +E LAR+ L+ P
Sbjct: 1137 DFGFEPQVTSII-----ASSRPD------------RQTCLFSATFPPHIEALARRILQKP 1179
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKN 533
V + +G G+ + Q+V +M+E KF RL +LL E + + I+FVN + AD +
Sbjct: 1180 VEIIVGEKGRTAANVQQYVEVMEEERKFFRLLQLLGEWQEHGSVIIFVNRQVEADELFTE 1239
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L K GY+ TLHGG+ Q RE +++ F+ +L+AT VA RG+D VIN P
Sbjct: 1240 LLKYGYQAATLHGGQDQTDREFTIQEFQDGVRTLLIATSVAARGLDCKHCVLVINMTCPN 1299
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
+IE Y HRIGRTGRAG+ GVA TFLT D D DL++ L QS VP L+
Sbjct: 1300 HIEDYVHRIGRTGRAGRIGVAYTFLTKEDADKADDLEKALTQSGQAVPQALS 1351
>gi|149726038|ref|XP_001502240.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Equus
caballus]
Length = 622
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|324502652|gb|ADY41165.1| ATP-dependent RNA helicase an3 [Ascaris suum]
Length = 656
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+ + GS +P P ++ + L P + + + GY P+P+Q +IP +Q+RDV+
Sbjct: 90 EEIPVEASGSDVPPPCASFDDLALHPWVQENIRKSGYSKPTPVQKYSIPTLMQRRDVMSC 149
Query: 295 AETGSGKTAAFVLPMLTYISRLPP--------ISEENEAEGPYAVVMAPTRELAQQIEEE 346
A+TGSGKTAAF++P++ I R P ++ A P A+++APTRELA Q +E
Sbjct: 150 AQTGSGKTAAFLIPLINQILRNGPDAIRPPQLMNNGRRAMFPVALILAPTRELAMQTHKE 209
Query: 347 TVKFAHYLGIKVVSIVGG-QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
+KF + I + GG ++ +Q ++R GC ++IATPGRL+D + + Y +L +C ++
Sbjct: 210 ALKFGYRTNITSAILYGGRENYRDQINKLRIGCHILIATPGRLLDVVRQGYVLLQECTFL 269
Query: 406 VLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
VLDEADRM+DMGFEPQ+ ++ + MP + R T MFSAT P +
Sbjct: 270 VLDEADRMLDMGFEPQIRQIVEQNGMPQKGM---------------RVTAMFSATFPKEI 314
Query: 464 ERLARKYLR-NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT-AIVFV 521
+ LA+ +L N V + +G G +E I Q V+ ++E EK + L LLD +K +VFV
Sbjct: 315 QVLAQDFLLPNYVFLAVGRVGSTSENIIQKVLWVEEHEKKNFLMELLDADANKGLTLVFV 374
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TK+ A+ +A L + Y V +HG Q +RE LE FRT NVLVAT VA RG+DIP
Sbjct: 375 ETKRGANDLAWFLQRNNYNVVPIHGDLKQFERERHLEMFRTGEANVLVATAVAARGLDIP 434
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +I+ Y HRIGRTGR G G AT+F + ++ DL ++L++SN +P
Sbjct: 435 NVKHVINFDLPSDIDEYVHRIGRTGRVGNVGQATSFFNDKNRNLGRDLAELLVESNQEMP 494
Query: 642 PEL 644
L
Sbjct: 495 EWL 497
>gi|395854986|ref|XP_003799956.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 3 [Otolemur
garnettii]
Length = 645
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNVNITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|302845088|ref|XP_002954083.1| hypothetical protein VOLCADRAFT_82651 [Volvox carteri f.
nagariensis]
gi|300260582|gb|EFJ44800.1| hypothetical protein VOLCADRAFT_82651 [Volvox carteri f.
nagariensis]
Length = 612
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/418 (39%), Positives = 249/418 (59%), Gaps = 17/418 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+ + G +P+P+ ++ E L ++ ++R + P+P+Q +I +GL RD++
Sbjct: 139 EEIPVETSGKDVPQPVHSFEELNLPQCMMDNIKRCKFTKPTPVQKHSITIGLAGRDLMAC 198
Query: 295 AETGSGKTAAFVLPMLTYI---SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF P++ + P + P A+V+APTREL QI +E KF
Sbjct: 199 AQTGSGKTAAFCFPIIASMLLKGYQPAAGRNSRKALPGALVLAPTRELTSQIYDEARKFT 258
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ G++ V I GG Q + +GC++++ATPGRL D +ER L+ ++ LDEAD
Sbjct: 259 YMTGLRPVVIYGGAPAPNQLRDLERGCDILVATPGRLSDFIERGRVGLSSILFLCLDEAD 318
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYL 471
RM+DMGFEPQ+ +++ ++ P + R T MFSAT P ++RLA +L
Sbjct: 319 RMLDMGFEPQIRRIVE---QEDMPPVGQ----------RQTLMFSATFPKEIQRLAADFL 365
Query: 472 RNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
N V +T+G G +T+LI QH+ + EK + L L+ + + +VFV TK+ AD +
Sbjct: 366 SNYVFLTVGRVGSSTDLIVQHIEYVSSDEKQNTLLDLISTV-EGLTLVFVETKRGADELE 424
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
+ L + T++HG +SQEQRE++L F++ + V+VATDVA RG+DIP V HVINYD+
Sbjct: 425 RILTRNQLPATSIHGDRSQEQREMALRSFKSGKTPVMVATDVAARGLDIPHVTHVINYDL 484
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
P +I+ Y HRIGRTGRAG G+AT F T D + L ++L ++N VP L + A
Sbjct: 485 PKDIDDYVHRIGRTGRAGHKGLATAFFTDADAPLARSLVEVLTETNQAVPGWLQNYAA 542
>gi|417412367|gb|JAA52573.1| Putative dead-box protein abstrakt, partial [Desmodus rotundus]
Length = 701
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/438 (39%), Positives = 260/438 (59%), Gaps = 29/438 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 174 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 233
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 234 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 293
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 294 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 353
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPEN---------------EDEELDEKR 447
+VLDEADRM+DMGFEPQ+ ++ D MP ++ + E + + K
Sbjct: 354 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRXXDRMLDMGFEPQIRRIVEQDTMPPKG 413
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR 507
+ R T MFSAT P ++ LAR +L + + +G G +E I+Q VV ++ES+K S L
Sbjct: 414 V-RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 472
Query: 508 LLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
LL+ G D +VFV TKK AD + L GY T++HG +SQ RE +L FR+ +
Sbjct: 473 LLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSP 532
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
+LVAT VA RG+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++
Sbjct: 533 ILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINIT 592
Query: 627 YDLKQMLIQSNSPVPPEL 644
DL +L+++ VP L
Sbjct: 593 KDLLDLLVEAKQEVPSWL 610
>gi|448097299|ref|XP_004198636.1| Piso0_002019 [Millerozyma farinosa CBS 7064]
gi|359380058|emb|CCE82299.1| Piso0_002019 [Millerozyma farinosa CBS 7064]
Length = 534
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/424 (39%), Positives = 251/424 (59%), Gaps = 24/424 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR++ + GS IP+P+ + E +L V++ G+ +P+ IQ P+ L RD++
Sbjct: 83 FRKENQMQCTGSDIPKPITTFDEASFPDYVLTEVKKQGFPSPTAIQCQGWPMALSGRDMV 142
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA TGSGKT ++ LP + +I+ P +S +GP +V+APTRELA QI++E KF
Sbjct: 143 GIAATGSGKTLSYCLPGIVHINAQPLLSP---GDGPIVLVLAPTRELAVQIQQECSKFGR 199
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I+ I GG Q + +G E+ IATPGRLID LE L + Y+VLDEADR
Sbjct: 200 TSRIRNTCIYGGAPKGPQIRDLARGVEICIATPGRLIDMLEMNKTNLRRVTYLVLDEADR 259
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D ++P+ R T M+SAT P V+ LAR YL
Sbjct: 260 MLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQNLARDYLN 302
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDEL---GDKTAIVFVNTKKNAD 528
+P+ V +G+ A+ I+Q V ++ E EK RL + L+ + ++F +TKK D
Sbjct: 303 DPIQVRVGSLELAASHTITQLVEVVSEFEKRDRLIKHLETATTDNEAKVLIFASTKKTCD 362
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ + L G+ +HG K Q +R+ L+ F+T + ++VATDVA RGID+ +++VIN
Sbjct: 363 EITRYLRSDGWPALAIHGDKQQAERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVIN 422
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
DMPGNIE Y HRIGRTGRAG TG A +F T ++ + DL +++ ++ +PPEL +++
Sbjct: 423 LDMPGNIEDYVHRIGRTGRAGTTGTAVSFFTEANSKLGGDLCKIMREAKQTIPPELMRYD 482
Query: 649 ASKF 652
F
Sbjct: 483 RRGF 486
>gi|313235130|emb|CBY25002.1| unnamed protein product [Oikopleura dioica]
Length = 653
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 256/442 (57%), Gaps = 30/442 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P + ++ +L P + V+ Y P+P+Q A+P+ RD++
Sbjct: 181 DDIPVETSGENVPACIDDFVSAELGPIITENVKLAHYTVPTPVQKYAVPIIHAGRDIMSC 240
Query: 295 AETGSGKTAAFVLPMLTYISRLP---PISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
A+TGSGKTAAF++PML+ I P P + +A P A+V++PTREL QI +E +KFA
Sbjct: 241 AQTGSGKTAAFLMPMLSNIFHNPGKIPRHQSRKAY-PLALVLSPTRELTNQIYQEALKFA 299
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
+ ++ I GG + EQ + +GC +++ATPGRL D LER L C ++ LDEAD
Sbjct: 300 YRSKVRPCVIYGGADVGEQLRDLSRGCHLLVATPGRLADFLERGKVGLEFCRFLCLDEAD 359
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY---RTTYMFSATMPPAVERLAR 468
RM+DMGFEPQ+ ++ EK I+ R T MFSAT P ++ LA
Sbjct: 360 RMLDMGFEPQIRRII------------------EKVIFPSDRQTLMFSATFPKQIQALAS 401
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNAD 528
+L N + + +G G + I+Q ++E+EK +L LL+ + IVF TKK AD
Sbjct: 402 DFLDNYIFLAVGRVGSTSANITQRFEYVQETEKVRKLCELLENGQEMLTIVFTETKKGAD 461
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ L + GY+ T +HG ++Q++RE ++ F++ + +LVAT VA RG+DIP+V HVIN
Sbjct: 462 YLDHFLHERGYQSTCIHGDRNQQEREEAVHLFKSGQTPILVATAVAARGLDIPNVRHVIN 521
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
+D+P I+ Y HRIGRTGRAG TG AT F + + DL Q+L ++ VP +L K
Sbjct: 522 FDLPSEIDEYVHRIGRTGRAGNTGWATAFYNEKNAKISDDLLQLLTEAKQEVPSKL-KDI 580
Query: 649 ASKFKPGTIPDRPPRRNDTVFA 670
A ++ +RP R N V+A
Sbjct: 581 ARSYR----DNRPVRPNGGVYA 598
>gi|281342094|gb|EFB17678.1| hypothetical protein PANDA_018093 [Ailuropoda melanoleuca]
Length = 613
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 108 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 165
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 166 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 225
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 226 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 281
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 282 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 341
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 342 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 384
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 385 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 443
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 444 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 503
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 504 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 554
>gi|403263529|ref|XP_003924079.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Saimiri
boliviensis boliviensis]
Length = 661
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 163 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|395505230|ref|XP_003756946.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Sarcophilus
harrisii]
Length = 624
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHW-SEKKLEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W + + + M+E R+ ++I +G
Sbjct: 119 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWKAPRYVLSMSEARHDRVRKKYHILVEGE 176
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 177 GIPPPLKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 236
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 237 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 292
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 293 PLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 352
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 353 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 395
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 396 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 454
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 455 LLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 514
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 515 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 565
>gi|410949088|ref|XP_003981256.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Felis catus]
Length = 622
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|222617918|gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japonica Group]
Length = 468
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 251/423 (59%), Gaps = 48/423 (11%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ +G +P+P+R + + +L+ + + G+ P+PIQ P+
Sbjct: 65 MTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 125 ALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 181
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF G E+VIATPGRLID +E + L + Y
Sbjct: 182 QEATKF--------------------------GVEIVIATPGRLIDMIESHHTNLRRVTY 215
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 216 LVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPKEVE 258
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR +L +P V IG+ KA ISQHV ++ ES+K+++L LL+++ D + I +F++
Sbjct: 259 QLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMD 318
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 319 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 378
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + DL +L ++ V P
Sbjct: 379 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSP 438
Query: 643 ELA 645
ELA
Sbjct: 439 ELA 441
>gi|358335026|dbj|GAA28925.2| probable ATP-dependent RNA helicase DDX46, partial [Clonorchis
sinensis]
Length = 746
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 241/405 (59%), Gaps = 29/405 (7%)
Query: 222 LEEMTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ D + +R NI +G P+P++NW + ++ LL ++R + P+PIQ
Sbjct: 326 LAKMSKEDVKAYRASLENIRVRGQDCPKPLKNWVQAGISSRLLSCLKRNNFDKPTPIQCQ 385
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
A+P+ + RD+IGIA+TGSGKT AF++P++ ++ P+ +GP A+++APTRELA
Sbjct: 386 ALPVLMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQDPL---EPGDGPIALLLAPTRELA 442
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI +E K A + +VV + GG I EQ +++G E+++ TPGR+ID L R
Sbjct: 443 LQIFKEAKKLAQAVDARVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRVT 502
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L +C Y+VLDEADRM D+GFEPQV+ +++ N +P+ R T MFSA
Sbjct: 503 NLRRCTYIVLDEADRMFDLGFEPQVMRIVE-----NCRPD------------RQTAMFSA 545
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL---DELGD 514
T P +E LARK L P+ + +G + QH +++ E EKF ++ LL E G
Sbjct: 546 TFPRLMELLARKALTLPIEIQVGGRSVVCSDVEQHALVLTEDEKFYKVLELLGIYQEAG- 604
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ ++FV +++AD + + L K GY +LHGG Q R+ + F+ +L+AT VA
Sbjct: 605 -SVLIFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVMTDFKRGNIRLLIATSVA 663
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RG+D+ D+ VINYD P + E Y HR GRTGRAG G A TFLT
Sbjct: 664 ARGLDVSDLMVVINYDCPNHYEDYVHRCGRTGRAGNKGFAYTFLT 708
>gi|348536964|ref|XP_003455965.1| PREDICTED: putative ATP-dependent RNA helicase an3-like
[Oreochromis niloticus]
Length = 704
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 250/428 (58%), Gaps = 33/428 (7%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G P+ + ++ + + ++ + Y P+P+Q AIP+ +RD++
Sbjct: 205 DDIPVEATGQNCPQHIESFQDVDMGEIIMGNIALSRYTRPTPVQKYAIPIIKSKRDLMAC 264
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG---------------PYAVVMAPTREL 339
A+TGSGKTAAF+LP+L+ I P N A+ P ++V+APTREL
Sbjct: 265 AQTGSGKTAAFLLPVLSQIYTDGPGEALNAAKASGQQENGKYGRRKQYPISLVLAPTREL 324
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
A QI +E KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L
Sbjct: 325 ALQIYDEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGL 384
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
+ CNY+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSA
Sbjct: 385 DYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGI---------------RQTMMFSA 429
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKT 516
T P ++ LAR +L + + + +G G +E I+Q VV ++ES+K S L LL G D
Sbjct: 430 TFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLSATGKDSL 489
Query: 517 AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGR 576
+VFV TKK AD + L + GY T++HG +SQ RE +L FR+ + +LVAT VA R
Sbjct: 490 TLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAAR 549
