BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038133
(671 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana
GN=RH21 PE=2 SV=1
Length = 733
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/592 (87%), Positives = 559/592 (94%)
Query: 78 AKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRD 137
KARE+AR+EKL ERE+E+EL+ IKEQYLG KKPKKRVI+PSEKFRFSFDWENTEDTSRD
Sbjct: 140 VKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVIRPSEKFRFSFDWENTEDTSRD 199
Query: 138 MNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALK 197
MN LYQNPHEAQLLFGRGFRAGMDRREQKK AAK+EKEMR+EIRKK+G+ EKPEEAAA +
Sbjct: 200 MNVLYQNPHEAQLLFGRGFRAGMDRREQKKQAAKHEKEMRDEIRKKDGIVEKPEEAAAQR 259
Query: 198 LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGK 257
++EEAAD YD+FDMRVDRHWS+K+LEEMTERDWRIFREDFNISYKGS+IPRPMR+W E K
Sbjct: 260 VREEAADTYDSFDMRVDRHWSDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESK 319
Query: 258 LTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLP 317
LT ELL+AVER GYK PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML YISRLP
Sbjct: 320 LTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLP 379
Query: 318 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQG 377
P+SEENE EGPYAVVMAPTRELAQQIEEETVKFAHYLG +V SIVGGQSIEEQG +I QG
Sbjct: 380 PMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQG 439
Query: 378 CEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 437
CE+VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV GVLDAMPSSNLKPE
Sbjct: 440 CEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPE 499
Query: 438 NEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK 497
NE+EELDEK+IYRTTYMFSATMPP VERLARKYLRNPVVVTIGTAGK T+LISQHV+MMK
Sbjct: 500 NEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMK 559
Query: 498 ESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
ESEKF RLQ+LLDELG+KTAIVFVNTKKN D +AKNLDK GYRVTTLHGGKSQEQREISL
Sbjct: 560 ESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISL 619
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
EGFR KRYNVLVATDV GRGIDIPDVAHVINYDMP +IEMYTHRIGRTGRAGK+GVAT+F
Sbjct: 620 EGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSF 679
Query: 618 LTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVF 669
LT HDT+VFYDLKQML+QSNS VPPELA+HEAS+FKPGT+PDRPPR +DTV+
Sbjct: 680 LTLHDTEVFYDLKQMLVQSNSAVPPELARHEASRFKPGTVPDRPPRHSDTVY 731
>sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp.
japonica GN=Os03g0708600 PE=2 SV=1
Length = 736
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/589 (83%), Positives = 547/589 (92%)
Query: 82 ERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNAL 141
E+ RLEK+AERERE+EL+ IKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMN+L
Sbjct: 146 EKDRLEKMAEREREKELDAIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSL 205
Query: 142 YQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEE 201
YQ+PHEA+LL+GRGF AG+DRREQKK+AA +EKE R E R+K G++++PE+ A K + +
Sbjct: 206 YQSPHEARLLYGRGFLAGIDRREQKKVAAAHEKETRAEQRRKAGLDDRPEDDAVDKKEAD 265
Query: 202 AADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE 261
AA YD FDMRVDRHW++K L+EMTERDWRIFREDFNISYKGSK+PRPMR W+E KL E
Sbjct: 266 AAAKYDAFDMRVDRHWTQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLGTE 325
Query: 262 LLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE 321
LLRAVE+ GYK PSPIQMA+IPLGLQQRDVIGIAETGSGKTAAFVLPML+YI+RLPPISE
Sbjct: 326 LLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISE 385
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
ENEAEGPYAVVMAPTRELAQQIEEETVKFA YLGIKVVSIVGGQSIEEQGF+IRQGCEVV
Sbjct: 386 ENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVV 445
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
IATPGRL+DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE
Sbjct: 446 IATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 505
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEK 501
ELD K IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT+LI+Q+V+M KESEK
Sbjct: 506 ELDAKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTKESEK 565
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
SRLQ++L +LGDK AIVF NTKK+AD AK+LDK G+RVTTLHGGKSQEQRE SL+GFR
Sbjct: 566 MSRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSLDGFR 625
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+R+ VLVATDVAGRGIDIPDVAHVINY+MP +I+ YTHRIGRTGRAGK G+AT+FLT
Sbjct: 626 NRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLE 685
Query: 622 DTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPPRRNDTVFA 670
+TD+F+DLKQMLIQSNSPVPPELA+HEASKFKPG++PDRPPRRNDTV+A
Sbjct: 686 NTDIFFDLKQMLIQSNSPVPPELARHEASKFKPGSVPDRPPRRNDTVYA 734
>sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis
thaliana GN=RH44 PE=5 SV=2
Length = 622
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/662 (62%), Positives = 486/662 (73%), Gaps = 77/662 (11%)
Query: 11 NNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERH 70
N KP+FLTKA R++LAL+R Q++IA + RR Q +S+ + + + RD +RERH
Sbjct: 22 NLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQ---ISRSNSDNDDGNRPRDVKRERH 78
Query: 71 R-----REREEEAKARER---ARLEKLAERERERELELIKEQYLGSKKPKKRVI-KPSEK 121
R R RE + + RER AR+EKL +RE+E+ +KEQYLG+ KPKKRVI KPS+
Sbjct: 79 RSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKN 138
Query: 122 FRFSFDWENTEDT-SRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI 180
FRF DWENTEDT S +MN LYQNPHEAQ LFGRG RAG+DRREQKKL + + E
Sbjct: 139 FRF--DWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKRE- 195
Query: 181 RKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNIS 240
D+HWSEKKLEEM ERDWRIF+EDFNIS
Sbjct: 196 -------------------------------EEDKHWSEKKLEEMNERDWRIFKEDFNIS 224
Query: 241 YKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSG 300
Y+GSKIP PMRNW E IPLGL+QRDVIGI+ TGSG
Sbjct: 225 YRGSKIPHPMRNWEE-------------------------TIPLGLEQRDVIGISATGSG 259
Query: 301 KTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVS 360
KTAAFVLPML YISRLPP+ EEN+ EGPYA+VM PTRELA QIEEETVKF+ YLG K VS
Sbjct: 260 KTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVS 319
Query: 361 IVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEP 420
I G +SIE+Q ++ QGCE+VIATPGRL+DCLERRY VLNQCNY+VLDEADRMIDM FEP
Sbjct: 320 ITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEP 379
Query: 421 QVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG 480
QV VLD MP SNLKPE EDEEL+EK+IYRTTYMFSATM +VERLARK+LRNPVVVTI
Sbjct: 380 QVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTI- 438
Query: 481 TAGKATELISQHVVMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLG- 538
G+ T+ I+Q V+M KES+KFSRL++L+D+LG DKTAIVFVNT+ D + KNL+K+G
Sbjct: 439 --GETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGR 496
Query: 539 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 598
RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VINYDMP +++Y
Sbjct: 497 CRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLY 556
Query: 599 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIP 658
THRIGRTGRAGKTGVATTFLT D DVFY LKQ L + NS VPPELA+HEASKFKPGT P
Sbjct: 557 THRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFP 616
Query: 659 DR 660
DR
Sbjct: 617 DR 618
>sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23
PE=1 SV=3
Length = 820
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/676 (51%), Positives = 470/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A L+ K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARLRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY VL++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23
PE=2 SV=1
Length = 820
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/676 (51%), Positives = 468/676 (69%), Gaps = 36/676 (5%)
Query: 15 PLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRN-------SSDSRDRER 67
P FL+KA+RE AL+RRQ+++ +++R E++++ Q Q GR RER
Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRER 220
Query: 68 ERHRREREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFD 127
E+ + R++ R EK ++ +EL IKE+YLG K ++R +++ +F F+
Sbjct: 221 MERETNGNEDEEGRQKIREEK----DKSKELHAIKERYLGGIKKRRRTRHLNDR-KFVFE 275
Query: 128 WENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVE 187
W+ +EDTS D N LY+ H+ QLL GRGF AG+D ++QK+ ++ ++ E K+ +E
Sbjct: 276 WDASEDTSIDYNPLYKERHQVQLL-GRGFIAGIDLKQQKREQSRFYGDLME---KRRTLE 331
Query: 188 EKPEEAAALK--LKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSK 245
EK +E A + K+EA +D DRHWS+KKL+EMT+RDWRIFRED++I+ KG K
Sbjct: 332 EKEQEEARFRKLRKKEAKQRWD------DRHWSQKKLDEMTDRDWRIFREDYSITTKGGK 385
Query: 246 IPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 305
IP P+R+W + L P +L +++ GYK P+PIQ AIP+GLQ RD+IG+AETGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 306 VLPMLTYISRLPPISE-ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGG 364
++P+L +I+ LP I E +GPYA+++APTRELAQQIEEET+KF LGI+ V+++GG
Sbjct: 446 LIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGG 505
Query: 365 QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVG 424
S E+QGFR+R GCE+VIATPGRLID LE RY V ++C YVVLDEADRMIDMGFEP V
Sbjct: 506 ISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQK 565
Query: 425 VLDAMPSSNLKPENEDEELDEKRI---------YRTTYMFSATMPPAVERLARKYLRNPV 475
+L+ MP SN KP+ ++ E EK + YR T MF+ATMPPAVERLAR YLR P
Sbjct: 566 ILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPA 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD 535
VV IG+AGK E + Q V +M ESEK +L +L++ D I+FVN KK D++AK+L+
Sbjct: 626 VVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLE 685
Query: 536 KLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNI 595
K+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NI
Sbjct: 686 KMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNI 745
Query: 596 EMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
E Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KP
Sbjct: 746 EDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKP 805
Query: 655 GTIPDRPPRRNDTVFA 670
GTI + RR +T+FA
Sbjct: 806 GTILTK-KRREETIFA 820
>sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28
PE=3 SV=1
Length = 816
Score = 585 bits (1509), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/708 (45%), Positives = 436/708 (61%), Gaps = 84/708 (11%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ---LLSQPQTHGRNSSDSRDRERERH 70
KP FL+KA RE+LALE+R +++ +Q+R++E +Q + +G +++ RD H
Sbjct: 101 KPKFLSKAAREKLALEKRAKEVEEQRRKRESEQDNRIPVGTVNGNGYGAANGRDGYERSH 160
Query: 71 RREREEE----------------------------------------AKARERARL--EK 88
+++ A +A + EK
Sbjct: 161 QQDNARRDSSFVPTGPRAMRNGQQNRPSSDKPNDMEPPPKSAKPATTAAGSSKASVAGEK 220
Query: 89 LAERERERELELIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALY 142
+ + LI+ +Y+G++ KK+ + +EK +F+F+W EDTS D N +Y
Sbjct: 221 RPANAEDLQAALIRTRYMGAETNQSTFSAKKKRRRTTEK-KFNFEWNAEEDTSPDYNPIY 279
Query: 143 QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE-- 200
QN EA L +GRG AG E L + + +EE+ EA + + +E
Sbjct: 280 QNRAEAGL-YGRGRLAGFAEDEAATL------------KYAKALEERDIEAGSARAREIV 326
Query: 201 --EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKL 258
E D +D+HWSEKKLE M ERDWRIF+EDFNIS KG IP PMR+W+E KL
Sbjct: 327 EMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRSWSESKL 386
Query: 259 TPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP 318
LL + +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP
Sbjct: 387 PKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPP 446
Query: 319 ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGC 378
++E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+EEQ + +R G
Sbjct: 447 LNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGA 506
Query: 379 EVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN 438
E++IATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP+
Sbjct: 507 EIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDT 566
Query: 439 EDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELIS 490
+D E L K YR T M++ATMPPAVE++A+KYLR P +VTIG G+A E +
Sbjct: 567 DDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVE 626
Query: 491 QHVVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
Q V + +K R +RL + L IVFVN K+N D VA+++ +G+ TLHG
Sbjct: 627 QRVEFVAGEDK--RKKRLNEILASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHG 684
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
K+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTG
Sbjct: 685 SKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTG 744
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
RAGK+GVA TFL D D YDLKQML++S+ S VP EL KHEA++ K
Sbjct: 745 RAGKSGVAITFLGNEDADTMYDLKQMLMKSSISRVPEELRKHEAAQQK 792
>sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp28 PE=3 SV=2
Length = 782
Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust.
