Query 038143
Match_columns 103
No_of_seqs 134 out of 1454
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 08:00:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038143.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038143hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.9 5.4E-26 1.2E-30 124.2 3.6 91 3-99 39-130 (226)
2 KOG4412 26S proteasome regulat 99.9 2.2E-24 4.7E-29 118.0 6.4 94 2-101 72-165 (226)
3 PF12796 Ank_2: Ankyrin repeat 99.9 1E-22 2.2E-27 102.5 9.9 85 6-101 1-85 (89)
4 PHA02875 ankyrin repeat protei 99.9 8.6E-21 1.9E-25 117.7 10.0 92 3-101 103-194 (413)
5 PHA02791 ankyrin-like protein; 99.9 1.3E-20 2.7E-25 111.9 9.7 55 4-60 63-117 (284)
6 PHA02791 ankyrin-like protein; 99.8 1.7E-20 3.6E-25 111.4 9.7 91 2-101 30-120 (284)
7 PHA02743 Viral ankyrin protein 99.8 2.9E-20 6.2E-25 103.2 9.2 91 3-100 58-153 (166)
8 KOG4214 Myotrophin and similar 99.8 3E-20 6.5E-25 91.8 8.0 91 3-101 3-93 (117)
9 PHA02741 hypothetical protein; 99.8 9.1E-20 2E-24 101.4 9.7 94 2-100 21-124 (169)
10 KOG0509 Ankyrin repeat and DHH 99.8 2.5E-20 5.3E-25 117.1 8.1 92 2-100 112-203 (600)
11 PHA02878 ankyrin repeat protei 99.8 7E-20 1.5E-24 115.5 9.9 93 2-101 168-261 (477)
12 PHA02874 ankyrin repeat protei 99.8 7.9E-20 1.7E-24 114.1 9.9 93 2-101 124-216 (434)
13 KOG0512 Fetal globin-inducing 99.8 6.4E-20 1.4E-24 100.2 7.7 90 6-101 67-156 (228)
14 PHA02795 ankyrin-like protein; 99.8 1.6E-19 3.4E-24 111.7 8.9 93 2-101 188-288 (437)
15 KOG0508 Ankyrin repeat protein 99.8 2.7E-20 5.8E-25 114.3 5.4 92 3-101 118-209 (615)
16 PHA02743 Viral ankyrin protein 99.8 4.1E-19 8.9E-24 98.5 9.5 93 2-101 20-121 (166)
17 KOG0510 Ankyrin repeat protein 99.8 9.3E-20 2E-24 117.4 7.5 95 2-101 306-403 (929)
18 KOG0195 Integrin-linked kinase 99.8 1.1E-19 2.4E-24 106.3 7.1 92 3-101 35-126 (448)
19 PHA02884 ankyrin repeat protei 99.8 6E-19 1.3E-23 105.2 10.2 91 4-101 35-130 (300)
20 KOG0509 Ankyrin repeat and DHH 99.8 1.2E-19 2.5E-24 114.1 7.4 87 5-98 81-168 (600)
21 PHA02736 Viral ankyrin protein 99.8 9.3E-20 2E-24 100.0 6.2 91 3-100 56-151 (154)
22 PLN03192 Voltage-dependent pot 99.8 4.5E-19 9.7E-24 117.7 9.7 98 2-101 558-681 (823)
23 PHA02878 ankyrin repeat protei 99.8 7E-19 1.5E-23 111.0 9.9 98 2-101 37-194 (477)
24 PHA03095 ankyrin-like protein; 99.8 5.3E-19 1.2E-23 111.2 9.2 93 2-101 222-316 (471)
25 PHA03100 ankyrin repeat protei 99.8 9.4E-19 2E-23 110.3 10.0 92 3-101 216-309 (480)
26 PHA02741 hypothetical protein; 99.8 9.6E-19 2.1E-23 97.3 8.9 91 2-99 60-156 (169)