Query: 577 GIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS 636
G+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++
Sbjct: 550 GLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEA 609
Query: 637 NSPVPPEL 644
VP L
Sbjct: 610 KQEVPSWL 617
>gi|218187683|gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
Length = 470
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 251/423 (59%), Gaps = 48/423 (11%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ +G +P+P+R + + +L+ + + G+ P+PIQ P+
Sbjct: 67 MTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 126
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 127 ALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 183
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF G E+VIATPGRLID +E + L + Y
Sbjct: 184 QEATKF--------------------------GVEIVIATPGRLIDMIESHHTNLRRITY 217
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 218 LVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPKEVE 260
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR +L +P V IG+ KA ISQHV ++ ES+K+++L LL+++ D + I +F++
Sbjct: 261 QLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMD 320
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 321 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 380
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + DL +L ++ V P
Sbjct: 381 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSP 440
Query: 643 ELA 645
ELA
Sbjct: 441 ELA 443
>gi|129277522|ref|NP_001076071.1| probable ATP-dependent RNA helicase DDX41 [Bos taurus]
gi|126717403|gb|AAI33466.1| DDX41 protein [Bos taurus]
gi|296485512|tpg|DAA27627.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Bos taurus]
Length = 622
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|226487070|emb|CAX75400.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487074|emb|CAX75402.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487078|emb|CAX75404.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
Length = 768
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/413 (39%), Positives = 247/413 (59%), Gaps = 21/413 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR+ + +S G +PRP+ ++ E + +L + + G++ P+PIQ P+ L RDV+
Sbjct: 71 FRKKYKMSLSGRDVPRPVLSFNELSVPDYILSVIAKNGWQLPTPIQSQGWPMALSGRDVV 130
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTA F+LP + +I P + EGP +V+ PTRELAQQ+ +FA
Sbjct: 131 GIAQTGSGKTATFLLPAVIHIMAQPRLLRN---EGPICLVLVPTRELAQQVLSVAKEFAD 187
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++ + GG + Q +++G E+ IATPGRLID + + +L++ Y+VLDEADR
Sbjct: 188 AASLRAICFYGGSAKGTQLREMQKGGEICIATPGRLIDFIRVQRNLLSRVTYLVLDEADR 247
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +L S+++P+ R T M+SAT P V+ LAR++L
Sbjct: 248 MLDMGFEPQIRKIL-----SHVRPD------------RQTLMWSATWPKEVQTLAREFLT 290
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVA 531
+ + V IG+ A I+Q V +M + K RL LL G +VFV TK+ D +
Sbjct: 291 DYIQVNIGSVSLHANPNITQIVEIMDDWRKEQRLIELLSSFGRSRTLVFVETKRRTDQLT 350
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
+L + G+ V +HGGK Q RE++L F++ R N+L+ATDVA RG+DI ++ +V+N+D
Sbjct: 351 NSLRRRGFYVEAMHGGKQQRDRELTLASFKSGRMNILIATDVASRGLDIDNIEYVVNFDF 410
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P E Y HRIGRT R+ K G A TF T+ + DL ++L ++N + PEL
Sbjct: 411 PNQTEDYIHRIGRTARSDKRGTAFTFFTYKNARQARDLIEILDEANQEITPEL 463
>gi|326531018|dbj|BAK04860.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531744|dbj|BAJ97876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 415
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/414 (41%), Positives = 248/414 (59%), Gaps = 23/414 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+ + I G +PRP++N+ + L+ A+ + GY+ P+ IQ A+P+ L RD+I
Sbjct: 22 YMKSLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDII 81
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA+TGSGKTAAFVLPM+ +I P + +E EGP V+ APTRELA QI E KFA
Sbjct: 82 GIAKTGSGKTAAFVLPMIVHIMDQPELQKE---EGPIGVICAPTRELAHQIYLEAKKFAK 138
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
++V ++ GG S EQ ++ GCE+V+ATPGRLID L+ + + + Y VLDEADR
Sbjct: 139 PYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLLKMKALRMFRATYSVLDEADR 198
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M D+GFEPQ+ ++ ++P+ R T +FSATMP VERLAR+ L
Sbjct: 199 MFDLGFEPQIRSIV-----GQIRPD------------RQTLLFSATMPYKVERLAREILT 241
Query: 473 NPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDELGDKTAIVFVNTKKNADMV 530
+ + VT+G G A E I Q V V+ ++EK L+++ + D +VF K D V
Sbjct: 242 DLIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKMPGMIDDGDVLVFATKKARVDEV 301
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
L++ G++V LHG K Q R +L+ F++ Y+VLVATDVA RG+DI + V+N+D
Sbjct: 302 ENQLNQHGFKVAALHGDKDQASRMETLQKFKSGIYHVLVATDVAARGLDIKSIKTVVNFD 361
Query: 591 MPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
+ ++M+ HRIGRTGRAG K G A T +T ++ +L LI + VP E
Sbjct: 362 IAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKESRFAGELVHSLIAAGQDVPNE 415
>gi|167525138|ref|XP_001746904.1| p68DDX5 RNA helicase [Monosiga brevicollis MX1]
gi|163774684|gb|EDQ88311.1| p68DDX5 RNA helicase [Monosiga brevicollis MX1]
Length = 487
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 246/424 (58%), Gaps = 25/424 (5%)
Query: 226 TERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLG 285
T+ D + FR IS +G +P+P+ + ++ + R G+ P+PIQ P+
Sbjct: 36 TDEDVQNFRASHQISVEGRDVPKPITTFERASFPAYVMDVLMREGFSTPTPIQAQGWPMA 95
Query: 286 LQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEE 345
L R+++G+A+TGSGKT +F+LP + +I+ P + +GP A+V+APTRELAQQI E
Sbjct: 96 LAGRNMVGVADTGSGKTLSFILPAIVHINNQPLL---RPGDGPIALVLAPTRELAQQIAE 152
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
K+ IK + GG Q + +G E++I TPGRLID L+ R L +C Y+
Sbjct: 153 VAHKYGSSSRIKTTCVFGGAPKRGQAMDLERGVELLIGTPGRLIDFLDTRKTNLRRCTYL 212
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ S ++P+ R T M+SAT P V++
Sbjct: 213 VLDEADRMLDMGFEPQLRKIV-----SQIRPD------------RQTLMWSATWPKEVQQ 255
Query: 466 LARKYLRNPVV-VTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDEL---GDKTAIVF 520
LA ++L V+ V IG G A I QHV++M++ +K L RLLDE+ + I+F
Sbjct: 256 LAYEFLGQDVIRVQIGAIGLSANHRIKQHVMIMQDYDKQRELFRLLDEIMRQKENKTIIF 315
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
TK+N D + +NL + G+ +HG K Q +R+ L FR R+ +L+ATDVA RG+D+
Sbjct: 316 AETKRNVDDLTRNLRREGFPAMCMHGDKQQRERDTVLAEFRDGRHPILIATDVASRGLDV 375
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
D+ +VIN+D P N E Y HRIGRT R G G A TF + + DL +L ++ +
Sbjct: 376 KDIKYVINFDYPNNSEDYVHRIGRTARGGGEGTAYTFFSSKNARQAKDLVSVLEEAKQEI 435
Query: 641 PPEL 644
P EL
Sbjct: 436 PREL 439
>gi|451998444|gb|EMD90908.1| hypothetical protein COCHEDRAFT_1176468 [Cochliobolus
heterostrophus C5]
Length = 659
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 250/421 (59%), Gaps = 26/421 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL +E GYK P+P+Q +IP+ + RD++
Sbjct: 157 DDIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMAC 216
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG---------PYAVVMAPTRELAQQIEE 345
A+TGSGKT F+ P+L + P A+G P ++V+APTREL QI +
Sbjct: 217 AQTGSGKTGGFLFPILAQAFQNGPAPPPPSAQGGYGRQRKAYPTSLVLAPTRELVSQIFD 276
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+
Sbjct: 277 EARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYL 336
Query: 406 VLDEADRMIDMGFEPQVVGVLDA--MPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
VLDEADRM+DMGFEPQ+ +++ MP + R T MFSAT P +
Sbjct: 337 VLDEADRMLDMGFEPQIRRIVEGEDMPPT---------------AGRQTLMFSATFPRDI 381
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNT 523
+ LAR +L++ + +++G G +E I+Q + +++++K S L +L G +++FV T
Sbjct: 382 QMLARDFLKDYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDILHTHGVGLSLIFVET 441
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD ++ L G+ T++HG ++Q +RE +LE FR+ R +LVAT VA RG+DIP+V
Sbjct: 442 KRMADSLSDFLINQGFPATSIHGDRTQREREKALEMFRSGRCPLLVATAVAARGLDIPNV 501
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
HV+NYD+P +I+ Y HRIGRTGRAG TG+AT F + V DL ++L ++N VP
Sbjct: 502 KHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIELLKEANQEVPSF 561
Query: 644 L 644
L
Sbjct: 562 L 562
>gi|395837035|ref|XP_003791451.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Otolemur
garnettii]
Length = 621
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 116 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLNMSEERHERVRKKYHILVEGD 173
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 174 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 233
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 234 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 289
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 290 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 349
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 350 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 392
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 393 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 451
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 452 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 511
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 512 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 562
>gi|350629482|gb|EHA17855.1| hypothetical protein ASPNIDRAFT_55865 [Aspergillus niger ATCC 1015]
Length = 1198
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 256/446 (57%), Gaps = 32/446 (7%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+TF R + L +M++ + R + + I +G +P+P++ W++ L + L
Sbjct: 521 YETF--RKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLD 578
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
++++GY+ + IQ AIP + RDVIG+A+TGSGKT AF++PM +I P+ +
Sbjct: 579 VIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL---DN 635
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP ++M PTRELA QI ++ F L ++ V GG I++Q +++G E+++ T
Sbjct: 636 MEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCT 695
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ ++ +N++P+
Sbjct: 696 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD---- 746
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P +E LARK L P+ + +G I+Q V + + +K
Sbjct: 747 --------RQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQK 798
Query: 502 FSRLQRLL------DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
F RL LL DE D A++FV+ ++ AD + + L + GY ++HGGK Q R+
Sbjct: 799 FVRLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDS 858
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
++E F+ + VL+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 859 TIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAV 918
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP 641
TFLT D+ + L QS VP
Sbjct: 919 TFLTEDQERYSVDIAKALKQSGQKVP 944
>gi|399216152|emb|CCF72840.1| unnamed protein product [Babesia microti strain RI]
Length = 561
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/396 (39%), Positives = 233/396 (58%), Gaps = 15/396 (3%)
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P+ ++ + LL+ + +V Y P+PIQ +I +RD++ A+TGSGKTAAF+LP
Sbjct: 123 PIERFSVDTIHELLLKNIIKVNYTTPTPIQKHSIAAIRARRDLMACAQTGSGKTAAFLLP 182
Query: 309 MLT---YISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQ 365
++T Y PP+ P +V++PTRELA QI E KF GI+ V + GG
Sbjct: 183 IMTSMLYEGPPPPVQSRTRCTFPVCLVLSPTRELAIQIYNEARKFNFGTGIRTVVLYGGS 242
Query: 366 SIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
+ Q F + +GC+V +ATPGRL D +ERR Y+VLDEADRM+DMGF PQ+ +
Sbjct: 243 EVRAQLFDLEKGCDVCVATPGRLTDLVERRKVNFTSVKYLVLDEADRMLDMGFSPQIRAI 302
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
+ ED + R T MFSAT P ++ LA+ +LR+ + +T+G G
Sbjct: 303 V------------EDNGMPTSMEGRQTVMFSATFPREIQILAKDFLRDYIYLTVGRVGST 350
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLH 545
E I Q V + +K L +LL+E + ++FV TK+ ADM+ L + ++H
Sbjct: 351 NEFIRQRVQYAGQDQKAKYLVKLLNENSNGLVLIFVETKRRADMIEAYLLNENFLAVSIH 410
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
G +SQ+ RE +L F+T + +LVATDVA RG+DI ++ HVIN D+P NI+ Y HRIGRT
Sbjct: 411 GDRSQQDREEALRLFKTGKRPILVATDVAARGLDISNITHVINCDLPSNIDDYVHRIGRT 470
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
GRAG G+AT+F+ ++ + DL +L ++N +P
Sbjct: 471 GRAGNFGLATSFVNENNRTILKDLLALLEEANQEIP 506
>gi|74191640|dbj|BAE30391.1| unnamed protein product [Mus musculus]
Length = 622
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDSLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|134076811|emb|CAK39865.1| unnamed protein product [Aspergillus niger]
Length = 1191
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 256/446 (57%), Gaps = 32/446 (7%)
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLR 264
Y+TF R + L +M++ + R + + I +G +P+P++ W++ L + L
Sbjct: 514 YETF--RKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLD 571
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE 324
++++GY+ + IQ AIP + RDVIG+A+TGSGKT AF++PM +I P+ +
Sbjct: 572 VIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL---DN 628
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIAT 384
EGP ++M PTRELA QI ++ F L ++ V GG I++Q +++G E+++ T
Sbjct: 629 MEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCT 688
Query: 385 PGRLIDCLER---RYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
PGR+ID L R L + YVVLDEADRM DMGFEPQV+ ++ +N++P+
Sbjct: 689 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD---- 739
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
R T +FSAT P +E LARK L P+ + +G I+Q V + + +K
Sbjct: 740 --------RQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQK 791
Query: 502 FSRLQRLL------DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREI 555
F RL LL DE D A++FV+ ++ AD + + L + GY ++HGGK Q R+
Sbjct: 792 FVRLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDS 851
Query: 556 SLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVAT 615
++E F+ + VL+AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A
Sbjct: 852 TIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAV 911
Query: 616 TFLTFHDTDVFYDLKQMLIQSNSPVP 641
TFLT D+ + L QS VP
Sbjct: 912 TFLTEDQERYSVDIAKALKQSGQKVP 937
>gi|270047502|ref|NP_598820.2| probable ATP-dependent RNA helicase DDX41 [Mus musculus]
gi|341940433|sp|Q91VN6.2|DDX41_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX41; AltName:
Full=DEAD box protein 41
gi|74142777|dbj|BAE33914.1| unnamed protein product [Mus musculus]
Length = 622
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|380798911|gb|AFE71331.1| putative ATP-dependent RNA helicase DDX41, partial [Macaca mulatta]
Length = 606
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 101 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 158
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 159 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 218
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 219 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 274
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 275 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 334
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 335 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 377
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 378 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 436
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 437 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 496
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 497 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEARQKVPPVL 547
