BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038137
(549 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 301 bits (771), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 235/394 (59%), Gaps = 51/394 (12%)
Query: 94 NLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKS 153
N+ +L + E +++ +M A+D++ + +IG+GAFGEV++ R KA+ VYAMK L K
Sbjct: 52 NIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKF 111
Query: 154 EMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT 213
EM++R ER+++A +S +V+L+C+FQDD+YLY++MEY+PGGD++ L+ D
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD- 170
Query: 214 LTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQ 273
+ E+ A+FY E VLA+++IH IHRD+KPDN+LLD++GH+KL+DFG C +D + +
Sbjct: 171 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 274 EKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK 333
D + VGTPDYI+PEVL +
Sbjct: 231 HCD----------------------------------------TAVGTPDYISPEVLKSQ 250
Query: 334 G----YGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
G YG ECDWWS+G ++EMLVG PFY+D + T KI++ + L FPE+A++S A
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHA 310
Query: 390 KDLISKLLCNVEQRLGTKGADEIKAHPWFKGIE--WDKLYQIKAAFIPEVNDELDTQNFE 447
K+LI L + E RLG G +EIK HP+FK + WD + + A +PE++ ++D+ NF+
Sbjct: 311 KNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFD 370
Query: 448 KFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTY 481
E+ ++T P K + F+G+TY
Sbjct: 371 DIEDDKGDVETF----PIPKAFVGNQLPFIGFTY 400
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/405 (40%), Positives = 236/405 (58%), Gaps = 49/405 (12%)
Query: 92 QNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK 151
+ N+L+YLE + ++++ ++ +DFE L +IG+GAFGEV V + K V+AMK L
Sbjct: 49 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN 108
Query: 152 KSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR- 210
K EML+R + + ER++L DS I L+ +FQDD LYL+M+Y GGD++TLL +
Sbjct: 109 KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF 168
Query: 211 KDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCS 270
+D L EE ARFY+ E V+AI+S+H+ +Y+HRDIKPDN+L+D NGH++L+DFG C
Sbjct: 169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG-----SCL 223
Query: 271 NLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL 330
L E G +QS VGTPDYI+PE+L
Sbjct: 224 KLME---------DGTVQSS--------------------------VAVGTPDYISPEIL 248
Query: 331 L-----KKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK- 384
K YG ECDWWSLG MYEML G PFY++ + T KI+N + +FP +
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD 308
Query: 385 LSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQ 444
+S AKDLI +L+C+ E RLG G ++ K HP+F GI+WD + +A +IPEV+ DT
Sbjct: 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTS 368
Query: 445 NFEKFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTYKNFEIVND 489
NF+ ++ +T P S + FVG+TY + +++D
Sbjct: 369 NFDVDDDCLKNSETMPP--PTHTAFSGHHLPFVGFTYTSSCVLSD 411
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 296 bits (757), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 232/394 (58%), Gaps = 51/394 (12%)
Query: 94 NLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKS 153
N+ +L + + +++ +M A+D+E + +IG+GAFGEV++ R K+T VYAMK L K
Sbjct: 46 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 105
Query: 154 EMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT 213
EM++R ER+++A +S +V+L+ +FQDD YLY++MEY+PGGD++ L+ D
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD- 164
Query: 214 LTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQ 273
+ E+ ARFY E VLA+++IH +IHRD+KPDN+LLD++GH+KL+DFG C +
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM------ 218
Query: 274 EKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK 333
N G ++ D + VGTPDYI+PEVL +
Sbjct: 219 --------NKEGMVRCD--------------------------TAVGTPDYISPEVLKSQ 244
Query: 334 G----YGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
G YG ECDWWS+G +YEMLVG PFY+D + T KI+N + L FP++ +S EA
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 304
Query: 390 KDLISKLLCNVEQRLGTKGADEIKAHPWFKGIE--WDKLYQIKAAFIPEVNDELDTQNFE 447
K+LI L + E RLG G +EIK H +FK + W+ L A +P+++ ++DT NF+
Sbjct: 305 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 364
Query: 448 KFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTY 481
EE + +T P K + FVG+TY
Sbjct: 365 DLEEDKGEEETF----PIPKAFVGNQLPFVGFTY 394
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 232/394 (58%), Gaps = 51/394 (12%)
Query: 94 NLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKS 153
N+ +L + + +++ +M A+D+E + +IG+GAFGEV++ R K+T VYAMK L K
Sbjct: 51 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 154 EMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT 213
EM++R ER+++A +S +V+L+ +FQDD YLY++MEY+PGGD++ L+ D
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD- 169
Query: 214 LTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQ 273
+ E+ ARFY E VLA+++IH +IHRD+KPDN+LLD++GH+KL+DFG C +
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM------ 223
Query: 274 EKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK 333
N G ++ D + VGTPDYI+PEVL +
Sbjct: 224 --------NKEGMVRCD--------------------------TAVGTPDYISPEVLKSQ 249
Query: 334 G----YGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
G YG ECDWWS+G +YEMLVG PFY+D + T KI+N + L FP++ +S EA
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 309
Query: 390 KDLISKLLCNVEQRLGTKGADEIKAHPWFKGIE--WDKLYQIKAAFIPEVNDELDTQNFE 447
K+LI L + E RLG G +EIK H +FK + W+ L A +P+++ ++DT NF+
Sbjct: 310 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 369
Query: 448 KFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTY 481
EE + +T P K + FVG+TY
Sbjct: 370 DLEEDKGEEETF----PIPKAFVGNQLPFVGFTY 399
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/394 (39%), Positives = 232/394 (58%), Gaps = 51/394 (12%)
Query: 94 NLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKS 153
N+ +L + + +++ +M A+D+E + +IG+GAFGEV++ R K+T VYAMK L K
Sbjct: 51 NIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 154 EMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT 213
EM++R ER+++A +S +V+L+ +FQDD YLY++MEY+PGGD++ L+ D
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD- 169
Query: 214 LTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQ 273
+ E+ ARFY E VLA+++IH +IHRD+KPDN+LLD++GH+KL+DFG C +
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM------ 223
Query: 274 EKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK 333
N G ++ D + VGTPDYI+PEVL +
Sbjct: 224 --------NKEGMVRCD--------------------------TAVGTPDYISPEVLKSQ 249
Query: 334 G----YGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
G YG ECDWWS+G +YEMLVG PFY+D + T KI+N + L FP++ +S EA
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 309
Query: 390 KDLISKLLCNVEQRLGTKGADEIKAHPWFKGIE--WDKLYQIKAAFIPEVNDELDTQNFE 447
K+LI L + E RLG G +EIK H +FK + W+ L A +P+++ ++DT NF+
Sbjct: 310 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFD 369
Query: 448 KFEEADNQIQTSAKSGPWRKMLSSKDINFVGYTY 481
EE + +T P K + FVG+TY
Sbjct: 370 DLEEDKGEEETF----PIPKAFVGNQLPFVGFTY 399
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 227/390 (58%), Gaps = 56/390 (14%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
+Q H+ +DFE + +IG+GAFGEV V + K T +YAMK L K EML+R + + ER
Sbjct: 85 MQLHR---EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETV 227
++L D I L+ +FQD+ +LYL+M+Y GGD++TLL + +D L E+ ARFY+GE V
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
LAI+SIH+ +Y+HRDIKPDN+LLD NGH++L+DFG C + N G +
Sbjct: 202 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM--------------NDDGTV 247
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL--LKKG---YGMECDWW 342
QS VGTPDYI+PE+L ++ G YG ECDWW
Sbjct: 248 QSS--------------------------VAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
Query: 343 SLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK-LSPEAKDLISKLLCNVE 401
SLG MYEML G PFY++ + T KI+N +FP +S EAKDLI +L+C+ E
Sbjct: 282 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRE 341
Query: 402 QRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAK 461
+RLG G ++ K H +F+G+ W+ + ++A +IP+V+ DT NF + D+ + + +
Sbjct: 342 RRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNF----DVDDDVLRNTE 397
Query: 462 SGP--WRKMLSSKDINFVGYTYKNFEIVND 489
P S + F+G+T+ +D
Sbjct: 398 ILPPGSHTGFSGLHLPFIGFTFTTESCFSD 427
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 227/390 (58%), Gaps = 56/390 (14%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
+Q H+ +DFE + +IG+GAFGEV V + K T +YAMK L K EML+R + + ER
Sbjct: 69 MQLHR---EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETV 227
++L D I L+ +FQD+ +LYL+M+Y GGD++TLL + +D L E+ ARFY+GE V
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
LAI+SIH+ +Y+HRDIKPDN+LLD NGH++L+DFG C + N G +
Sbjct: 186 LAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKM--------------NDDGTV 231
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL--LKKG---YGMECDWW 342
QS VGTPDYI+PE+L ++ G YG ECDWW
Sbjct: 232 QSS--------------------------VAVGTPDYISPEILQAMEDGMGKYGPECDWW 265
Query: 343 SLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK-LSPEAKDLISKLLCNVE 401
SLG MYEML G PFY++ + T KI+N +FP +S EAKDLI +L+C+ E
Sbjct: 266 SLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRE 325
Query: 402 QRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAK 461
+RLG G ++ K H +F+G+ W+ + ++A +IP+V+ DT NF + D+ + + +
Sbjct: 326 RRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNF----DVDDDVLRNTE 381
Query: 462 SGP--WRKMLSSKDINFVGYTYKNFEIVND 489
P S + F+G+T+ +D
Sbjct: 382 ILPPGSHTGFSGLHLPFIGFTFTTESCFSD 411
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 241/433 (55%), Gaps = 63/433 (14%)
Query: 78 LEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCR 137
+ ++L +E+++++ + +L+ E +RL+ ++ DDFE L +IG+GAF EV V +
Sbjct: 24 VHQELGASELAQDKY--VADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVK 81
Query: 138 EKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIME 197
K TG VYAMK + K +ML+RG+V + ER++L D I +L+ +FQD+ YLYL+ME
Sbjct: 82 MKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME 141
Query: 198 YLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHM 256
Y GGD++TLL + + + E ARFY+ E V+AI+S+H+ Y+HRDIKPDN+LLDR GH+
Sbjct: 142 YYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHI 201
Query: 257 KLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAY 316
+L+DFG C L++DG R ++A
Sbjct: 202 RLADFGSCL--------------------KLRADGT-----------------VRSLVA- 223
Query: 317 STVGTPDYIAPEVL-------LKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRK 369
VGTPDY++PE+L YG ECDWW+LG YEM G PFY+D T K
Sbjct: 224 --VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGK 281
Query: 370 IVNWRTHLKFPEEAKLSP-EAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQ 428
IV+++ HL P + P EA+D I +LLC E RLG GA + + HP+F G++WD L
Sbjct: 282 IVHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRD 341
Query: 429 IKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSSKD-------INFVGYTY 481
F P+ DT NF+ E+ T+ SG + ++ + FVGY+Y
Sbjct: 342 SVPPFTPDFEGATDTCNFDLVEDG----LTAMVSGGGETLSDIREGAPLGVHLPFVGYSY 397
Query: 482 KNFEIVNDHQLPG 494
+ D ++PG
Sbjct: 398 SCMAL-RDSEVPG 409
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + IG G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGGDM + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++K+
Sbjct: 123 MPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 ADFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + IG G+FG V + +
Sbjct: 3 AAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGGDM + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++K+
Sbjct: 123 MPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 ADFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + IG G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++K+
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 ADFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 241 bits (614), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 83
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 84 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 144 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 203
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 204 TDFGFAK----------------------RVKGR----------------------TWXL 219
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 277
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 278 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 336 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 365
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ +AMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR ++
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWTL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVSINEKCG 345
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ +AMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 197/352 (55%), Gaps = 53/352 (15%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D FE + +G G+FG V + + K TG+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+VKL SF+D+ LY++MEY+PGG+M + L R +E ARFY + VL E +H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+ I+RD+KP+NLL+D+ G+++++DFG K + GR
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----------------------RVKGR---- 187
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
+ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 188 ------------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIK 413
PF++D+P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 230 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 285
Query: 414 AHPWFKGIEWDKLYQ--IKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
H WF +W +YQ ++A FIP+ DT NF+ +EE + ++ + K G
Sbjct: 286 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVXINEKCG 337
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ +AMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++I H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 196/352 (55%), Gaps = 53/352 (15%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D FE + +G G+FG V + + K TG+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+VKL SF+D+ LY++MEY+PGG+M + L R E ARFY + VL E +H
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+ I+RD+KP+NLL+D+ G+++++DFG K + GR
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----------------------RVKGR---- 187
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
+ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 188 ------------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIK 413
PF++D+P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 230 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 285
Query: 414 AHPWFKGIEWDKLYQ--IKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
H WF +W +YQ ++A FIP+ DT NF+ +EE + ++ + K G
Sbjct: 286 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVXINEKCG 337
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 197/352 (55%), Gaps = 53/352 (15%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D FE + +G G+FG V + + TG+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+VKL SF+D+ LY++MEY+PGG+M + L R +E ARFY + VL E +H
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+ I+RD+KP+NLL+D+ G+++++DFG K + GR
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----------------------RVKGR---- 180
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
++ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 181 ------------------TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 222
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIK 413
PF++D+P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 223 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIK 278
Query: 414 AHPWFKGIEWDKLYQ--IKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
H WF +W +YQ ++A FIP+ DT NF+ +EE + ++ + K G
Sbjct: 279 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 330
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ ++EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFGL K + GR +
Sbjct: 183 TDFGLAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+PGG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 123 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K TG+ YAMK L K ++++ Q+EH E+ + V+ +VKL SF+D+ LY+++EY
Sbjct: 64 KETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++K+
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 ADFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 211/382 (55%), Gaps = 57/382 (14%)
Query: 91 EQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 11 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 70
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMT 206
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130
Query: 207 LLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKP 266
L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK- 189
Query: 267 LDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIA 326
+ GR + GTP+Y+A
Sbjct: 190 ---------------------RVKGR----------------------TWXLCGTPEYLA 206
Query: 327 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLS 386
PE++L KGY DWW+LG ++YEM GYPPF++DEP+ KIV+ + ++FP + S
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGK--VRFP--SHFS 262
Query: 387 PEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAFIPEVNDEL 441
+ KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A FIP+
Sbjct: 263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 322
Query: 442 DTQNFEKFEEADNQIQTSAKSG 463
DT NF+ +EE + ++ + K G
Sbjct: 323 DTSNFDDYEEEEIRVXINEKCG 344
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 214/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 83
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 144 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 203
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GA ++
Sbjct: 204 TDFGFAK----------------RVKGA----------------------------TWTL 219
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 277
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 278 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 336 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 365
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ + KL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ ++EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++++
Sbjct: 123 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFGL K + GR +
Sbjct: 183 TDFGLAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ + KL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 124 APGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 210/390 (53%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ + KL SF+D+ LY++MEY
Sbjct: 64 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
PGG+M + L R E ARFY + VL E +H + I+RD+KP+NL++D+ G++K+
Sbjct: 124 APGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 63
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 64 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 123
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 124 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 184 TDFGFAK----------------------RVKGR----------------------TWXL 199
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 257
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 258 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 315
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 316 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 345
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D FE + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
TG+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAACKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++Y+M GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 211/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 83
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 84 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 143
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 144 VAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 203
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 204 TDFGFAK----------------------RVKGR----------------------TWXL 219
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 277
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 278 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 335
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + + + K G
Sbjct: 336 IPKFKGPGDTSNFDDYEEEEIAVSINEKCG 365
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 210/382 (54%), Gaps = 57/382 (14%)
Query: 91 EQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + + K +G+ YA
Sbjct: 6 EQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYA 65
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMT 206
MK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY+ GG+M +
Sbjct: 66 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 125
Query: 207 LLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKP 266
L R E ARFY + VL E +H + I+RD+KP+NLL+D+ G+++++DFG K
Sbjct: 126 HLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK- 184
Query: 267 LDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIA 326
+ GR + GTP+Y+A
Sbjct: 185 ---------------------RVKGR----------------------TWXLCGTPEYLA 201
Query: 327 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLS 386
PE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++FP + S
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VRFP--SHFS 257
Query: 387 PEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAFIPEVNDEL 441
+ KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A FIP+
Sbjct: 258 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPG 317
Query: 442 DTQNFEKFEEADNQIQTSAKSG 463
DT NF+ +EE + ++ + K G
Sbjct: 318 DTSNFDDYEEEEIRVXINEKCG 339
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 213/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NL++D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE+++ KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+AP ++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 195/352 (55%), Gaps = 53/352 (15%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D F+ + +G G+FG V + + K +G+ YAMK L K ++++ Q+EH E+ +L V+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+VKL SF+D+ LY++MEY+ GG+M + L R +E ARFY + VL E +H
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+ I+RD+KP+NLL+D G+++++DFG K + GR
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAK----------------------RVKGR---- 181
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
+ GTP+Y+APE++L KGY DWW+LG ++YEM GYP
Sbjct: 182 ------------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 223
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIK 413
PF++D+P+ KIV+ + ++FP + S + KDL+ LL ++ +R G G ++IK
Sbjct: 224 PFFADQPIQIYEKIVSGK--VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 279
Query: 414 AHPWFKGIEWDKLYQ--IKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
H WF +W +YQ ++A FIP+ DT NF+ +EE + ++ + K G
Sbjct: 280 NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVXINEKCG 331
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ + G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 232 bits (592), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+ +APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT NF+ +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNFDDYEEEEIRVXINEKCG 344
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 212/390 (54%), Gaps = 57/390 (14%)
Query: 83 ADAEVSEEEQNNLLKYLEKKETEYMRL----QRHKMGADDFEPLTMIGKGAFGEVRVCRE 138
A A EQ ++ ++L K + ++++ ++ D F+ + +G G+FG V + +
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKH 62
Query: 139 KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEY 198
K +G+ YAMK L K ++++ Q+EH E+ +L V+ +VKL SF+D+ LY++MEY
Sbjct: 63 KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ GG+M + L R +E ARFY + VL E +H + I+RD+KP+NLL+D+ G++++
Sbjct: 123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
+DFG K + GR +
Sbjct: 183 TDFGFAK----------------------RVKGR----------------------TWXL 198
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLK 378
GTP+Y+APE++L KGY DWW+LG ++YEM GYPPF++D+P+ KIV+ + ++
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK--VR 256
Query: 379 FPEEAKLSPEAKDLISKLL-CNVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ--IKAAF 433
FP + S + KDL+ LL ++ +R G G ++IK H WF +W +YQ ++A F
Sbjct: 257 FP--SHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAPF 314
Query: 434 IPEVNDELDTQNFEKFEEADNQIQTSAKSG 463
IP+ DT N + +EE + ++ + K G
Sbjct: 315 IPKFKGPGDTSNADDYEEEEIRVXINEKCG 344
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 186/347 (53%), Gaps = 54/347 (15%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K DF+ L +G G+FG V + R + G YAMK LKK ++R QVEH ER +L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
V I++++ +FQD + +++IM+Y+ GG++ +LL + A+FY E LA+E
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + I+RD+KP+N+LLD+NGH+K++DFG K
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAK--------------------------- 154
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P T Y GTPDYIAPEV+ K Y DWWS G ++YEML
Sbjct: 155 -YVPDVT----------------YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 197
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT--KGA 409
GY PFY M T KI+N L+FP + + KDL+S+L+ ++ QRLG G
Sbjct: 198 AGYTPFYDSNTMKTYEKILN--AELRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGT 253
Query: 410 DEIKAHPWFKGIEWDKLY--QIKAAFIPEVND-ELDTQNFEKFEEAD 453
+++K HPWFK + W+KL I+ + P + + DT F+K+ E D
Sbjct: 254 EDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEED 300
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 181/342 (52%), Gaps = 50/342 (14%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
R K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
L + L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
E +H + ++RDIK +NL+LD++GH+K++DFGLCK + S G+ +
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK------ 166
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
+ GTP+Y+APEVL YG DWW LG +MYE
Sbjct: 167 --------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 200
Query: 351 MLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGA 409
M+ G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +
Sbjct: 201 MMCGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPS 256
Query: 410 D--EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
D E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 257 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 298
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 184/338 (54%), Gaps = 54/338 (15%)
Query: 119 FEPLTMIGKGAFGEVRVCREKA---TGHVYAMKKLKKSEMLRRGQ-VEHVKAERNLLAEV 174
FE L ++GKG +G+V R+ TG ++AMK LKK+ ++R + H KAERN+L EV
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
IV L +FQ LYLI+EYL GG++ L R+ E+ A FY+ E +A+ +H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
+ I+RD+KP+N++L+ GH+KL+DFGLCK SI DG
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-----------SI---------HDG--- 175
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
+ ++ GT +Y+APE+L++ G+ DWWSLGA+MY+ML G
Sbjct: 176 ------------------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGTKGAD--E 411
PPF + T KI+ + +L L+ EA+DL+ KLL N RLG D E
Sbjct: 218 APPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGE 273
Query: 412 IKAHPWFKGIEWDKLY--QIKAAFIPEVNDELDTQNFE 447
++AHP+F+ I W++L +++ F P + E D F+
Sbjct: 274 VQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 193/352 (54%), Gaps = 54/352 (15%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKA---TGHVYAMKKLKKSEMLRRGQ 160
T +++ K FE L ++G+G+FG+V + R+ +GH+YAMK LKK+ + R +
Sbjct: 15 THHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 161 VEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEAR 220
V K ER++LA+V+ +VKL+ +FQ + LYLI+++L GGD+ T L ++ TEE+ +
Sbjct: 75 VR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 221 FYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
FY+ E L ++ +H I+RD+KP+N+LLD GH+KL+DFGL K
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------------- 178
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
E + H ++ AYS GT +Y+APEV+ ++G+ D
Sbjct: 179 ---------------------EAIDHEKK-----AYSFCGTVEYMAPEVVNRQGHSHSAD 212
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-N 399
WWS G +M+EML G PF + T I+ + L P+ LS EA+ L+ L N
Sbjct: 213 WWSYGVLMFEMLTGSLPFQGKDRKETMTLIL--KAKLGMPQF--LSTEAQSLLRALFKRN 268
Query: 400 VEQRLGT--KGADEIKAHPWFKGIEWDKLY--QIKAAFIPEVNDELDTQNFE 447
RLG+ GA+EIK H ++ I+W+KLY +IK F P V DT F+
Sbjct: 269 PANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 183/338 (54%), Gaps = 54/338 (15%)
Query: 119 FEPLTMIGKGAFGEVRVCREKA---TGHVYAMKKLKKSEMLRRGQ-VEHVKAERNLLAEV 174
FE L ++GKG +G+V R+ TG ++AMK LKK+ ++R + H KAERN+L EV
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
IV L +FQ LYLI+EYL GG++ L R+ E+ A FY+ E +A+ +H
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
+ I+RD+KP+N++L+ GH+KL+DFGLCK SI DG
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-----------SI---------HDG--- 175
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
+ + GT +Y+APE+L++ G+ DWWSLGA+MY+ML G
Sbjct: 176 ------------------TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGTKGAD--E 411
PPF + T KI+ + +L L+ EA+DL+ KLL N RLG D E
Sbjct: 218 APPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGE 273
Query: 412 IKAHPWFKGIEWDKLY--QIKAAFIPEVNDELDTQNFE 447
++AHP+F+ I W++L +++ F P + E D F+
Sbjct: 274 VQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 180/340 (52%), Gaps = 50/340 (14%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + ++RDIK +NL+LD++GH+K++DFGLCK + S G+ +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+ GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD- 410
G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 411 -EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 180/340 (52%), Gaps = 50/340 (14%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + ++RDIK +NL+LD++GH+K++DFGLCK + S G+ +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+ GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD- 410
G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 411 -EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 176/340 (51%), Gaps = 50/340 (14%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + ++RDIK +NL+LD++GH+K++DFGLCK K F
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-------------- 166
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 167 ---------------------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD- 410
G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 411 -EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 176/340 (51%), Gaps = 50/340 (14%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + ++RDIK +NL+LD++GH+K++DFGLCK K F
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC-------------- 166
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 167 ---------------------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD- 410
G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 411 -EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 179/340 (52%), Gaps = 50/340 (14%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+E
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + ++RDIK +NL+LD++GH+K++DFGLCK + S G+ +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 163
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 164 ------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD- 410
G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +D
Sbjct: 200 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 411 -EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 179/340 (52%), Gaps = 50/340 (14%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF+ L ++GKG FG+V + REKATG YAMK L+K ++ + +V H E +L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L +FQ + L +MEY GG++ L R+ TEE ARFY E V A+E
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H + ++RDIK +NL+LD++GH+K++DFGLCK + S G+ +
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK---------EGISDGATMK-------- 168
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
GTP+Y+APEVL YG DWW LG +MYEM+
Sbjct: 169 ------------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD- 410
G PFY+ + I+ ++FP LSPEAK L++ LL + +QRLG +D
Sbjct: 205 CGRLPFYNQDHERLFELIL--MEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 260
Query: 411 -EIKAHPWFKGIEWDKLYQIK--AAFIPEVNDELDTQNFE 447
E+ H +F I W + Q K F P+V E+DT+ F+
Sbjct: 261 KEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 300
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 182/344 (52%), Gaps = 51/344 (14%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
+H++ ++FE L ++GKG FG+V + +EKATG YAMK LKK ++ + +V H E +
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
L + L SFQ + L +MEY GG++ L R+ +E+ ARFY E V A+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 231 ESIH-KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ +H + N ++RD+K +NL+LD++GH+K++DFGLCK K F
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------ 309
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
GTP+Y+APEVL YG DWW LG +MY
Sbjct: 310 -----------------------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 340
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRL--GT 406
EM+ G PFY+ + I+ ++FP L PEAK L+S LL + +QRL G+
Sbjct: 341 EMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGS 396
Query: 407 KGADEIKAHPWFKGIEWDKLYQIKAA--FIPEVNDELDTQNFEK 448
+ A EI H +F GI W +Y+ K + F P+V E DT+ F++
Sbjct: 397 EDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 181/344 (52%), Gaps = 51/344 (14%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
+H++ ++FE L ++GKG FG+V + +EKATG YAMK LKK ++ + +V H E +
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
L + L SFQ + L +MEY GG++ L R+ +E+ ARFY E V A+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 264
Query: 231 ESIHKH-NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ +H N ++RD+K +NL+LD++GH+K++DFGLCK K F
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF------------ 312
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
GTP+Y+APEVL YG DWW LG +MY
Sbjct: 313 -----------------------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 343
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRL--GT 406
EM+ G PFY+ + I+ ++FP L PEAK L+S LL + +QRL G+
Sbjct: 344 EMMCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGS 399
Query: 407 KGADEIKAHPWFKGIEWDKLYQIKAA--FIPEVNDELDTQNFEK 448
+ A EI H +F GI W +Y+ K + F P+V E DT+ F++
Sbjct: 400 EDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 443
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 52/346 (15%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKA---TGHVYAMKKLKKSEMLRRGQV-EHVKAER 168
K+G ++FE L ++G GA+G+V + R+ + TG +YAMK LKK+ ++++ + EH + ER
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 169 NLLAEV-DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETV 227
+L + S +V L+ +FQ + L+LI++Y+ GG++ T L +++ TE E + YVGE V
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIV 169
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
LA+E +HK I+RDIK +N+LLD NGH+ L+DFGL K +
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER------------- 216
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL--KKGYGMECDWWSLG 345
AY GT +Y+AP+++ G+ DWWSLG
Sbjct: 217 ---------------------------AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 346 AIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRL 404
+MYE+L G PF D ++ +I + P ++S AKDLI +LL + ++RL
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 309
Query: 405 GT--KGADEIKAHPWFKGIEWDKLY--QIKAAFIPEVNDELDTQNF 446
G + ADEIK H +F+ I WD L ++ A F P + DELD NF
Sbjct: 310 GCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 189/353 (53%), Gaps = 56/353 (15%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATG----HVYAMKKLKKSEMLRRG 159
T +++ K FE L ++G+G+FG+V + + K +G +YAMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 160 QVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEA 219
+V K ER++L EV+ IVKL+ +FQ + LYLI+++L GGD+ T L ++ TEE+
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
+FY+ E LA++ +H I+RD+KP+N+LLD GH+KL+DFGL K
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------- 174
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
E + H ++ AYS GT +Y+APEV+ ++G+
Sbjct: 175 ----------------------ESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC- 398
DWWS G +M+EML G PF + T I+ + L P+ LSPEA+ L+ L
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQ--FLSPEAQSLLRMLFKR 263
Query: 399 NVEQRLGT--KGADEIKAHPWFKGIEWDKLY--QIKAAFIPEVNDELDTQNFE 447
N RLG G +EIK H +F I+W+KLY +I F P DT F+
Sbjct: 264 NPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFD 316
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 183/352 (51%), Gaps = 53/352 (15%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
++ ++FE L ++GKG FG+V + +EKATG YAMK LKK ++ + +V H E +L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L SFQ + L +MEY GG++ L R+ +E+ ARFY E V A++
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 233 IHKH-NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+H N ++RD+K +NL+LD++GH+K++DFGLCK K F
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-------------- 170
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
GTP+Y+APEVL YG DWW LG +MYEM
Sbjct: 171 ---------------------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRL--GTKG 408
+ G PFY+ + I+ ++FP L PEAK L+S LL + +QRL G++
Sbjct: 204 MCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSED 259
Query: 409 ADEIKAHPWFKGIEWDKLYQIKAA--FIPEVNDELDTQNFEKFEEADNQIQT 458
A EI H +F GI W +Y+ K + F P+V E DT+ F+ EE Q+ T
Sbjct: 260 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFD--EEFTAQMIT 309
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 183/352 (51%), Gaps = 53/352 (15%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
++ ++FE L ++GKG FG+V + +EKATG YAMK LKK ++ + +V H E +L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L SFQ + L +MEY GG++ L R+ +E+ ARFY E V A++
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 233 IHKH-NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+H N ++RD+K +NL+LD++GH+K++DFGLCK K F
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-------------- 169
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
GTP+Y+APEVL YG DWW LG +MYEM
Sbjct: 170 ---------------------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 202
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRL--GTKG 408
+ G PFY+ + I+ ++FP L PEAK L+S LL + +QRL G++
Sbjct: 203 MCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSED 258
Query: 409 ADEIKAHPWFKGIEWDKLYQIKAA--FIPEVNDELDTQNFEKFEEADNQIQT 458
A EI H +F GI W +Y+ K + F P+V E DT+ F+ EE Q+ T
Sbjct: 259 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFD--EEFTAQMIT 308
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 183/352 (51%), Gaps = 53/352 (15%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
++ ++FE L ++GKG FG+V + +EKATG YAMK LKK ++ + +V H E +L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
+ L SFQ + L +MEY GG++ L R+ +E+ ARFY E V A++
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 233 IHKH-NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+H N ++RD+K +NL+LD++GH+K++DFGLCK K F
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF-------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
GTP+Y+APEVL YG DWW LG +MYEM
Sbjct: 172 ---------------------------CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 204
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRL--GTKG 408
+ G PFY+ + I+ ++FP L PEAK L+S LL + +QRL G++
Sbjct: 205 MCGRLPFYNQDHEKLFELIL--MEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSED 260
Query: 409 ADEIKAHPWFKGIEWDKLYQIKAA--FIPEVNDELDTQNFEKFEEADNQIQT 458
A EI H +F GI W +Y+ K + F P+V E DT+ F+ EE Q+ T
Sbjct: 261 AKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFD--EEFTAQMIT 310
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 182/332 (54%), Gaps = 54/332 (16%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATG----HVYAMKKLKKSEMLRRG 159
T +++ K FE L ++G+G+FG+V + + K +G +YAMK LKK+ + R
Sbjct: 12 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 70
Query: 160 QVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEA 219
+V K ER++L EV+ IVKL+ +FQ + LYLI+++L GGD+ T L ++ TEE+
Sbjct: 71 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 129
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
+FY+ E LA++ +H I+RD+KP+N+LLD GH+KL+DFGL K
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------- 175
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
E + H ++ AYS GT +Y+APEV+ ++G+
Sbjct: 176 ----------------------ESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSA 208
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC- 398
DWWS G +M+EML G PF + T I+ + L P+ LSPEA+ L+ L
Sbjct: 209 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKR 264
Query: 399 NVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ 428
N RLG G +EIK H +F I+W+KLY+
Sbjct: 265 NPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 296
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 182/332 (54%), Gaps = 54/332 (16%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATG----HVYAMKKLKKSEMLRRG 159
T +++ K FE L ++G+G+FG+V + + K +G +YAMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 160 QVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEA 219
+V K ER++L EV+ IVKL+ +FQ + LYLI+++L GGD+ T L ++ TEE+
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
+FY+ E LA++ +H I+RD+KP+N+LLD GH+KL+DFGL K
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-------------- 174
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
E + H ++ AYS GT +Y+APEV+ ++G+
Sbjct: 175 ----------------------ESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC- 398
DWWS G +M+EML G PF + T I+ + L P+ LSPEA+ L+ L
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKR 263
Query: 399 NVEQRLGT--KGADEIKAHPWFKGIEWDKLYQ 428
N RLG G +EIK H +F I+W+KLY+
Sbjct: 264 NPANRLGAGPDGVEEIKRHSFFSTIDWNKLYR 295
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 188/372 (50%), Gaps = 53/372 (14%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN-LLAEVDS 176
DF L +IGKG+FG+V + R KA YA+K L+K +L++ + +H+ +ERN LL V
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+V L+ SFQ + LY +++Y+ GG++ L R+ E ARFY E A+ +H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
N ++RD+KP+N+LLD GH+ L+DFGLCK
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK------------------------------- 187
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
E ++H + GTP+Y+APEVL K+ Y DWW LGA++YEML G P
Sbjct: 188 -----ENIEHNSTTS-----TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGTK-GADEIKA 414
PFYS I+N LK ++ A+ L+ LL + +RLG K EIK+
Sbjct: 238 PFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293
Query: 415 HPWFKGIEWDKLY--QIKAAFIPEVNDELDTQNFE-KFEE--ADNQIQTSAKSGPWRKML 469
H +F I WD L +I F P V+ D ++F+ +F E N I + S +
Sbjct: 294 HVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKAPDSVLVTASV 353
Query: 470 SSKDINFVGYTY 481
F+G++Y
Sbjct: 354 KEAAEAFLGFSY 365
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 194/392 (49%), Gaps = 67/392 (17%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DFE M+GKG+FG+V + K T +A+K LKK +L VE E+ +L+
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 173 EV-DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIE 231
+ + ++C+FQ E L+ +MEYL GGD+M + A FY E +L ++
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 232 SIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+H ++RD+K DN+LLD++GH+K++DFG+CK N+ G +++
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK---------------ENMLGDAKTN- 177
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
GTPDYIAPE+LL + Y DWWS G ++YEM
Sbjct: 178 -------------------------EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 212
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK-LSPEAKDLISKLLCN-VEQRLGTKGA 409
L+G PF+ + I + P + L EAKDL+ KL E+RLG +G
Sbjct: 213 LIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG- 266
Query: 410 DEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFEK-FEEADNQIQTSAKSGPWR 466
+I+ HP F+ I W++L +I F P+V D NF+K F ++ + R
Sbjct: 267 -DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLXFAD-----R 320
Query: 467 KMLSSKDINFVGYTYKNFEIVNDHQLPGIAEL 498
+++S D N ++NF +N PG+ L
Sbjct: 321 ALINSMDQN----MFRNFXFMN----PGMERL 344
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/391 (31%), Positives = 194/391 (49%), Gaps = 65/391 (16%)
Query: 113 KMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLA 172
K+ +DF M+GKG+FG+V + K T +A+K LKK +L VE E+ +L+
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 173 EV-DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIE 231
+ + ++C+FQ E L+ +MEYL GGD+M + A FY E +L ++
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 232 SIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+H ++RD+K DN+LLD++GH+K++DFG+CK N+ G +++
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK---------------ENMLGDAKTN- 176
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
GTPDYIAPE+LL + Y DWWS G ++YEM
Sbjct: 177 -------------------------XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM 211
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK-LSPEAKDLISKLLCN-VEQRLGTKGA 409
L+G PF+ + I + P + L EAKDL+ KL E+RLG +G
Sbjct: 212 LIGQSPFHGQDEEELFHSI-----RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG- 265
Query: 410 DEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRK 467
+I+ HP F+ I W++L +I F P+V D NF+K E + + + S R
Sbjct: 266 -DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK-EFLNEKPRLSFAD---RA 320
Query: 468 MLSSKDINFVGYTYKNFEIVNDHQLPGIAEL 498
+++S D N ++NF +N PG+ L
Sbjct: 321 LINSMDQN----MFRNFXFMN----PGMERL 343
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 175/343 (51%), Gaps = 52/343 (15%)
Query: 112 HKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL 171
+++G D+FE + ++GKG+FG+V + R K TG +YA+K LKK +L+ VE E+ +L
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRIL 77
Query: 172 AEVDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
+ ++ + +L+C FQ + L+ +ME++ GGD+M + + E ARFY E + A+
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISAL 137
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+H I+RD+K DN+LLD GH KL+DFG+CK C+ + F
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC------------ 185
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
GTPDYIAPE+L + YG DWW++G ++YE
Sbjct: 186 -----------------------------GTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216
Query: 351 MLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT--- 406
ML G+ PF ++ I+N + +P L +A ++ + N RLG+
Sbjct: 217 MLCGHAPFEAENEDDLFEAILN--DEVVYP--TWLHEDATGILKSFMTKNPTMRLGSLTQ 272
Query: 407 KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFE 447
G I HP+FK I+W +L QI+ F P + D NF+
Sbjct: 273 GGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD 315
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 168/316 (53%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 191
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A S VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 192 ------------------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 234 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 289
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 290 KAHPFFESVTWENLHQ 305
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 168/316 (53%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 187
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A S VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 188 ------------------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 230 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 285
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 286 KAHPFFESVTWENLHQ 301
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G ++ + + + E RFY E V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A S VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLP 232
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 169/323 (52%), Gaps = 47/323 (14%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
Q K +DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER+
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+++ +D VKLY +FQDDE LY + Y G+++ + + + E RFY E V A
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------- 166
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
A VGT Y++PE+L +K D W+LG I+Y
Sbjct: 167 -------------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 201
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT-- 406
+++ G PPF + +KI+ + FPE K P+A+DL+ KLL + +RLG
Sbjct: 202 QLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEE 257
Query: 407 -KGADEIKAHPWFKGIEWDKLYQ 428
+G +KAHP+F+ + W+ L+Q
Sbjct: 258 MEGYGPLKAHPFFESVTWENLHQ 280
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 169/323 (52%), Gaps = 47/323 (14%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
Q K +DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER+
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+++ +D VKLY +FQDDE LY + Y G+++ + + + E RFY E V A
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------- 167
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
A VGT Y++PE+L +K D W+LG I+Y
Sbjct: 168 -------------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 202
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT-- 406
+++ G PPF + +KI+ + FPE K P+A+DL+ KLL + +RLG
Sbjct: 203 QLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEE 258
Query: 407 -KGADEIKAHPWFKGIEWDKLYQ 428
+G +KAHP+F+ + W+ L+Q
Sbjct: 259 MEGYGPLKAHPFFESVTWENLHQ 281
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 168/316 (53%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A + VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 169/323 (52%), Gaps = 47/323 (14%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
Q K +DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER+
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+++ +D VKLY +FQDDE LY + Y G+++ + + + E RFY E V A
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-------------- 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
A VGT Y++PE+L +K D W+LG I+Y
Sbjct: 169 -------------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 203
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT-- 406
+++ G PPF + +KI+ + FPE K P+A+DL+ KLL + +RLG
Sbjct: 204 QLVAGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEE 259
Query: 407 -KGADEIKAHPWFKGIEWDKLYQ 428
+G +KAHP+F+ + W+ L+Q
Sbjct: 260 MEGYGPLKAHPFFESVTWENLHQ 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 165
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 166 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 207
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 208 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 263
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 264 KAHPFFESVTWENLHQ 279
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 191
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 192 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 234 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 289
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 290 KAHPFFESVTWENLHQ 305
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 187
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 188 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 230 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 285
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 286 KAHPFFESVTWENLHQ 301
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 172
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 173 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 214
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 215 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 270
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 271 KAHPFFESVTWENLHQ 286
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 167/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLP 232
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 176/348 (50%), Gaps = 57/348 (16%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+G DF+ L +IG+G++ +V + R K T +YAM+ +KK + ++ V+ E+++ +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 174 VDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L EE ARFY E LA+
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H+ I+RD+K DN+LLD GH+KL+D+G+CK
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--------------------------E 202
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+ P T + GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 203 GLRPGDTTS---------------TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 353 VGYPPF----YSDEPMSTCRKI---VNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRL 404
G PF SD P V ++ P LS +A ++ L + ++RL
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERL 305
Query: 405 GT---KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFE 447
G G +I+ HP+F+ ++WD + Q+ F P ++ E NF+
Sbjct: 306 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 195
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 196 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 237
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 238 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 293
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 294 KAHPFFESVTWENLHQ 309
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 191 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 233 PFRAGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 289 KAHPFFESVTWENLHQ 304
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 57/348 (16%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+G DF+ L +IG+G++ +V + R K T +YAMK +KK + ++ V+ E+++ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 174 VDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L EE ARFY E LA+
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H+ I+RD+K DN+LLD GH+KL+D+G+CK
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--------------------------E 155
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+ P T GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 156 GLRPGDTTS---------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 353 VGYPPF----YSDEPMSTCRKI---VNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRL 404
G PF SD P V ++ P LS +A ++ L + ++RL
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERL 258
Query: 405 GT---KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFE 447
G G +I+ HP+F+ ++WD + Q+ F P ++ E NF+
Sbjct: 259 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 188
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 189 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FPE K P+A+DL+ KLL + +RLG +G +
Sbjct: 231 PFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 287 KAHPFFESVTWENLHQ 302
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 175/348 (50%), Gaps = 57/348 (16%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+G DF+ L +IG+G++ +V + R K T +YAMK +KK + ++ V+ E+++ +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 174 VDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L EE ARFY E LA+
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H+ I+RD+K DN+LLD GH+KL+D+G+CK
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--------------------------E 170
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+ P T GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 171 GLRPGDTTS---------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 353 VGYPPF----YSDEPMSTCRKI---VNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRL 404
G PF SD P V ++ P +S +A ++ L + ++RL
Sbjct: 216 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SMSVKAASVLKSFLNKDPKERL 273
Query: 405 GT---KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFE 447
G G +I+ HP+F+ ++WD + Q+ F P ++ E NF+
Sbjct: 274 GCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 175/348 (50%), Gaps = 57/348 (16%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+G DF+ L +IG+G++ +V + R K T +YAMK +KK + ++ V+ E+++ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 174 VDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
++ +V L+ FQ + L+ ++EY+ GGD+M + R+ L EE ARFY E LA+
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H+ I+RD+K DN+LLD GH+KL+D+G+CK
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--------------------------E 159
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+ P T GTP+YIAPE+L + YG DWW+LG +M+EM+
Sbjct: 160 GLRPGDTTS---------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 353 VGYPPF----YSDEPMSTCRKI---VNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRL 404
G PF SD P V ++ P LS +A ++ L + ++RL
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERL 262
Query: 405 GT---KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFE 447
G G +I+ HP+F+ ++WD + Q+ F P ++ E NF+
Sbjct: 263 GCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 166/316 (52%), Gaps = 47/316 (14%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++G+G+F V + RE AT YA+K L+K +++ +V +V ER++++ +D
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
VKLY +FQDDE LY + Y G+++ + + + E RFY E V A+E +H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KP+N+LL+ + H++++DFG K L + Q +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------------------- 193
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
A VGT Y++PE+L +K D W+LG I+Y+++ G P
Sbjct: 194 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 235
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT---KGADEI 412
PF + +KI+ + FP A P+A+DL+ KLL + +RLG +G +
Sbjct: 236 PFRAGNEYLIFQKII--KLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 291
Query: 413 KAHPWFKGIEWDKLYQ 428
KAHP+F+ + W+ L+Q
Sbjct: 292 KAHPFFESVTWENLHQ 307
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 193/378 (51%), Gaps = 57/378 (15%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-S 176
DF L ++GKG+FG+V + K T +YA+K LKK +++ VE E+ +LA +D
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+ +L+ FQ + LY +MEY+ GGD+M + + E +A FY E + + +HK
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR 139
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
I+RD+K DN++LD GH+K++DFG+CK + ++F
Sbjct: 140 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC------------------ 181
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
GTPDYIAPE++ + YG DWW+ G ++YEML G P
Sbjct: 182 -----------------------GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 218
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT--KGADEIK 413
PF ++ + I+ ++ +P+ LS EA + L+ + +RLG +G +++
Sbjct: 219 PFDGEDEDELFQSIM--EHNVSYPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVR 274
Query: 414 AHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSS 471
H +F+ I+W+KL +I+ F P+V + +NF+KF + P + ++++
Sbjct: 275 EHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLXP----PDQLVIAN 329
Query: 472 KD-INFVGYTYKNFEIVN 488
D +F G+ Y N + V+
Sbjct: 330 IDQSDFEGFXYVNPQFVH 347
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 172/345 (49%), Gaps = 52/345 (15%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
R +M DF L ++GKG+FG+V + K T +YA+K LKK +++ VE E+ +
Sbjct: 335 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 394
Query: 171 LA-EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
LA + +L+ FQ + LY +MEY+ GGD+M + + E A FY E +
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 454
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ + I+RD+K DN++LD GH+K++DFG+CK + K F
Sbjct: 455 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXF------------ 502
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
GTPDYIAPE++ + YG DWW+ G ++Y
Sbjct: 503 -----------------------------CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 533
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT-- 406
EML G PF ++ + I+ ++ +P+ +S EA + L+ + +RLG
Sbjct: 534 EMLAGQAPFEGEDEDELFQSIM--EHNVAYPKS--MSKEAVAICKGLMTKHPGKRLGCGP 589
Query: 407 KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFEKF 449
+G +IK H +F+ I+W+KL +I+ + P+ + + +NF++F
Sbjct: 590 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRF 633
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 171/345 (49%), Gaps = 52/345 (15%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
R +M DF L ++GKG+FG+V + K T +YA+K LKK +++ VE E+ +
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 73
Query: 171 LA-EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
LA + +L+ FQ + LY +MEY+ GGD+M + + E A FY E +
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 133
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ + I+RD+K DN++LD GH+K++DFG+CK + K F
Sbjct: 134 LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC----------- 182
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
GTPDYIAPE++ + YG DWW+ G ++Y
Sbjct: 183 ------------------------------GTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 212
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT-- 406
EML G PF ++ + I+ ++ +P+ +S EA + L+ + +RLG
Sbjct: 213 EMLAGQAPFEGEDEDELFQSIM--EHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGP 268
Query: 407 KGADEIKAHPWFKGIEWDKL--YQIKAAFIPEVNDELDTQNFEKF 449
+G +IK H +F+ I+W+KL +I+ + P+ + +NF++F
Sbjct: 269 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRF 312
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 159/326 (48%), Gaps = 53/326 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D FE L IGKG+FG+V + ++ T +YAMK + K + + R +V +V E ++ ++
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
+V L+ SFQD+E ++++++ L GGD+ L + EE + ++ E V+A++ +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRD+KPDN+LLD +GH+ ++DF + L P
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAML----------------------------P 166
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK---GYGMECDWWSLGAIMYEMLV 353
R TQ + GT Y+APE+ + GY DWWSLG YE+L
Sbjct: 167 RETQ--------------ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 354 GYPPFYSDEPMSTCRKIVNWRTH-LKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
G P++ S+ + + T + +P + S E L+ KLL N +QR +
Sbjct: 213 GRRPYHIRSSTSSKEIVHTFETTVVTYP--SAWSQEMVSLLKKLLEPNPDQRFSQ--LSD 268
Query: 412 IKAHPWFKGIEWDKLYQ--IKAAFIP 435
++ P+ I WD ++Q + FIP
Sbjct: 269 VQNFPYMNDINWDAVFQKRLIPGFIP 294
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 173/352 (49%), Gaps = 58/352 (16%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+R + + F ++GKG FGEV C+ +ATG +YA KKL+K + +R E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGET 226
+L +V+S +V L +++ + L L++ + GGD+ + M + E A FY E
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+E +H+ ++RD+KP+N+LLD +GH+++SD GL
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL---------------------AV 334
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
+G+ + R VGT Y+APEV+ + Y DWW+LG
Sbjct: 335 HVPEGQTIKGR---------------------VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQR 403
++YEM+ G PF + ++ R + PEE + SP+A+ L S+LLC + +R
Sbjct: 374 LLYEMIAGQSPFQQRKKKIKREEVE--RLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 404 LGTKG--ADEIKAHPWFKGIEWDKL--YQIKAAFIPE-----VNDELDTQNF 446
LG +G A E+K HP FK + + +L ++ F P+ D LD + F
Sbjct: 432 LGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQF 483
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 174/352 (49%), Gaps = 58/352 (16%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+R + + F ++GKG FGEV C+ +ATG +YA KKL+K + +R E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGET 226
+L +V+S +V L +++ + L L++ + GGD+ + M + E A FY E
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+E +H+ ++RD+KP+N+LLD +GH+++SD GL
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL---------------------AV 334
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
+G+ + R VGT Y+APEV+ + Y DWW+LG
Sbjct: 335 HVPEGQTIKGR---------------------VGTVGYMAPEVVKNERYTFSPDWWALGC 373
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQR 403
++YEM+ G PF + R+ V R + PEE + SP+A+ L S+LLC + +R
Sbjct: 374 LLYEMIAGQSPFQQRKKKIK-REEVE-RLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 404 LGTKG--ADEIKAHPWFKGIEWDKL--YQIKAAFIPE-----VNDELDTQNF 446
LG +G A E+K HP FK + + +L ++ F P+ D LD + F
Sbjct: 432 LGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQF 483
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 60/350 (17%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEM-LRRGQVEHVKAERNLLA 172
+ +DF +IG+G FGEV CR+ TG +YAMK L K + +++G+ + ER +L+
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN-ERIMLS 243
Query: 173 EV---DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
V D IV + +F + L I++ + GGD+ L + +E + RFY E +L
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H ++RD+KP N+LLD +GH+++SD GL C DFS
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS----------- 342
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 348
+ +++VGT Y+APEVL K Y DW+SLG ++
Sbjct: 343 ----------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 380
Query: 349 YEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT- 406
+++L G+ PF + +I + SPE + L+ LL +V +RLG
Sbjct: 381 FKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 439
Query: 407 -KGADEIKAHPWFKGIEWDKLYQIK--AAFIP---EVN--DELDTQNFEK 448
+GA E+K P+F+ ++W ++ K IP EVN D D +F++
Sbjct: 440 GRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDE 489
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 60/350 (17%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEM-LRRGQVEHVKAERNLLA 172
+ +DF +IG+G FGEV CR+ TG +YAMK L K + +++G+ + ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN-ERIMLS 244
Query: 173 EV---DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
V D IV + +F + L I++ + GGD+ L + +E + RFY E +L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H ++RD+KP N+LLD +GH+++SD GL C DFS
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS----------- 343
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 348
+ +++VGT Y+APEVL K Y DW+SLG ++
Sbjct: 344 ----------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 349 YEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT- 406
+++L G+ PF + +I + SPE + L+ LL +V +RLG
Sbjct: 382 FKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 407 -KGADEIKAHPWFKGIEWDKLYQIK--AAFIP---EVN--DELDTQNFEK 448
+GA E+K P+F+ ++W ++ K IP EVN D D +F++
Sbjct: 441 GRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDE 490
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 74/387 (19%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ MG D F ++G+G FGEV C+ KATG +YA KKL K + +R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD----TLTEEEARFYVG 224
+LA+V S IV L +F+ L L+M + GGD+ + D E A FY
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
+ V +E +H+ N I+RD+KP+N+LLD +G++++SD GL L + K ++
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA------ 350
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
GTP ++APE+LL + Y D+++L
Sbjct: 351 -----------------------------------GTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEA-----KLSPEAKDLISKLLC- 398
G +YEM+ PF + K+ N + E+A K SP +KD LL
Sbjct: 376 GVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 399 NVEQRLGTK--GADEIKAHPWFKGIEWDKL--YQIKAAFIPE--------VND--ELDTQ 444
+ E+RLG + D ++ HP F+ I W +L + F+P+ + D T
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV 490
Query: 445 NFEKFEEADNQIQTSAKSG----PWRK 467
FE+AD + SG PW++
Sbjct: 491 KGVAFEKADTEFFQEFASGTCPIPWQE 517
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 74/387 (19%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ MG D F ++G+G FGEV C+ KATG +YA KKL K + +R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD----TLTEEEARFYVG 224
+LA+V S IV L +F+ L L+M + GGD+ + D E A FY
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
+ V +E +H+ N I+RD+KP+N+LLD +G++++SD GL L + K ++
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA------ 350
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
GTP ++APE+LL + Y D+++L
Sbjct: 351 -----------------------------------GTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEA-----KLSPEAKDLISKLLC- 398
G +YEM+ PF + K+ N + E+A K SP +KD LL
Sbjct: 376 GVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 399 NVEQRLGTK--GADEIKAHPWFKGIEWDKL--YQIKAAFIPE--------VND--ELDTQ 444