Identities = 324/682 (47%), Positives = 429/682 (62%), Gaps = 49/682 (7%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQ------------EQQQQLLSQPQTHGRN--- 58
+P F++KA+RE+LALE+R +++ Q+RR + + P R+
Sbjct: 89 RPKFMSKAERERLALEKRAKEVDAQRRRTNGTPNGVDGMDLDTPSRGFRTPNGDSRSIPT 148
Query: 59 ------SSDSRDRERERHRREREEEAKARERARLEKL--AERERERELELIKEQYLGSKK 110
+ D R R + + +++K E E + LIK++Y+G+ +
Sbjct: 149 GPRAMRNGDGPTPTGPAAMRSRNDSGTTKSDKKVDKRFNEEDEAAAQAALIKQRYMGADQ 208
Query: 111 PK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQK 166
K+ K + +F+F+W EDTS D N LYQ+ HEA FGRG AG
Sbjct: 209 TSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANF-FGRGRLAGFGDDVAD 267
Query: 167 KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMT 226
+A K K + + R+ + A L+ E ++ ++D+HWSEKKLE M
Sbjct: 268 SVAKKYAKALEDRDREAGSIR------AREILEMERRRREESTRNQLDKHWSEKKLEHMR 321
Query: 227 ERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGL 286
ERDWRIF+EDFNI+ KG +P PMR+W E L LL V+RVGYK P+PIQ AAIP+ +
Sbjct: 322 ERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAM 381
Query: 287 QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVMAPTRELAQQIE 344
Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E + +GPYA+V+APTRELAQQIE
Sbjct: 382 QSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIE 441
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+ERR VL+QC Y
Sbjct: 442 IEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCY 501
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFS 456
V++DEADRMID+GFE V +LDA+P +N KP+ E+ E L K YR T M++
Sbjct: 502 VIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYRQTMMYT 561
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGD- 514
ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ E ++ RL +L GD
Sbjct: 562 ATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEILSS-GDF 620
Query: 515 -KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDV 573
IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L R +VLVATD+
Sbjct: 621 RPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDL 680
Query: 574 AGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQML 633
AGRGID+PDV+ VIN++M +IE YTHRIGRTGRAGK+GVA TFL D DV YDLKQML
Sbjct: 681 AGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQML 740
Query: 634 IQSN-SPVPPELAKHEASKFKP 654
I+S S VP EL KHEA++ KP
Sbjct: 741 IKSPISRVPEELRKHEAAQSKP 762
>sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp28 PE=3 SV=1
Length = 803
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/694 (46%), Positives = 435/694 (62%), Gaps = 62/694 (8%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKR--------RQEQQQQLLSQPQTH--GRN----- 58
+P FL++A+RE++ALE+R +++ ++R R Q +S H GR
Sbjct: 99 RPKFLSRAERERIALEKRAKEVEAERRLKASNGVDRSATQSPSVSSEVNHSDGRTIPTGP 158
Query: 59 ----SSDSRD-----RERERHRREREEEAKARERARLEKLAERERER----------ELE 99
SSD+ R H + R+ ++ LA + ++ ++
Sbjct: 159 RAMRSSDTPTAPAAMRNSHSHNKNRDLSPPPPPKSMSFGLASSKGDKRPVDDDEVAAQVA 218
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
L+K++Y+G+ + K+ K + +F+F+W EDTS D N LYQ+ HEA FGRG
Sbjct: 219 LVKQRYMGADQTSTFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANF-FGRG 277
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AG +A K + + + + G+ A L+ E ++ ++D+
Sbjct: 278 RLAGFGDDVADNVAKKYARALEDRDHEAGGIR------AREILEMERRRREESTRNQLDK 331
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L L+ V +VGYK P+
Sbjct: 332 HWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESGLPKRLMELVNKVGYKEPT 391
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVVM 333
PIQ AAIP+ +Q RD+IG+A TGSGKTA+F+LP+L YI+ LP I E + +GPYA+V+
Sbjct: 392 PIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVL 451
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+E
Sbjct: 452 APTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIE 511
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDE 445
RR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++E+ E +
Sbjct: 512 RRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAENSMAMSQHIGT 571
Query: 446 KRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRL 505
K YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V + +K R
Sbjct: 572 KDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIAGEDK--RK 629
Query: 506 QRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFR 561
+RL D L IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L R
Sbjct: 630 KRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVR 689
Query: 562 TKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFH 621
+ +VLVATD+AGRGID+PDV+ VIN++M IE YTHRIGRTGRAGK+GVA TFL
Sbjct: 690 NGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNE 749
Query: 622 DTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
DTDV YDLKQM+++S+ S +P EL KHEA++ KP
Sbjct: 750 DTDVMYDLKQMIMKSSISRLPEELRKHEAAQSKP 783
>sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp28 PE=3 SV=1
Length = 798
Score = 577 bits (1486), Expect = e-163, Method: Compositional matrix adjust.
Identities = 324/701 (46%), Positives = 436/701 (62%), Gaps = 66/701 (9%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQ-------QQLLSQPQTHGRNS 59
E + KP FL++A+RE+LALE+R +++ +R + ++ S P R +
Sbjct: 90 EADAAAAKPKFLSRAERERLALEKRAKEVDADRRLKTERTANGADSSSAQSTPVYPERPN 149
Query: 60 SDSR-DRERERHRREREEEAKARERARLEK---------------------------LAE 91
SD R R R E A++ A K E
Sbjct: 150 SDKRVIPTGPRAMRNTEAPARSGPAATRNKNYDMTPPAPPKPMSFSLTDSKGDSKRQAEE 209
Query: 92 RERERELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHE 147
E ++ LIK++Y+G +K K+ K + +F+F+W EDTS D N LYQ+ HE
Sbjct: 210 DETVAQVALIKQRYMGEEKTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHE 269
Query: 148 AQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE----EAA 203
A +GRG AG LA K + +E++ +EA +++ +E E
Sbjct: 270 ANF-YGRGRLAGFGDDVADSLAKKYAR----------ALEDRDQEAGSIRAREMLEMEKR 318
Query: 204 DLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELL 263
++ ++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L LL
Sbjct: 319 RREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLL 378
Query: 264 RAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--E 321
V+RVGYK P+PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YI+ LP I E
Sbjct: 379 ELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFE 438
Query: 322 ENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVV 381
+ +GPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++
Sbjct: 439 WRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAYSLRNGAEII 498
Query: 382 IATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDE 441
IATPGRL+DC+ERR VL+QC Y+++DEADRMID+GFE V +LDA+P +N KP++++
Sbjct: 499 IATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVTNEKPDSDEA 558
Query: 442 ELD---EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKE 498
E YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V ++
Sbjct: 559 ENSAAMRSHRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAG 618
Query: 499 SEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQRE 554
+K R +RL D L IVFVN K+N D +A+ + +G+ TLHG K+Q+QRE
Sbjct: 619 EDK--RKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKHMGFSSVTLHGSKTQDQRE 676
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
+L R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA
Sbjct: 677 AALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVA 736
Query: 615 TTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 737 ITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 777
>sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum
GN=helB2 PE=2 SV=1
Length = 834
Score = 576 bits (1485), Expect = e-163, Method: Compositional matrix adjust.
Identities = 291/579 (50%), Positives = 387/579 (66%), Gaps = 17/579 (2%)
Query: 91 ERERER-ELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQ 149
+R+RE EL IK Y+G K+ + R EK +F F+W+++EDTS D N LY E Q
Sbjct: 255 KRDREDPELRDIKVDYMGIKRDENRKKIKGEKGKFVFEWDSSEDTSSDYNTLYTKKLEIQ 314
Query: 150 LLFGRG----FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADL 205
FG G + + ++ ++ ++L
Sbjct: 315 PQFGHGNFGGYEKNNNNNGNHYNGNIYNNNNNNNNNNNNNNNINNNNNGSMIGGKQISEL 374
Query: 206 YDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA 265
DT HWS+K L+ MT+RDW IF+EDFNIS KG P P+R W E L E+L A
Sbjct: 375 PDT-------HWSKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQESNLPREILEA 427
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
+ ++GY+ PSPIQM +IP+ L RD++GIAETGSGKT AFV+PML YIS+ P ++++ EA
Sbjct: 428 IRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEA 487
Query: 326 EGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATP 385
+GPYA+VMAPTREL QQIE+ET FA + G +VVS+VGGQSIE+Q +++ +GCE++IATP
Sbjct: 488 DGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATP 547
Query: 386 GRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDE 441
GRL DCLE+RY VLNQCNY+VLDEAD MID+GFEPQV VLDAMPSS LK E+ E +
Sbjct: 548 GRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQ 607
Query: 442 ELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESE 500
E D IYRTT +FSATMPP VE+L++KYLR P +TIG AGK + I Q V+ +K E++
Sbjct: 608 ESDRSHIYRTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSEND 667
Query: 501 KFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
K L +L+ + I+FVN KK+ D++A L++ T LH G+SQEQRE +LEGF
Sbjct: 668 KKEHLTQLIKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGF 727
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
+ ++Y VL+AT VA RGI + V HVIN+D+P NIE YTHRIGRTGRAG G+A++F+T
Sbjct: 728 KKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITD 787
Query: 621 HDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPD 659
D ++ YDLKQ+L +N+ VP EL KH +S+ K G+ D
Sbjct: 788 KDVEIMYDLKQILTSTNNIVPIELLKHPSSQQKHGSSKD 826
>sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp28 PE=3
SV=1
Length = 810
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 324/707 (45%), Positives = 435/707 (61%), Gaps = 69/707 (9%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKR-RQEQQQQLLSQPQTHGRNSS----- 60
E + KP FL+K +RE+LALE+R +++A +R + E + + TH + S
Sbjct: 93 EADAAAAKPKFLSKKEREKLALEKRAQEVAATRRLKSEHASNGVDRSATHSPSVSSEGPN 152
Query: 61 -DSRD---------------------RERERHRREREEEAKARERARLEKLA-------- 90
D+R R + H + + ++ L
Sbjct: 153 GDARSIPTGPRAMRNSDAAPTAPAAMRHSQSHNKNYDLAPPPPPKSMSFGLTSGKGDSRF 212
Query: 91 --ERERERELELIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
E E + L+K++Y+G+ + K+ K + +F+F+W EDTS D N LYQ+
Sbjct: 213 VDEDEAAAQAALVKQRYMGADQTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQH 272
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAAD 204
HE FGRG AG + +A K + + + R+ + A L+ E
Sbjct: 273 RHETNF-FGRGRLAGFGDDVAESVAHKYARALEDRDREAGSIR------AREILEMERRR 325
Query: 205 LYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLR 264
++ ++D+HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L L+
Sbjct: 326 REESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESNLPKRLME 385
Query: 265 AVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--E 322
+ RVGYK P+PIQ AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E
Sbjct: 386 LINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEW 445
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
+A+GPYA+V+APTRELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++I
Sbjct: 446 RKADGPYAIVLAPTRELAQQIEIEAKKFTGPLGFNVVSIVGGHSLEEQAYSLRDGAEIII 505
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP++ED E
Sbjct: 506 ATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDAE 565
Query: 443 ----------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQH 492
D+ R YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q
Sbjct: 566 NPLAMSRHINHDQHR-YRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQR 624
Query: 493 VVMMKESEKFSRLQRLLDELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
V M+ +K R +RL D L IVFVN K+N D +A+ + + G+ TLHG K
Sbjct: 625 VEMIAGEDK--RKKRLGDILSSGEFRAPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSK 682
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+Q+QRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRA
Sbjct: 683 TQDQREAALASVRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRA 742
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
GK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 743 GKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 789
>sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp28 PE=3
SV=1
Length = 783
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 324/695 (46%), Positives = 426/695 (61%), Gaps = 60/695 (8%)
Query: 7 EGGSNNKKPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRE 66
E + KP FL+K +RE++ALE+R +++ Q +R+ + + + DR
Sbjct: 82 EADAAAAKPKFLSKKEREKIALEKRAKEVEQSRRKTSTNGASDTASVRSESATPNGVDRT 141
Query: 67 RE---RHRREREEEAKARERARLEK-----------------LAERERERELELIKEQYL 106
R R EA R R + + E E + L+K++Y+
Sbjct: 142 ASIPTGPRAMRTSEAPPPPRPRHDSSSNGNGNSNSNSNSNGTVDEDEAAAQAALVKQRYM 201
Query: 107 GS--------KKPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRA 158
G+ KK +KR + +F+F+W EDTSRD N LY HEA FGRG A
Sbjct: 202 GAEMTSSFSAKKKRKR----TTDRKFNFEWNAEEDTSRDYNPLYAQRHEANF-FGRGRLA 256
Query: 159 GMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWS 218
G +A K + + R+ V A L+ E ++ ++D+HWS
Sbjct: 257 GFGDDVADGVARKYAAALEDRDREAGSVR------AREILEMERRRREESTRNQLDKHWS 310
Query: 219 EKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQ 278
EKKLE M ERDWRIF+EDFNI+ KG +P PMR+WAE L LL V RVGYK+P+PIQ
Sbjct: 311 EKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWAESGLPSRLLDLVHRVGYKDPTPIQ 370
Query: 279 MAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--EENEAEGPYAVVMAPT 336
AAIP+ +Q RD+IG+A TGSGKTAAF+LP+L YI+ LP I E + +GPYA+V+APT
Sbjct: 371 RAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPT 430
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRY 396
RELAQQIE E KF LG VVSIVGG S+EEQ + +R G E++IATPGRL+DC+ERR
Sbjct: 431 RELAQQIEIEAKKFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRL 490
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRI-------- 448
VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+++ E
Sbjct: 491 LVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAENAAAMSQLHHAGGG 550
Query: 449 ----YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
YR T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V ++ +K R
Sbjct: 551 RDTRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDK--R 608
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D +A+ + + G+ TLHG K+QEQRE +L
Sbjct: 609 KKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASV 668