>gi|451848629|gb|EMD61934.1| hypothetical protein COCSADRAFT_162462 [Cochliobolus sativus
ND90Pr]
Length = 679
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 164/416 (39%), Positives = 247/416 (59%), Gaps = 22/416 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL +E GYK P+P+Q +IP+ + RD++
Sbjct: 173 DDIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMAC 232
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG---------PYAVVMAPTRELAQQIEE 345
A+TGSGKT F+ P+L + P A+G P ++V+APTREL QI +
Sbjct: 233 AQTGSGKTGGFLFPILAQAFQNGPAPPPASAQGGYGRQRKAYPTSLVLAPTRELVSQIFD 292
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+
Sbjct: 293 EARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLASIKYL 352
Query: 406 VLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
VLDEADRM+DMGFEPQ+ ++ E ED R T MFSAT P ++
Sbjct: 353 VLDEADRMLDMGFEPQIRRIV----------EGEDMPPTAGR---QTLMFSATFPRDIQM 399
Query: 466 LARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKK 525
LAR +L+ + +++G G +E I+Q + +++++K S L +L G +++FV TK+
Sbjct: 400 LARDFLKEYIFLSVGRVGSTSENITQKIEYVEDADKRSVLLDILHTHGVGLSLIFVETKR 459
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD ++ L G+ T++HG ++Q +RE +LE FR+ R +LVAT VA RG+DIP+V H
Sbjct: 460 MADSLSDFLINQGFPATSIHGDRTQREREKALEMFRSGRCPLLVATAVAARGLDIPNVKH 519
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
V+NYD+P +I+ Y HRIGRTGRAG TG+AT F + V DL ++L ++N VP
Sbjct: 520 VVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLLELLKEANQEVP 575
>gi|452980168|gb|EME79929.1| hypothetical protein MYCFIDRAFT_141983 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/415 (39%), Positives = 246/415 (59%), Gaps = 21/415 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ ++ L LL ++ GYK P+P+Q +IP+ + RD++
Sbjct: 115 DDIPVEASGQGVPEPVTSFTNPPLDDHLLSNIDLAGYKMPTPVQKYSIPIVMSGRDLMAC 174
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P + G P ++++APTREL QI +E
Sbjct: 175 AQTGSGKTGGFLFPILSQAYQNGPSGSVPQQSGFARQRKAYPTSLILAPTRELVSQIYDE 234
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+V
Sbjct: 235 ARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLANIKYLV 294
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ ++ E ED E R T MFSAT P ++ L
Sbjct: 295 LDEADRMLDMGFEPQIRRIV----------EGEDMPPTEGR---QTLMFSATFPRDIQLL 341
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +LR + +++G G +E I+Q V +++ +K S L +L G ++FV TK+
Sbjct: 342 ARDFLREYIFLSVGRVGSTSENITQKVEYVEDIDKRSVLLDILHTHGAGLTLIFVETKRM 401
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD ++ L G+ T++HG ++Q +RE +LE FR+ R +LVAT VA RG+DIP+V HV
Sbjct: 402 ADSLSDYLINQGFPATSIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVMHV 461
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+NYD+P +I+ Y HRIGRTGRAG TG++T F + V DL +L ++N VP
Sbjct: 462 VNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGNRGVVRDLIDLLKEANQEVP 516
>gi|396484726|ref|XP_003842000.1| hypothetical protein LEMA_P077600.1 [Leptosphaeria maculans JN3]
gi|312218576|emb|CBX98521.1| hypothetical protein LEMA_P077600.1 [Leptosphaeria maculans JN3]
Length = 679
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 247/421 (58%), Gaps = 26/421 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL +E GYK P+P+Q +IP+ + RD++
Sbjct: 177 DDIPVEASGQGVPEPVTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMAC 236
Query: 295 AETGSGKTAAFVLPMLTY-ISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEE 345
A+TGSGKT F+ P+L P +++A G P ++V+APTREL QI E
Sbjct: 237 AQTGSGKTGGFLFPILAQNFVNGPSPPPQSQAGGYGRQRKAYPTSLVLAPTRELVSQIFE 296
Query: 346 ETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
E KFA+ ++ + GG I Q +I +GC++++ATPGRL+D +ER L Y+
Sbjct: 297 EARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLANIKYL 356
Query: 406 VLDEADRMIDMGFEPQVVGVLDA--MPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
VLDEADRM+DMGFEPQ+ +++ MP + R T MFSAT P +
Sbjct: 357 VLDEADRMLDMGFEPQIRRIVEGEDMPPT---------------AARQTLMFSATFPRDI 401
Query: 464 ERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNT 523
+ LAR +L+ + +++G G +E I+Q V +++++K S L +L G ++FV T
Sbjct: 402 QMLARDFLKEYIFLSVGRVGSTSENITQKVEYVEDADKRSVLLDILHTHGAGLTLIFVET 461
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD ++ L G+ T++HG ++Q +RE +LE FR R +LVAT VA RG+DIP+V
Sbjct: 462 KRMADSLSDFLINQGFPATSIHGDRTQREREKALEMFRNGRCPILVATAVAARGLDIPNV 521
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
HV+NYD+P +I+ Y HRIGRTGRAG TG+AT F + V DL +L ++N VP
Sbjct: 522 KHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLLDLLKEANQEVPSF 581
Query: 644 L 644
L
Sbjct: 582 L 582
>gi|157126319|ref|XP_001654592.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882564|gb|EAT46789.1| AAEL002083-PA [Aedes aegypti]
Length = 699
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/458 (37%), Positives = 255/458 (55%), Gaps = 36/458 (7%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ ++E D + + I+ KG IPRP + +G L +L + G+ P+ IQ
Sbjct: 93 ISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEANKQGFSKPTAIQAQG 152
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
+P+ L RD++GIA+TGSGKT A++ P L +I+ + +GP A+V+APTRELAQ
Sbjct: 153 MPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQ---DQLRRGDGPIALVLAPTRELAQ 209
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI++ F + + GG Q + +G E+VIATPGRLID LER L +
Sbjct: 210 QIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRR 269
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
C Y+VLDEADRM+DMGFEPQ+ ++ ++P+ R M+SAT P
Sbjct: 270 CTYLVLDEADRMLDMGFEPQIRKIM-----GQIRPD------------RQVLMWSATWPK 312
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG---DKTA 517
V LA ++L + + + IG+ A I Q V + ++ EK +L +LL E+ +
Sbjct: 313 EVRNLAEEFLNDYIQINIGSLNLSANHNILQIVDVCEDYEKDQKLMKLLTEISAENETKT 372
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
I+FV TK+ D + +N+++ G+R ++HG KSQ++R+ L FR R +LVATDVA RG
Sbjct: 373 IIFVETKRRVDDITRNINRNGWRAVSIHGDKSQQERDYVLNAFRNGRQGILVATDVAARG 432
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+D+ DV VINYD P N E Y HRIGRTGR+ TG A T T + + DL +L ++N
Sbjct: 433 LDVEDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAGDLINVLREAN 492
Query: 638 SPVPPELA------------KHEASKFKPGTIPDRPPR 663
+ P+LA +H + G +RPPR
Sbjct: 493 QVINPKLAEMAKPGMNRHGQRHNRYGNRYGGQQNRPPR 530
>gi|67521618|ref|XP_658870.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|74657573|sp|Q5BDW4.1|PRP5_EMENI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|40746703|gb|EAA65859.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|259488412|tpe|CBF87827.1| TPA: Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BDW4]
[Aspergillus nidulans FGSC A4]
Length = 1173
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/435 (39%), Positives = 253/435 (58%), Gaps = 30/435 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M+E + R + + I +G +P+P++ W++ L + L ++++G+ + + IQ
Sbjct: 511 LAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQ 570
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ EN EGP ++M PTRELA
Sbjct: 571 AIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPL--EN-MEGPIGLIMTPTRELA 627
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 628 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVT 687
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ +L SN++P+ R T +FSA
Sbjct: 688 NLRRVTYVVLDEADRMFDMGFEPQVMKIL-----SNVRPD------------RQTVLFSA 730
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L P+ + +G I+Q V + E +KF RL LL DE
Sbjct: 731 TFPRNMEALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDE 790
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D +++FV+ ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 791 NEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 850
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 851 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAK 910
Query: 632 MLIQSNSPVPPELAK 646
L QS VP + K
Sbjct: 911 ALKQSGQEVPEAVQK 925
>gi|15030112|gb|AAH11308.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Mus musculus]
Length = 622
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPGL 563
>gi|348575047|ref|XP_003473301.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Cavia
porcellus]
Length = 622
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|212275354|ref|NP_001130628.1| uncharacterized protein LOC100191727 [Zea mays]
gi|194689682|gb|ACF78925.1| unknown [Zea mays]
gi|413943771|gb|AFW76420.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 614
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 34/447 (7%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
LE + + R+ + D + G P P + L +LR V R GY++P+P+Q A
Sbjct: 51 LEIGGDGERRLDKYDMPVDVSGKGAPGPADGFEAAGLAEAVLRNVARCGYESPTPVQRYA 110
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENE------------AEGPY 329
+P+ + RD++ A+TGSGKTAAF LP+++ + + P N A P
Sbjct: 111 MPIVMAGRDLMACAQTGSGKTAAFCLPVVSGL--VAPAGGGNGHGPRDRGSFDRVAAKPR 168
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
A+V+APTRELA QI EE KF+ G++VV GG + Q + +G ++++ATPGRL+
Sbjct: 169 ALVLAPTRELAAQINEEAKKFSFQTGLRVVVAYGGTPMFSQLRDLEKGVDLLVATPGRLV 228
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
D +ER L Y+V+DEADRM++MGFEPQ+ ++D M N+ K+
Sbjct: 229 DLVERSRISLEAIKYLVMDEADRMLNMGFEPQIRKIVDMM---NMP----------KKSV 275
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL 509
R T +FSAT PP ++RLA +L N + VT+G G +T+LI Q + + EK L +L
Sbjct: 276 RQTMLFSATFPPEIQRLATDFLHNYIFVTVGRVGSSTDLIDQKIEFVNGGEKRGFLLDIL 335
Query: 510 DE--LG-----DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
+ +G +VFV TK+ AD + L G+ T++HG ++Q++RE +L+ F++
Sbjct: 336 QKQSVGLSKNKQPLTLVFVETKREADSLQYCLQSNGFSATSIHGDRTQQERERALKSFKS 395
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+LVATDVA RG+D+P+VAHVINYD+P +I+ Y HRIGRTGRAGK G AT T +
Sbjct: 396 GATPILVATDVASRGLDVPNVAHVINYDLPKSIDDYVHRIGRTGRAGKAGKATALFTESN 455
Query: 623 TDVFYDLKQMLIQSNSPVPPELAKHEA 649
+ DL +++ + VP L + +
Sbjct: 456 HHLAKDLLELMTGAKQDVPEWLGDYAS 482
>gi|50292931|ref|XP_448898.1| hypothetical protein [Candida glabrata CBS 138]
gi|74664283|sp|Q8TFK8.1|DED1_CANGA RecName: Full=ATP-dependent RNA helicase DED1
gi|20086311|gb|AAM08102.1| DED1p [Candida glabrata]
gi|49528211|emb|CAG61868.1| unnamed protein product [Candida glabrata]
Length = 617
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 244/418 (58%), Gaps = 22/418 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P + + L LL ++ + P+P+Q ++P+ + RD++
Sbjct: 129 DDIPVEASGEDVPEAITEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMAC 188
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ S L +E+ +G P AVVMAPTRELA QI +E
Sbjct: 189 AQTGSGKTGGFLFPVLSE-SFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQIFDE 247
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q + GC++++ATPGRL D LER L+ Y+V
Sbjct: 248 AKKFCYRSWVKPCVVYGGAPIGNQMREMDHGCDLLVATPGRLNDLLERGKVSLSNVKYLV 307
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 308 LDEADRMLDMGFEPQIRHIVE---DCDMPPTGE----------RQTLMFSATFPHDIQHL 354
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q ++ ++ +K S L LL D ++FV TK+
Sbjct: 355 ARDFLHDYIFLSVGRVGSTSENITQRILYVENRDKNSALLDLLAASNDNLTLIFVETKRM 414
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L + T +HG +SQ +RE +L FR+ R N+LVAT VA RG+DIP+V HV
Sbjct: 415 ADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTHV 474
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
INYD+P +++ Y HRIGRTGRAG TGVAT F + ++ L ++L ++N +PP L
Sbjct: 475 INYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEIPPFL 532
>gi|308807146|ref|XP_003080884.1| DEAD box protein P68 (ISS) [Ostreococcus tauri]
gi|116059345|emb|CAL55052.1| DEAD box protein P68 (ISS) [Ostreococcus tauri]
Length = 571
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/399 (43%), Positives = 240/399 (60%), Gaps = 30/399 (7%)
Query: 247 PRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFV 306
P + ++ + +L ++L ++ Y PSPIQ AIP+ L RDV+G AETGSGKTAAF
Sbjct: 107 PSAIESFEDMELKRDILADIKFREYDKPSPIQAQAIPVILSGRDVLGCAETGSGKTAAFS 166
Query: 307 LPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL-GIKVVSIVGGQ 365
+PM+ + P+ + +GP+A+VMAPTRELAQQIE E F G + IVGG
Sbjct: 167 IPMIQHALNQAPL---RQGDGPFAIVMAPTRELAQQIETEAKTFTRSSKGFRTAIIVGGT 223
Query: 366 SIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
++ EQ +R G ++V+ATPGRLID L++ L + ++VVLDEADRM+DMGFEPQ+ V
Sbjct: 224 NMSEQRSMLRGGVQIVVATPGRLIDHLQQGNTNLARVSFVVLDEADRMLDMGFEPQIREV 283
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
L +P KP T +FSATMP VE LA YL PV V +G
Sbjct: 284 LMNLP----KPHQ-------------TLLFSATMPVEVEALAADYLNKPVKVKVGQTSAP 326
Query: 486 TELISQHVVMMKESEKFSRL-------QRLLDELGDKT--AIVFVNTKKNADMVAKNLDK 536
T +SQ + + ++EK RL QR +LG +VFV K AD +A+ L+
Sbjct: 327 TANVSQQLEKVVDAEKVDRLVTMLISEQREAQKLGHSMPMTVVFVERKHRADEIAELLNA 386
Query: 537 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 596
LHGG+SQ +RE +L ++T R +VLVATDVA RG+D+ VAHV+N D+P N E
Sbjct: 387 ENVSAAALHGGRSQGEREAALHDYKTGRCSVLVATDVAARGLDVKGVAHVVNLDLPRNFE 446
Query: 597 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
Y HRIGRTGRAG +G +T+F T D+ + +K+ L++
Sbjct: 447 DYVHRIGRTGRAGMSGRSTSFYTDRDSFIVAQIKRALME 485
>gi|148709265|gb|EDL41211.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Mus musculus]
Length = 633
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 128 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGD 185
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 186 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 245
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 246 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 301
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 302 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 361
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 362 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 404
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 405 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 463
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 464 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 523
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 524 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 574
>gi|312074866|ref|XP_003140162.1| ATP-dependent RNA helicase An3 [Loa loa]
gi|307764673|gb|EFO23907.1| ATP-dependent RNA helicase An3 [Loa loa]
Length = 603
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 263/442 (59%), Gaps = 29/442 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+ + GS +PRP + E +L P + +++ GY P+P+Q +IP L RD++
Sbjct: 37 EEIPVEATGSDVPRPCTVFDELQLHPLIQENIKKSGYTKPTPVQKYSIPSLLSCRDLMSC 96
Query: 295 AETGSGKTAAFVLPMLTYI-------SRLPPI-SEENEAEGPYAVVMAPTRELAQQIEEE 346
A+TGSGKTAAF++P++ +I R+P + S P ++++PTRELA Q +E
Sbjct: 97 AQTGSGKTAAFLVPVINHIIRNESTTMRMPQVMSTSRRTVFPVVLILSPTRELAMQTHKE 156
Query: 347 TVKFAHYLGIKVVSIVGG-QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYV 405
+KFA+ + + GG ++ +Q ++ GC ++IATPGRL+D + + L+ C ++
Sbjct: 157 ALKFAYRTNVISAVLYGGRENYRDQVQKLTLGCHLLIATPGRLLDVMSQNVVSLHDCRFL 216
Query: 406 VLDEADRMIDMGFEPQVVGVLD--AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAV 463
VLDEADRM+DMGFEPQ+ +++ +MP K+ R T MFSAT P +
Sbjct: 217 VLDEADRMLDMGFEPQIRQIVECHSMP---------------KKGQRVTAMFSATFPKEI 261
Query: 464 ERLARKYLR-NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKTAIVFV 521
+ LA+ +L N V + +G G +E I Q ++ ++E +K L LLD ++ A+VFV
Sbjct: 262 QILAQDFLMANYVFLAVGRVGSTSENIVQKIIWVEEHDKKRLLMELLDIDVNRGLALVFV 321
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TK+ A+ +A L + Y V +HG Q +RE LE FR+ + N+LVAT VA RG+DIP