27 PHA02875 ankyrin repeat protei 99.8 1.8E-18 3.9E-23 107.5 10.2 93 1-100 1-127 (413)
28 PHA02859 ankyrin repeat protei 99.8 3E-18 6.6E-23 98.2 9.9 91 3-100 52-150 (209)
29 PF13637 Ank_4: Ankyrin repeat 99.8 1.3E-18 2.7E-23 80.0 6.3 54 37-95 1-54 (54)
30 PHA03100 ankyrin repeat protei 99.8 1.7E-18 3.6E-23 109.2 9.0 92 3-101 107-202 (480)
31 PLN03192 Voltage-dependent pot 99.8 3.2E-18 6.8E-23 113.7 9.8 89 3-98 526-614 (823)
32 PHA03095 ankyrin-like protein; 99.8 3.3E-18 7.2E-23 107.6 9.4 93 2-101 47-145 (471)
33 KOG0515 p53-interacting protei 99.8 1.3E-18 2.8E-23 108.3 7.3 89 6-101 554-642 (752)
34 PHA02859 ankyrin repeat protei 99.8 7.8E-18 1.7E-22 96.5 9.8 92 3-101 88-185 (209)
35 PHA02874 ankyrin repeat protei 99.8 6.5E-18 1.4E-22 105.6 10.1 94 3-101 69-183 (434)
36 KOG0502 Integral membrane anky 99.8 9.4E-19 2E-23 98.8 5.2 95 1-102 159-253 (296)
37 KOG4177 Ankyrin [Cell wall/mem 99.8 2.3E-18 5.1E-23 115.1 7.5 91 3-100 541-631 (1143)
38 PTZ00322 6-phosphofructo-2-kin 99.8 1.3E-17 2.8E-22 108.7 10.1 87 4-97 84-170 (664)
39 PHA02946 ankyin-like protein; 99.8 1.4E-17 3E-22 104.5 9.8 91 4-101 39-133 (446)
40 KOG0512 Fetal globin-inducing 99.8 5.4E-18 1.2E-22 92.7 6.7 87 3-96 98-185 (228)
41 PHA02798 ankyrin-like protein; 99.7 1.5E-17 3.2E-22 105.4 8.6 92 3-101 72-174 (489)
42 KOG0510 Ankyrin repeat protein 99.7 1.1E-17 2.3E-22 108.1 7.9 96 2-102 273-368 (929)
43 KOG0508 Ankyrin repeat protein 99.7 4.3E-18 9.4E-23 104.8 5.5 93 3-102 85-177 (615)
44 PHA02884 ankyrin repeat protei 99.7 3.5E-17 7.6E-22 97.7 9.2 86 2-94 70-156 (300)
45 PHA02736 Viral ankyrin protein 99.7 1.4E-17 3.1E-22 91.3 7.0 94 2-100 17-118 (154)
46 PHA02876 ankyrin repeat protei 99.7 3.7E-17 8E-22 106.9 9.7 92 3-101 376-469 (682)
47 PHA02946 ankyin-like protein; 99.7 4.1E-17 9E-22 102.3 9.4 90 2-99 72-164 (446)
48 PHA02989 ankyrin repeat protei 99.7 6.9E-17 1.5E-21 102.5 9.8 66 30-100 249-314 (494)
49 KOG4177 Ankyrin [Cell wall/mem 99.7 2.1E-17 4.6E-22 110.7 7.7 92 3-101 508-599 (1143)
50 PF13857 Ank_5: Ankyrin repeat 99.7 8.1E-18 1.7E-22 77.7 4.0 55 22-82 2-56 (56)
51 PHA02716 CPXV016; CPX019; EVM0 99.7 8.6E-17 1.9E-21 105.3 8.7 92 3-101 213-345 (764)
52 PHA02716 CPXV016; CPX019; EVM0 99.7 2.6E-16 5.6E-21 103.1 9.9 74 3-83 178-255 (764)
53 KOG0514 Ankyrin repeat protein 99.7 2.1E-17 4.4E-22 99.1 4.3 57 36-97 339-395 (452)
54 PHA02876 ankyrin repeat protei 99.7 3.8E-16 8.3E-21 102.2 10.0 91 4-101 147-237 (682)
55 cd00204 ANK ankyrin repeats; 99.7 1.7E-15 3.7E-20 79.6 9.8 90 3-99 8-97 (126)