+ E+RLG + D ++ HP F+ I W +L + F+P+ + D T
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV 490
Query: 445 NFEKFEEADNQIQTSAKSG----PWRK 467
FE+AD + SG PW++
Sbjct: 491 KGVAFEKADTEFFQEFASGTCPIPWQE 517
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 60/350 (17%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEM-LRRGQVEHVKAERNLLA 172
+ +DF +IG+G FGEV CR+ TG +YAMK L K + +++G+ + ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN-ERIMLS 244
Query: 173 EV---DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
V D IV + +F + L I++ + GGD+ L + +E + RFY E +L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H ++RD+KP N+LLD +GH+++SD GL C DFS
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS----------- 343
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 348
+ +++VGT Y+APEVL K Y DW+SLG ++
Sbjct: 344 ----------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 349 YEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT- 406
+++L G+ PF + +I + SPE + L+ LL +V +RLG
Sbjct: 382 FKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 407 -KGADEIKAHPWFKGIEWDKLYQIK--AAFIP---EVN--DELDTQNFEK 448
+GA E+K P+F+ ++W ++ K IP EVN D D +F++
Sbjct: 441 GRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDE 490
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 172/350 (49%), Gaps = 60/350 (17%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEM-LRRGQVEHVKAERNLLA 172
+ +DF +IG+G FGEV CR+ TG +YAMK L K + +++G+ + ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN-ERIMLS 244
Query: 173 EV---DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
V D IV + +F + L I++ + GGD+ L + +E + RFY E +L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+E +H ++RD+KP N+LLD +GH+++SD GL C DFS
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA----C------DFS----------- 343
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 348
+ +++VGT Y+APEVL K Y DW+SLG ++
Sbjct: 344 ----------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 381
Query: 349 YEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGT- 406
+++L G+ PF + +I + SPE + L+ LL +V +RLG
Sbjct: 382 FKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCL 440
Query: 407 -KGADEIKAHPWFKGIEWDKLYQIK--AAFIP---EVN--DELDTQNFEK 448
+GA E+K P+F+ ++W ++ K IP EVN D D +F++
Sbjct: 441 GRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDE 490
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 74/387 (19%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ MG D F ++G+G FGEV C+ KATG +YA KKL K + +R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD----TLTEEEARFYVG 224
+LA+V S IV L +F+ L L+M + GGD+ + D E A FY
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
+ V +E +H+ N I+RD+KP+N+LLD +G++++SD GL L + K ++
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA------ 350
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
GTP ++APE+LL + Y D+++L
Sbjct: 351 -----------------------------------GTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEA-----KLSPEAKDLISKLLC- 398
G +YEM+ PF + K+ N + E+A K SP +KD LL
Sbjct: 376 GVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 399 NVEQRLGTK--GADEIKAHPWFKGIEWDKL--YQIKAAFIPE--------VND--ELDTQ 444
+ E+RLG + D ++ HP F+ I W +L + F+P+ + D T
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTV 490
Query: 445 NFEKFEEADNQIQTSAKSG----PWRK 467
FE+AD + SG PW++
Sbjct: 491 KGVAFEKADTEFFQEFASGTCPIPWQE 517
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 74/387 (19%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ MG D F ++G+G FGEV C+ KATG +YA KKL K + +R + E+
Sbjct: 177 LEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD----TLTEEEARFYVG 224
+LA+V S IV L +F+ L L+M + GGD+ + D E A FY
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
+ V +E +H+ N I+RD+KP+N+LLD +G++++SD GL L + K ++
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA------ 350
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
GTP ++APE+LL + Y D+++L
Sbjct: 351 -----------------------------------GTPGFMAPELLLGEEYDFSVDYFAL 375
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEA-----KLSPEAKDLISKLLC- 398
G +YEM+ PF + K+ N + E+A K SP +KD LL
Sbjct: 376 GVTLYEMIAARGPF-----RARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQK 430
Query: 399 NVEQRLGTK--GADEIKAHPWFKGIEWDKL--YQIKAAFIPE--------VND--ELDTQ 444
+ E+RLG + D ++ HP F+ I W +L + F+P+ + D T
Sbjct: 431 DPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKCIQDVGAFSTV 490
Query: 445 NFEKFEEADNQIQTSAKSG----PWRK 467
FE+AD + SG PW++
Sbjct: 491 KGVAFEKADTEFFQEFASGTCPIPWQE 517
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 152/318 (47%), Gaps = 51/318 (16%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH 163
T + + K DDF+ + +GKG FG V + REK + A+K L KS++ + G
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E + + + I+++Y F D + +YL++E+ P G++ L + E+ + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
E A+ H+ IHRDIKP+NLL+ G +K++DFG +S+ +
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------WSVHA-- 164
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
P RR GT DY+ PE++ K + + D W
Sbjct: 165 ---------PSLRRRX------------------MCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQ 402
G + YE LVG PPF S T R+IVN LKFP LS +KDLISKLL + Q
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQ 253
Query: 403 RLGTKGADEIKAHPWFKG 420
RL KG E HPW K
Sbjct: 254 RLPLKGVME---HPWVKA 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 158/323 (48%), Gaps = 66/323 (20%)
Query: 106 YMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV---- 161
Y+R + K+G F+ + +G GA+GEV +C+EK A+K +KKS+ +G+
Sbjct: 26 YVRKKEGKIGESYFK-VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQ-FDKGRYSDDN 83
Query: 162 -------EHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL 214
E + E +LL +D I+KL+ F+D +Y YL+ E+ GG++ ++ +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 215 TEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNG---HMKLSDFGLCKPLDCSN 271
E +A + + + I +HKHN +HRDIKP+N+LL+ ++K+ DFGL S+
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL------SS 197
Query: 272 LQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL 331
KD+ + R+R +GT YIAPEV L
Sbjct: 198 FFSKDYKL-----------------------------RDR-------LGTAYYIAPEV-L 220
Query: 332 KKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKD 391
KK Y +CD WS G IMY +L GYPPF +K+ + + F + +S EAK+
Sbjct: 221 KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKE 280
Query: 392 LISKLL-------CNVEQRLGTK 407
LI +L C E+ L ++
Sbjct: 281 LIKLMLTYDYNKRCTAEEALNSR 303
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 151/318 (47%), Gaps = 51/318 (16%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH 163
T + + K DDF+ +GKG FG V + REK + A+K L KS++ + G
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E + + + I+++Y F D + +YL++E+ P G++ L + E+ + ++
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
E A+ H+ IHRDIKP+NLL+ G +K++DFG +S+ +
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------WSVHA-- 165
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
P RR GT DY+ PE++ K + + D W
Sbjct: 166 ---------PSLRRRX------------------MCGTLDYLPPEMIEGKTHDEKVDLWC 198
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQ 402
G + YE LVG PPF S T R+IVN LKFP LS +KDLISKLL + Q
Sbjct: 199 AGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQ 254
Query: 403 RLGTKGADEIKAHPWFKG 420
RL KG E HPW K
Sbjct: 255 RLPLKGVME---HPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 151/318 (47%), Gaps = 51/318 (16%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH 163
T + + K DDF+ +GKG FG V + REK + A+K L KS++ + G
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E + + + I+++Y F D + +YL++E+ P G++ L + E+ + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
E A+ H+ IHRDIKP+NLL+ G +K++DFG +S+ +
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------WSVHA-- 164
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
P RR GT DY+ PE++ K + + D W
Sbjct: 165 ---------PSLRRRX------------------MCGTLDYLPPEMIEGKTHDEKVDLWC 197
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQ 402
G + YE LVG PPF S T R+IVN LKFP LS +KDLISKLL + Q
Sbjct: 198 AGVLCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQ 253
Query: 403 RLGTKGADEIKAHPWFKG 420
RL KG E HPW K
Sbjct: 254 RLPLKGVME---HPWVKA 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 149/308 (48%), Gaps = 52/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ + +G GA+GEV +C++K TG A+K +KKS + + E +L ++D
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KLY F+D YL+ME GG++ ++ + +E +A + + + +HK
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
HN +HRD+KP+NLLL+ R+ +K+ DFGL F +G + L
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAH----------FEVGGKMKERL----- 167
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
GT YIAPEVL KK Y +CD WS G I+Y +L
Sbjct: 168 ---------------------------GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILL 199
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVE--QRLGTKGAD 410
GYPPF +++ + P+ ++S EAK L+ KL+ E +R+ A+
Sbjct: 200 CGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV-KLMLTYEPSKRI---SAE 255
Query: 411 EIKAHPWF 418
E HPW
Sbjct: 256 EALNHPWI 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 46/282 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ ++GKG+F V TG A+K + K M + G V+ V+ E + ++
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIESIHK 235
I++LY F+D Y+YL++E G+M L R +E EAR ++ + + + +H
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
H +HRD+ NLLL RN ++K++DFGL
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGL-------------------------------- 158
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
Q ++ H + Y+ GTP+YI+PE+ + +G+E D WSLG + Y +L+G
Sbjct: 159 ---ATQLKMPHEKH------YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
PPF +D +T K+V + + LS EAKDLI +LL
Sbjct: 210 PPFDTDTVKNTLNKVVLA----DYEMPSFLSIEAKDLIHQLL 247
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 52/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ + +G GA+GEV +C++K TG A+K +KKS + + E +L ++D
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KLY F+D YL+ME GG++ ++ + +E +A + + + +HK
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
HN +HRD+KP+NLLL+ R+ +K+ DFGL F +G +
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGL----------SAHFEVGGKM--------- 180
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+E+L GT YIAPEVL KK Y +CD WS G I+Y +L
Sbjct: 181 --------KERL---------------GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILL 216
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVE--QRLGTKGAD 410
GYPPF +++ + P+ ++S EAK L+ KL+ E +R+ A+
Sbjct: 217 CGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV-KLMLTYEPSKRI---SAE 272
Query: 411 EIKAHPWF 418
E HPW
Sbjct: 273 EALNHPWI 280
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 50/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ ++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KLY F+D Y YL+ E GG++ ++ + +E +A + + + I +HK
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+KP+NLLL+ ++ ++++ DFGL
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------------------------- 199
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 200 ------------THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 244
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV-EQRLGTKGADE 411
G PPF +K+ + + P+ K+S AKDLI K+L V R+ + A +
Sbjct: 245 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 304
Query: 412 IKAHPWFK 419
H W +
Sbjct: 305 ---HEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 50/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ ++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KLY F+D Y YL+ E GG++ ++ + +E +A + + + I +HK
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+KP+NLLL+ ++ ++++ DFGL
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------------------------- 200
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 201 ------------THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 245
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV-EQRLGTKGADE 411
G PPF +K+ + + P+ K+S AKDLI K+L V R+ + A +
Sbjct: 246 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 305
Query: 412 IKAHPWFK 419
H W +
Sbjct: 306 ---HEWIQ 310
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 50/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ ++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KLY F+D Y YL+ E GG++ ++ + +E +A + + + I +HK
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+KP+NLLL+ ++ ++++ DFGL
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------------------------- 176
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 177 ------------THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV-EQRLGTKGADE 411
G PPF +K+ + + P+ K+S AKDLI K+L V R+ + A +
Sbjct: 222 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281
Query: 412 IKAHPWFK 419
H W +
Sbjct: 282 ---HEWIQ 286
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 146/305 (47%), Gaps = 51/305 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ +GKG FG V + RE+ + + A+K L K+++ + G ++ E + + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL NG +K++DFG +S+ + S
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFG--------------WSVHAPSS------------ 165
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 166 RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF + T R+I R FP+ ++ A+DLIS+LL N QRL E+ H
Sbjct: 209 PFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLTLA---EVLEH 261
Query: 416 PWFKG 420
PW K
Sbjct: 262 PWIKA 266
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 50/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ ++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KLY F+D Y YL+ E GG++ ++ + +E +A + + + I +HK
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 150
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+KP+NLLL+ ++ ++++ DFGL
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLS---------------------------- 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
H++ +++M +GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 183 ------------THFEASKKM--KDKIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 227
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV-EQRLGTKGADE 411
G PPF +K+ + + P+ K+S AKDLI K+L V R+ + A +
Sbjct: 228 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 287
Query: 412 IKAHPWFK 419
H W +
Sbjct: 288 ---HEWIQ 292
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 151/305 (49%), Gaps = 51/305 (16%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
++ + +G GA+GEV +CR+K T A+K ++K+ + + ++ E +L +D
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPN 97
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
I+KLY F+D YL+ME GG++ ++ + E +A + + + + +HKHN
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI 157
Query: 239 IHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
+HRD+KP+NLLL +++ +K+ DFGL +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--------------------------- 190
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
++ +E+L GT YIAPEVL KK Y +CD WS+G I++ +L GY
Sbjct: 191 NQKKMKERL---------------GTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGY 234
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKA 414
PPF RK+ + PE +S AKDLI ++L + ++R+ + A E
Sbjct: 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE--- 291
Query: 415 HPWFK 419
HPW K
Sbjct: 292 HPWIK 296
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 145/305 (47%), Gaps = 51/305 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DF+ +GKG FG V + RE+ + + A+K L K+++ + G ++ E + + +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL NG +K++DFG +S+ + P +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFG--------------WSVHA-----------PSSR 166
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
R T GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 167 RDT------------------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMP 208
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF + T R+I R FP+ ++ A+DLIS+LL N QRL E+ H
Sbjct: 209 PFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLTLA---EVLEH 261
Query: 416 PWFKG 420
PW K
Sbjct: 262 PWIKA 266
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 51/313 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G++ L + E+ Y+ E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS-- 166
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
RRT + GT DY+ PE++ + + + D WSLG
Sbjct: 167 ----------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 255
Query: 406 TKGADEIKAHPWF 418
+ E+ HPW
Sbjct: 256 LR---EVLEHPWI 265
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 148/308 (48%), Gaps = 50/308 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ ++GKG+FGEV +C++K TG A+K + K ++ ++ E + E LL ++D
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I KLY F+D Y YL+ E GG++ ++ + +E +A + + + I HK
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 236 HNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+KP+NLLL+ ++ ++++ DFGL + S + KD
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK-KXKD---------------- 187
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+GT YIAPEV L Y +CD WS G I+Y +L
Sbjct: 188 -------------------------KIGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILL 221
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV-EQRLGTKGADE 411
G PPF +K+ + + P+ K+S AKDLI K L V R+ + A +
Sbjct: 222 SGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALD 281
Query: 412 IKAHPWFK 419
H W +
Sbjct: 282 ---HEWIQ 286
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 154/308 (50%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER--NLLAE 173
DD++ +GKGAF VR C +K YA K + ++ R +H K ER +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR---DHQKLEREARICRL 86
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI 233
+ IV+L+ S ++ + YL+ + + GG++ ++ ++ +E +A + + + ++ I
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 234 HKHNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
H+H+ +HRD+KP+NLLL + +KL+DFGL A++
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGL----------------------AIEVQ 184
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
G EQ Q W + GTP Y++PEVL K YG D W+ G I+Y
Sbjct: 185 G----------EQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYI 225
Query: 351 MLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGA 409
+LVGYPPF+ ++ ++I PE ++PEAK+LI+++L N +R+ A
Sbjct: 226 LLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI---TA 282
Query: 410 DEIKAHPW 417
D+ HPW
Sbjct: 283 DQALKHPW 290
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 49/307 (15%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A+ + + M+GKG+FGEV C+++ T YA+K + K+ + + E LL ++D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD 79
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KL+ +D Y++ E GG++ ++++ +E +A + + I +HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 236 HNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
HN +HRD+KP+N+LL +++ +K+ DFGL C
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLST---C----------------------- 173
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+Q+N +M +GT YIAPEV L+ Y +CD WS G I+Y +L
Sbjct: 174 --------------FQQNTKM--KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEI 412
G PPFY +++ + P+ +S +AKDLI K+L T A +
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT--ATQC 274
Query: 413 KAHPWFK 419
HPW +
Sbjct: 275 LEHPWIQ 281
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS----- 187
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 188 -------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 223
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 224 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 278
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 279 --EVLEHPWI 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS----- 178
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 179 -------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 214
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 215 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 269
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 270 --EVLEHPWI 277
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 153/314 (48%), Gaps = 58/314 (18%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK-KSEMLRRGQVEHVKA----ERNLLAE 173
++P +IG+G VR C +ATGH +A+K ++ +E L Q+E V+ E ++L +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 174 VDSNC-IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
V + I+ L S++ +++L+ + + G++ L K L+E+E R + + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSF 215
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H +N +HRD+KP+N+LLD N ++LSDFG C
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFG----FSC----------------------- 248
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL------LKKGYGMECDWWSLGA 346
L+ ++ R + GTP Y+APE+L GYG E D W+ G
Sbjct: 249 ----------HLEPGEKLREL-----CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
I++ +L G PPF+ + R I+ + PE S KDLIS+LL + E RL
Sbjct: 294 ILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARL- 352
Query: 406 TKGADEIKAHPWFK 419
A++ HP+F+
Sbjct: 353 --TAEQALQHPFFE 364
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 51/313 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G++ L + E+ Y+ E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSV------- 161
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 162 -------------------HAPSSRRX---XLXGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 255
Query: 406 TKGADEIKAHPWF 418
+ E+ HPW
Sbjct: 256 LR---EVLEHPWI 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 51/313 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G + L + E+ Y+ E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS-- 166
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
RRT + GT DY+ PE++ + + + D WSLG
Sbjct: 167 ----------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 200 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 255
Query: 406 TKGADEIKAHPWF 418
+ E+ HPW
Sbjct: 256 LR---EVLEHPWI 265
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 149/313 (47%), Gaps = 51/313 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G + L + E+ Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS-- 164
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
RRT + GT DY+ PE++ + + + D WSLG
Sbjct: 165 ----------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 406 TKGADEIKAHPWF 418
+ E+ HPW
Sbjct: 254 LR---EVLEHPWI 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 147/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS----- 166
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT + GT DY+ PE + + + + D WSLG + Y
Sbjct: 167 -------RRT-----------------TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCY 202
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPXLR- 257
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 258 --EVLEHPWI 265
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 152/307 (49%), Gaps = 53/307 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER--NLLAEV 174
D+++ IGKGAF VR C + TGH YA K + ++ R +H K ER + +
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR---DHQKLEREARICRLL 60
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ IV+L+ S ++ + YL+ + + GG++ ++ ++ +E +A + + + A+ H
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 235 KHNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ +HRD+KP+NLLL + +KL+DFGL A++ G
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGL----------------------AIEVQG 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
Q W + GTP Y++PEVL K+ YG D W+ G I+Y +
Sbjct: 159 DQ-----------QAW--------FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYIL 199
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD 410
LVGYPPF+ ++ ++I PE ++PEAK+LI+++L N +R+ A
Sbjct: 200 LVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI---TAH 256
Query: 411 EIKAHPW 417
E HPW
Sbjct: 257 EALKHPW 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 51/315 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G + L + E+ Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS-- 164
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
RRT + GT DY+ PE++ + + + D WSLG
Sbjct: 165 ----------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 406 TKGADEIKAHPWFKG 420
+ E+ HPW
Sbjct: 254 LR---EVLEHPWITA 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 145/310 (46%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG C
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG----WSC-------------------- 157
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
H +RR + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 158 ----------------HAPSSRRT---TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 199 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 253
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 254 --EVLEHPWI 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 161
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT+ GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 162 RRTE-----------------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWF 418
PW
Sbjct: 258 PWI 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 161
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 162 RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWF 418
PW
Sbjct: 258 PWI 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSV---------- 182
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 183 ----------------HAPSSRRD---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 223
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 224 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 278
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 279 --EVLEHPWI 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 53/308 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER--NLLAEV 174
D+++ +GKGAF VR C + TG YA K + ++ R +H K ER + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR---DHQKLEREARICRLL 60
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
IV+L+ S ++ + YL+ + + GG++ ++ ++ +E +A + + + ++ H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 235 KHNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ +HRD+KP+NLLL + +KL+DFGL A++ G
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGL----------------------AIEVQG 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 159 -----------DQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGTKGAD 410
LVGYPPF+ ++ ++I PE ++PEAKDLI+K+L N +R+ A
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI---TAS 256
Query: 411 EIKAHPWF 418
E HPW
Sbjct: 257 EALKHPWI 264
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 147/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS----- 162
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT GT DY+ PE++ + + + D WSLG + Y
Sbjct: 163 -------RRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 199 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 253
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 254 --EVLEHPWI 261
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 49/307 (15%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A+ + + M+GKG+FGEV C+++ T YA+K + K+ + + E LL ++D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD 79
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KL+ +D Y++ E GG++ ++++ +E +A + + I +HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 236 HNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
HN +HRD+KP+N+LL +++ +K+ DFGL C
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLST---C----------------------- 173
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+Q+N +M +GT YIAPEV L+ Y +CD WS G I+Y +L
Sbjct: 174 --------------FQQNTKM--KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEI 412
G PPFY +++ + P+ +S +AKDLI K+L T A +
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT--ATQC 274
Query: 413 KAHPWFK 419
HPW +
Sbjct: 275 LEHPWIQ 281
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFG--------------WSV----------------- 159
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 160 ---------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 208 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 260
Query: 416 PWF 418
PW
Sbjct: 261 PWI 263
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 49/307 (15%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A+ + + M+GKG+FGEV C+++ T YA+K + K+ + + E LL ++D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLD 79
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KL+ +D Y++ E GG++ ++++ +E +A + + I +HK
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 236 HNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
HN +HRD+KP+N+LL +++ +K+ DFGL C
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLST---C----------------------- 173
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
+Q+N +M +GT YIAPEV L+ Y +CD WS G I+Y +L
Sbjct: 174 --------------FQQNTKM--KDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEI 412
G PPFY +++ + P+ +S +AKDLI K+L T A +
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT--ATQC 274
Query: 413 KAHPWFK 419
HPW +
Sbjct: 275 LEHPWIQ 281
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 51/305 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 160
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 161 RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 203
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 204 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 256
Query: 416 PWFKG 420
PW
Sbjct: 257 PWITA 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSV---------- 158
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
H +RR GT DY+ PE++ + + + D WSLG + Y
Sbjct: 159 ----------------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 199
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 200 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 254
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 255 --EVLEHPWI 262
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 147/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS----- 161
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT GT DY+ PE++ + + + D WSLG + Y
Sbjct: 162 -------RRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 197
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 198 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 252
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 253 --EVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 147/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS----- 166
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT GT DY+ PE++ + + + D WSLG + Y
Sbjct: 167 -------RRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 257
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 258 --EVLEHPWI 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 145/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 165
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 166 RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 208
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 209 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 261
Query: 416 PWF 418
PW
Sbjct: 262 PWI 264
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 51/305 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 161
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 162 RRT-----------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWFKG 420
PW
Sbjct: 258 PWITA 262
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 49/305 (16%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
FE +G GAF EV + EKATG ++A+K + K + +G+ ++ E +L ++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IV L ++ +LYL+M+ + GG++ ++ K TE++A + + + A+ +H+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 239 IHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
+HRD+KP+NLL D + +SDFGL K ++ G ++
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSK---------------------MEGKGDVMS 180
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
+ GTP Y+APEVL +K Y D WS+G I Y +L GY
Sbjct: 181 ---------------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAH 415
PPFY + +I+ P +S AKD I L+ + T ++ H
Sbjct: 220 PPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYT--CEQAARH 277
Query: 416 PWFKG 420
PW G
Sbjct: 278 PWIAG 282
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 144/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFG--------------WSV----------------- 156
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 157 ---------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQDTYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWF 418
PW
Sbjct: 258 PWI 260
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 53/306 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F + ++G GAF EV + +++ TG ++A+K +KKS R +E+ E +L ++
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIKHEN 67
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IV L ++ + YL+M+ + GG++ ++ + TE++A + + + A++ +H++
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 239 IHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
+HRD+KP+NLL + N + ++DFGL K ++ +G
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSK---------------------MEQNG---- 162
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
+ + GTP Y+APEVL +K Y D WS+G I Y +L GY
Sbjct: 163 ------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY 204
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKA 414
PPFY + KI + P +S AKD I LL + +R + A +
Sbjct: 205 PPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKA---LS 261
Query: 415 HPWFKG 420
HPW G
Sbjct: 262 HPWIDG 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 148/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K+++FG +S+ + S
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFG--------------WSVHAPSS----- 163
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
RRT + GT DY+ PE++ + + + D WSLG + Y
Sbjct: 164 -------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 199
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 200 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 254
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 255 --EVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 51/315 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G + L + E+ Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K+++FG +S+ + S
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG--------------WSVHAPSS-- 164
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
RRT + GT DY+ PE++ + + + D WSLG
Sbjct: 165 ----------RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 406 TKGADEIKAHPWFKG 420
+ E+ HPW
Sbjct: 254 LR---EVLEHPWITA 265
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 51/310 (16%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++ E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
+ + + I++LY F D +YLI+EY P G + L + E+ Y+ E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H IHRDIKP+NLLL G +K++DFG +S+ +
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHA-------- 159
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
P + R T GT DY+ PE++ + + + D WSLG + Y
Sbjct: 160 ---PSSRRDT------------------LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 198
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKG 408
E LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR +
Sbjct: 199 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR- 253
Query: 409 ADEIKAHPWF 418
E+ HPW
Sbjct: 254 --EVLEHPWI 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 51/305 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG--------------WSV----------------- 156
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
H +RR + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 157 ---------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWFKG 420
PW
Sbjct: 258 PWITA 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 147/313 (46%), Gaps = 51/313 (16%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M ++ + +DFE +GKG FG V + REK + + A+K L K+++ + G ++
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
E + + + I++LY F D +YLI+EY P G + L + E+ Y+ E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
A+ H IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------WSV------- 159
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
H +RR GT DY+ PE++ + + + D WSLG
Sbjct: 160 -------------------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLG 405
+ YE LVG PPF ++ T ++I R FP+ ++ A+DLIS+LL N QR
Sbjct: 198 LCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM 253
Query: 406 TKGADEIKAHPWF 418
+ E+ HPW
Sbjct: 254 LR---EVLEHPWI 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 144/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 161
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 162 RRT-----------------XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWF 418
PW
Sbjct: 258 PWI 260
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 149/308 (48%), Gaps = 53/308 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER--NLLAEV 174
D+++ +GKGAF VR C + TG YA K + ++ R +H K ER + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR---DHQKLEREARICRLL 60
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
IV+L+ S ++ + YL+ + + GG++ ++ ++ +E +A + + + ++ H
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 235 KHNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ +HRD+KP+NLLL + +KL+DFGL A++ G
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGL----------------------AIEVQG 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 159 -----------DQQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYIL 199
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD 410
LVGYPPF+ ++ ++I PE ++PEAKDLI+K+L N +R+ A
Sbjct: 200 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI---TAS 256
Query: 411 EIKAHPWF 418
E HPW
Sbjct: 257 EALKHPWI 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 144/305 (47%), Gaps = 51/305 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + A+K L K+++ + G ++ E + + +
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+ + S
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS------------ 158
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
RRT + GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 159 RRT-----------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 201
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 202 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 254
Query: 416 PWFKG 420
PW
Sbjct: 255 PWITA 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG--------------WSV----------------- 156
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 157 ---------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 205 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 257
Query: 416 PWF 418
PW
Sbjct: 258 PWI 260
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 151/313 (48%), Gaps = 52/313 (16%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
L RH DDFE +GKG FG V + REK + + A+K L KS++ + G ++ E
Sbjct: 16 LTRH-FTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+ A + I++LY F D +YLI+EY P G++ L + T E+ + E
Sbjct: 75 EIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD 134
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
A+ H IHRDIKP+NLLL G +K++DFG +S+ +
Sbjct: 135 ALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG--------------WSVHA------- 173
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
P R+T GT DY+ PE++ + + + D W +G +
Sbjct: 174 ----PSLRRKTM------------------CGTLDYLPPEMIEGRMHNEKVDLWCIGVLC 211
Query: 349 YEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTK 407
YE+LVG PPF S T R+IV + LKFP A + A+DLISKLL N +RL
Sbjct: 212 YELLVGNPPFESASHNETYRRIV--KVDLKFP--ASVPTGAQDLISKLLRHNPSERLPLA 267
Query: 408 GADEIKAHPWFKG 420
++ AHPW +
Sbjct: 268 ---QVSAHPWVRA 277
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 51/303 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+DFE +GKG FG V + REK + + A+K L K+++ + G ++ E + + +
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++LY F D +YLI+EY P G + L + E+ Y+ E A+ H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
IHRDIKP+NLLL G +K++DFG +S+
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFG--------------WSV----------------- 159
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
H +RR GT DY+ PE++ + + + D WSLG + YE LVG P
Sbjct: 160 ---------HAPSSRRD---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAH 415
PF ++ T ++I R FP+ ++ A+DLIS+LL N QR + E+ H
Sbjct: 208 PFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPMLR---EVLEH 260
Query: 416 PWF 418
PW
Sbjct: 261 PWI 263
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 150/319 (47%), Gaps = 63/319 (19%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL----------KKSEMLRRGQVEHVKA 166
+++EP ++G+G VR C K T YA+K + ++ + LR ++ V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
R + + I++L +++ + + +L+ + + G++ L K TL+E+E R +
Sbjct: 77 LRKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ I ++HK N +HRD+KP+N+LLD + ++KL+DFG LD
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD------------------ 175
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL------KKGYGMECD 340
E+L+ S GTP Y+APE++ GYG E D
Sbjct: 176 -------------PGEKLR-----------SVCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
WS G IMY +L G PPF+ + M R I++ PE S KDL+S+ L
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
Query: 401 EQRLGTKGADEIKAHPWFK 419
Q+ T A+E AHP+F+
Sbjct: 272 PQKRYT--AEEALAHPFFQ 288
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 147/300 (49%), Gaps = 53/300 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER--NLLAEVDSNCIVKL 182
+GKGAF VR C + G YA K + ++ R +H K ER + + IV+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR---DHQKLEREARICRLLKHPNIVRL 86
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ S ++ + YLI + + GG++ ++ ++ +E +A + + + A+ H+ +HRD
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRD 146
Query: 243 IKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRT 299
+KP+NLLL + +KL+DFGL A++ +G
Sbjct: 147 LKPENLLLASKLKGAAVKLADFGL----------------------AIEVEG-------- 176
Query: 300 QQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY 359
EQ Q W + GTP Y++PEVL K YG D W+ G I+Y +LVGYPPF+
Sbjct: 177 --EQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFW 225
Query: 360 SDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWF 418
++ ++I PE ++PEAKDLI+K+L N +R+ A E HPW
Sbjct: 226 DEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI---TAAEALKHPWI 282
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 41/235 (17%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+DD+++Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFGL ++ ++KD
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------------------------- 203
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 204 ----------------GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 148/319 (46%), Gaps = 63/319 (19%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL----------KKSEMLRRGQVEHVKA 166
+++EP ++G+G VR C K T YA+K + ++ + LR ++ V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
R + + I++L +++ + + +L+ + + G++ L K TL+E+E R +
Sbjct: 77 LRKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ I ++HK N +HRD+KP+N+LLD + ++KL+DFG LD
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD------------------ 175
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL------KKGYGMECD 340
P +E GTP Y+APE++ GYG E D
Sbjct: 176 ---------PGEKLRE---------------VCGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
WS G IMY +L G PPF+ + M R I++ PE S KDL+S+ L
Sbjct: 212 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 271
Query: 401 EQRLGTKGADEIKAHPWFK 419
Q+ T A+E AHP+F+
Sbjct: 272 PQKRYT--AEEALAHPFFQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 148/319 (46%), Gaps = 63/319 (19%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL----------KKSEMLRRGQVEHVKA 166
+++EP ++G+G VR C K T YA+K + ++ + LR ++ V
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
R + + I++L +++ + + +L+ + + G++ L K TL+E+E R +
Sbjct: 64 LRKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ I ++HK N +HRD+KP+N+LLD + ++KL+DFG LD
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD------------------ 162
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL------KKGYGMECD 340
P +E GTP Y+APE++ GYG E D
Sbjct: 163 ---------PGEKLRE---------------VCGTPSYLAPEIIECSMNDNHPGYGKEVD 198
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
WS G IMY +L G PPF+ + M R I++ PE S KDL+S+ L
Sbjct: 199 MWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQ 258
Query: 401 EQRLGTKGADEIKAHPWFK 419
Q+ T A+E AHP+F+
Sbjct: 259 PQKRYT--AEEALAHPFFQ 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 41/235 (17%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+DD+++Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFGL ++ ++KD
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC------------------------- 187
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 188 ----------------GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK S RRG E ++ E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L +K++L+EEEA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLD+N H+KL DFGL ++ DG
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------------DGVEFK-- 176
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 177 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLCN-VEQRLGTKGADEIKA 414
F D T I F EE ++ S AKD I KLL +RL + E
Sbjct: 218 FLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ---EALR 272
Query: 415 HPWFKGIE 422
HPW ++
Sbjct: 273 HPWITPVD 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 146/319 (45%), Gaps = 59/319 (18%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEML--RRG-QVEHVKAERNL 170
M D +E +G G F VR CR+K TG YA K +KK + RRG E ++ E N+
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
L E+ I+ L+ F++ + LI+E + GG++ L K++LTE+EA ++ + + +
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 231 ESIHKHNYIHRDIKPDNL-LLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+H H D+KP+N+ LLD+ N +KL DFG+ ++ N + F
Sbjct: 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--------- 172
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
GTP+++APE++ + G+E D WS+G
Sbjct: 173 ---------------------------------GTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLCNVEQ 402
I Y +L G PF + T I VN+ F EE + S AKD I +LL +
Sbjct: 200 ITYILLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLVKDPK 255
Query: 403 RLGTKGADEIKAHPWFKGI 421
R T H W K I
Sbjct: 256 RRMTIAQS--LEHSWIKAI 272
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK S RRG E ++ E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L +K++L+EEEA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLD+N H+KL DFGL ++ DG
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------------DGVEFK-- 176
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 177 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLCN-VEQRLGTKGADEIKA 414
F D T I + F EE + S AKD I KLL +RL + E
Sbjct: 218 FLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ---EALR 272
Query: 415 HPWFKGIE 422
HPW ++
Sbjct: 273 HPWITPVD 280
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK S RRG E ++ E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L +K++L+EEEA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLD+N H+KL DFGL ++ DG
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------------DGVEFK-- 176
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 177 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLCN-VEQRLGTKGADEIKA 414
F D T I F EE ++ S AKD I KLL +RL + E
Sbjct: 218 FLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ---EALR 272
Query: 415 HPWFKGIE 422
HPW ++
Sbjct: 273 HPWITPVD 280
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK S RRG E ++ E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L +K++L+EEEA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLD+N H+KL DFGL ++ DG
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------------DGVEFK-- 176
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 177 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLCN-VEQRLGTKGADEIKA 414
F D T I + F EE + S AKD I KLL +RL + E
Sbjct: 218 FLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ---EALR 272
Query: 415 HPWFKGIE 422
HPW ++
Sbjct: 273 HPWITPVD 280
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 146/308 (47%), Gaps = 57/308 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRGQV-EHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK S RRG E ++ E ++L +V I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L +K++L+EEEA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLD+N H+KL DFGL ++ DG
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------------DGVEFK-- 176
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 177 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLCN-VEQRLGTKGADEIKA 414
F D T I F EE ++ S AKD I KLL +RL + E
Sbjct: 218 FLGDTKQETLANITA--VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQ---EALR 272
Query: 415 HPWFKGIE 422
HPW ++
Sbjct: 273 HPWITPVD 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 147/308 (47%), Gaps = 57/308 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK S RRG E ++ E ++L +V + ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L +K++L+EEEA ++ + + + +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLD+N H+KL DFGL ++ DG
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE---------------------DGVEFK-- 176
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+ GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 177 -------------------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLCN-VEQRLGTKGADEIKA 414
F D T I + F EE + S AKD I KLL +RL + E
Sbjct: 218 FLGDTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQ---EALR 272
Query: 415 HPWFKGIE 422
HPW ++
Sbjct: 273 HPWITPVD 280
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 63/330 (19%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEML--RRG-Q 160
TE + Q M D +E +G G F VR CR+K TG YA K +KK + RRG
Sbjct: 15 TENLYFQ--SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVS 72
Query: 161 VEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEAR 220
E ++ E N+L E+ I+ L+ F++ + LI+E + GG++ L K++LTE+EA
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 221 FYVGETVLAIESIHKHNYIHRDIKPDN-LLLDR---NGHMKLSDFGLCKPLDCSNLQEKD 276
++ + + + +H H D+KP+N +LLD+ N +KL DFG+ ++ N +
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI 192
Query: 277 FSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYG 336
F GTP+++APE++ + G
Sbjct: 193 F------------------------------------------GTPEFVAPEIVNYEPLG 210
Query: 337 MECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDL 392
+E D WS+G I Y +L G PF + T I VN+ F EE + S AKD
Sbjct: 211 LEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDF 266
Query: 393 ISKLLC-NVEQRLGTKGADEIKAHPWFKGI 421
I +LL + ++R+ + E H W K I
Sbjct: 267 IRRLLVKDPKRRMXIAQSLE---HSWIKAI 293
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 121/235 (51%), Gaps = 41/235 (17%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+DD+++Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFGL + ++ DG
Sbjct: 169 KLGNLFLNDDMDVKIGDFGL--------------------ATKIEFDG------------ 196
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
+R + + GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 197 ----ERKKTL-----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI+E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DIKPDN-LLLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N +LLDRN +K+ DFGL +D N + F
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 179 ----------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 413 KAHPWFK 419
HPW K
Sbjct: 272 --HPWIK 276
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 121/235 (51%), Gaps = 41/235 (17%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E + +D+ +V +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+DD+++Y+++E ++ L R+ +TE EAR+++ +T+ ++ +H + IHRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFGL + ++ DG
Sbjct: 169 KLGNLFLNDDMDVKIGDFGL--------------------ATKIEFDG------------ 196
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
+R + + GTP+YIAPEVL KKG+ E D WSLG I+Y +LVG PPF
Sbjct: 197 ----ERKKXL-----CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DIKPDN-LLLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N +LLDRN +K+ DFGL +D N + F
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 179 ----------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 413 KAHPWFK 419
HPW K
Sbjct: 272 --HPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 179 ----------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 413 KAHPWFK 419
HPW K
Sbjct: 272 --HPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI+E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 150/322 (46%), Gaps = 76/322 (23%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLR-----------------------RGQV 161
IGKG++G V++ + YAMK L K +++R RG +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 162 EHVKAERNLLAEVDSNCIVKLYCSFQD--DEYLYLIMEYLPGGDMMTLLMRKDTLTEEEA 219
E V E +L ++D +VKL D +++LY++ E + G +M + K L+E++A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQA 139
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
RFY + + IE +H IHRDIKP NLL+ +GH+K++DFG+ S+
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-------- 191
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL---LKKGYG 336
AL S+ TVGTP ++APE L K G
Sbjct: 192 ------ALLSN---------------------------TVGTPAFMAPESLSETRKIFSG 218
Query: 337 MECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKL 396
D W++G +Y + G PF + M KI + L+FP++ ++ + KDLI+++
Sbjct: 219 KALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKS--QALEFPDQPDIAEDLKDLITRM 276
Query: 397 LC-NVEQRLGTKGADEIKAHPW 417
L N E R+ EIK HPW
Sbjct: 277 LDKNPESRIVVP---EIKLHPW 295
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI+E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 150/308 (48%), Gaps = 53/308 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER--NLLAEV 174
++++ +GKGAF VR C + G YA + ++ R +H K ER + +
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR---DHQKLEREARICRLL 67
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
IV+L+ S ++ + YLI + + GG++ ++ ++ +E +A + + + A+ H
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 235 KHNYIHRDIKPDNLLLD---RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ +HR++KP+NLLL + +KL+DFGL A++ +G
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGL----------------------AIEVEG 165
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
EQ Q W + GTP Y++PEVL K YG D W+ G I+Y +
Sbjct: 166 ----------EQ-QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 206
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGAD 410
LVGYPPF+ ++ ++I PE ++PEAKDLI+K+L N +R+ A
Sbjct: 207 LVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI---TAA 263
Query: 411 EIKAHPWF 418
E HPW
Sbjct: 264 EALKHPWI 271
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 177
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 178 ----------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 216 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 270
Query: 413 KAHPWFK 419
HPW K
Sbjct: 271 --HPWIK 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DIKPDN-LLLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N +LLDRN +K+ DFGL +D N + F
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 179 ----------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 413 KAHPWFK 419
HPW K
Sbjct: 272 --HPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI+E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 150/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 177
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP+++APE++ + G+E D WS+G I Y +L G P
Sbjct: 178 ----------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 216 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 270
Query: 413 KAHPWFK 419
HPW K
Sbjct: 271 --HPWIK 275
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 51/308 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D ++ ++G GAF EV + +K T + A+K + K + G+ ++ E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
IV L ++ +LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 237 NYIHRDIKPDNLL---LDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+HRD+KP+NLL LD + + +SDFGL K D GS LS A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP----------GSVLSTA------- 178
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 353
GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 179 -------------------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEI 412
GYPPFY + +I+ P +S AKD I L+ + E+R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 413 KAHPWFKG 420
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 45/274 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+D++++++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFG L+ ++ DG
Sbjct: 148 KLGNLFLNEDLEVKIGDFG--------------------LATKVEYDG------------ 175
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+R + + GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF +
Sbjct: 176 ----ERKKTL-----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 226
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
T +I + P+ ++P A LI K+L
Sbjct: 227 KETYLRI--KKNEYSIPKH--INPVAASLIQKML 256
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI+E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI+E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 149/307 (48%), Gaps = 61/307 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEHVKAERNLLAEVDSNCIVK 181
+G G F V+ CREK+TG YA K +KK ++ RRG E ++ E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ +++ + LI+E + GG++ L K++LTEEEA ++ + + + +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 242 DIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
GTP ++APE++ + G+E D WS+G I Y +L G P
Sbjct: 179 ----------------------GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 358 FYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEI 412
F D T + VN+ +F +E + S AKD I +LL + ++R+ + + +
Sbjct: 217 FLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ- 271
Query: 413 KAHPWFK 419
HPW K
Sbjct: 272 --HPWIK 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 51/308 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D ++ ++G GAF EV + +K T + A+K + K + G+ ++ E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
IV L ++ +LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 237 NYIHRDIKPDNLL---LDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+HRD+KP+NLL LD + + +SDFGL K D GS LS A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP----------GSVLSTA------- 178
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 353
GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 179 -------------------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEI 412
GYPPFY + +I+ P +S AKD I L+ + E+R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 413 KAHPWFKG 420
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 45/274 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+D++++++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFG L+ ++ DG
Sbjct: 144 KLGNLFLNEDLEVKIGDFG--------------------LATKVEYDG------------ 171
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+R + + GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF +
Sbjct: 172 ----ERKKTL-----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
T +I + P+ ++P A LI K+L
Sbjct: 223 KETYLRI--KKNEYSIPKH--INPVAASLIQKML 252
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 45/274 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+D++++++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFG L+ ++ DG
Sbjct: 144 KLGNLFLNEDLEVKIGDFG--------------------LATKVEYDG------------ 171
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+R + + GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF +
Sbjct: 172 ----ERKKTL-----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 222
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
T +I + P+ ++P A LI K+L
Sbjct: 223 KETYLRI--KKNEYSIPKH--INPVAASLIQKML 252
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 143/308 (46%), Gaps = 51/308 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D ++ ++G GAF EV + +K T + A+K + K + G+ ++ E +L ++
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKH 75
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
IV L ++ +LYLIM+ + GG++ ++ K TE +A + + + A++ +H
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 237 NYIHRDIKPDNLL---LDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+HRD+KP+NLL LD + + +SDFGL K D GS LS A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP----------GSVLSTA------- 178
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 353
GTP Y+APEVL +K Y D WS+G I Y +L
Sbjct: 179 -------------------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 213
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEI 412
GYPPFY + +I+ P +S AKD I L+ + E+R + A +
Sbjct: 214 GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ- 272
Query: 413 KAHPWFKG 420
HPW G
Sbjct: 273 --HPWIAG 278
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 45/274 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+D++++++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFG L+ ++ DG
Sbjct: 166 KLGNLFLNEDLEVKIGDFG--------------------LATKVEYDG------------ 193
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+R + + GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF +
Sbjct: 194 ----ERKKVL-----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 244
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
T +I + P+ ++P A LI K+L
Sbjct: 245 KETYLRI--KKNEYSIPKH--INPVAASLIQKML 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 45/274 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+D++++++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFG L+ ++ DG
Sbjct: 168 KLGNLFLNEDLEVKIGDFG--------------------LATKVEYDG------------ 195
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+R + + GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF +
Sbjct: 196 ----ERKKVL-----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 246
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
T +I + P+ ++P A LI K+L
Sbjct: 247 KETYLRI--KKNEYSIPKH--INPVAASLIQKML 276
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 136/274 (49%), Gaps = 45/274 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+GKG F + + T V+A K + KS +L+ Q E + E ++ + +V +
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F+D++++++++E ++ L R+ LTE EAR+Y+ + VL + +H++ IHRD+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K NL L+ + +K+ DFG L+ ++ DG
Sbjct: 142 KLGNLFLNEDLEVKIGDFG--------------------LATKVEYDG------------ 169
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+R + + GTP+YIAPEVL KKG+ E D WS+G IMY +LVG PPF +
Sbjct: 170 ----ERKKVL-----CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL 220
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
T +I + P+ ++P A LI K+L
Sbjct: 221 KETYLRI--KKNEYSIPKH--INPVAASLIQKML 250
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 140/301 (46%), Gaps = 51/301 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
++G GAF EV + +K T + A+K + K + G+ ++ E +L ++ IV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
++ +LYLIM+ + GG++ ++ K TE +A + + + A++ +H +HRD+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 244 KPDNLL---LDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
KP+NLL LD + + +SDFGL K D GS LS A
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSKMEDP----------GSVLSTA-------------- 178
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 360
GTP Y+APEVL +K Y D WS+G I Y +L GYPPFY
Sbjct: 179 ------------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
Query: 361 DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
+ +I+ P +S AKD I L+ + E+R + A + HPW
Sbjct: 221 ENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ---HPWIA 277
Query: 420 G 420
G
Sbjct: 278 G 278
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 60/312 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G++ E + C KAT YA+K + KS +R E ++ LL I+ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI---LLRYGQHPNIITLKD 88
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ D +++YL+ E + GG+++ ++R+ +E EA F + +E +H +HRD+K
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 245 PDNLL-LDRNGH---MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
P N+L +D +G+ +++ DFG K L
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL--------------------------------- 175
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY- 359
R L + T +++APEVL ++GY CD WSLG ++Y ML GY PF
Sbjct: 176 --------RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Query: 360 --SDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHP 416
SD P +I + + L +S AKDL+SK+L + QRL K ++ HP
Sbjct: 228 GPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK---QVLQHP 284
Query: 417 WFKGIEWDKLYQ 428
W + DKL Q
Sbjct: 285 WVT--QKDKLPQ 294
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 145/301 (48%), Gaps = 57/301 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G++GEV++ +K T A KK+ K + V+ K E ++ +D I++LY
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+F+D+ +YL+ME GG++ ++ K E +A + + + A+ HK N HRD+K
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 245 PDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
P+N L + +KL DFGL + +P RT+
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLA------------------------ARFKPGKMMRTK- 168
Query: 302 EQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSD 361
VGTP Y++P+V L+ YG ECD WS G +MY +L GYPPF +
Sbjct: 169 -----------------VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAP 210
Query: 362 EPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEIKAHPWF 418
KI FPE+ +SP+A+ LI +LL + +QR+ + A E H WF
Sbjct: 211 TDXEVMLKIRE--GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE---HEWF 265
Query: 419 K 419
+
Sbjct: 266 E 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 144/301 (47%), Gaps = 57/301 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G++GEV++ +K T A KK+ K + V+ K E ++ +D I++LY
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+F+D+ +YL+ME GG++ ++ K E +A + + + A+ HK N HRD+K
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 150
Query: 245 PDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
P+N L + +KL DFGL +P RT+
Sbjct: 151 PENFLFLTDSPDSPLKLIDFGLAARF------------------------KPGKMMRTK- 185
Query: 302 EQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSD 361
VGTP Y++P+V L+ YG ECD WS G +MY +L GYPPF +
Sbjct: 186 -----------------VGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAP 227
Query: 362 EPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEIKAHPWF 418
KI FPE+ +SP+A+ LI +LL + +QR+ + A E H WF
Sbjct: 228 TDXEVMLKIRE--GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE---HEWF 282
Query: 419 K 419
+
Sbjct: 283 E 283
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 156/325 (48%), Gaps = 61/325 (18%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG-QVEH 163
M + R + D ++ +G G F V+ CREK+TG YA K +KK ++ RRG E
Sbjct: 1 MTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
++ E ++L E+ ++ L+ +++ + LI E + GG++ L K++LTEEEA ++
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 224 GETVLAIESIHKHNYIHRDIKPDNL-LLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSI 279
+ + + +H H D+KP+N+ LLDRN +K+ DFGL +D N + F
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-- 178
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
GTP+++APE++ + G+E
Sbjct: 179 ----------------------------------------GTPEFVAPEIVNYEPLGLEA 198
Query: 340 DWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISK 395
D WS+G I Y +L G PF D T + VN+ +F +E + S AKD I +
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRR 254
Query: 396 LLC-NVEQRLGTKGADEIKAHPWFK 419
LL + ++R+ + + + HPW K
Sbjct: 255 LLVKDPKKRMTIQDSLQ---HPWIK 276