Sbjct: 322 ETKRGANDLAWYLQRNNYNVMPIHGDLKQYERERHLEMFRSGQTNILVATAVAARGLDIP 381
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +I+ Y HRIGRTGRAG G+AT+F T + ++ DL +L++SN VP
Sbjct: 382 NVKHVINFDLPTDIDEYVHRIGRTGRAGNIGLATSFFTDRNRNISRDLMDLLVESNQEVP 441
Query: 642 PELAKHEASKFKPGT-IPDRPP 662
L K ++ + DR P
Sbjct: 442 EWLEKMSRKSYRSASKYYDRTP 463
>gi|355704727|gb|EHH30652.1| ATP-dependent RNA helicase DDX3X [Macaca mulatta]
Length = 662
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ + D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIHRKVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|344292629|ref|XP_003418028.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 1 [Loxodonta
africana]
Length = 662
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEEPDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|398364809|ref|NP_014287.3| Dbp2p [Saccharomyces cerevisiae S288c]
gi|118284|sp|P24783.1|DBP2_YEAST RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD
box protein 2; AltName: Full=p68-like protein
gi|5272|emb|CAA36874.1| p68 protein [Saccharomyces cerevisiae]
gi|1302034|emb|CAA95991.1| DBP2 [Saccharomyces cerevisiae]
gi|285814541|tpg|DAA10435.1| TPA: Dbp2p [Saccharomyces cerevisiae S288c]
Length = 546
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 247/420 (58%), Gaps = 24/420 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR++ ++ G IP+P+ + E +L V+ G+ P+ IQ P+ L RD++
Sbjct: 95 FRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA TGSGKT ++ LP + +I+ P ++ +GP +V+APTRELA QI+ E KF H
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQPLLAP---GDGPIVLVLAPTRELAVQIQTECSKFGH 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I+ + GG +Q + +G E+VIATPGRLID LE L + Y+VLDEADR
Sbjct: 212 SSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D ++P+ R T M+SAT P V++LA YL
Sbjct: 272 MLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVKQLAADYLN 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNAD 528
+P+ V +G+ A+ I+Q V ++ + EK RL + L+ ++F +TK+ D
Sbjct: 315 DPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ K L + G+ +HG K Q +R+ L+ FR R ++VATDVA RGID+ + +VIN
Sbjct: 375 DITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
YDMPGNIE Y HRIGRTGRAG TG A +F T + + L ++ ++N +PPEL K++
Sbjct: 435 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYD 494
>gi|344292631|ref|XP_003418029.1| PREDICTED: ATP-dependent RNA helicase DDX3X isoform 2 [Loxodonta
africana]
Length = 646
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 148 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 207
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 208 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 267
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 268 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 327
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 328 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 372
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 373 IQMLARDFLEEYIFLAVGRVGSTSENITQKVVWVEEPDKRSFLLDLLNATGKDSLTLVFV 432
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 433 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 492
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 493 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 552
Query: 642 PEL 644
L
Sbjct: 553 SWL 555
>gi|444521450|gb|ELV13183.1| ATP-dependent RNA helicase DDX3X [Tupaia chinensis]
Length = 662
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 251/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++ + ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFNDVRMGEIIMGNIELTHYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTREL QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELVVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + + +G G +E I+Q VV ++ES+K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDDYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHRFRSGKCPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + + DL +LI++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNITITKDLLDLLIEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|160380611|sp|A6ZRX0.1|DBP2_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD
box protein 2; AltName: Full=p68-like protein
gi|151944424|gb|EDN62702.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190409099|gb|EDV12364.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|259149249|emb|CAY82491.1| Dbp2p [Saccharomyces cerevisiae EC1118]
gi|349580827|dbj|GAA25986.1| K7_Dbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 546
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 247/420 (58%), Gaps = 24/420 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR++ ++ G IP+P+ + E +L V+ G+ P+ IQ P+ L RD++
Sbjct: 95 FRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA TGSGKT ++ LP + +I+ P ++ +GP +V+APTRELA QI+ E KF H
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQPLLAP---GDGPIVLVLAPTRELAVQIQTECSKFGH 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I+ + GG +Q + +G E+VIATPGRLID LE L + Y+VLDEADR
Sbjct: 212 SSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D ++P+ R T M+SAT P V++LA YL
Sbjct: 272 MLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVKQLAADYLN 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKT---AIVFVNTKKNAD 528
+P+ V +G+ A+ I+Q V ++ + EK RL + L+ ++F +TK+ D
Sbjct: 315 DPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ K L + G+ +HG K Q +R+ L+ FR R ++VATDVA RGID+ + +VIN
Sbjct: 375 DITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
YDMPGNIE Y HRIGRTGRAG TG A +F T + + L ++ ++N +PPEL K++
Sbjct: 435 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYD 494
>gi|83952321|ref|ZP_00961053.1| ATP-dependent RNA helicase RhlE [Roseovarius nubinhibens ISM]
gi|83837327|gb|EAP76624.1| ATP-dependent RNA helicase RhlE [Roseovarius nubinhibens ISM]
Length = 552
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 232/399 (58%), Gaps = 32/399 (8%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
M ++E L ++L+A++ GY++P+PIQ AIP L+ RDV+GIA+TG+GKTA+F LPM
Sbjct: 1 MTKFSELNLNAKVLKAIDEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM 60
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
L+ ++R A P ++V+ PTRELA Q+ E ++ +L + ++GG S +E
Sbjct: 61 LSLLAR-----GRARARMPRSLVLCPTRELAAQVAENFDTYSKHLKLTKALLIGGVSFKE 115
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+IATPGRL+D ER +L+ +V+DEADRM+DMGF P + +
Sbjct: 116 QEQIIDKGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLT 175
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T FSATM P +ER+ +L NP V + A+E I
Sbjct: 176 P-----------------FTRQTLFFSATMAPEIERITNTFLSNPARVEVARQATASETI 218
Query: 490 SQHVVMMK-------ESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYR 540
Q VVM K SEK + L++L+D GDK AI+F N K + D+VAK+L K GY
Sbjct: 219 EQGVVMFKGSRRDREASEKRNVLRKLIDAEGDKCTNAIIFCNRKTDVDIVAKSLKKYGYD 278
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +LE FR LVA+DVA RG+D+P V+HV N+D+P + E Y H
Sbjct: 279 AAPIHGDLDQSQRTRTLESFRAGDLRFLVASDVAARGLDVPSVSHVFNFDVPSHAEDYVH 338
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
RIGRTGRAG+ G A + D F D + LIQ P
Sbjct: 339 RIGRTGRAGRDGKAMMICSARDEKNF-DAIEKLIQKEIP 376
>gi|260796379|ref|XP_002593182.1| hypothetical protein BRAFLDRAFT_209728 [Branchiostoma floridae]
gi|229278406|gb|EEN49193.1| hypothetical protein BRAFLDRAFT_209728 [Branchiostoma floridae]
Length = 614
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 245/424 (57%), Gaps = 29/424 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G P+ + + + L + ++ Y P+P+Q AIP+ RD++
Sbjct: 122 EDIPVEATGESCPQHISEFTDLDLGEIISNNIKLSNYMKPTPVQKYAIPIARANRDLMAC 181
Query: 295 AETGSGKTAAFVLPMLTYISR-----LPPISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF++P+L+ I LP + G P A+V+APTRELA QI
Sbjct: 182 AQTGSGKTAAFLIPILSLIYENGPQGLPQHGRQYGGSGSRKRYPLALVLAPTRELASQIY 241
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E+ KFA+ ++ + GG I Q + +GC +++ TPGRL+D +ER L+ Y
Sbjct: 242 DESKKFAYRSHVRPCVVYGGADIGGQMRDLERGCHLLVGTPGRLVDMMERGRIGLDYIKY 301
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
++LDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 302 LILDEADRMLDMGFEPQIRRIVEQDTMPGTG---------------KRRTMMFSATFPKE 346
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG--DKTAIVF 520
++ LAR +L N + + +G G ++ I+Q VV + E +K S L LL+ G D + F
Sbjct: 347 IQMLARDFLDNYIFLAVGRVGSTSDNITQKVVWVDEQDKRSFLLDLLNATGKEDSLTLTF 406
Query: 521 VNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDI 580
V TKK AD + L GY V+++HG +SQ +RE +L FRT +LVAT VA RG+DI
Sbjct: 407 VETKKGADSLEAFLYSEGYPVSSIHGDRSQREREDALMTFRTGVTPILVATAVAARGLDI 466
Query: 581 PDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPV 640
P+V HVIN+D+P +I+ Y HRIGRTGR G G+AT+F + +V DL +LI+S +
Sbjct: 467 PNVKHVINFDLPSDIDEYVHRIGRTGRVGNLGLATSFFNDKNRNVVRDLVDILIESKQEL 526
Query: 641 PPEL 644
PP L
Sbjct: 527 PPWL 530
>gi|227524|prf||1705300A ATP dependent RNA helicase
Length = 604
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 248/430 (57%), Gaps = 24/430 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G +P P+ + L LL ++ + P+P+Q ++P+ RD+
Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLKAC 185
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--------PYAVVMAPTRELAQQIEEE 346
A+TGSGKT F+ P+L+ + P S + E++G P AV+MAPTRELA QI +E
Sbjct: 186 AQTGSGKTGGFLFPVLSESFKTGP-SPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDE 244
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF + +K + GG I Q I +GC++++ATPGRL D LER L Y+V
Sbjct: 245 AKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLV 304
Query: 407 LDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERL 466
LDEADRM+DMGFEPQ+ +++ ++ P E R T MFSAT P ++ L
Sbjct: 305 LDEADRMLDMGFEPQIRHIVE---DCDMTPVGE----------RQTLMFSATFPADIQHL 351
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKN 526
AR +L + + +++G G +E I+Q V+ ++ +K S L LL D ++FV TK+
Sbjct: 352 ARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRM 411
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L +R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HV
Sbjct: 412 ADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHV 471
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
INYD+P +++ Y HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L
Sbjct: 472 INYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL-- 529
Query: 647 HEASKFKPGT 656
+A PG+
Sbjct: 530 KDAMMSAPGS 539
>gi|449267073|gb|EMC78039.1| putative ATP-dependent RNA helicase DDX41, partial [Columba livia]
Length = 605
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 175/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 111 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTAPRYILAMSEARHDRVRKKYHILVEGE 168
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G + P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 169 GIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 228
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 229 FTLPVIMFCMEQEKRLP----FSKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDGLP 284
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ I+ G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 285 PLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 344
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 345 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 387
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
+ + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 388 ITINVGRAGAASLDVVQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 446
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 447 LLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 506
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 507 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 557
>gi|346992915|ref|ZP_08860987.1| ATP-dependent RNA helicase RhlE [Ruegeria sp. TW15]
Length = 455
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/399 (41%), Positives = 230/399 (57%), Gaps = 32/399 (8%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
M + E L P++L+A+E GY+ P+PIQ AIP L+ RDV+GIA+TG+GKTA+F LPM
Sbjct: 6 MTKFNELNLNPKVLKAIEEAGYETPTPIQEGAIPAALEGRDVLGIAQTGTGKTASFTLPM 65
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+T ++R A P ++V+ PTRELA Q+ E +A +L + ++GG S +E
Sbjct: 66 ITLLAR-----GRARARMPRSLVLCPTRELAAQVAENFDTYAKHLKLTKALLIGGVSFKE 120
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+IATPGRL+D ER +L +V+DEADRM+DMGF P + +
Sbjct: 121 QDALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLT 180
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T FSATM P +ER+ +L P V + A+E I
Sbjct: 181 P-----------------FTRQTLFFSATMAPEIERITDTFLSAPTRVEVARQATASETI 223
Query: 490 SQHVVMMK-------ESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYR 540
Q VVM K S+K L+ L+D G+K AI+F N K + D+ AK+L K GY
Sbjct: 224 EQGVVMFKGGRRDREASQKRKTLRALIDSEGEKCTNAIIFCNRKTDVDICAKSLKKYGYN 283
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +L+GFR +LVA+DVA RG+DIP V+HV N+D+PG+ E Y H
Sbjct: 284 AAAIHGDLDQSQRMKTLDGFRDGSLRLLVASDVAARGLDIPSVSHVFNFDVPGHAEDYVH 343
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
RIGRTGRAG+ G A T + D ++ LIQ + P
Sbjct: 344 RIGRTGRAGREGKAITICSGRDEKALAAIES-LIQKDIP 381
>gi|344240368|gb|EGV96471.1| putative ATP-dependent RNA helicase DDX41 [Cricetulus griseus]
Length = 622
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLNMSEERHERVRKRYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>gi|310756762|gb|ADP20522.1| ATP-dependent RNA helicase DDX3X [Heterocephalus glaber]
Length = 662
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV +++ +K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDIDKRSFLLDLLNATGKDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L + GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYREGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDRNANITKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|345566862|gb|EGX49802.1| hypothetical protein AOL_s00076g686 [Arthrobotrys oligospora ATCC
24927]
Length = 1086
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/420 (40%), Positives = 245/420 (58%), Gaps = 27/420 (6%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I +G+ P+P++ W+ L L + ++ Y+ P+ IQ AIP + R+VIG+A+T
Sbjct: 434 GIKVRGANCPKPVQKWSLLGLPSATLDVINKLEYEKPTSIQAQAIPAIMSGRNVIGVAKT 493
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPM +I P+ EN EGP A+VM PTRELA QI +E+ F L ++
Sbjct: 494 GSGKTMAFLLPMFRHIKDQRPL--EN-LEGPIALVMTPTRELATQIFKESKPFLKALNLR 550
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
V GG I++Q +++G E ++ TPGR+ID L R L + YVVLDEADRM
Sbjct: 551 GVCAYGGSPIKDQIAELKRGAEFIVCTPGRMIDLLAANSGRVTNLKRVTYVVLDEADRMF 610
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ ++ N++P+ R T +FSAT P +E LARK L P
Sbjct: 611 DMGFEPQVMRII-----GNIRPD------------RQTVLFSATFPSQMEALARKVLIKP 653
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT----AIVFVNTKKNADMV 530
V + +G +SQ V + E+ KF+RL +L EL DK ++VFV+ +++AD +
Sbjct: 654 VEIVVGARSVVAAEVSQIVEVRTETTKFARLLEILGELYDKEDDARSLVFVDRQESADSL 713
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+L K GY +LHGGK Q R+ ++ F+ VLVAT VA RG+D+ + V+NYD
Sbjct: 714 LSDLMKRGYATMSLHGGKDQIDRDSTISDFKAGVSQVLVATSVAARGLDVKQLKLVVNYD 773
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEAS 650
P ++E Y HR+GRTGRAG G A TF+T +D+ + L S VP E+ K +S
Sbjct: 774 CPNHMEDYVHRVGRTGRAGNKGTAVTFITPDQERYAHDIAKALKLSGQDVPEEVQKLVSS 833
>gi|336383448|gb|EGO24597.1| hypothetical protein SERLADRAFT_449372 [Serpula lacrymans var.