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL
Sbjct: 669 RNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGN 728
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQMLI+S S VP EL KHEA++ KP
Sbjct: 729 EDADVMYDLKQMLIKSPISRVPDELRKHEAAQQKP 763
>sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=prp28 PE=3 SV=1
Length = 796
Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/569 (52%), Positives = 385/569 (67%), Gaps = 23/569 (4%)
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
LIK++Y+G++K K+ K + +F+F+W EDTS D N LYQ HEA +GRG
Sbjct: 216 LIKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANF-YGRG 274
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AG LA K + + + R+ + A L+ E ++ ++D+
Sbjct: 275 RLAGFGDDVADTLAQKYARALEDRDREAGSIR------AREILEMERRRREESTRNQLDK 328
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L LL V++VGYK P+
Sbjct: 329 HWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPT 388
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--EENEAEGPYAVVM 333
PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YIS LP I E + +GPYA+V+
Sbjct: 389 PIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVL 448
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+E
Sbjct: 449 APTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIE 508
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---KRIYR 450
RR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ E+ E YR
Sbjct: 509 RRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSHRYR 568
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD 510
T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ +K R +RL D
Sbjct: 569 QTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDK--RKKRLAD 626
Query: 511 ELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
L IVFVN K+N D +A+ + ++G+ TLHG K+QEQRE +L R +
Sbjct: 627 ILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTD 686
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL D DV
Sbjct: 687 VLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVM 746
Query: 627 YDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YDLKQML++S S VP EL KHEA++ KP
Sbjct: 747 YDLKQMLMKSPISRVPEELRKHEAAQSKP 775
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 7/50 (14%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSR 63
KP FL+KA+RE++ALE+R +++ E ++ S+P T+G + S ++
Sbjct: 97 KPKFLSKAERERIALEKRAKEV-------EAGRRFKSEPSTNGTDRSGTQ 139
>sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=PRP28 PE=3 SV=1
Length = 746
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/671 (47%), Positives = 426/671 (63%), Gaps = 41/671 (6%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQTHGRNSSDSRDRERERHRRE 73
KP FL+KA+RE++ALE+R++++ + +RR+E + G + S R R
Sbjct: 79 KPKFLSKAERERIALEKRRKEVEEAQRRREGSNSSTNGASHKGHYDASSSIPTGPRAMRP 138
Query: 74 REEEAKARERARL-----------EKLAERE--RERELELIKEQYLGSKKPKKRV----- 115
+ R +K +R + E +I+++Y+G+++ +
Sbjct: 139 EAPSGPPSRQQRSNGDMAPPPLPDKKTGKRPPPEDAEAAMIRQRYMGAEQNQSTFSAKKK 198
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKE 175
K + + +F+F+W EDTS D N +YQ EA G + + + ++
Sbjct: 199 RKRTTEKKFNFEWNEEEDTSYDYNPIYQQKAEAGFF-----GRGRLGGFTEDVTEQGTQK 253
Query: 176 MREEIRKKEGVEEKPEEAAALKL----KEEAADLYDTFDMRVDRHWSEKKLEEMTERDWR 231
E + +++ V + L + KEE ++D+HWSEKKLE M ERDWR
Sbjct: 254 FIEAMIERDPVSGRERAERILDMERRRKEEGGR------AQLDKHWSEKKLEHMRERDWR 307
Query: 232 IFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDV 291
IF+EDFNI+ KG IP PMRNW E L ++LR VE VGY PS +Q AAIP+ LQ RD+
Sbjct: 308 IFKEDFNIATKGGAIPNPMRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDL 367
Query: 292 IGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 351
IG+A TGSGKTA+FVLP+L YIS+LPP+ N A+GPYA+V+APTRELAQQIE ET KFA
Sbjct: 368 IGVAVTGSGKTASFVLPLLVYISQLPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFA 427
Query: 352 HYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEAD 411
LG IVGG SIEEQ F++R G E+VIATPGRL+DC+ERR VL+QC YV++DEAD
Sbjct: 428 APLGFNTAVIVGGHSIEEQAFQMRDGAEIVIATPGRLVDCIERRMLVLSQCTYVIMDEAD 487
Query: 412 RMIDMGFEPQVVGVLDAMPSSNLKPEN---EDEELDEKRIYRTTYMFSATMPPAVERLAR 468
RMIDMGFE V +LDA+P +N KP++ ED ++ +YR T M++ATMP AVER+AR
Sbjct: 488 RMIDMGFEEPVNKILDALPVTNEKPDSDAAEDPNAMKRGMYRQTMMYTATMPTAVERIAR 547
Query: 469 KYLRNPVVVTIGTAGKATELISQHVVMMKESEK-FSRLQRLLDELGDKTA--IVFVNTKK 525
KYLR P +VTIG G+A E + Q V ++ EK RLQ +L+ G+ T IVFVN K+
Sbjct: 548 KYLRRPAIVTIGNVGEAVETVEQRVEHIQGEEKRKKRLQEILNS-GEFTPPIIVFVNIKR 606
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
N D +A+++ +G+ TLHG K+QEQRE +L R R +VLVATD+AGRGIDI DV+
Sbjct: 607 NCDAIARDIKNMGFSSVTLHGSKTQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSL 666
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPEL 644
V+N++M +IE YTHRIGRTGRAGK+GVA TF D DV YDLKQML +S S VP +L
Sbjct: 667 VVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLYDLKQMLTKSQISKVPEDL 726
Query: 645 AKHEASKFKPG 655
KHEA++ K G
Sbjct: 727 RKHEAAQQKGG 737
>sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp28 PE=3 SV=1
Length = 796
Score = 568 bits (1465), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/569 (52%), Positives = 385/569 (67%), Gaps = 23/569 (4%)
Query: 100 LIKEQYLGSKKPK----KRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGRG 155
LIK++Y+G++K K+ K + +F+F+W EDTS D N LYQ HEA +GRG
Sbjct: 216 LIKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANF-YGRG 274
Query: 156 FRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDR 215
AG LA K + + + R+ + A L+ E ++ ++D+
Sbjct: 275 RLAGFGDDVADTLAQKYARALEDRDREAGSIR------AREILEMERRRREESTRNQLDK 328
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWSEKKLE M ERDWRIF+EDFNIS KG +P PMR+W E L LL V++VGYK P+
Sbjct: 329 HWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPT 388
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS--EENEAEGPYAVVM 333
PIQ AAIP+ LQ RD+IG+A TGSGKTA+F+LP+L YIS LP I E + +GPYA+V+
Sbjct: 389 PIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVL 448
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELAQQIE E KF LG VVSIVGG S EEQ + +R G E++IATPGRL+DC+E
Sbjct: 449 APTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIE 508
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDE---KRIYR 450
RR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ E+ E YR
Sbjct: 509 RRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAMRSHRYR 568
Query: 451 TTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD 510
T M++ATMP AVER+ARKYLR P +VTIG+AG+A + + Q V M+ +K R +RL D
Sbjct: 569 QTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDK--RKKRLAD 626
Query: 511 ELGD----KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYN 566
L IVFVN K+N D +A+ + ++G+ TLHG K+QEQRE +L R +
Sbjct: 627 ILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTD 686
Query: 567 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVF 626
VLVATD+AGRGID+PDV+ V+N++M +IE YTHRIGRTGRAGK+GVA TFL D DV
Sbjct: 687 VLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVM 746
Query: 627 YDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YDLKQML++S S VP EL KHEA++ KP
Sbjct: 747 YDLKQMLMKSPISRVPEELRKHEAAQSKP 775
>sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides
immitis (strain RS) GN=PRP28 PE=3 SV=2
Length = 820
Score = 567 bits (1460), Expect = e-160, Method: Compositional matrix adjust.
Identities = 297/575 (51%), Positives = 387/575 (67%), Gaps = 30/575 (5%)
Query: 100 LIKEQYLGSKK-----PKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQNPHEAQLLFGR 154
L +++Y+G+ + KK+ + +E+ +F+F+W EDTS D N LYQN E FGR
Sbjct: 232 LTRQRYMGADQTSSFSAKKKRRRTTER-KFNFEWNADEDTSPDYNPLYQNRSEMNF-FGR 289
Query: 155 GFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVD 214
G AG A + K + E R E + E ++ + + D+
Sbjct: 290 GRLAGFSDDVVDSAAKRYAKAL--EDRDLEAGSARAREILEMERRRREEGGRNGLDL--- 344
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
HWS+K+L++M ERDWRIF+EDFNIS KG IP PMR+W E L LL +++VGYK+P
Sbjct: 345 -HWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDP 403
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISE--ENEAEGPYAVV 332
SPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YI+ LP + E +++GPYA++
Sbjct: 404 SPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAII 463
Query: 333 MAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL 392
+APTRELAQQIE E KF + LG VVSIVGG S+EEQ F +R G E++IATPGRL+DC+
Sbjct: 464 LAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCI 523
Query: 393 ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LD 444
ERR VL+QC YV++DEADRMID+GFE V +LDA+P SN KP+ E+ E L
Sbjct: 524 ERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLG 583
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSR 504
K YR T M++ATMP AVER+ARKYLR P +VTIG G+A + + Q V + +K R
Sbjct: 584 GKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDK--R 641
Query: 505 LQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGF 560
+RL D L IVFVN K+N D VA+++ ++GY TLHG K+QEQRE +L
Sbjct: 642 KKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASV 701
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTF 620
R +VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+GVA TFL
Sbjct: 702 RNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGN 761
Query: 621 HDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 762 EDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 796
Score = 35.8 bits (81), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 5 VDEGGSNNKKPLFLTKAQREQLALERRQEQIAQQKR 40
DE S +P FLTK+QRE+LALE+R ++I ++R
Sbjct: 103 ADEAAS---RPKFLTKSQREKLALEKRAKEIEHERR 135
>sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp28 PE=3 SV=1
Length = 783
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/689 (45%), Positives = 422/689 (61%), Gaps = 84/689 (12%)
Query: 17 FLTKAQREQLALERRQEQIAQQKRRQE-QQQQLLSQPQTHGR--------NSSDSRDR-- 65
FL+KA RE+LALE R +++ +QKR++E +Q +S +G N D +R
Sbjct: 104 FLSKAAREKLALETRAKEVEEQKRKREAEQDNRISIGSVNGNGNGYGSAANGPDGYERSY 163
Query: 66 ERERHRRER---------------------------------EEEAKARERARL--EKLA 90
++E RRE + A +A + EK
Sbjct: 164 QQENGRRESSFVPTGPRAMRNSQQSRSSSDKPNDMEPPPKPAKSAAAGTGKASVAGEKRP 223
Query: 91 ERERERELELIKEQYLGSK------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN 144
+ + LIK +Y+G++ KK+ + +EK +F+F+W EDTS D N +YQN
Sbjct: 224 ANAEDLQAALIKTRYMGAETNQSTFSAKKKRRRTTEK-KFNFEWNAEEDTSPDYNPIYQN 282
Query: 145 PHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKE---- 200
EA + R + A++E ++ + +EE+ EA + +E
Sbjct: 283 RAEAG----------LYGRGRLGGFAEDEGAT---LKYAKALEERDAEAGGARAREIVEM 329
Query: 201 EAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP 260
E D +D+HWSEKKLE M ERDWRIF+EDFNIS KG IP PMRNW+E KL
Sbjct: 330 ERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNWSESKLPK 389
Query: 261 ELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPIS 320
LL + +VGY PS +Q AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP++
Sbjct: 390 RLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLN 449
Query: 321 EENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEV 380
E + +GPYA+++APTRELAQQIE E KFA LG VSIVGG S+EEQ + +R G E+
Sbjct: 450 EFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEI 509
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
+IATPGRL+DC+ERR VL QC Y+++DEADRMID+GFE V +LDA+P SN KP+ +D
Sbjct: 510 IIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDD 569
Query: 441 EE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQH 492
E L K YR T M++ATMPPAVE++A+KYLR P +VTIG G+A E + Q
Sbjct: 570 AEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQR 629
Query: 493 VVMMKESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGK 548
V + +K R +RL + L IVFVN K+N D VA+++ +G+ TLHG K
Sbjct: 630 VEFVAGEDK--RKKRLNEILASGEFAPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSK 687
Query: 549 SQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 608
+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRA
Sbjct: 688 TQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRA 747
Query: 609 GKTGVATTFLTFHDTDVFYDLKQMLIQSN 637
GK+GVA TFL D+D YDLKQML +S+
Sbjct: 748 GKSGVAITFLGNEDSDTMYDLKQMLTKSS 776
>sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP28 PE=3 SV=1
Length = 705
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 301/611 (49%), Positives = 397/611 (64%), Gaps = 44/611 (7%)
Query: 69 RHRREREEEAKARERARL----EKLAERERERELELIKEQYLG---------SKKPKKRV 115
RH + E +R RL EK AE ER+ EL + +Y+G +KK +KR
Sbjct: 92 RHPGDSGEPEHGGKRRRLNDNDEKRAEMERKDAAEL-RAKYMGPEVNQSTFSAKKKRKR- 149
Query: 116 IKPSEKFRFSFDWENTEDTSRDMNALY-QNPHEAQLLFGRGFRAGMDRREQKKLAAKNEK 174
+ +F+FDW+ +DTSR + +Y + P L G + R+ + + + +
Sbjct: 150 ---TAANKFNFDWDPEDDTSRPFDPVYAERPESLVRLAGYENTDELVLRKAEAIRRGDPE 206
Query: 175 EMREEIRKKEGVEEKPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFR 234
E RK E+ ++AA K +HWSEKKLE+M ERDWRIF+
Sbjct: 207 TGEERARKLLEQHERVKQAAERK--------------NFGKHWSEKKLEDMKERDWRIFK 252
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
E+F I+ KG IP PMR+WAE L LL VE VGY P+PIQ AAIP+ Q RD+IG+
Sbjct: 253 ENFGIATKGGAIPNPMRSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGV 312
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYL 354
A TGSGKTAAF+LP+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KFA L
Sbjct: 313 AVTGSGKTAAFLLPLLVYISELPPLTEFNKNDGPYALILAPTRELVQQIETEARKFAGPL 372
Query: 355 GIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 414
G VVSIVGG S+EEQ F +R G E+++ATPGRL+DCLERR V +QC Y+++DEADRMI
Sbjct: 373 GFTVVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYIIMDEADRMI 432
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERL 466
D GFE + +LDA+P +N KP+ ED E L K YR T M++ATMPP VE++
Sbjct: 433 DQGFEEPLTKILDALPVANEKPDTEDAENSQLMSRYLGGKDRYRQTMMYTATMPPLVEKI 492
Query: 467 ARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDK-TAIVFVNTK 524
A+KYLR P +VTIG AG+A + + Q V + E ++ RLQ +L+ K IVFVN K
Sbjct: 493 AKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDKRKRRLQEILNSGQFKPPVIVFVNIK 552
Query: 525 KNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVA 584
+N +MVAK++ GY TLHG K+QEQRE SL R + N+LVATD+AGRGID+ DV+
Sbjct: 553 RNCEMVAKDIKSWGYSTVTLHGSKTQEQREASLASVRNGQANILVATDLAGRGIDVADVS 612
Query: 585 HVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPE 643
V+N++MP +IE YTHRIGRTGRAGK+GVA TFL D+DV YDLKQ++ +S+ S VP E
Sbjct: 613 LVVNFNMPSSIEAYTHRIGRTGRAGKSGVAITFLGNEDSDVMYDLKQIISKSSISKVPEE 672
Query: 644 LAKHEASKFKP 654
L +HEA++ KP
Sbjct: 673 LRRHEAAQSKP 683
>sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-28 PE=3 SV=1
Length = 728
Score = 553 bits (1424), Expect = e-156, Method: Compositional matrix adjust.