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 145/312 (46%), Gaps = 60/312 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G++ E + C KAT YA+K + KS +R E ++ LL I+ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI---LLRYGQHPNIITLKD 88
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ D +++YL+ E + GG+++ ++R+ +E EA F + +E +H +HRD+K
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 245 PDNLL-LDRNGH---MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
P N+L +D +G+ +++ DFG K L
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL--------------------------------- 175
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY- 359
R L + T +++APEVL ++GY CD WSLG ++Y ML GY PF
Sbjct: 176 --------RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN 227
Query: 360 --SDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHP 416
SD P +I + + L +S AKDL+SK+L + QRL K ++ HP
Sbjct: 228 GPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK---QVLQHP 284
Query: 417 WFKGIEWDKLYQ 428
W + DKL Q
Sbjct: 285 WVT--QKDKLPQ 294
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 148/316 (46%), Gaps = 61/316 (19%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEML--RRG-QVEHVKAERNLLAE 173
D +E +G G F VR CR+K TG YA K +KK + RRG E ++ E N+L E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI 233
+ I+ L+ F++ + LI+E + GG++ L K++LTE+EA ++ + + + +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 234 HKHNYIHRDIKPDN-LLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
H H D+KP+N +LLD+ N +KL DFG+ ++ N + F
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------------ 179
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
GTP+++APE++ + G+E D WS+G I Y
Sbjct: 180 ------------------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 350 EMLVGYPPFYSDEPMSTCRKI--VNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRL 404
+L G PF + T I VN+ F EE + S AKD I +LL + ++R+
Sbjct: 210 ILLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
Query: 405 GTKGADEIKAHPWFKG 420
+ E H W K
Sbjct: 266 XIAQSLE---HSWIKA 278
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 51/321 (15%)
Query: 102 KETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV 161
+ +E+M K +D+++ +GKGAF VR C K TG +A K + ++ R
Sbjct: 15 RGSEFMMNASTKF-SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DF 72
Query: 162 EHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF 221
+ ++ E + ++ IV+L+ S Q++ + YL+ + + GG++ ++ ++ +E +A
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFS 278
+ + + +I H + +HR++KP+NLLL + +KL+DFGL +
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--------------A 178
Query: 279 IGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME 338
I N S A W + GTP Y++PEVL K Y
Sbjct: 179 IEVNDSEA--------------------W--------HGFAGTPGYLSPEVLKKDPYSKP 210
Query: 339 CDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLI-SKLL 397
D W+ G I+Y +LVGYPPF+ ++ +I PE ++PEAK LI S L
Sbjct: 211 VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLT 270
Query: 398 CNVEQRLGTKGADEIKAHPWF 418
N ++R+ AD+ PW
Sbjct: 271 VNPKKRI---TADQALKVPWI 288
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 150/327 (45%), Gaps = 61/327 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G F +V++ TG + A+K + K+ + + +K E L + I +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ +++++EY PGG++ ++ +D L+EEE R + V A+ +H Y HRD+K
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLK 135
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
P+NLL D +KL DFGLC P+ + L
Sbjct: 136 PENLLFDEYHKLKLIDFGLC-----------------------------AKPKGNKDYHL 166
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDEP 363
Q + G+ Y APE++ K Y G E D WS+G ++Y ++ G+ PF D
Sbjct: 167 Q-----------TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV 215
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKG-- 420
M+ +KI+ K+ LSP + L+ ++L + ++R+ K + HPW
Sbjct: 216 MALYKKIMRG----KYDVPKWLSPSSILLLQQMLQVDPKKRISMKN---LLNHPWIMQDY 268
Query: 421 ---IEWDKLYQIKAAFIPEVNDELDTQ 444
+EW Q K FI ++D+ T+
Sbjct: 269 NYPVEW----QSKNPFI-HLDDDCVTE 290
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 60/321 (18%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
D +E IG G++ + C KAT +A+K + KS +R E ++ LL
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---KRDPTEEIEI---LLRYGQ 74
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+ L + D +Y+Y++ E + GG+++ ++R+ +E EA + +E +H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 236 HNYIHRDIKPDNLL-LDRNGH---MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+HRD+KP N+L +D +G+ +++ DFG K L N
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-------------------- 174
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
L + T +++APEVL ++GY CD WSLG ++Y M
Sbjct: 175 ---------------------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 352 LVGYPPFYS---DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTK 407
L GY PF + D P +I + + L +S AKDL+SK+L + QRL
Sbjct: 214 LTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL--- 270
Query: 408 GADEIKAHPWFKGIEWDKLYQ 428
A + HPW + WD+L Q
Sbjct: 271 TAALVLRHPWI--VHWDQLPQ 289
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 153/298 (51%), Gaps = 56/298 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAEVDSNCIVKL 182
+G+G+FG+V++ T A+K + + ++L++ + H++ ER + L + I+KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISR-QLLKKSDM-HMRVEREISYLKLLRHPHIIKL 74
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
Y + +++EY GG++ ++ K +TE+E R + + + AIE H+H +HRD
Sbjct: 75 YDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133
Query: 243 IKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQE 302
+KP+NLLLD N ++K++DFGL SN + +DG
Sbjct: 134 LKPENLLLDDNLNVKIADFGL------SN---------------IMTDGN---------- 162
Query: 303 QLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSD 361
++ G+P+Y APEV+ K Y G E D WS G ++Y MLVG PF D
Sbjct: 163 -----------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF-DD 210
Query: 362 EPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGTKGADEIKAHPWF 418
E + K VN ++ P+ LSP A+ LI +++ + QR+ + EI+ PWF
Sbjct: 211 EFIPNLFKKVNSCVYV-MPD--FLSPGAQSLIRRMIVADPMQRITIQ---EIRRDPWF 262
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 50/307 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D+++ +GKGAF VR C K TG +A K + ++ R + ++ E + ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 63
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+L+ S Q++ + YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 236 HNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HR++KP+NLLL + +KL+DFGL +I N S A
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGL--------------AIEVNDSEA------ 163
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 164 --------------W--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLI-SKLLCNVEQRLGTKGADE 411
VGYPPF+ ++ +I PE ++PEAK LI S L N ++R+ AD+
Sbjct: 202 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI---TADQ 258
Query: 412 IKAHPWF 418
PW
Sbjct: 259 ALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 50/307 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D+++ +GKGAF VR C K TG +A K + ++ R + ++ E + ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 63
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+L+ S Q++ + YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 236 HNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HR++KP+NLLL + +KL+DFGL +I N S A
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGL--------------AIEVNDSEA------ 163
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 164 --------------W--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLI-SKLLCNVEQRLGTKGADE 411
VGYPPF+ ++ +I PE ++PEAK LI S L N ++R+ AD+
Sbjct: 202 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI---TADQ 258
Query: 412 IKAHPWF 418
PW
Sbjct: 259 ALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 147/307 (47%), Gaps = 50/307 (16%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D+++ +GKGAF VR C K TG +A K + ++ R + ++ E + ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ 62
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+L+ S Q++ + YL+ + + GG++ ++ ++ +E +A + + + +I H
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 236 HNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HR++KP+NLLL + +KL+DFGL +I N S A
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGL--------------AIEVNDSEA------ 162
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
W + GTP Y++PEVL K Y D W+ G I+Y +L
Sbjct: 163 --------------W--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 200
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLI-SKLLCNVEQRLGTKGADE 411
VGYPPF+ ++ +I PE ++PEAK LI S L N ++R+ AD+
Sbjct: 201 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI---TADQ 257
Query: 412 IKAHPWF 418
PW
Sbjct: 258 ALKVPWI 264
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 59/312 (18%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D FE + +G+GA V C++K T YA+K LKK+ + V+ E +L +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLS 106
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+KL F+ + L++E + GG++ ++ K +E +A V + + A+ +H+
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 236 HNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+KP+NLL + +K++DFGL K ++
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE------------------------ 202
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++L + GTP Y APE+L YG E D WS+G I Y +L
Sbjct: 203 ------------------HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244
Query: 353 VGYPPFY---SDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-NVEQRLGTKG 408
G+ PFY D+ M R+I+N + P ++S AKDL+ KL+ + ++RL T
Sbjct: 245 CGFEPFYDERGDQFM--FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQ 302
Query: 409 ADEIKAHPWFKG 420
A + HPW G
Sbjct: 303 ALQ---HPWVTG 311
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 48/294 (16%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + REK +G A+K + + RR E + E ++ + +V++Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ E L+++ME+L GG +T ++ + L EE+ + A+ +H IHRDIK
Sbjct: 110 SYLVGEELWVLMEFLQGG-ALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + KD P+R
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQI------SKD------------------VPKRK----- 199
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ + Y E D WSLG ++ EM+ G PP++SD P+
Sbjct: 200 ------------XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV 247
Query: 365 STCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+++ + K K+SP +D + ++L Q T A E+ HP+
Sbjct: 248 QAMKRLRD-SPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT--AQELLDHPFL 298
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 141/298 (47%), Gaps = 50/298 (16%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
++G G FG+V C E ATG A K +K M + E VK E +++ ++D +++LY
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANLIQLY 152
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD-TLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+F+ + L+MEY+ GG++ ++ + LTE + ++ + I +H+ +H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 243 IKPDNLL-LDRNG-HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
+KP+N+L ++R+ +K+ DFGL + R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLAR-------------------------------RYKP 241
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 360
+E+L+ GTP+++APEV+ D WS+G I Y +L G PF
Sbjct: 242 REKLK-----------VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290
Query: 361 DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
D T I+ R L+ E +S EAK+ ISKLL ++++ A E HPW
Sbjct: 291 DNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLL--IKEKSWRISASEALKHPWL 346
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 142/309 (45%), Gaps = 55/309 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D +E + IG G FG R+ R+K + + A+K +++ E + E+VK E +
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLR 72
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+ +L ++MEY GG++ + +E+EARF+ + + + H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 236 HNYIHRDIKPDNLLLDRNG--HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
HRD+K +N LLD + +K+ DFG K S L S +
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------------------SSVLHSQPK- 173
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
STVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 174 -----------------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 210
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKF--PEEAKLSPEAKDLISKL-LCNVEQRLGTKGA 409
VG PF E RK ++ ++++ P+ +SPE + LIS++ + + +R+
Sbjct: 211 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 268
Query: 410 DEIKAHPWF 418
EI+ H WF
Sbjct: 269 -EIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 140/309 (45%), Gaps = 55/309 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D +E + IG G FG R+ R+K + + A+K +++ E + + R+L
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL----R 73
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+ +L ++MEY GG++ + +E+EARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 236 HNYIHRDIKPDNLLLDRNG--HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
HRD+K +N LLD + +K+ DFG K S L S +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK------------------SSVLHSQPK- 174
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
STVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 175 -----------------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKF--PEEAKLSPEAKDLISKL-LCNVEQRLGTKGA 409
VG PF E RK ++ ++++ P+ +SPE + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 410 DEIKAHPWF 418
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 143/321 (44%), Gaps = 60/321 (18%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
D +E IG G++ + C KAT +A+K + KS +R E ++ LL
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS---KRDPTEEIEI---LLRYGQ 74
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
I+ L + D +Y+Y++ E GG+++ ++R+ +E EA + +E +H
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 236 HNYIHRDIKPDNLL-LDRNGH---MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+HRD+KP N+L +D +G+ +++ DFG K L N
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-------------------- 174
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
L + T +++APEVL ++GY CD WSLG ++Y
Sbjct: 175 ---------------------GLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTX 213
Query: 352 LVGYPPFYS---DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTK 407
L GY PF + D P +I + + L +S AKDL+SK L + QRL
Sbjct: 214 LTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRL--- 270
Query: 408 GADEIKAHPWFKGIEWDKLYQ 428
A + HPW + WD+L Q
Sbjct: 271 TAALVLRHPWI--VHWDQLPQ 289
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 50/334 (14%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FG+V+V + + TGH A+K L + ++ V ++ E L I+KLY
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
++++MEY+ GG++ + + L E+E+R + + ++ H+H +HRD+K
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
P+N+LLD + + K++DFGL SN + SDG
Sbjct: 144 PENVLLDAHMNAKIADFGL------SN---------------MMSDGE------------ 170
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+ G+P+Y APEV+ + Y G E D WS G I+Y +L G PF D
Sbjct: 171 ---------FLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 221
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEW 423
+ +KI + F L+P L+ +L + T +I+ H WFK
Sbjct: 222 PTLFKKICDG----IFYTPQYLNPSVISLLKHMLQVDPMKRAT--IKDIREHEWFKQDLP 275
Query: 424 DKLYQIKAAFIPE-VNDELDTQNFEKFEEADNQI 456
L+ ++ ++DE + EKFE ++ ++
Sbjct: 276 KYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEV 309
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 141/309 (45%), Gaps = 55/309 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D +E + IG G FG R+ R+K + A+K +++ E + E+VK E +
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREIINHRSLR 73
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+ +L ++MEY GG++ + +E+EARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 236 HNYIHRDIKPDNLLLDRNG--HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
HRD+K +N LLD + +K++DFG K + L S +
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK------------------ASVLHSQPK- 174
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
S VGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 175 -----------------------SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKF--PEEAKLSPEAKDLISKL-LCNVEQRLGTKGA 409
VG PF E RK ++ ++++ P+ +SPE + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 410 DEIKAHPWF 418
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 52/304 (17%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
+++ + +G+G+FG+V++ TG A+K + K + + ++ E + L +
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
I+KLY + + + +++EY G ++ ++++D ++E+EAR + + + A+E H+H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+KP+NLLLD + ++K++DFGL SN + +DG
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGL------SN---------------IMTDGN----- 167
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
++ G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 168 ----------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHL-KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAH 415
PF + + I N L KF LSP A LI ++L + L EI
Sbjct: 212 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 264
Query: 416 PWFK 419
WFK
Sbjct: 265 DWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 52/304 (17%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
+++ + +G+G+FG+V++ TG A+K + K + + ++ E + L +
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
I+KLY + + + +++EY G ++ ++++D ++E+EAR + + + A+E H+H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+KP+NLLLD + ++K++DFGL SN + +DG
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGL------SN---------------IMTDGN----- 166
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
++ G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 167 ----------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 210
Query: 357 PFYSDEPMSTCRKIVNWRTHL-KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAH 415
PF + + I N L KF LSP A LI ++L + L EI
Sbjct: 211 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 263
Query: 416 PWFK 419
WFK
Sbjct: 264 DWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 52/304 (17%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
+++ + +G+G+FG+V++ TG A+K + K + + ++ E + L +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
I+KLY + + + +++EY G ++ ++++D ++E+EAR + + + A+E H+H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+KP+NLLLD + ++K++DFGL SN + +DG
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGL------SN---------------IMTDGN----- 157
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
++ G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 158 ----------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 201
Query: 357 PFYSDEPMSTCRKIVNWRTHL-KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAH 415
PF + + I N L KF LSP A LI ++L + L EI
Sbjct: 202 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 254
Query: 416 PWFK 419
WFK
Sbjct: 255 DWFK 258
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 52/297 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+GA G V + ATG A++++ + ++ E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
DN+LL +G +KL+DFG C + P ++++ ++
Sbjct: 144 SDNILLGMDGSVKLTDFGFCA---------------------------QITPEQSKRSEM 176
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ ++ P+
Sbjct: 177 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 365 STCRKI-VNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
I N L+ PE KLS +D +++ L +VE+R A E+ H + K
Sbjct: 223 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR---GSAKELLQHQFLK 274
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 55/309 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D +E + IG G FG R+ R+K + + A+K +++ E + E+VK E +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLR 73
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+ +L ++MEY GG++ + +E+EARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 236 HNYIHRDIKPDNLLLDRNG--HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
HRD+K +N LLD + +K+ FG K S L S +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK------------------SSVLHSQPK- 174
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
STVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 175 -----------------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKF--PEEAKLSPEAKDLISKL-LCNVEQRLGTKGA 409
VG PF E RK ++ ++++ P+ +SPE + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 410 DEIKAHPWF 418
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 52/304 (17%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
+++ + +G+G+FG+V++ TG A+K + K + + ++ E + L +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
I+KLY + + + +++EY G ++ ++++D ++E+EAR + + + A+E H+H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+KP+NLLLD + ++K++DFGL SN + +DG
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGL------SN---------------IMTDGN----- 161
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
++ G+P+Y APEV+ K Y G E D WS G I+Y ML
Sbjct: 162 ----------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 205
Query: 357 PFYSDEPMSTCRKIVNWRTHL-KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAH 415
PF + + I N L KF LSP A LI ++L + L EI
Sbjct: 206 PFDDESIPVLFKNISNGVYTLPKF-----LSPGAAGLIKRML--IVNPLNRISIHEIMQD 258
Query: 416 PWFK 419
WFK
Sbjct: 259 DWFK 262
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 146/308 (47%), Gaps = 52/308 (16%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D ++ L +G GAFG V C EKATG V+ K + L + VK E +++ ++
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHH 107
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD-TLTEEEARFYVGETVLAIESIHK 235
++ L+ +F+D + LI+E+L GG++ + +D ++E E Y+ + ++ +H+
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
H+ +H DIKP+N+ +C+ S+++ DF + + L
Sbjct: 168 HSIVHLDIKPENI--------------MCETKKASSVKIIDFGLATKL------------ 201
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
N + T T ++ APE++ ++ G D W++G + Y +L G
Sbjct: 202 --------------NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEA--KLSPEAKDLISKLLCN-VEQRLGTKGADEI 412
PF ++ + T + + R +F E+A +SPEAKD I LL +RL A E
Sbjct: 248 SPFAGEDDLETLQNVK--RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE- 304
Query: 413 KAHPWFKG 420
HPW KG
Sbjct: 305 --HPWLKG 310
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 52/297 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+GA G V + ATG A++++ + ++ E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
DN+LL +G +KL+DFG C + P ++++ +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCA---------------------------QITPEQSKRSXM 176
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ ++ P+
Sbjct: 177 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 365 STCRKI-VNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
I N L+ PE KLS +D +++ L +VE+R A E+ H + K
Sbjct: 223 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR---GSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 52/297 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+GA G V + ATG A++++ + ++ E + E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 86 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
DN+LL +G +KL+DFG C + P ++++ +
Sbjct: 145 SDNILLGMDGSVKLTDFGFCA---------------------------QITPEQSKRSXM 177
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ ++ P+
Sbjct: 178 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 223
Query: 365 STCRKI-VNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
I N L+ PE KLS +D +++ L +VE+R A E+ H + K
Sbjct: 224 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR---GSAKELIQHQFLK 275
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 144/297 (48%), Gaps = 52/297 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+GA G V + ATG A++++ + ++ E + E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
DN+LL +G +KL+DFG C + P ++++ +
Sbjct: 144 SDNILLGMDGSVKLTDFGFCA---------------------------QITPEQSKRSTM 176
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ ++ P+
Sbjct: 177 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222
Query: 365 STCRKI-VNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
I N L+ PE KLS +D +++ L +VE+R A E+ H + K
Sbjct: 223 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR---GSAKELLQHQFLK 274
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A+K + K + E +V+ E +L +++ CI
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 174
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 175 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 215 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 271
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 272 ALRHPWLQDEDMKRKFQ 288
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A+K + K + E +V+ E +L +++ CI
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 77 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 135
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 136 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 173
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 174 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 214 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 270
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 271 ALRHPWLQDEDMKRKFQ 287
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 134/308 (43%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D ++ + IG G FG R+ R+K T + A+K +++ + + R+L
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL----R 74
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+ +L +IMEY GG++ + +E+EARF+ + + + H
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 236 HNYIHRDIKPDNLLLDRNG--HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
HRD+K +N LLD + +K+ DFG K S L S +
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSK------------------SSVLHSQPK- 175
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
STVGTP YIAPEVLL++ Y G D WS G +Y ML
Sbjct: 176 -----------------------STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML 212
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKF--PEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
VG PF E RK + +K+ P++ ++SPE LIS++ V
Sbjct: 213 VGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIF--VADPATRISIP 270
Query: 411 EIKAHPWF 418
EIK H WF
Sbjct: 271 EIKTHSWF 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A+K + K + E +V+ E +L +++ CI
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 174
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 175 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 215 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 271
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 272 ALRHPWLQDEDMKRKFQ 288
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A+K + K + E +V+ E +L +++ CI
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 136
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 137 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 174
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 175 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 215 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 271
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 272 ALRHPWLQDEDMKRKFQ 288
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A+K + K + E +V+ E +L +++ CI
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 84 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 142
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 143 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 180
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 181 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 221 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 277
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 278 ALRHPWLQDEDMKRKFQ 294
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 138/303 (45%), Gaps = 64/303 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + EK TG A+KK+ + RR E + E ++ + + +V +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 110 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + P+R
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKE------------------------VPKRK----- 199
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 200 ------------XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL 247
Query: 365 STCRKIVNWRTHLKFPEEAKLSPEAKDL--ISKLLCN------VEQRLGTKGADEIKAHP 416
R+I + L P KDL +S +L V + A E+ HP
Sbjct: 248 QAMRRIRD-----------SLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHP 296
Query: 417 WFK 419
+ K
Sbjct: 297 FLK 299
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 140/309 (45%), Gaps = 55/309 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+D +E + IG G FG R+ R+K + + A+K +++ E + E+VK E +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLR 73
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
IV+ +L ++MEY GG++ + +E+EARF+ + + + H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 236 HNYIHRDIKPDNLLLDRNG--HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
HRD+K +N LLD + +K+ FG K S L S +
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK------------------SSVLHSQPK- 174
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
TVGTP YIAPEVLLKK Y G D WS G +Y ML
Sbjct: 175 -----------------------DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKF--PEEAKLSPEAKDLISKL-LCNVEQRLGTKGA 409
VG PF E RK ++ ++++ P+ +SPE + LIS++ + + +R+
Sbjct: 212 VGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIP-- 269
Query: 410 DEIKAHPWF 418
EI+ H WF
Sbjct: 270 -EIRNHEWF 277
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 50/295 (16%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 215
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 216 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + PRR
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------VPRRK----- 305
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 306 ------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 353
Query: 365 STCRKIV-NWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+ I N LK K+SP K + +LL + T A E+ HP+
Sbjct: 354 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 404
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 52/297 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+GA G V + ATG A++++ + ++ E + E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++MEYL GG + T ++ + + E + E + A+E +H + IHR+IK
Sbjct: 86 SYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
DN+LL +G +KL+DFG C + P ++++ +
Sbjct: 145 SDNILLGMDGSVKLTDFGFCA---------------------------QITPEQSKRSTM 177
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APEV+ +K YG + D WSLG + EM+ G PP+ ++ P+
Sbjct: 178 --------------VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 223
Query: 365 STCRKI-VNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
I N L+ PE KLS +D +++ L +VE+R A E+ H + K
Sbjct: 224 RALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR---GSAKELIQHQFLK 275
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN-CIVKL 182
++G+GA+ +V+ G YA+K ++K R +V E L + N I++L
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR---EVETLYQCQGNKNILEL 76
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
F+DD YL+ E L GG ++ + ++ E EA V + A++ +H HRD
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV-APRRTQQ 301
+KP+N+L + K+S +C DF +GS + L + P+ P T
Sbjct: 137 LKPENILCESP--EKVSPVKIC-----------DFDLGSGMK--LNNSCTPITTPELT-- 179
Query: 302 EQLQHWQRNRRMLAYSTVGTPDYIAPEVL-----LKKGYGMECDWWSLGAIMYEMLVGYP 356
+ G+ +Y+APEV+ Y CD WSLG ++Y ML GYP
Sbjct: 180 ---------------TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
Query: 357 PFYSD-------EPMSTCRKIVN------WRTHLKFPEE--AKLSPEAKDLISKLLC-NV 400
PF + CR N +FP++ A +S EAKDLISKLL +
Sbjct: 225 PFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDA 284
Query: 401 EQRLGTKGADEIKAHPWFKG 420
+QRL A ++ HPW +G
Sbjct: 285 KQRL---SAAQVLQHPWVQG 301
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 50/295 (16%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 138
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 139 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + PRR
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------VPRRK----- 228
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 229 ------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 276
Query: 365 STCRKIV-NWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+ I N LK K+SP K + +LL + T A E+ HP+
Sbjct: 277 KAMKMIRDNLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 52/296 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 93
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 94 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + PRR
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------VPRRK----- 183
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 184 ------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 231
Query: 365 STCRKIVNWRTHL--KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+ I R +L + K+SP K + +LL + T A E+ HP+
Sbjct: 232 KAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 282
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A++ + K + E +V+ E +L +++ CI
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 217 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 275
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 276 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 313
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 314 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 354 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 410
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 411 ALRHPWLQDEDMKRKFQ 427
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 52/296 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 95
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 96 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + PRR
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------VPRRK----- 185
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 186 ------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 233
Query: 365 STCRKIVNWRTHL--KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+ I R +L + K+SP K + +LL + T A E+ HP+
Sbjct: 234 KAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 284
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 59/317 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-----HVKAERNLLAEVDSNCI 179
+G GA GEV++ E+ T A++ + K + E +V+ E +L +++ CI
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
+K+ F ++Y Y+++E + GG++ ++ L E + Y + +LA++ +H++ I
Sbjct: 203 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGII 261
Query: 240 HRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
HRD+KP+N+LL + + +K++DFG K L ++L
Sbjct: 262 HRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------------- 299
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK---KGYGMECDWWSLGAIMYEMLV 353
+ GTP Y+APEVL+ GY D WSLG I++ L
Sbjct: 300 --------------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEE-AKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
GYPPF + + + + PE A++S +A DL+ KLL + + R T +E
Sbjct: 340 GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT---EE 396
Query: 412 IKAHPWFKGIEWDKLYQ 428
HPW + + + +Q
Sbjct: 397 ALRHPWLQDEDMKRKFQ 413
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 52/296 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 84
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 85 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + PRR
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------VPRRK----- 174
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 175 ------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 222
Query: 365 STCRKIVNWRTHL--KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+ I R +L + K+SP K + +LL + T A E+ HP+
Sbjct: 223 KAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 52/296 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G+ G V + +++G + A+KK+ + RR E + E ++ + +V++Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQHENVVEMYN 88
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
S+ + L+++ME+L GG +T ++ + EE+ + A+ +H IHRDIK
Sbjct: 89 SYLVGDELWVVMEFLEGG-ALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
D++LL +G +KLSDFG C + PRR
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKE------------------------VPRRK----- 178
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPM 364
VGTP ++APE++ + YG E D WSLG ++ EM+ G PP++++ P+
Sbjct: 179 ------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 226
Query: 365 STCRKIVNWRTHL--KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWF 418
+ I R +L + K+SP K + +LL + T A E+ HP+
Sbjct: 227 KAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 277
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 64/340 (18%)
Query: 114 MGAD------DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAE 167
MG+D ++ L IGKG F +V++ R TG A+K + K++ L ++ + E
Sbjct: 3 MGSDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFRE 61
Query: 168 RNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETV 227
++ ++ IVKL+ + ++ LYLIMEY GG++ L+ + E+EAR + V
Sbjct: 62 VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 121
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
A++ H+ +HRD+K +NLLLD + ++K++DFG +F++G L
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS----------NEFTVGGKLD--- 168
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGA 346
+ G+P Y APE+ K Y G E D WSLG
Sbjct: 169 -----------------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
I+Y ++ G PF +++ + + F +S + ++L+ + L + GT
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT 255
Query: 407 KGADEIKAHPWFK-GIEWDKLYQIKAAFIPEVNDELDTQN 445
++I W G E D+L P V ELD +
Sbjct: 256 --LEQIMKDRWINAGHEEDELK-------PFVEPELDISD 286
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 53/298 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FG+V++ + TGH A+K L + ++ V +K E L I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+++MEY+ GG++ + + + E EAR + + A++ H+H +HRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
P+N+LLD + + K++DFGL SN + SDG
Sbjct: 139 PENVLLDAHMNAKIADFGL------SN---------------MMSDGE------------ 165
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDEP 363
++ G+P+Y APEV+ + Y G E D WS G I+Y +L G PF DE
Sbjct: 166 ---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-DDEH 215
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD--EIKAHPWFK 419
+ T K + PE S ++ LL ++ Q K A +I+ H WFK
Sbjct: 216 VPTLFKKIRGGV-FYIPEYLNRS------VATLLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 159/355 (44%), Gaps = 50/355 (14%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHP 416
PF +++ + + F +S + ++L+ K L + GT ++I
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDR 265
Query: 417 WFKGIEWDKLYQIKAAFIPEVNDELDTQNFEKFEEADNQIQTSAKSGPWRKMLSS 471
W D + A +P+ D T+ +IQ S + +++++
Sbjct: 266 WMNVGHEDDELKPYVAPLPDYKDPRRTELMVSMGYTREEIQDSLVGQRYNEVMAT 320
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 136/298 (45%), Gaps = 53/298 (17%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FG+V++ + TGH A+K L + ++ V +K E L I+KLY
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+++MEY+ GG++ + + + E EAR + + A++ H+H +HRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
P+N+LLD + + K++DFGL SN + SDG
Sbjct: 139 PENVLLDAHMNAKIADFGL------SN---------------MMSDGE------------ 165
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+ G+P+Y APEV+ + Y G E D WS G I+Y +L G PF DE
Sbjct: 166 ---------FLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF-DDEH 215
Query: 364 MSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD--EIKAHPWFK 419
+ T K + PE S ++ LL ++ Q K A +I+ H WFK
Sbjct: 216 VPTLFKKIRGGV-FYIPEYLNRS------VATLLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 52/303 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F+ L +G+G++G V K TG + A+K++ L + + E +++ + DS
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-----QEIIKEISIMQQCDSPH 85
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+VK Y S+ + L+++MEY G + ++ +R TLTE+E + T+ +E +H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
IHRDIK N+LL+ GH KL+DFG + L+ +
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFG----------------VAGQLTDXMA--------- 180
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
+RN +GTP ++APEV+ + GY D WSLG EM G PP
Sbjct: 181 ----------KRN------XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
Query: 358 FYSDEPMSTCRKI-VNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHP 416
+ PM I N + PE S D + + L ++ T A ++ HP
Sbjct: 225 YADIHPMRAIFMIPTNPPPTFRKPE--LWSDNFTDFVKQCLVKSPEQRAT--ATQLLQHP 280
Query: 417 WFK 419
+ +
Sbjct: 281 FVR 283
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 58/330 (17%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHP 74
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYLIMEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG SN +F++G L
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGF------SN----EFTVGGKLD------------- 171
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 172 -------------------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHP 416
PF +++ + + F +S + ++L+ + L + GT ++I
Sbjct: 213 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT--LEQIMKDR 266
Query: 417 WFK-GIEWDKLYQIKAAFIPEVNDELDTQN 445
W G E D+L P V ELD +
Sbjct: 267 WINAGHEEDELK-------PFVEPELDISD 289
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 129/286 (45%), Gaps = 62/286 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKL-KKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G+G+F R C K + +A+K + K+ E + ++ +K L E N IVKL+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALK-----LCEGHPN-IVKLH 72
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
F D + +L+ME L GG++ + +K +E EA + + + V A+ +H +HRD+
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 244 KPDNLLL---DRNGHMKLSDFGLC--KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
KP+NLL + N +K+ DFG KP D L+ F++
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTL------------------- 173
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
Y APE+L + GY CD WSLG I+Y ML G PF
Sbjct: 174 ------------------------HYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
Query: 359 YSDEPMSTCRKIVNWRTHLK-----FPEEA--KLSPEAKDLISKLL 397
S + TC V +K F EA +S EAKDLI LL
Sbjct: 210 QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLL 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 48/290 (16%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
PF +++ + + F +S + ++L+ K L + GT
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 61/306 (19%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
++G G G+V C + TG A+K L S R+ H +A CI+ +Y
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS----GGPHIVCILDVY 91
Query: 184 CSFQDDE-YLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNYIH 240
+ + L +IME + GG++ + + + TE EA + + AI+ +H HN H
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 151
Query: 241 RDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
RD+KP+NLL +++ +KL+DFG K
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAK-------------------------------- 179
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
T Q LQ + TP Y+APEVL + Y CD WSLG IMY +L G+PP
Sbjct: 180 ETTQNALQ-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
Query: 358 FYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEI 412
FYS+ + R+I + PE +++S +AK LI LL + +RL +
Sbjct: 229 FYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTIT---QF 285
Query: 413 KAHPWF 418
HPW
Sbjct: 286 MNHPWI 291
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 48/290 (16%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
PF +++ + + F +S + ++L+ K L + GT
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 136/306 (44%), Gaps = 61/306 (19%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
++G G G+V C + TG A+K L S R+ H +A CI+ +Y
Sbjct: 17 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS----GGPHIVCILDVY 72
Query: 184 CSFQDDE-YLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNYIH 240
+ + L +IME + GG++ + + + TE EA + + AI+ +H HN H
Sbjct: 73 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 132
Query: 241 RDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
RD+KP+NLL +++ +KL+DFG K
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAK-------------------------------- 160
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
T Q LQ + TP Y+APEVL + Y CD WSLG IMY +L G+PP
Sbjct: 161 ETTQNALQ-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
Query: 358 FYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEI 412
FYS+ + R+I + PE +++S +AK LI LL + +RL +
Sbjct: 210 FYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTIT---QF 266
Query: 413 KAHPWF 418
HPW
Sbjct: 267 MNHPWI 272
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 48/290 (16%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A++ + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
PF +++ + + F +S + ++L+ K L + GT
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 136/290 (46%), Gaps = 48/290 (16%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 66
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 163
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 164 -------------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
PF +++ + + F +S + ++L+ K L + GT
Sbjct: 205 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 250
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 135/290 (46%), Gaps = 48/290 (16%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A++ + K++ L ++ + E ++ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLNHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
G+P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------EFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
PF +++ + + F +S + ++L+ K L + GT
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 44/235 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IGKG F +V++ R TG A+K + K++ L ++ + E ++ ++ IVKL+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ ++ LYL+MEY GG++ L+ + E+EAR + V A++ H+ +HRD+K
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLK 141
Query: 245 PDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
+NLLLD + ++K++DFG +F++G+ L
Sbjct: 142 AENLLLDGDMNIKIADFGFS----------NEFTVGNKLD-------------------- 171
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYPPF 358
+ G+P Y APE+ K Y G E D WSLG I+Y ++ G PF
Sbjct: 172 ------------TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 155/340 (45%), Gaps = 61/340 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRG--QVEHVKAERNLLAEV 174
D +E +IGKGAF VR C + TG +A+K + ++ E +K E ++ +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDM-MTLLMRKD---TLTEEEARFYVGETVLAI 230
IV+L ++ D LY++ E++ G D+ ++ R D +E A Y+ + + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 231 ESIHKHNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
H +N IHRD+KP+N+LL + + +KL DFG+ L S L
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL--------------- 188
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+A VGTP ++APEV+ ++ YG D W G I
Sbjct: 189 --------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISK-LLCNVEQRLGT 406
++ +L G PFY + I+ + + + + +S AKDL+ + L+ + +R+
Sbjct: 223 LFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV 281
Query: 407 KGADEIKAHPWFKGIEWDKL-YQIKAAFIPEVNDELDTQN 445
E HPW K E D+ Y+I +PE ++L N
Sbjct: 282 Y---EALNHPWLK--ERDRYAYKIH---LPETVEQLRKFN 313
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 53/254 (20%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A+D+E L IG G++G + R K+ G + K+L M + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 176 SNCIVKLYCSFQD--DEYLYLIMEYLPGGDMMTLLMR----KDTLTEEEARFYVGETVLA 229
IV+ Y D + LY++MEY GGD+ +++ + + L EE + + LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 230 IESIHK-----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
++ H+ H +HRD+KP N+ LD ++KL DFGL + L+ ++DF
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDEDF------- 172
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
A VGTP Y++PE + + Y + D WSL
Sbjct: 173 ------------------------------AKEFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 345 GAIMYEMLVGYPPF 358
G ++YE+ PPF
Sbjct: 203 GCLLYELCALMPPF 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 152/339 (44%), Gaps = 53/339 (15%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
+H D ++ +G GAFG V E+ATG+ +A K + E V+ E
Sbjct: 45 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQT 101
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLA 229
++ + +V L+ +F+DD + +I E++ GG++ + + ++E+EA Y+ +
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 230 IESIHKHNYIHRDIKPDNLLLD--RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
+ +H++NY+H D+KP+N++ R+ +KL DFGL LD
Sbjct: 162 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------- 202
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
P+++ + T GT ++ APEV K G D WS+G +
Sbjct: 203 --------PKQSVK---------------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISK-LLCNVEQRLGT 406
Y +L G PF + T R + + ++ + +S + KD I K LL + R+
Sbjct: 240 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 299
Query: 407 KGADEIKAHPWFK-GIEWDKLYQIKAAFIPEVNDELDTQ 444
A E HPW G + QI ++ ++ D + T+
Sbjct: 300 HQALE---HPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 335
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 53/339 (15%)
Query: 111 RHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
+H D ++ +G GAFG V E+ATG+ +A K + E V+ E
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQT 207
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-DTLTEEEARFYVGETVLA 229
++ + +V L+ +F+DD + +I E++ GG++ + + + ++E+EA Y+ +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 230 IESIHKHNYIHRDIKPDNLLLD--RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
+ +H++NY+H D+KP+N++ R+ +KL DFGL LD
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------- 308
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
P+++ + T GT ++ APEV K G D WS+G +
Sbjct: 309 --------PKQSVK---------------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISK-LLCNVEQRLGT 406
Y +L G PF + T R + + ++ + +S + KD I K LL + R+
Sbjct: 346 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 405
Query: 407 KGADEIKAHPWFK-GIEWDKLYQIKAAFIPEVNDELDTQ 444
A E HPW G + QI ++ ++ D + T+
Sbjct: 406 HQALE---HPWLTPGNAPGRDSQIPSSRYTKIRDSIKTK 441
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 53/254 (20%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A+D+E L IG G++G + R K+ G + K+L M + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 176 SNCIVKLYCSFQD--DEYLYLIMEYLPGGDMMTLLMR----KDTLTEEEARFYVGETVLA 229
IV+ Y D + LY++MEY GGD+ +++ + + L EE + + LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 230 IESIHK-----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
++ H+ H +HRD+KP N+ LD ++KL DFGL + L+ K F
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF------- 176
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
VGTP Y++PE + + Y + D WSL
Sbjct: 177 ----------------------------------VGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 345 GAIMYEMLVGYPPF 358
G ++YE+ PPF
Sbjct: 203 GCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 53/254 (20%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A+D+E L IG G++G + R K+ G + K+L M + + + +E NLL E+
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELK 63
Query: 176 SNCIVKLYCSFQD--DEYLYLIMEYLPGGDMMTLLMR----KDTLTEEEARFYVGETVLA 229
IV+ Y D + LY++MEY GGD+ +++ + + L EE + + LA
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 230 IESIHK-----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
++ H+ H +HRD+KP N+ LD ++KL DFGL + L+ K F
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF------- 176
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
VGTP Y++PE + + Y + D WSL
Sbjct: 177 ----------------------------------VGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 345 GAIMYEMLVGYPPF 358
G ++YE+ PPF
Sbjct: 203 GCLLYELCALMPPF 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 48/290 (16%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ L IGKG F +V++ R TG A+K + K++ L ++ + E + ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIXKVLNHP 73
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
IVKL+ + ++ LYL+ EY GG++ L+ E+EAR + V A++ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+K +NLLLD + ++K++DFG +F+ G+ L
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFS----------NEFTFGNKLD------------- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEMLVGYP 356
+ G P Y APE+ K Y G E D WSLG I+Y ++ G
Sbjct: 171 -------------------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGT 406
PF +++ + + F S + ++L+ K L + GT
Sbjct: 212 PFDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKKFLILNPSKRGT 257
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 151/355 (42%), Gaps = 94/355 (26%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEM--LRRGQVEHVKAERNLLAEVDSNCIVKL 182
IG+G++G VRV E T + A+K + K+++ + VE +K E L+ ++ I +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 183 YCSFQDDEYLYLIMEYLPGG---DMMTLLMRKDTL----------------TEEEA---- 219
Y ++D++Y+ L+ME GG D + + + T EEA
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 220 --------RFYVGETVL---------AIESIHKHNYIHRDIKPDNLLLDRNG--HMKLSD 260
F E ++ A+ +H HRDIKP+N L N +KL D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 261 FGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST-V 319
FGL K + N +T
Sbjct: 214 FGLSKEF--------------------------------------YKLNNGEYYGMTTKA 235
Query: 320 GTPDYIAPEVL--LKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHL 377
GTP ++APEVL + YG +CD WS G +++ +L+G PF T +++N +
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 378 KFPEEAKLSPEAKDLISKLLC-NVEQRLGTKGADEIKA--HPWFKGIEWDKLYQI 429
+ P LSP A+DL+S LL NV++R D ++A HPW DK+Y++
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERF-----DAMRALQHPWISQFS-DKIYKM 344
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 141/308 (45%), Gaps = 67/308 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV--EHVKAERNLLAEVDSNCIVKL 182
+G GAFG+V + E+++G +K + K R QV E ++AE +L +D I+K+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKD----RSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL----AIESIHKHNY 238
+ F+D +Y++ME GG+++ ++ + + YV E + A+ H +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 239 IHRDIKPDNLLL-DRNGH--MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
+H+D+KP+N+L D + H +K+ DFGL + +SD
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAE--------------------LFKSD----- 180
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
+H + + GT Y+APEV K+ +CD WS G +MY +L G
Sbjct: 181 ---------EH--------STNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGC 222
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEA----KLSPEAKDLISKLLCNVEQRLGTKGADE 411
PF T + V + K P A L+P+A DL+ ++L +R A +
Sbjct: 223 LPF-----TGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPER--RPSAAQ 275
Query: 412 IKAHPWFK 419
+ H WFK
Sbjct: 276 VLHHEWFK 283
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 81
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ K Y S+ D L++IMEYL GG + LL L E + + E + ++ +H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LL +G +KL+DFG+ L + ++ F
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--------------------- 179
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 180 --------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 219
Query: 359 YSDEPM 364
PM
Sbjct: 220 SELHPM 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 66
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ K Y S+ D L++IMEYL GG + LL L E + + E + ++ +H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LL +G +KL+DFG+ L + ++ F
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--------------------- 164
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 165 --------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 204
Query: 359 YSDEPM 364
PM
Sbjct: 205 SELHPM 210
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 67/323 (20%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC----- 178
++G+GA V+ C T YA+K ++K Q H+++ E+ C
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQGHRN 72
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+++L F++++ YL+ E + GG +++ + ++ E EA V + A++ +H
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
HRD+KP+N+L + P S ++ DF +GS + L D P++
Sbjct: 133 AHRDLKPENILCEH-------------PNQVSPVKICDFGLGSGIK--LNGDCSPISTPE 177
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-----YGMECDWWSLGAIMYEMLV 353
+ G+ +Y+APEV+ Y CD WSLG I+Y +L
Sbjct: 178 L----------------LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 354 GYPPFYS----------DEPMSTCRKIVNWRTH---LKFPEE--AKLSPEAKDLISKLLC 398
GYPPF E C+ ++ +FP++ A +S AKDLISKLL
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 399 -NVEQRLGTKGADEIKAHPWFKG 420
+ +QRL A ++ HPW +G
Sbjct: 282 RDAKQRL---SAAQVLQHPWVQG 301
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 66
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ K Y S+ D L++IMEYL GG + LL L E + + E + ++ +H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LL +G +KL+DFG+ L + ++ F
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--------------------- 164
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 165 --------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 204
Query: 359 YSDEPM 364
PM
Sbjct: 205 SELHPM 210
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 67/323 (20%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC----- 178
++G+GA V+ C T YA+K ++K Q H+++ E+ C
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQGHRN 72
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+++L F++++ YL+ E + GG +++ + ++ E EA V + A++ +H
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
HRD+KP+N+L + P S ++ DF +GS + L D P++
Sbjct: 133 AHRDLKPENILCEH-------------PNQVSPVKICDFDLGSGIK--LNGDCSPISTPE 177
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-----YGMECDWWSLGAIMYEMLV 353
+ G+ +Y+APEV+ Y CD WSLG I+Y +L
Sbjct: 178 L----------------LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS 221
Query: 354 GYPPFYS----------DEPMSTCRKIVNWRTH---LKFPEE--AKLSPEAKDLISKLLC 398
GYPPF E C+ ++ +FP++ A +S AKDLISKLL
Sbjct: 222 GYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLV 281
Query: 399 -NVEQRLGTKGADEIKAHPWFKG 420
+ +QRL A ++ HPW +G
Sbjct: 282 RDAKQRL---SAAQVLQHPWVQG 301
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 110/246 (44%), Gaps = 44/246 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS+
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSSY 82
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ K Y S+ L++IMEYL GG + LL R E + + E + ++ +H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LL G +KL+DFG+ L + ++ F
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF--------------------- 180
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 181 --------------------VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN 220
Query: 359 YSDEPM 364
PM
Sbjct: 221 SDMHPM 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 44/246 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPY 86
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ K Y S+ D L++IMEYL GG + LL L E + + E + ++ +H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LL +G +KL+DFG+ L + ++ F
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--------------------- 184
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 185 --------------------VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPH 224
Query: 359 YSDEPM 364
PM
Sbjct: 225 SELHPM 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 53/282 (18%)
Query: 123 TMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKL 182
++GKG +G V R+ + A+K++ + + R Q H E L + IV+
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH--EEIALHKHLKHKNIVQY 84
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRK-DTL--TEEEARFYVGETVLAIESIHKHNYI 239
SF ++ ++ + ME +PGG + LL K L E+ FY + + ++ +H + +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 240 HRDIKPDNLLLDR-NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
HRDIK DN+L++ +G +K+SDFG K L N + F+
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-------------------- 184
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYEMLVGYP 356
GT Y+APE++ K +GYG D WSLG + EM G P
Sbjct: 185 ---------------------GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
Query: 357 PFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
PFY EP + K+ ++ H + PE +S EAK I K
Sbjct: 224 PFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFILKCF 263
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 111
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 218
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 219 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 250 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 309
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 310 PTQRMTI---TEFMNHPWI 325
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 117
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 224
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 225 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 256 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 315
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 316 PTQRMTI---TEFMNHPWI 331
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 67
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 174
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 175 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 206 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 265
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 266 PTQRMTI---TEFMNHPWI 281
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 135/320 (42%), Gaps = 73/320 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 65
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSN-LQEKDFSIGSNL 283
AI+ +H N HRD+KP+NLL N +KL+DFG K N L E +
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY------ 179
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
TP Y+APEVL + Y CD WS
Sbjct: 180 -------------------------------------TPYYVAPEVLGPEKYDKSCDMWS 202
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-C 398
LG IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 203 LGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT 262
Query: 399 NVEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 263 EPTQRMTIT---EFMNHPWI 279
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 53/282 (18%)
Query: 123 TMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKL 182
++GKG +G V R+ + A+K++ + + R Q H E L + IV+
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH--EEIALHKHLKHKNIVQY 70
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRK-DTL--TEEEARFYVGETVLAIESIHKHNYI 239
SF ++ ++ + ME +PGG + LL K L E+ FY + + ++ +H + +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 240 HRDIKPDNLLLDR-NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
HRDIK DN+L++ +G +K+SDFG K L N + F+
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-------------------- 170
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYEMLVGYP 356
GT Y+APE++ K +GYG D WSLG + EM G P
Sbjct: 171 ---------------------GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
Query: 357 PFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
PFY EP + K+ ++ H + PE +S EAK I K
Sbjct: 210 PFYELGEPQAAMFKVGMFKVHPEIPE--SMSAEAKAFILKCF 249
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 72
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 179
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 180 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 211 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 270
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 271 PTQRMTI---TEFMNHPWI 286
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 73
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 180
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 181 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 212 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 271
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 272 PTQRMTI---TEFMNHPWI 287
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 71
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 178
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 179 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 210 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 269
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 270 PTQRMTI---TEFMNHPWI 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 67
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 174
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 175 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 206 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 265
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 266 PTQRMTIT---EFMNHPWI 281
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 81
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 188
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 189 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 220 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 279
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 280 PTQRMTI---TEFMNHPWI 295
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 61/340 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRG--QVEHVKAERNLLAEV 174
D +E +IGKG F VR C + TG +A+K + ++ E +K E ++ +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDM-MTLLMRKD---TLTEEEARFYVGETVLAI 230
IV+L ++ D LY++ E++ G D+ ++ R D +E A Y+ + + A+
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 231 ESIHKHNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
H +N IHRD+KP +LL + + +KL FG+ L S L
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--------------- 190
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+A VGTP ++APEV+ ++ YG D W G I
Sbjct: 191 --------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 224
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISK-LLCNVEQRLGT 406
++ +L G PFY + I+ + + + + +S AKDL+ + L+ + +R+
Sbjct: 225 LFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV 283
Query: 407 KGADEIKAHPWFKGIEWDKL-YQIKAAFIPEVNDELDTQN 445
E HPW K E D+ Y+I +PE ++L N
Sbjct: 284 Y---EALNHPWLK--ERDRYAYKIH---LPETVEQLRKFN 315
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 47/252 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G F EV G A+KK++ +++ E +LL +++ ++K Y
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLM----RKDTLTEEEARFYVGETVLAIESIHKHNYIH 240
SF +D L +++E GD+ ++ +K + E Y + A+E +H +H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
RDIKP N+ + G +KL D GL GR + + T
Sbjct: 160 RDIKPANVFITATGVVKLGDLGL---------------------------GRFFSSKTTA 192
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 360
A+S VGTP Y++PE + + GY + D WSLG ++YEM PFY
Sbjct: 193 --------------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
Query: 361 DEP--MSTCRKI 370
D+ S C+KI
Sbjct: 239 DKMNLYSLCKKI 250
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 66
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 173
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 174 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 205 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 264
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 265 PTQRMTI---TEFMNHPWI 280
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 134/319 (42%), Gaps = 71/319 (22%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 65
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 172
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 173 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CN 399
G IMY +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 204 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 263
Query: 400 VEQRLGTKGADEIKAHPWF 418
QR+ E HPW
Sbjct: 264 PTQRMTI---TEFMNHPWI 279
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 61/340 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRG--QVEHVKAERNLLAEV 174