lacrymans S7.9]
Length = 487
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 256/429 (59%), Gaps = 23/429 (5%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
+K++ +ERD FR I +G +PRP+ ++ E ++ ++ G+ +P+PIQ
Sbjct: 29 DKRVSSRSERDIDEFRRSKEIKVQGRGVPRPVSSFDEAGFPEYIMSSILAQGFSSPTPIQ 88
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
A P+ L RDV+ IA+TGSGKT +F LP + +I+ P ++ +GP A+V+APTRE
Sbjct: 89 CQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAP---GDGPIALVLAPTRE 145
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAV 398
LA QI++E KF I+ +I GG Q +++G EVVIATPGRLID LE +
Sbjct: 146 LAVQIQQECTKFGSSSRIRNTAIYGGAPKGPQIRDLQRGVEVVIATPGRLIDMLETQKTN 205
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
L + Y+V+DEADRM+DMGFEPQ+ ++ S ++P+ R T MFSAT
Sbjct: 206 LRRITYLVMDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLMFSAT 248
Query: 459 MPPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTA 517
P V++LA +L++ + V IG+ A I Q V + + EK ++L + LD++ + A
Sbjct: 249 WPKDVQKLANDFLKDMIQVNIGSMELTANHNIQQIVEVCSDFEKRAKLIKHLDQISAENA 308
Query: 518 --IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
++FV TK+ AD + K L + G+ +HG K Q +R+ L F+ R +L+ATDVA
Sbjct: 309 KVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPILIATDVAS 368
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ DV +VINYD P N E Y HRIGRTGRAG G + T+ T + +L +L +
Sbjct: 369 RGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSARELIGILRE 428
Query: 636 SNSPVPPEL 644
+ + VPP+L
Sbjct: 429 AKANVPPQL 437
>gi|302665308|ref|XP_003024266.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
gi|291188313|gb|EFE43655.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
Length = 1171
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 241/417 (57%), Gaps = 29/417 (6%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I +G +P P++ W++ L + L + ++GY+ P+ IQ A+P + RDVIG+A+TG
Sbjct: 526 IKVRGVDVPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTG 585
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT AF+LPM +I P+ EN EGP +++M PTRELA QI E F L ++
Sbjct: 586 SGKTIAFLLPMFRHIRDQRPL--EN-MEGPISLIMTPTRELATQIHRECRPFLKALNLRA 642
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMID 415
V GG I++Q +++G E+++ TPGR+ID L R L + YVVLDEADRM D
Sbjct: 643 VCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFD 702
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
MGFEPQV+ +L N++P R T +FSAT P +E LARK L P+
Sbjct: 703 MGFEPQVMKIL-----GNIRPN------------RQTVLFSATFPRNMEALARKTLSKPI 745
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DELGDKTAIVFVNTKKNADM 529
+ +G I+Q V + + KF RL LL DE D +VFV+ ++ AD
Sbjct: 746 EIIVGGRSVVAPEITQIVEVRNDDAKFVRLLELLGNLYSDDENEDARTLVFVDRQEAADR 805
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+ ++L + GY ++HGGK Q R+ +++ F+ + +LVAT VA RG+D+ + V+NY
Sbjct: 806 LLRDLMRKGYPCMSIHGGKDQIDRDSTIDDFKAGIFPILVATSVAARGLDVKQLKLVVNY 865
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
D P ++E Y HR GRTGRAG TG A TFLT D+ + L QS PVP + K
Sbjct: 866 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDISKALKQSGQPVPEPIQK 922
>gi|14042692|dbj|BAB55355.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 261/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E RE ++I +G
Sbjct: 117 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLSMSEERHERVREKYHILVEGD 174
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 175 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 234
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 235 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 351 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 393
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 394 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 452
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 453 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 512
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK + +++ VPP L
Sbjct: 513 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALQLEAKQKVPPVL 563
>gi|358372963|dbj|GAA89564.1| pre-mRNA-processing ATP-dependent RNA helicase Prp5 [Aspergillus
kawachii IFO 4308]
Length = 1178
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 250/430 (58%), Gaps = 30/430 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
L +M++ + R + + I +G +P+P++ W++ L + L ++++GY+ + IQ
Sbjct: 515 LAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQ 574
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RDVIG+A+TGSGKT AF++PM +I P+ + EGP ++M PTRELA
Sbjct: 575 AIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPL---DNMEGPVGLIMTPTRELA 631
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYA 397
QI ++ F L ++ V GG I++Q +++G E+++ TPGR+ID L R
Sbjct: 632 TQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVT 691
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + YVVLDEADRM DMGFEPQV+ ++ +N++P+ R T +FSA
Sbjct: 692 NLRRVTYVVLDEADRMFDMGFEPQVMKIM-----ANIRPD------------RQTVLFSA 734
Query: 458 TMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL------DE 511
T P +E LARK L P+ + +G I+Q V + + +KF RL LL DE
Sbjct: 735 TFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKFVRLLELLGNLYSSDE 794
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
D A++FV+ ++ AD + + L + GY ++HGGK Q R+ ++E F+ + VL+AT
Sbjct: 795 NEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT 854
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQ 631
VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TFLT D+ +
Sbjct: 855 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAK 914
Query: 632 MLIQSNSPVP 641
L QS VP
Sbjct: 915 ALKQSGQKVP 924
>gi|354465160|ref|XP_003495048.1| PREDICTED: putative ATP-dependent RNA helicase Pl10-like
[Cricetulus griseus]
Length = 524
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 253/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 25 DDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 84
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 85 AQTGSGKTAAFLLPILSQIYTDGPGEALRAVKENGKYGRRKQYPISLVLAPTRELAVQIY 144
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 145 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 204
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 205 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 249
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 250 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFV 309
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 310 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 369
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 370 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 429
Query: 642 PEL 644
L
Sbjct: 430 SWL 432
>gi|159489124|ref|XP_001702547.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280569|gb|EDP06326.1| predicted protein [Chlamydomonas reinhardtii]
Length = 600
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 171/452 (37%), Positives = 260/452 (57%), Gaps = 27/452 (5%)
Query: 211 MRVDRHWSEKK------LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
+R R W+EK E T ++ + ED + G +P P+ ++ + +L ++
Sbjct: 99 VRRSRAWAEKAEIDALYGAENTGINFEAY-EDIPVETSGKDVPPPVHSFEDLQLPACMME 157
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI---SRLPPISE 321
++R + P+P+Q +I +GL RD++ A+TGSGKTAAF P++ + P
Sbjct: 158 NIKRCKFTKPTPVQKHSITIGLAGRDLMACAQTGSGKTAAFCFPIIASMLMKGYQPAAGR 217
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+ P A+V+APTREL QI +E KF + G++ V I GG Q + +GC+++
Sbjct: 218 NSRKALPGALVLAPTRELTSQIYDEARKFTYMTGLRPVVIYGGAPAPNQLRDLERGCDIL 277
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
+ATPGRL D +ER L+ ++ LDEADRM+DMGFEPQ+ +++ ++ P
Sbjct: 278 VATPGRLSDFIERGRVGLSSIVFLCLDEADRMLDMGFEPQIRRIVE---QEDMPPVG--- 331
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
+R T MFSAT P ++RLA +L N V +T+G G +T+LI QH+ + EK
Sbjct: 332 -------HRQTLMFSATFPKEIQRLASDFLANYVFLTVGRVGSSTDLIVQHIEYVTPEEK 384
Query: 502 FSRLQRLLDELG----DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
+ L L+ + +VFV TK+ AD + + L + T++HG +SQEQRE++L
Sbjct: 385 QNTLLDLISTVEVSRRQGLTLVFVETKRGADELERILTRNQLPATSIHGDRSQEQREMAL 444
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
F++ + V+VATDVA RG+DIP V HVINYD+P +I+ Y HRIGRTGRAG G+AT F
Sbjct: 445 RSFKSGKTPVMVATDVAARGLDIPHVTHVINYDLPKDIDDYVHRIGRTGRAGHKGLATAF 504
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
T D + L ++L ++N VP L + A
Sbjct: 505 FTDSDAPLARSLVEVLTETNQTVPGWLQNYAA 536
>gi|354471937|ref|XP_003498197.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Cricetulus
griseus]
Length = 638
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 133 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLNMSEERHERVRKRYHILVEGD 190
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 191 GIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 250
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 251 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 306
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 307 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 366
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 367 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 409
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 410 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 468
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 469 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 528
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 529 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 579
>gi|291240646|ref|XP_002740231.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked-like
[Saccoglossus kowalevskii]
Length = 694
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 248/418 (59%), Gaps = 23/418 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G IP P+ +++ L + ++ Y P+P+Q A+P+ +RD++
Sbjct: 214 EDIPVEATGESIPEPVSEFSDIDLGEIIQSNIKNSTYARPTPVQKYALPIIRLKRDLMAC 273
Query: 295 AETGSGKTAAFVLPMLTYI-----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVK 349
A+TGSGKTAAF+LP+L+ I ++P P +V+APTRELA QI +E K
Sbjct: 274 AQTGSGKTAAFLLPILSQIYENGPGKIPESRYARRKHFPLGLVLAPTRELASQIYDEARK 333
Query: 350 FAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDE 409
F++ ++ + GG + Q + +GC +++ATPGRL+D +ER L+Q +VVLDE
Sbjct: 334 FSYRSHVRPCVVYGGADVGGQMRELDRGCHLLVATPGRLVDMMERGKIGLDQIKWVVLDE 393
Query: 410 ADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLA 467
ADRM+DMGFEPQ+ ++ D MP K R MFSAT P ++ LA
Sbjct: 394 ADRMLDMGFEPQIRRIVEQDTMP---------------KTGERQMLMFSATFPKEIQILA 438
Query: 468 RKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKN 526
R +L N + + +G G + I+Q VV + E++K S L LL G D +VFV TKK
Sbjct: 439 RDFLDNYIFLAVGRVGSTSVNITQKVVWVDENDKRSFLLDLLSATGSDSLTLVFVETKKG 498
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L + G+R T++HG +SQ +RE +L FRT + +LVAT VA RG+DIP+V HV
Sbjct: 499 ADSLEDFLYRDGHRATSIHGDRSQREREEALRSFRTGQTPILVATAVAARGLDIPNVKHV 558
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
IN+DMP +IE Y HRIGRTGR G G+AT+F + +V DL ++++++ VP L
Sbjct: 559 INFDMPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNRNVVRDLLELIMETKQEVPSWL 616
>gi|412988365|emb|CCO17701.1| predicted protein [Bathycoccus prasinos]
Length = 497
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 244/419 (58%), Gaps = 25/419 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G+ P+P+ + + E+ +ER +K P+P+Q AIP+ L RD++
Sbjct: 32 EDIPVEVSGNDPPKPIEFFKDVDFGKEINANIERCKFKKPTPVQRYAIPISLAGRDLMAC 91
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG----PYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P++ I ++ G P A+V++PTRELA QI EE KF
Sbjct: 92 AQTGSGKTAAFCFPIICGILNRGLLTGGGGQRGRKTLPLALVLSPTRELAIQIHEEARKF 151
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
A+ G + V + GG EQ + +GC+++IATPGRLID ++R L +C Y+ LDEA
Sbjct: 152 AYKTGCRAVVVYGGAPAAEQFREMERGCDILIATPGRLIDLIDRAKVGLAKCEYLALDEA 211
Query: 411 DRMIDMGFEPQVVGVLDA--MPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLAR 468
DRM+DMGFEPQ+ +++ MP + R T +FSAT P ++R+A
Sbjct: 212 DRMLDMGFEPQIRQLVEQRDMPRTG---------------ERQTMLFSATFPKEIQRMAS 256
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD--ELGDKTAIVFVNTKKN 526
+L + V +T+G G +TELI+Q V + + + Q LLD E +VFV TK+
Sbjct: 257 DFLHDYVFLTVGRVGSSTELINQTVCYVPS--YYDKTQMLLDLTEAVPGLTLVFVETKRG 314
Query: 527 ADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHV 586
AD + L + G T++HG ++Q++RE +L+ FR R +LVATDVA RG+DIP V HV
Sbjct: 315 ADQLEDFLCEQGKPATSIHGDRTQQEREAALKSFRAGRTPILVATDVAARGLDIPHVTHV 374
Query: 587 INYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
+N+D+P +I+ Y HRIGRTGRAGK G AT D + L ++ ++ VP L
Sbjct: 375 VNFDLPTDIDDYVHRIGRTGRAGKKGQATALFGDKDAGIARALMDVMSEAGQEVPSFLG 433
>gi|384950052|gb|AFI38631.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
Length = 661
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 249/423 (58%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 163 DDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV +++ +K S L LL G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDLLGATGRDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|384081008|dbj|BAM10949.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, partial
[Tokudaia muenninki]
Length = 559
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 257/442 (58%), Gaps = 28/442 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + N+++ ++ ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 65 DDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 124
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 125 AQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIY 184
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 185 EEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 244
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 245 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 289
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E +K S L LL+ G D +VFV
Sbjct: 290 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFV 349
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L + Y T++HG +SQ+ RE +L FR+ R +LVAT VA RG+DI
Sbjct: 350 ETKKGADSLENFLFQERYSCTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDIS 409
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 410 NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVP 469
Query: 642 PELAKHEASKFKPGTIPDRPPR 663
L G+ RP R
Sbjct: 470 SWLESMAYEHHYKGSSRGRPKR 491
>gi|402591636|gb|EJW85565.1| DEAD box RNA helicase [Wuchereria bancrofti]