Identities = 298/598 (49%), Positives = 388/598 (64%), Gaps = 58/598 (9%)
Query: 87 EKLAERERERELELIKEQYLG--------SKKPKKRVIKPSEKFRFSFDWENTEDTSRDM 138
EK A+ ER E EL + +Y+G S K K+R + +F+FDW+ +DTSR
Sbjct: 138 EKRAKMERNDEAEL-RARYMGPVVNQSTFSAKKKRRRTAAN---KFNFDWDADDDTSRPF 193
Query: 139 NALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEI--RKKEGVEEKPEEAAAL 196
+ +Y E + G G+ EM EE+ RK E + E
Sbjct: 194 DPIYAERQEPLVRLG-GY------------------EMTEEMVMRKAEAIRRGDPETG-- 232
Query: 197 KLKEEAADLYDTFDMRV---------DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIP 247
EE A Y R+ +HWSEKKLE+M ERDWRIF+E+F I+ KG IP
Sbjct: 233 ---EERARQYLEQHRRIKEMEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIP 289
Query: 248 RPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVL 307
PMR+W E L LL V+ VGY P+PIQ AAIP+ LQ RD+IG+A TGSGKTAAF+L
Sbjct: 290 NPMRSWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLL 349
Query: 308 PMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSI 367
P+L YIS LPP++E N+ +GPYA+++APTREL QQIE E KFA LG VVSIVGG S+
Sbjct: 350 PLLVYISELPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVVSIVGGHSL 409
Query: 368 EEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLD 427
EEQ F +R G E+++ATPGRL+DCLERR V +QC Y ++DEADRMID GFE + +LD
Sbjct: 410 EEQAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILD 469
Query: 428 AMPSSNLKPENEDEE--------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTI 479
AMP +N KP+ +D E +D K YR T M++ATMPP VER+A+KYLR P +VTI
Sbjct: 470 AMPVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPIVERIAKKYLRRPAIVTI 529
Query: 480 GTAGKATELISQHVVMMK-ESEKFSRLQRLLDELGDKTA-IVFVNTKKNADMVAKNLDKL 537
G AG+A + + Q V + E ++ RLQ +L+ K IVFVN K+N DMVA+++ +
Sbjct: 530 GNAGEAVDTVEQRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVNIKRNCDMVARDIKGM 589
Query: 538 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 597
GY TLHG K+QEQRE +L R + ++LVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 590 GYSAVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIES 649
Query: 598 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
YTHRIGRTGRAGK+GVA TFL D DV YDL+Q++ +S+ S VP EL +HEA++ KP
Sbjct: 650 YTHRIGRTGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKP 707
>sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP28 PE=3 SV=1
Length = 721
Score = 551 bits (1421), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/583 (50%), Positives = 389/583 (66%), Gaps = 35/583 (6%)
Query: 97 ELELIKEQYLGSK-------KPKKRVIKPSEKFRFSFDWENTEDTSRDMNALYQN----P 145
E L++ +YLG + KK+ ++ +EK +F+F+W+ EDTSRD + LY
Sbjct: 130 EATLLRSRYLGPQVNQQSNFSAKKKRMRTTEK-KFNFEWDADEDTSRDNDPLYDRQTAVS 188
Query: 146 HEAQLL-FGRGFRAGMDRREQK--KLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEA 202
H G F G + R +K K+ A+ + E +E + EG+ E + +++A
Sbjct: 189 HNGSFAGIGGEFDDGAEERARKRAKMIAQRDPENGKE--RAEGIMED-----FFRARDKA 241
Query: 203 ADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPEL 262
D + +HWSEK L++M ERDWRIF+EDF I+ KG IP PMR+W E L L
Sbjct: 242 RQRADRRGL--GKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSWQESNLPQRL 299
Query: 263 LRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEE 322
L V+ VGYK+PSPIQ AAIP+ LQ RD+IG+A TGSGKTAAF+LP+L YIS LPP+ E
Sbjct: 300 LNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEI 359
Query: 323 NEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVI 382
N+ +GPYA++MAPTREL QQIE E KFA LG +VVSIVGG IEEQ + +R G E+V+
Sbjct: 360 NKHDGPYALIMAPTRELVQQIETEARKFAGPLGFRVVSIVGGHQIEEQAYNLRDGAEIVV 419
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRL+DC+ERR VL+QC YV++DEADRMID+GFE V +LDA+P +N KP+ ++ E
Sbjct: 420 ATPGRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAE 479
Query: 443 --------LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV- 493
L + YR T M++ATMPP VER+A+KYLR P +VTIG AG+A + + Q V
Sbjct: 480 NAQIMQRYLGGRDRYRQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVE 539
Query: 494 VMMKESEKFSRLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ E + RLQ +L IVFVN K+N D VA+++ ++G+ TLHG K+QEQ
Sbjct: 540 FVSGEDRRKKRLQEILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQ 599
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +L R VLVATD+AGRGID+PDV+ V+N++M NIE YTHRIGRTGRAGK+G
Sbjct: 600 REAALGSVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSG 659
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
VA TFL D + YDLKQ+L +S+ S VP EL +HEA++ KP
Sbjct: 660 VAITFLGPEDHETMYDLKQILSKSSISKVPEELRRHEAAQSKP 702
>sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicase prp28
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp28 PE=3 SV=1
Length = 662
Score = 535 bits (1378), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/652 (45%), Positives = 414/652 (63%), Gaps = 25/652 (3%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQLLSQPQ--THGRNSSDSRDRERERHR 71
+P FL+KA+R +LALERRQ+++ + K +Q + L + H N+ + D ++ +
Sbjct: 26 RPKFLSKAERARLALERRQKEVEEAKAKQNDKLLDLRKRTFTNHLENNELADDEKKSQVS 85
Query: 72 REREEEAKARERARLEKLAERERERELELIKEQYLGSKKPKKRVIKPSEKFRFSFDWENT 131
+ A E + R+R Y+G K P + + + +F FDW+ T
Sbjct: 86 SVSSNNSGTESSATDEAFSMTIRQR--------YMGIKPPVVKKRRRNADKKFVFDWDAT 137
Query: 132 EDTSRDMNALYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPE 191
+DT +D +P +FGRG G D + +K AK+ + + R +G E+
Sbjct: 138 DDTMKDAET-SASPEATIAVFGRGKLGGFDDQSIRK--AKSNSGLIQ--RLLQGTEQDKA 192
Query: 192 EAAAL-KLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPM 250
A L +L+E+ A D D+ W EK LE M RDWRI +ED+NIS KG +P P+
Sbjct: 193 RAHELIQLQEKRAKKIDWDDV----PWREKPLEAMKPRDWRILKEDYNISIKGDDLPNPL 248
Query: 251 RNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 310
RNW E L E+L+ +++V YK PS IQ AAIP+ LQ++D+IGIAETGSGKTAAF++P++
Sbjct: 249 RNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLI 308
Query: 311 TYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQ 370
IS+LPP++E N GPYAVV+APTRELAQQI+ E KFA LG + VS+VGG + EEQ
Sbjct: 309 IAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGGHAFEEQ 368
Query: 371 GFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMP 430
F++ QG +V+ATPGRL+DCLERR VL+QC YVV+DEADRM+DMGFE V +L ++P
Sbjct: 369 SFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLP 428
Query: 431 SSNLKPENED--EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATEL 488
SSN ++ + R T MFSAT+PP V LA+ YL PV++TIG G+A +
Sbjct: 429 SSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDR 488
Query: 489 ISQHVVMMK-ESEKFSRLQRLLDE-LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHG 546
+ Q V M+ +S+K+ R++ +L+ I+FVN K+N + +AK L+ +G+ TLHG
Sbjct: 489 VEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHG 548
Query: 547 GKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTG 606
KSQEQRE ++E R K ++LVATD+AGRGIDIP+V+ V+NY+M +IE YTHRIGRTG
Sbjct: 549 SKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTG 608
Query: 607 RAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPGTI 657
RAGK+G A TFL DTDV+YDL+ +L +S + +P EL HEA+ + I
Sbjct: 609 RAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPDELRNHEAAFVRHAAI 660
>sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP28 PE=3 SV=1
Length = 738
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/570 (49%), Positives = 377/570 (66%), Gaps = 44/570 (7%)
Query: 97 ELELIKEQYLG----SKKPKKRVIKPSEKFRFSFDWENTEDTSR-DMNALYQNPHE---A 148
ELE ++ +YLG KKP+ ++ ++ + FDW +DTS D ++ + E
Sbjct: 182 ELEALRARYLGKRTDGKKPR---LRKAQDKKIIFDWNEQDDTSAADQSSWTREVRELVPG 238
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
+FG G AGMD ++ + + N + E R A+K K++
Sbjct: 239 GTMFG-GRLAGMDGAKKNETRSDNHADPLERRR-------------AVKGKDD------- 277
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
DRHWS+K L+EM ERDWRIFREDF+I+ +G IP P+RNW E + ++L +E
Sbjct: 278 -----DRHWSDKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEE 332
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+GYK PSPIQ AIP+G+Q RD+IG+A+TGSGKTAAFV+PML YI LPP++++N GP
Sbjct: 333 IGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGP 392
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA++MAPTRELAQQIE ET +FA LG K VSIVGG+S+EEQ F +R G E++IATPGRL
Sbjct: 393 YALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRL 452
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDEELD 444
D +++ V++QC YVV+DEADRM+D+GFE + +LD+MP++ +KP++ + +
Sbjct: 453 KDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEG 512
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-KFS 503
E + +R T +FSATMPPAVERLARKYL P V IG AG+A + + Q V + E K +
Sbjct: 513 EWQGWRVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKA 572
Query: 504 RLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RL +L +G IVFVN KK ADMV K + + G TLH GKSQEQRE +L+ R
Sbjct: 573 RLIEILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRD 632
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+VLVATD+AGRGID+PDV+ VIN+ M IE Y HRIGRTGRAGKTGVA TFLT D
Sbjct: 633 GEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDD 692
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+V YDL+ + +S S + PELA+HEA++
Sbjct: 693 DEVMYDLRIEVEKSKMSKMNPELARHEAAR 722
Score = 36.6 bits (83), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 29/34 (85%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ 47
KP FL+KA+R+++ALE+RQ ++ +Q+ R++ +++
Sbjct: 23 KPKFLSKAERQKIALEKRQSEVREQQEREDAERR 56
>sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP28 PE=3 SV=1
Length = 738
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 281/570 (49%), Positives = 377/570 (66%), Gaps = 44/570 (7%)
Query: 97 ELELIKEQYLG----SKKPKKRVIKPSEKFRFSFDWENTEDTSR-DMNALYQNPHE---A 148
ELE ++ +YLG KKP+ ++ ++ + FDW +DTS D ++ + E
Sbjct: 182 ELEALRARYLGKRTDGKKPR---LRKAQDKKIIFDWNEQDDTSAADQSSWTREVRELVPG 238
Query: 149 QLLFGRGFRAGMDRREQKKLAAKNEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLYDT 208
+FG G AGMD ++ + + N + E R A+K K++
Sbjct: 239 GTMFG-GRLAGMDGAKKNETRSDNHADPLERRR-------------AVKGKDD------- 277
Query: 209 FDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVER 268
DRHWS+K L+EM ERDWRIFREDF+I+ +G IP P+RNW E + ++L +E
Sbjct: 278 -----DRHWSDKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESAIPSQILDIIEE 332
Query: 269 VGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGP 328
+GYK PSPIQ AIP+G+Q RD+IG+A+TGSGKTAAFV+PML YI LPP++++N GP
Sbjct: 333 IGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGP 392