56 PHA02989 ankyrin repeat protei 99.7 6.4E-16 1.4E-20 98.1 9.3 92 3-101 70-173 (494)
57 PHA02798 ankyrin-like protein; 99.7 6.7E-16 1.5E-20 97.9 9.4 68 29-101 250-317 (489)
58 PHA02917 ankyrin-like protein; 99.7 6.9E-16 1.5E-20 100.5 9.3 93 2-101 32-164 (661)
59 PHA02730 ankyrin-like protein; 99.7 1.2E-15 2.6E-20 98.7 9.5 94 3-101 379-488 (672)
60 PHA02795 ankyrin-like protein; 99.7 9.3E-16 2E-20 95.2 8.6 92 4-101 151-247 (437)
61 KOG0505 Myosin phosphatase, re 99.7 2.7E-16 5.9E-21 97.7 6.2 89 6-101 44-132 (527)
62 KOG0514 Ankyrin repeat protein 99.7 6.3E-16 1.4E-20 92.8 7.4 89 3-97 341-429 (452)
63 PHA02917 ankyrin-like protein; 99.7 1.6E-15 3.4E-20 98.9 9.7 80 15-101 432-512 (661)
64 PF13637 Ank_4: Ankyrin repeat 99.7 7.8E-16 1.7E-20 70.6 5.9 53 3-57 2-54 (54)
65 KOG0502 Integral membrane anky 99.6 9.5E-16 2.1E-20 86.9 6.4 91 2-101 129-219 (296)
66 PHA02730 ankyrin-like protein; 99.6 3.9E-15 8.4E-20 96.4 9.4 90 2-96 41-137 (672)
67 COG0666 Arp FOG: Ankyrin repea 99.6 7.2E-15 1.6E-19 84.1 9.3 92 3-101 74-173 (235)
68 PF12796 Ank_2: Ankyrin repeat 99.6 3.1E-15 6.8E-20 75.1 6.1 63 3-72 27-89 (89)
69 KOG0507 CASK-interacting adapt 99.6 1.2E-15 2.5E-20 98.3 5.2 92 2-100 49-140 (854)
70 KOG4214 Myotrophin and similar 99.6 2.7E-15 5.8E-20 74.4 5.1 75 2-83 34-108 (117)
71 KOG0505 Myosin phosphatase, re 99.6 2.2E-15 4.8E-20 93.7 5.7 87 3-96 74-160 (527)
72 PHA02792 ankyrin-like protein; 99.6 1.7E-14 3.7E-19 92.7 9.5 92 3-101 340-436 (631)
73 KOG1710 MYND Zn-finger and ank 99.6 3.8E-14 8.3E-19 83.2 8.7 91 3-100 13-104 (396)
74 PHA02792 ankyrin-like protein; 99.5 4.6E-14 9.9E-19 90.8 8.6 92 3-101 375-479 (631)
75 KOG0195 Integrin-linked kinase 99.5 1.2E-14 2.7E-19 85.5 5.4 76 2-84 67-142 (448)
76 TIGR00870 trp transient-recept 99.5 2.8E-14 6.1E-19 94.4 7.1 78 2-86 128-219 (743)
77 TIGR00870 trp transient-recept 99.5 7.9E-14 1.7E-18 92.3 9.1 99 3-101 18-154 (743)
78 cd00204 ANK ankyrin repeats; 99.5 2E-13 4.3E-18 71.7 8.9 86 3-95 41-126 (126)
79 COG0666 Arp FOG: Ankyrin repea 99.5 8.1E-14 1.8E-18 79.8 7.8 92 2-98 106-203 (235)
80 KOG0507 CASK-interacting adapt 99.5 2.4E-14 5.2E-19 92.4 4.3 88 3-97 83-170 (854)
81 KOG3676 Ca2+-permeable cation 99.5 1.5E-13 3.3E-18 89.1 7.3 89 2-97 240-330 (782)
82 KOG0818 GTPase-activating prot 99.5 2.8E-13 6.1E-18 84.3 7.0 87 4-97 135-222 (669)
83 KOG0515 p53-interacting protei 99.4 3E-13 6.5E-18 84.9 6.2 87 3-96 584-673 (752)
84 KOG0506 Glutaminase (contains 99.4 1.7E-13 3.6E-18 84.9 4.9 88 4-97 508-595 (622)