D +E +IGKG F VR C + TG +A+K + ++ E +K E ++ +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDM-MTLLMRKD---TLTEEEARFYVGETVLAI 230
IV+L ++ D LY++ E++ G D+ ++ R D +E A Y+ + + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 231 ESIHKHNYIHRDIKPDNLLL---DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
H +N IHRD+KP +LL + + +KL FG+ L S L
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL--------------- 188
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+A VGTP ++APEV+ ++ YG D W G I
Sbjct: 189 --------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVI 222
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISK-LLCNVEQRLGT 406
++ +L G PFY + I+ + + + + +S AKDL+ + L+ + +R+
Sbjct: 223 LFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITV 281
Query: 407 KGADEIKAHPWFKGIEWDKL-YQIKAAFIPEVNDELDTQN 445
E HPW K E D+ Y+I +PE ++L N
Sbjct: 282 Y---EALNHPWLK--ERDRYAYKIH---LPETVEQLRKFN 313
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 61/315 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL-LAEVDSNC--IVK 181
+G+G F VR C K+TG YA K LKK RRGQ + + + E+ +C ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKR---RRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNYI 239
L+ +++ + LI+EY GG++ +L + + + ++E + + + + + +H++N +
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153
Query: 240 HRDIKPDNLLLDRN---GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
H D+KP N+LL G +K+ DFG+ +
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSR------------------------------- 182
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
++ H R ++ GTP+Y+APE+L D W++G I Y +L
Sbjct: 183 ------KIGHACELREIM-----GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS 231
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEE--AKLSPEAKDLISKLLC-NVEQRLGTKGADEIK 413
PF ++ T I + ++ + EE + +S A D I LL N E+R A+
Sbjct: 232 PFVGEDNQETYLNIS--QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR---PTAEICL 286
Query: 414 AHPWFKGIEWDKLYQ 428
+H W + +++ L+
Sbjct: 287 SHSWLQQWDFENLFH 301
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 127/277 (45%), Gaps = 52/277 (18%)
Query: 101 KKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK-KSEMLRRG 159
+K EY ++R + +E + +G GAFG+V + K TG + A K ++ KSE
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----E 58
Query: 160 QVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT-LTEEE 218
++E E +LA D IVKL ++ D L++++E+ PGG + +++ D LTE +
Sbjct: 59 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 118
Query: 219 ARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFS 278
+ + + A+ +H IHRD+K N+L+ G ++L+DFG+ + LQ++D
Sbjct: 119 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRD-- 175
Query: 279 IGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KK 333
S +GTP ++APEV++
Sbjct: 176 --------------------------------------SFIGTPYWMAPEVVMCETMKDT 197
Query: 334 GYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI 370
Y + D WSLG + EM PP + PM KI
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 234
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 44/246 (17%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IGKG+FGEV + T V A+K + E ++E ++ E +L++ DS
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 78
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
I + + S+ L++IMEYL GG + LL + L E + E + ++ +H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LL G +KL+DFG+ L + ++ F
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF--------------------- 176
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
VGTP ++APEV+ + Y + D WSLG E+ G PP
Sbjct: 177 --------------------VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN 216
Query: 359 YSDEPM 364
PM
Sbjct: 217 SDLHPM 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 130/318 (40%), Gaps = 69/318 (21%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRA--------- 111
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ E L GG++ + + + TE EA
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
AI+ +H N HRD+KP+NLL N +KL+DFG K N
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------- 218
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
S P TP Y+APEVL + Y CD WSL
Sbjct: 219 ----SLTTPCY-------------------------TPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 345 GAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
G I Y +L GYPPFYS+ ++ +I + PE +++S E K LI LL
Sbjct: 250 GVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTE 309
Query: 401 EQRLGTKGADEIKAHPWF 418
+ T E HPW
Sbjct: 310 PTQRXT--ITEFXNHPWI 325
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 131/305 (42%), Gaps = 65/305 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMK--KLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKL 182
+G+G FG V C E ++ Y K K+K ++ + VK E ++L I+ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISILNIARHRNILHL 66
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT----LTEEEARFYVGETVLAIESIHKHNY 238
+ SF+ E L +I E++ G D+ R +T L E E YV + A++ +H HN
Sbjct: 67 HESFESMEELVMIFEFISGLDIFE---RINTSAFELNEREIVSYVHQVCEALQFLHSHNI 123
Query: 239 IHRDIKPDNLLLD--RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
H DI+P+N++ R+ +K+ +FG + L +
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD------------------------- 158
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
N R+L P+Y APEV D WSLG ++Y +L G
Sbjct: 159 -------------NFRLL----FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
Query: 357 PFYSDEPMSTCRKIVNWRTHLKFPEEA--KLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF ++ I+N F EEA ++S EA D + +LL V++R A E
Sbjct: 202 PFLAETNQQIIENIMN--AEYTFDEEAFKEISIEAMDFVDRLL--VKERKSRMTASEALQ 257
Query: 415 HPWFK 419
HPW K
Sbjct: 258 HPWLK 262
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 60/295 (20%)
Query: 105 EYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHV 164
+Y+RLQ+ IG+G+FG+ + + G Y +K++ S M + + E
Sbjct: 25 KYVRLQK-------------IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREES 70
Query: 165 KAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARF-Y 222
+ E +LA + IV+ SF+++ LY++M+Y GGD+ + +K L +E+ +
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW 130
Query: 223 VGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ LA++ +H +HRDIK N+ L ++G ++L DFG+ + L+ S ++
Sbjct: 131 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVE--------- 180
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
LA + +GTP Y++PE+ K Y + D W
Sbjct: 181 -------------------------------LARACIGTPYYLSPEICENKPYNNKSDIW 209
Query: 343 SLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
+LG ++YE+ F + + KI++ P S + + L+S+L
Sbjct: 210 ALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---PVSLHYSYDLRSLVSQLF 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 140/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + A +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINAML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 57/321 (17%)
Query: 105 EYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL-KKSEMLRRGQVEH 163
+Y + R D +E + +G GAFG+V + K T + A K + KSE ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELED 80
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD-TLTEEEARFY 222
E ++LA D IVKL +F + L++++E+ GG + +++ + LTE + +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 223 VGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+T+ A+ +H + IHRD+K N+L +G +KL+DFG+ + +Q +D
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRD------ 193
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGM 337
S +GTP ++APEV++ + Y
Sbjct: 194 ----------------------------------SFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 338 ECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
+ D WSLG + EM PP + PM KI + ++ S KD + K L
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP-TLAQPSRWSSNFKDFLKKCL 278
Query: 398 -CNVEQRLGTKGADEIKAHPW 417
NV+ R T ++ HP+
Sbjct: 279 EKNVDARWTTS---QLLQHPF 296
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 57/321 (17%)
Query: 105 EYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL-KKSEMLRRGQVEH 163
+Y + R D +E + +G GAFG+V + K T + A K + KSE ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELED 80
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD-TLTEEEARFY 222
E ++LA D IVKL +F + L++++E+ GG + +++ + LTE + +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 223 VGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+T+ A+ +H + IHRD+K N+L +G +KL+DFG
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG-------------------- 180
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGM 337
V+ + T+ Q RR S +GTP ++APEV++ + Y
Sbjct: 181 -----------VSAKNTRXIQ-------RR---DSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 338 ECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
+ D WSLG + EM PP + PM KI + ++ S KD + K L
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP-TLAQPSRWSSNFKDFLKKCL 278
Query: 398 -CNVEQRLGTKGADEIKAHPW 417
NV+ R T ++ HP+
Sbjct: 279 EKNVDARWTTS---QLLQHPF 296
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 52/253 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLK-KSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G GAFG+V + K TG + A K ++ KSE ++E E +LA D IVKL
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLL 74
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDT-LTEEEARFYVGETVLAIESIHKHNYIHRD 242
++ D L++++E+ PGG + +++ D LTE + + + + A+ +H IHRD
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 243 IKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQE 302
+K N+L+ G ++L+DFG+ + LQ++D
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRD-------------------------- 167
Query: 303 QLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSLGAIMYEMLVGYPP 357
S +GTP ++APEV++ Y + D WSLG + EM PP
Sbjct: 168 --------------SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
Query: 358 FYSDEPMSTCRKI 370
+ PM KI
Sbjct: 214 HHELNPMRVLLKI 226
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 74/295 (25%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A DFE + ++G+GAFG+V R YA+KK++ +E ++ + +E LLA ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLN 60
Query: 176 SNCIVKLYCSF-------------QDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFY 222
+V+ Y ++ + L++ MEY G + L+ ++ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 223 VGETVL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK----PLDCSNLQEKDF 277
+ +L A+ IH IHRD+KP N+ +D + ++K+ DFGL K LD L +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ-- 178
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YG 336
NL G+ SD S +GT Y+A EVL G Y
Sbjct: 179 ----NLPGS--SDNLT-----------------------SAIGTAMYVATEVLDGTGHYN 209
Query: 337 MECDWWSLGAIMYEML--------------------VGYPPFYSDEPMSTCRKIV 371
+ D +SLG I +EM+ + +PP + D M +KI+
Sbjct: 210 EKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKII 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 111/263 (42%), Gaps = 59/263 (22%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A FE + ++G G +G+V R TG + A+K + + + E +K E N+L +
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYS 78
Query: 176 SN-CIVKLYCSFQD------DEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGET 226
+ I Y +F D+ L+L+ME+ G + L+ + +TL EE + E
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ + +H+H IHRDIK N+LL N +KL DFG+ LD
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD------------------ 180
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECDW 341
R V R T +GTP ++APEV+ Y + D
Sbjct: 181 -----RTVGRRNT------------------FIGTPYWMAPEVIACDENPDATYDFKSDL 217
Query: 342 WSLGAIMYEMLVGYPPFYSDEPM 364
WSLG EM G PP PM
Sbjct: 218 WSLGITAIEMAEGAPPLCDMHPM 240
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 60
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 156
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 157 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 201
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 202 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 255
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 256 DIKKDRWY 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 57/321 (17%)
Query: 105 EYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL-KKSEMLRRGQVEH 163
+Y + R D +E + +G GAFG+V + K T + A K + KSE ++E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELED 80
Query: 164 VKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD-TLTEEEARFY 222
E ++LA D IVKL +F + L++++E+ GG + +++ + LTE + +
Sbjct: 81 YMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 223 VGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+T+ A+ +H + IHRD+K N+L +G +KL+DFG
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG-------------------- 180
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGM 337
V+ + T+ Q RR +GTP ++APEV++ + Y
Sbjct: 181 -----------VSAKNTRXIQ-------RR---DXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 338 ECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
+ D WSLG + EM PP + PM KI + ++ S KD + K L
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP-TLAQPSRWSSNFKDFLKKCL 278
Query: 398 -CNVEQRLGTKGADEIKAHPW 417
NV+ R T ++ HP+
Sbjct: 279 EKNVDARWTTS---QLLQHPF 296
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 158
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 159 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 204 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 257
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 258 DIKKDRWY 265
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 115/259 (44%), Gaps = 46/259 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---KSEMLRRGQVEHVKAERNLLA 172
A +E L +G+G F V R+K T + A+KK+K +SE + G E LL
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA-KDGINRTALREIKLLQ 67
Query: 173 EVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
E+ I+ L +F + L+ +++ + + LT + Y+ T+ +E
Sbjct: 68 ELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H+H +HRD+KP+NLLLD NG +KL+DFGL K S GS
Sbjct: 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAK------------SFGS----------- 164
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEM 351
P R Q V T Y APE+L + YG+ D W++G I+ E+
Sbjct: 165 ---PNRAYXHQ---------------VVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
Query: 352 LVGYPPFYSDEPMSTCRKI 370
L+ P D + +I
Sbjct: 207 LLRVPFLPGDSDLDQLTRI 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 138/308 (44%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P +C++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 36/308 (11%)
Query: 108 RLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAE 167
R+ RH + +E + +GKGA+G V ++ TG V A+KK+ + + E
Sbjct: 2 RVDRHVLRK--YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFRE 58
Query: 168 RNLLAEVDSN-CIVKLYCSFQ--DDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG 224
+L E+ + IV L + +D +YL+ +Y+ + ++R + L ++ V
Sbjct: 59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVY 116
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
+ + I+ +H +HRD+KP N+LL+ H+K++DFGL + + + N +
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWS 343
D +P+ V T Y APE+LL Y D WS
Sbjct: 177 TENFDDDQPILT--------------------DYVATRWYRAPEILLGSTKYTKGIDMWS 216
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPE----EAKLSPEAKDLISKLLCN 399
LG I+ E+L G P F M+ +I+ + FP E+ SP AK +I L
Sbjct: 217 LGCILGEILCGKPIFPGSSTMNQLERIIGV---IDFPSNEDVESIQSPFAKTMIESLKEK 273
Query: 400 VEQRLGTK 407
VE R K
Sbjct: 274 VEIRQSNK 281
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 74/295 (25%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A DFE + ++G+GAFG+V R YA+KK++ +E ++ + +E LLA ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLASLN 60
Query: 176 SNCIVKLYCSF-------------QDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFY 222
+V+ Y ++ + L++ MEY + L+ ++ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 223 VGETVL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK----PLDCSNLQEKDF 277
+ +L A+ IH IHRD+KP N+ +D + ++K+ DFGL K LD L +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ-- 178
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YG 336
NL G+ SD S +GT Y+A EVL G Y
Sbjct: 179 ----NLPGS--SDNLT-----------------------SAIGTAMYVATEVLDGTGHYN 209
Query: 337 MECDWWSLGAIMYEML--------------------VGYPPFYSDEPMSTCRKIV 371
+ D +SLG I +EM+ + +PP + D M +KI+
Sbjct: 210 EKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKII 264
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 53/308 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEV 174
+D++ + +G+GA+GEV++ + T A+K + +M R E++K E + +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH 234
+ +VK Y ++ YL +EY GG++ + + E +A+ + + + + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
HRDIKP+NLLLD ++K+SDFGL +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN------------------------ 157
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-CDWWSLGAIMYEMLV 353
NR L GT Y+APE+L ++ + E D WS G ++ ML
Sbjct: 158 ---------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GYPPFYSDEPMSTCRKIVNW---RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
G P+ D+P + ++ +W +T+L ++ +P A L+ K+L VE
Sbjct: 203 GELPW--DQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA--LLHKIL--VENPSARITIP 256
Query: 411 EIKAHPWF 418
+IK W+
Sbjct: 257 DIKKDRWY 264
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 49/257 (19%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSE---MLRRGQVEHVKAERNLLAEVD 175
+E L ++G+G++G V CR K TG + A+KK +S+ M+++ + +K LL ++
Sbjct: 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK----LLKQLR 82
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
+V L + + YL+ E++ + L + + L + + Y+ + + I H
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
HN IHRDIKP+N+L+ ++G +KL DFG + L A
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTL--------------------------AA 176
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIMYEMLVG 354
P ++ V T Y APE+L+ YG D W++G ++ EM +G
Sbjct: 177 PGEVYDDE---------------VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 355 YPPFYSDEPMSTCRKIV 371
P F D + I+
Sbjct: 222 EPLFPGDSDIDQLYHIM 238
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 47/250 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL-LAEVDSNCIVKLY 183
+G+G+FGEV +K TG A+KK++ +E +AE + A + S IV LY
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
+ ++ ++ + ME L GG + L+ + L E+ A +Y+G+ + +E +H +H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 244 KPDNLLLDRNG-HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQE 302
K DN+LL +G H L DFG L L KD G +
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLG-KDLLTGDYIP------------------ 233
Query: 303 QLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDE 362
GT ++APEV+L + + D WS +M ML G P+
Sbjct: 234 -----------------GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 276
Query: 363 PMSTCRKIVN 372
C KI +
Sbjct: 277 RGPLCLKIAS 286
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 53/253 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL-LAEVDSNCIVKLY 183
+G+G+FGEV +K TG A+KK++ +E +AE + A + S IV LY
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDI 243
+ ++ ++ + ME L GG + L+ + L E+ A +Y+G+ + +E +H +H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 244 KPDNLLLDRNG-HMKLSDFG--LCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
K DN+LL +G H L DFG +C LQ DG
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVC----------------------LQPDG--------- 240
Query: 301 QEQLQHWQRNRRMLAYSTV-GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY 359
+ +L + GT ++APEV+L + + D WS +M ML G P+
Sbjct: 241 --------LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWT 292
Query: 360 SDEPMSTCRKIVN 372
C KI +
Sbjct: 293 QFFRGPLCLKIAS 305
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 136/303 (44%), Gaps = 57/303 (18%)
Query: 124 MIGK-GAFGEVRVCREKATGHVYAMKKL-KKSEMLRRGQVEHVKAERNLLAEVDSNCIVK 181
+IG+ G FG+V + K T + A K + KSE ++E E ++LA D IVK
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEIDILASCDHPNIVK 71
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD-TLTEEEARFYVGETVLAIESIHKHNYIH 240
L +F + L++++E+ GG + +++ + LTE + + +T+ A+ +H + IH
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
RD+K N+L +G +KL+DFG+ + +Q +D
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRD------------------------ 167
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-----KKGYGMECDWWSLGAIMYEMLVGY 355
S +GTP ++APEV++ + Y + D WSLG + EM
Sbjct: 168 ----------------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
Query: 356 PPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKA 414
PP + PM KI + ++ S KD + K L NV+ R T ++
Sbjct: 212 PPHHELNPMRVLLKIAK-SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS---QLLQ 267
Query: 415 HPW 417
HP+
Sbjct: 268 HPF 270
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 140/337 (41%), Gaps = 77/337 (22%)
Query: 115 GADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV 174
G ++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIE 231
+ IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 232 SIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
H H +HRD+KP NLL++ G +KL+DFGL + G
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------G 154
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYE 350
PV R E + W R APE+LL K Y D WSLG I E
Sbjct: 155 VPV--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAE 196
Query: 351 MLVGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------L 385
M+ F D + +I V W T + FP+ A+ L
Sbjct: 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 256
Query: 386 SPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 257 DEDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 136/315 (43%), Gaps = 73/315 (23%)
Query: 100 EKKETEYMRLQRHKMGA---DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK----- 151
++K E Q+ K+G DDFE ++ +G G G V K +G V A K +
Sbjct: 5 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP 64
Query: 152 --KSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM 209
+++++R QV H E +S IV Y +F D + + ME++ GG + +L
Sbjct: 65 AIRNQIIRELQVLH---------ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 115
Query: 210 RKDTLTEEEARFYVGETVLA-IESI----HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLC 264
+ + E+ +G+ +A I+ + KH +HRD+KP N+L++ G +KL DFG
Sbjct: 116 KAGRIPEQ----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG-- 169
Query: 265 KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDY 324
+SG L +A S VGT Y
Sbjct: 170 ------------------VSGQLIDS-----------------------MANSFVGTRSY 188
Query: 325 IAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPE--E 382
++PE L Y ++ D WS+G + EM VG P S +++++ + P+
Sbjct: 189 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPS 248
Query: 383 AKLSPEAKDLISKLL 397
S E +D ++K L
Sbjct: 249 GVFSLEFQDFVNKCL 263
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 129/283 (45%), Gaps = 61/283 (21%)
Query: 80 KKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREK 139
KKL + E+ E+++ L +L +K+ + ++ DDFE ++ +G G G V K
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQ------KVGELKDDDFEKISELGAGNGGVVFKVSHK 55
Query: 140 ATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYL 199
+G V A +KL E ++ + E +L E +S IV Y +F D + + ME++
Sbjct: 56 PSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI----HKHNYIHRDIKPDNLLLDRNG 254
GG + +L + + E+ +G+ +A I+ + KH +HRD+KP N+L++ G
Sbjct: 114 DGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 169
Query: 255 HMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
+KL DFG +SG L +
Sbjct: 170 EIKLCDFG--------------------VSGQLIDS-----------------------M 186
Query: 315 AYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG-YP 356
A S VGT Y++PE L Y ++ D WS+G + EM VG YP
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L D+ T M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL-HQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 159
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 160 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 202 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 261
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 55/254 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G+FGEV ++K TG A+KK++ E+ R VE + A A + S IV LY
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR---VEELVA----CAGLSSPRIVPLYG 117
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ ++ ++ + ME L GG + L+ + L E+ A +Y+G+ + +E +H +H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 245 PDNLLLDRNG-HMKLSDFG--LCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
DN+LL +G L DFG LC LQ DG
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALC----------------------LQPDG---------- 205
Query: 302 EQLQHWQRNRRMLAYSTV-GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF-- 358
+ +L + GT ++APEV++ K + D WS +M ML G P+
Sbjct: 206 -------LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
Query: 359 YSDEPMSTCRKIVN 372
Y P+ C KI +
Sbjct: 259 YFRGPL--CLKIAS 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 55/254 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G+FGEV ++K TG A+KK++ E+ R VE + A A + S IV LY
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR---VEELVA----CAGLSSPRIVPLYG 133
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ ++ ++ + ME L GG + L+ + L E+ A +Y+G+ + +E +H +H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 245 PDNLLLDRNG-HMKLSDFG--LCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
DN+LL +G L DFG LC LQ DG
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALC----------------------LQPDG---------- 221
Query: 302 EQLQHWQRNRRMLAYSTV-GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF-- 358
+ +L + GT ++APEV++ K + D WS +M ML G P+
Sbjct: 222 -------LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
Query: 359 YSDEPMSTCRKIVN 372
Y P+ C KI +
Sbjct: 275 YFRGPL--CLKIAS 286
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 120/273 (43%), Gaps = 72/273 (26%)
Query: 100 EKKETEYMRLQRHKMGA---DDFEPLTMIGKGAFGEVRVCREKATGHVYA-------MKK 149
++K E Q+ K+G DDFE ++ +G G G V K +G V A +K
Sbjct: 48 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP 107
Query: 150 LKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM 209
+++++R QV H E +S IV Y +F D + + ME++ GG + +L
Sbjct: 108 AIRNQIIRELQVLH---------ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK 158
Query: 210 RKDTLTEEEARFYVGETVLA-IESI----HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLC 264
+ + E+ +G+ +A I+ + KH +HRD+KP N+L++ G +KL DFG
Sbjct: 159 KAGRIPEQ----ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG-- 212
Query: 265 KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDY 324
+SG L +A S VGT Y
Sbjct: 213 ------------------VSGQLIDS-----------------------MANSFVGTRSY 231
Query: 325 IAPEVLLKKGYGMECDWWSLGAIMYEMLVG-YP 356
++PE L Y ++ D WS+G + EM VG YP
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 55/254 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G+FGEV ++K TG A+KK++ E+ R VE + A A + S IV LY
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFR---VEELVA----CAGLSSPRIVPLYG 131
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIK 244
+ ++ ++ + ME L GG + L+ + L E+ A +Y+G+ + +E +H +H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 245 PDNLLLDRNG-HMKLSDFG--LCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
DN+LL +G L DFG LC LQ DG
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALC----------------------LQPDG---------- 219
Query: 302 EQLQHWQRNRRMLAYSTV-GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF-- 358
+ +L + GT ++APEV++ K + D WS +M ML G P+
Sbjct: 220 -------LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
Query: 359 YSDEPMSTCRKIVN 372
Y P+ C KI +
Sbjct: 273 YFRGPL--CLKIAS 284
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP+NLL++ G +KL+DFGL + G P
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----------------------GVP 159
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 160 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 202 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 261
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 62
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP+NLL++ G +KL+DFGL + G P
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----------------------GVP 157
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 158 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 200 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 259
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYTHEVVTLWYR----------------APEILLGXKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 62
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP+NLL++ G +KL+DFGL + G P
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----------------------GVP 157
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 158 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 200 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 259
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 68
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 163
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 164 V--RTYTHEVVTLWYR----------------APEILLGXKYYSTAVDIWSLGCIFAEMV 205
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 206 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 265
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 266 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 297
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP+NLL++ G +KL+DFGL + G P
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----------------------GVP 158
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 159 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 201 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 260
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 155
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 156 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 198 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP+NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 140/337 (41%), Gaps = 81/337 (24%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTL--LMRKDTLTE---EEARFYVGETVLAIE 231
IVKL + LYL+ E+L M L M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLS----MDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 232 SIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
H H +HRD+KP NLL++ G +KL+DFGL + G
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------G 157
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYE 350
PV R E + W R APE+LL K Y D WSLG I E
Sbjct: 158 VPV--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAE 199
Query: 351 MLVGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------L 385
M+ F D + +I V W T + FP+ A+ L
Sbjct: 200 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 259
Query: 386 SPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 260 DEDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 140/337 (41%), Gaps = 81/337 (24%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL-DTETEGVPSTAIREISLLKELNH 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTL--LMRKDTLTE---EEARFYVGETVLAIE 231
IVKL + LYL+ E+L M L M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLS----MDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 232 SIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
H H +HRD+KP NLL++ G +KL+DFGL + G
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------G 156
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYE 350
PV R E + W R APE+LL K Y D WSLG I E
Sbjct: 157 VPV--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAE 198
Query: 351 MLVGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------L 385
M+ F D + +I V W T + FP+ A+ L
Sbjct: 199 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 258
Query: 386 SPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DEDGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 141/335 (42%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E++ D+ T M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV-HQDLKTF-MDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 155
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 156 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 198 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 62
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 157
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 158 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 200 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 259
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 155
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 156 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 198 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 62
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 157
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 158 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 200 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 259
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 159
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 160 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 202 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 261
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 155
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 156 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 198 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 159
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 160 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 202 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 261
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 158
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 159 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 201 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 260
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 68
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 163
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 164 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 205
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 206 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 265
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 266 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 297
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 65
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 160
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 161 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 203 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 262
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 263 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 158
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 159 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 201 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 260
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 261 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 292
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 62
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 157
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 158 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 200 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 259
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 260 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 155
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 156 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 198 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 139/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 65
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 160
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 161 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 203 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 262
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 263 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 294
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 138/333 (41%), Gaps = 77/333 (23%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
+ + L+S++L + +R+ K A AHP+F+
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQ 288
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 58/284 (20%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
A DFE + ++G+GAFG+V R YA+KK++ +E ++ + +E LLA ++
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLN 60
Query: 176 SNCIVKLYCSF-------------QDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFY 222
+V+ Y ++ + L++ EY + L+ ++ + + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 223 VGETVL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK----PLDCSNLQEKDF 277
+ +L A+ IH IHR++KP N+ +D + ++K+ DFGL K LD L +
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ-- 178
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YG 336
NL G+ SD S +GT Y+A EVL G Y
Sbjct: 179 ----NLPGS--SDNLT-----------------------SAIGTAXYVATEVLDGTGHYN 209
Query: 337 MECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFP 380
+ D +SLG I +E + YP E ++ +K+ + ++FP
Sbjct: 210 EKIDXYSLGIIFFEXI--YPFSTGXERVNILKKLRS--VSIEFP 249
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 126/259 (48%), Gaps = 31/259 (11%)
Query: 102 KETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRG 159
+E Y + ++ D++ +IG+G++G V + +K T A+KK+ + +++
Sbjct: 11 RENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--- 67
Query: 160 QVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYL-----YLIMEYLPGGDMMTLLMRKDTL 214
+ + E +L + S+ I++LY D+ L Y+++E + D+ L L
Sbjct: 68 DCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFL 126
Query: 215 TEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQE 274
TEE + + +L IH+ IHRD+KP N LL+++ +K+ DFGL + ++ E
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN----SE 182
Query: 275 KDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE-VLLKK 333
KD +N+ L+ + P + ++QL S V T Y APE +LL++
Sbjct: 183 KD----TNIVNDLEENEEPGPHNKNLKKQLT-----------SHVVTRWYRAPELILLQE 227
Query: 334 GYGMECDWWSLGAIMYEML 352
Y D WS G I E+L
Sbjct: 228 NYTKSIDIWSTGCIFAELL 246
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 137/335 (40%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+KK++ + G E +LL E++
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNH 64
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E++ + M LT + Y+ + + +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV--DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 159
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 160 V--RTYXHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 353 VGYPPFYSDEPMSTCRKI---------VNWRTHLKFPEE------------AKLSP---- 387
F D + +I V W P+ +K+ P
Sbjct: 202 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 261
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 262 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 138/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+ K++ + G E +LL E++
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNH 61
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 156
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 157 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 199 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 258
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 259 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 138/335 (41%), Gaps = 77/335 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
++F+ + IG+G +G V R K TG V A+ K++ + G E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNH 60
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE---EEARFYVGETVLAIESI 233
IVKL + LYL+ E+L + M LT + Y+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL--HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H H +HRD+KP NLL++ G +KL+DFGL + G P
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----------------------GVP 155
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
V R E + W R APE+LL K Y D WSLG I EM+
Sbjct: 156 V--RTYTHEVVTLWYR----------------APEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 353 VGYPPFYSDEPMSTCRKI---------VNW--RTHL-----KFPEEAK---------LSP 387
F D + +I V W T + FP+ A+ L
Sbjct: 198 TRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDE 257
Query: 388 EAKDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
+ + L+S++L + +R+ K A AHP+F+ +
Sbjct: 258 DGRSLLSQMLHYDPNKRISAKAA---LAHPFFQDV 289
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 61/264 (23%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN-LLAEVD 175
DD+E +IG GA V+ Y K K+ ++R +E + + LL E+
Sbjct: 15 DDYELQEVIGSGATAVVQAA--------YCAPK-KEKVAIKRINLEKCQTSMDELLKEIQ 65
Query: 176 --SNC----IVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--------MRKDTLTEEEARF 221
S C IV Y SF + L+L+M+ L GG ++ ++ + L E
Sbjct: 66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ E + +E +HK+ IHRD+K N+LL +G ++++DFG+ L + G
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL----------ATGG 175
Query: 282 NLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECD 340
+++ R + + VGTP ++APEV+ + +GY + D
Sbjct: 176 DIT--------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 209
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPM 364
WS G E+ G P++ PM
Sbjct: 210 IWSFGITAIELATGAAPYHKYPPM 233
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 115/268 (42%), Gaps = 72/268 (26%)
Query: 105 EYMRLQRHKMGA---DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK-------KSE 154
E Q+ K+G DDFE ++ +G G G V + + +G + A K + +++
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ 60
Query: 155 MLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL 214
++R QV H E +S IV Y +F D + + ME++ GG + +L +
Sbjct: 61 IIRELQVLH---------ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI 111
Query: 215 TEEEARFYVGETVLAIESI-----HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDC 269
EE +G+ +A+ KH +HRD+KP N+L++ G +KL DFG
Sbjct: 112 PEE----ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG------- 160
Query: 270 SNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEV 329
+SG L +A S VGT Y+APE
Sbjct: 161 -------------VSGQLIDS-----------------------MANSFVGTRSYMAPER 184
Query: 330 LLKKGYGMECDWWSLGAIMYEMLVG-YP 356
L Y ++ D WS+G + E+ VG YP
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 74/332 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
++ L +G+G +G V ++ + G + A+K+++ + G E +LL E+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IV L + L L+ E++ L K L + + + Y+ + + + H+H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++ +G +KL+DFGL + G PV R
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF-----------------------GIPV--RS 175
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 357
E + W R AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 176 YTHEVVTLWYR----------------APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 358 F---YSDEPMSTCRKIVNWRTHLKFPEEAKL-----------------------SPEAKD 391
F D+ + I+ ++P+ +L E D
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGID 279
Query: 392 LISKLLC-NVEQRLGTKGADEIKAHPWFKGIE 422
L+S +LC + +R+ + A HP+FK ++
Sbjct: 280 LLSNMLCFDPNKRISARDA---MNHPYFKDLD 308
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 61/264 (23%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN-LLAEVD 175
DD+E +IG GA V+ Y K K+ ++R +E + + LL E+
Sbjct: 10 DDYELQEVIGSGATAVVQAA--------YCAPK-KEKVAIKRINLEKCQTSMDELLKEIQ 60
Query: 176 --SNC----IVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--------MRKDTLTEEEARF 221
S C IV Y SF + L+L+M+ L GG ++ ++ + L E
Sbjct: 61 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ E + +E +HK+ IHRD+K N+LL +G ++++DFG+ L + G
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL----------ATGG 170
Query: 282 NLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECD 340
+++ R + + VGTP ++APEV+ + +GY + D
Sbjct: 171 DIT--------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 204
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPM 364
WS G E+ G P++ PM
Sbjct: 205 IWSFGITAIELATGAAPYHKYPPM 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 47/252 (18%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSE-------MLRRGQV-EHVKAE 167
+ DF+ +++G+GA+G V K TG + A+KK++ + LR ++ +H K E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 168 RNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETV 227
N++ + ++ SF++ +Y+I E + + ++ L+++ ++++ +T+
Sbjct: 70 -NIITIFN----IQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
A++ +H N IHRD+KP NLL++ N +K+ DFGL + +D S
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA---------------- 166
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGA 346
+ P QQ + + V T Y APEV+L Y D WS G
Sbjct: 167 ADNSEPTG----QQSGMTEY-----------VATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 347 IMYEMLVGYPPF 358
I+ E+ + P F
Sbjct: 212 ILAELFLRRPIF 223
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 74/332 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
++ L +G+G +G V ++ + G + A+K+++ + G E +LL E+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPN 80
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IV L + L L+ E++ L K L + + + Y+ + + + H+H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++ +G +KL+DFGL + G PV R
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAF-----------------------GIPV--RS 175
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 357
E + W R AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 176 YTHEVVTLWYR----------------APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
Query: 358 F---YSDEPMSTCRKIVNWRTHLKFPEEAKL-----------------------SPEAKD 391
F D+ + I+ ++P+ +L E D
Sbjct: 220 FPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGID 279
Query: 392 LISKLLC-NVEQRLGTKGADEIKAHPWFKGIE 422
L+S +LC + +R+ + A HP+FK ++
Sbjct: 280 LLSNMLCFDPNKRISARDA---MNHPYFKDLD 308
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 47/252 (18%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSE-------MLRRGQV-EHVKAE 167
+ DF+ +++G+GA+G V K TG + A+KK++ + LR ++ +H K E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 168 RNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETV 227
N++ + ++ SF++ +Y+I E + + ++ L+++ ++++ +T+
Sbjct: 70 -NIITIFN----IQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
A++ +H N IHRD+KP NLL++ N +K+ DFGL + +D S S +G
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD------NSEPTGQQ 176
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGA 346
VA R W R APEV+L Y D WS G
Sbjct: 177 SGMTEXVATR---------WYR----------------APEVMLTSAKYSRAMDVWSCGC 211
Query: 347 IMYEMLVGYPPF 358
I+ E+ + P F
Sbjct: 212 ILAELFLRRPIF 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 47/252 (18%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSE-------MLRRGQV-EHVKAE 167
+ DF+ +++G+GA+G V K TG + A+KK++ + LR ++ +H K E
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 168 RNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETV 227
N++ + ++ SF++ +Y+I E + + ++ L+++ ++++ +T+
Sbjct: 70 -NIITIFN----IQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
A++ +H N IHRD+KP NLL++ N +K+ DFGL + +D S N
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA--------ADNSEPTG 174
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGA 346
Q G M+ + V T Y APEV+L Y D WS G
Sbjct: 175 QQSG---------------------MVEF--VATRWYRAPEVMLTSAKYSRAMDVWSCGC 211
Query: 347 IMYEMLVGYPPF 358
I+ E+ + P F
Sbjct: 212 ILAELFLRRPIF 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 55/246 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
DDFE ++ +G G G V K +G V A +KL E ++ + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI-- 233
IV Y +F D + + ME++ GG + +L + + E+ +G+ +A I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTY 119
Query: 234 --HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
KH +HRD+KP N+L++ G +KL DFG +SG L
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG--------------------VSGQLIDS- 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 352 LVG-YP 356
VG YP
Sbjct: 197 AVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 55/246 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
DDFE ++ +G G G V K +G V A +KL E ++ + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI-- 233
IV Y +F D + + ME++ GG + +L + + E+ +G+ +A I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTY 119
Query: 234 --HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
KH +HRD+KP N+L++ G +KL DFG +SG L
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG--------------------VSGQLIDS- 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 352 LVG-YP 356
VG YP
Sbjct: 197 AVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 55/246 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
DDFE ++ +G G G V K +G V A +KL E ++ + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI-- 233
IV Y +F D + + ME++ GG + +L + + E+ +G+ +A I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTY 119
Query: 234 --HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
KH +HRD+KP N+L++ G +KL DFG +SG L
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG--------------------VSGQLIDS- 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 352 LVG-YP 356
VG YP
Sbjct: 197 AVGRYP 202
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 47/241 (19%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSE---MLRRGQVEHVKAERNLLAEVD 175
+E + IG+G++G V CR + TG + A+KK +SE ++++ + ++ +L ++
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR----MLKQLK 60
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
+V L F+ L+L+ EY + L + + E + +T+ A+ HK
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
HN IHRD+KP+N+L+ ++ +KL DFG + L+G VA
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFAR----------------LLTGPSDYYDDEVA 164
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY 355
R W R+ +L T YG D W++G + E+L G
Sbjct: 165 TR---------WYRSPELLVGDT---------------QYGPPVDVWAIGCVFAELLSGV 200
Query: 356 P 356
P
Sbjct: 201 P 201
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAE 173
+D +E ++G G EV + R+ A+K L+ L R +++ R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 174 VDSNCIVKLYCSFQDDE----YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ IV +Y + + + Y++MEY+ G + ++ + +T + A + + A
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H++ IHRD+KP N+++ +K+ DFG+ + A+
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------------------AIAD 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
G V TQ + +GT Y++PE D +SLG ++Y
Sbjct: 169 SGNSV----TQTA--------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK---LSPEAKDLISKLLC-NVEQRLG 405
E+L G PPF D P+S + V P A+ LS + ++ K L N E R
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 406 TKG---ADEIKAH 415
T AD ++ H
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 60/288 (20%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
DDFE ++ +G G G V K +G V A +KL E ++ + E +L E +S
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 66
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI-- 233
IV Y +F D + + ME++ GG + +L + + E+ +G+ +A I+ +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTY 122
Query: 234 --HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
KH +HRD+KP N+L++ G +KL DFG +SG L +
Sbjct: 123 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG--------------------VSGQLIDE- 161
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+A VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 162 ----------------------MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPE--EAKLSPEAKDLISKLL 397
VG Y PM+ +++++ + P+ A S E +D ++K L
Sbjct: 200 AVGR---YPRPPMAIF-ELLDYIVNEPPPKLPSAVFSLEFQDFVNKCL 243
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 55/246 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
DDFE ++ +G G G V K +G V A +KL E ++ + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI-- 233
IV Y +F D + + ME++ GG + +L + + E+ +G+ +A I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTY 119
Query: 234 --HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
KH +HRD+KP N+L++ G +KL DFG +SG L
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG--------------------VSGQLIDS- 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 352 LVG-YP 356
VG YP
Sbjct: 197 AVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 55/246 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
DDFE ++ +G G G V K +G V A +KL E ++ + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-IESI-- 233
IV Y +F D + + ME++ GG + +L + + E+ +G+ +A I+ +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ----ILGKVSIAVIKGLTY 119
Query: 234 --HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
KH +HRD+KP N+L++ G +KL DFG +SG L
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFG--------------------VSGQLIDS- 158
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+A S VGT Y++PE L Y ++ D WS+G + EM
Sbjct: 159 ----------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 352 LVG-YP 356
VG YP
Sbjct: 197 AVGRYP 202
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 94/342 (27%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK---SEMLRRGQVEHVKAERNLLAEV 174
D +P +G GA+G V + TG A+KKL + SE+ + E LL +
Sbjct: 29 DLQP---VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK----RAYRELRLLKHM 81
Query: 175 DSNCIVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
++ L F DE L YL+M ++ G + LM+ + L E+ +F V + +
Sbjct: 82 RHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLK 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
+ IH IHRD+KP NL ++ + +K+ DFGL + D S + G +
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD------------SEMXGXV- 186
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
+ W R APEV+L Y D WS+G I
Sbjct: 187 ---------------VTRWYR----------------APEVILNWMRYTQTVDIWSVGCI 215
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIVNW-----------------RTHLK-FPEEAK----- 384
M EM+ G F + + ++I+ + ++K PE K
Sbjct: 216 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFAS 275
Query: 385 ----LSPEAKDLISKLLC-NVEQRLGTKGADEIKAHPWFKGI 421
SP A +L+ K+L + EQR+ A E AHP+F+ +
Sbjct: 276 ILTNASPLAVNLLEKMLVLDAEQRV---TAGEALAHPYFESL 314
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 129/328 (39%), Gaps = 73/328 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+E L IG+G +G V + + T + A+K+++ + G E LL E+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IV+L+ D+ L L+ E+ L E + ++ + + + H N
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++RNG +KL+DFGL + G PV R
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAF-----------------------GIPV--RC 157
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 357
E + W R P+VL K Y D WS G I E+ P
Sbjct: 158 YSAEVVTLWYR----------------PPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
Query: 358 FY-------------------SDEPMSTCRKIVNWRTHLKFPEEA-------KLSPEAKD 391
+ ++E + K+ +++ + +P KL+ +D
Sbjct: 202 LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRD 261
Query: 392 LISKLL-CNVEQRLGTKGADEIKAHPWF 418
L+ LL CN QR+ A+E HP+F
Sbjct: 262 LLQNLLKCNPVQRI---SAEEALQHPYF 286
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAE 173
+D +E ++G G EV + R+ A+K L+ L R +++ R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 174 VDSNCIVKLYCSFQDDE----YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ IV +Y + + + Y++MEY+ G + ++ + +T + A + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H++ IHRD+KP N+++ +K+ DFG+ + A+
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------------------AIAD 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
G V TQ + +GT Y++PE D +SLG ++Y
Sbjct: 169 SGNSV----TQTA--------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK---LSPEAKDLISKLLC-NVEQRLG 405
E+L G PPF D P+S + V P A+ LS + ++ K L N E R
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 406 TKG---ADEIKAH 415
T AD ++ H
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAE 173
+D +E ++G G EV + R+ A+K L+ L R +++ R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 174 VDSNCIVKLYCSFQDDE----YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ IV +Y + + + Y++MEY+ G + ++ + +T + A + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H++ IHRD+KP N+++ +K+ DFG+ + A+
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------------------AIAD 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
G V TQ + +GT Y++PE D +SLG ++Y
Sbjct: 169 SGNSV----TQTA--------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK---LSPEAKDLISKLLC-NVEQRLG 405
E+L G PPF D P+S + V P A+ LS + ++ K L N E R
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 406 TKG---ADEIKAH 415
T AD ++ H
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 61/306 (19%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH-----VKAERNLLAE 173
+ ++ +G GAFG V +K +K +KK ++L +E V E +L+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 174 VDSNCIVKLYCSFQDDEYLYLIME-YLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
V+ I+K+ F++ + L+ME + G D+ + R L E A + + V A+
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ + IHRDIK +N+++ + +KL DFG S A G+
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDFG---------------------SAAYLERGK 184
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEM 351
L Y+ GT +Y APEVL+ Y G E + WSLG +Y +
Sbjct: 185 ---------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL 223
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
+ + + P + V H + +S E L+S LL V +R T ++
Sbjct: 224 V------FEENPFCELEETVEAAIHPPY----LVSKELMSLVSGLLQPVPERRTT--LEK 271
Query: 412 IKAHPW 417
+ PW
Sbjct: 272 LVTDPW 277
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAE 173
+D +E ++G G EV + R+ A+K L+ L R +++ R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 174 VDSNCIVKLYCSFQDDE----YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ IV +Y + + + Y++MEY+ G + ++ + +T + A + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H++ IHRD+KP N+L+ +K+ DFG+ + A+
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR--------------------AIAD 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
G N + +GT Y++PE D +SLG ++Y
Sbjct: 169 SG------------------NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK---LSPEAKDLISKLLC-NVEQRLG 405
E+L G PPF D P+S + V P A+ LS + ++ K L N E R
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 406 TKG---ADEIKAH 415
T AD ++ H
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 128/328 (39%), Gaps = 73/328 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+E L IG+G +G V + + T + A+K+++ + G E LL E+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IV+L+ D+ L L+ E+ L E + ++ + + + H N
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++RNG +KL++FGL + G PV R
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAF-----------------------GIPV--RC 157
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEML-VGYP 356
E + W R P+VL K Y D WS G I E+ G P
Sbjct: 158 YSAEVVTLWYR----------------PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
Query: 357 PFYSDEPMSTCRKIV---------NWRTHLKFPE----------------EAKLSPEAKD 391
F ++ ++I W + K P+ KL+ +D
Sbjct: 202 LFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRD 261
Query: 392 LISKLL-CNVEQRLGTKGADEIKAHPWF 418
L+ LL CN QR+ A+E HP+F
Sbjct: 262 LLQNLLKCNPVQRI---SAEEALQHPYF 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAE 173
+D +E ++G G EV + R+ A+K L+ L R +++ R A
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 85
Query: 174 VDSNCIVKLYCSFQDDE----YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ IV +Y + + + Y++MEY+ G + ++ + +T + A + + A
Sbjct: 86 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 145
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H++ IHRD+KP N+++ +K+ DFG+ + A+
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------------------AIAD 185
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
G V TQ + +GT Y++PE D +SLG ++Y
Sbjct: 186 SGNSV----TQTA--------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 227
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK---LSPEAKDLISKLLC-NVEQRLG 405
E+L G PPF D P+S + V P A+ LS + ++ K L N E R
Sbjct: 228 EVLTGEPPFTGDSPVSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 284
Query: 406 TKG---ADEIKAH 415
T AD ++ H
Sbjct: 285 TAAEMRADLVRVH 297
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 52/247 (21%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKS--------EMLRRGQV-EHVKA 166
D++E + IG GA+G V R + TG A+KK+ + LR ++ +H K
Sbjct: 54 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
+ N++A D I++ + + + +Y++++ + D+ ++ LT E R+++ +
Sbjct: 114 D-NIIAIKD---ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ ++ +H IHRD+KP NLL++ N +K+ DFG+ + L S + + F
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF--------- 219
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 345
M Y V T Y APE++L Y D WS+G
Sbjct: 220 --------------------------MTEY--VATRWYRAPELMLSLHEYTQAIDLWSVG 251
Query: 346 AIMYEML 352
I EML
Sbjct: 252 CIFGEML 258
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 133/328 (40%), Gaps = 73/328 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+ L IG+G +G V + G +A+KK++ E G E ++L E+ +
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNY-GETFALKKIR-LEKEDEGIPSTTIREISILKELKHSN 61
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IVKLY + L L+ E+L L + + L A+ ++ + + I H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++R G +K++DFGL + G PV R+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAF-----------------------GIPV--RK 156
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 357
E + W R AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 157 YTHEVVTLWYR----------------APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
Query: 358 F----YSDEPMSTCRKI-----VNWRTHLKFPEE----------------AKLSPEAKDL 392
F +D+ M R + NW + P+ L DL
Sbjct: 201 FPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDL 260
Query: 393 ISKLL-CNVEQRLGTKGADEIKAHPWFK 419
+SK+L + QR+ K A E H +FK
Sbjct: 261 LSKMLKLDPNQRITAKQALE---HAYFK 285
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 52/247 (21%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKS--------EMLRRGQV-EHVKA 166
D++E + IG GA+G V R + TG A+KK+ + LR ++ +H K
Sbjct: 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
+ N++A D I++ + + + +Y++++ + D+ ++ LT E R+++ +
Sbjct: 113 D-NIIAIKD---ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ ++ +H IHRD+KP NLL++ N +K+ DFG+ + L S + + F
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF--------- 218
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLG 345
M Y V T Y APE++L Y D WS+G
Sbjct: 219 --------------------------MTEY--VATRWYRAPELMLSLHEYTQAIDLWSVG 250
Query: 346 AIMYEML 352
I EML
Sbjct: 251 CIFGEML 257
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 133/328 (40%), Gaps = 73/328 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+ L IG+G +G V + G +A+KK++ E G E ++L E+ +
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNY-GETFALKKIR-LEKEDEGIPSTTIREISILKELKHSN 61
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IVKLY + L L+ E+L L + + L A+ ++ + + I H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++R G +K++DFGL + G PV R+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAF-----------------------GIPV--RK 156
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 357
E + W R AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 157 YTHEVVTLWYR----------------APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPL 200
Query: 358 F----YSDEPMSTCRKI-----VNWRTHLKFPEE----------------AKLSPEAKDL 392
F +D+ M R + NW + P+ L DL
Sbjct: 201 FPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDL 260
Query: 393 ISKLL-CNVEQRLGTKGADEIKAHPWFK 419
+SK+L + QR+ K A E H +FK
Sbjct: 261 LSKMLKLDPNQRITAKQALE---HAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 133/328 (40%), Gaps = 73/328 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+ L IG+G +G V + G +A+KK++ E G E ++L E+ +
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNY-GETFALKKIR-LEKEDEGIPSTTIREISILKELKHSN 61
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
IVKLY + L L+ E+L L + + L A+ ++ + + I H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+KP NLL++R G +K++DFGL + G PV R+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAF-----------------------GIPV--RK 156
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPP 357
E + W R AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 157 YTHEIVTLWYR----------------APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
Query: 358 F----YSDEPMSTCRKI-----VNWRTHLKFPEE----------------AKLSPEAKDL 392
F +D+ M R + NW + P+ L DL
Sbjct: 201 FPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDL 260
Query: 393 ISKLL-CNVEQRLGTKGADEIKAHPWFK 419
+SK+L + QR+ K A E H +FK
Sbjct: 261 LSKMLKLDPNQRITAKQALE---HAYFK 285
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 97/255 (38%), Gaps = 48/255 (18%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IG G+FG V R+ V A+KK+ S + + + E L ++
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
++ + + +L+MEY G L + K L E E + + +H HN
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRD+K N+LL G +KL DFG +AP
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFG---------------------------SASIMAP-- 167
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYEMLVGY 355
A VGTP ++APEV+L Y + D WSLG E+
Sbjct: 168 ----------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211
Query: 356 PPFYSDEPMSTCRKI 370
PP ++ MS I
Sbjct: 212 PPLFNMNAMSALYHI 226
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 54/252 (21%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKL-----KKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G G V + + A+K + +K E L+R + E + +++ I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR-----FEREVHNSSQLSHQNI 73
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYI 239
V + ++D+ YL+MEY+ G + + L+ + A + + + I+ H +
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRT 299
HRDIKP N+L+D N +K+ DFG+ K L ++L
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-------------------------- 167
Query: 300 QQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGM-EC-DWWSLGAIMYEMLVGYPP 357
Q H +GT Y +PE KG EC D +S+G ++YEMLVG PP
Sbjct: 168 ---QTNH-----------VLGTVQYFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPP 211
Query: 358 FYSDEPMSTCRK 369
F + +S K
Sbjct: 212 FNGETAVSIAIK 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 96/255 (37%), Gaps = 48/255 (18%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F L IG G+FG V R+ V A+KK+ S + + + E L ++
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
++ + + +L+MEY G L + K L E E + + +H HN
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRD+K N+LL G +KL DFG + +N
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN--------------------------- 208
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYEMLVGY 355
VGTP ++APEV+L Y + D WSLG E+
Sbjct: 209 ------------------XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250
Query: 356 PPFYSDEPMSTCRKI 370
PP ++ MS I
Sbjct: 251 PPLFNMNAMSALYHI 265
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAE 173
+D +E ++G G EV + R+ A+K L+ L R +++ R A
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQNAAA 68
Query: 174 VDSNCIVKLYCSFQDDE----YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ IV +Y + + + Y++MEY+ G + ++ + +T + A + + A
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQA 128
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ H++ IHRD+KP N+++ +K+ DFG+ + A+
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR--------------------AIAD 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
G V TQ + +GT Y++PE D +SLG ++Y
Sbjct: 169 SGNSV----TQTA--------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 350 EMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAK---LSPEAKDLISKLLC-NVEQRLG 405
E+L G PPF D P S + V P A+ LS + ++ K L N E R
Sbjct: 211 EVLTGEPPFTGDSPDSVAYQHVRED---PIPPSARHEGLSADLDAVVLKALAKNPENRYQ 267
Query: 406 TKG---ADEIKAH 415
T AD ++ H
Sbjct: 268 TAAEMRADLVRVH 280
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 142/338 (42%), Gaps = 77/338 (22%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVE 162
TE + Q + + L IG G +V +V EK +YA+K + L +
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQ 68
Query: 163 HVKAERNLLAEVD-----SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEE 217
+ + RN +A ++ S+ I++LY D+Y+Y++ME D+ + L +K ++