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRL 388
YA++MAPTRELAQQIE ET +FA LG K VSIVGG+S+EEQ F +R G E++IATPGRL
Sbjct: 393 YALIMAPTRELAQQIETETRRFALPLGYKCVSIVGGRSVEEQQFALRDGAEIIIATPGRL 452
Query: 389 IDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPEN----EDEELD 444
D +++ V++QC YVV+DEADRM+D+GFE + +LD+MP++ +KP++ + +
Sbjct: 453 KDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEG 512
Query: 445 EKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-KFS 503
E + +R T +FSATMPPAVERLARKYL P V IG AG+A + + Q V + E K +
Sbjct: 513 EWQGWRVTTLFSATMPPAVERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKKKA 572
Query: 504 RLQRLLDELG-DKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRT 562
RL +L +G IVFVN KK ADMV K + + G TLH GKSQEQRE +L+ R
Sbjct: 573 RLIEILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRD 632
Query: 563 KRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHD 622
+VLVATD+AGRGID+PDV+ VIN+ M IE Y HRIGRTGRAGKTGVA TFLT D
Sbjct: 633 GEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDD 692
Query: 623 TDVFYDLKQMLIQSN-SPVPPELAKHEASK 651
+V YDL+ + +S S + PELA+HEA++
Sbjct: 693 DEVMYDLRIEVEKSKMSKMNPELARHEAAR 722
Score = 36.6 bits (83), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 29/34 (85%)
Query: 14 KPLFLTKAQREQLALERRQEQIAQQKRRQEQQQQ 47
KP FL+KA+R+++ALE+RQ ++ +Q+ R++ +++
Sbjct: 23 KPKFLSKAERQKIALEKRQSEVREQQEREDAERR 56
>sp|A4RK80|PRP28_MAGO7 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=PRP28 PE=3 SV=1
Length = 674
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/450 (53%), Positives = 318/450 (70%), Gaps = 12/450 (2%)
Query: 217 WSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSP 276
W +K+L +MT RDWR+F+ + I KG+ IP PMR W E L L +++VGY P+P
Sbjct: 223 WQDKELSQMTTRDWRLFKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTP 282
Query: 277 IQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPT 336
+Q AAIP+ LQ RD+IGI++TGSGKTAAFVLPML+YI LPP++E + EGPYA+++APT
Sbjct: 283 VQRAAIPIALQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTEGPYALILAPT 342
Query: 337 RELAQQIEEETVKFAHYLGIKVVSIVGGQ-SIEEQGFRIRQGCEVVIATPGRLIDCLERR 395
RELA QI+ E +KFA +G VV ++G + +IEE F +R G E+++ATPGRL+DCLER
Sbjct: 343 RELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERH 402
Query: 396 YAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE--------LDEKR 447
VL+QC+YVVLDEADRM+D GFE + +L A+P SN KP++ D E L
Sbjct: 403 LLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNL 462
Query: 448 IYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV-MMKESEKFSRLQ 506
YR T M+SATMPP+VER+A+ YL++P +VTIGT G+A + + Q + ++ E E+ ++L+
Sbjct: 463 RYRQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLR 522
Query: 507 RLLDELGD-KTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRY 565
+L+ G K IVFVNTK N D VAK+L + TLHG K+Q+QRE +L+ FR R
Sbjct: 523 AMLNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRT 582
Query: 566 NVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDV 625
NVLVATDVA RG+DIPDV+ VIN++M G IE+YTHRIGRTGRAGK G+A TF D V
Sbjct: 583 NVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGV 642
Query: 626 FYDLKQMLIQSN-SPVPPELAKHEASKFKP 654
Y LKQ++ +S S VPP L H ++ KP
Sbjct: 643 LYHLKQIMSKSQMSKVPPWLKDHPEAQSKP 672
>sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP28 PE=3 SV=1
Length = 575
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 236/450 (52%), Positives = 323/450 (71%), Gaps = 12/450 (2%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGS-KIPRPMRNWAEGKLTPELLR-AVERVGY 271
D HWS+K +E MT RDWRIF+ED++I KG IP P+R+W E K P ++R + R+GY
Sbjct: 124 DAHWSDKPVESMTSRDWRIFKEDYSIVTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGY 183
Query: 272 KNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAV 331
K P+PIQ AAIP+ L RDVIG+AETGSGKTA+F++P+++YI LP + E ++ GPY +
Sbjct: 184 KEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGL 243
Query: 332 VMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDC 391
++APTRELA QI++E VKF LG KVVS+VGG S +EQ +++G E+++ATPGRL+D
Sbjct: 244 ILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDV 303
Query: 392 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE---LDEKRI 448
++RR VLNQC YVV+DEADRM+DMGFE QV VL ++PSSN KP++++ E R
Sbjct: 304 IDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAVSTRR 363
Query: 449 YRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRL 508
YR T M++ATMP A+E+LA+KYLR P +VTIG+AG+A ++Q V + EK R +RL
Sbjct: 364 YRQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLNTDEK--RKRRL 421
Query: 509 LDELGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKR 564
LD + + +VF+N K++ + V+ L G+R +HGGK QEQRE +++ +
Sbjct: 422 LDIISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGA 481
Query: 565 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTD 624
+VLVATDVAGRG+DIP+V+ V+N+ M NIE YTHRIGRTGRAGK G A TFL D D
Sbjct: 482 VDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTFLGQEDDD 541
Query: 625 VFYDLKQMLIQSN-SPVPPELAKHEASKFK 653
V ++LKQM+ +S SP EL++H A++ K
Sbjct: 542 VLFELKQMISRSEASPNNQELSRHPAARMK 571
>sp|A3LNL1|PRP28_PICST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PRP28 PE=3 SV=2
Length = 482
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/466 (43%), Positives = 287/466 (61%), Gaps = 22/466 (4%)
Query: 207 DTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA- 265
D D HWSEK L++MT RDWRIFRED+ I+ KG I P+R W E + +LL
Sbjct: 12 DNIDFVETTHWSEKSLDQMTARDWRIFREDYGITSKGGDIDNPLRTWNEASIPSKLLSII 71
Query: 266 VERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA 325
V+++ Y P+PIQ AAIPL L QRDV+GIAETGSGKT AF++P+L+YI E E
Sbjct: 72 VDKLEYLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYEH 131
Query: 326 E------GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCE 379
+ P +++APTRELAQQI +E KF LG+ VVSI+GG EE IR G
Sbjct: 132 QQEQNYNKPLGLILAPTRELAQQITKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGVH 191
Query: 380 VVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENE 439
VV+ATPGRL+D LER L++C Y+++DEADRMIDMGFE + +L +PS++
Sbjct: 192 VVVATPGRLVDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNSTI 251
Query: 440 DEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-- 497
D + + R T MF+AT+ P +E++ + +L P + IG AG+A + I Q+ +
Sbjct: 252 DSMIFHIK-KRITLMFTATISPPIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSA 310
Query: 498 -------ESEKFSRLQRLLDELGDK----TAIVFVNTKKNADMVAKNLDKLGYR-VTTLH 545
+S++F +L R++ + + + I+F N K+ D+++ L+K G+R +H
Sbjct: 311 TGGSEDFDSKRFDKLVRIIQQHSRESRQFSIIIFANYKRVCDLLSLELEKNGFRDNVVIH 370
Query: 546 GGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRT 605
G K+QE RE ++ FR+ +L+ATDVA RGID+P+V+ V+N+ M + Y HRIGRT
Sbjct: 371 GSKTQELREKAISSFRSHESRILIATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRT 430
Query: 606 GRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
GRAG G + TF+ D+DVF DLK+ L+ P L KH +++
Sbjct: 431 GRAGNRGESYTFIDDSDSDVFIDLKKFLVNGGKKCPDWLIKHASTQ 476
>sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP28 PE=3 SV=2
Length = 575
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/455 (42%), Positives = 283/455 (62%), Gaps = 23/455 (5%)
Query: 216 HWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPS 275
HWS+KKLE+MT RDWRIF+EDF+I+ KG+ IP P+R+W E + LL ++++GYK P+
Sbjct: 115 HWSDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSWKESGIPTTLLNTIDQLGYKEPT 174
Query: 276 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP------ISEENEAEGPY 329
PIQ AAIP L RDV+GIAETGSGKT AF++P+L+Y+S + +E+
Sbjct: 175 PIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAIDKDYMEVEHKQESNLNKVL 234
Query: 330 AVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLI 389
+V+APTRELA QI +E KFA LG VV+I+GG EE ++ G +V+ATPGRLI
Sbjct: 235 GLVLAPTRELALQISKEAKKFASVLGYNVVTIIGGHQYEETVKSVQDGAHIVVATPGRLI 294
Query: 390 DCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIY 449
D E+ L+QC ++ +DEADRMIDMGFE + +L +PS++ D + + +
Sbjct: 295 DSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTSSSGFGLDSTIFKVK-S 353
Query: 450 RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM------------- 496
R T MF+AT+ P +E++ + YL+ P + IG AG+ + I+Q +
Sbjct: 354 RITLMFTATISPPIEKITKDYLQTPAYLYIGDAGEIVDNINQKFEYLGDNVDSQEELNAP 413
Query: 497 KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLD--KLGYRVTTLHGGKSQEQRE 554
+ ++ S L++ + E I+F N K+ ++++ L +G + +HG KSQE RE
Sbjct: 414 RTNKMISALRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVGSNI-VIHGSKSQEARE 472
Query: 555 ISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVA 614
++ FR + NVL+ATDVA RGIDIP+V+ V+NY MP + Y HRIGRTGRAGK+G +
Sbjct: 473 SAIASFREHKVNVLIATDVAARGIDIPNVSLVVNYHMPKRFDEYIHRIGRTGRAGKSGAS 532
Query: 615 TTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
+F+ D+++ +LK L + +P L +H A
Sbjct: 533 LSFVDDGDSEILVNLKSFLSKGTKRLPDWLLRHPA 567
>sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PRP28 PE=3 SV=2
Length = 580
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/462 (42%), Positives = 280/462 (60%), Gaps = 28/462 (6%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRA-VERVGYK 272
D HWSEK++++MT RDWRIF+ED+NI+ KG I P+R WAE KL +LL ++ +GY
Sbjct: 117 DMHWSEKQIDDMTTRDWRIFKEDYNITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYD 176
Query: 273 NPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISR------LPPISEENEAE 326
+P+PIQ A+IPL L RD++GIAETGSGKT AF+LP+ +YI L +E+
Sbjct: 177 SPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFN 236
Query: 327 GPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPG 386
P +++APTRELA QI +E F L + VV+I+GG EE +R G +V+ATPG
Sbjct: 237 KPLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPG 296
Query: 387 RLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEK 446
RLID LER L+ C + +DEAD+MIDMGFE + +L+ +P+S E + +D K
Sbjct: 297 RLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYLPAS----EKLETTIDGK 352
Query: 447 RIY---RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMM------- 496
R T MF+AT+ P +E++ + YL P + IG G+A + I+Q
Sbjct: 353 IFNIKKRITLMFTATISPPIEKITKNYLMKPGYLFIGNVGEAVDNINQQFEYFGARQSSD 412
Query: 497 ------KESEKFSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDKLGYR-VTTLHGGKS 549
K + FS L+ DE + + I+F N KK + +A L + G+ T +HG KS
Sbjct: 413 EILDPKKLDKLFSILRFHKDENRNYSIIIFANFKKACEELAYELSRKGFSDNTVIHGSKS 472