85 KOG0705 GTPase-activating prot 99.4 3.7E-12 8E-17 80.7 8.1 90 4-98 626-717 (749)
86 KOG3676 Ca2+-permeable cation 99.4 3.4E-12 7.3E-17 83.1 7.9 91 3-100 185-298 (782)
87 KOG1710 MYND Zn-finger and ank 99.4 6.7E-12 1.5E-16 74.0 8.0 89 3-97 46-134 (396)
88 KOG0522 Ankyrin repeat protein 99.4 3.1E-12 6.7E-17 80.1 6.9 88 5-97 23-110 (560)
89 PF13857 Ank_5: Ankyrin repeat 99.3 1E-11 2.2E-16 57.2 4.2 40 3-44 17-56 (56)
90 PF13606 Ank_3: Ankyrin repeat 99.3 9.6E-12 2.1E-16 50.1 3.5 28 74-101 1-28 (30)
91 PTZ00322 6-phosphofructo-2-kin 99.2 5.2E-11 1.1E-15 78.3 6.4 80 2-83 115-196 (664)
92 PF13606 Ank_3: Ankyrin repeat 99.2 6.8E-11 1.5E-15 47.6 3.2 25 36-60 1-25 (30)
93 KOG0783 Uncharacterized conser 99.1 3.4E-11 7.4E-16 79.3 3.5 75 3-84 53-128 (1267)
94 PF00023 Ank: Ankyrin repeat H 99.1 1.1E-10 2.4E-15 48.0 3.7 24 37-60 2-25 (33)
95 PF00023 Ank: Ankyrin repeat H 99.1 1.3E-10 2.8E-15 47.8 3.7 28 74-101 1-28 (33)
96 KOG0782 Predicted diacylglycer 99.1 3.5E-10 7.6E-15 72.3 7.2 90 3-97 900-989 (1004)
97 KOG0783 Uncharacterized conser 99.1 2E-10 4.2E-15 75.9 4.5 80 17-101 32-112 (1267)
98 KOG0782 Predicted diacylglycer 99.0 1.1E-09 2.4E-14 70.1 6.3 94 4-102 868-961 (1004)
99 KOG4369 RTK signaling protein 98.9 5.3E-10 1.2E-14 76.1 2.3 88 4-98 759-847 (2131)
100 KOG3609 Receptor-activated Ca2 98.9 8.8E-09 1.9E-13 68.0 6.8 99 3-101 26-157 (822)
101 KOG4369 RTK signaling protein 98.8 2.5E-09 5.5E-14 73.0 3.2 94 3-102 791-884 (2131)
102 KOG0511 Ankyrin repeat protein 98.8 2.8E-08 6.2E-13 60.9 6.6 56 3-60 37-92 (516)
103 KOG0511 Ankyrin repeat protein 98.7 7.2E-08 1.6E-12 59.2 5.5 57 38-99 37-93 (516)
104 KOG2384 Major histocompatibili 98.6 1.3E-07 2.9E-12 53.0 5.1 66 28-97 3-68 (223)
105 KOG0521 Putative GTPase activa 98.6 8.6E-08 1.9E-12 64.2 4.4 82 2-90 656-737 (785)
106 KOG0520 Uncharacterized conser 98.5 4.2E-08 9.2E-13 66.1 2.3 34 66-99 632-665 (975)
107 KOG0522 Ankyrin repeat protein 98.5 3.3E-07 7.1E-12 58.3 5.7 56 3-60 56-111 (560)
108 KOG0705 GTPase-activating prot 98.4 1E-06 2.2E-11 56.8 5.3 56 3-60 662-717 (749)
109 KOG0520 Uncharacterized conser 98.2 5.6E-07 1.2E-11 60.9 1.8 87 10-97 615-702 (975)
110 KOG0521 Putative GTPase activa 98.2 1.7E-06 3.6E-11 58.3 3.3 62 34-100 653-714 (785)
111 KOG0506 Glutaminase (contains 98.2 1.1E-06 2.4E-11 55.5 2.0 58 2-60 539-596 (622)
112 smart00248 ANK ankyrin repeats 98.1 9.5E-06 2E-10 31.1 3.5 26 75-100 2-27 (30)
113 KOG0818 GTPase-activating prot 98.0 2.2E-05 4.8E-10 50.2 5.0 56 3-60 168-223 (669)