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 218 EARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDF 277
E + Y + A+ +IH+H +H D+KP N L+ +G +KL DFG
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------- 171
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGM 337
++ +Q D V S VGT +Y+ PE +
Sbjct: 172 -----IANQMQPDTTSVVKD-------------------SQVGTVNYMPPEAIKDMSSSR 207
Query: 338 E-----------CDWWSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKL 385
E D WSLG I+Y M G PF +S I++ ++FP+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---- 263
Query: 386 SPEAKDLISKLLCNV----EQRLGTKGADEIKAHPWFK 419
PE KDL L C + +QR+ E+ AHP+ +
Sbjct: 264 IPE-KDLQDVLKCCLKRDPKQRISIP---ELLAHPYVQ 297
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 28/244 (11%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEV 174
D++E +IG+G++G V + +K A+KK+ + +++ + + E +L +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI---DCKRILREITILNRL 84
Query: 175 DSNCIVKLYCSFQDDEYL-----YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
S+ I++L+ ++ L Y+++E + D+ L LTE+ + + +L
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+ IH+ IHRD+KP N LL+++ +K+ DFGL + ++ +KD I ++L +
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN----SDKDIHIVNDLEEK-EE 198
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAIM 348
+ P + ++QL S V T Y APE +LL++ Y D WS G I
Sbjct: 199 NEEPGPHNKNLKKQLT-----------SHVVTRWYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 349 YEML 352
E+L
Sbjct: 248 AELL 251
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 142/338 (42%), Gaps = 77/338 (22%)
Query: 104 TEYMRLQRHKMGADDFEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVE 162
TE + Q + + L IG G +V +V EK +YA+K + L +
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQ 68
Query: 163 HVKAERNLLAEVD-----SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEE 217
+ + RN +A ++ S+ I++LY D+Y+Y++ME D+ + L +K ++
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 218 EARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDF 277
E + Y + A+ +IH+H +H D+KP N L+ +G +KL DFG
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------- 171
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGM 337
++ +Q D V S VGT +Y+ PE +
Sbjct: 172 -----IANQMQPDXXXVVKD-------------------SQVGTVNYMPPEAIKDMSSSR 207
Query: 338 E-----------CDWWSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKL 385
E D WSLG I+Y M G PF +S I++ ++FP+
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD---- 263
Query: 386 SPEAKDLISKLLCNV----EQRLGTKGADEIKAHPWFK 419
PE KDL L C + +QR+ E+ AHP+ +
Sbjct: 264 IPE-KDLQDVLKCCLKRDPKQRISIP---ELLAHPYVQ 297
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 73/276 (26%)
Query: 102 KETEYMRL--QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRG 159
K+T Y+ + QR++ +D E L +G G G+V R + TGHV A+K++++S G
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS-----G 62
Query: 160 QVEHVKAERNLLAEVD-----SNC--IVKLYCSFQDDEYLYLIMEYLPG----------G 202
E + +L ++D +C IV+ + +F + +++ ME + G
Sbjct: 63 NKEE---NKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQG 119
Query: 203 DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFG 262
+ ++ K T+ +A +Y+ E KH IHRD+KP N+LLD G +KL DFG
Sbjct: 120 PIPERILGKMTVAIVKALYYLKE---------KHGVIHRDVKPSNILLDERGQIKLCDFG 170
Query: 263 LCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTP 322
+SG L D + R+ AY P
Sbjct: 171 --------------------ISGRLVDD--------------KAKDRSAGCAAYM---AP 193
Query: 323 DYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
+ I P K Y + D WSLG + E+ G P+
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 56/280 (20%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK--KSEMLRRGQVEHVKAERNLLAEVD 175
DFEP+ +G+G FG V + K YA+K+++ E+ R + VKA LA+++
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA----LAKLE 61
Query: 176 SNCIVKLYCSFQDDE------------YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
IV+ + ++ + YLY+ M+ ++ + + T+ E E +
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 224 G---ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
+ A+E +H +HRD+KP N+ + +K+ DFGL +D E++ ++
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD---QDEEEQTVL 178
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
+ + P R T Q VGT Y++PE + Y + D
Sbjct: 179 TPM---------PAYARHTGQ-----------------VGTKLYMSPEQIHGNSYSHKVD 212
Query: 341 WWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFP 380
+SLG I++E+L PF + M R + + R +LKFP
Sbjct: 213 IFSLGLILFELLY---PFSTQ--MERVRTLTDVR-NLKFP 246
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 33/231 (14%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKK-SEMLRRGQVEHVKAERNLLAEVDSNCIVKL 182
++GKG FG+ + TG V MK+L + E +R ++ VK R L + ++K
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL----EHPNVLKF 72
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF-YVGETVLAIESIHKHNYIHR 241
D+ L I EY+ GG + ++ D+ R + + + +H N IHR
Sbjct: 73 IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
D+ N L+ N ++ ++DFGL R + +TQ
Sbjct: 133 DLNSHNCLVRENKNVVVADFGL---------------------------ARLMVDEKTQP 165
Query: 302 EQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
E L+ ++ R Y+ VG P ++APE++ + Y + D +S G ++ E++
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 77/323 (23%)
Query: 119 FEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-- 175
+ L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 176 ---SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
S+ I++LY D+Y+Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
IH+H +H D+KP N L+ +G +KL DFG ++ +Q D
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------------IANQMQPDTT 209
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 341
V S VGT +Y+ PE + E D
Sbjct: 210 SVVKD-------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250
Query: 342 WSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-- 398
WSLG I+Y M G PF +S I++ ++FP+ PE KDL L C
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQDVLKCCL 305
Query: 399 --NVEQRLGTKGADEIKAHPWFK 419
+ +QR+ E+ AHP+ +
Sbjct: 306 KRDPKQRISIP---ELLAHPYVQ 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 77/323 (23%)
Query: 119 FEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-- 175
+ L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 64
Query: 176 ---SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
S+ I++LY D+Y+Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
IH+H +H D+KP N L+ +G +KL DFG ++ +Q D
Sbjct: 124 IHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------------IANQMQPDTT 162
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 341
V S VGT +Y+ PE + E D
Sbjct: 163 SVVKD-------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 203
Query: 342 WSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
WSLG I+Y M G PF +S I++ ++FP+ PE KDL L C +
Sbjct: 204 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQDVLKCCL 258
Query: 401 ----EQRLGTKGADEIKAHPWFK 419
+QR+ E+ AHP+ +
Sbjct: 259 KRDPKQRISIP---ELLAHPYVQ 278
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 77/323 (23%)
Query: 119 FEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-- 175
+ L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 176 ---SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
S+ I++LY D+Y+Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
IH+H +H D+KP N L+ +G +KL DFG ++ +Q D
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------------IANQMQPDTT 209
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 341
V S VGT +Y+ PE + E D
Sbjct: 210 SVVKD-------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250
Query: 342 WSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-- 398
WSLG I+Y M G PF +S I++ ++FP+ PE KDL L C
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQDVLKCCL 305
Query: 399 --NVEQRLGTKGADEIKAHPWFK 419
+ +QR+ E+ AHP+ +
Sbjct: 306 KRDPKQRISIP---ELLAHPYVQ 325
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E + P D+ + + L EE AR + + + A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 167
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 168 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 211 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 258
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 259 HPWMQDV 265
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 82/339 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCRE-KATGHVYAMKKLK---KSEMLRRGQVEHVKAERNLLAEV 174
+E + IG+GA+G+V R+ K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 175 DSNCIVKLY--CSFQDDEY---LYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETV 227
N +V+L+ C+ + L L+ E++ D+ T L + + + E + + + +
Sbjct: 73 HPN-VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
++ +H H +HRD+KP N+L+ +G +KL+DFGL +
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR---------------------- 168
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+ +Q M S V T Y APEVLL+ Y D WS+G I
Sbjct: 169 ----------------IYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIV---------NWRTHLKFPEEAKLSPEA--------- 389
EM P F + KI+ +W + P +A S A
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 390 -----KDLISKLLC-NVEQRLGTKGADEIKAHPWFKGIE 422
KDL+ K L N +R+ A +HP+F+ +E
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSA---LSHPYFQDLE 304
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKSQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGLC
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLC------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 122/307 (39%), Gaps = 67/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDSNC-- 178
++GKG FG V A+K + ++ +L + E LL +V +
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 179 --IVKLYCSFQDDEYLYLIMEY-LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
+++L F+ E L++E LP D+ + K L E +R + G+ V AI+ H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 236 HNYIHRDIKPDNLLLD-RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
+HRDIK +N+L+D R G KL DFG SGAL D
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFG---------------------SGALLHDE--- 193
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPEVLLKKGY-GMECDWWSLGAIMYEML 352
Y+ GT Y PE + + Y + WSLG ++Y+M+
Sbjct: 194 --------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEI 412
G PF D+ + L FP A +SP+ LI + C + +EI
Sbjct: 234 CGDIPFERDQEIL--------EAELHFP--AHVSPDCCALIRR--CLAPKPSSRPSLEEI 281
Query: 413 KAHPWFK 419
PW +
Sbjct: 282 LLDPWMQ 288
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 77/323 (23%)
Query: 119 FEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-- 175
+ L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 67
Query: 176 ---SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
S+ I++LY D+Y+Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
IH+H +H D+KP N L+ +G +KL DFG ++ +Q D
Sbjct: 127 IHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------------IANQMQPDTT 165
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 341
V S VGT +Y+ PE + E D
Sbjct: 166 SVVKD-------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 206
Query: 342 WSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
WSLG I+Y M G PF +S I++ ++FP+ PE KDL L C +
Sbjct: 207 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQDVLKCCL 261
Query: 401 ----EQRLGTKGADEIKAHPWFK 419
+QR+ E+ AHP+ +
Sbjct: 262 KRDPKQRISIP---ELLAHPYVQ 281
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 77/323 (23%)
Query: 119 FEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-- 175
+ L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 63
Query: 176 ---SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
S+ I++LY D+Y+Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
IH+H +H D+KP N L+ +G +KL DFG ++ +Q D
Sbjct: 123 IHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------------IANQMQPDTT 161
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 341
V S VGT +Y+ PE + E D
Sbjct: 162 SVVKD-------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 202
Query: 342 WSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNV 400
WSLG I+Y M G PF +S I++ ++FP+ PE KDL L C +
Sbjct: 203 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQDVLKCCL 257
Query: 401 ----EQRLGTKGADEIKAHPWFK 419
+QR+ E+ AHP+ +
Sbjct: 258 KRDPKQRISIP---ELLAHPYVQ 277
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 136/323 (42%), Gaps = 77/323 (23%)
Query: 119 FEPLTMIGKGAFGEV-RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD-- 175
+ L IG G +V +V EK +YA+K + L + + + RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 176 ---SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
S+ I++LY D+Y+Y++ME D+ + L +K ++ E + Y + A+ +
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
IH+H +H D+KP N L+ +G +KL DFG ++ +Q D
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFG--------------------IANQMQPDTT 209
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME-----------CDW 341
V S VG +Y+ PE + E D
Sbjct: 210 SVVKD-------------------SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250
Query: 342 WSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLC-- 398
WSLG I+Y M G PF +S I++ ++FP+ PE KDL L C
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD----IPE-KDLQDVLKCCL 305
Query: 399 --NVEQRLGTKGADEIKAHPWFK 419
+ +QR+ E+ AHP+ +
Sbjct: 306 KRDPKQRISIP---ELLAHPYVQ 325
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 140/339 (41%), Gaps = 82/339 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCRE-KATGHVYAMKKLK---KSEMLRRGQVEHVKAERNLLAEV 174
+E + IG+GA+G+V R+ K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 175 DSNCIVKLY--CSFQDDEY---LYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETV 227
N +V+L+ C+ + L L+ E++ D+ T L + + + E + + + +
Sbjct: 73 HPN-VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
++ +H H +HRD+KP N+L+ +G +KL+DFGL +
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR---------------------- 168
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+ +Q M S V T Y APEVLL+ Y D WS+G I
Sbjct: 169 ----------------IYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIV---------NWRTHLKFPEEAKLSPEA--------- 389
EM P F + KI+ +W + P +A S A
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 390 -----KDLISKLLC-NVEQRLGTKGADEIKAHPWFKGIE 422
KDL+ K L N +R+ A +HP+F+ +E
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSA---LSHPYFQDLE 304
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 101/241 (41%), Gaps = 57/241 (23%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
F+ L+ +G G++GEV R K G +YA+K+ S RG + + LAEV S+
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---SMSPFRGPKDRARK----LAEVGSH 110
Query: 178 -------CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
C V+L ++++ LYL E +L E + Y+ +T+LA+
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLAL 170
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+H +H D+KP N+ L G KL DFGL +G+ +G +Q
Sbjct: 171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL------------VELGTAGAGEVQE- 217
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
G P Y+APE LL+ YG D +SLG + E
Sbjct: 218 -----------------------------GDPRYMAPE-LLQGSYGTAADVFSLGLTILE 247
Query: 351 M 351
+
Sbjct: 248 V 248
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 168
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 169 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 212 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 259
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 260 HPWMQDV 266
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 183
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 184 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 227 DIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPXDRPTFEEIQN 274
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 275 HPWMQDV 281
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 167
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 168 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 211 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 258
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 259 HPWMQDV 265
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 111/269 (41%), Gaps = 54/269 (20%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---KSEMLRRGQVEHVKAERNL 170
M +EP+ IG GA+G V R+ +GH A+K ++ E L V V R L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 171 LAEVDSNCIVKLY----CSFQDDEY-LYLIMEYLPGGDMMTLLMRKDT--LTEEEARFYV 223
A N +V+L S D E + L+ E++ D+ T L + L E + +
Sbjct: 61 EAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ + ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------------------ 160
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
+ +Q M + V T Y APEVLL+ Y D WS
Sbjct: 161 --------------------IYSYQ----MALFPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVN 372
+G I EM P F + KI +
Sbjct: 197 VGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 62/321 (19%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
Q ++ ADD EP+ +G+GA+G V R +G + A+K++ R V + +R
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-------RATVNSQEQKRL 96
Query: 170 L------LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGG---DMMTLLMRKDTLTEEEAR 220
L + VD V Y + + +++ ME + ++ + T+ E+
Sbjct: 97 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILG 156
Query: 221 FYVGETVLAIESIH-KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
V A+E +H K + IHRD+KP N+L++ G +K+ DFG+ L
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL------------ 204
Query: 280 GSNLSGALQSDGRP-VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME 338
+++ + + +P +AP R I PE L +KGY ++
Sbjct: 205 VDSVAKTIDAGCKPYMAPER--------------------------INPE-LNQKGYSVK 237
Query: 339 CDWWSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL 397
D WSLG M E+ + P+ S P +++V + P + K S E D S+ L
Sbjct: 238 SDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-EPSPQLPAD-KFSAEFVDFTSQCL 295
Query: 398 CNVEQRLGTKGADEIKAHPWF 418
+ T E+ HP+F
Sbjct: 296 KKNSKERPT--YPELMQHPFF 314
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 182
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 183 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 226 DIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 273
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 274 HPWMQDV 280
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 112/265 (42%), Gaps = 66/265 (24%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
Q A+D + L IG+GA+G V K +G + A+K++ R V+ K ++
Sbjct: 15 QHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-------RSTVDE-KEQKQ 66
Query: 170 LLAEVD-----SNC--IVKLYCSFQDDEYLYLIMEYLPGGD----MMTLLMRKDTLTEEE 218
LL ++D S+C IV+ Y + + ++ ME + + D + EE
Sbjct: 67 LLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEI 126
Query: 219 ARFYVGETVLAIESIHKH-NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDF 277
TV A+ + ++ IHRDIKP N+LLDR+G++KL DFG+ L S + +D
Sbjct: 127 LGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD- 185
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL----LKK 333
G Y+APE + ++
Sbjct: 186 -----------------------------------------AGCRPYMAPERIDPSASRQ 204
Query: 334 GYGMECDWWSLGAIMYEMLVGYPPF 358
GY + D WSLG +YE+ G P+
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPY 229
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 143
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 178
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 179 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 220 AELLTGRTLF 229
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 168
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 169 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 212 DIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 259
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 260 HPWMQDV 266
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 195
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 196 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 239 DIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 286
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 287 HPWMQDV 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 195
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 196 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 239 DIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFEEIQN 286
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 287 HPWMQDV 293
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 183
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 184 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 227 DIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 274
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 275 HPWMQDV 281
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 210
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 211 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 254 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 301
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 302 HPWMQDV 308
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 168
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 169 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 212 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 259
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 260 HPWMQDV 266
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 196
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 197 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 240 DIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFEEIQN 287
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 288 HPWMQDV 294
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 196
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 197 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 240 DIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFEEIQN 287
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 288 HPWMQDV 294
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 182
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 183 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 226 DIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFEEIQN 273
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 274 HPWMQDV 280
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 195
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 196 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 239 DIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFEEIQN 286
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 287 HPWMQDV 293
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 163
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 164 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 207 DIPFEHDEEI--IRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFEEIQN 254
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 255 HPWMQDV 261
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 69
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L Q+K+F ++ G
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP----QDKEFF-------KVKEPG- 177
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
E W APE L + + + D WS G ++YE+
Sbjct: 178 ---------ESPIFW-----------------YAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 353 V 353
Sbjct: 212 T 212
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 196
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 197 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 240 DIPFEHDE------EIIGGQVFFR----QRVSXECQHLIR--WCLALRPSDRPTFEEIQN 287
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 288 HPWMQDV 294
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 183
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 184 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 227 DIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFEEIQN 274
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 275 HPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 210
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 211 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 254 DIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFEEIQN 301
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 302 HPWMQDV 308
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 195
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 196 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 239 DIPFEHDE------EIIGGQVFFR----QRVSXECQHLIR--WCLALRPSDRPTFEEIQN 286
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 287 HPWMQDV 293
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 196
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 197 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 240 DIPFEHDE------EIIGGQVFFR----QRVSXECQHLIR--WCLALRPSDRPTFEEIQN 287
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 288 HPWMQDV 294
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 101
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 102 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 156
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 191
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 192 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 232
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 233 AELLTGRTLF 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 166
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 167 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 210 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 257
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 258 HPWMQDV 264
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 102
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 103 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 157
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 192
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 193 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 234 AELLTGRTLF 243
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 133
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 169 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 210 AELLTGRTLF 219
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 163
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 164 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE + R V +R ++S E + LI C + +EI+
Sbjct: 207 DIPFEHDEEI--IRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 254
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 255 HPWMQDV 261
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 190
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 191 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 234 DIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFEEIQN 281
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 282 HPWMQDV 288
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 202
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 203 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 246 DIPFEHDE--EIIRGQVFFRQ--------RVSSECQHLIR--WCLALRPSDRPTFEEIQN 293
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 294 HPWMQDV 300
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 92
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 93 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 147
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 182
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 183 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 223
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 224 AELLTGRTLF 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 163
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 164 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE +I+ + + ++S E + LI C + +EI+
Sbjct: 207 DIPFEHDE------EIIGGQVFFR----QRVSSECQHLIR--WCLALRPSDRPTFEEIQN 254
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 255 HPWMQDV 261
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCAKLTDDHVQFLIYQILRG 133
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 169 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 210 AELLTGRTLF 219
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 65/307 (21%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NC 178
++G G FG V + A+K ++K + G++ + V E LL +V S +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 179 IVKLYCSFQDDEYLYLIMEYL-PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+++L F+ + LI+E P D+ + + L EE AR + + + A+ H
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 238 YIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+HRDIK +N+L+D N G +KL DFG SGAL D
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFG---------------------SGALLKD------ 215
Query: 297 RRTQQEQLQHWQRNRRMLAYSTV-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVG 354
Y+ GT Y PE + + +G WSLG ++Y+M+ G
Sbjct: 216 -----------------TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
Query: 355 YPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKA 414
PF DE R V +R ++S E + LI C + +EI+
Sbjct: 259 DIPFEHDE--EIIRGQVFFRQ--------RVSXECQHLIR--WCLALRPSDRPTFEEIQN 306
Query: 415 HPWFKGI 421
HPW + +
Sbjct: 307 HPWMQDV 313
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 49/249 (19%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
+ F+ L +G G + V K TG A+K++K G E +L+ E+
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELK 61
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGG-----DMMTLLMRKDTLTEEEARFYVGETVLAI 230
IV+LY + L L+ E++ D T+ L +++ + + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
H++ +HRD+KP NLL+++ G +KL DFGL +
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF----------------------- 158
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMY 349
G PV E + W R AP+VL+ + Y D WS G I+
Sbjct: 159 GIPV--NTFSSEVVTLWYR----------------APDVLMGSRTYSTSIDIWSCGCILA 200
Query: 350 EMLVGYPPF 358
EM+ G P F
Sbjct: 201 EMITGKPLF 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL + D ++G
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMAGF--- 182
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
VA R W R APE++L Y D WS+G IM
Sbjct: 183 ----VATR---------WYR----------------APEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL + D ++G
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMAGF--- 182
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
VA R W R APE++L Y D WS+G IM
Sbjct: 183 ----VATR---------WYR----------------APEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL--AEVDSNCIVKL 182
IG+G F V + A V +K+ ++ + AE L A N +
Sbjct: 29 IGEGTFSSVYLA--TAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVK 86
Query: 183 YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
YC F+ ++++ + M YL + +L ++L+ +E R Y+ A++ IH+ +HRD
Sbjct: 87 YC-FRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRD 142
Query: 243 IKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
+KP N L +R L DFGL + + ++ F +QS+ + R Q
Sbjct: 143 VKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF---------VQSEAQ---QERCSQ 190
Query: 302 EQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYPPFY- 359
+ R+ +A GTP + APEVL K D WS G I +L G PFY
Sbjct: 191 NKCSICLSRRQQVA-PRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249
Query: 360 SDEPMSTCRKIVNWR 374
+ + ++ +I+ R
Sbjct: 250 ASDDLTALAQIMTIR 264
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 138/336 (41%), Gaps = 82/336 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCRE-KATGHVYAMKKLK---KSEMLRRGQVEHVKAERNLLAEV 174
+E + IG+GA+G+V R+ K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 175 DSNCIVKLY--CSFQDDEY---LYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETV 227
N +V+L+ C+ + L L+ E++ D+ T L + + + E + + + +
Sbjct: 73 HPN-VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
++ +H H +HRD+KP N+L+ +G +KL+DFGL +
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR---------------------- 168
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+ +Q M S V T Y APEVLL+ Y D WS+G I
Sbjct: 169 ----------------IYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 348 MYEMLVGYPPFYSDEPMSTCRKIV---------NWRTHLKFPEEAKLSPEA--------- 389
EM P F + KI+ +W + P +A S A
Sbjct: 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 268
Query: 390 -----KDLISKLLC-NVEQRLGTKGADEIKAHPWFK 419
KDL+ K L N +R+ A +HP+F+
Sbjct: 269 IDELGKDLLLKCLTFNPAKRISAYSA---LSHPYFQ 301
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 102
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 103 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 157
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 192
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E V T Y APE++L Y D WS+G IM
Sbjct: 193 -------RHTDDEM------------XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 234 AELLTGRTLF 243
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 133
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL + D ++G
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMAGF--- 178
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
VA R W R APE++L Y D WS+G IM
Sbjct: 179 ----VATR---------WYR----------------APEIMLNWMHYNQTVDIWSVGCIM 209
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 210 AELLTGRTLF 219
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---KSEMLRRGQVEHVKAERNL 170
M +EP+ IG GA+G V R+ +GH A+K ++ E L V V R L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 171 LAEVDSNCIVKLY----CSFQDDEY-LYLIMEYLPGGDMMTLLMRKDT--LTEEEARFYV 223
A N +V+L S D E + L+ E++ D+ T L + L E + +
Sbjct: 61 EAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ + ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------------------ 160
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
+ +Q M V T Y APEVLL+ Y D WS
Sbjct: 161 --------------------IYSYQ----MALAPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVN 372
+G I EM P F + KI +
Sbjct: 197 VGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 72
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 183 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 353 V 353
Sbjct: 215 T 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 76
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 186
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 187 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 218
Query: 353 V 353
Sbjct: 219 T 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 74
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 184
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 185 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 216
Query: 353 V 353
Sbjct: 217 T 217
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 98/337 (29%)
Query: 123 TMIGKGAFGEVRVCREKATGHVYAMKKLKK---SEMLRRGQ------VEHVKAERNLLAE 173
T +G GA+G V +K +G A+KKL + SE+ + ++H++ E N++
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGL 88
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI 233
+D +F D YL+M ++ D+ ++ K +EE+ ++ V + + ++ I
Sbjct: 89 LDVFTPASSLRNFYD---FYLVMPFM-QTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYI 142
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H +HRD+KP NL ++ + +K+ DFGL + D + ++G +
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD------------AEMTGYV------ 184
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
+ W R APEV+L Y D WS+G IM EML
Sbjct: 185 ----------VTRWYR----------------APEVILSWMHYNQTVDIWSVGCIMAEML 218
Query: 353 VGYPPFYSDEPMSTCRKIVNW-----------------RTHLK-------------FPEE 382
G F + + +I+ +++++ FP
Sbjct: 219 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP-- 276
Query: 383 AKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWF 418
+ SP+A DL+ K+L +V++RL A + HP+F
Sbjct: 277 -RASPQAADLLEKMLELDVDKRL---TAAQALTHPFF 309
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 57/254 (22%)
Query: 112 HKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL 171
H A +E L +IGKG+FG+V + A+K ++ + R E ++ +L
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 172 AEVDSNC--IVKLYCSFQDDEYLYLIMEYLPGGDMMTL--LMRKD---TLTEEEARFYVG 224
+ N ++ + +F ++ + E L M L L++K+ + R +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGH--MKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ ++++HK+ IH D+KP+N+LL + G +K+ DFG C Q
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQR-------- 255
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
Y+ + + Y APEV+L YGM D W
Sbjct: 256 --------------------------------VYTXIQSRFYRAPEVILGARYGMPIDMW 283
Query: 343 SLGAIMYEMLVGYP 356
SLG I+ E+L GYP
Sbjct: 284 SLGCILAELLTGYP 297
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 139/340 (40%), Gaps = 95/340 (27%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA---ERNLLAEVD 175
++ L+ +G GA+G V + +G A+KKL + + H K E LL +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP----FQSIIHAKRTYRELRLLKHMK 108
Query: 176 SNCIVKLYCSFQ--------DDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETV 227
++ L F +D YL + +L G D+ ++ + LT++ +F + + +
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYL---VTHLMGADLNNIV-KCQKLTDDHVQFLIYQIL 164
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----------------------- 201
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGA 346
R T E M Y V T Y APE++L Y M D WS+G
Sbjct: 202 ---------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNMTVDIWSVGC 240
Query: 347 IMYEMLVGYPPFYSDEPMSTCRKIVNW-----------------RTHL-KFPEEAK---- 384
IM E+L G F + ++ ++I+ R ++ P+ K
Sbjct: 241 IMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFA 300
Query: 385 -----LSPEAKDLISKLLC-NVEQRLGTKGADEIKAHPWF 418
+P A DL+ K+L + ++R+ A E AHP+F
Sbjct: 301 DVFIGANPLAVDLLEKMLVLDTDKRI---TASEALAHPYF 337
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 68
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 178
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 179 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 210
Query: 353 V 353
Sbjct: 211 T 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 100
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 210
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 211 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 242
Query: 353 V 353
Sbjct: 243 T 243
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 67
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 177
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 178 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 209
Query: 353 V 353
Sbjct: 210 T 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 69
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 179
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 180 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 353 V 353
Sbjct: 212 T 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 75
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 185
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 186 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 217
Query: 353 V 353
Sbjct: 218 T 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 73
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 183
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 184 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 215
Query: 353 V 353
Sbjct: 216 T 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 69
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 179
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 180 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 211
Query: 353 V 353
Sbjct: 212 T 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---KSEMLRRGQVEHVKAERNL 170
M +EP+ IG GA+G V R+ +GH A+K ++ E L V V R L
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 171 LAEVDSNCIVKLY----CSFQDDEY-LYLIMEYLPGGDMMTLLMRKDT--LTEEEARFYV 223
A N +V+L S D E + L+ E++ D+ T L + L E + +
Sbjct: 61 EAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ + ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR------------------ 160
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
+ +Q M V T Y APEVLL+ Y D WS
Sbjct: 161 --------------------IYSYQ----MALDPVVVTLWYRAPEVLLQSTYATPVDMWS 196
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVN 372
+G I EM P F + KI +
Sbjct: 197 VGCIFAEMFRRKPLFCGNSEADQLGKIFD 225
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 57/254 (22%)
Query: 112 HKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL 171
H A +E L +IGKG+FG+V + A+K ++ + R E ++ +L
Sbjct: 92 HDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 172 AEVDSNC--IVKLYCSFQDDEYLYLIMEYLPGGDMMTL--LMRKD---TLTEEEARFYVG 224
+ N ++ + +F ++ + E L M L L++K+ + R +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGH--MKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ ++++HK+ IH D+KP+N+LL + G +K+ DFG C Q
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQR-------- 255
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
Y+ + + Y APEV+L YGM D W
Sbjct: 256 --------------------------------VYTXIQSRFYRAPEVILGARYGMPIDMW 283
Query: 343 SLGAIMYEMLVGYP 356
SLG I+ E+L GYP
Sbjct: 284 SLGCILAELLTGYP 297
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 64/278 (23%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
+R + D F+ M G+G FG V++ +EK+TG A+KK+ + R +++ ++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD--- 72
Query: 170 LLAEVDSNCIVKLYCSF-------QDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEA--- 219
LA + IV+L F + D YL ++MEY+P D + R +
Sbjct: 73 -LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPI 129
Query: 220 --RFYVGETVLAIESIH--KHNYIHRDIKPDNLLLDR-NGHMKLSDFGLCKPLDCSNLQE 274
+ ++ + + +I +H N HRDIKP N+L++ +G +KL DFG K L
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS------ 183
Query: 275 KDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KK 333
P P +AY + + Y APE++ +
Sbjct: 184 ------------------PSEPN----------------VAY--ICSRYYRAPELIFGNQ 207
Query: 334 GYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIV 371
Y D WS+G I EM++G P F D +IV
Sbjct: 208 HYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKXQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 60/245 (24%)
Query: 122 LTMIGKGAFGEVRVCREKA----TGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 71
Query: 178 CIVKLYCSFQDDEY------LYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAI 230
IVK ++ Y L L+MEYLP G + L R + L Y + +
Sbjct: 72 FIVK----YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK--PLDCSNLQEKDFSIGSNLSGALQ 288
E + +HRD+ N+L++ H+K++DFGL K PLD KD+ +
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDYYV--------- 172
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
R + W APE L + + D WS G ++
Sbjct: 173 --------VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVL 207
Query: 349 YEMLV 353
YE+
Sbjct: 208 YELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 87
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 197
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 198 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 353 V 353
Sbjct: 230 T 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 135/316 (42%), Gaps = 64/316 (20%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL---- 171
ADD EP+ +G+GA+G V R +G + A+K++ R V + +R L+
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI-------RATVNSQEQKRLLMDLDI 58
Query: 172 --AEVDSNCIVKLYCSFQDDEYLYLIMEYLPGG---DMMTLLMRKDTLTEEEARFYVGET 226
VD V Y + + +++ ME + ++ + T+ E+
Sbjct: 59 SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 227 VLAIESIH-KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSG 285
V A+E +H K + IHRD+KP N+L++ G +K+ DFG+ L + KD G
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDIDAGC---- 172
Query: 286 ALQSDGRP-VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
+P +AP R I PE L +KGY ++ D WSL
Sbjct: 173 ------KPYMAPER--------------------------INPE-LNQKGYSVKSDIWSL 199
Query: 345 GAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQ 402
G M E+ + P+ S P +++V + P + K S E D S+ L N ++
Sbjct: 200 GITMIELAILRFPYDSWGTPFQQLKQVVE-EPSPQLPAD-KFSAEFVDFTSQCLKKNSKE 257
Query: 403 RLGTKGADEIKAHPWF 418
R E+ HP+F
Sbjct: 258 R---PTYPELMQHPFF 270
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 87
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 197
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 198 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 229
Query: 353 V 353
Sbjct: 230 T 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 60/245 (24%)
Query: 122 LTMIGKGAFGEVRVCREKA----TGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 84
Query: 178 CIVKLYCSFQDDEY------LYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAI 230
IVK ++ Y L L+MEYLP G + L R + L Y + +
Sbjct: 85 FIVK----YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK--PLDCSNLQEKDFSIGSNLSGALQ 288
E + +HRD+ N+L++ H+K++DFGL K PLD KD+ +
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDYYV--------- 185
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
R + W APE L + + D WS G ++
Sbjct: 186 --------VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVL 220
Query: 349 YEMLV 353
YE+
Sbjct: 221 YELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 60/245 (24%)
Query: 122 LTMIGKGAFGEVRVCREKA----TGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 72
Query: 178 CIVKLYCSFQDDEY------LYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAI 230
IVK ++ Y L L+MEYLP G + L R + L Y + +
Sbjct: 73 FIVK----YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 128
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK--PLDCSNLQEKDFSIGSNLSGALQ 288
E + +HRD+ N+L++ H+K++DFGL K PLD KD+ +
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDYYV--------- 173
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
R + W APE L + + D WS G ++
Sbjct: 174 --------VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVL 208
Query: 349 YEMLV 353
YE+
Sbjct: 209 YELFT 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 70
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIMEYLP G + L + K+ + + Y + +E
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHR++ N+L++ +K+ DFGL K L Q+K++ ++ G
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLP----QDKEYY-------KVKEPG- 178
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
E W APE L + + + D WS G ++YE+
Sbjct: 179 ---------ESPIFW-----------------YAPESLTESKFSVASDVWSFGVVLYELF 212
Query: 353 V 353
Sbjct: 213 T 213
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KXQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ IG GA+G V + TG A+KKL K ++H+K E N
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 142
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------------------------- 177
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 178 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 219 AELLTGRTLF 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 139
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA------------------------- 174
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 175 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 216 AELLTGRTLF 225
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 143
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA------------------------- 178
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 179 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 220 AELLTGRTLF 229
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK--SEMLRRGQ-------VEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++ + ++H+K E N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE-N 94
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 95 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 149
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 184
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 185 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 225
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 226 AELLTGRTLF 235
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 113
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 205
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 206 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 250 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 308
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 309 TPPEAIALCSRLL 321
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TGH A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DF L
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 59/291 (20%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + G A
Sbjct: 1 MSKSKVDNQFYSVEVADSTFTVLKR-------YQQLKPIGSGAQGIVCAAFDTVLGINVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYL------YLIMEYLP 200
+KKL + + + E LL V+ I+ L F + L YL+ME +
Sbjct: 54 VKKLSRP-FQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD 112
Query: 201 GGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSD 260
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+ D
Sbjct: 113 ANLCQVIHMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 169
Query: 261 FGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVG 320
FGL + C+N + V
Sbjct: 170 FGLART-ACTNFMMTPY-----------------------------------------VV 187
Query: 321 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIV 371
T Y APEV+L GY D WS+G IM E++ G F + + K++
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVI 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 52/241 (21%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 72
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIES 232
+ IVK C L LIME+LP G + L + K+ + + Y + +E
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---------- 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
P+ + APE L + + + D WS G ++YE+
Sbjct: 183 PIF----------------------------WYAPESLTESKFSVASDVWSFGVVLYELF 214
Query: 353 V 353
Sbjct: 215 T 215
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 98/338 (28%)
Query: 123 TMIGKGAFGEVRVCREKATGHVYAMKKLKK---SEMLRRGQ------VEHVKAERNLLAE 173
T +G GA+G V +K +G A+KKL + SE+ + ++H++ E N++
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGL 106
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI 233
+D +F D YL+M ++ D+ ++ + +EE+ ++ V + + ++ I
Sbjct: 107 LDVFTPASSLRNFYD---FYLVMPFM-QTDLQKIMGME--FSEEKIQYLVYQMLKGLKYI 160
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
H +HRD+KP NL ++ + +K+ DFGL + D + ++G +
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD------------AEMTGYV------ 202
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEML 352
+ W R APEV+L Y D WS+G IM EML
Sbjct: 203 ----------VTRWYR----------------APEVILSWMHYNQTVDIWSVGCIMAEML 236
Query: 353 VGYPPFYSDEPMSTCRKIVNW-----------------RTHLK-------------FPEE 382
G F + + +I+ +++++ FP
Sbjct: 237 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFP-- 294
Query: 383 AKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWFK 419
+ SP+A DL+ K+L +V++RL A + HP+F+
Sbjct: 295 -RASPQAADLLEKMLELDVDKRL---TAAQALTHPFFE 328
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 142
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------------------------- 177
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 178 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 219 AELLTGRTLF 228
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 125/324 (38%), Gaps = 72/324 (22%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVK 181
L +G+G + V + K T ++ A+K+++ G E +LL ++ IV
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVT 64
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHR 241
L+ ++ L L+ EYL L + + + ++ + + + H+ +HR
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQ 301
D+KP NLL++ G +KL+DFGL + + + +
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR-------------------------AKSIPTKTYDN 159
Query: 302 EQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEMLVGYPPF-- 358
E + W R P++LL Y + D W +G I YEM G P F
Sbjct: 160 EVVTLWYR----------------PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203
Query: 359 -YSDEPMSTCRKIVNWRTHLKFP-----EEAK------------------LSPEAKDLIS 394
+E + +I+ T +P EE K L + DL++
Sbjct: 204 STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLT 263
Query: 395 KLLCNVEQRLGTKGADEIKAHPWF 418
KLL E R D +K HP+F
Sbjct: 264 KLL-QFEGRNRISAEDAMK-HPFF 285
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 57/254 (22%)
Query: 112 HKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL 171
H A +E L +IGKG FG+V + A+K ++ + R E ++ +L
Sbjct: 92 HDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR 151
Query: 172 AEVDSNC--IVKLYCSFQDDEYLYLIMEYLPGGDMMTL--LMRKD---TLTEEEARFYVG 224
+ N ++ + +F ++ + E L M L L++K+ + R +
Sbjct: 152 KQDKDNTMNVIHMLENFTFRNHICMTFELLS----MNLYELIKKNKFQGFSLPLVRKFAH 207
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGH--MKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ ++++HK+ IH D+KP+N+LL + G +K+ DFG C Q
Sbjct: 208 SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQR-------- 255
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
Y + + Y APEV+L YGM D W
Sbjct: 256 --------------------------------VYXXIQSRFYRAPEVILGARYGMPIDMW 283
Query: 343 SLGAIMYEMLVGYP 356
SLG I+ E+L GYP
Sbjct: 284 SLGCILAELLTGYP 297
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 105
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 106 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 160
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 195
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 196 -------RHTDDE----------MXGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 237 AELLTGRTLF 246
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 105/258 (40%), Gaps = 57/258 (22%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK------KSEMLRRGQVEHVKAE 167
M +EP+ IG GA+G V R+ +GH A+K ++ L V V
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 168 RNLLAEVDSNCIVKLY----CSFQDDEY-LYLIMEYLPGGDMMTLLMRKDT--LTEEEAR 220
R L A N +V+L S D E + L+ E++ D+ T L + L E +
Sbjct: 66 RRLEAFEHPN-VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 221 FYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
+ + + ++ +H + +HRD+KP+N+L+ G +KL+DFGL +
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR--------------- 168
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
+ +Q M V T Y APEVLL+ Y D
Sbjct: 169 -----------------------IYSYQ----MALTPVVVTLWYRAPEVLLQSTYATPVD 201
Query: 341 WWSLGAIMYEMLVGYPPF 358
WS+G I EM P F
Sbjct: 202 MWSVGCIFAEMFRRKPLF 219
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK-GYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNAMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 93
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 94 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 148
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA------------------------- 183
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 184 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 224
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 225 AELLTGRTLF 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 139
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 174
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 175 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 216 AELLTGRTLF 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 107
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 199
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 200 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 243
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 244 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 302
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 303 TPPEAIALCSRLL 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 144
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 179
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 180 -------RHTADE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 221 AELLTGRTLF 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 142
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 177
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 178 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 219 AELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 81
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 82 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 136
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 171
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 172 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 212
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 213 AELLTGRTLF 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 143
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 178
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 179 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 220 AELLTGRTLF 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 144
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 179
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 180 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 221 AELLTGRTLF 230
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 139
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 174
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 175 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 216 AELLTGRTLF 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 117
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 209
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 210 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 253
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 254 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 312
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 313 TPPEAIALCSRLL 325
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 93
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 94 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 148
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 183
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 184 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 224
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 225 AELLTGRTLF 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 144
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 179
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 180 -------RHTADE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 221 AELLTGRTLF 230
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 113
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 205
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 206 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 250 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 308
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 309 TPPEAIALCSRLL 321
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 144
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 179
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 180 -------RHTADE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 221 AELLTGRTLF 230
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 94
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 95 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 149
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 184
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 185 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 225
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 226 AELLTGRTLF 235
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 94
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 95 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 149
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 184
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 185 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 225
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 226 AELLTGRTLF 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 139
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 174
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 175 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 216 AELLTGRTLF 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 115
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 207
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 208 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 251
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 252 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 310
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 311 TPPEAIALCSRLL 323
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 126/309 (40%), Gaps = 79/309 (25%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPA--TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
+L+G P F D + +I+ L ++ I ++ N +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREMNPNYTEF----AFP 260
Query: 411 EIKAHPWFK 419
+IKAHPW K
Sbjct: 261 QIKAHPWTK 269
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 91
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 183
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 184 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 228 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 286
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 287 TPPEAIALCSRLL 299
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 143
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 178
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 179 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 220 AELLTGRTLF 229
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 91
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 183
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 184 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 228 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 286
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 287 TPPEAIALCSRLL 299
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 87
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 179
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 180 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 223
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 224 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 282
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 283 TPPEAIALCSRLL 295
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 101
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 102 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 156
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 191
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 192 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 232
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 233 AELLTGRTLF 242
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 98
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 190
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 191 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 234
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 235 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 293
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 294 TPPEAIALCSRLL 306
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 99/245 (40%), Gaps = 60/245 (24%)
Query: 122 LTMIGKGAFGEVRVCREKA----TGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
++ +GKG FG V +CR TG + A+K+L+ S Q + E +L + S+
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSD 68
Query: 178 CIVKLYCSFQDDEY------LYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAI 230
IVK ++ Y L L+MEYLP G + L R + L Y + +
Sbjct: 69 FIVK----YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK--PLDCSNLQEKDFSIGSNLSGALQ 288
E + +HRD+ N+L++ H+K++DFGL K PLD KD +
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD------KDXXV--------- 169
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
R + W APE L + + D WS G ++
Sbjct: 170 --------VREPGQSPIFW-----------------YAPESLSDNIFSRQSDVWSFGVVL 204
Query: 349 YEMLV 353
YE+
Sbjct: 205 YELFT 209
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 102
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 103 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 157
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 192
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 193 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 234 AELLTGRTLF 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 142
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 177
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 178 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 219 AELLTGRTLF 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 79
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 80 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 134
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 169
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 170 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 210
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 211 AELLTGRTLF 220
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 28/245 (11%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKK-LKKSEMLRRGQVEHVKAERNLLAEVD 175
D +E +IG G++G V +K V A+KK L+ E L + + E +L ++
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL--IDCKRILREIAILNRLN 110
Query: 176 SNCIVKLYC-----SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
+ +VK+ + + LY+++E + D L LTE + + ++ +
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+ +H +HRD+KP N L++++ +K+ DFGL + +D N + L
Sbjct: 170 KYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP----------ENGNSQL--- 216
Query: 291 GRPVAPRRTQQE--QLQHWQRNRRMLAYSTVGTPDYIAPE-VLLKKGYGMECDWWSLGAI 347
P++PR H + +R L V T Y APE +LL++ Y D WS+G I
Sbjct: 217 --PISPREDDMNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILLQENYTEAIDVWSIGCI 273
Query: 348 MYEML 352
E+L
Sbjct: 274 FAELL 278
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 79
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 80 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 134
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 169
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 170 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 210
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 211 AELLTGRTLF 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 158
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 250
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 251 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 294
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 295 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 353
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 354 TPPEAIALCSRLL 366
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 84
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 176
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 177 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 220
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 221 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 279
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 280 TPPEAIALCSRLL 292
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 80
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 81 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 135
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 170
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 171 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 211
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 212 AELLTGRTLF 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 105
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 106 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 160
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 195
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 196 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 237 AELLTGRTLF 246
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 79/309 (25%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGAD 410
+L+G P F D + +I+ L ++ I ++ N +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKV-----------LGTPTREQIREMNPNYTEF----AFP 260
Query: 411 EIKAHPWFK 419
+IKAHPW K
Sbjct: 261 QIKAHPWTK 269
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 133
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA------------------------- 168
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 169 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 210 AELLTGRTLF 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ + ++ LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNI-VKCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ DFGL + D ++G