Query: 550 QEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG 609
QE RE +++ FR + +L+ATDVA RGIDIP+V+ V+NY M + Y HRIGRTGRAG
Sbjct: 473 QEARERAIDSFREGKDKILIATDVAARGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAG 532
Query: 610 KTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
G + TF+ D++VF DLK+ L + P L KH +++
Sbjct: 533 NKGTSCTFIDDGDSEVFLDLKKFLNKGKKKCPEWLLKHSSTQ 574
>sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP28 PE=3
SV=1
Length = 581
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/480 (41%), Positives = 296/480 (61%), Gaps = 21/480 (4%)
Query: 186 VEEKPEEAAALKLKEEAADLYD-TFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGS 244
VEE+ + + L E ++ D F + HW+ K LEEMT+RDWRIF+ED+NI+ KG
Sbjct: 102 VEEEDTASGFVPLIEMDEEIDDPLFSGQESTHWTNKNLEEMTDRDWRIFKEDYNITTKGK 161
Query: 245 KIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAA 304
IP P+R W EG + +L+ + ++GY+ P+ +Q A+IPL L++RDV+G+AETGSGKT A
Sbjct: 162 NIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLA 221
Query: 305 FVLPMLTYISRLPP--ISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIV 362
F++P+L YI + + E + P +++APTRELA QI +E KF LG +V+ I+
Sbjct: 222 FLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLGYQVLPII 281
Query: 363 GGQSIEEQGFRIRQ-GCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQ 421
GG ++ +I Q G +++ATPGRL+D +ER+ L++C +V+DEADRMIDMGFE
Sbjct: 282 GGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKD 341
Query: 422 VVGVLDAMPSSNLKPENEDEELDEKRIY----RTTYMFSATMPPAVERLARKYLRNPVVV 477
+ VLD +P+ E + + RI+ R+T MF+AT+ P VE+L +KYL +P +
Sbjct: 342 LNKVLDKLPT-----EKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKYLIDPGYL 396
Query: 478 TIGTAGKATELISQHVVMMK----ESEKFSRLQRLLDELGDKT----AIVFVNTKKNADM 529
IG AG+A + ISQ + E+ KF++L +++ T I+F N K D
Sbjct: 397 YIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVTENPLIIIFANFKHVCDS 456
Query: 530 VAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINY 589
+++ L +HG KSQ+ RE ++ FR VL+ATDVA RGIDIP+V VINY
Sbjct: 457 LSQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIPNVTLVINY 516
Query: 590 DMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 649
M + Y HRIGRTGRAG G + TF++ DT++F LK+ L + +P L KH++
Sbjct: 517 QMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLKKGGKRLPDWLYKHQS 576
>sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=PRP28 PE=3 SV=1
Length = 597
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/455 (42%), Positives = 280/455 (61%), Gaps = 21/455 (4%)
Query: 210 DMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERV 269
D R HWS K L EMT+RDWRIF ED+ I+ KG KIP R+W E L P++L +++
Sbjct: 144 DDRNSGHWSTKLLSEMTDRDWRIFNEDYGITTKGKKIPHATRSWDESGLDPKILASLKSF 203
Query: 270 GYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPP--ISEENEAEG 327
G++ P+P+Q A+IP+ L+ RDV+G+AETGSGKT AF+LP+L Y+SR+ ++ E
Sbjct: 204 GFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYLSRVDGNYLNYEKVRNE 263
Query: 328 PYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEE-----QGFRIRQGCEVVI 382
P A+V+APTRELA QI +E KF LG V+SI+GG+ +E + +G +V+
Sbjct: 264 PLALVLAPTRELALQITQEAEKFGKQLGFNVLSIIGGRQYQETMDQIDNMIVGRGVHIVV 323
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
TPGRL+D +ER+ ++C Y+V+DEADRMIDMGFE + +++ +P K E
Sbjct: 324 GTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLINLLP----KNEKLSTT 379
Query: 443 LDEKRIY---RTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKES 499
+D K + R T M++AT+ P +E++ + YL +P + IG AG+A + I QH +
Sbjct: 380 IDGKLFHLTKRLTMMYTATISPPIEKITKSYLIDPAYIYIGGAGEALDNIDQHFDYLSTY 439
Query: 500 EKFSRLQRLLDEL-GDK------TAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQ 552
+ +RL +L+ + G K I+F N K D+++ L++ +HG KSQE
Sbjct: 440 AESARLSKLIKVVQGHKRRNRNALVIIFANFKHVCDVLSLELEQNNLLNVVIHGSKSQEA 499
Query: 553 REISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTG 612
RE +LE FRT + +LVATDVA RGID+P+V+ VINY M + Y HRIGRTGRAG G
Sbjct: 500 REEALEDFRTHQAPILVATDVAARGIDVPNVSLVINYQMSKKFDEYIHRIGRTGRAGNLG 559
Query: 613 VATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
+ TFL D + F LK+ L VP L ++
Sbjct: 560 ESYTFLDDADAETFMPLKKFLKSGRKKVPEWLYRY 594
>sp|Q6CT49|PRP28_KLULA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=PRP28 PE=3 SV=1
Length = 539
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/465 (43%), Positives = 281/465 (60%), Gaps = 39/465 (8%)
Query: 172 NEKEMREEIRKKEGVEEKPEEAAALKLKEEAADLY--------DTFDMRVDRHWSEKKLE 223
N + + E+ +E V +P++ L L ++ADL D + +HWSEKK E
Sbjct: 51 NYRNLDEDELYEEQVSNEPDDL--LFLARKSADLLKKRQNEDESIVDNYLGKHWSEKKYE 108
Query: 224 EMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPE-LLRAVER-VGYKNPSPIQMAA 281
EM+ RDWRI EDFNIS KG + +P+RNW E KL PE LL + + Y P+ IQ +
Sbjct: 109 EMSTRDWRILSEDFNISSKGGTVEKPLRNWHELKLIPEDLLNIITNDLHYNEPTSIQRST 168
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IP + RD IG+A TGSGKT AF+LP+L + +PP++ + +GP A+V+APTRELAQ
Sbjct: 169 IPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHDGPLALVLAPTRELAQ 228
Query: 342 QIEEETVKFAHYLG--IKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVL 399
QI+ E +VSIVGG S+EE +R GC++++ATPGRL+DCL+ L
Sbjct: 229 QIQHEGQSITKLWKRPCNIVSIVGGHSLEEISANLRDGCDILVATPGRLLDCLDSHLLFL 288
Query: 400 NQCNYVVLDEADRMIDMGFEPQVVGVLDAMPS-SNLKPENEDEELDEKRIYRTTYMFSAT 458
Q N +VLDEAD+MID GFE Q+ +L + SN R T MF+AT
Sbjct: 289 KQVNTLVLDEADKMIDFGFEDQLTTILAKTETISN----------------RQTMMFTAT 332
Query: 459 MPPAVERLARKYLRNPVVVTIGTAGKATELISQHVV--MMKESEKFSRLQRLLDELGDKT 516
P +E++A YL+ P VT+G G+ ++ + +V + E EK L + D L +
Sbjct: 333 FSPTIEKVANGYLKKPSYVTVG--GEESKPKIKQIVRYVPDEEEKLKILVK--DFLPNYK 388
Query: 517 A--IVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVA 574
A I+F+N K+ AD + L + +R TTLHG KSQEQRE SL R + ++L+ATDVA
Sbjct: 389 APIIIFINYKRTADWLFDKLREARFRATTLHGSKSQEQREHSLSLLRNGKVDILIATDVA 448
Query: 575 GRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
GRGIDIP+V+ V+N P + + + HR+GRTGRAGKTG A TFLT
Sbjct: 449 GRGIDIPNVSLVVNLQFPKSFDSFVHRVGRTGRAGKTGTALTFLT 493
>sp|P23394|PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP28 PE=1
SV=2
Length = 588
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/419 (44%), Positives = 262/419 (62%), Gaps = 26/419 (6%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTP-ELLRAV-ERVGYK 272
+HW+EK L EM ERDWRI +ED+ I KG + P+RNW E + P +LLR + + + +
Sbjct: 136 KHWTEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFP 195
Query: 273 NPSPIQMAAIPLGL---QQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEA-EGP 328
+P+PIQ IP Q RD +G+A TGSGKT AFV+P+L +SR PP + +GP
Sbjct: 196 SPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGP 255
Query: 329 YAVVMAPTRELAQQIEEETVKFAHYLG------IKVVSIVGGQSIEEQGFRIRQGCEVVI 382
A+++APTREL QQI++ET K KV+SIVGG S+EE F + +GC++++
Sbjct: 256 KALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILV 315
Query: 383 ATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEE 442
ATPGRLID LE V+ Q +VLDEAD+MID+GFE QV +L + N D
Sbjct: 316 ATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDI------NADSA 369
Query: 443 LDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESE-K 501
++ R T MF+ATM P +E++A Y++ PV TIG + LI Q V E K
Sbjct: 370 VN-----RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDK 424
Query: 502 FSRLQRLLDELGDKTAIVFVNTKKNADMVAKNLDK-LGYRVTTLHGGKSQEQREISLEGF 560
F +L+ ++ + D I+F+N K+ AD +A+ K +VT LHG KSQEQRE SL+ F
Sbjct: 425 FKKLKPIVAKY-DPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLF 483
Query: 561 RTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 619
RT + +++AT+VA RG+DIP+V+ V+N+ + ++ Y HRIGRTGRA G A +F++
Sbjct: 484 RTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVS 542
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/460 (38%), Positives = 268/460 (58%), Gaps = 26/460 (5%)
Query: 189 KPEEAAALKLKEEAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPR 248
K +A L L + + Y+ F R + + K + MT+ + +R++ + G +PR
Sbjct: 469 KKTKAEKLSLVDHSKIEYEPF--RKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPR 526
Query: 249 PMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP 308
P++ W + LT ++L ++++ Y+ P PIQ A+P+ + RD IG+A+TGSGKT FVLP
Sbjct: 527 PIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLP 586
Query: 309 MLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIE 368
ML +I PP+ +GP +VMAPTREL QQI + KF+ LGI+ V + GG +
Sbjct: 587 MLRHIKDQPPVEA---GDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVA 643
Query: 369 EQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 425
+Q +++G E+V+ TPGR+ID L + L + ++V+DEADRM DMGFEPQ+ +
Sbjct: 644 QQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRI 703
Query: 426 LDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKA 485
+ N++PE R T +FSAT P VE LARK L PV + +G
Sbjct: 704 I-----QNIRPE------------RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVV 746
Query: 486 TELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVNTKKNADMVAKNLDKLGYRVTTL 544
+ I+Q V + ES++F RL LL E +K I VFV +++ D + +++ K Y +L
Sbjct: 747 NKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSL 806
Query: 545 HGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGR 604
HGGK Q RE ++ F+ N+L+AT VA RG+D+ ++ V+N+D P + E Y HR+GR
Sbjct: 807 HGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGR 866
Query: 605 TGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
TGRAG+ G A TF++ D DL + L S PVP +L
Sbjct: 867 TGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL 906
>sp|Q6FM43|PRP28_CANGA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=PRP28 PE=3 SV=1
Length = 582
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/422 (43%), Positives = 262/422 (62%), Gaps = 34/422 (8%)
Query: 215 RHWSEKKLEEMTERDWRIFREDFNISYKG-SKIPRPMRNWAEGKLTP-ELLRAV-ERVGY 271
+ W EK L EM ERDWRI RE+FNI+ KG + P+RNW+E + P +L+RA+ E +G+
Sbjct: 132 KSWREKLLVEMDERDWRIMREEFNITSKGKGAVKHPLRNWSETNVIPTDLVRALTEGMGF 191
Query: 272 KNPSPIQMAAIPLGLQQ-----RDVIGIAETGSGKTAAFVLPMLTYISRLP--PISEENE 324
P+ IQ IP + RD++GIA TGSGKT AF +P+L + LP P++ +
Sbjct: 192 DEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKT- 250
Query: 325 AEGPYAVVMAPTRELAQQIEEETVKFAHYL----GIKVVSIVGGQSIEEQGFRIRQGCEV 380
+GP A+V+ PTRELAQQI +E + + VSIVGG S+ + +R GC++
Sbjct: 251 LDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDI 310
Query: 381 VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENED 440