114 KOG2505 Ankyrin repeat protein 97.9 3.6E-05 7.8E-10 49.2 5.2 46 34-84 427-472 (591)
115 KOG2384 Major histocompatibili 97.7 0.0002 4.3E-09 40.7 5.7 58 1-60 11-69 (223)
116 smart00248 ANK ankyrin repeats 97.7 0.00011 2.3E-09 27.9 3.2 25 36-60 1-25 (30)
117 KOG3609 Receptor-activated Ca2 96.8 0.0055 1.2E-07 41.9 5.7 59 3-61 89-155 (822)
118 KOG2505 Ankyrin repeat protein 96.8 0.0012 2.7E-08 42.5 2.6 41 3-45 431-471 (591)
119 PF06128 Shigella_OspC: Shigel 95.8 0.089 1.9E-06 31.2 6.3 93 3-100 180-279 (284)
120 PF11929 DUF3447: Domain of un 94.4 0.19 4.1E-06 24.3 4.4 21 39-59 34-54 (76)
121 PF11929 DUF3447: Domain of un 92.0 0.77 1.7E-05 22.2 4.9 47 39-97 8-54 (76)
122 PF03158 DUF249: Multigene fam 89.8 1.2 2.7E-05 25.6 4.3 45 41-96 147-191 (192)
123 PF06128 Shigella_OspC: Shigel 86.8 2.3 4.9E-05 25.6 4.2 47 13-60 228-277 (284)
124 PF03158 DUF249: Multigene fam 85.5 3.3 7.2E-05 24.0 4.4 45 6-58 147-191 (192)
125 KOG1709 Guanidinoacetate methy 78.4 1.8 3.9E-05 25.9 1.7 32 29-60 7-38 (271)
126 PF12645 HTH_16: Helix-turn-he 63.8 14 0.0003 17.4 2.6 23 5-27 2-24 (65)
127 PF05476 PET122: PET122; Inte 58.8 27 0.0006 21.5 3.8 55 3-60 14-69 (267)
128 KOG4591 Uncharacterized conser 55.7 15 0.00031 21.9 2.3 53 33-86 218-271 (280)
129 KOG4335 FERM domain-containing 54.4 8.8 0.00019 25.9 1.4 67 12-83 153-219 (558)
130 KOG3836 HLH transcription fact 52.9 2.7 5.8E-05 28.7 -1.0 33 28-60 420-452 (605)
131 PF08898 DUF1843: Domain of un 51.6 24 0.00052 16.0 2.7 21 4-24 5-25 (53)
132 COG1732 OpuBC Periplasmic glyc 49.6 21 0.00046 22.4 2.5 36 16-52 50-86 (300)
133 PRK10548 flagellar biosynthesi 43.7 42 0.00091 18.1 2.8 20 5-24 20-39 (121)
134 PF12854 PPR_1: PPR repeat 39.2 30 0.00066 13.6 2.6 19 6-24 14-32 (34)
135 PF12997 DUF3881: Domain of un 34.5 42 0.00091 21.0 2.1 23 2-24 166-188 (283)
136 TIGR02957 SigX4 RNA polymerase 34.1 52 0.0011 20.2 2.5 52 4-58 171-222 (281)
137 KOG4032 Uncharacterized conser 31.4 77 0.0017 18.5 2.7 22 5-26 96-117 (184)
138 PF04840 Vps16_C: Vps16, C-ter 29.9 1.5E+02 0.0033 18.9 5.1 53 7-59 8-64 (319)
139 KOG2658 NADH:ubiquinone oxidor 29.1 47 0.001 21.7 1.7 29 4-32 66-94 (478)
140 PF05396 Phage_T7_Capsid: Phag 27.8 73 0.0016 17.3 2.1 24 36-59 62-85 (123)
141 PF09722 DUF2384: Protein of u 24.6 80 0.0017 13.9 1.9 10 74-83 26-35 (54)
142 smart00668 CTLH C-terminal to 23.0 85 0.0019 13.6 2.9 24 2-25 4-27 (58)
143 PF12921 ATP13: Mitochondrial 21.2 1.5E+02 0.0033 15.9 2.9 28 4-31 7-34 (126)