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------------DEMTGX--- 182
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
VA R W R APE++L Y D WS+G IM
Sbjct: 183 ----VATR---------WYR----------------APEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI---- 103
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+ N I++ + + + +YL+ +L G D+ LL + L+ + +++ + +
Sbjct: 104 -----IGINDIIRA-PTIEQMKDVYLV-THLMGADLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD-------------------- 195
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 196 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 237
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 238 LAEMLSNRPIF 248
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 274
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 275 TPPEAIALCSRLL 287
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 65/270 (24%)
Query: 103 ETEYMRLQRHKMGADDFEPLTMIGKGAFGEV----------RVCREKATG---HVYAMKK 149
E E ++ Q +G + L IG+GA+G V RV +K + Y +
Sbjct: 30 EVEMVKGQPFDVGPR-YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 150 LKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM 209
L++ ++L R + E+V R++L + +Y I++ L D+ LL
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVY-----------IVQDLMETDLYKLL- 136
Query: 210 RKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDC 269
+ L+ + +++ + + ++ IH N +HRD+KP NLL++ +K+ DFGL + D
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIAD- 195
Query: 270 SNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEV 329
E D +G L VA R W R APE+
Sbjct: 196 ---PEHDH------TGFLTEX---VATR---------WYR----------------APEI 218
Query: 330 LL-KKGYGMECDWWSLGAIMYEMLVGYPPF 358
+L KGY D WS+G I+ EML P F
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 80
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 172
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 173 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 216
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 217 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 275
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 276 TPPEAIALCSRLL 288
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 274
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 275 TPPEAIALCSRLL 287
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 96/247 (38%), Gaps = 64/247 (25%)
Query: 122 LTMIGKGAFGEVRVCR----EKATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVD 175
L +GKG FG V +CR + TG V A+KKL+ S E LR + E +L +
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-----DFEREIEILKSLQ 72
Query: 176 SNCIVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF-------YVGET 226
+ IVK C L LIMEYLP G + +D L R Y +
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL------RDYLQAHAERIDHIKLLQYTSQI 126
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+E + YIHRD+ N+L++ +K+ DFGL K L K G +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES---- 182
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
P+ + APE L + + + D WS G
Sbjct: 183 ------PIF----------------------------WYAPESLTESKFSVASDVWSFGV 208
Query: 347 IMYEMLV 353
++YE+
Sbjct: 209 VLYELFT 215
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 92
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 184
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 185 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 228
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 229 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 287
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 288 TPPEAIALCSRLL 300
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 274
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 275 TPPEAIALCSRLL 287
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 83
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 175
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 176 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 219
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 220 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 278
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 279 TPPEAIALCSRLL 291
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D+ YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 274
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 275 TPPEAIALCSRLL 287
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 57/252 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+E L IG+G FGEV R + TG A+KK+ E + G E +L +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHEN 78
Query: 179 IVKLY--CSFQDDEY------LYLIMEY----LPGGDMMTLLMRKDTLTEEEARFYVGET 226
+V L C + Y +YL+ ++ L G +++ ++ K TL+E + V +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKR---VMQM 133
Query: 227 VL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSG 285
+L + IH++ +HRD+K N+L+ R+G +KL+DFGL + FS+ N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN--- 180
Query: 286 ALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 344
P R + W R PE+LL ++ YG D W
Sbjct: 181 --------SQPNRYXNRVVTLWYR----------------PPELLLGERDYGPPIDLWGA 216
Query: 345 GAIMYEMLVGYP 356
G IM EM P
Sbjct: 217 GCIMAEMWTRSP 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ D+GL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 65/285 (22%)
Query: 146 AMKKLKKSEMLRRGQVEH---VKAERNLLAEVDS--NCIVKLYCSFQDDEYLYLIMEYL- 199
A+K ++K + G++ + V E LL +V S + +++L F+ + LI+E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN-GHMKL 258
P D+ + + L EE AR + + + A+ H +HRDIK +N+L+D N G +KL
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFG SGAL D Y+
Sbjct: 200 IDFG---------------------SGALLKDT-----------------------VYTD 215
Query: 319 V-GTPDYIAPE-VLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTH 376
GT Y PE + + +G WSLG ++Y+M+ G PF DE R V +R
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIRGQVFFRQ- 272
Query: 377 LKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGI 421
++S E + LI C + +EI+ HPW + +
Sbjct: 273 -------RVSSECQHLIR--WCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 57/252 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKK-LKKSE-------MLRRGQVEHVKAERNL 170
+E L IG+G FGEV R + TG A+KK L ++E LR ++ + N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEY----LPGGDMMTLLMRKDTLTEEEARFYVGET 226
+ ++ C K + +YL+ ++ L G +++ ++ K TL+E + V +
Sbjct: 80 VNLIEI-CRTKASPYNRCKASIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKR---VMQM 133
Query: 227 VL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSG 285
+L + IH++ +HRD+K N+L+ R+G +KL+DFGL + FS+ N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN--- 180
Query: 286 ALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 344
P R + W R PE+LL ++ YG D W
Sbjct: 181 --------SQPNRYXNRVVTLWYR----------------PPELLLGERDYGPPIDLWGA 216
Query: 345 GAIMYEMLVGYP 356
G IM EM P
Sbjct: 217 GCIMAEMWTRSP 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 126/313 (40%), Gaps = 91/313 (29%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+IG G+FG V + +G + A+KK+ + + + +++ ++ ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ-------IMRKLDHCNIVRLR 79
Query: 184 CSF------QDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIES 232
F +D YL L+++Y+P + + + R K TL + Y+ + ++
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 233 IHKHNYIHRDIKPDNLLLDRN-GHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
IH HRDIKP NLLLD + +KL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
QL + N S + + Y APE++ Y D WS G ++ E
Sbjct: 172 -----------QLVRGEPN-----VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 351 MLVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAK 384
+L+G P F D + +I+ N+ T KFP+ +
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY-TEFKFPQIKAHPWTKVFRPR 274
Query: 385 LSPEAKDLISKLL 397
PEA L S+LL
Sbjct: 275 TPPEAIALCSRLL 287
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 57/252 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+E L IG+G FGEV R + TG A+KK+ E + G E +L +
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHEN 77
Query: 179 IVKLY--CSFQDDEY------LYLIMEY----LPGGDMMTLLMRKDTLTEEEARFYVGET 226
+V L C + Y +YL+ ++ L G +++ ++ K TL+E + V +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKR---VMQM 132
Query: 227 VL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSG 285
+L + IH++ +HRD+K N+L+ R+G +KL+DFGL + FS+ N
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN--- 179
Query: 286 ALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 344
P R + W R PE+LL ++ YG D W
Sbjct: 180 --------SQPNRYXNRVVTLWYR----------------PPELLLGERDYGPPIDLWGA 215
Query: 345 GAIMYEMLVGYP 356
G IM EM P
Sbjct: 216 GCIMAEMWTRSP 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 57/252 (22%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+E L IG+G FGEV R + TG A+KK+ E + G E +L +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLLKHEN 78
Query: 179 IVKLY--CSFQDDEY------LYLIMEY----LPGGDMMTLLMRKDTLTEEEARFYVGET 226
+V L C + Y +YL+ ++ L G +++ ++ K TL+E + V +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKR---VMQM 133
Query: 227 VL-AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSG 285
+L + IH++ +HRD+K N+L+ R+G +KL+DFGL + FS+ N
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA----------FSLAKN--- 180
Query: 286 ALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSL 344
P R + W R PE+LL ++ YG D W
Sbjct: 181 --------SQPNRYXNRVVTLWYR----------------PPELLLGERDYGPPIDLWGA 216
Query: 345 GAIMYEMLVGYP 356
G IM EM P
Sbjct: 217 GCIMAEMWTRSP 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ FGL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 49/260 (18%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
D + +T +G+G +GEV + T A+K+++ E G E +LL E+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL-EHEEEGVPGTAIREVSLLKELQH 92
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I++L + L+LI EY D+ + + ++ + ++ + + + H
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 237 NYIHRDIKPDNLLLDRNGH-----MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+HRD+KP NLLL + +K+ DFGL + G
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-----------------------G 188
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYE 350
P+ R+ E + W R PE+LL + Y D WS+ I E
Sbjct: 189 IPI--RQFTHEIITLWYR----------------PPEILLGSRHYSTSVDIWSIACIWAE 230
Query: 351 MLVGYPPFYSDEPMSTCRKI 370
ML+ P F D + KI
Sbjct: 231 MLMKTPLFPGDSEIDQLFKI 250
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 135/329 (41%), Gaps = 78/329 (23%)
Query: 110 QRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERN 169
+ ++ ADD EP+ +G+GA+G V R +G + A+K+++ + + + ++
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT--------VNSQEQKR 78
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFY------- 222
LL ++D + + C F Y L E GD+ DT + +FY
Sbjct: 79 LLXDLDIS-XRTVDCPFTVTFYGALFRE----GDVWICXELXDTSLD---KFYKQVIDKG 130
Query: 223 --VGETVL---------AIESIH-KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCS 270
+ E +L A+E +H K + IHRD+KP N+L++ G +K DFG+ L
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--V 188
Query: 271 NLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL 330
+ KD G A P+ I PE L
Sbjct: 189 DDVAKDIDAGCKPYXA-----------------------------------PERINPE-L 212
Query: 331 LKKGYGMECDWWSLGAIMYEMLVGYPPFYS-DEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
+KGY ++ D WSLG E+ + P+ S P +++V + P + K S E
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE-EPSPQLPAD-KFSAEF 270
Query: 390 KDLISKLLCNVEQRLGTKGADEIKAHPWF 418
D S+ L + T E+ HP+F
Sbjct: 271 VDFTSQCLKKNSKERPT--YPELXQHPFF 297
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 63/293 (21%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVVAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNL--LAEVDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L + V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + ++ I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLSQVIQMELD---HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIV 371
V T Y APEV+L GY D WS+G IM EM+ G F + + K++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ D GL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ D GL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 87/283 (30%)
Query: 103 ETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE 162
ET+Y +R M DF+ + +IG G FG+V + + G Y ++RR +
Sbjct: 1 ETKYTVDKRFGM---DFKEIELIGSGGFGQVFKAKHRIDGKTY---------VIRRVKYN 48
Query: 163 HVKAERNL--LAEVDSNCIVKLY-C-------------SFQDDEY--------------- 191
+ KAER + LA++D IV C S + +Y
Sbjct: 49 NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKC 108
Query: 192 LYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLL 249
L++ ME+ G + + R + L + A + ++ IH IHRD+KP N+
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 250 LDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQR 309
L +K+ DFGL +L++DG+ RT+ +
Sbjct: 169 LVDTKQVKIGDFGLVT--------------------SLKNDGK-----RTRSK------- 196
Query: 310 NRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
GT Y++PE + + YG E D ++LG I+ E+L
Sbjct: 197 ----------GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK---------KSEMLRRGQVEHVKAERN 169
++ L+ +G GA+G V + TG A+KKL K ++H+K E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 170 LLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA 229
++ +D + F D +YL+ +L G D+ ++ + LT++ +F + + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCQKLTDDHVQFLIYQILRG 137
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ IH + IHRD+KP NL ++ + +K+ D GL
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA------------------------- 172
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIM 348
R T E M Y V T Y APE++L Y D WS+G IM
Sbjct: 173 -------RHTDDE----------MTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 349 YEMLVGYPPF 358
E+L G F
Sbjct: 214 AELLTGRTLF 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 59/291 (20%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYL------YLIMEYLP 200
+KKL + + + E L+ V+ I+ L F + L Y++ME +
Sbjct: 54 IKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 201 GGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSD 260
+ M D E + + + ++ I+ +H IHRD+KP N+++ + +K+ D
Sbjct: 113 ANLSQVIQMELD---HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILD 169
Query: 261 FGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVG 320
FGL + S + M Y V
Sbjct: 170 FGLARTAGTSFM----------------------------------------MTPY--VV 187
Query: 321 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIV 371
T Y APEV+L GY D WS+G IM EM+ G F + + K++
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD-------------------- 175
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD-------------------- 175
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 52/259 (20%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
++ L IG GA G V + G A+KKL + + + E LL V+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKN 82
Query: 179 IVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIES 232
I+ L F + L YL+ME + + M D E + + + + I+
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD---HERMSYLLYQMLCGIKH 139
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+H IHRD+KP N+++ + +K+ DFGL +
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST----------------------- 176
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
N M Y V T Y APEV+L GY D WS+G IM E++
Sbjct: 177 -----------------NFMMTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
Query: 353 VGYPPFYSDEPMSTCRKIV 371
G F + + K++
Sbjct: 218 KGSVIFQGTDHIDQWNKVI 236
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD-------------------- 175
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 114/291 (39%), Gaps = 59/291 (20%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYL------YLIMEYLP 200
+KKL + + + E L+ V+ I+ L F + L Y++ME +
Sbjct: 54 IKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 201 GGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSD 260
+ M D E + + + ++ I+ +H IHRD+KP N+++ + +K+ D
Sbjct: 113 ANLSQVIQMELD---HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILD 169
Query: 261 FGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVG 320
FGL + S + M Y V
Sbjct: 170 FGLARTAGTSFM----------------------------------------MTPY--VV 187
Query: 321 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIV 371
T Y APEV+L GY D WS+G IM EM+ G F + + K++
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD-------------------- 179
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 180 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D + + +G L
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH----------DHTGFLX 189
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
VA R W R APE++L KGY D WS+G I
Sbjct: 190 EX---VATR---------WYR----------------APEIMLNSKGYTKSIDIWSVGCI 221
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 93 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 140
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D + + +G L
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH----------DHTGFLX 190
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
VA R W R APE++L KGY D WS+G I
Sbjct: 191 EX---VATR---------WYR----------------APEIMLNSKGYTKSIDIWSVGCI 222
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 223 LAEMLSNRPIF 233
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 175
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 90 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 137
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 177
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 178 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 219
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 220 LAEMLSNRPIF 230
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 58/250 (23%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKL-- 182
+G G FG V + TG A+K+ ++ L E E ++ +++ +V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 183 ----YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT---LTEEEARFYVGETVLAIESIHK 235
++ L MEY GGD+ L + + L E R + + A+ +H+
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 236 HNYIHRDIKPDNLLL----DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ IHRD+KP+N++L R H K+ D G K LD
Sbjct: 141 NRIIHRDLKPENIVLQPGPQRLIH-KIIDLGYAKELD----------------------- 176
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
Q E L VGT Y+APE+L +K Y + D+WS G + +E
Sbjct: 177 --------QGE-----------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 217
Query: 352 LVGYPPFYSD 361
+ G+ PF +
Sbjct: 218 ITGFRPFLPN 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 101/250 (40%), Gaps = 58/250 (23%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKL-- 182
+G G FG V + TG A+K+ ++ L E E ++ +++ +V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 183 ----YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT---LTEEEARFYVGETVLAIESIHK 235
++ L MEY GGD+ L + + L E R + + A+ +H+
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 236 HNYIHRDIKPDNLLL----DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ IHRD+KP+N++L R H K+ D G K LD
Sbjct: 140 NRIIHRDLKPENIVLQPGPQRLIH-KIIDLGYAKELD----------------------- 175
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
Q E L VGT Y+APE+L +K Y + D+WS G + +E
Sbjct: 176 --------QGE-----------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFEC 216
Query: 352 LVGYPPFYSD 361
+ G+ PF +
Sbjct: 217 ITGFRPFLPN 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 93 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 140
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 180
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 181 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 222
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 223 LAEMLSNRPIF 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 86 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 133
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 173
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 174 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 215
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 216 LAEMLSNRPIF 226
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 94 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 141
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 181
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 182 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 223
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 224 LAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 85 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 132
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 172
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 173 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 214
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 215 LAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 179
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 180 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 96 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 143
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 183
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 184 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 225
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 226 LAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 88 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 135
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 175
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 176 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 217
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 218 LAEMLSNRPIF 228
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 60/257 (23%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEM----LRRGQVE-----HVKAERNLLAEVD 175
+G GA+G V + A+KKL + RR E H+K E N++ +D
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE-NVIGLLD 94
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
+ S +D +YL+ L G D+ ++ + L++E +F V + + ++ IH
Sbjct: 95 ---VFTPATSIEDFSEVYLVTT-LMGADLNNIV-KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
IHRD+KP N+ ++ + +++ DFGL +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR------------------------------ 179
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVG 354
Q + M Y V T Y APE++L Y D WS+G IM E+L G
Sbjct: 180 ------------QADEEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 355 YPPFYSDEPMSTCRKIV 371
F + + ++I+
Sbjct: 226 KALFPGSDYIDQLKRIM 242
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 86 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 133
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 173
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 174 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 215
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 216 LAEMLSNRPIF 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD-------------------- 179
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 180 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 108 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 155
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 195
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 196 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 237
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 238 LAEMLSNRPIF 248
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 105/255 (41%), Gaps = 71/255 (27%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL--LAEVD 175
DF+ + +IG G FG+V + + G Y +K++K + KAER + LA++D
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVK---------YNNEKAEREVKALAKLD 62
Query: 176 SNCIVKLYCSFQDDEY----------------LYLIMEYLPGGDMMTLL--MRKDTLTEE 217
IV + +Y L++ ME+ G + + R + L +
Sbjct: 63 HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 218 EARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDF 277
A + ++ IH I+RD+KP N+ L +K+ DFGL
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT------------ 170
Query: 278 SIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGM 337
+L++DG+ R R + GT Y++PE + + YG
Sbjct: 171 --------SLKNDGK----------------RXR------SKGTLRYMSPEQISSQDYGK 200
Query: 338 ECDWWSLGAIMYEML 352
E D ++LG I+ E+L
Sbjct: 201 EVDLYALGLILAELL 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 100/252 (39%), Gaps = 61/252 (24%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
++G+GA V R K TG ++A+K LR V+ E +L +++ IVKL+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 184 CSFQDD--EYLYLIMEYLPGGDMMTLLMRKDT---LTEEEARFYVGETVLAIESIHKHNY 238
++ + LIME+ P G + T+L L E E + + V + + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 239 IHRDIKPDNLLL----DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
+HR+IKP N++ D KL+DFG + L+
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-------------------------- 167
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE-----VLLK---KGYGMECDWWSLGA 346
EQ S GT +Y+ P+ VL K K YG D WS+G
Sbjct: 168 -----DDEQF-----------VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 347 IMYEMLVGYPPF 358
Y G PF
Sbjct: 212 TFYHAATGSLPF 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KTQHLSNDHICYFLYQILR 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 179
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 180 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 59/272 (21%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYL------YLIMEYLP 200
+KKL + + + E L+ V+ I+ L F + L YL+ME +
Sbjct: 54 IKKLSRP-FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD 112
Query: 201 GGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSD 260
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+ D
Sbjct: 113 ANLXQVIQMELD---HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILD 169
Query: 261 FGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVG 320
FGL + S + M Y V
Sbjct: 170 FGLARTAGTSFM----------------------------------------MTPY--VV 187
Query: 321 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
T Y APEV+L GY D WS+G IM EM+
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 111/272 (40%), Gaps = 63/272 (23%)
Query: 112 HKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL 171
H + + E ++G+GAFG VC+ K A+K+++ SE R+ + E L
Sbjct: 3 HMIDYKEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIE-SESERKAFI----VELRQL 55
Query: 172 AEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEAR------FYVGE 225
+ V+ IVKLY + + + L+MEY GG + +L + L A +
Sbjct: 56 SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGH-MKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
V + S+ IHRD+KP NLLL G +K+ DFG
Sbjct: 114 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---------------------- 151
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
T + H N+ G+ ++APEV Y +CD +S
Sbjct: 152 --------------TACDIQTHMTNNK--------GSAAWMAPEVFEGSNYSEKCDVFSW 189
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTH 376
G I++E++ PF DE +I+ W H
Sbjct: 190 GIILWEVITRRKPF--DEIGGPAFRIM-WAVH 218
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 107/272 (39%), Gaps = 57/272 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G FGEV R +A + A+K + E L E +L + IV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL------MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ +Y++ME + GGD +T L +R TL + VG+ +E +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ-----MVGDAAAGMEYLESKCC 234
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRD+ N L+ +K+SDFG+ + ++DG A
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE---------------------EADGVXAASGG 273
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPP 357
+Q ++ + APE L Y E D WS G +++E +G P
Sbjct: 274 LRQVPVK------------------WTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
Y + R+ V L PE L P+A
Sbjct: 316 -YPNLSNQQTREFVEKGGRLPCPE---LCPDA 343
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 111/272 (40%), Gaps = 63/272 (23%)
Query: 112 HKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLL 171
H + + E ++G+GAFG VC+ K A+K+++ SE R+ + E L
Sbjct: 4 HMIDYKEIEVEEVVGRGAFG--VVCKAKWRAKDVAIKQIE-SESERKAFI----VELRQL 56
Query: 172 AEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEAR------FYVGE 225
+ V+ IVKLY + + + L+MEY GG + +L + L A +
Sbjct: 57 SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 114
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGH-MKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
V + S+ IHRD+KP NLLL G +K+ DFG
Sbjct: 115 GVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---------------------- 152
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
T + H N+ G+ ++APEV Y +CD +S
Sbjct: 153 --------------TACDIQTHMTNNK--------GSAAWMAPEVFEGSNYSEKCDVFSW 190
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTH 376
G I++E++ PF DE +I+ W H
Sbjct: 191 GIILWEVITRRKPF--DEIGGPAFRIM-WAVH 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 46/242 (19%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI-- 179
L+ IG+GA+G V + A+KK+ E Q ++ + LLA N I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENIIGI 88
Query: 180 --VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ + + + +Y++ + L D+ LL + L+ + +++ + + ++ IH N
Sbjct: 89 NDIIRAPTIEQMKDVYIVQD-LMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+KP NLLL+ +K+ DFGL + D P
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVAD---------------------------PD 179
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYP 356
L + V T Y APE++L KGY D WS+G I+ EML P
Sbjct: 180 HDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 357 PF 358
F
Sbjct: 229 IF 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 64/251 (25%)
Query: 122 LTMIGKGAFG----------EVRVCREKAT---GHVYAMKKLKKSEMLRRGQVEHVKAER 168
L+ IG+GA+G +VRV +K + Y + L++ ++L R + E++
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVL 228
+++ + +Y I++ L D+ LL + L+ + +++ + +
Sbjct: 92 DIIRAPTIEQMKDVY-----------IVQDLMETDLYKLL-KCQHLSNDHICYFLYQILR 139
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ IH N +HRD+KP NLLL+ +K+ DFGL + D
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD-------------------- 179
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAI 347
P L + V T Y APE++L KGY D WS+G I
Sbjct: 180 -------PDHDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCI 221
Query: 348 MYEMLVGYPPF 358
+ EML P F
Sbjct: 222 LAEMLSNRPIF 232
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 108/272 (39%), Gaps = 57/272 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG+G FGEV R +A + A+K + E L E +L + IV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL------MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ +Y++ME + GGD +T L +R TL + VG+ +E +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQ-----MVGDAAAGMEYLESKCC 234
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRD+ N L+ +K+SDFG+ + +E D + SG L+ PV
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVYAA--SGGLRQ--VPV---- 279
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-VGYPP 357
+ APE L Y E D WS G +++E +G P
Sbjct: 280 ------------------------KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
Y + R+ V L PE L P+A
Sbjct: 316 -YPNLSNQQTREFVEKGGRLPCPE---LCPDA 343
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 59/291 (20%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYL------YLIMEYLP 200
+KKL + + + E L+ V+ I+ L F + L Y++ME +
Sbjct: 54 IKKLSRP-FQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD 112
Query: 201 GGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSD 260
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+ D
Sbjct: 113 ANLSQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILD 169
Query: 261 FGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVG 320
FGL + S + M Y V
Sbjct: 170 FGLARTAGTSFM----------------------------------------MTPY--VV 187
Query: 321 TPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIV 371
T Y APEV+L GY D WS+G IM EM+ G F + + K++
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNL--LAEVDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L + V+ I+ L F + L YL+ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLXQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 60/257 (23%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEM----LRRGQVE-----HVKAERNLLAEVD 175
+G GA+G V + A+KKL + RR E H+K E N++ +D
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE-NVIGLLD 94
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
+ S +D +YL+ L G D+ ++ + L++E +F V + + ++ IH
Sbjct: 95 ---VFTPATSIEDFSEVYLVTT-LMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
IHRD+KP N+ ++ + +++ DFGL +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR------------------------------ 179
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVG 354
Q + M Y V T Y APE++L Y D WS+G IM E+L G
Sbjct: 180 ------------QADEEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 355 YPPFYSDEPMSTCRKIV 371
F + + ++I+
Sbjct: 226 KALFPGSDYIDQLKRIM 242
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV V K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y++ EY+P G+++ L ++ +T + + A+E + K N+IHRD
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 156 LAARNCLVGENHVVKVADFGLSR 178
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 46/242 (19%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI-- 179
L+ IG+GA+G V + A+KK+ E Q ++ + LLA N I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENIIGI 88
Query: 180 --VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ + + + +Y++ + L D+ LL + L+ + +++ + + ++ IH N
Sbjct: 89 NDIIRAPTIEQMKDVYIVQD-LMETDLYKLL-KTQHLSNDHICYFLYQILRGLKYIHSAN 146
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
+HRD+KP NLLL+ +K+ DFGL + D P
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVAD---------------------------PD 179
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYP 356
L + V T Y APE++L KGY D WS+G I+ EML P
Sbjct: 180 HDHTGFLTEY-----------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 357 PF 358
F
Sbjct: 229 IF 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L YL+ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLXQVIQMELD---HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 109/276 (39%), Gaps = 63/276 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLSQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNL--LAEVDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L + V+ I+ L F + L YL+ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 39 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L YL+ME
Sbjct: 92 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 149 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 206 LDFGLARTAGTSFM----------------------------------------MTPY-- 223
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 39 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L YL+ME
Sbjct: 92 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 149 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 206 LDFGLARTAGTSFM----------------------------------------MTPY-- 223
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 60/257 (23%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEM----LRRGQVE-----HVKAERNLLAEVD 175
+G GA+G V + A+KKL + RR E H+K E N++ +D
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE-NVIGLLD 86
Query: 176 SNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK 235
+ S +D +YL+ L G D+ + ++ L++E +F V + + ++ IH
Sbjct: 87 ---VFTPATSIEDFSEVYLVTT-LMGADLNNI-VKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
IHRD+KP N+ ++ + +++ DFGL +
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLAR------------------------------ 171
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVG 354
Q + M Y V T Y APE++L Y D WS+G IM E+L G
Sbjct: 172 ------------QADEEMTGY--VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
Query: 355 YPPFYSDEPMSTCRKIV 371
F + + ++I+
Sbjct: 218 KALFPGSDYIDQLKRIM 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S+ + +N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L YL+ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 107/278 (38%), Gaps = 63/278 (22%)
Query: 85 AEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHV 144
+S +++N +E ++ + L+R ++ L IG GA G V +
Sbjct: 1 GSMSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERN 53
Query: 145 YAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIM 196
A+KKL + + Q +A R L+ V+ I+ L F + L Y++M
Sbjct: 54 VAIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 110
Query: 197 EYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHM 256
E + + M D E + + + + I+ +H IHRD+KP N+++ + +
Sbjct: 111 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 167
Query: 257 KLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAY 316
K+ DFGL + S +
Sbjct: 168 KILDFGLARTAGTS------------------------------------------FMMV 185
Query: 317 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 186 PFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 56/242 (23%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDS 176
++ L IG GA G V + A+KKL + + Q +A R L+ V+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 75
Query: 177 NCIVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
I+ L F + L YL+ME + + M D E + + + + I
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD---HERMSYLLYQMLXGI 132
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+ +H IHRD+KP N+++ + +K+ DFGL + S +
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFM------------------ 174
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 175 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 351 ML 352
M+
Sbjct: 211 MV 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 127/334 (38%), Gaps = 94/334 (28%)
Query: 124 MIGKGAFGEVRVCR-----EKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+IG G+FG V + E A V K+ K E+ Q+ + N+ VD
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL----QIMRIVKHPNV---VDLKA 99
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR-----KDTLTEEEARFYVGETVLAIESI 233
+D+ +L L++EY+P + + R K T+ + Y+ + + ++ I
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 234 HKHNYIHRDIKPDNLLLD-RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
H HRDIKP NLLLD +G +KL DFG S + G
Sbjct: 158 HSIGICHRDIKPQNLLLDPPSGVLKLIDFG---------------------SAKILIAGE 196
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL-KKGYGMECDWWSLGAIMYEM 351
P S + + Y APE++ Y D WS G +M E+
Sbjct: 197 P---------------------NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAEL 235
Query: 352 LVGYPPFYSDEPMSTCRKIV----------------NWRTHLKFPE----------EAKL 385
+ G P F + + +I+ N+ H KFP+ +
Sbjct: 236 MQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH-KFPQIRPHPFSKVFRPRT 294
Query: 386 SPEAKDLISKLL-CNVEQRLGTKGADEIKAHPWF 418
P+A DLIS+LL RL A E HP+F
Sbjct: 295 PPDAIDLISRLLEYTPSARL---TAIEALCHPFF 325
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 88 SEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAM 147
S+ + +N +E ++ + L+R ++ L IG GA G V + A+
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVAI 54
Query: 148 KKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEYL 199
KKL + + Q +A R L+ V+ I+ L F + L YL+ME +
Sbjct: 55 KKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 112 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 168
Query: 260 DFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTV 319
DFGL + S + M Y V
Sbjct: 169 DFGLARTAGTSFM----------------------------------------MTPY--V 186
Query: 320 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
T Y APEV+L GY D WS+G IM EM+
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 88 SEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAM 147
S+ + +N +E ++ + L+R ++ L IG GA G V + A+
Sbjct: 1 SKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVAI 53
Query: 148 KKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEYL 199
KKL + + Q +A R L+ V+ I+ L F + L YL+ME +
Sbjct: 54 KKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 167
Query: 260 DFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTV 319
DFGL + S + M Y V
Sbjct: 168 DFGLARTAGTSFM----------------------------------------MTPY--V 185
Query: 320 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 88 SEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAM 147
S+ + +N +E ++ + L+R ++ L IG GA G V + A+
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVAI 55
Query: 148 KKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEYL 199
KKL + + Q +A R L+ V+ I+ L F + L YL+ME +
Sbjct: 56 KKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 113 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 260 DFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTV 319
DFGL + S + M Y V
Sbjct: 170 DFGLARTAGTSFM----------------------------------------MTPY--V 187
Query: 320 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
T Y APEV+L GY D WS+G IM EM+
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FGEV + + V A+K LK M V+ E NL+ + + +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKD---TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+E +Y+I EY+ G ++ L + L + F + + I + NYIHR
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERKNYIHR 134
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLD 268
D++ N+L+ + K++DFGL + ++
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIE 161
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 109/276 (39%), Gaps = 63/276 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 88 SEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAM 147
S+ + +N +E ++ + L+R ++ L IG GA G V + A+
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAVLDRNVAI 55
Query: 148 KKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEYL 199
KKL + + Q +A R L+ V+ I+ L F + L YL+ME +
Sbjct: 56 KKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 113 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 260 DFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTV 319
DFGL + S + M Y V
Sbjct: 170 DFGLARTAGTSFM----------------------------------------MTPY--V 187
Query: 320 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
T Y APEV+L GY D WS+G IM EM+
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 100/252 (39%), Gaps = 61/252 (24%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
++G+GA V R K TG ++A+K LR V+ + E +L +++ IVKL+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE--VLKKLNHKNIVKLF 73
Query: 184 CSFQDD--EYLYLIMEYLPGGDMMTLLMRKDT---LTEEEARFYVGETVLAIESIHKHNY 238
++ + LIME+ P G + T+L L E E + + V + + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 239 IHRDIKPDNLLL----DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
+HR+IKP N++ D KL+DFG + L+
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-------------------------- 167
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE-----VLLK---KGYGMECDWWSLGA 346
EQ GT +Y+ P+ VL K K YG D WS+G
Sbjct: 168 -----DDEQF-----------VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 347 IMYEMLVGYPPF 358
Y G PF
Sbjct: 212 TFYHAATGSLPF 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 29 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 82
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 83 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 201
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 202 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 238
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 109/276 (39%), Gaps = 63/276 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLSQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + E +
Sbjct: 168 LDFGLARTAGTSFMMEPE------------------------------------------ 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 108/276 (39%), Gaps = 63/276 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + +
Sbjct: 168 LDFGLARTAGTSFMMTPE------------------------------------------ 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 27 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 80
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 81 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 31 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 84
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 85 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 203
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 204 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 30 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 83
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 84 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 202
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 203 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 108/274 (39%), Gaps = 63/274 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + E +
Sbjct: 168 LDFGLARTAGTSFMMEPE------------------------------------------ 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 26 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 79
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 80 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 198
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 199 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 235
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 80
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 81 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 199
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 200 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 109/276 (39%), Gaps = 63/276 (22%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYA 146
+S +++N +E ++ + L+R ++ L IG GA G V + A
Sbjct: 1 MSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVA 53
Query: 147 MKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEY 198
+KKL + + Q +A R L+ V+ I+ L F + L Y++ME
Sbjct: 54 IKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 199 LPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKL 258
+ + M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 111 MDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 259 SDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYST 318
DFGL + S + M Y
Sbjct: 168 LDFGLARTAGTSFM----------------------------------------MTPY-- 185
Query: 319 VGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 23 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 76
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 77 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 195
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 196 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 232
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 74
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 75 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 55/257 (21%)
Query: 125 IGKGAFGEVRVCREKA----TGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+G+G FG+V +CR TG A+K LK + +K E +L + IV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 86
Query: 181 KL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIESIHKHN 237
K C+ + LIME+LP G + L + K+ + ++ Y + ++ +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
Y+HRD+ N+L++ +K+ DFGL K A+++D +
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTK--------------------AIETDKEXXTVK 186
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
R+ + Y APE L++ + + D WS G ++E+L
Sbjct: 187 D---------DRDSPVFWY---------APECLMQSKFYIASDVWSFGVTLHELLT---- 224
Query: 358 FYSD---EPMSTCRKIV 371
Y D PM+ K++
Sbjct: 225 -YCDSDSSPMALFLKMI 240
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 107/279 (38%), Gaps = 63/279 (22%)
Query: 118 DFEPLTM---IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQ-VEHVKAERNLLAE 173
DF LT+ IG G FG +V R G A+K + Q +E+V+ E L A
Sbjct: 5 DFAELTLEEIIGIGGFG--KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----DTLTEEEARFYVGETVLA 229
+ I+ L + L L+ME+ GG + +L K D L + G L
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 230 IESIHKHNYIHRDIKPDNLLLDR--------NGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
E+I IHRD+K N+L+ + N +K++DFGL +
Sbjct: 123 DEAIVP--IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---------------- 164
Query: 282 NLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 341
W R +M S G ++APEV+ + D
Sbjct: 165 ------------------------EWHRTTKM---SAAGAYAWMAPEVIRASMFSKGSDV 197
Query: 342 WSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFP 380
WS G +++E+L G PF + ++ + + L P
Sbjct: 198 WSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 63/275 (22%)
Query: 88 SEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAM 147
S +++N +E ++ + L+R ++ L IG GA G V + A+
Sbjct: 3 SRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERNVAI 55
Query: 148 KKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIMEYL 199
KKL + + Q +A R L+ V+ I+ L F + L Y++ME +
Sbjct: 56 KKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 200 PGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
+ M D E + + + + I+ +H IHRD+KP N+++ + +K+
Sbjct: 113 DANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 169
Query: 260 DFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTV 319
DFGL + S + M Y V
Sbjct: 170 DFGLARTAGTSFM----------------------------------------MTPY--V 187
Query: 320 GTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVG 354
T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 22 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 75
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 76 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 194
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 195 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 56/242 (23%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDS 176
++ L IG GA G V + A+KKL + + Q +A R L+ V+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 76
Query: 177 NCIVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
I+ L F + L YL+ME + + M D E + + + + I
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 133
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+ +H IHRD+KP N+++ + +K+ DFGL + S +
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM------------------ 175
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 176 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 351 ML 352
M+
Sbjct: 212 MV 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 74
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 75 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 55/257 (21%)
Query: 125 IGKGAFGEVRVCREKA----TGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+G+G FG+V +CR TG A+K LK + +K E +L + IV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 74
Query: 181 KL--YCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIESIHKHN 237
K C+ + LIME+LP G + L + K+ + ++ Y + ++ +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
Y+HRD+ N+L++ +K+ DFGL K A+++D +
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTK--------------------AIETDKEXXTVK 174
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
R+ + Y APE L++ + + D WS G ++E+L
Sbjct: 175 D---------DRDSPVFWY---------APECLMQSKFYIASDVWSFGVTLHELLT---- 212
Query: 358 FYSD---EPMSTCRKIV 371
Y D PM+ K++
Sbjct: 213 -YCDSDSSPMALFLKMI 228
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 56/242 (23%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDS 176
++ L IG GA G V + A+KKL + + Q +A R L+ V+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 76
Query: 177 NCIVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
I+ L F + L YL+ME + + M D E + + + + I
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 133
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+ +H IHRD+KP N+++ + +K+ DFGL + S +
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM------------------ 175
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 176 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 351 ML 352
M+
Sbjct: 212 MV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 94/242 (38%), Gaps = 56/242 (23%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDS 176
++ L IG GA G V + A+KKL + + Q +A R L+ V+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 75
Query: 177 NCIVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
I+ L F + L YL+ME + + M D E + + + + I
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 132
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+ +H IHRD+KP N+++ + +K+ DFGL + S +
Sbjct: 133 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM------------------ 174
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 175 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 351 ML 352
M+
Sbjct: 211 MV 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 74
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 75 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
F + +G G FG V +C+ YA+K ++ + R K E ++L ++ ++
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRS----AKIEADILKKIQNDD 92
Query: 179 I-----VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT--LTEEEARFYVGETVLAIE 231
I VK + F +++ LI E L G + ++ R + E+ + Y E + A+
Sbjct: 93 INNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALN 151
Query: 232 SIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
+ K + H D+KP+N+LLD K S ++ +DG
Sbjct: 152 YLRKMSLTHTDLKPENILLDDPYFEK-----------------------SLITVRRVTDG 188
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAY----STVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+ + RT+ ++ S + T Y APEV+L G+ + D WS G +
Sbjct: 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248
Query: 348 MYEMLVGYPPFYSDEPM 364
+ E+ G F + E M
Sbjct: 249 LAELYTGSLLFRTHEHM 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 16 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 69
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 70 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 225
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FGEV + + V A+K LK M V+ E NL+ + + +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKD---TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+E +Y+I E++ G ++ L + L + F + + I + NYIHR
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERKNYIHR 133
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLD 268
D++ N+L+ + K++DFGL + ++
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIE 160
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 108/276 (39%), Gaps = 63/276 (22%)
Query: 85 AEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHV 144
+S +++N +E ++ + L+R ++ L IG GA G V +
Sbjct: 4 GSMSRSKRDNNFYSVEIGDSTFTVLKR-------YQNLKPIGSGAQGIVCAAYDAILERN 56
Query: 145 YAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDSNCIVKLYCSFQDDEYL------YLIM 196
A+KKL + + Q +A R L+ V+ I+ L F + L Y++M
Sbjct: 57 VAIKKLSRP---FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 113
Query: 197 EYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHM 256
E + + M D E + + + + I+ +H IHRD+KP N+++ + +
Sbjct: 114 ELMDANLCQVIQMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 170
Query: 257 KLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAY 316
K+ DFGL + S + M Y
Sbjct: 171 KILDFGLARTAGTSFM----------------------------------------MTPY 190
Query: 317 STVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V T Y APEV+L GY D WS+G IM EM+
Sbjct: 191 --VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++MEY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 48/267 (17%)
Query: 105 EYMRLQRHKMGADDFEPLTM--IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE 162
E + Q H + D+ L + +G+G F V + GH YA+K++ E R E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---E 71
Query: 163 HVKAERNLLAEVDSNCIVKL--YCSFQDD--EYLYLIMEYLPGGDMMTLLMR----KDTL 214
+ E ++ + I++L YC + +L++ + G + + R + L
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131
Query: 215 TEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQE 274
TE++ + + +E+IH Y HRD+KP N+LL G L D
Sbjct: 132 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMD-------------- 177
Query: 275 KDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG 334
+GS + +G Q LQ W R ++Y APE+ +
Sbjct: 178 ----LGSMNQACIHVEG------SRQALTLQDWAAQRCTISYR--------APELFSVQS 219
Query: 335 YGM---ECDWWSLGAIMYEMLVGYPPF 358
+ + D WSLG ++Y M+ G P+
Sbjct: 220 HCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 61/307 (19%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVE-HVKAERNLLAEVDSNCIVKL 182
++G+G++G+V+ + T A+K LKK ++ R E +VK E LL + +++L
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 183 YCSFQDDEY--LYLIMEYLPGGDMMTLLMRKDTLTEE-----EARFYVGETVLAIESIHK 235
++E +Y++MEY G M +L D++ E+ +A Y + + +E +H
Sbjct: 72 VDVLYNEEKQKMYMVMEYCVCG-MQEML---DSVPEKRFPVCQAHGYFCQLIDGLEYLHS 127
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVA 295
+H+DIKP NLLL G +K+S G+ + L P A
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKISALGVAEAL------------------------HPFA 163
Query: 296 PRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL--LKKGYGMECDWWSLGAIMYEMLV 353
T + ++ G+P + PE+ L G + D WS G +Y +
Sbjct: 164 ADDTCR---------------TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208
Query: 354 GYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEI 412
G PF D I + P + P DL+ +L +R + +I
Sbjct: 209 GLYPFEGDNIYKLFENI--GKGSYAIPGDC--GPPLSDLLKGMLEYEPAKRFSIR---QI 261
Query: 413 KAHPWFK 419
+ H WF+
Sbjct: 262 RQHSWFR 268
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 39/249 (15%)
Query: 119 FEPLTMIGKGAFGEVRVCRE-KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS- 176
+E ++ +G+G FG V C + + G A+K +K E + E + E N+L +++
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINVLEKINEK 90
Query: 177 -----NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE--EEARFYVGETVLA 229
N V+++ F ++ + E L G L + L + R + A
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 230 IESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
++ +H + H D+KP+N+L SD+ L L+ +++D +++S
Sbjct: 150 VKFLHDNKLTHTDLKPENILFVN------SDYELTYNLE----KKRD-------ERSVKS 192
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMY 349
V + +H + V T Y APEV+L+ G+ CD WS+G I++
Sbjct: 193 TAVRVVDFGSATFDHEHHS--------TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIF 244
Query: 350 EMLVGYPPF 358
E VG+ F
Sbjct: 245 EYYVGFTLF 253
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G FGEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 17 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 70
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDT--LTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 71 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
+++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 226
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKIRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y+++EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y+++EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 275 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 328
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-----MAYVERMN 383
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
Y+HRD++ N+L+ N K++DFGL +
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLAR 411
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 94/242 (38%), Gaps = 56/242 (23%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE--VDS 176
++ L IG GA G V + A+KKL + + Q +A R L+ V+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP---FQNQTHAKRAYRELVLMKCVNH 76
Query: 177 NCIVKLYCSFQDDEYL------YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
I+ L F + L Y++ME + + M D E + + + + I
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD---HERMSYLLYQMLCGI 133
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+ +H IHRD+KP N+++ + +K+ DFGL + S +
Sbjct: 134 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM------------------ 175
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
M Y V T Y APEV+L GY D WS+G IM E
Sbjct: 176 ----------------------MTPY--VVTRYYRAPEVILGMGYKENVDLWSVGCIMGE 211
Query: 351 ML 352
M+
Sbjct: 212 MV 213
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG-----MAYVERMN 131
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 19 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 72
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-----MAYVERMN 127
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIE 158
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 245
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-----MAYVERMN 300
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FGEV + V A+K +K M VE AE N++ + + +VKL+
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLH- 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF--YVGETVLAIESIHKHNYIHRD 242
+ E +Y+I E++ G ++ L + + + + + + I + NYIHRD
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCKPLD 268
++ N+L+ + K++DFGL + ++
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIE 162
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 245
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-----MAYVERMN 300
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 15 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 68
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 123
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
Y+HRD++ N+L+ N K++DFGL +
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLAR 151
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M L + +M D +G G FGEV K A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVG 224
E ++ E+ +V+L + Y+I E++ G+++ L + ++ +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+ A+E + K N+IHRD+ N L+ N +K++DFGL +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 17 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 70
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 125
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
Y+HRD++ N+L+ N K++DFGL +
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLAR 153
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG-----MAYVERMN 131
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLY 183
+G G GEV + GH A+K LK+ M + AE NL+ ++ +V+LY
Sbjct: 21 LGAGQAGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLY 74
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAIESIHKHNYIHR 241
+ E +Y+I EY+ G ++ L LT + + + I + NYIHR
Sbjct: 75 -AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 242 DIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKD------------------FSIGSN- 282
D++ N+L+ K++DFGL + ++ + ++ F+I S+
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 283 -----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRML 314
L + + GR P T E +Q+ +R RM+
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FGEV + V A+K +K M VE AE N++ + + +VKL+
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF--YVGETVLAIESIHKHNYIHRD 242
E +Y+I E++ G ++ L + + + + + + I + NYIHRD
Sbjct: 245 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
++ N+L+ + K++DFGL +
Sbjct: 304 LRAANILVSASLVCKIADFGLAR 326
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FGEV + V A+K +K M VE AE N++ + + +VKL+
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF--YVGETVLAIESIHKHNYIHRD 242
E +Y+I E++ G ++ L + + + + + + I + NYIHRD
Sbjct: 251 VVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 309
Query: 243 IKPDNLLLDRNGHMKLSDFGLCKPLD 268
++ N+L+ + K++DFGL + ++
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIE 335
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 245
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-----MAYVERMN 300
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 193 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGNM----SPEAFLQEAQVMKKLRHEKLVQLY- 246
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 301
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIE 332
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D +PL G G G V + A+KK+ ++ V+H E ++ +D +
Sbjct: 15 DLKPL---GCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRRLDHD 68
Query: 178 CIVKLY-------CSFQDD-------EYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYV 223
IVK++ DD +Y++ EY+ D+ +L + L EE AR ++
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL-EQGPLLEEHARLFM 126
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLD-RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ + ++ IH N +HRD+KP NL ++ + +K+ DFGL + +D +S +
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD------PHYSHKGH 180
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
LS L + W R+ R+L L Y D W
Sbjct: 181 LSEGLVTK----------------WYRSPRLL---------------LSPNNYTKAIDMW 209
Query: 343 SLGAIMYEMLVG 354
+ G I EML G
Sbjct: 210 AAGCIFAEMLTG 221
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIE 165
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 125 IGKGAFGEVRV-CRE---KATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVDSNC 178
+G+G FG+V + C + TG + A+K LK+ LR G ++ R L E
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 72
Query: 179 IVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
IVK C Q ++ + L+MEY+P G + L R + + + + + +H
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQ 131
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+YIHR + N+LLD + +K+ DFGL K +
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAV 162
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 125 IGKGAFGEVRV-CRE---KATGHVYAMKKLKKS--EMLRRGQVEHVKAERNLLAEVDSNC 178
+G+G FG+V + C + TG + A+K LK+ LR G ++ R L E
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 71
Query: 179 IVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
IVK C Q ++ + L+MEY+P G + L R + + + + + +H
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH-CVGLAQLLLFAQQICEGMAYLHAQ 130
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+YIHR + N+LLD + +K+ DFGL K +
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAV 161
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 95/237 (40%), Gaps = 51/237 (21%)
Query: 125 IGKGAFGEVRV-CRE---KATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
+G+G FG+V + C + TG + A+K LK R G + + R L E
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH---- 77
Query: 179 IVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I+K C Q ++ L L+MEY+P G + L R ++ + + + + +H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
+YIHR++ N+LLD + +K+ DFGL K + +G
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV---------------------PEGHEYYR 175
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 353
R + W APE L + + D WS G +YE+L
Sbjct: 176 VREDGDSPVFW-----------------YAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 18/151 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 79
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG-----MAYVERMN 134
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD++ N+L+ N K++DFGL + ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 105/267 (39%), Gaps = 70/267 (26%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRR--------------GQVE 162
+D+ + + +G F ++ +C + YA+KK +KS + ++ + +
Sbjct: 31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYD 88
Query: 163 HVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFY 222
K E ++ ++ + + + + +Y+I EY+ ++ L + F
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 223 -------VGETVL-AIESIHKH-NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQ 273
+ ++VL + IH N HRD+KP N+L+D+NG +KLSDFG
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG----------- 197
Query: 274 EKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK 333
E ++ + + G+ GT +++ PE +
Sbjct: 198 ESEYMVDKKIKGSR--------------------------------GTYEFMPPEFFSNE 225
Query: 334 GY--GMECDWWSLGAIMYEMLVGYPPF 358
G + D WSLG +Y M PF
Sbjct: 226 SSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 125 IGKGAFGEVRV-CRE---KATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
+G+G FG+V + C + TG + A+K LK R G + + R L E
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH---- 77
Query: 179 IVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I+K C Q ++ L L+MEY+P G + L R ++ + + + + +H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+YIHR++ N+LLD + +K+ DFGL K
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 107 MRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
M L + +M D +G G +GEV K A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVG 224
E ++ E+ +V+L + Y+I E++ G+++ L + ++ +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+ A+E + K N+IHRD+ N L+ N +K++DFGL +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 66/299 (22%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D L +G G FG V+ + + V A+K +K+ M +E K NL E