+IATPGRL+D L+ VLN+ +VLDEADRMID+GFE Q+ +L + + L
Sbjct: 311 LIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAA---- 366
Query: 441 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATE-LISQHVVMMKES 499
R T +F+AT+ +VE +A+ YL+NP+ V++G+ + + LI+Q V +
Sbjct: 367 ---------RQTMLFTATLSSSVESIAKGYLKNPLHVSVGSRWDSDKPLITQVVRHTGDD 417
Query: 500 EKFSRLQRLLDEL--GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISL 557
+K +L L D+L AI+F+N K+ AD + L + + TLHG KSQ QRE ++
Sbjct: 418 DK--KLSFLKDDLIKNGLPAIIFINYKETADWLTLRLSD-RFNIVTLHGSKSQSQRESAI 474
Query: 558 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 617
+ ++ NVL+AT+VA RG+DIPDVA V+N+ M + Y HRIGRTGRAGKTG+A T+
Sbjct: 475 QKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTGRAGKTGIAVTY 534
Query: 618 LT 619
LT
Sbjct: 535 LT 536
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/426 (41%), Positives = 266/426 (62%), Gaps = 22/426 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
++ MTE+D ++R + +IS +G +P+PM+ + + +L A+ ++G+ P+PIQ
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
P+ L+ RD+IGIAETGSGKT A++LP L ++S P + ++ +GP +++APTRELA
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQD---DGPIVLILAPTRELAV 252
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI+EE+ KF G++ I GG Q +R+G E+VIATPGRLID LE ++ L +
Sbjct: 253 QIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKR 312
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
Y+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T ++SAT P
Sbjct: 313 VTYLVLDEADRMLDMGFEPQIRKIV-----SQIRPD------------RQTLLWSATWPR 355
Query: 462 AVERLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-V 519
VE LAR++LR+P IG+ KA + I+Q + ++ EK++RL LL +L D + I +
Sbjct: 356 EVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILI 415
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV TK+ D V + L G+ +HG K+Q +R+ L F++ R ++ ATDVA RG+D
Sbjct: 416 FVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLD 475
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
+ D+ V+NYD P +E Y HRIGRTGRAG G+A TF T + +L ++L ++
Sbjct: 476 VKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQV 535
Query: 640 VPPELA 645
VPP L+
Sbjct: 536 VPPTLS 541
>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP5 PE=3 SV=2
Length = 1207
Score = 328 bits (842), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 256/437 (58%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E +L +TE + R + + I G +P+P++ WA+ LT + L V+ +GY+ P
Sbjct: 541 WHEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKP 600
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+PIQM A+P + RDVIG+A+TGSGKT AF+LPM +I PP+ + +GP ++M
Sbjct: 601 TPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKDQPPL---KDTDGPIGLIMT 657
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTRELA QI ++ F +G++ V GG I EQ +++G E+++ TPGR+ID L
Sbjct: 658 PTRELAVQIHKDCKPFLKMMGLRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAA 717
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
+ R L + YVVLDEADRM DMGFEPQV+ + +N++P+ R
Sbjct: 718 NQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIF-----ANMRPD------------RQ 760
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K L+NP+ VT+G + I Q V + E KF R+ LL E
Sbjct: 761 TILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLELLGE 820
Query: 512 LGDKT----AIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D+ ++FV ++ AD + K L GY ++HGGK Q R+ ++ F+ +
Sbjct: 821 LYDRDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPI 880
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
L+AT VA RG+D+ + VINYD P ++E Y HR GRTGRAG TGVA TF+T +
Sbjct: 881 LIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAP 940
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS P+P L
Sbjct: 941 GIAKALEQSGQPIPDRL 957
>sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-5 PE=3 SV=1
Length = 1194
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 251/414 (60%), Gaps = 27/414 (6%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
I G IP+P++ W++ LT +L +E +G++ P+PIQM A+P+ + RDVIG+A+T
Sbjct: 548 GIKVSGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKT 607
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF LPML ++ P++ ++ G A++M PTREL QI + FA L ++
Sbjct: 608 GSGKTMAFALPMLRHVKDQDPVTGDD---GAIALIMTPTRELCTQIYSDLQPFAKALKLR 664
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMI 414
VV+ GG +I++Q +++G E+++ATPGRLID L R L + Y+VLDEADRM
Sbjct: 665 VVAAYGGNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMF 724
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ + + N++P+ R T +FSATMP ++ L +K LR+P
Sbjct: 725 DMGFEPQVMKIFN-----NVRPD------------RQTILFSATMPRIIDALTKKVLRDP 767
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDEL----GDKTAIVFVNTKKNADMV 530
V +T+G I+Q V +M E +KF+RL LL EL D +++FV ++ AD +
Sbjct: 768 VEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGELYADDDDVRSLIFVERQEKADDL 827
Query: 531 AKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYD 590
+ L + GY ++HGGK QE R ++ F+ +L+AT +A RG+D+ + VINYD
Sbjct: 828 LRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINYD 887
Query: 591 MPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
P ++E Y HR GRTGRAG TG A TF+T + + + L QS PVP L
Sbjct: 888 APNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRL 941
>sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP5 PE=3 SV=1
Length = 1064
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 262/437 (59%), Gaps = 29/437 (6%)
Query: 217 WSE-KKLEEMTERDWRIFREDFN-ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNP 274
W E ++L +MTE D R + + I G +P+P++ W++ LT +L VE +GY+ P
Sbjct: 393 WVEPQELSQMTEDDIADLRLELDGIKVSGKNVPKPVQKWSQCGLTRPILDVVEGLGYEKP 452
Query: 275 SPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMA 334
+ IQM A+P+ + RDVIG+A+TGSGKT AFVLPML +I P++ ++ G A++M
Sbjct: 453 TSIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKDQDPVTGDD---GAIALIMT 509
Query: 335 PTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL-- 392
PTREL QI + + FA L ++ ++ GG +I++Q +++G E+++ATPGR+ID L
Sbjct: 510 PTRELCTQIYSDLLPFAKALKLRAIAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAA 569
Query: 393 -ERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRT 451
R L + Y+VLDEADRM DMGFEPQV+ + + N++P+ R
Sbjct: 570 NSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFN-----NVRPD------------RQ 612
Query: 452 TYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDE 511
T +FSATMP ++ L +K LR PV + +G I+Q V ++ E +KF RL LL E
Sbjct: 613 TILFSATMPRIIDALTKKVLREPVEIQVGGRSVVAPEITQIVEILDEGKKFVRLLELLGE 672
Query: 512 L----GDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNV 567
L D A++FV ++ AD + + + + GY ++HGGK QE R ++ F+ +
Sbjct: 673 LYADDDDVRALIFVERQEKADDLLREVLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPI 732
Query: 568 LVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFY 627
++AT VA RG+D+ + V+NYD P ++E Y HR GRTGRAG TG A TF+T +
Sbjct: 733 MIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAP 792
Query: 628 DLKQMLIQSNSPVPPEL 644
+ + L QS PVP +L
Sbjct: 793 GIAKALEQSGQPVPEQL 809
>sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana
GN=RH11 PE=2 SV=1
Length = 612
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 262/422 (62%), Gaps = 20/422 (4%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P+ +A+ L L + R Y P+P+Q AIP+ L +RD++
Sbjct: 135 EDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMAC 194
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEE--NEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + A P+AV+++PTRELA QI +E KF++
Sbjct: 195 AQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSY 254
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +GC++++ATPGRL D LER + ++ LDEADR
Sbjct: 255 QTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADR 314
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA ++
Sbjct: 315 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTMLFSATFPSQIQRLAADFMS 361
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKTAI--VFVNTKKNA 527
N + + +G G +T+LI+Q V ++ES+K S L LL E DK ++ VFV TK+ A
Sbjct: 362 NYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGA 421
Query: 528 DMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVI 587
D + L + T++HG ++Q++RE++L F+T R +LVATDVA RG+DIP VAHV+
Sbjct: 422 DTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVV 481
Query: 588 NYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 647
N+D+P +I+ Y HRIGRTGRAGK+G+AT F ++ + L +++ ++N VP L ++
Sbjct: 482 NFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRY 541
Query: 648 EA 649
+
Sbjct: 542 AS 543
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 325 bits (834), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/421 (41%), Positives = 249/421 (59%), Gaps = 28/421 (6%)
Query: 239 ISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAETG 298
I +G P+P+ +W++ L+ + + + +GY+ P+ IQ AIP RDVIG+A+TG
Sbjct: 406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465
Query: 299 SGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIKV 358
SGKT AF+LPM +I P+ EGP A++M PTRELA QI E F L I+
Sbjct: 466 SGKTIAFLLPMFRHIKDQRPLKT---GEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRA 522
Query: 359 VSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLER---RYAVLNQCNYVVLDEADRMID 415
GG I++Q +++G E+V+ TPGR+ID L R L++C Y+VLDEADRM D
Sbjct: 523 CCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFD 582
Query: 416 MGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNPV 475
+GFEPQV+ +++ N++P+ R T +FSAT P A+E LARK L+ PV
Sbjct: 583 LGFEPQVMRIIN-----NIRPD------------RQTVLFSATFPRAMEALARKVLKKPV 625
Query: 476 VVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELG----DKTAIVFVNTKKNADMVA 531
+T+G + Q V + E KFSRL LL EL D +VFV+ +++AD +
Sbjct: 626 EITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALL 685
Query: 532 KNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDM 591
+L K GY ++HGGK Q R+ ++ ++ ++VL+AT V RG+D+ + V+NYD
Sbjct: 686 SDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDC 745
Query: 592 PGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASK 651
P ++E Y HR+GRTGRAG TGVA TF+T D+ + L S PVP EL + AS+
Sbjct: 746 PNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKEL-QTLASQ 804
Query: 652 F 652
F
Sbjct: 805 F 805
>sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp.