144 COG1554 ATH1 Trehalose and mal 21.0 2.2E+02 0.0048 20.9 3.8 43 44-91 647-691 (772)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=5.4e-26 Score=124.25 Aligned_cols=91 Identities=23% Similarity=0.281 Sum_probs=51.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHH-hCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEI-MGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
|+|||.||..|+.+++.+|++. ++..++-+|..||||||+|+..|+.++++.|+.+ + ++++..++.|.||||+
T Consensus 39 Rt~LHwa~S~g~~eiv~fLlsq-~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~-----advna~tn~G~T~LHy 112 (226)
T KOG4412|consen 39 RTPLHWACSFGHVEIVYFLLSQ-PNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSG-----ADVNATTNGGQTCLHY 112 (226)
T ss_pred CceeeeeeecCchhHHHHHHhc-CCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCC-----CCcceecCCCcceehh
Confidence 4555666666666555555542 3444555555566666666665555555555555 3 5555555555555555
Q ss_pred HHHhCCHHHHHHHHhcCc
Q 038143 82 AAALGNEAMCHCMASKDR 99 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~ 99 (103)
|+.+|..|++.+|++.|+
T Consensus 113 AagK~r~eIaqlLle~ga 130 (226)
T KOG4412|consen 113 AAGKGRLEIAQLLLEKGA 130 (226)
T ss_pred hhcCChhhHHHHHHhcCC
Confidence 555555555555555553
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=2.2e-24 Score=118.02 Aligned_cols=94 Identities=26% Similarity=0.322 Sum_probs=84.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.++|||+|+..|+.+.|+.|+.+ ++.+++..+..|.|+||+|+.+|..+++++|++.| +.++.+|..|+||||-
T Consensus 72 GWtPlhia~s~g~~evVk~Ll~r-~~advna~tn~G~T~LHyAagK~r~eIaqlLle~g-----a~i~~kD~~~qtplHR 145 (226)
T KOG4412|consen 72 GWTPLHIAASNGNDEVVKELLNR-SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKG-----ALIRIKDKQGQTPLHR 145 (226)
T ss_pred CCchhhhhhhcCcHHHHHHHhcC-CCCCcceecCCCcceehhhhcCChhhHHHHHHhcC-----CCCcccccccCchhHH
Confidence 36899999999999999999987 36778888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|..+++++|+..++.+
T Consensus 146 AAavGklkvie~Li~~~a~~ 165 (226)
T KOG4412|consen 146 AAAVGKLKVIEYLISQGAPL 165 (226)
T ss_pred HHhccchhhHHHHHhcCCCC
Confidence 99999999999999988654
No 3
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.90 E-value=1e-22 Score=102.49 Aligned_cols=85 Identities=29% Similarity=0.359 Sum_probs=76.3
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHh
Q 038143 6 LSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAAL 85 (103)
Q Consensus 6 l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 85 (103)
||.|+..|+.+.++.+++.+ ...+. |.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..