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 80
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHK 235
+V+LY +++I EY+ G ++ L MR T++ + A+E +
Sbjct: 81 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCK-PLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
++HRD+ N L++ G +K+SDFGL + LD E+ S+GS PV
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEETSSVGSKF---------PV 185
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-V 353
W PEVL+ + + D W+ G +M+E+ +
Sbjct: 186 -----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 354 GYPPFYSDEPMSTCRKIVN----WRTHLK-----------FPEEAKLSPEAKDLISKLL 397
G P+ T I +R HL + E+A P K L+S +L
Sbjct: 218 GKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 45/248 (18%)
Query: 119 FEPLTMIGKGA--FGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+E LT+IGKG V + R K TG ++++ E V ++ E ++ +
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 69
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIH 234
IV +F D L+++ ++ G L+ D + E + + + A++ IH
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
Y+HR +K ++L+ +G + LS + SNLS
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLS------------------GLRSNLS---------- 161
Query: 295 APRRTQQEQLQHWQRNRRMLAYS--TVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYE 350
+ H QR R + + +V +++PEVL + +GY + D +S+G E
Sbjct: 162 --------MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 213
Query: 351 MLVGYPPF 358
+ G+ PF
Sbjct: 214 LANGHVPF 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVR--VCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
L+R + D E +G G FG VR V R + A+K LK+ + E +
Sbjct: 6 LKRDNLLIADIE----LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMR 59
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGE 225
E ++ ++D+ IV+L Q E L L+ME GG + L+ +++ + + +
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 118
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 119 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 78/308 (25%)
Query: 167 ERNLLAEVDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF---- 221
E LL E D + +++ YCS D +LY+ +E L ++ L+ K+ +++E +
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKN-VSDENLKLQKEY 133
Query: 222 ----YVGETVLAIESIHKHNYIHRDIKPDNLLLD-------------RNGHMKLSDFGLC 264
+ + + +H IHRD+KP N+L+ N + +SDFGLC
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 265 KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDY 324
K LD SG Q R + GT +
Sbjct: 194 KKLD---------------SG----------------------QXXFRXNLNNPSGTSGW 216
Query: 325 IAPEVL---LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDEPMSTCRKIVNWRTHL 377
APE+L K+ D +S+G + Y +L G PF YS E + R I + +
Sbjct: 217 RAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL-DEM 274
Query: 378 KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEV 437
K + L EA DLIS+++ + L A ++ HP F W K K F+ +V
Sbjct: 275 KCLHDRSLIAEATDLISQMIDH--DPLKRPTAMKVLRHPLF----WPK--SKKLEFLLKV 326
Query: 438 NDELDTQN 445
+D L+ +N
Sbjct: 327 SDRLEIEN 334
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 45/248 (18%)
Query: 119 FEPLTMIGKGA--FGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDS 176
+E LT+IGKG V + R K TG ++++ E V ++ E ++ +
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 85
Query: 177 NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIH 234
IV +F D L+++ ++ G L+ D + E + + + A++ IH
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 235 KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
Y+HR +K ++L+ +G + LS + SNLS
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLS------------------GLRSNLS---------- 177
Query: 295 APRRTQQEQLQHWQRNRRMLAYS--TVGTPDYIAPEVLLK--KGYGMECDWWSLGAIMYE 350
+ H QR R + + +V +++PEVL + +GY + D +S+G E
Sbjct: 178 --------MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACE 229
Query: 351 MLVGYPPF 358
+ G+ PF
Sbjct: 230 LANGHVPF 237
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 117 DDFEPLT-MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVD 175
DD++ + ++G G G+V K T +A+K L+ RR H +A
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRA--------- 67
Query: 176 SNC-----IVKLYCS-FQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETV 227
S C IV +Y + + + L ++ME L GG++ + + + TE EA +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDR---NGHMKLSDFGLCK 265
AI+ +H N HRD+KP+NLL N +KL+DFG K
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 335 YGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTC----RKIVNWRTHLKFPEEAKLSPEAK 390
Y CD WSLG IMY +L GYPPFYS+ ++ +I + PE +++S E K
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 391 DLISKLL-CNVEQRLGTKGADEIKAHPWF 418
LI LL QR+ E HPW
Sbjct: 235 MLIRNLLKTEPTQRMTI---TEFMNHPWI 260
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 78/308 (25%)
Query: 167 ERNLLAEVDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF---- 221
E LL E D + +++ YCS D +LY+ +E L ++ L+ K+ +++E +
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKN-VSDENLKLQKEY 133
Query: 222 ----YVGETVLAIESIHKHNYIHRDIKPDNLLLD-------------RNGHMKLSDFGLC 264
+ + + +H IHRD+KP N+L+ N + +SDFGLC
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 265 KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDY 324
K LD SG Q R + GT +
Sbjct: 194 KKLD---------------SG----------------------QXXFRXNLNNPSGTSGW 216
Query: 325 IAPEVL---LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDEPMSTCRKIVNWRTHL 377
APE+L K+ D +S+G + Y +L G PF YS E + R I + +
Sbjct: 217 RAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL-DEM 274
Query: 378 KFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEV 437
K + L EA DLIS+++ + L A ++ HP F W K K F+ +V
Sbjct: 275 KCLHDRSLIAEATDLISQMIDH--DPLKRPTAMKVLRHPLF----WPK--SKKLEFLLKV 326
Query: 438 NDELDTQN 445
+D L+ +N
Sbjct: 327 SDRLEIEN 334
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I+E++ G+++ L + ++ + + A+E + K N+IHRD
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 134
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 135 LAARNCLVGENHLVKVADFGLSR 157
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV--- 174
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 64
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----DTLTEEEARFYVGETVLAI 230
+ +V+ + ++ +D+++ + EY GG + + E E + + + +
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 231 ESIHKHNYIHRDIKPDNLLLDRN 253
IH + +H DIKP N+ + R
Sbjct: 125 RYIHSMSLVHMDIKPSNIFISRT 147
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV--- 174
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 66
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----DTLTEEEARFYVGETVLAI 230
+ +V+ + ++ +D+++ + EY GG + + E E + + + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 231 ESIHKHNYIHRDIKPDNLLLDRN 253
IH + +H DIKP N+ + R
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRT 149
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 127/315 (40%), Gaps = 71/315 (22%)
Query: 114 MGADDFEP-----LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
MG+ + +P L +G G FG V+ + + V A+K +K+ M +E K
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMM 59
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGET 226
NL E +V+LY +++I EY+ G ++ L MR T++ +
Sbjct: 60 NLSHEK----LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDV 114
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK-PLDCSNLQEKDFSIGSNLSG 285
A+E + ++HRD+ N L++ G +K+SDFGL + LD E S+GS
Sbjct: 115 CEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF-- 168
Query: 286 ALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 345
PV W PEVL+ + + D W+ G
Sbjct: 169 -------PV-----------RWS-----------------PPEVLMYSKFSSKSDIWAFG 193
Query: 346 AIMYEML-VGYPPFYSDEPMSTCRKIVN----WRTHLK-----------FPEEAKLSPEA 389
+M+E+ +G P+ T I +R HL + E+A P
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
Query: 390 KDLISKLLCNVEQRL 404
K L+S +L +++ L
Sbjct: 254 KILLSNILDVMDENL 268
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV--- 174
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 66
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----DTLTEEEARFYVGETVLAI 230
+ +V+ + ++ +D+++ + EY GG + + E E + + + +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 231 ESIHKHNYIHRDIKPDNLLLDRN 253
IH + +H DIKP N+ + R
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRT 149
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV--- 174
+F L IG G FG V C ++ G +YA+K+ KK G V+ A R + A
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVDEQNALREVYAHAVLG 68
Query: 175 DSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----DTLTEEEARFYVGETVLAI 230
+ +V+ + ++ +D+++ + EY GG + + E E + + + +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 231 ESIHKHNYIHRDIKPDNLLLDRN 253
IH + +H DIKP N+ + R
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISRT 151
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I+E++ G+++ L + ++ + + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR 159
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I+E++ G+++ L + ++ + + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR 159
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 66/299 (22%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D L +G G FG V+ + + V A+K +K+ M +E K NL E
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 80
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHK 235
+V+LY +++I EY+ G ++ L MR T++ + A+E +
Sbjct: 81 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCK-PLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
++HRD+ N L++ G +K+SDFGL + LD E S+GS PV
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF---------PV 185
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-V 353
W PEVL+ + + D W+ G +M+E+ +
Sbjct: 186 -----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 354 GYPPFYSDEPMSTCRKIVN----WRTHLK-----------FPEEAKLSPEAKDLISKLL 397
G P+ T I +R HL + E+A P K L+S +L
Sbjct: 218 GKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 66/299 (22%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D L +G G FG V+ + + V A+K +K+ M +E K NL E
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 64
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHK 235
+V+LY +++I EY+ G ++ L MR T++ + A+E +
Sbjct: 65 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 122
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCK-PLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
++HRD+ N L++ G +K+SDFGL + LD E S+GS PV
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF---------PV 169
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-V 353
W PEVL+ + + D W+ G +M+E+ +
Sbjct: 170 -----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSL 201
Query: 354 GYPPFYSDEPMSTCRKIVN----WRTHLK-----------FPEEAKLSPEAKDLISKLL 397
G P+ T I +R HL + E+A P K L+S +L
Sbjct: 202 GKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 260
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 51/245 (20%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D L +G G FG V+ + + V A+K +K+ M +E K NL E
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 60
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHK 235
+V+LY +++I EY+ G ++ L MR T++ + A+E +
Sbjct: 61 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 118
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCK-PLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
++HRD+ N L++ G +K+SDFGL + LD E S+GS PV
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF---------PV 165
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-V 353
W PEVL+ + + D W+ G +M+E+ +
Sbjct: 166 -----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
Query: 354 GYPPF 358
G P+
Sbjct: 198 GKMPY 202
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 66/299 (22%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D L +G G FG V+ + + V A+K +K+ M +E K NL E
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 71
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHK 235
+V+LY +++I EY+ G ++ L MR T++ + A+E +
Sbjct: 72 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 129
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCK-PLDCSNLQEKDFSIGSNLSGALQSDGRPV 294
++HRD+ N L++ G +K+SDFGL + LD E S+GS PV
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKF---------PV 176
Query: 295 APRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML-V 353
W PEVL+ + + D W+ G +M+E+ +
Sbjct: 177 -----------RWS-----------------PPEVLMYSKFSSKSDIWAFGVLMWEIYSL 208
Query: 354 GYPPFYSDEPMSTCRKIVN----WRTHLK-----------FPEEAKLSPEAKDLISKLL 397
G P+ T I +R HL + E+A P K L+S +L
Sbjct: 209 GKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 267
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 125 IGKGAFGEVRV-CRE---KATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
+G+G FG+V + C + TG + A+K LK R G + + R L E
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH---- 94
Query: 179 IVKL--YCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH 236
I+K C L L+MEY+P G + L R ++ + + + + +H
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+YIHRD+ N+LLD + +K+ DFGL K
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I+E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSR 160
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 117/294 (39%), Gaps = 66/294 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK-KSEMLRRGQVEHVKAERNLLAEVD 175
D +E ++IGKG+FG+V ++ A+K +K K L + Q+E E L+ + D
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHD 92
Query: 176 SNC---IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD------TLTEEEARFYVGET 226
+ IV L F +L L+ E L ++ LL + LT + A+ T
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMC--T 149
Query: 227 VLAIESIHKHNYIHRDIKPDNLLL--DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
L + + + IH D+KP+N+LL + +K+ DFG
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---------------------- 187
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
Q QR Y + + Y +PEVLL Y + D WSL
Sbjct: 188 -----------------SSCQLGQR-----IYQXIQSRFYRSPEVLLGMPYDLAIDMWSL 225
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKL--SPEAKDLISKL 396
G I+ EM G P F + KIV L P L +P+A+ KL
Sbjct: 226 GCILVEMHTGEPLFSGANEVDQMNKIVEV---LGIPPAHILDQAPKARKFFEKL 276
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I+E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSR 164
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 55/247 (22%)
Query: 124 MIGKGAFGEVRVCREKATG---HVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G FGEV R KA G A+K LK R Q +E +++ + + I+
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER--QRREFLSEASIMGQFEHPNII 78
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH------ 234
+L + + ++ E++ G + + L D +F V + V + I
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLND------GQFTVIQLVGMLRGIASGMRYL 132
Query: 235 -KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+ +Y+HRD+ N+L++ N K+SDFGL + L+ ++ D + S+L G +
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS---SDPTYTSSLGGKI------ 183
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 352
P R + APE + + + D WS G +M+E++
Sbjct: 184 --PIR-------------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
Query: 353 VGYPPFY 359
G P++
Sbjct: 217 FGERPYW 223
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 18/148 (12%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G+G FGEV + T V A+K LK M E E ++ ++ +V+LY
Sbjct: 16 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLY- 69
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E + ++ EY+ G ++ L +R L + A+ G + + + N
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG-----MAYVERMN 124
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
Y+HRD++ N+L+ N K++DFGL +
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLAR 152
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + ++ + + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSR 164
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + ++ + + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR 159
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 117/294 (39%), Gaps = 66/294 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK-KSEMLRRGQVEHVKAERNLLAEVD 175
D +E ++IGKG+FG+V ++ A+K +K K L + Q+E E L+ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHD 111
Query: 176 SNC---IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD------TLTEEEARFYVGET 226
+ IV L F +L L+ E L ++ LL + LT + A+ T
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMC--T 168
Query: 227 VLAIESIHKHNYIHRDIKPDNLLL--DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
L + + + IH D+KP+N+LL + +K+ DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---------------------- 206
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
Q QR Y + + Y +PEVLL Y + D WSL
Sbjct: 207 -----------------SSCQLGQR-----IYQXIQSRFYRSPEVLLGMPYDLAIDMWSL 244
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKL--SPEAKDLISKL 396
G I+ EM G P F + KIV L P L +P+A+ KL
Sbjct: 245 GCILVEMHTGEPLFSGANEVDQMNKIVEV---LGIPPAHILDQAPKARKFFEKL 295
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + ++ + + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR 159
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAE-RNLLAEVD 175
+D + +IG+G FG+V R K G L+ ++R + K + R+ E++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELE 77
Query: 176 SNC-------IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------D 212
C I+ L + + YLYL +EY P G+++ L +
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 213 TLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
TL+ ++ + + ++ + + +IHRD+ N+L+ N K++DFGL +
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAE-RNLLAEVD 175
+D + +IG+G FG+V R K G L+ ++R + K + R+ E++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELE 67
Query: 176 SNC-------IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------D 212
C I+ L + + YLYL +EY P G+++ L +
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 213 TLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
TL+ ++ + + ++ + + +IHRD+ N+L+ N K++DFGL +
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 137
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 138 LAARNCLVGENHLVKVADFGLSR 160
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 97/251 (38%), Gaps = 63/251 (25%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G GEV R + G A+K LK R Q +E +++ + D I+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNII 113
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH---- 236
+L ++ EY+ G + T L D +F + + V + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD------GQFTIMQLVGMLRGVGAGMRYL 167
Query: 237 ---NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
Y+HRD+ N+L+D N K+SDFGL + L E D P
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL------EDD----------------P 205
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYE 350
A AY+T G + APE + + + D WS G +M+E
Sbjct: 206 DA-------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWE 246
Query: 351 MLV-GYPPFYS 360
+L G P+++
Sbjct: 247 VLAYGERPYWN 257
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 107/280 (38%), Gaps = 51/280 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V R + G A+K L + + +V E ++ + IV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMR---KDTLTEEEARFYVGETVLAIESIHKHN--YI 239
+ L ++ EYL G + LL + ++ L E + + +H N +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRT 299
HRD+K NLL+D+ +K+ DFGL S L+ F
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGL------SRLKASXF---------------------- 193
Query: 300 QQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY 359
+ + GTP+++APEVL + + D +S G I++E+ P+
Sbjct: 194 -------------LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
Query: 360 SDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCN 399
+ P + L+ P L+P+ +I N
Sbjct: 241 NLNPAQVVAAVGFKCKRLEIPR--NLNPQVAAIIEGCWTN 278
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 82/312 (26%)
Query: 167 ERNLLAEVDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF---- 221
E LL E D + +++ YCS D +LY+ +E L ++ L+ K+ +++E +
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKN-VSDENLKLQKEY 115
Query: 222 ----YVGETVLAIESIHKHNYIHRDIKPDNLLLD-------------RNGHMKLSDFGLC 264
+ + + +H IHRD+KP N+L+ N + +SDFGLC
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 265 KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDY 324
K LD SG Q + R + GT +
Sbjct: 176 KKLD---------------SG----------------------QSSFRTNLNNPSGTSGW 198
Query: 325 IAPEVL-------LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDEPMSTCRKIVNW 373
APE+L K+ D +S+G + Y +L G PF YS E + R I +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL 257
Query: 374 RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAF 433
+K + L EA DLIS+++ + L A ++ HP F W K K F
Sbjct: 258 -DEMKCLHDRSLIAEATDLISQMIDH--DPLKRPTAMKVLRHPLF----WPK--SKKLEF 308
Query: 434 IPEVNDELDTQN 445
+ +V+D L+ +N
Sbjct: 309 LLKVSDRLEIEN 320
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSR 164
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSR 161
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 117/294 (39%), Gaps = 66/294 (22%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK-KSEMLRRGQVEHVKAERNLLAEVD 175
D +E ++IGKG+FG+V ++ A+K +K K L + Q+E E L+ + D
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKHD 111
Query: 176 SNC---IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD------TLTEEEARFYVGET 226
+ IV L F +L L+ E L ++ LL + LT + A+ T
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMC--T 168
Query: 227 VLAIESIHKHNYIHRDIKPDNLLL--DRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLS 284
L + + + IH D+KP+N+LL + +K+ DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG---------------------- 206
Query: 285 GALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSL 344
Q QR Y + + Y +PEVLL Y + D WSL
Sbjct: 207 -----------------SSCQLGQR-----IYQXIQSRFYRSPEVLLGMPYDLAIDMWSL 244
Query: 345 GAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKL--SPEAKDLISKL 396
G I+ EM G P F + KIV L P L +P+A+ KL
Sbjct: 245 GCILVEMHTGEPLFSGANEVDQMNKIVEV---LGIPPAHILDQAPKARKFFEKL 295
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSR 164
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVR--VCREKATGHVYAMKKLKKSEMLRRGQVEHVKA 166
L+R + D E +G G FG VR V R + A+K LK+ + E +
Sbjct: 332 LKRDNLLIADIE----LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMR 385
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGE 225
E ++ ++D+ IV+L Q E L L+ME GG + L+ +++ + + +
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQ 444
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HR++ N+LL + K+SDFGL K L
Sbjct: 445 VSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 57/248 (22%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G GEV R + G A+K LK R Q +E +++ + D I+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSEASIMGQFDHPNII 113
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKH---- 236
+L ++ EY+ G + T L D +F + + V + +
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD------GQFTIMQLVGMLRGVGAGMRYL 167
Query: 237 ---NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
Y+HRD+ N+L+D N K+SDFGL + L+ + A + G
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE------------DDPDAAXTTTGGK 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 353
+ R T APE + + + D WS G +M+E+L
Sbjct: 216 IPIRWT--------------------------APEAIAFRTFSSASDVWSFGVVMWEVLA 249
Query: 354 -GYPPFYS 360
G P+++
Sbjct: 250 YGERPYWN 257
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 141
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 142 LAARNCLVGENHLVKVADFGLSR 164
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 140
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 141 LAARNCLVGENHLVKVADFGLSR 163
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 62/243 (25%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FGEV + V A+K LK M E E ++ ++ + +V+LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKV-AIKTLKPGTM----SPESFLEEAQIMKKLKHDKLVQLY- 70
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL-------MRKDTLTEEEARFYVGETVLAIESIHKHN 237
+ +E +Y++ EY+ G ++ L ++ L + A+ G + I + N
Sbjct: 71 AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG-----MAYIERMN 125
Query: 238 YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPR 297
YIHRD++ N+L+ K++DFGL + ++ N A Q P+
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIE------------DNEXTARQGAKFPI--- 170
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML----V 353
+ APE L + ++ D WS G ++ E++ V
Sbjct: 171 -------------------------KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
Query: 354 GYP 356
YP
Sbjct: 206 PYP 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 55/247 (22%)
Query: 124 MIGKGAFGEVRVCREKATG---HVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G FGEV R KA G A+K LK R Q +E +++ + + I+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER--QRREFLSEASIMGQFEHPNII 80
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH------ 234
+L + + ++ E++ G + + L D +F V + V + I
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLND------GQFTVIQLVGMLRGIASGMRYL 134
Query: 235 -KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+ +Y+HRD+ N+L++ N K+SDFGL + L+ ++ D + S+L G +
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS---SDPTETSSLGGKI------ 185
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 352
P R + APE + + + D WS G +M+E++
Sbjct: 186 --PIR-------------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
Query: 353 VGYPPFY 359
G P++
Sbjct: 219 FGERPYW 225
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 108/280 (38%), Gaps = 51/280 (18%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V R + G A+K L + + +V E ++ + IV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQD-FHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMR---KDTLTEEEARFYVGETVLAIESIHKHN--YI 239
+ L ++ EYL G + LL + ++ L E + + +H N +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRT 299
HR++K NLL+D+ +K+ DFGL S L+ F
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGL------SRLKASTF---------------------- 193
Query: 300 QQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFY 359
+ + S GTP+++APEVL + + D +S G I++E+ P+
Sbjct: 194 -------------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240
Query: 360 SDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCN 399
+ P + L+ P L+P+ +I N
Sbjct: 241 NLNPAQVVAAVGFKCKRLEIPR--NLNPQVAAIIEGCWTN 278
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSR 161
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR 159
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 149
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 150 LAARNCLVGENHLVKVADFGLSR 172
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 138
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 139 LAARNCLVGENHLVKVADFGLSR 161
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 95/236 (40%), Gaps = 46/236 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEVDSNCIVKLY 183
+G+G FG V + A+KKL + ++ + E ++A+ +V+L
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL--TEEEARFYVGETVL-AIESIHKHNYIH 240
D + L L+ Y+P G ++ L D R + + I +H++++IH
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
RDIK N+LLD K+SDFGL R
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLA---------------------------------RAS 183
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
++ Q +R VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 184 EKFAQTVMXSR------IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHRD
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRD 136
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 137 LAARNCLVGENHLVKVADFGLSR 159
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + ++ + + A+E + K N+IHR+
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 344 LAARNCLVGENHLVKVADFGLSR 366
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 191 YLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG---ETVLAIESIHKHNYIHRDIKPDN 247
YLY+ M+ ++ + R+ +L + E + + A+E +H +HRD+KP N
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 248 LLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHW 307
+ + +K+ DFGL +D E++ ++ + + G+
Sbjct: 195 IFFTMDDVVKVGDFGLVTAMDQD---EEEQTVLTPMPAYATHXGQ--------------- 236
Query: 308 QRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTC 367
VGT Y++PE + Y + D +SLG I++E+L + M
Sbjct: 237 -----------VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF-----STQMERV 280
Query: 368 RKIVNWRTHLKFP 380
R I + R +LKFP
Sbjct: 281 RIITDVR-NLKFP 292
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLK--KSEMLRRGQVEHVKAERNLLAEVD 175
DFEP+ +G+G FG V + K YA+K+++ E+ R + VKA LA+++
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKA----LAKLE 62
Query: 176 SNCIVKLY 183
IV+ +
Sbjct: 63 HPGIVRYF 70
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 127/312 (40%), Gaps = 82/312 (26%)
Query: 167 ERNLLAEVDSN-CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF---- 221
E LL E D + +++ YCS D +LY+ +E L ++ L+ K+ +++E +
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKN-VSDENLKLQKEY 115
Query: 222 ----YVGETVLAIESIHKHNYIHRDIKPDNLLLD-------------RNGHMKLSDFGLC 264
+ + + +H IHRD+KP N+L+ N + +SDFGLC
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 265 KPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDY 324
K LD SG Q R + GT +
Sbjct: 176 KKLD---------------SG----------------------QXXFRXNLNNPSGTSGW 198
Query: 325 IAPEVL-------LKKGYGMECDWWSLGAIMYEMLV-GYPPF---YSDEPMSTCRKIVNW 373
APE+L K+ D +S+G + Y +L G PF YS E + R I +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES-NIIRGIFSL 257
Query: 374 RTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAF 433
+K + L EA DLIS+++ + L A ++ HP F W K K F
Sbjct: 258 -DEMKCLHDRSLIAEATDLISQMIDH--DPLKRPTAMKVLRHPLF----WPK--SKKLEF 308
Query: 434 IPEVNDELDTQN 445
+ +V+D L+ +N
Sbjct: 309 LLKVSDRLEIEN 320
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 46/236 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEVDSNCIVKLY 183
+G+G FG V + A+KKL + ++ + E ++A+ +V+L
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL--TEEEARFYVGETVL-AIESIHKHNYIH 240
D + L L+ Y+P G ++ L D R + + I +H++++IH
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
RDIK N+LLD K+SDFGL + A +
Sbjct: 157 RDIKSANILLDEAFTAKISDFGLAR-----------------------------ASEKFA 187
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
Q ++ VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 188 Q----------TVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLD-R 252
L+ EY+ D L LT+ + RFY+ E + A++ H +HRD+KP N+++D +
Sbjct: 112 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
++L D+GL + + QE + + S + S + S G +A
Sbjct: 169 QKKLRLIDWGLAEFYHPA--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 226
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
++E H Q N L V + K G E L + + + P
Sbjct: 227 IFRREPFFHGQDNYDQL--------------VRIAKVLGTE----ELYGYLKKYHIDLDP 268
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHP 416
++D RK W + +SPEA DL+ KLL + +QRL K A E HP
Sbjct: 269 HFNDILGQHSRK--RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME---HP 323
Query: 417 WF 418
+F
Sbjct: 324 YF 325
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 94/236 (39%), Gaps = 46/236 (19%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNLLAEVDSNCIVKLY 183
+G+G FG V + A+KKL + ++ + E ++A+ +V+L
Sbjct: 33 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 184 CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL--TEEEARFYVGETVL-AIESIHKHNYIH 240
D + L L+ Y+P G ++ L D R + + I +H++++IH
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
RDIK N+LLD K+SDFGL R
Sbjct: 151 RDIKSANILLDEAFTAKISDFGLA---------------------------------RAS 177
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
++ Q R VGT Y+APE L+ + D +S G ++ E++ G P
Sbjct: 178 EKFAQXVMXXR------IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHR+
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 340
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 341 LAARNCLVGENHLVKVADFGLSR 363
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G +GEV K A+K LK+ M +VE E ++ E+ +V+L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+ Y+I E++ G+++ L + + + + A+E + K N+IHR+
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRN 382
Query: 243 IKPDNLLLDRNGHMKLSDFGLCK 265
+ N L+ N +K++DFGL +
Sbjct: 383 LAARNCLVGENHLVKVADFGLSR 405
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLD-R 252
L+ EY+ D L LT+ + RFY+ E + A++ H +HRD+KP N+++D +
Sbjct: 117 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
++L D+GL + + QE + + S + S + S G +A
Sbjct: 174 QKKLRLIDWGLAEFYHPA--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 231
Query: 298 RTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPP 357
++E H Q N L V + K G E L + + + P
Sbjct: 232 IFRREPFFHGQDNYDQL--------------VRIAKVLGTE----ELYGYLKKYHIDLDP 273
Query: 358 FYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADEIKAHP 416
++D RK W + +SPEA DL+ KLL + +QRL K A E HP
Sbjct: 274 HFNDILGQHSRK--RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME---HP 328
Query: 417 WF 418
+F
Sbjct: 329 YF 330
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 31/173 (17%)
Query: 117 DDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAE-RNLLAEVD 175
+D + +IG+G FG+V R K G L+ ++R + K + R+ E++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELE 74
Query: 176 SNC-------IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------D 212
C I+ L + + YLYL +EY P G+++ L +
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 213 TLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
TL+ ++ + + ++ + + +IHR++ N+L+ N K++DFGL +
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 8/150 (5%)
Query: 118 DFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
D L +G G FG V+ + + V A+K +K+ M +E K NL E
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 65
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDTLTEEEARFYVGETVLAIESIHK 235
+V+LY +++I EY+ G ++ L MR T++ + A+E +
Sbjct: 66 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 236 HNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
++HRD+ N L++ G +K+SDFGL +
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 41/250 (16%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DSNCIV 180
L IGKG FG+V + + G+ A+K +K + AE +++ ++ SN +
Sbjct: 11 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQ 63
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNY 238
L ++ LY++ EY+ G ++ L + L + + + A+E + +N+
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 123
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSN--------------LQEKDFSIGSN-- 282
+HRD+ N+L+ + K+SDFGL K + L+EK FS S+
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 283 ----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME 338
L + S GR PR ++ + ++ +M A PD P V Y +
Sbjct: 184 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA------PDGCPPAV-----YEVM 232
Query: 339 CDWWSLGAIM 348
+ W L A M
Sbjct: 233 KNCWHLDAAM 242
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 57/247 (23%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G FGEV R K G A+K LK + Q +E +++ + D I+
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 78
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI------- 233
L + + +I EY+ G + L + D RF V + V + I
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 132
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+Y+HRD+ N+L++ N K+SDFG+ + L+ + A + G
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE------------DDPEAAYTTRGGK 180
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 352
+ R T APE + + + D WS G +M+E++
Sbjct: 181 IPIRWT--------------------------APEAIAYRKFTSASDVWSYGIVMWEVMS 214
Query: 353 VGYPPFY 359
G P++
Sbjct: 215 YGERPYW 221
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 41/250 (16%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DSNCIV 180
L IGKG FG+V + + G+ A+K +K + AE +++ ++ SN +
Sbjct: 26 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQ 78
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNY 238
L ++ LY++ EY+ G ++ L + L + + + A+E + +N+
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSN--------------LQEKDFSIGSN-- 282
+HRD+ N+L+ + K+SDFGL K + L+EK FS S+
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 283 ----LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGME 338
L + S GR PR ++ + ++ +M A PD P V Y +
Sbjct: 199 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA------PDGCPPAV-----YEVM 247
Query: 339 CDWWSLGAIM 348
+ W L A M
Sbjct: 248 KNCWHLDAAM 257
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 58/242 (23%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DSNCIV 180
L IGKG FG+V + + G+ A+K +K + AE +++ ++ SN +
Sbjct: 198 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQ 250
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNY 238
L ++ LY++ EY+ G ++ L + L + + + A+E + +N+
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 310
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+ N+L+ + K+SDFGL K + S+ Q+ +G L PV
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD---------TGKL-----PV---- 350
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML----VG 354
+ APE L +K + + D WS G +++E+ V
Sbjct: 351 ------------------------KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
Query: 355 YP 356
YP
Sbjct: 387 YP 388
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 60/241 (24%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
+IG G FGEV R K G A+K LK +E RR + E +++ + D
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 84
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I+ L + + ++ EY+ G + T L + D +F V + V + I
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND------GQFTVIQLVGMLRGISAGMK 138
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
Y+HRD+ N+L++ N K+SDFGL + L+ + A + G
Sbjct: 139 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE------------DDPEAAYTTRG 186
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+ R T APE + + + D WS G +M+E+
Sbjct: 187 GKIPIRWT--------------------------APEAIAFRKFTSASDVWSYGIVMWEV 220
Query: 352 L 352
+
Sbjct: 221 V 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 138/352 (39%), Gaps = 80/352 (22%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+G F P ++G GA G + V R A+K++ E LL E
Sbjct: 21 VGKISFCPKDVLGHGAEGTI-VYRGMFDNRDVAVKRILPECF------SFADREVQLLRE 73
Query: 174 VDSN-CIVKLYCSFQDDEYLYL--------IMEYLPGGDMMTLLMRKDTLTEEEARFYVG 224
D + +++ +C+ +D ++ Y+ + EY+ D L + TL ++
Sbjct: 74 SDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ------- 126
Query: 225 ETVLAIESIHKHNYIHRDIKPDNLLLDR-NGHMK----LSDFGLCKPLDCSNLQEKDFSI 279
T + +H N +HRD+KP N+L+ N H K +SDFGLCK L
Sbjct: 127 -TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL------------ 173
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL---LKKGYG 336
+ GR RR+ GT +IAPE+L K+
Sbjct: 174 ---------AVGRHSFSRRS-----------------GVPGTEGWIAPEMLSEDCKENPT 207
Query: 337 MECDWWSLGAIMYEMLV-GYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISK 395
D +S G + Y ++ G PF + PE+ + A++LI K
Sbjct: 208 YTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE-DVIARELIEK 266
Query: 396 LLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQIKAAFIPEVNDELDTQNFE 447
++ Q+ A + HP+F W Q++ F +V+D ++ ++ +
Sbjct: 267 MIAMDPQK--RPSAKHVLKHPFF----WSLEKQLQ--FFQDVSDRIEKESLD 310
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 57/247 (23%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G FGEV R K G A+K LK + Q +E +++ + D I+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 72
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI------- 233
L + + +I EY+ G + L + D RF V + V + I
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 126
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+Y+HRD+ N+L++ N K+SDFG+ + L+ + A + G
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE------------DDPEAAYTTRGGK 174
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 352
+ R T APE + + + D WS G +M+E++
Sbjct: 175 IPIRWT--------------------------APEAIAYRKFTSASDVWSYGIVMWEVMS 208
Query: 353 VGYPPFY 359
G P++
Sbjct: 209 YGERPYW 215
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 140/333 (42%), Gaps = 70/333 (21%)
Query: 117 DDFEPLTMIGKGAFGEVR-----VCREKATGHVYAMKKLKKSEMLRRGQV-EHVKAERNL 170
DD++ + +G+G + EV EK V +K +KK+++ R ++ E+++ N+
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVV--VKILKPVKKNKIKREIKILENLRGGPNI 94
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAI 230
+ D IVK S L+ E++ D L TLT+ + RFY+ E + A+
Sbjct: 95 ITLAD---IVKDPVSRTPA----LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKAL 144
Query: 231 ESIHKHNYIHRDIKPDNLLLDR-NGHMKLSDFGLCKPLDCSNLQEKDFSIGS-------- 281
+ H +HRD+KP N+++D + ++L D+GL + QE + + S
Sbjct: 145 DYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPEL 202
Query: 282 -------NLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEV 329
+ S + S G +A ++E H N L +GT DYI
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI---- 258
Query: 330 LLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEA 389
Y +E D P ++D RK W + + +SPEA
Sbjct: 259 ---DKYNIELD----------------PRFNDILGRHSRK--RWERFVHSENQHLVSPEA 297
Query: 390 KDLISKLL-CNVEQRLGTKGADEIKAHPWFKGI 421
D + KLL + + RL + A E HP+F +
Sbjct: 298 LDFLDKLLRYDHQSRLTAREAME---HPYFYTV 327
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 20 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 74
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + + +T ++ +H + IHRD+
Sbjct: 75 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 134
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 169
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ + Y + D ++ G ++YE++ G P+
Sbjct: 170 LS--------------GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 58/241 (24%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
+IG G FGEV K G A+K LK +E RR + +E +++ + D
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFL----SEASIMGQFDHPN 95
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
++ L + +I E++ G + + L + D +F V + V + I
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND------GQFTVIQLVGMLRGIAAGMK 149
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
NY+HRD+ N+L++ N K+SDFGL + L+ D + S L G +
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT---SDPTYTSALGGKI---- 202
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
P R + APE + + + D WS G +M+E+
Sbjct: 203 ----PIR-------------------------WTAPEAIQYRKFTSASDVWSYGIVMWEV 233
Query: 352 L 352
+
Sbjct: 234 M 234
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMK----KLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
IG G+FG++ + + A G A+K K K ++ H++++ + +
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKMMQGGVGIPT 69
Query: 181 KLYCSFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+C + D Y ++ME L D+ RK +L + + + IE IH N+
Sbjct: 70 IRWCGAEGD-YNVMVMELLGPSLEDLFNFCSRKFSL--KTVLLLADQMISRIEYIHSKNF 126
Query: 239 IHRDIKPDNLL--LDRNGHM-KLSDFGLCKPL-DCSNLQEKDFSIGSNLSGA 286
IHRD+KPDN L L + G++ + DFGL K D Q + NL+G
Sbjct: 127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 71/265 (26%)
Query: 125 IGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKA----ERNLLAEVDSNCI 179
IG+GAFG RV + +A G + Y + +ML+ ++A E L+AE D+ I
Sbjct: 55 IGEGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL--MRKDT----------------------LT 215
VKL + + L+ EY+ GD+ L M T L+
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 216 EEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEK 275
E + + + + ++HRD+ N L+ N +K++DFGL + N+
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR-----NIYSA 227
Query: 276 DFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGY 335
D+ ++DG P R ++ PE + Y
Sbjct: 228 DY---------YKADGNDAIPIR-------------------------WMPPESIFYNRY 253
Query: 336 GMECDWWSLGAIMYEML-VGYPPFY 359
E D W+ G +++E+ G P+Y
Sbjct: 254 TTESDVWAYGVVLWEIFSYGLQPYY 278
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 52/238 (21%)
Query: 126 GKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC----IVK 181
G+G FG V + A+KKL + E +K + + +V + C +V+
Sbjct: 31 GEGGFGVVY--KGYVNNTTVAVKKLA---AMVDITTEELKQQFDQEIKVXAKCQHENLVE 85
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL--TEEEARFYVGETVL-AIESIHKHNY 238
L D + L L+ Y P G ++ L D R + + I +H++++
Sbjct: 86 LLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH 145
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
IHRDIK N+LLD K+SDFGL R
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLA---------------------------------R 172
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYP 356
++ Q +R VGT Y APE L+ + D +S G ++ E++ G P
Sbjct: 173 ASEKFAQXVXXSR------IVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 66/257 (25%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G GAFG+V + +E A V A+K LK + + E + +E +++ + +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTA--HADEKEALMSELKIMSHLGQHE 110
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-------- 229
IV L + + +I EY GD++ L RK + E + F + + L+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 230 ------IESIHKHNYIHRDIKPDNLLLDRNGHM-KLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ + N IHRD+ N+LL NGH+ K+ DFGL + + + + ++ + N
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDI----MNDSNYIVKGN 225
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
PV ++APE + Y ++ D W
Sbjct: 226 AR-------LPV----------------------------KWMAPESIFDCVYTVQSDVW 250
Query: 343 SLGAIMYEML-VGYPPF 358
S G +++E+ +G P+
Sbjct: 251 SYGILLWEIFSLGLNPY 267
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMK----KLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
IG G+FG++ + + A G A+K K K ++ H++++ + +
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKMMQGGVGIPT 67
Query: 181 KLYCSFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+C + D Y ++ME L D+ RK +L + + + IE IH N+
Sbjct: 68 IRWCGAEGD-YNVMVMELLGPSLEDLFNFCSRKFSL--KTVLLLADQMISRIEYIHSKNF 124
Query: 239 IHRDIKPDNLL--LDRNGHM-KLSDFGLCKPL-DCSNLQEKDFSIGSNLSGA 286
IHRD+KPDN L L + G++ + DFGL K D Q + NL+G
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 61/301 (20%)
Query: 124 MIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLR-RGQVEHVKAERNLLAEVDSNCIVKL 182
++ +G F V ++ +G YA+K+L +E + R ++ V + L + IV+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN---IVQ- 90
Query: 183 YCSFQD--------DEYLYLIMEYLPGGDMMTLLMRKDT---LTEEEARFYVGETVLAIE 231
+CS + +L++ L G ++ L + ++ L+ + +T A++
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 232 SIHKHN--YIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQS 289
+H+ IHRD+K +NLLL G +KL DFG + D+S
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS----HYPDYS----------- 195
Query: 290 DGRPVAPRRTQQEQLQHWQRNRRMLAYSTV---GTPDYIAPEVL-LKKGY--GMECDWWS 343
W RR L + TP Y PE++ L + G + D W+
Sbjct: 196 -----------------WSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWA 238
Query: 344 LGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQR 403
LG I+Y + PF + +IVN + + P + + + + + L N E+R
Sbjct: 239 LGCILYLLCFRQHPFEDGAKL----RIVNGKYSIP-PHDTQYTVFHSLIRAMLQVNPEER 293
Query: 404 L 404
L
Sbjct: 294 L 294
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 54/233 (23%)
Query: 122 LTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DSNCIV 180
L IGKG FG+V + + G+ A+K +K + AE +++ ++ SN +
Sbjct: 17 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQ 69
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK--DTLTEEEARFYVGETVLAIESIHKHNY 238
L ++ LY++ EY+ G ++ L + L + + + A+E + +N+
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 129
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
+HRD+ N+L+ + K+SDFGL K + S+ Q+ +G L PV
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD---------TGKL-----PV---- 169
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
+ APE L + + + D WS G +++E+
Sbjct: 170 ------------------------KWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 32 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 86
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + + +T ++ +H + IHRD+
Sbjct: 87 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL EK GS+ Q EQ
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLAT--------EKSRWSGSH-----------------QFEQ 181
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ + Y + D ++ G ++YE++ G P+
Sbjct: 182 LS--------------GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 55/255 (21%)
Query: 115 GADDFE----PLTM---IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAE 167
ADD+E +T+ IG G+FG V + K G V A+K L + + Q++ K E
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNE 70
Query: 168 RNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ET 226
+L + I+ L+ + L ++ ++ G + L +T E + + +T
Sbjct: 71 VGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 227 VLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
++ +H + IHRD+K +N+ L + +K+ DFGL EK GS+
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--------EKSRWSGSH---- 177
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWS 343
Q EQL G+ ++APEV+ + Y + D ++
Sbjct: 178 -------------QFEQLS--------------GSILWMAPEVIRMQDSNPYSFQSDVYA 210
Query: 344 LGAIMYEMLVGYPPF 358
G ++YE++ G P+
Sbjct: 211 FGIVLYELMTGQLPY 225
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 44/217 (20%)
Query: 192 LYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLD 251
LYL+ E + + ++ ++ + ++++ +L + +H+ +HRD+ P N+LL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 252 RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNR 311
N + + DF NL +D T H+ +R
Sbjct: 169 DNNDITICDF---------NLARED----------------------TADANKTHYVTHR 197
Query: 312 RMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI 370
Y APE++++ KG+ D WS G +M EM F + KI
Sbjct: 198 W-----------YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246
Query: 371 VNWRTHLKFPEEAKL-SPEAKDLISKLLCNVEQRLGT 406
V K + SP A+D + L NV R T
Sbjct: 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT 283
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 52/242 (21%)
Query: 123 TMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEV--DSNCIV 180
T IG G+FG V + K G V A+K LK + E +A RN +A + + +
Sbjct: 42 TRIGSGSFGTV--YKGKWHGDV-AVKILKVVD----PTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYI 239
L+ + + L ++ ++ G + L ++T + + +T ++ +H N I
Sbjct: 95 LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNII 154
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRT 299
HRD+K +N+ L +K+ DFGL ++ S SG+ Q +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLA-------------TVKSRWSGSQQVE--------- 192
Query: 300 QQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG---YGMECDWWSLGAIMYEMLVGYP 356
G+ ++APEV+ + + + D +S G ++YE++ G
Sbjct: 193 -----------------QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
Query: 357 PF 358
P+
Sbjct: 236 PY 237
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 44/217 (20%)
Query: 192 LYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLD 251
LYL+ E + + ++ ++ + ++++ +L + +H+ +HRD+ P N+LL
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 252 RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNR 311
N + + DF NL +D T H+ +R
Sbjct: 169 DNNDITICDF---------NLARED----------------------TADANKTHYVTHR 197
Query: 312 RMLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKI 370
Y APE++++ KG+ D WS G +M EM F + KI
Sbjct: 198 W-----------YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246
Query: 371 VNWRTHLKFPEEAKL-SPEAKDLISKLLCNVEQRLGT 406
V K + SP A+D + L NV R T
Sbjct: 247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWT 283
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMK----KLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
IG G+FG++ + A+G A+K K K ++ H++++ + +
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQL-------HIESKFYKMMQGGVGIPS 69
Query: 181 KLYCSFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+C + D Y ++ME L D+ RK +L + + + IE IH N+
Sbjct: 70 IKWCGAEGD-YNVMVMELLGPSLEDLFNFCSRKFSL--KTVLLLADQMISRIEYIHSKNF 126
Query: 239 IHRDIKPDNLL--LDRNGHM-KLSDFGLCKPL-DCSNLQEKDFSIGSNLSGA 286
IHRD+KPDN L L + G++ + DFGL K D Q + NL+G
Sbjct: 127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 178
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 63/255 (24%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNC 178
+G+GAFG+V +C E+ V A+K LK + R H +AE LL +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILV-AVKTLKDASDNARKDF-HREAE--LLTNLQHEH 76
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMM---------TLLMRKDT----LTEEEARFYVGE 225
IVK Y + + L ++ EY+ GD+ +LM + LT+ + +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSG 285
+ + +++HRD+ N L+ N +K+ DFG+ + + ++ + +G
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY----YRVG----- 187
Query: 286 ALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLG 345
G + P R ++ PE ++ + + E D WSLG
Sbjct: 188 -----GHTMLPIR-------------------------WMPPESIMYRKFTTESDVWSLG 217
Query: 346 AIMYEMLV-GYPPFY 359
+++E+ G P+Y
Sbjct: 218 VVLWEIFTYGKQPWY 232
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
+G G FG V++ + K V A+K +K+ M + E + ++ +VK Y
Sbjct: 16 LGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSE----DEFFQEAQTMMKLSHPKLVKFYG 70
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEE----EARFYVGETVLAIESIHKHNYIH 240
+ +Y++ EY+ G ++ L E E + V E + +ES H +IH
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIH 127
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCK 265
RD+ N L+DR+ +K+SDFG+ +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE 198
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 78
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 132
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 47/188 (25%)
Query: 189 DEYLYLIMEYLPGG---DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKP 245
++YL +IMEY+P + + + ++ Y+ + A+ IH HRDIKP
Sbjct: 110 NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169
Query: 246 DNLLLD-RNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQL 304
NLL++ ++ +KL DFG K L P P
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKL------------------------IPSEP-------- 197
Query: 305 QHWQRNRRMLAYSTVGTPDYIAPEVLLKKG-YGMECDWWSLGAIMYEMLVGYPPFYSDEP 363
+ + + + Y APE++L Y D WS+G + E+++G P F +
Sbjct: 198 ----------SVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 364 MSTCRKIV 371
+ +I+
Sbjct: 248 IDQLVRII 255
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 95
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 149
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 150 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 186
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 57/247 (23%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G FGEV R K G A+K LK + Q +E +++ + D I+
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 93
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESI------- 233
L + + +I EY+ G + L + D RF V + V + I
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 147
Query: 234 HKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
+ +HRD+ N+L++ N K+SDFG+ + L+ + A + G
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE------------DDPEAAYTTRGGK 195
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML- 352
+ R T APE + + + D WS G +M+E++
Sbjct: 196 IPIRWT--------------------------APEAIAYRKFTSASDVWSYGIVMWEVMS 229
Query: 353 VGYPPFY 359
G P++
Sbjct: 230 YGERPYW 236
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 105
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 159
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 160 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 196
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 20/171 (11%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMK----KLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
IG G+FGE+ + T A+K K K ++L ++ + + V +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGV- 73
Query: 181 KLYCSFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+ +Y L+M+ L D+ RK L+ + + + +E +H ++
Sbjct: 74 -------EGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSF 124
Query: 239 IHRDIKPDNLLLD---RNGHMKLSDFGLCKPL-DCSNLQEKDFSIGSNLSG 285
+HRDIKPDN L+ R + + DFGL K D S Q + NL+G
Sbjct: 125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 60/248 (24%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKL------KKSEMLRRGQVEHVKAERNLLAEVDSNC 178
IGKG FG V R V A+K L ++EM+ + Q + E +++ ++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ--EFQREVFIMSNLNHPN 84
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF-YVGETVLAIESIHKHN 237
IVKLY + ++ME++P GD+ L+ K + + + + L IE + N
Sbjct: 85 IVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 238 --YIHRDIKPDNLL---LDRNGHM--KLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+HRD++ N+ LD N + K++DFGL Q+ S+ S L G Q
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--------QQSVHSV-SGLLGNFQ-- 191
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
W +A T+G + + Y + D +S I+Y
Sbjct: 192 ----------------W------MAPETIGAEE---------ESYTEKADTYSFAMILYT 220
Query: 351 MLVGYPPF 358
+L G PF
Sbjct: 221 ILTGEGPF 228
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 43 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 97
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 98 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 157
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 192
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 193 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 66/257 (25%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G GAFG+V + +E A V A+K LK + + E + +E +++ + +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTA--HADEKEALMSELKIMSHLGQHE 110
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLA-------- 229
IV L + + +I EY GD++ L RK + E + F + + +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170
Query: 230 ------IESIHKHNYIHRDIKPDNLLLDRNGHM-KLSDFGLCKPLDCSNLQEKDFSIGSN 282
+ + N IHRD+ N+LL NGH+ K+ DFGL + + + + ++ + N
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDI----MNDSNYIVKGN 225
Query: 283 LSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWW 342
PV ++APE + Y ++ D W
Sbjct: 226 AR-------LPV----------------------------KWMAPESIFDCVYTVQSDVW 250
Query: 343 SLGAIMYEML-VGYPPF 358
S G +++E+ +G P+
Sbjct: 251 SYGILLWEIFSLGLNPY 267
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 193 YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR 252
+L+ME LPG + +L + + E+ +G + ++ ++ K + H D++P N+++D
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREK---ILGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 253 NGHMKLSDFG--LCKPLDCS 270
H +L DFG + P DCS
Sbjct: 375 RQHARLIDFGSIVTTPQDCS 394
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + D +N+ D+ +
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR--DINNI---DYYKNT 216
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 217 -------TNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 18 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 72
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 73 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 132
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 167
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 168 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 193 YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR 252
+L+ME LPG + +L + + E+ +G + ++ ++ K + H D++P N+++D
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREK---ILGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 253 NGHMKLSDFG--LCKPLDCS 270
H +L DFG + P DCS
Sbjct: 375 RQHARLIDFGSIVTTPQDCS 394
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 44 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 98
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 193
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 194 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 21 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 75
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 170
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 171 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 40/184 (21%)
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNY 238
+V ++ + D LY+ + G D+ L R+ L A V + A+++ H
Sbjct: 96 VVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA 155
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRR 298
HRD+KP+N+L+ + L DFG+ + EK +G
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIAS----ATTDEKLTQLG------------------ 193
Query: 299 TQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPF 358
+TVGT Y APE + D ++L ++YE L G PP+
Sbjct: 194 ------------------NTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
Query: 359 YSDE 362
D+
Sbjct: 236 QGDQ 239
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 21 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 75
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 170
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 171 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 16 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 165
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 166 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 98/252 (38%), Gaps = 37/252 (14%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DS 176
+E + +G+G FG+V C + A G A+K ++ R E + E N+L ++ +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR----EAARLEINVLKKIKEK 76
Query: 177 NCIVKLYCSFQDDEYLY----LIMEYLPGGDMMTLLMRKD--TLTEEEARFYVGETVLAI 230
+ K C D + + I L G + L + R + A+
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 136
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+H++ H D+KP+N+L + L + + C K+ SI G+ D
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYN----EHKSCEEKSVKNTSIRVADFGSATFD 192
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
+ V T Y PEV+L+ G+ CD WS+G I++E
Sbjct: 193 HEHHT---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
Query: 351 MLVGYPPFYSDE 362
G+ F + E
Sbjct: 232 YYRGFTLFQTHE 243
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 16 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL ++ S SG+ Q EQ
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA-------------TVKSRWSGS------------HQFEQ 165
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 166 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 64/257 (24%)
Query: 125 IGKGAFGEVRV--CREKATGH---VYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+GAFG+V + C + + A+K LK + R + + E LL + I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR---KDFQREAELLTNLQHEHI 79
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD----TLTEEEARFYVGET----VLAIE 231
VK Y D + L ++ EY+ GD+ L L + + R GE +L I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 232 S--------IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
S + +++HRD+ N L+ N +K+ DFG+ + + ++ + +G
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY----YRVG--- 192
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
G + P R ++ PE ++ + + E D WS
Sbjct: 193 -------GHTMLPIR-------------------------WMPPESIMYRKFTTESDVWS 220
Query: 344 LGAIMYEMLV-GYPPFY 359
G I++E+ G P++
Sbjct: 221 FGVILWEIFTYGKQPWF 237
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 98/252 (38%), Gaps = 37/252 (14%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DS 176
+E + +G+G FG+V C + A G A+K ++ R E + E N+L ++ +
Sbjct: 30 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR----EAARLEINVLKKIKEK 85
Query: 177 NCIVKLYCSFQDDEYLY----LIMEYLPGGDMMTLLMRKDT--LTEEEARFYVGETVLAI 230
+ K C D + + I L G + L + R + A+
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 145
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+H++ H D+KP+N+L + L + + C K+ SI G+ D
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYN----EHKSCEEKSVKNTSIRVADFGSATFD 201
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
+ V T Y PEV+L+ G+ CD WS+G I++E
Sbjct: 202 HEHHT---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
Query: 351 MLVGYPPFYSDE 362
G+ F + E
Sbjct: 241 YYRGFTLFQTHE 252
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ EY+ G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
++HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 55/262 (20%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 107 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 163
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 164 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 217
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 218 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 267
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 268 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 313
Query: 412 IKAHPWFKGIEWDKLYQIKAAF 433
HP+F+ + + + +A F
Sbjct: 314 AMTHPYFQQVRAAENSRTRAEF 335
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N M+++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 105/273 (38%), Gaps = 72/273 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 92
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL--------------MRKDTLTEEEARF 221
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
Y + +E + IHRD+ N+LL +K+ DFGL + I
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR------------DIXK 200
Query: 282 NLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDW 341
+ + D R P + ++APE + + Y ++ D
Sbjct: 201 DPDXVRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQSDV 233
Query: 342 WSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
WS G +++E+ +G YP DE CR++
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 264
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEE-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQR-HKMGADDFEPLTMIGKGAFGEVR---VCREKATG 142
VS E ++ + +++++T M R +++ + E IG+G FG+V +
Sbjct: 359 VSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA 418
Query: 143 HVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLP 200
A+K K S+ +R E E + + D IVKL ++ +++IME
Sbjct: 419 MAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCT 473
Query: 201 GGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
G++ + L +RK +L Y + A+ + ++HRDI N+L+ N +KL
Sbjct: 474 LGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 533
Query: 260 DFGLCKPLDCSN 271
DFGL + ++ S
Sbjct: 534 DFGLSRYMEDST 545
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 163 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 216
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 217 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 266
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 267 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 312
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 313 AMTHPYFQQV 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 216 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 265
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 266 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 311
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 312 AMTHPYFQQV 321
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 98/252 (38%), Gaps = 37/252 (14%)
Query: 119 FEPLTMIGKGAFGEVRVCREKATGHV-YAMKKLKKSEMLRRGQVEHVKAERNLLAEV-DS 176
+E + +G+G FG+V C + A G A+K ++ R E + E N+L ++ +
Sbjct: 53 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR----EAARLEINVLKKIKEK 108
Query: 177 NCIVKLYCSFQDDEYLY----LIMEYLPGGDMMTLLMRKDT--LTEEEARFYVGETVLAI 230
+ K C D + + I L G + L + R + A+
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 168
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+H++ H D+KP+N+L + L + + C K+ SI G+ D
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYN----EHKSCEEKSVKNTSIRVADFGSATFD 224
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
+ V T Y PEV+L+ G+ CD WS+G I++E
Sbjct: 225 HEHHT---------------------TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
Query: 351 MLVGYPPFYSDE 362
G+ F + E
Sbjct: 264 YYRGFTLFQTHE 275
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 65/256 (25%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 90
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL------------MRKDTLTEEEARFYV 223
N + L + L +I+E+ G++ T L + KD LT E Y
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI----YKDPDY------ 200
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
+ D R P + ++APE + + Y ++ D WS
Sbjct: 201 --VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQSDVWS 231
Query: 344 LGAIMYEML-VGYPPF 358
G +++E+ +G P+
Sbjct: 232 FGVLLWEIFSLGASPY 247
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 216 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 265