Length = 952
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/401 (40%), Positives = 244/401 (60%), Gaps = 24/401 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
L ++T+++ +RE+ +I +G P+P+R+WA+ + ++L ++++ YK P+PIQ A
Sbjct: 263 LAKITKKEVDEYREELDIRVRGKNCPKPIRSWAQCGVEWKILSTLKKLEYKKPTPIQCQA 322
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IP + RDVIGIA+TGSGKT AF+LPM +I P E E +GP AV+M+PTRELA
Sbjct: 323 IPAIISGRDVIGIAKTGSGKTLAFLLPMFRHILDQP---ELEEMDGPIAVIMSPTRELAM 379
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAV 398
Q +E KFA L ++V + GG I +Q +++G EVV+ T GRL D L + +
Sbjct: 380 QTWKEANKFAKQLDVRVACVYGGVGISDQIGDLKRGAEVVVCTVGRLTDMLAANKGKVTN 439
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
L + Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSAT
Sbjct: 440 LRRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD------------RQTVLFSAT 482
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TA 517
P +E LARK L P+ + +G + ++Q+VV+++E +K +L LL +
Sbjct: 483 FPRQMEALARKILDKPIEIMVGGKSVVCDDVNQNVVILEEHQKMLKLLELLGVYWENGNV 542
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VFV+ ++ AD + L + GY LHGG Q R+ ++ ++ + +LVAT VA RG
Sbjct: 543 LVFVDKQEKADDLVAQLMRSGYNCAPLHGGIDQFDRDSTILDYKAGKIKLLVATSVAARG 602
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFL 618
+DI + V+NYD P + E Y HR+GRTGRAG G A TF+
Sbjct: 603 LDIKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYTFI 643
>gi|427794777|gb|JAA62840.1| Putative dead-box protein abstrakt, partial [Rhipicephalus
pulchellus]
Length = 740
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 251/432 (58%), Gaps = 35/432 (8%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G P+ + ++ + LT + +E Y +P+P+Q AIP+ L +RD++
Sbjct: 217 EDIPVEATGDDAPKHISSFDDCSLTEIIRMNIELAHYTSPTPVQKHAIPIILSKRDLMAC 276
Query: 295 AETGSGKTAAFVLPMLTYI-SRLPPIS-------EENEAEGPYAVVMAPTRELAQQIEEE 346
A+TGSGKTAAF++P+L + PP + + P A++++PTRELA QI EE
Sbjct: 277 AQTGSGKTAAFLVPILNQVFEEGPPKNVPAPHRYSSRPKQYPLALILSPTRELACQIYEE 336
Query: 347 TVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KFA+ ++ + GG +Q + +GC +++ATPGRL+D +ER L Y+V
Sbjct: 337 ACKFAYRSRVRPCVVYGGADPVQQMKDLDRGCHLLVATPGRLVDMMERGKVSLELVRYLV 396
Query: 407 LDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
LDEADRM+DMGFEPQ+ ++ D MP R T MFSAT P V+
Sbjct: 397 LDEADRMLDMGFEPQIRRIVLEDNMPPVG---------------QRQTLMFSATFPKKVQ 441
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG----------D 514
LARK+L N + + +G G +E I+Q VV ++E +K S L LL+ G D
Sbjct: 442 ELARKFLDNYIFLAVGRVGSTSENITQKVVWVEEHDKRSFLLDLLNAAGLRNGGHASASD 501
Query: 515 KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
+ FV TKK AD + L K GY VT++HG ++Q +RE +L FRT R +LVAT VA
Sbjct: 502 SLTLSFVETKKGADALEHFLLKEGYPVTSIHGDRTQREREEALWSFRTGRTPILVATAVA 561
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLI 634
RG+DIP+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +++
Sbjct: 562 ARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNRNMALDLVELIT 621
Query: 635 QSNSPVPPELAK 646
++ +P LA
Sbjct: 622 ETKQELPDWLAS 633
>gi|343427053|emb|CBQ70581.1| related to RNA helicase [Sporisorium reilianum SRZ2]
Length = 1155
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/441 (39%), Positives = 251/441 (56%), Gaps = 30/441 (6%)
Query: 222 LEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMA 280
+++M+E R + + I+ +G P+P+ W+ L L ++R+GY P+PIQ
Sbjct: 449 IQDMSEELANQIRLEMDAITVRGKDCPKPLTKWSHCGLPASCLDVIKRLGYAAPTPIQSQ 508
Query: 281 AIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELA 340
AIP + RD+IG+A+TGSGKT AF+LPM +I P+ EGP +VM PTRELA
Sbjct: 509 AIPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPV---EVGEGPVGIVMTPTRELA 565
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYA 397
QI E F LG++ + GG I EQ +++ ++V+ATPGRLID L R
Sbjct: 566 VQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVT 625
Query: 398 VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSA 457
L + Y+VLDEADRM DMGFEPQV+ +++ N++P+ R T +FSA
Sbjct: 626 NLRRVTYLVLDEADRMFDMGFEPQVMKIVN-----NIRPD------------RQTVLFSA 668
Query: 458 TMPPAVERLARKYLRN-PVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL---- 512
T P +E LARK L+N P+ +T+G I Q V + E+ KF RL +L EL
Sbjct: 669 TFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRPENTKFHRLLEILGELYNRE 728
Query: 513 GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATD 572
D ++FV+ ++ AD + K+L + GY +LHGGK Q R+ ++ F+ ++ AT
Sbjct: 729 KDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTATS 788
Query: 573 VAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQM 632
VA RG+D+ + VINYD+P ++E Y HR GRTGRAG+ G TF+T D+
Sbjct: 789 VAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFVTPEQDRYARDIIAA 848
Query: 633 LIQSNSPVPPELAKHEASKFK 653
L S + VP EL + A+ FK
Sbjct: 849 LKASAAHVPAEL-ETMAAAFK 868
>gi|331217131|ref|XP_003321244.1| hypothetical protein PGTG_02286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300234|gb|EFP76825.1| hypothetical protein PGTG_02286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 547
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 259/430 (60%), Gaps = 23/430 (5%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
+ ++ +ERD FR + I G IP+P+ N++E ++ + G+ PSPIQ
Sbjct: 81 DPRITSRSERDINQFRAEKEIQVFGKNIPKPISNFSEAGFPDYIMSEIRNAGFNAPSPIQ 140
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
A P+ L RDV+ ++ TGSGKT AF +P + +I+ P ++ +GP +++APTRE
Sbjct: 141 CQAWPMALSGRDVVAVSATGSGKTIAFSIPAMIHINAQPLLAP---GDGPIVLILAPTRE 197
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAV 398
LA QI+ E KF I+ + GG +Q + +G E+VIATPGRLID LE R
Sbjct: 198 LAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLTRGAEIVIATPGRLIDMLESRKTN 257
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
L++ Y+V+DEADRM+DMGFEPQ+ +++ ++P+ R T MFSAT
Sbjct: 258 LHRVTYLVMDEADRMLDMGFEPQIKKIVE-----QIRPD------------RQTLMFSAT 300
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATEL-ISQHVVMMKESEKFSRLQRLLDELGDKTA 517
P V+RLA +YL++ + V +G+ + I+Q V + + EK +L + L+++ ++A
Sbjct: 301 WPKEVQRLASEYLKDFIQVNVGSLDLTANINITQIVEVCSDFEKRGKLIKHLEKISSESA 360
Query: 518 --IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
++FV TK+ AD + K L + G+ +HG K Q++R+ LE F++ R +++ATDVA
Sbjct: 361 KVLIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQERDWVLEEFKSGRSPIMIATDVAS 420
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+A+VINYDMP IE Y HRIGRTGRAG+TG A ++++ + + +L ++L
Sbjct: 421 RGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISADQSKLAKELVKILRD 480
Query: 636 SNSPVPPELA 645
+ VP L
Sbjct: 481 AKQIVPSALV 490
>gi|224551506|gb|ACN54195.1| Ddx3y [Bos taurus]
Length = 635
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +E+ G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ + + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIIEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGTDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+PG+IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|17510307|ref|NP_491112.1| Protein VBH-1, isoform b [Caenorhabditis elegans]
gi|373220253|emb|CCD72827.1| Protein VBH-1, isoform b [Caenorhabditis elegans]
Length = 644
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 258/440 (58%), Gaps = 27/440 (6%)
Query: 217 WSEKKLEEMTERDWRIFR-EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
+SE L T+ + E+ + G +P + ++ E P ++ V R GY P+
Sbjct: 88 YSESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPT 147
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI-------SRLPPISEENEAEGP 328
P+Q +IP L RD++ A+TGSGKTAAF+LP++ +I + P + P
Sbjct: 148 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYP 207
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG-QSIEEQGFRIRQGCEVVIATPGR 387
A+V++PTRELA QI +E KF++ I+ + GG ++ +Q R+R G ++IATPGR
Sbjct: 208 CALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGR 267
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD-AMPSSNLKPENEDEELDEK 446
LID +E+ + L C Y+VLDEADRM+DMGFEPQ+ ++ MP
Sbjct: 268 LIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMP---------------P 312
Query: 447 RIYRTTYMFSATMPPAVERLARKYLR-NPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
+ RTT MFSAT P ++ LA+ +L+ N + + +G G +E I Q ++ + E EK S L
Sbjct: 313 KTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNL 372
Query: 506 QR-LLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L++E + +VFV TK+ A+ +A L++ R ++HG Q +RE +LE FR+ +
Sbjct: 373 MEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQ 432
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+LVAT VA RG+DIP+V HVINYD+PG+ + Y HRIGRTGR G G+AT+F +
Sbjct: 433 CPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRG 492
Query: 625 VFYDLKQMLIQSNSPVPPEL 644
+ DLK ++++SN VP L
Sbjct: 493 IGRDLKNLIVESNQEVPEWL 512
>gi|289342912|ref|NP_001166066.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Bos taurus]
gi|284794217|gb|ADB93367.1| DEAD box polypeptide 3 Y-linked short isoform [Bos taurus]
gi|296470425|tpg|DAA12540.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Bos
taurus]
Length = 660
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +E+ G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ + + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIIEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGTDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+PG+IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|284794215|gb|ADB93366.1| DEAD box polypeptide 3 Y-linked long isoform [Bos taurus]
Length = 661
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 252/423 (59%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ P + ++++ + ++ +E Y P+P+Q AIP+ ++RD++
Sbjct: 164 DDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMAC 223
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +E+ G P ++V+APTRELA QI
Sbjct: 224 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIY 283
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ + + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 284 EEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 343
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 344 LVLDEADRMLDMGFEPQIRRIIEQDTMPPKGV---------------RHTMMFSATFPKE 388
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV ++E++K S L LL+ G D +VFV
Sbjct: 389 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGTDSLTLVFV 448
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 449 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 508
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+PG+IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 509 NVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLLVEAKQEVP 568
Query: 642 PEL 644
L
Sbjct: 569 SWL 571
>gi|328781103|ref|XP_394925.4| PREDICTED: probable ATP-dependent RNA helicase DDX43-like [Apis
mellifera]
Length = 626
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 174/418 (41%), Positives = 250/418 (59%), Gaps = 31/418 (7%)
Query: 245 KIPRPMRNWAEG-KLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTA 303
KIP P+ + + ++ PE+L + + + PSPIQ A P+ L RD+IGIA+TG+GKT
Sbjct: 207 KIPNPIETFEQAFEIYPEILDEIRKQKFVKPSPIQSQAWPILLSGRDLIGIAQTGTGKTL 266
Query: 304 AFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSI 361
AF+LP L +I ++P + E +GP ++MAPTRELA QIE+E K++ Y GIK V +
Sbjct: 267 AFLLPALIHIEGQQIPRV----ERKGPNVLIMAPTRELALQIEKEVNKYS-YHGIKAVCL 321
Query: 362 VGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
GG S ++Q + +G E+VIATPGRL D +E + ++ Y+VLDEADRM+DMGFEPQ
Sbjct: 322 YGGGSRKKQVNVVTEGVEIVIATPGRLNDLVEAKILNISSITYLVLDEADRMLDMGFEPQ 381
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGT 481
+ L +++P+ R T M SAT P V RLA+ Y++NP+ V +G+
Sbjct: 382 IRKTL-----LDIRPD------------RQTVMTSATWPQGVRRLAQSYMKNPIQVFVGS 424
Query: 482 AGKAT-ELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGY 539
AT + Q V ++ E EK + ++ + I+F K D VA +L
Sbjct: 425 LDLATVHTVMQKVYIVDEEEKTDMMYEFFRKMSPNDKVIIFFGKKTKVDDVASDLALQSV 484
Query: 540 RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 599
++HGG+ Q RE +LE +T +L+ATDVA RGIDI D+ HV+NYD P +IE Y
Sbjct: 485 NCQSIHGGREQSDREQALEDLKTGEVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYV 544
Query: 600 HRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA----KHEASKFK 653
HR+GRTGRAG++G + TF+T D DL +L ++N VP EL +H+A K K
Sbjct: 545 HRVGRTGRAGRSGESITFMTRKDWTHAKDLINILEEANQEVPEELYQMAERHKAWKGK 602
>gi|432879043|ref|XP_004073424.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Oryzias
latipes]
Length = 614
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 258/471 (54%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHW-SEKKLEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + +D + W + + + M E R+ F+I G
Sbjct: 109 LESVAEGRALMSVKEMAKGI--IYDDPIKTSWKAPRYILNMPETRHERVRKKFHILVDGD 166
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K P +L+ +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 167 GIPAPIKSFREMKFPPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLV 226
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQ---IEEETVKFAHYLG-- 355
F LP++ + RLP E GPY +++ P+RELA+Q I E K G
Sbjct: 227 FTLPIIMFALEQEKRLPFFKRE----GPYGLIICPSRELARQTHSIIEYYCKLLEEEGAP 282
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ ++ G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 283 QLRTALCIGGMSVKEQMEVVKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 342
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + R T +FSATMP ++ A+ L P
Sbjct: 343 DMGFEEDIRTIFSYFKGQ-----------------RQTLLFSATMPKKIQNFAKSALVKP 385
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 386 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 444
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E F+ + +VLVATDVA +G+D P + HV+NYDMP
Sbjct: 445 LLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEE 504
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+GKTG+ATTF+ D V DLK +LI++ VPP L
Sbjct: 505 IENYVHRIGRTGRSGKTGIATTFINKACDESVLMDLKALLIEAKQKVPPVL 555
>gi|348524092|ref|XP_003449557.1| PREDICTED: putative ATP-dependent RNA helicase an3-like isoform 2
[Oreochromis niloticus]
Length = 687
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 253/427 (59%), Gaps = 32/427 (7%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + ++ + + ++ + Y P+P+Q AIP+ +RD++
Sbjct: 188 DDIPVEATGSSCPPHIESFHDVDMGEIIMGNINLSRYTRPTPVQKYAIPIIKSKRDLMAC 247
Query: 295 AETGSGKTAAFVLPMLTYISRLPP---------ISEENEAEG-----PYAVVMAPTRELA 340
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA
Sbjct: 248 AQTGSGKTAAFLLPVLSQIYTEGPGDALQAAKNSGQENGRYGRRKQYPISLVLAPTRELA 307
Query: 341 QQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 400
QI +E KFA+ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+
Sbjct: 308 LQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 367
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
C+Y+V+DEADRM+DMGFEPQ+ ++ D MP + R T MFSAT
Sbjct: 368 YCHYLVVDEADRMLDMGFEPQIRRIVEQDTMPPKGI---------------RRTMMFSAT 412
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTA 517
P ++ LAR +L + + + +G G +E I+Q VV ++E++K S L LL+ G D
Sbjct: 413 FPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEETDKRSFLLDLLNATGKDSLT 472
Query: 518 IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRG 577
+VFV TKK AD + L + GY T++HG +SQ RE +L FR+ R +LVAT VA RG
Sbjct: 473 LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG 532
Query: 578 IDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
+DI +V HVIN+D+P +IE Y HRIGRTGR G G+AT+F ++++ DL +L+++
Sbjct: 533 LDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNSNITKDLLDILVEAK 592
Query: 638 SPVPPEL 644
VP L
Sbjct: 593 QEVPSWL 599
>gi|444318435|ref|XP_004179875.1| hypothetical protein TBLA_0C05580 [Tetrapisispora blattae CBS 6284]
gi|387512916|emb|CCH60356.1| hypothetical protein TBLA_0C05580 [Tetrapisispora blattae CBS 6284]
Length = 540
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 250/420 (59%), Gaps = 24/420 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
FR++ ++ G IP+P+ N+ E +L V+ G+ NP+ IQ P+ L RD++
Sbjct: 95 FRKENEMTISGHDIPKPITNFDEAGFPDYVLNEVKAEGFANPTAIQCQGWPMALSGRDMV 154
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
GIA TGSGKT ++ LP + +I+ P ++ +GP +V++PTRELA QI++E KF
Sbjct: 155 GIAATGSGKTLSYCLPGIVHINAQPLLAP---GDGPIVLVLSPTRELAVQIQKECSKFGK 211
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
I+ + GG +Q + +G E+VIATPGRLID LE L + Y+VLDEADR
Sbjct: 212 SSRIRNTCVYGGVPKGQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADR 271
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D ++P+ R T M+SAT P V+ LAR YL
Sbjct: 272 MLDMGFEPQIRKIVD-----QIRPD------------RQTLMWSATWPKEVQNLARDYLN 314
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELG-DKTA--IVFVNTKKNAD 528
+P+ V IG+ A+ I+Q V ++ + EK R+ + L+ DK + +VF +TK+ D
Sbjct: 315 DPIQVQIGSLELAASHTITQLVEVITDFEKRDRMVKHLEVASQDKESKILVFASTKRTCD 374
Query: 529 MVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVIN 588
+ K L + G+ +HG K Q +R+ L FR R ++VATDVA RGID+ + +VIN
Sbjct: 375 EITKYLREDGWPALAIHGDKDQRERDWVLAEFREGRSPIMVATDVAARGIDVKGINYVIN 434
Query: 589 YDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 648
YDMPGNIE Y HRIGRTGRAG TG A +F T + + L ++ ++ +PPEL K++
Sbjct: 435 YDMPGNIEDYVHRIGRTGRAGATGTAISFFTEENKSLGASLISIMREAKQTIPPELLKYD 494
>gi|307215190|gb|EFN89962.1| Probable ATP-dependent RNA helicase DDX17 [Harpegnathos saltator]
Length = 540
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/429 (38%), Positives = 254/429 (59%), Gaps = 27/429 (6%)
Query: 223 EEMTERDWRI---FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
E + RD R+ +R + I+ +G IP P+ N+ E +L+ + + G+ P+ IQ
Sbjct: 51 EAVQNRDPRVVEQYRSEKEITLRGKNIPNPVFNFGEAGFPEYVLKEITKQGFNEPTSIQA 110
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
P+ L RD++GIA TGSGKT +++LP + +I+ P +S + +GP A+V+APTREL
Sbjct: 111 QGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLSRK---DGPIALVLAPTREL 167
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
AQQI++ F H GI+ + GG Q + G E+VIATPGRL+D LE L
Sbjct: 168 AQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDSGVEIVIATPGRLLDFLESGKTNL 227
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATM 459
+C Y+VLDEADRM+DMGFEPQ+ +++ ++P+ R T M+SAT
Sbjct: 228 KRCTYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD------------RQTLMWSATW 270
Query: 460 PPAVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDEL---GDK 515
P V+ LA +L++ + +G+ A I Q + + ++ EK ++L LL E+ +
Sbjct: 271 PKEVKNLAEDFLKDYAQINVGSLQLAANHNILQIIDVCQDYEKENKLSTLLKEIMAESEN 330
Query: 516 TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
IVF+ TK+ D + + + + G+ +HG K+Q++R+ L+ FR+ + +LVATDVA
Sbjct: 331 KTIVFIETKRRVDEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAA 390
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ DV VIN+D P E Y HRIGRTGR KTG A TF T ++++ DL Q+L +
Sbjct: 391 RGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKE 450
Query: 636 SNSPVPPEL 644
+N + P+L
Sbjct: 451 ANQVINPKL 459
>gi|159463584|ref|XP_001690022.1| DEAD-box RNA helicase [Chlamydomonas reinhardtii]
gi|158284010|gb|EDP09760.1| DEAD-box RNA helicase [Chlamydomonas reinhardtii]
Length = 513
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 247/416 (59%), Gaps = 22/416 (5%)
Query: 233 FREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVI 292
+R + I G +P+P++ + E +L V R G+K P+PIQ P+ L RD+I
Sbjct: 91 YRREKQIHVYGDGVPKPVKTFEEASFPEYVLEEVLRAGFKEPTPIQCQGWPMALLGRDLI 150
Query: 293 GIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
G+AETGSGKT A++LP + +I+ P + +GP +V+APTRELA QI++E +F
Sbjct: 151 GLAETGSGKTLAYLLPAVVHINAQPYL---QSGDGPIVLVLAPTRELAVQIQQECQRFGA 207
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
IK + GG Q +R G E+VIATPGRLID L+ R L + Y+VLDEADR
Sbjct: 208 SSRIKNTVVYGGAPKGPQARDLRGGVEIVIATPGRLIDMLDSRITNLRRVTYLVLDEADR 267
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++D ++P+ R T ++SAT P V+ +AR +L+
Sbjct: 268 MLDMGFEPQIRKIVD-----QIRPD------------RQTLLWSATWPKEVQAIARDFLK 310
Query: 473 NPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLD-ELGDKTAIVFVNTKKNADMV 530
+P V IG+ KA I Q V M++ K+ RL++LLD E+ + ++FV TK+ D +
Sbjct: 311 DPYQVIIGSPDLKANHNIRQVVEMVEGFAKYPRLRKLLDGEMDGRRILIFVETKRGCDEL 370
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L GY LHG KSQ++R+ L+ F+ + +++ATDVA RG+D+ D+ V+NYD
Sbjct: 371 VRQLRTDGYPALGLHGDKSQQERDWVLQEFKNGTHPIMLATDVAARGLDVKDIKVVVNYD 430
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 646
MP E Y HRIGRTGRAG TG A +F T D + + ++ ++ PPEL +
Sbjct: 431 MPKTAEDYVHRIGRTGRAGATGTAYSFFTNGDARLARQVVDVMQEAGQQPPPELMQ 486
>gi|254510324|ref|ZP_05122391.1| dead/deah box helicase domain protein [Rhodobacteraceae bacterium
KLH11]
gi|221534035|gb|EEE37023.1| dead/deah box helicase domain protein [Rhodobacteraceae bacterium
KLH11]
Length = 455
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/415 (40%), Positives = 238/415 (57%), Gaps = 35/415 (8%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
M + E L P++L+A+E GY++P+PIQ AIP L+ RDV+GIA+TG+GKTA+F LPM
Sbjct: 6 MTKFNELNLNPKVLKAIEEAGYESPTPIQEGAIPAALEGRDVLGIAQTGTGKTASFTLPM 65
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
+T ++R A P ++V+ PTRELA Q+ E +A +L + ++GG S +E
Sbjct: 66 ITLLAR-----GRARARMPRSLVLCPTRELAAQVAENFDTYAKHLKLTKALLIGGVSFKE 120
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+IATPGRL+D ER +L +V+DEADRM+DMGF P + +
Sbjct: 121 QDALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLT 180
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T FSATM P +ER+ +L P V + A+E I
Sbjct: 181 P-----------------FTRQTLFFSATMAPEIERITDTFLSAPTRVEVARQATASETI 223
Query: 490 SQHVVMMK-------ESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYR 540
Q VVM K S+K L+ L+D GDK AI+F N K + D+ AK+L K GY
Sbjct: 224 EQGVVMFKGGRRDREASQKRKTLRALIDAEGDKCTNAIIFCNRKTDVDICAKSLKKYGYD 283
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +L+GFR +LVA+DVA RG+D+P V+HV N+D+PG+ E Y H
Sbjct: 284 AAAIHGDLDQSQRMKTLDGFRDGTLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVH 343
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS----NSPVPPELAKHEASK 651
RIGRTGRAG+ G A T + D ++ ++ + ++PV + K EA K
Sbjct: 344 RIGRTGRAGREGKAITICSGRDEKALTAIESLIQKEIPRIDNPVKADEPKPEAPK 398
>gi|395736563|ref|XP_002816330.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Pongo abelii]
Length = 802
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 262/471 (55%), Gaps = 36/471 (7%)
Query: 186 VEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKK-LEEMTERDWRIFREDFNISYKGS 244
+E E A + +KE A + T+D + W+ + + M+E R+ ++I +G
Sbjct: 297 LESVAEGRALMSVKEMAKGI--TYDDPIKTSWTPPRYVLNMSEERHERVRKKYHILVEGD 354
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P++++ E K +LR +++ G +P+PIQ+ IP L RD+IGIA TGSGKT
Sbjct: 355 GIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLV 414
Query: 305 FVLPMLTYI----SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLG----- 355
F LP++ + RLP ++ EGPY +++ P+RELA+Q + L
Sbjct: 415 FTLPVIMFCLEQEKRLP----FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 470
Query: 356 -IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
++ +GG S++EQ IR G +++ATPGRL+D L+++ L+ C Y+ LDEADRMI
Sbjct: 471 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 530
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFE + + S K + R T +FSATMP ++ A+ L P
Sbjct: 531 DMGFEGDIRTIF-----SYFKGQ------------RQTLLFSATMPKKIQNFAKSALVKP 573
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNL 534
V + +G AG A+ + Q V +KE K L L + ++F K + D + + L
Sbjct: 574 VTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKT-PPPVLIFAEKKADVDAIHEYL 632
Query: 535 DKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGN 594
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP
Sbjct: 633 LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEE 692
Query: 595 IEMYTHRIGRTGRAGKTGVATTFLT-FHDTDVFYDLKQMLIQSNSPVPPEL 644
IE Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 693 IENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 743
>gi|403160809|ref|XP_003321253.2| hypothetical protein PGTG_02295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170406|gb|EFP76834.2| hypothetical protein PGTG_02295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 546
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 259/430 (60%), Gaps = 23/430 (5%)
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
+ ++ +ERD FR + I G IP+P+ N++E ++ + G+ PSPIQ
Sbjct: 79 DPRITSRSERDINQFRAEKEIQVFGKNIPKPISNFSEAGFPDYIMSEIRNAGFNAPSPIQ 138
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRE 338
A P+ L RDV+ ++ TGSGKT AF +P + +I+ P ++ +GP +++APTRE
Sbjct: 139 CQAWPMALSGRDVVAVSATGSGKTIAFSIPAMIHINAQPLLAP---GDGPIVLILAPTRE 195
Query: 339 LAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAV 398
LA QI+ E KF I+ + GG +Q + +G E+VIATPGRLID LE R
Sbjct: 196 LAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLTRGAEIVIATPGRLIDMLESRKTN 255
Query: 399 LNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSAT 458
L++ Y+V+DEADRM+DMGFEPQ+ +++ ++P+ R T MFSAT
Sbjct: 256 LHRVTYLVMDEADRMLDMGFEPQIKKIVE-----QIRPD------------RQTLMFSAT 298
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATEL-ISQHVVMMKESEKFSRLQRLLDELGDKTA 517
P V+RLA +YL++ + V +G+ + I+Q V + + EK +L + L+++ ++A
Sbjct: 299 WPKEVQRLASEYLKDFIQVNVGSLDLTANINITQIVEVCSDFEKRGKLIKHLEKISSESA 358
Query: 518 --IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
++FV TK+ AD + K L + G+ +HG K Q++R+ LE F++ R +++ATDVA
Sbjct: 359 KVLIFVGTKRVADDLTKYLRQDGWPSLAIHGDKQQQERDWVLEEFKSGRSPIMIATDVAS 418
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ D+A+VINYDMP IE Y HRIGRTGRAG+TG A ++++ + + +L ++L
Sbjct: 419 RGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISADQSKLARELVKILRD 478
Query: 636 SNSPVPPELA 645
+ VP L
Sbjct: 479 AKQIVPSALV 488
>gi|168015786|ref|XP_001760431.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688445|gb|EDQ74822.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 675
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 180/453 (39%), Positives = 261/453 (57%), Gaps = 32/453 (7%)
Query: 199 KEEAADLYDTFDMRVDRHWSEKKLE---EMTERDWRIFREDFNISYKGSKIPRPMRNWAE 255
++ A +YD D D ++ ++E + D +R+ +S G +P P ++
Sbjct: 102 QKHGAGVYDDADR--DGYYKRPRVEAYANVPTSDIDSYRKLHEVSALGENVPAPFLSFEA 159
Query: 256 GKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR 315
L P++LR ++ G+K+P+PIQ + P+ +Q RD++ IA+TGSGKT +++P ++ R
Sbjct: 160 VGLPPDMLREIQAAGFKSPTPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPAFLHLER 219
Query: 316 LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIR 375
N GP +V+APTRELA QI+EE VKF I + GG Q I
Sbjct: 220 ----HRNNSRLGPSVLVIAPTRELATQIQEECVKFGRSSRITSTCVYGGAPKGPQLRDIE 275
Query: 376 QGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLK 435
+G ++VIATPGRL D LE + L Q +Y+VLDEADRM+DMGFEPQ+ +++ + S
Sbjct: 276 RGADIVIATPGRLNDFLEVKKISLRQVSYLVLDEADRMLDMGFEPQIRKIVNEILSR--- 332
Query: 436 PENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGK--ATELISQHV 493
R T M++AT P V ++A L NPV V IG + A + I+QHV
Sbjct: 333 --------------RQTLMYTATWPKEVRKIAGDLLINPVQVNIGNTDELSANKSITQHV 378
Query: 494 VMMKESEKFSRLQRLL--DELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQE 551
++ EK RL+++L E G K IVF +TK+ DM+++NL + + +HG KSQ
Sbjct: 379 EVVVPYEKQRRLEQILRSQEPGSKI-IVFCSTKRMCDMLSRNLGR-DFGAAAIHGDKSQS 436
Query: 552 QREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKT 611
+R+ L FRT R +LVATDVA RG+DI D+ V+NYD P +E Y HRIGRTGRAG T
Sbjct: 437 ERDFVLSQFRTGRTPILVATDVAARGLDIKDIRFVVNYDFPTGVEDYVHRIGRTGRAGAT 496
Query: 612 GVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
G+A TF + D +L ++L +N VP EL
Sbjct: 497 GLAYTFFSEQDGKYAKELIKVLEGANQKVPQEL 529
>gi|405962641|gb|EKC28298.1| Putative ATP-dependent RNA helicase DDX46 [Crassostrea gigas]
Length = 913
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/427 (39%), Positives = 248/427 (58%), Gaps = 25/427 (5%)
Query: 225 MTERDWRIFREDF-NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIP 283
MT + +R + I +G P+P+++WA+ + +++ + ++ P+PIQ AIP
Sbjct: 223 MTTEEVEAYRTELEGIKVRGKNCPKPIKSWAQCGCSKKVMDVFRKNSFEKPTPIQSQAIP 282
Query: 284 LGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQI 343
+ RD+IGIA+TGSGKT AF++P+ +I PP+ +E +GP A++M PTRELA QI
Sbjct: 283 AIMSGRDLIGIAKTGSGKTLAFLIPLFRHIMDQPPL---DENDGPIAIIMTPTRELAMQI 339
Query: 344 EEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLN 400
E KF LG+K V + GG I EQ +++GCE+++ TPGR+ID L R L
Sbjct: 340 TSECKKFTKPLGLKAVCVYGGTGISEQIAELKRGCEIIVCTPGRMIDMLSANNGRVTNLR 399
Query: 401 QCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMP 460
+C YVVLDEADRM DMGFEPQV ++D+ ++P+ R T MFSAT P
Sbjct: 400 RCTYVVLDEADRMFDMGFEPQVTKIVDS-----IRPD------------RQTVMFSATFP 442
Query: 461 PAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIV 519
+E LARK L+ P+ V +G + Q V+++ E +KF +L LL +K + +V
Sbjct: 443 RQMEALARKILQKPIEVQVGGRSVVCRDVDQSVIVIDEDKKFLKLLELLGLYQEKGSVLV 502
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+ +++AD + K L Y +LHGG Q R+ ++ F+ +LVAT VA RG+D