T Consensus 1 L~~A~~~~~~~~~~~ll~~~--~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG--ADINL----GNTALHYAAENGNLEIVKLLLENG-----ADINSQDKNGNTALHYAAEN 69 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT--STTTS----SSBHHHHHHHTTTHHHHHHHHHTT-----TCTT-BSTTSSBHHHHHHHT
T ss_pred CHHHHHcCCHHHHHHHHHCc--CCCCC----CCCHHHHHHHcCCHHHHHHHHHhc-----ccccccCCCCCCHHHHHHHc
Confidence 79999999999999999984 33333 899999999999999999999998 88999999999999999999
Q ss_pred CCHHHHHHHHhcCccc
Q 038143 86 GNEAMCHCMASKDREL 101 (103)
Q Consensus 86 ~~~~~~~~l~~~~~~l 101 (103)
|+.+++++|++.|+++
T Consensus 70 ~~~~~~~~Ll~~g~~~ 85 (89)
T PF12796_consen 70 GNLEIVKLLLEHGADV 85 (89)
T ss_dssp THHHHHHHHHHTTT-T
T ss_pred CCHHHHHHHHHcCCCC
Confidence 9999999999998875
No 4
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.85 E-value=8.6e-21 Score=117.73 Aligned_cols=92 Identities=17% Similarity=0.210 Sum_probs=74.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|++. +++++..+..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~--gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g-----~~~~~~d~~g~TpL~~A 175 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIAR--GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-----ACLDIEDCCGCTPLIIA 175 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcC-----CCCCCCCCCCCCHHHHH
Confidence 4688888888888888888877 5667777778888888888888888888888877 77778888888888888
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 176 ~~~g~~eiv~~Ll~~ga~~ 194 (413)
T PHA02875 176 MAKGDIAICKMLLDSGANI 194 (413)
T ss_pred HHcCCHHHHHHHHhCCCCC
Confidence 8888888888888887654
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.85 E-value=1.3e-20 Score=111.90 Aligned_cols=55 Identities=18% Similarity=0.103 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
+|||.|+..|+.+.++.|+.. +.+.+..|..|+||||+|+..|+.+++++|++.+
T Consensus 63 TpLh~Aa~~g~~eiV~lLL~~--Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~g 117 (284)
T PHA02791 63 FPLHQAATLEDTKIVKILLFS--GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 117 (284)
T ss_pred CHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 455555555555555555544 3344444555555555555555555555555544
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.85 E-value=1.7e-20 Score=111.39 Aligned_cols=91 Identities=21% Similarity=0.133 Sum_probs=81.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||+|+..|+.+.++.++.. +.+.+.. .|.||||+|+..|+.+++++|+..+ ++++.+|..|.||||+
T Consensus 30 G~TpLh~Aa~~g~~eiv~~Ll~~--ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~G-----advn~~d~~G~TpLh~ 100 (284)
T PHA02791 30 GHSALYYAIADNNVRLVCTLLNA--GALKNLL--ENEFPLHQAATLEDTKIVKILLFSG-----MDDSQFDDKGNTALYY 100 (284)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHC--cCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHH
Confidence 36899999999999999999998 4445443 4789999999999999999999988 8889999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 101 Aa~~g~~eivk~Ll~~gadi 120 (284)
T PHA02791 101 AVDSGNMQTVKLFVKKNWRL 120 (284)
T ss_pred HHHcCCHHHHHHHHHCCCCc
Confidence 99999999999999998765
No 7
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.84 E-value=2.9e-20 Score=103.16 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=55.2
Q ss_pred hHHHHHHHHhCCHHH---HHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHH-HhCcccccccccccCCCCc
Q 038143 3 VNCLSKFAMTGQWDN---IVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVE-IMGENASNVLKIQNDRGDT 77 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~---v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~g~t 77 (103)
++|||+|+..|..+. ++.|+.. +.+++..+ ..|.||||+|+..++.+++++|+. .+ .+++.++..|.|
T Consensus 58 ~t~Lh~Aa~~g~~~~~~~i~~Ll~~--Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~g~t 130 (166)
T PHA02743 58 RQCTHMVAWYDRANAVMKIELLVNM--GADINARELGTGNTLLHIAASTKNYELAEWLCRQLG-----VNLGAINYQHET 130 (166)