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 266 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 311
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 312 AMTHPYFQQV 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 216 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 265
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 266 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 311
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 312 AMTHPYFQQV 321
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 59/249 (23%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
+IG G FGEV K G A+K LK +E RR + +E +++ + D
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFL----SEASIMGQFDHPN 69
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
++ L + +I E++ G + + L + D +F V + V + I
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND------GQFTVIQLVGMLRGIAAGMK 123
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDG 291
NY+HR + N+L++ N K+SDFGL + L+ D + S L G +
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT---SDPTYTSALGGKI---- 176
Query: 292 RPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
P R + APE + + + D WS G +M+E+
Sbjct: 177 ----PIR-------------------------WTAPEAIQYRKFTSASDVWSYGIVMWEV 207
Query: 352 L-VGYPPFY 359
+ G P++
Sbjct: 208 MSYGERPYW 216
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 216 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 265
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 266 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 311
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 312 AMTHPYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 216 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 265
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 266 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 311
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 312 AMTHPYFQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 105 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 162 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 215
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 216 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 265
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 266 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 311
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 312 AMTHPYFQQV 321
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 56/247 (22%)
Query: 124 MIGKGAFGEVRVCREKATG---HVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
+IG G FGEV K + V K K+ + +V+ + E ++ + + I+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFL-GEAGIMGQFSHHNII 109
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIH------ 234
+L + + +I EY+ G + L KD F V + V + I
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKD------GEFSVLQLVGMLRGIAAGMKYL 163
Query: 235 -KHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRP 293
NY+HRD+ N+L++ N K+SDFGL + L+ + + G
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE------------DDPEATYTTSGGK 211
Query: 294 VAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV 353
+ R T APE + + + D WS G +M+E++
Sbjct: 212 IPIRWT--------------------------APEAISYRKFTSASDVWSFGIVMWEVMT 245
Query: 354 -GYPPFY 359
G P++
Sbjct: 246 YGERPYW 252
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 477
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 106 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 254 GH-MKLSDFGLCK-------------------PLDCSNLQEKDFSIGSNLSGALQSDGRP 293
++L D+GL + P +LQ+ D+S+ + S G
Sbjct: 163 LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLD------MWSLGCM 216
Query: 294 VAPRRTQQEQLQHWQRNRRMLA--YSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEM 351
A ++E + N L +GT V L K Y +E D E
Sbjct: 217 FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTD---GLNVYLNK-YRIELD------PQLEA 266
Query: 352 LVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADE 411
LVG +S +P W + + +SPEA D + KLL Q T A E
Sbjct: 267 LVGR---HSRKP---------WLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT--ALE 312
Query: 412 IKAHPWFKGI 421
HP+F+ +
Sbjct: 313 AMTHPYFQQV 322
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 478
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+G FG+V + ++K V K+ K + + + V +E ++ + +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SEMEMMKMIGKHK 147
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 261
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 262 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 287
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 288 VWSFGVLMWEIFTLGGSPY 306
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 70/271 (25%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 90
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL------------MRKDTLTEEEARFYV 223
N + L + L +I+E+ G++ T L + KD LT E Y
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 224 GETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDI----YKDPDY------ 200
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
+ D R P + ++APE + + Y ++ D WS
Sbjct: 201 --VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQSDVWS 231
Query: 344 LGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
G +++E+ +G YP DE CR++
Sbjct: 232 FGVLLWEIFSLGASPYPGVKIDEEF--CRRL 260
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 36 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 90
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 91 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 150
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL EK GS+ Q EQ
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLAT--------EKSRWSGSH-----------------QFEQ 185
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 186 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 95/264 (35%), Gaps = 83/264 (31%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRN 253
LI EY+ D L TLT+ + R+Y+ E + A++ H +HRD+KP N+++D
Sbjct: 126 LIFEYVNNTDFKVLY---PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 182
Query: 254 GH-MKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRR 312
++L D+GL + G+ R
Sbjct: 183 LRKLRLIDWGLAE---------------------FYHPGKEYNVR--------------- 206
Query: 313 MLAYSTVGTPDYIAPEVLLK-KGYGMECDWWSLGAIMYEMLVGYPPFY----SDEPMSTC 367
V + + PE+L+ + Y D WSLG + M+ PF+ + + +
Sbjct: 207 ------VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 260
Query: 368 RKIVN------------------------------WRTHLKFPEEAKLSPEAKDLISKLL 397
K++ W + + +SPEA D + KLL
Sbjct: 261 AKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 320
Query: 398 CNVEQRLGTKGADEIKAHPWFKGI 421
Q T A E HP+F+ +
Sbjct: 321 RYDHQERLT--ALEAMTHPYFQQV 342
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 16 IGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL EK GS+ Q EQ
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLAT--------EKSRWSGSH-----------------QFEQ 165
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 166 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 48/238 (20%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G+FG V + K G V A+K L + + Q++ K E +L + I+ L+
Sbjct: 44 IGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVGVLRKTRHVNIL-LFM 98
Query: 185 SFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG-ETVLAIESIHKHNYIHRDI 243
+ L ++ ++ G + L +T E + +T ++ +H + IHRD+
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 244 KPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQ 303
K +N+ L + +K+ DFGL EK GS+ Q EQ
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLAT--------EKSRWSGSH-----------------QFEQ 193
Query: 304 LQHWQRNRRMLAYSTVGTPDYIAPEVLL---KKGYGMECDWWSLGAIMYEMLVGYPPF 358
L G+ ++APEV+ K Y + D ++ G ++YE++ G P+
Sbjct: 194 LS--------------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK-----SEMLRRGQVEH 163
L+ ++ +D+F ++G+G FG+V R A G + A+K+LK+ E+ + +VE
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 164 VK--AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE----- 216
+ RNLL ++ +C + L + Y+ G + + L +
Sbjct: 89 ISMAVHRNLLR-------LRGFCMTPTERLL--VYPYMANGSVASCLRERPESQPPLDWP 139
Query: 217 EEARFYVGETVLAIESIHKH---NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+ R +G + + +H H IHRD+K N+LLD + DFGL K +D
Sbjct: 140 KRQRIALG-SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 193 YLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR 252
+L+ME LPG + +L + + E+ +G + ++ ++ K + H D++P N+++D
Sbjct: 318 WLVMEKLPGRLLSDMLAAGEEIDREKI---LGSLLRSLAALEKKGFWHDDVRPWNVMVDA 374
Query: 253 NGHMKLSDFG--LCKPLDCS 270
H +L DFG + P DCS
Sbjct: 375 RQHARLIDFGSIVTTPQDCS 394
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+G FG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 88
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK------ 202
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 203 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 228
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 229 VWSFGVLMWEIFTLGGSPY 247
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+L+D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+G FG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 93
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 207
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 208 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 233
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 234 VWSFGVLMWEIFTLGGSPY 252
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKK-----SEMLRRGQVEH 163
L+ ++ +D+F ++G+G FG+V R A G + A+K+LK+ E+ + +VE
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 164 VK--AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTE----- 216
+ RNLL ++ +C + L + Y+ G + + L +
Sbjct: 81 ISMAVHRNLLR-------LRGFCMTPTERLL--VYPYMANGSVASCLRERPESQPPLDWP 131
Query: 217 EEARFYVGETVLAIESIHKH---NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+ R +G + + +H H IHRD+K N+LLD + DFGL K +D
Sbjct: 132 KRQRIALG-SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+G FG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 90
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+EY G++ L + + + EE+ F
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 204
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 205 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 230
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 231 VWSFGVLMWEIFTLGGSPY 249
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L + TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+ Y G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 111/288 (38%), Gaps = 78/288 (27%)
Query: 80 KKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREK 139
K D E E+ + ++ ++ + ++++R +IG G FGEV R K
Sbjct: 18 KTYIDPETYEDPNRAVHQFAKELDASCIKIER------------VIGAGEFGEVCSGRLK 65
Query: 140 ATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYL 194
G A+K LK +E RR + E +++ + D +V L + + +
Sbjct: 66 LPGKRDVAVAIKTLKVGYTEKQRRDFL----CEASIMGQFDHPNVVHLEGVVTRGKPVMI 121
Query: 195 IMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK-------HNYIHRDIKPDN 247
++E++ G + L + D +F V + V + I Y+HRD+ N
Sbjct: 122 VIEFMENGALDAFLRKHD------GQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARN 175
Query: 248 LLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHW 307
+L++ N K+SDFG LS ++ D V
Sbjct: 176 ILVNSNLVCKVSDFG--------------------LSRVIEDDPEAV------------- 202
Query: 308 QRNRRMLAYSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
Y+T G + APE + + + D WS G +M+E++
Sbjct: 203 --------YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 60/248 (24%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKL------KKSEMLRRGQVEHVKAERNLLAEVDSNC 178
IGKG FG V R V A+K L ++EM+ + Q + E +++ ++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ--EFQREVFIMSNLNHPN 84
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF-YVGETVLAIESIHKHN 237
IVKLY + ++ME++P GD+ L+ K + + + + L IE + N
Sbjct: 85 IVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 238 --YIHRDIKPDNLL---LDRNGHM--KLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+HRD++ N+ LD N + K++DFG Q+ S+ S L G Q
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--------QQSVHSV-SGLLGNFQ-- 191
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
W +A T+G + + Y + D +S I+Y
Sbjct: 192 ----------------W------MAPETIGAEE---------ESYTEKADTYSFAMILYT 220
Query: 351 MLVGYPPF 358
+L G PF
Sbjct: 221 ILTGEGPF 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 104/275 (37%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 81
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + KD
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI------XKD--- 192
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
P R+ W +APE + + Y ++
Sbjct: 193 -------------PDXVRKGDARLPLKW-----------------MAPETIFDRVYTIQS 222
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 105/274 (38%), Gaps = 73/274 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 91
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL---------------MRKDTLTEEEAR 220
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 221 FYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
Y + +E + IHRD+ N+LL +K+ DFGL + I
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR------------DIX 199
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
+ + D R P + ++APE + + Y ++ D
Sbjct: 200 KDPDXVRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQSD 232
Query: 341 WWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
WS G +++E+ +G YP DE CR++
Sbjct: 233 VWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 264
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 133
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 134 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 125
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 126 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K V K+ K + + + + +E ++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGKHK 101
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK-----------DTLTEEEARF----- 221
I+ L + D LY+I+ Y G++ L + + + EE+ F
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ N MK++DFGL + ++ + +K
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK------ 215
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 216 ------TTNGRLPVK----------------------------WMAPEALFDRVYTHQSD 241
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +M+E+ +G P+
Sbjct: 242 VWSFGVLMWEIFTLGGSPY 260
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 78
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ E + G + + L + D A+F V + V + I
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 132
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 169
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 113
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 114 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 60/248 (24%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKL------KKSEMLRRGQVEHVKAERNLLAEVDSNC 178
IGKG FG V R V A+K L ++EM+ + Q + E +++ ++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQ--EFQREVFIMSNLNHPN 84
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF-YVGETVLAIESIHKHN 237
IVKLY + ++ME++P GD+ L+ K + + + + L IE + N
Sbjct: 85 IVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN 142
Query: 238 --YIHRDIKPDNLL---LDRNGHM--KLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSD 290
+HRD++ N+ LD N + K++DF L Q+ S+ S L G Q
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--------QQSVHSV-SGLLGNFQ-- 191
Query: 291 GRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYE 350
W +A T+G + + Y + D +S I+Y
Sbjct: 192 ----------------W------MAPETIGAEE---------ESYTEKADTYSFAMILYT 220
Query: 351 MLVGYPPF 358
+L G PF
Sbjct: 221 ILTGEGPF 228
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 105/275 (38%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 90
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + I
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR------------DI 198
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
+ + D R P + ++APE + + Y ++
Sbjct: 199 XKDPDXVRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQS 231
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 264
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 73
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ N +KL DFGL +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 73
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ N +KL DFGL +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ E + G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
Y+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 109 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 165
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 166 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 223
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 224 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 264
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 265 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318
Query: 412 IKAHPWFKGI 421
HP+F +
Sbjct: 319 ---HPYFYTV 325
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 41/250 (16%)
Query: 119 FEPLTMIGKGAFGEVRVCRE-KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
+E + +G+GAFG+V C + KA G A+K +K + E ++E +L +++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR----YCEAARSEIQVLEHLNTT 71
Query: 178 -------CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL--TEEEARFYVGETVL 228
C V++ F+ ++ ++ E L G + L + R +
Sbjct: 72 DPNSTFRC-VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ +H + H D+KP+N+L ++ + + + + + D L D + S
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR--DERTLINPDIKVVDFGSATYD 187
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
+ + V T Y APEV+L G+ CD WS+G I+
Sbjct: 188 DEHHS-----------------------TLVSTRHYRAPEVILALGWSQPCDVWSIGCIL 224
Query: 349 YEMLVGYPPF 358
E +G+ F
Sbjct: 225 IEYYLGFTVF 234
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 166 AERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE 225
AE N++ ++D+ IV++ + + ++ L+ME G + L + + ++ V +
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 115
Query: 226 TVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ ++ + + N++HRD+ N+LL + K+SDFGL K L
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 167 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 224
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 225 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 265
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 266 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 320 ---HPYFYTVVKDQ 330
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 321 ---HPYFYTVVKDQ 331
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 76
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 77 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 135
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+HRDI N+L+ N +KL DFGL + ++
Sbjct: 136 VHRDIAARNVLVSSNDCVKLGDFGLSRYME 165
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 75
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 76 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 134
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+HRDI N+L+ N +KL DFGL + ++
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYME 164
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 70
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 71 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 129
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ N +KL DFGL +
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 103/275 (37%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 81
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I E+ G++ T L + KD LT E
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + KD
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI------XKD--- 192
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
P R+ W +APE + + Y ++
Sbjct: 193 -------------PDXVRKGDARLPLKW-----------------MAPETIFDRVYTIQS 222
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 255
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 101
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 102 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 160
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ N +KL DFGL +
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 124 MIGKGAFGEVR---VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
++G+G FGEV K A+K KK L E +E ++ +D IV
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 88
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIESIHKHNYI 239
KL ++E ++IME P G++ L R K++L Y + A+ + N +
Sbjct: 89 KLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCK 265
HRDI N+L+ +KL DFGL +
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 110 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 166
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 167 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 224
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 225 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 265
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 266 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 320 ---HPYFYTVVKDQ 330
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 62/253 (24%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G GAFG+V + +E A V A+K LK + + E + +E +++ + +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTA--HADEKEALMSELKIMSHLGQHE 110
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEAR--------FYVGETV 227
IV L + + +I EY GD++ L RK L +E+ R + +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHM-KLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ + N IHRD+ N+LL NGH+ K+ DFGL + + + + ++ + N
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDI----MNDSNYIVKGNAR-- 223
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
PV ++APE + Y ++ D WS G
Sbjct: 224 -----LPV----------------------------KWMAPESIFDCVYTVQSDVWSYGI 250
Query: 347 IMYEML-VGYPPF 358
+++E+ +G P+
Sbjct: 251 LLWEIFSLGLNPY 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 62/253 (24%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G GAFG+V + +E A V A+K LK + + E + +E +++ + +
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTA--HADEKEALMSELKIMSHLGQHE 102
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKD--TLTEEEAR--------FYVGETV 227
IV L + + +I EY GD++ L RK L +E+ R + +
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHM-KLSDFGLCKPLDCSNLQEKDFSIGSNLSGA 286
+ + N IHRD+ N+LL NGH+ K+ DFGL + + + + ++ + N
Sbjct: 163 QGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDI----MNDSNYIVKGNAR-- 215
Query: 287 LQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGA 346
PV ++APE + Y ++ D WS G
Sbjct: 216 -----LPV----------------------------KWMAPESIFDCVYTVQSDVWSYGI 242
Query: 347 IMYEML-VGYPPF 358
+++E+ +G P+
Sbjct: 243 LLWEIFSLGLNPY 255
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 73
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 132
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ N +KL DFGL +
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 124 MIGKGAFGEVR---VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
++G+G FGEV K A+K KK L E +E ++ +D IV
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 76
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIESIHKHNYI 239
KL ++E ++IME P G++ L R K++L Y + A+ + N +
Sbjct: 77 KLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCK 265
HRDI N+L+ +KL DFGL +
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 78
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 79 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF 137
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ N +KL DFGL +
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 124 MIGKGAFGEVR---VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIV 180
++G+G FGEV K A+K KK L E +E ++ +D IV
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 72
Query: 181 KLYCSFQDDEYLYLIMEYLPGGDMMTLLMR-KDTLTEEEARFYVGETVLAIESIHKHNYI 239
KL ++E ++IME P G++ L R K++L Y + A+ + N +
Sbjct: 73 KLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 131
Query: 240 HRDIKPDNLLLDRNGHMKLSDFGLCK 265
HRDI N+L+ +KL DFGL +
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 55/254 (21%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 116 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 172
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 173 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 230
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 231 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 271
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 272 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 325
Query: 412 IKAHPWFKGIEWDK 425
HP+F + D+
Sbjct: 326 ---HPYFYTVVKDQ 336
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 127
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 188 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI----YKDPDY-- 241
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
+ D R P + ++APE + + Y ++
Sbjct: 242 ------VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQS 268
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 269 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 301
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 104/275 (37%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 90
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + KD
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI------YKD--- 201
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
P R+ W +APE + + Y ++
Sbjct: 202 -------------PDXVRKGDARLPLKW-----------------MAPETIFDRVYTIQS 231
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 264
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 105/270 (38%), Gaps = 79/270 (29%)
Query: 125 IGKGAFGEVRVC-----REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+G FG+V + +A A+K LK E ++ + +E N+L +V+ +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR------------------------KDTLT 215
+KLY + D L LI+EY G + L + LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 216 EEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEK 275
+ + + ++ + + + +HRD+ N+L+ MK+SDFGL + ++ E+
Sbjct: 149 MGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEE 203
Query: 276 DFSIGSNLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG 334
D S +S GR PV ++A E L
Sbjct: 204 D-------SXVKRSQGRIPV----------------------------KWMAIESLFDHI 228
Query: 335 YGMECDWWSLGAIMYEMLV-------GYPP 357
Y + D WS G +++E++ G PP
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 87 VSEEEQNNLLKYLEKKETEYMRLQR-HKMGADDFEPLTMIGKGAFGEVR---VCREKATG 142
VS E ++ + +++++T M R +++ + E IG+G FG+V +
Sbjct: 359 VSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPA 418
Query: 143 HVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLP 200
A+K K S+ +R E E + + D IVKL ++ +++IME
Sbjct: 419 MAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHIVKLIGVITENP-VWIIMELCT 473
Query: 201 GGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLS 259
G++ + L +RK +L Y + A+ + ++HRDI N+L+ +KL
Sbjct: 474 LGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLG 533
Query: 260 DFGLCKPLDCSN 271
DFGL + ++ S
Sbjct: 534 DFGLSRYMEDST 545
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 90
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI----YKDPDY-- 204
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
+ D R P + ++APE + + Y ++
Sbjct: 205 ------VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQS 231
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 264
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 108/275 (39%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 92
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I+E+ G++ T L + KD LT E
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 153 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI----YKDPDY-- 206
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
+ D R P + ++APE + + Y ++
Sbjct: 207 ------VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQS 233
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 234 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 266
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 107/275 (38%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 81
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I E+ G++ T L + KD LT E
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI----YKDPDY-- 195
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
+ D R P + ++APE + + Y ++
Sbjct: 196 ------VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQS 222
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 255
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 55/250 (22%)
Query: 194 LIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDR- 252
L+ E++ D L TLT+ + RFY+ E + A++ H +HRD+KP N+++D
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 253 NGHMKLSDFGLCKPLDCSNLQEKDFSIGS---------------NLSGALQSDGRPVAPR 297
+ ++L D+GL + QE + + S + S + S G +A
Sbjct: 168 HRKLRLIDWGLAEFYHPG--QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 298 RTQQEQLQHWQRNRRMLA--YSTVGTP---DYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
++E H N L +GT DYI Y +E D
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI-------DKYNIELD------------ 266
Query: 353 VGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSPEAKDLISKLL-CNVEQRLGTKGADE 411
P ++D RK W + + +SPEA D + KLL + + RL + A E
Sbjct: 267 ----PRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 320
Query: 412 IKAHPWFKGI 421
HP+F +
Sbjct: 321 ---HPYFYPV 327
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 107/275 (38%), Gaps = 74/275 (26%)
Query: 125 IGKGAFGEV-----RVCREKATGHVYAMKKLKKSEMLRRGQVEH--VKAERNLLAEVDS- 176
+G+GAFG+V + AT A+K LK+ EH + +E +L +
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHH 81
Query: 177 -NCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLL----------------MRKDTLTEEEA 219
N + L + L +I E+ G++ T L + KD LT E
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 220 RFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSI 279
Y + +E + IHRD+ N+LL +K+ DFGL + + ++ D+
Sbjct: 142 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI----YKDPDY-- 195
Query: 280 GSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMEC 339
+ D R P + ++APE + + Y ++
Sbjct: 196 ------VRKGDAR--LPLK-------------------------WMAPETIFDRVYTIQS 222
Query: 340 DWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
D WS G +++E+ +G YP DE CR++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 255
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 79/270 (29%)
Query: 125 IGKGAFGEVRVC-----REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+G FG+V + +A A+K LK E ++ + +E N+L +V+ +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR------------------------KDTLT 215
+KLY + D L LI+EY G + L + LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 216 EEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEK 275
+ + + ++ + + +HRD+ N+L+ MK+SDFGL + ++ E+
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEE 203
Query: 276 DFSIGSNLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG 334
D S +S GR PV ++A E L
Sbjct: 204 D-------SXVKRSQGRIPV----------------------------KWMAIESLFDHI 228
Query: 335 YGMECDWWSLGAIMYEMLV-------GYPP 357
Y + D WS G +++E++ G PP
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 121
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 126/312 (40%), Gaps = 78/312 (25%)
Query: 79 EKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVR---- 134
E +L +V+ N Y++ +E EY + + ++ E ++G GAFG+V
Sbjct: 10 ESQLQMVQVTGSSDNEYF-YVDFREYEYDL--KWEFPRENLEFGKVLGSGAFGKVMNATA 66
Query: 135 --VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN-CIVKLYCSFQDDEY 191
+ + + V A+K LK E + E + +E ++ ++ S+ IV L +
Sbjct: 67 YGISKTGVSIQV-AVKMLK--EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123
Query: 192 LYLIMEYLPGGDMMTLLMRK-----------------------DTLTEEEARFYVGETVL 228
+YLI EY GD++ L K + LT E+ + +
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
+E + + +HRD+ N+L+ +K+ DFGL + I S+ + ++
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR------------DIMSDSNYVVR 231
Query: 289 SDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAI 347
+ R PV ++APE L + Y ++ D WS G +
Sbjct: 232 GNARLPV----------------------------KWMAPESLFEGIYTIKSDVWSYGIL 263
Query: 348 MYEML-VGYPPF 358
++E+ +G P+
Sbjct: 264 LWEIFSLGVNPY 275
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 60/260 (23%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 127
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--------------- 172
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
Q+D V + R + ++ + APE L + + D W
Sbjct: 173 ----QNDDHXV-------------MQEHRKVPFA------WCAPESLKTRTFSHASDTWM 209
Query: 344 LGAIMYEMLVGYPPFYSDEP 363
G ++EM Y EP
Sbjct: 210 FGVTLWEMFT-----YGQEP 224
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 97/260 (37%), Gaps = 60/260 (23%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 117
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNL 283
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--------------- 162
Query: 284 SGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWS 343
Q+D V + R + ++ + APE L + + D W
Sbjct: 163 ----QNDDHXV-------------MQEHRKVPFA------WCAPESLKTRTFSHASDTWM 199
Query: 344 LGAIMYEMLVGYPPFYSDEP 363
G ++EM Y EP
Sbjct: 200 FGVTLWEMFT-----YGQEP 214
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 109/286 (38%), Gaps = 65/286 (22%)
Query: 98 YLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVR--VCREKATGHVYAMKKLKKSEM 155
YL E+ + L + ++F+ +IG G FG+V V R+ A A+K+ ++
Sbjct: 20 YLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK---VALKR--RTPE 74
Query: 156 LRRGQVEHVKAERNLLAEVDSNC----IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK 211
+G E L S C +V L + + LI +Y+ G++ L
Sbjct: 75 SSQGIEEFETEIETL-----SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 212 DTLT-----EEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKP 266
D T E+ +G + +H IHRD+K N+LLD N K++DFG+ K
Sbjct: 130 DLPTMSMSWEQRLEICIG-AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK- 187
Query: 267 LDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIA 326
+ T+ +Q L GT YI
Sbjct: 188 ------------------------------KGTELDQTH--------LXXVVKGTLGYID 209
Query: 327 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVN 372
PE +K + D +S G +++E+L P R++VN
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP----REMVN 251
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 127
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 128 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 74
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 75 VDNPHVCRL-LGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 180
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 181 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 214
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 215 TFGSKPYDGIPASEISSIL 233
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 69 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 121
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 122 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 79/270 (29%)
Query: 125 IGKGAFGEVRVC-----REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+G FG+V + +A A+K LK E ++ + +E N+L +V+ +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--ENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMR------------------------KDTLT 215
+KLY + D L LI+EY G + L + LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 216 EEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEK 275
+ + + ++ + + +HRD+ N+L+ MK+SDFGL + ++ E+
Sbjct: 149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEE 203
Query: 276 DFSIGSNLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG 334
D S +S GR PV ++A E L
Sbjct: 204 D-------SYVKRSQGRIPV----------------------------KWMAIESLFDHI 228
Query: 335 YGMECDWWSLGAIMYEMLV-------GYPP 357
Y + D WS G +++E++ G PP
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 68/259 (26%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G GAFG+V + +E A V A+K LK + + E + +E +++ + +
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTA--HADEKEALMSELKIMSHLGQHE 110
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
IV L + + +I EY GD++ L RK + L+ +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHM-KLSDFGLCKPLDCSNLQEKDFSIG 280
+ + + + N IHRD+ N+LL NGH+ K+ DFGL + + + + ++ +
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDI----MNDSNYIVK 225
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
N PV ++APE + Y ++ D
Sbjct: 226 GNAR-------LPV----------------------------KWMAPESIFDCVYTVQSD 250
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 251 VWSYGILLWEIFSLGLNPY 269
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 117
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKA-TGHVY--AMKKLKKSEMLRRGQVEHVKAERNL 170
+G D L +G G+FG VR A +G A+K LK + + ++ E N
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVG------ 224
+ +D +++LY + ++ E P G ++ D L + + F +G
Sbjct: 65 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL------DRLRKHQGHFLLGTLSRYA 117
Query: 225 -ETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPL 267
+ + + +IHRD+ NLLL +K+ DFGL + L
Sbjct: 118 VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 125 IGKGAFGEVR---VCREKATGHVYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNCI 179
IG+G FG+V + A+K K S+ +R E E + + D I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 73
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLL-MRKDTLTEEEARFYVGETVLAIESIHKHNY 238
VKL ++ +++IME G++ + L +RK +L Y + A+ + +
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 132
Query: 239 IHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+HRDI N+L+ +KL DFGL +
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 77
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 78 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 183
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 184 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 217
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 218 TFGSKPYDGIPASEISSIL 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK------ 208
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 209 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 234
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 76 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 181
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 182 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 215
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 216 TFGSKPYDGIPASEISSIL 234
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 74 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 179
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 180 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 214 TFGSKPYDGIPASEISSIL 232
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 74
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 75 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 180
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 181 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 214
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 215 TFGSKPYDGIPASEISSIL 233
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 83
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 144 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 197
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 198 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 223
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 224 VWSFGVLLWEIFTLGGSPY 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 86
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 147 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 200
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 201 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 226
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 227 VWSFGVLLWEIFTLGGSPY 245
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 41/250 (16%)
Query: 119 FEPLTMIGKGAFGEVRVCRE-KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN 177
+E + +G+GAFG+V C + KA G A+K +K + E ++E +L +++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR----YCEAARSEIQVLEHLNTT 71
Query: 178 -------CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTL--TEEEARFYVGETVL 228
C V++ F+ ++ ++ E L G + L + R +
Sbjct: 72 DPNSTFRC-VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQ 288
++ +H + H D+KP+N+L ++ + + + + + D L D + S
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR--DERTLINPDIKVVDFGSATYD 187
Query: 289 SDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIM 348
+ + V Y APEV+L G+ CD WS+G I+
Sbjct: 188 DEHHS-----------------------TLVXXRHYRAPEVILALGWSQPCDVWSIGCIL 224
Query: 349 YEMLVGYPPF 358
E +G+ F
Sbjct: 225 IEYYLGFTVF 234
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 77 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 183 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 217 TFGSKPYDGIPASEISSIL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 108/286 (37%), Gaps = 65/286 (22%)
Query: 98 YLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVR--VCREKATGHVYAMKKLKKSEM 155
YL E+ + L + ++F+ +IG G FG+V V R+ A A+K+ ++
Sbjct: 20 YLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK---VALKR--RTPE 74
Query: 156 LRRGQVEHVKAERNLLAEVDSNC----IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK 211
+G E L S C +V L + + LI +Y+ G++ L
Sbjct: 75 SSQGIEEFETEIETL-----SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 212 DTLT-----EEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKP 266
D T E+ +G + +H IHRD+K N+LLD N K++DFG+ K
Sbjct: 130 DLPTMSMSWEQRLEICIG-AARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK- 187
Query: 267 LDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIA 326
+ T+ Q L GT YI
Sbjct: 188 ------------------------------KGTELGQTH--------LXXVVKGTLGYID 209
Query: 327 PEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVN 372
PE +K + D +S G +++E+L P R++VN
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP----REMVN 251
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDT----------------LTEEEARF 221
I+ L + D LY+I+EY G++ L ++ L+ ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 208
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 209 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 234
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 208
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 209 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 234
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 87
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 148 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 201
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 202 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 227
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 228 VWSFGVLLWEIFTLGGSPY 246
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 124 MIGKGAFGEVRVCREKATGH---VYAMKKLKK--SEMLRRGQVEHVKAERNLLAEVDSNC 178
++G G FGEV R K A+K LK +E RR + E +++ + D
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL----GEASIMGQFDHPN 107
Query: 179 IVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGETVLAIESIHK--- 235
I++L + + ++ E + G + + L + D A+F V + V + I
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMK 161
Query: 236 ----HNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+HRD+ N+L++ N K+SDFGL + L+
Sbjct: 162 YLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE 198
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 124 MIGKGAFGEVRVC--REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVK 181
M+GKG FG VR +++ V K+ K++++ +E E + E D + K
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 182 LY-CSFQDDE-----YLYLIMEYLPGGDMMTLLMRK-------DTLTEEEARFYVGETVL 228
L S + +I+ ++ GD+ L+ + + RF V +
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV-DIAC 148
Query: 229 AIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCK 265
+E + N+IHRD+ N +L + + ++DFGL +
Sbjct: 149 GMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 79
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 140 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 193
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 194 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 219
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 220 VWSFGVLLWEIFTLGGSPY 238
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 135
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 249
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 250 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 275
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 276 VWSFGVLLWEIFTLGGSPY 294
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 71/260 (27%)
Query: 125 IGKGAFGEVRV--CRE---KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+GAFG+V + C + + A+K LK++ R + + E LL + I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 105
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE-----------TVL 228
V+ + + L ++ EY+ GD+ L +A+ G +L
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP----DAKLLAGGEDVAPGPLGLGQLL 161
Query: 229 AIES--------IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
A+ S + +++HRD+ N L+ + +K+ DFG+ + + ++ + +G
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY----YRVG 217
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
GR + P R ++ PE +L + + E D
Sbjct: 218 ----------GRTMLPIR-------------------------WMPPESILYRKFTTESD 242
Query: 341 WWSLGAIMYEMLV-GYPPFY 359
WS G +++E+ G P+Y
Sbjct: 243 VWSFGVVLWEIFTYGKQPWY 262
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 104/259 (40%), Gaps = 66/259 (25%)
Query: 125 IGKGAFGEVRVC------REKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G+GAFG+V + ++K K+ KS+ + + + +E ++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGKHK 94
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK----------------DTLTEEEARF 221
I+ L + D LY+I+EY G++ L + + L+ ++
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 222 YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGS 281
+ +E + IHRD+ N+L+ + MK++DFGL + + + +K
Sbjct: 155 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK------ 208
Query: 282 NLSGALQSDGR-PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
++GR PV ++APE L + Y + D
Sbjct: 209 ------TTNGRLPVK----------------------------WMAPEALFDRIYTHQSD 234
Query: 341 WWSLGAIMYEML-VGYPPF 358
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 71/260 (27%)
Query: 125 IGKGAFGEVRV--CRE---KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+GAFG+V + C + + A+K LK++ R + + E LL + I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 82
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE-----------TVL 228
V+ + + L ++ EY+ GD+ L +A+ G +L
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP----DAKLLAGGEDVAPGPLGLGQLL 138
Query: 229 AIES--------IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
A+ S + +++HRD+ N L+ + +K+ DFG+ + + ++ + +G
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY----YRVG 194
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
GR + P R ++ PE +L + + E D
Sbjct: 195 ----------GRTMLPIR-------------------------WMPPESILYRKFTTESD 219
Query: 341 WWSLGAIMYEMLV-GYPPFY 359
WS G +++E+ G P+Y
Sbjct: 220 VWSFGVVLWEIFTYGKQPWY 239
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 104/260 (40%), Gaps = 71/260 (27%)
Query: 125 IGKGAFGEVRV--CRE---KATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCI 179
+G+GAFG+V + C + + A+K LK++ R + + E LL + I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 76
Query: 180 VKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGE-----------TVL 228
V+ + + L ++ EY+ GD+ L +A+ G +L
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGP----DAKLLAGGEDVAPGPLGLGQLL 132
Query: 229 AIES--------IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
A+ S + +++HRD+ N L+ + +K+ DFG+ + + ++ + +G
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY----YRVG 188
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
GR + P R ++ PE +L + + E D
Sbjct: 189 ----------GRTMLPIR-------------------------WMPPESILYRKFTTESD 213
Query: 341 WWSLGAIMYEMLV-GYPPFY 359
WS G +++E+ G P+Y
Sbjct: 214 VWSFGVVLWEIFTYGKQPWY 233
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
M +F IG G FGE+R+ + T A +K M R H+ E +
Sbjct: 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL--EYRFYKQ 60
Query: 174 VDS-NCIVKLYCSFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAI 230
+ S + I ++Y +Y +++E L D+ L R T + + + + +
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDR--TFSLKTVLMIAIQLISRM 118
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGH-----MKLSDFGLCK 265
E +H N I+RD+KP+N L+ R G+ + + DFGL K
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 74 VDNPHVCRL-LGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 179
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 180 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 214 TFGSKPYDGIPASEISSIL 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 103/286 (36%), Gaps = 92/286 (32%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL---------KKSEMLRRGQVEHVKA 166
A D L +GKG +GEV R G A+K +++E+ + H
Sbjct: 7 ARDITLLECVGKGRYGEV--WRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH--- 61
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
N+L + S+ S L+LI Y G + L T R
Sbjct: 62 -ENILGFIASD-----MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI----- 110
Query: 227 VLAIESIHKHNYI------------HRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQE 274
VL+I S H +I HRD+K N+L+ +NG ++D GL S Q
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ- 169
Query: 275 KDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG 334
+G+N PR VGT Y+APEV L +
Sbjct: 170 --LDVGNN-------------PR---------------------VGTKRYMAPEV-LDET 192
Query: 335 YGMEC-------DWWSLGAIMYEM---LVGY-------PPFYSDEP 363
++C D W+ G +++E+ +V PPFY P
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 75/266 (28%)
Query: 125 IGKGAFGEV------RVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSN- 177
+G GAFG+V + +E A V A+K LK + + E + +E +++ + +
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKV-AVKMLKSTA--HADEKEALMSELKIMSHLGQHE 95
Query: 178 CIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRK---------------DTLTEEEAR-- 220
IV L + + +I EY GD++ L RK + L +E+ R
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 221 ------FYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHM-KLSDFGLCKPLDCSNLQ 273
+ + + + N IHRD+ N+LL NGH+ K+ DFGL + + +
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDI----MN 210
Query: 274 EKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKK 333
+ ++ + N PV ++APE +
Sbjct: 211 DSNYIVKGNAR-------LPV----------------------------KWMAPESIFDC 235
Query: 334 GYGMECDWWSLGAIMYEML-VGYPPF 358
Y ++ D WS G +++E+ +G P+
Sbjct: 236 VYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 49/259 (18%)
Query: 124 MIGKGAFGEVRVCR--EKATGHV-YAMKKLKK-SEMLRRGQVEHVKAERNLLAEVDSNCI 179
+IGKG FG V ++A + A+K L + +EM QVE E L+ ++ +
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM---QQVEAFLREGLLMRGLNHPNV 84
Query: 180 VKLYCSFQDDEYL-YLIMEYLPGGDMMTLLM--RKDTLTEEEARFYVGETVLAIESIHKH 236
+ L E L ++++ Y+ GD++ + +++ ++ F + + +E + +
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARGMEYLAEQ 143
Query: 237 NYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAP 296
++HRD+ N +LD + +K++DFGL + + L + +S+ + L PV
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDI----LDREYYSVQQHRHARL-----PV-- 192
Query: 297 RRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLV-GY 355
+ T E LQ ++ + + D WS G +++E+L G
Sbjct: 193 KWTALESLQTYR--------------------------FTTKSDVWSFGVLLWELLTRGA 226
Query: 356 PPFYSDEPMSTCRKIVNWR 374
PP+ +P + R
Sbjct: 227 PPYRHIDPFDLTHFLAQGR 245
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 79
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 80 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 185
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 186 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 219
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 220 TFGSKPYDGIPASEISSIL 238
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 83
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 84 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 189
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 190 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 223
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 224 TFGSKPYDGIPASEISSIL 242
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 77 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 183 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 217 TFGSKPYDGIPASEISSIL 235
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 76 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 181
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 182 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 215
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 216 TFGSKPYDGIPASEISSIL 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 74 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 179
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 180 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 214 TFGSKPYDGIPASEISSIL 232
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 168 RNLLAEVDSNCIVKLY-----CSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFY 222
R LAEV IV+++ D Y++MEY+ G + + L EA Y
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR--SKGQKLPVAEAIAY 187
Query: 223 VGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFG 262
+ E + A+ +H ++ D+KP+N++L +KL D G
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 98
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 99 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 204
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 205 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 238
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 239 TFGSKPYDGIPASEISSIL 257
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 100/260 (38%), Gaps = 51/260 (19%)
Query: 109 LQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAER 168
LQ + + E +IGKG FG+V R H +L E Q++ K E
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGR----WHGEVAIRLIDIERDNEDQLKAFKREV 80
Query: 169 NLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETV 227
+ +V + +L +I G + +++ K L + R E V
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIV 140
Query: 228 LAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGAL 287
+ +H +H+D+K N+ D NG + ++DFGL FSI SG L
Sbjct: 141 KGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGL-------------FSI----SGVL 182
Query: 288 QSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLL---------KKGYGME 338
Q A RR + ++Q+ G ++APE++ K +
Sbjct: 183 Q------AGRREDKLRIQN-------------GWLCHLAPEIIRQLSPDTEEDKLPFSKH 223
Query: 339 CDWWSLGAIMYEMLVGYPPF 358
D ++LG I YE+ PF
Sbjct: 224 SDVFALGTIWYELHAREWPF 243
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 77 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 183 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 217 TFGSKPYDGIPASEISSIL 235
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 186
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 187 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 220
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 221 TFGSKPYDGIPASEISSIL 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 179
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 180 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 213
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 214 TFGSKPYDGIPASEISSIL 232
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 77 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 182
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 183 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 216
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 217 TFGSKPYDGIPASEISSIL 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 76 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFG K L +EK++ ++G
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA---EEKEY----------HAEGG 181
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 182 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 215
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 216 TFGSKPYDGIPASEISSIL 234
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 125/311 (40%), Gaps = 64/311 (20%)
Query: 68 LEERKERRNILEKKLADAEVSEEEQNN--LLKYLEKKETEYMRLQRHKMGADDFEPLTMI 125
+ +R RR + E++L + E N LL+ L KETE F+ + ++
Sbjct: 13 VRKRTLRRLLQERELVEPLTPSGEAPNQALLRIL--KETE-------------FKKIKVL 57
Query: 126 GKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVK 181
G GAFG V + + A+ +L+++ + + + E ++A VD+ + +
Sbjct: 58 GSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK--EILDEAYVMASVDNPHVCR 115
Query: 182 LYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIESIHKHNYIH 240
L + LI + +P G ++ + KD + + + + + + +H
Sbjct: 116 L-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVH 174
Query: 241 RDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQ 300
RD+ N+L+ H+K++DFGL K L +EK++ ++G V +
Sbjct: 175 RDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGGKVPIK--- 218
Query: 301 QEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYS 360
++A E +L + Y + D WS G ++E++ Y
Sbjct: 219 -----------------------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
Query: 361 DEPMSTCRKIV 371
P S I+
Sbjct: 256 GIPASEISSIL 266
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 76 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFG K L +EK++ ++G
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA---EEKEY----------HAEGG 181
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 182 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 215
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 216 TFGSKPYDGIPASEISSIL 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 45/166 (27%)
Query: 209 MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+ KD LT E Y + +E + IHRD+ N+LL +K+ DFGL + +
Sbjct: 190 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI- 248
Query: 269 CSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE 328
++ D+ + D R P + ++APE
Sbjct: 249 ---YKDPDY--------VRKGDAR--LPLK-------------------------WMAPE 270
Query: 329 VLLKKGYGMECDWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
+ + Y ++ D WS G +++E+ +G YP DE CR++
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 314
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 77
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 78 VDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFG K L +EK++ ++G
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGA---EEKEY----------HAEGG 183
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 184 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 217
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 218 TFGSKPYDGIPASEISSIL 236
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 45/166 (27%)
Query: 209 MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+ KD LT E Y + +E + IHRD+ N+LL +K+ DFGL + +
Sbjct: 183 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI- 241
Query: 269 CSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE 328
++ D+ + D R P + ++APE
Sbjct: 242 ---YKDPDY--------VRKGDAR--LPLK-------------------------WMAPE 263
Query: 329 VLLKKGYGMECDWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
+ + Y ++ D WS G +++E+ +G YP DE CR++
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 307
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++ GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LIM+ +P G ++ + KD + + + + +
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 186
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 187 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 220
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 221 TFGSKPYDGIPASEISSIL 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 45/166 (27%)
Query: 209 MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+ KD LT E Y + +E + IHRD+ N+LL +K+ DFGL + +
Sbjct: 185 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI- 243
Query: 269 CSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE 328
++ D+ + D R P + ++APE
Sbjct: 244 ---YKDPDY--------VRKGDAR--LPLK-------------------------WMAPE 265
Query: 329 VLLKKGYGMECDWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
+ + Y ++ D WS G +++E+ +G YP DE CR++
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 309
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 45/166 (27%)
Query: 209 MRKDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLD 268
+ KD LT E Y + +E + IHRD+ N+LL +K+ DFGL + +
Sbjct: 192 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI- 250
Query: 269 CSNLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPE 328
++ D+ + D R P + ++APE
Sbjct: 251 ---YKDPDY--------VRKGDAR--LPLK-------------------------WMAPE 272
Query: 329 VLLKKGYGMECDWWSLGAIMYEML-VG---YPPFYSDEPMSTCRKI 370
+ + Y ++ D WS G +++E+ +G YP DE CR++
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRL 316
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 67
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 68 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 173
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 174 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 207
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 208 TFGSKPYDGIPASEISSIL 226
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 125 IGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYC 184
IG G FGE+R+ + T A +K + R H++ + ++Y
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVA---IKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYY 64
Query: 185 SFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAIESIHKHNYIHRD 242
+Y +++E L D+ L R T T + + + +E +H N I+RD
Sbjct: 65 FGPXGKYNAMVLELLGPSLEDLFDLCDR--TFTLKTVLMIAIQLLSRMEYVHSKNLIYRD 122
Query: 243 IKPDNLLLDRNGHMK-----LSDFGLCK 265
+KP+N L+ R G+ K + DFGL K
Sbjct: 123 VKPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 47/259 (18%)
Query: 118 DFEPLTMIGKGAFGEVR----VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
+F+ + ++G GAFG V + + A+K+L+++ + + + E ++A
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 70
Query: 174 VDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLM-RKDTLTEEEARFYVGETVLAIES 232
VD+ + +L + LI + +P G ++ + KD + + + + +
Sbjct: 71 VDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 233 IHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNLSGALQSDGR 292
+ +HRD+ N+L+ H+K++DFGL K L +EK++ ++G
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA---EEKEY----------HAEGG 176
Query: 293 PVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEML 352
V + ++A E +L + Y + D WS G ++E++
Sbjct: 177 KVPIK--------------------------WMALESILHRIYTHQSDVWSYGVTVWELM 210
Query: 353 VGYPPFYSDEPMSTCRKIV 371
Y P S I+
Sbjct: 211 TFGSKPYDGIPASEISSIL 229
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 40/149 (26%)
Query: 211 KDTLTEEEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCS 270
K+ +T E+ Y + +E + IHRD+ N+LL N +K+ DFGL +
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR----- 247
Query: 271 NLQEKDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVL 330
I N + D R P + ++APE +
Sbjct: 248 -------DIYKNPDYVRKGDTR--LPLK-------------------------WMAPESI 273
Query: 331 LKKGYGMECDWWSLGAIMYEML-VGYPPF 358
K Y + D WS G +++E+ +G P+
Sbjct: 274 FDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 114 MGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAE 173
M +F IG G FGE+R+ + T A +K M R H+ E +
Sbjct: 6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVA---IKLEPMKSRAPQLHL--EYRFYKQ 60
Query: 174 VDS-NCIVKLYCSFQDDEYLYLIMEYLPGG--DMMTLLMRKDTLTEEEARFYVGETVLAI 230
+ S + I ++Y +Y +++E L D+ L R T + + + + +
Sbjct: 61 LGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDR--TFSLKTVLMIAIQLISRM 118
Query: 231 ESIHKHNYIHRDIKPDNLLLDRNGH-----MKLSDFGLCK 265
E +H N I+RD+KP+N L+ R G+ + + DF L K
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 61/251 (24%)
Query: 120 EPLTM---IGKGAFGEVR------VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
E +TM +G+G+FG V V +++ V A+K + ++ +R ++E + E ++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRE-RIEFLN-EASV 81
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF--------- 221
+ E + + +V+L + +IME + GD+ + L E
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 222 -YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
GE + ++ + ++HRD+ N ++ + +K+ DFG+ + ++ E D+
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDY--- 193
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
+ G+ + P R +++PE L + D
Sbjct: 194 ------YRKGGKGLLPVR-------------------------WMSPESLKDGVFTTYSD 222
Query: 341 WWSLGAIMYEM 351
WS G +++E+
Sbjct: 223 VWSFGVVLWEI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 61/251 (24%)
Query: 120 EPLTM---IGKGAFGEVR------VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
E +TM +G+G+FG V V +++ V A+K + ++ +R ++E + E ++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRE-RIEFLN-EASV 75
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF--------- 221
+ E + + +V+L + +IME + GD+ + L E
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 222 -YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
GE + ++ + ++HRD+ N ++ + +K+ DFG+ + ++ E D+
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDY--- 187
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
+ G+ + P R +++PE L + D
Sbjct: 188 ------YRKGGKGLLPVR-------------------------WMSPESLKDGVFTTYSD 216
Query: 341 WWSLGAIMYEM 351
WS G +++E+
Sbjct: 217 VWSFGVVLWEI 227
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 102/286 (35%), Gaps = 92/286 (32%)
Query: 116 ADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKL---------KKSEMLRRGQVEHVKA 166
A L +GKG +GEV R G A+K +++E+ + H
Sbjct: 7 AHQITLLECVGKGRYGEV--WRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH--- 61
Query: 167 ERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARFYVGET 226
N+L + S+ S L+LI Y G + L T R
Sbjct: 62 -ENILGFIASD-----MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI----- 110
Query: 227 VLAIESIHKHNYI------------HRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQE 274
VL+I S H +I HRD+K N+L+ +NG ++D GL S Q
Sbjct: 111 VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ- 169
Query: 275 KDFSIGSNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKG 334
+G+N PR VGT Y+APEV L +
Sbjct: 170 --LDVGNN-------------PR---------------------VGTKRYMAPEV-LDET 192
Query: 335 YGMEC-------DWWSLGAIMYEM---LVGY-------PPFYSDEP 363
++C D W+ G +++E+ +V PPFY P
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 103/251 (41%), Gaps = 61/251 (24%)
Query: 120 EPLTM---IGKGAFGEVR------VCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNL 170
E +TM +G+G+FG V V +++ V A+K + ++ +R ++E + E ++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRE-RIEFLN-EASV 72
Query: 171 LAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEEEARF--------- 221
+ E + + +V+L + +IME + GD+ + L E
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 222 -YVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIG 280
GE + ++ + ++HRD+ N ++ + +K+ DFG+ + ++ E D+
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDY--- 184
Query: 281 SNLSGALQSDGRPVAPRRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECD 340
+ G+ + P R +++PE L + D
Sbjct: 185 ------YRKGGKGLLPVR-------------------------WMSPESLKDGVFTTYSD 213
Query: 341 WWSLGAIMYEM 351
WS G +++E+
Sbjct: 214 VWSFGVVLWEI 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,363,147
Number of Sequences: 62578
Number of extensions: 689890
Number of successful extensions: 5183
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 1969
Number of HSP's gapped (non-prelim): 2151
length of query: 549
length of database: 14,973,337
effective HSP length: 104
effective length of query: 445
effective length of database: 8,465,225
effective search space: 3767025125
effective search space used: 3767025125
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)