japonica GN=Os11g0599500 PE=3 SV=1
Length = 623
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/426 (39%), Positives = 256/426 (60%), Gaps = 24/426 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G ++P P+ +AE L L + R Y P+P+Q AIP+ L RD++
Sbjct: 139 EDIPVETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMAC 198
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEA----EGPYAVVMAPTRELAQQIEEETVKF 350
A+TGSGKTAAF P+++ I R PP P A++++PTREL+ QI EE KF
Sbjct: 199 AQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKF 258
Query: 351 AHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEA 410
++ G++VV GG I +Q + +G ++++ATPGRL+D LER L Y+ LDEA
Sbjct: 259 SYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEA 318
Query: 411 DRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKY 470
DRM+DMGFEPQV +++ M ++ P R T +FSAT P ++R+A +
Sbjct: 319 DRMLDMGFEPQVRRIVEQM---DMPPPGA----------RQTMLFSATFPKEIQRMASDF 365
Query: 471 LRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKTA-------IVFVNT 523
L N + + +G G +T+LI Q V ++E++K S L LL D +VFV T
Sbjct: 366 LENYIFLAVGRVGSSTDLIVQRVEFVQEADKRSHLMDLLHAQRDSATPGKPTLTLVFVET 425
Query: 524 KKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDV 583
K+ AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP V
Sbjct: 426 KRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHV 485
Query: 584 AHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPE 643
AHV+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +++ + L +++ +SN VP
Sbjct: 486 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAW 545
Query: 644 LAKHEA 649
L+++ A
Sbjct: 546 LSRYAA 551
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 246/411 (59%), Gaps = 24/411 (5%)
Query: 238 NISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGIAET 297
IS KG P+P++ W + ++ ++L A+++ Y+ P+PIQ AIP + RD+IGIA+T
Sbjct: 327 GISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKT 386
Query: 298 GSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAHYLGIK 357
GSGKT AF+LPM +I P+ EAEGP AV+M PTRELA QI +E KF+ L ++
Sbjct: 387 GSGKTIAFLLPMFRHILDQRPV---GEAEGPLAVIMTPTRELALQITKECKKFSKSLALR 443
Query: 358 VVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRYAVLNQCNYVVLDEADRMI 414
VV + GG I EQ +++G E+++ TPGR+ID L R L + YVV+DEADRM
Sbjct: 444 VVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMF 503
Query: 415 DMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLRNP 474
DMGFEPQV+ ++D N++P+ R T MFSAT P +E LAR+ L P
Sbjct: 504 DMGFEPQVMRIVD-----NVRPD------------RQTVMFSATFPRTMEALARRILSKP 546
Query: 475 VVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDK-TAIVFVNTKKNADMVAKN 533
V V +G + QHV++++E +KF +L +L +K + I+FV+ +++AD + K+
Sbjct: 547 VEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKD 606
Query: 534 LDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPG 593
L K Y +LHGG Q R+ + F+ +LVAT VA RG+D+ + V+NY P
Sbjct: 607 LMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPN 666
Query: 594 NIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 644
+ E Y HR GRTGRAG G A TF+T D+ + L S S VP EL
Sbjct: 667 HYEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAEL 717
>sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium
discoideum GN=ddx42 PE=3 SV=1
Length = 986
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 263/425 (61%), Gaps = 22/425 (5%)
Query: 222 LEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAA 281
+ +TE R++ +I G+ + P+ ++ LL+A+ + + P+PIQ A
Sbjct: 276 IANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQA 335
Query: 282 IPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQ 341
IP+ L RD+I IA+TGSGKTA F+ P +++I P + + +GP A+ +APTRELA
Sbjct: 336 IPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEK---GDGPIALFLAPTRELAH 392
Query: 342 QIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQ 401
QI ET+K++ Y +K + GG S ++Q ++ GCE+++ATPGRLID ++ + LN+
Sbjct: 393 QIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNR 452
Query: 402 CNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPP 461
+Y+VLDEAD+M D GF PQV+ +++ +++P+ R T +FSAT P
Sbjct: 453 VSYLVLDEADKMFDFGFGPQVLSIVN-----HVRPD------------RQTLLFSATFKP 495
Query: 462 AVERLARKYLRNPVVVTIGTAGKATELISQHVVMMK-ESEKFSRL-QRLLDELGDKTAIV 519
VE AR L +P+ ++IG G A I+Q V ++K +S+K++ L +L L + ++
Sbjct: 496 NVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLI 555
Query: 520 FVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGID 579
FV+TK + ++ NL K G++ TLHG K+Q +R +++ F+ + N+L+ATDVA RG+D
Sbjct: 556 FVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLD 615
Query: 580 IPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSP 639
IP + +V+NYD +IE +THRIGRTGRAG TGVA T +T D DL + L ++
Sbjct: 616 IPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQF 675
Query: 640 VPPEL 644
VPPEL
Sbjct: 676 VPPEL 680
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/423 (41%), Positives = 260/423 (61%), Gaps = 22/423 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MTE + +R I+ +G +P+P+R + + +L+ + + G+ P+PIQ P+
Sbjct: 65 MTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPM 124
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
L+ RD+IGIAETGSGKT A++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 125 ALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAP---GDGPIVLVLAPTRELAVQIQ 181
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID +E + L + Y
Sbjct: 182 QEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTY 241
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGFEPQ+ ++ S ++P+ R T +SAT P VE
Sbjct: 242 LVLDEADRMLDMGFEPQIKKIV-----SQIRPD------------RQTLYWSATWPKEVE 284
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+LAR +L +P V IG+ KA ISQHV ++ ES+K+++L LL+++ D + I +F++
Sbjct: 285 QLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMD 344
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L F++ + ++ ATDVA RG+D+ D
Sbjct: 345 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKD 404
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + DL +L ++ V P
Sbjct: 405 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSP 464
Query: 643 ELA 645
ELA
Sbjct: 465 ELA 467
>sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp.
japonica GN=PL10B PE=2 SV=1
Length = 638
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 174/424 (41%), Positives = 257/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED + G +P P +AE L L + R Y P+P+Q AIP+ + RD++
Sbjct: 153 EDIPVETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMAC 212
Query: 295 AETGSGKTAAFVLPMLTYI--SRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I SR PP S + P A++++PTREL+ QI EE KFA+
Sbjct: 213 AQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAY 272
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G E+++ATPGRL+D LER L Y+ LDEADR
Sbjct: 273 QTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADR 332
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P E R T +FSAT P ++R+A +L
Sbjct: 333 MLDMGFEPQIRKIVEQM---DMPPRGE----------RQTMLFSATFPKEIQRMASDFLA 379
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
+ + + +G G +T+LI Q V + +++K S L LL + K A+ VFV TK+
Sbjct: 380 DYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQRANGTHGKQALTLVFVETKR 439
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VAH
Sbjct: 440 GADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAH 499
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
VIN+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 500 VINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWLE 559
Query: 646 KHEA 649
++ A
Sbjct: 560 RYAA 563
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 261/434 (60%), Gaps = 23/434 (5%)
Query: 214 DRHWSEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKN 273
D + + + M+E++ + + I G +PRP++++A+ +L+ A+ + GY+
Sbjct: 182 DFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEK 241
Query: 274 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVM 333
P+ IQ A+P+ L RD+IGIA+TGSGKTAAFVLPM+ +I P + +E EGP VV
Sbjct: 242 PTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKE---EGPIGVVC 298
Query: 334 APTRELAQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLE 393
APTRELA QI E KFA ++V ++ GG S +Q ++ GCE+VIATPGRLID L+
Sbjct: 299 APTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLK 358
Query: 394 RRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTY 453
+ + + Y+VLDEADRM D+GFEPQ+ ++ ++P+ R T
Sbjct: 359 MKALKMFRATYLVLDEADRMFDLGFEPQIRSIV-----GQIRPD------------RQTL 401
Query: 454 MFSATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHV-VMMKESEKFS-RLQRLLDE 511
+FSATMP VERLAR+ L +P+ VT+G G A E I Q V V+ ++EK L++L
Sbjct: 402 LFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGM 461
Query: 512 LGDKTAIVFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVAT 571
+ D +VF K D + L++ G+R+ LHG K Q R +L+ F++ Y+VLVAT
Sbjct: 462 IDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVAT 521
Query: 572 DVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAG-KTGVATTFLTFHDTDVFYDLK 630
DVA RG+DI + V+N+D+ ++M+ HRIGRTGRAG K G A T +T + +L
Sbjct: 522 DVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRFAGELV 581
Query: 631 QMLIQSNSPVPPEL 644
LI + VP EL
Sbjct: 582 HCLIAAGQDVPNEL 595
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 270/447 (60%), Gaps = 26/447 (5%)
Query: 225 MTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPL 284
MT+ + +R+ I+ +G IP+P++++ + +L V++ G+ P+PIQ P+
Sbjct: 73 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPM 132
Query: 285 GLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQIE 344
++ RD+IGIAETGSGKT +++LP + +++ P ++ +GP +V+APTRELA QI+
Sbjct: 133 AMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAH---GDGPIVLVLAPTRELAVQIQ 189
Query: 345 EETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNY 404
+E KF IK I GG Q +++G E+VIATPGRLID +E L + Y
Sbjct: 190 QEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTY 249
Query: 405 VVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVE 464
+VLDEADRM+DMGF+PQ+ ++ S+++P+ R T +SAT P VE
Sbjct: 250 LVLDEADRMLDMGFDPQIRKIV-----SHIRPD------------RQTLYWSATWPKEVE 292
Query: 465 RLARKYLRNPVVVTIGTAG-KATELISQHVVMMKESEKFSRLQRLLDELGDKTAI-VFVN 522
+L++K+L NP V IG++ KA I Q V ++ ES+K+++L +LL+++ D + I VF++
Sbjct: 293 QLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLD 352
Query: 523 TKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPD 582
TKK D + + L G+ ++HG KSQ +R+ L FR+ + ++ ATDVA RG+D+ D
Sbjct: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKD 412
Query: 583 VAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPP 642
V +VINYD PG++E Y HRIGRTGRAG G A TF T + +L +L ++ V P
Sbjct: 413 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSP 472
Query: 643 ELAKHEASKFKP----GTIPDRPPRRN 665
ELA S P G DR RR
Sbjct: 473 ELASMGRSTAPPPPGLGGFRDRGSRRG 499
>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp.
japonica GN=Os08g0159900 PE=2 SV=1
Length = 1049
Score = 319 bits (818), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/444 (39%), Positives = 259/444 (58%), Gaps = 27/444 (6%)
Query: 220 KKLEEMTERDWRIFREDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQM 279
K + +M + +R+ + G +P+P++ W + LT +LL ++++G++ P IQ
Sbjct: 393 KDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQA 452
Query: 280 AAIPLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTREL 339
A+P+ + RD IGIA+TGSGKT AFVLPML ++ P + +GP ++MAPTREL
Sbjct: 453 QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVP---GDGPIGLIMAPTREL 509
Query: 340 AQQIEEETVKFAHYLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCL---ERRY 396
QI + KF+ LGI V+I GG + +Q +++G E+V+ TPGR+ID L +
Sbjct: 510 VVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKI 569
Query: 397 AVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFS 456
L + ++V+DEADRM DMGFEPQ+ ++ N +P+ R T +FS
Sbjct: 570 TNLRRVTFLVMDEADRMFDMGFEPQITRIV-----QNTRPD------------RQTVLFS 612
Query: 457 ATMPPAVERLARKYLRNPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLDELGDKT 516
AT P VE LARK L PV + +G + I+Q V + E+E+F RL LL E DK
Sbjct: 613 ATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFRLLELLGEWFDKG 672
Query: 517 AI-VFVNTKKNADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAG 575
I VFV+++ D + K+L + GY +LHGGK Q RE +L F++ ++L+AT VA
Sbjct: 673 KILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAA 732
Query: 576 RGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQ 635
RG+D+ ++ V+NYD+P + E Y HR+GRTGRAG+ G A TF++ + DL + L
Sbjct: 733 RGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKALEL 792
Query: 636 SNSPVPPE---LAKHEASKFKPGT 656
S VP + LA +K K GT
Sbjct: 793 SEQAVPEDLKGLADRFMAKVKQGT 816
>sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana
GN=RH52 PE=2 SV=1
Length = 646
Score = 317 bits (813), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/424 (40%), Positives = 255/424 (60%), Gaps = 22/424 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L ++R Y P+P+Q AIP+ RD++
Sbjct: 130 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMAC 189
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + I G P AV+++PTRELA QI +E KF++
Sbjct: 190 AQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 249
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG + +Q + +G ++++ATPGRL D LER L ++ LDEADR
Sbjct: 250 QTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADR 309
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ ++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 310 MLDMGFEPQIRKIVQQM---DMPPPG----------VRQTMLFSATFPREIQRLASDFLS 356
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLLD---ELGDKT----AIVFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL E G++ +VFV TKK
Sbjct: 357 NYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKK 416
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ TT+HG +SQ++RE++L F+T R +LVATDVA RG+DIP VAH
Sbjct: 417 GADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAH 476
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAG +G+AT F ++T + L +++ ++N VP L
Sbjct: 477 VVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLT 536
Query: 646 KHEA 649
++ +
Sbjct: 537 RYAS 540
>sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana
GN=RH37 PE=2 SV=2
Length = 633
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 262/431 (60%), Gaps = 23/431 (5%)
Query: 235 EDFNISYKGSKIPRPMRNWAEGKLTPELLRAVERVGYKNPSPIQMAAIPLGLQQRDVIGI 294
ED I G +P P+ +AE L L + R Y P+P+Q AIP+ L+ RD++
Sbjct: 143 EDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMAC 202
Query: 295 AETGSGKTAAFVLPMLTYISRLPPISEENEAEG--PYAVVMAPTRELAQQIEEETVKFAH 352
A+TGSGKTAAF P+++ I + + + P AV+++PTRELA QI +E KF++
Sbjct: 203 AQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSY 262
Query: 353 YLGIKVVSIVGGQSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 412
G+KVV GG I +Q + +G ++++ATPGRL D LER + ++ LDEADR
Sbjct: 263 QTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADR 322
Query: 413 MIDMGFEPQVVGVLDAMPSSNLKPENEDEELDEKRIYRTTYMFSATMPPAVERLARKYLR 472
M+DMGFEPQ+ +++ M ++ P R R T +FSAT P ++RLA +L
Sbjct: 323 MLDMGFEPQIRKIVEQM---DMPP----------RGVRQTLLFSATFPREIQRLAADFLA 369
Query: 473 NPVVVTIGTAGKATELISQHVVMMKESEKFSRLQRLL-----DELGDKTAI--VFVNTKK 525
N + + +G G +T+LI Q V + +S+K S L LL + + K A+ VFV TK+
Sbjct: 370 NYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKR 429
Query: 526 NADMVAKNLDKLGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 585
AD + L G+ T++HG ++Q++RE++L+ F++ R +LVATDVA RG+DIP VAH
Sbjct: 430 GADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAH 489
Query: 586 VINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELA 645
V+N+D+P +I+ Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L
Sbjct: 490 VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLT 549
Query: 646 KHEA-SKFKPG 655
++ + S F G
Sbjct: 550 RYASRSSFGGG 560
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,843,624
Number of Sequences: 539616
Number of extensions: 11401009
Number of successful extensions: 123435
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2520
Number of HSP's successfully gapped in prelim test: 2158
Number of HSP's that attempted gapping in prelim test: 71764
Number of HSP's gapped (non-prelim): 24885
length of query: 671
length of database: 191,569,459
effective HSP length: 124
effective length of query: 547
effective length of database: 124,657,075
effective search space: 68187420025
effective search space used: 68187420025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)