Sbjct: 503 FVDKQEHADELMKELMTHSYPCMSLHGGIDQYDRDSTIVDFKNGNVKLLVATSVAARGLD 562
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ + V+NYD P + E Y HR GRTGRAG G A TF+T D+ + L S +
Sbjct: 563 VKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAFTFITPEQERYAGDIIKALELSGAT 622
Query: 640 VPPELAK 646
V +L K
Sbjct: 623 VNADLEK 629
>gi|308473123|ref|XP_003098787.1| CRE-VBH-1 protein [Caenorhabditis remanei]
gi|308268083|gb|EFP12036.1| CRE-VBH-1 protein [Caenorhabditis remanei]
Length = 686
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 251/421 (59%), Gaps = 26/421 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+ + G +P + N++E P ++ V GY P+P+Q +IP L RD++
Sbjct: 153 ENIPVEVSGDAVPAAIENFSEAGFGPAVMENVTHSGYTKPTPVQKHSIPTLLANRDLMSC 212
Query: 295 AETGSGKTAAFVLPMLTYIS-------RLPPISEENEAEGPYAVVMAPTRELAQQIEEET 347
A+TGSGKTAAF+LP++ +I + P + P A+V++PTRELA QI +E
Sbjct: 213 AQTGSGKTAAFLLPIIQHIMAGGPEMIKTPAFTNGRRTYFPSALVLSPTRELAIQIHKEA 272
Query: 348 VKFAHYLGIKVVSIVGG-QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVV 406
KF++ ++ + GG ++ +Q R+R G ++IATPGRLID +E+ + L C Y+V
Sbjct: 273 SKFSYKTNLQTAILYGGRENYRDQVNRLRSGAHILIATPGRLIDIIEQGFIGLAGCRYLV 332
Query: 407 LDEADRMIDMGFEPQVVGVLD-AMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVER 465
LDEADRM+DMGFEPQ+ ++ MP+ + RTT MFSAT P ++
Sbjct: 333 LDEADRMLDMGFEPQIRKIVGQGMPA---------------KTARTTAMFSATFPKEIQL 377
Query: 466 LARKYLR-NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQR-LLDELGDKTAIVFVNT 523
LA+ +L+ N V + +G G +E I Q ++ + E EK L L++E +VFV T
Sbjct: 378 LAKDFLKENYVFLAVGRVGSTSENIEQRLLWVNEMEKRQNLMEILMNEDSTNLVLVFVET 437
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ A+ +A L++ R ++HG Q +RE +LE FR+ ++ +LVAT VA RG+DIP+V
Sbjct: 438 KRGANELAYFLNRQQIRSVSIHGDLKQIERERNLEMFRSGQFPILVATAVAARGLDIPNV 497
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
HVINYD+PG+ + Y HRIGRTGR G G+AT+F + + DLK +++++N VP
Sbjct: 498 RHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLILEANQEVPDW 557
Query: 644 L 644
L
Sbjct: 558 L 558
>gi|326426645|gb|EGD72215.1| DEAD box ATP-dependent RNA helicase [Salpingoeca sp. ATCC 50818]
Length = 1054
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 243/411 (59%), Gaps = 24/411 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
NI +G PRP++ W + L +L + + Y +P+PIQ A+P+ + RD++GIA+T
Sbjct: 301 NIKTRGRDCPRPIKTWNQSGLPRRVLDVLRALKYDDPTPIQAQALPVIMSGRDMLGIAKT 360
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPML ++ + + EG A++++PTRELA Q E KF +L ++
Sbjct: 361 GSGKTLAFLLPMLRHVLDQRRV---RQGEGCIALILSPTRELAVQTYTEAKKFTKHLDLR 417
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE-RRYAVLN--QCNYVVLDEADRMI 414
+ + GG I +Q +++ E+++ TPGR+ID L R V N + YVVLDEADRM
Sbjct: 418 IACVYGGSDIADQIAHLKRSVEIIVCTPGRMIDMLTVNRGKVTNPRRITYVVLDEADRMF 477
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ +LD N++P+ R T MFSAT P A+E LARK L+ P
Sbjct: 478 DMGFEPQVMRILD-----NIRPD------------RQTVMFSATFPRAMEVLARKILKKP 520
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD-ELGDKTAIVFVNTKKNADMVAKN 533
+ + +G ++ + QHV++++E KF++L LL + IVFV+ ++ ADM+ N
Sbjct: 521 IEIQVGGRSIVSDTVEQHVLVLEEQNKFNKLLELLGIYYVQGSVIVFVHRQEKADMLLTN 580
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L GY LHG SQE R+ ++ F+ +L+AT VA RG+D+ + V+NYD P
Sbjct: 581 LMGHGYMSLPLHGAVSQEDRQSNIRDFKLGNVKILIATSVAARGLDVKSLKLVVNYDCPN 640
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ E Y HR GRTGRAG G A TF+T D + + + L S+ VP +L
Sbjct: 641 HYEDYVHRCGRTGRAGNKGTAFTFVTKDDKQLAGHVIKALELSSQEVPADL 691
>gi|385251409|ref|NP_001245264.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Macaca mulatta]
gi|384945572|gb|AFI36391.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
gi|384950044|gb|AFI38627.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
gi|384950046|gb|AFI38628.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
gi|384950048|gb|AFI38629.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
gi|384950050|gb|AFI38630.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
gi|384950054|gb|AFI38632.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
gi|387542294|gb|AFJ71774.1| ATP-dependent RNA helicase DDX3Y [Macaca mulatta]
Length = 659
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 170/423 (40%), Positives = 249/423 (58%), Gaps = 28/423 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + GS P + N+++ + ++ +E Y P+P+Q AIP+ +RD++
Sbjct: 163 DDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMAC 222
Query: 295 AETGSGKTAAFVLPMLTYISRLPP-----ISEENEAEG-----PYAVVMAPTRELAQQIE 344
A+TGSGKTAAF+LP+L+ I P +EN G P ++V+APTRELA QI
Sbjct: 223 AQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 282
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE KF++ ++ + GG I +Q + +GC +++ATPGRL+D +ER L+ C Y
Sbjct: 283 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 342
Query: 405 VVLDEADRMIDMGFEPQVVGVL--DAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPA 462
+VLDEADRM+DMGFEPQ+ ++ D MP + R T MFSAT P
Sbjct: 343 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGV---------------RHTMMFSATFPKE 387
Query: 463 VERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFV 521
++ LAR +L + + +G G +E I+Q VV +++ +K S L LL G D +VFV
Sbjct: 388 IQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDLLGATGRDSLTLVFV 447
Query: 522 NTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIP 581
TKK AD + L GY T++HG +SQ RE +L FR+ + +LVAT VA RG+DI
Sbjct: 448 ETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS 507
Query: 582 DVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 641
+V HVIN+D+P +IE Y HRIGRTGR G G+AT+F + ++ DL +L+++ VP
Sbjct: 508 NVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 567
Query: 642 PEL 644
L
Sbjct: 568 SWL 570
>gi|149914601|ref|ZP_01903131.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. AzwK-3b]
gi|149811394|gb|EDM71229.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. AzwK-3b]
Length = 511
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 233/399 (58%), Gaps = 32/399 (8%)
Query: 250 MRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 309
M +++ L P++L+AVE GY +P+PIQ AIP L+ RD++GIA+TG+GKTA+F LPM
Sbjct: 1 MTKFSDLNLNPKVLKAVEEAGYTDPTPIQAGAIPPALEGRDILGIAQTGTGKTASFTLPM 60
Query: 310 LTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE 369
L+ ++R A P ++V+ PTRELA Q+ E ++ L + ++GG S +E
Sbjct: 61 LSLLAR-----GRARARMPRSLVLCPTRELAAQVAENFDTYSKNLKLTKALLIGGVSFKE 115
Query: 370 QGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAM 429
Q I +G +V+I TPGRL+D ER +L +V+DEADRM+DMGF P + +
Sbjct: 116 QDKLIDKGVDVLICTPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLT 175
Query: 430 PSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELI 489
P R T+ FSATM P +ER+ +L+NPV + + A+E I
Sbjct: 176 P-----------------FTRQTFFFSATMAPEIERITNTFLQNPVRIEVARQATASETI 218
Query: 490 SQHVVMMK-------ESEKFSRLQRLLDELGDKT--AIVFVNTKKNADMVAKNLDKLGYR 540
Q VVM K +SEK L+ ++D G+ AIVF N K + D+V+K+L K GY
Sbjct: 219 EQGVVMFKPSRRERADSEKRDILRAIIDAEGEACTNAIVFCNRKVDVDIVSKSLKKHGYD 278
Query: 541 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 600
+HG Q QR +L+GFR +LVA+DVA RG+D+P V+HV NYD+PG+ E Y H
Sbjct: 279 AAPIHGDLDQSQRTRTLDGFRAGDLKILVASDVAARGLDVPSVSHVFNYDVPGHAEDYVH 338
Query: 601 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
RIGRTGRAG++G A D D D + LIQ P
Sbjct: 339 RIGRTGRAGRSGKAMMISGPRD-DKNLDAIERLIQKQIP 376
>gi|17510309|ref|NP_491113.1| Protein VBH-1, isoform a [Caenorhabditis elegans]
gi|373220252|emb|CCD72826.1| Protein VBH-1, isoform a [Caenorhabditis elegans]
Length = 641
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 171/440 (38%), Positives = 258/440 (58%), Gaps = 27/440 (6%)
Query: 217 WSEKKLEEMTERDWRIFR-EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
+SE L T+ + E+ + G +P + ++ E P ++ V R GY P+
Sbjct: 85 YSESNLFHRTDSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPT 144
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYI-------SRLPPISEENEAEGP 328
P+Q +IP L RD++ A+TGSGKTAAF+LP++ +I + P + P
Sbjct: 145 PVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYP 204
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG-QSIEEQGFRIRQGCEVVIATPGR 387
A+V++PTRELA QI +E KF++ I+ + GG ++ +Q R+R G ++IATPGR
Sbjct: 205 CALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGR 264
Query: 388 LIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD-AMPSSNLKPENEDEELDEK 446
LID +E+ + L C Y+VLDEADRM+DMGFEPQ+ ++ MP
Sbjct: 265 LIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMP---------------P 309
Query: 447 RIYRTTYMFSATMPPAVERLARKYLR-NPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
+ RTT MFSAT P ++ LA+ +L+ N + + +G G +E I Q ++ + E EK S L
Sbjct: 310 KTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNL 369
Query: 506 QR-LLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
L++E + +VFV TK+ A+ +A L++ R ++HG Q +RE +LE FR+ +
Sbjct: 370 MEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQ 429
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+LVAT VA RG+DIP+V HVINYD+PG+ + Y HRIGRTGR G G+AT+F +
Sbjct: 430 CPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRG 489
Query: 625 VFYDLKQMLIQSNSPVPPEL 644
+ DLK ++++SN VP L
Sbjct: 490 IGRDLKNLIVESNQEVPEWL 509
>gi|328875962|gb|EGG24326.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 257/435 (59%), Gaps = 24/435 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIF--REDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGY 271
D+ + E+ E R+F R D +I G+ + P+ + +++++++ GY
Sbjct: 292 DKCFYEEHAEISALTPERVFQLRRDLDIRATGNDLINPITGFGHIGFDDIMIQSIQKQGY 351
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
+ P+ IQ A+P+ L RD+I IA+TGSGKTA+F+ P + +I P + + +GP AV
Sbjct: 352 ETPTSIQKQAVPIALSGRDLIAIAKTGSGKTASFIWPAIVHIMNQPYLEK---GDGPIAV 408
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++PTRELA QI ET KFA IK + GG + Q ++ GCE+++ TPGR+ID
Sbjct: 409 FVSPTRELAHQIYMETQKFAKPYKIKTTVVYGGVTKLLQCRELKAGCEILVGTPGRIIDM 468
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
++ + +N+C ++VLDEADRM DMGFEPQV ++ ++P+ R
Sbjct: 469 IKLKATKMNRCTFLVLDEADRMFDMGFEPQVQSII-----GQIRPD------------RQ 511
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFSRLQRLLD 510
T +FSAT P A+E+LAR L +P+ ++IG +G A + I Q V V+ + EK+ L L
Sbjct: 512 TLLFSATFPNAIEQLARNILTDPIRISIGNSGSANQDIKQFVKVLPSDGEKWGWLTETLP 571
Query: 511 -ELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLV 569
L + ++FV+TK + ++ NL K G+ +HG K Q++R + F++ +LV
Sbjct: 572 LMLTEGNVVIFVSTKVAVEQLSTNLLKFGFLADGIHGDKDQQERTQIISRFKSGTVPILV 631
Query: 570 ATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDL 629
ATDVA RG+DI + +V+N+D+ +I+ +THR+GRTGRAG G A T +T DT DL
Sbjct: 632 ATDVAARGLDISLIKNVVNFDVSRDIDSHTHRVGRTGRAGTQGTAHTLITPKDTHFSADL 691
Query: 630 KQMLIQSNSPVPPEL 644
+ L ++N VPPEL
Sbjct: 692 VRHLEEANQNVPPEL 706
>gi|225445460|ref|XP_002285108.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
vinifera]
Length = 615
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 167/420 (39%), Positives = 250/420 (59%), Gaps = 20/420 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + GS IP P+ +AE L L + + R Y P+PIQ AIP+ + RD++
Sbjct: 117 EDIPVEASGSDIPPPVSAFAEIHLGEGLNQNIRRCKYVKPTPIQRHAIPIAMAGRDLMAC 176
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
A+TGSGKTAAF P++ I R P A++++PTREL+ QI EE KF++
Sbjct: 177 AQTGSGKTAAFCFPIICGILRNQLSRGGARLACPTALILSPTRELSCQIHEEAKKFSYKT 236
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
G+KVV GG I +Q + +G ++++ATPGRL+D +ER L Y+ LDEADRM+
Sbjct: 237 GLKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRML 296
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA +L N
Sbjct: 297 DMGFEPQIRKIVEQM---DMPPPGA----------RQTMLFSATFPNEIQRLAADFLSNY 343
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-DELGDKT------AIVFVNTKKNA 527
+ +++G G +T+LI Q V +++++K L LL ++ ++T +VFV TK+
Sbjct: 344 IFLSVGRVGSSTDLIVQRVEFVEDTDKRYHLMDLLQSQMTNRTPKKYALTLVFVETKRGV 403
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + + L G T +HG K Q +RE +L+ F++ ++VATDVA RG+DIP VAHVI
Sbjct: 404 DALEQWLCMNGLAATAIHGDKVQMERERALKSFKSGATPIMVATDVAARGLDIPHVAHVI 463
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
N+D+P I+ Y HRIGRTGRAGK+G+AT F + + L +++ +SN VP L ++
Sbjct: 464 NFDLPKAIDDYVHRIGRTGRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQY 523
>gi|430812755|emb|CCJ29835.1| unnamed protein product [Pneumocystis jirovecii]
Length = 631
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 252/422 (59%), Gaps = 26/422 (6%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
+D + G+ +P P+ + L LL +E YKNP+P+Q +I + +Q RD++
Sbjct: 141 DDIPVEVSGTDVPEPISVFTSPPLDSHLLSNIELANYKNPTPVQKHSISIVIQDRDLMAC 200
Query: 295 AETGSGKTAAFVLPMLTYI----SRLPPISEENEAEG------PYAVVMAPTRELAQQIE 344
A+TGSGKT F+ P+L+ + R PPI + P +++APTREL QI
Sbjct: 201 AQTGSGKTGGFLFPILSKMFQTGPRDPPIPSGYASYARSRKAYPMTLILAPTRELVNQIH 260
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
EE+ KF++ +K I GG I Q +I +GC+++ ATPGRL+D +ER L+ Y
Sbjct: 261 EESRKFSYRSWVKPCVIYGGTDIGSQLRQIERGCDMLTATPGRLVDLIERGRISLSNIKY 320
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ +++ N++ +R T MFSAT P ++
Sbjct: 321 LVLDEADRMLDMGFEPQIRRIVEGEDMPNVE-------------HRQTLMFSATFPKDIQ 367
Query: 465 RLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL--GDKTAIVFVN 522
LAR +L++ V +++G G +E I+Q + +++ +K S L +L + G T ++FV
Sbjct: 368 ILARDFLKDYVFLSVGRVGSTSENITQKIEYVEDMDKKSVLLDILHSMPRGGLT-LIFVE 426
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TK+ AD ++ L + T++HG ++Q +RE +LE FR R ++VAT VA RG+DIP+
Sbjct: 427 TKRMADTLSDFLLSSNFPATSIHGDRTQREREKALEMFRGGRTPIMVATAVAARGLDIPN 486
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V HVINYD+P +I+ Y HRIGRTGRAG TG++T F + + DL ++L ++N +P
Sbjct: 487 VTHVINYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGNRSIVRDLLELLKEANQEIPS 546
Query: 643 EL 644
L
Sbjct: 547 FL 548
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,465,542,437
Number of Sequences: 23463169
Number of extensions: 461874211
Number of successful extensions: 4306372
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 41962
Number of HSP's successfully gapped in prelim test: 31962
Number of HSP's that attempted gapping in prelim test: 3366122
Number of HSP's gapped (non-prelim): 417896
length of query: 671
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 521
effective length of database: 8,839,720,017
effective search space: 4605494128857
effective search space used: 4605494128857
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)