T ss_pred CcHHHHHHHhCccCHHHHHHHHHHc--CCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC-----CCccCcCCCCCC
Confidence 456666666665433 4455555 44555555 356666666666666666666663 44 556666666666
Q ss_pred HHHHHHHhCCHHHHHHHHhcCcc
Q 038143 78 AFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 78 pl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
|||+|+..++.+++++|++.+++
T Consensus 131 pL~~A~~~~~~~iv~~Ll~~ga~ 153 (166)
T PHA02743 131 AYHIAYKMRDRRMMEILRANGAV 153 (166)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC
Confidence 66666666666666666666544
No 8
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.84 E-value=3e-20 Score=91.82 Aligned_cols=91 Identities=20% Similarity=0.192 Sum_probs=82.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
-..+.+++.+|..+.|++.+.+ +.+++.. ..|++|||+|+-+|..+++++|+..| ++++.+|++|.|||.-|
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~--g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iG-----A~i~~kDKygITPLLsA 74 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNE--GLNVNEI-YGGRTPLHYAADYGQLSILEFLISIG-----ANIQDKDKYGITPLLSA 74 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHc--cccHHHH-hCCcccchHhhhcchHHHHHHHHHhc-----cccCCccccCCcHHHHH
Confidence 3567889999999999999999 5566553 48999999999999999999999999 99999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..||.+++++|++.|++-
T Consensus 75 vwEGH~~cVklLL~~GAdr 93 (117)
T KOG4214|consen 75 VWEGHRDCVKLLLQNGADR 93 (117)
T ss_pred HHHhhHHHHHHHHHcCccc
Confidence 9999999999999998763
No 9
>PHA02741 hypothetical protein; Provisional
Probab=99.83 E-value=9.1e-20 Score=101.42 Aligned_cols=94 Identities=23% Similarity=0.306 Sum_probs=78.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHc----CCCchhhhcCCCCCcHHHHHHHhCC----hhHHHHHHHHhCcccccccccccC
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYEN----NPMSREAKLTRSGDTALHIAAAAGQ----TNIVSELVEIMGENASNVLKIQND 73 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~----~~~~~~~~~~~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~~ 73 (103)
..++||.|+..|+.+.++.++.. ..+.+++..|..|.||||+|+..++ .+++++|+..+ ++++.++.
T Consensus 21 g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-----adin~~~~ 95 (169)
T PHA02741 21 GENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-----ADINAQEM 95 (169)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-----CCCCCCCc
Confidence 35799999999999999887542 1245677889999999999999998 47888999888 88888885
Q ss_pred -CCCcHHHHHHHhCCHHHHHHHHhc-Ccc
Q 038143 74 -RGDTAFHLAAALGNEAMCHCMASK-DRE 100 (103)
Q Consensus 74 -~g~tpl~~a~~~~~~~~~~~l~~~-~~~ 100 (103)
.|.||||+|+..++.+++++|+.. +++
T Consensus 96 ~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~ 124 (169)
T PHA02741 96 LEGDTALHLAAHRRDHDLAEWLCCQPGID 124 (169)
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 899999999999999999999874 544
No 10
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.83 E-value=2.5e-20 Score=117.10 Aligned_cols=92 Identities=20% Similarity=0.183 Sum_probs=59.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
+.+|||.|+++|+...|..|+++ |++++..|.+|.+|||+|++.++..++-+++..+ .+++.+|..|+|||||
T Consensus 112 ~stPLHWAar~G~~~vv~lLlqh--GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~-----~d~d~~D~~grTpLmw 184 (600)
T KOG0509|consen 112 GSTPLHWAARNGHISVVDLLLQH--GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG-----ADIDLRDNNGRTPLMW 184 (600)
T ss_pred CCCcchHHHHcCcHHHHHHHHHc--CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc-----ccCCCcCCCCCCHHHH
Confidence 34566666666666666666666 5556666666666666666666666666666665 6666666666666666
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
|+.+|+...++.|+..++.
T Consensus 185 Aaykg~~~~v~~LL~f~a~ 203 (600)
T KOG0509|consen 185 AAYKGFALFVRRLLKFGAS 203 (600)
T ss_pred HHHhcccHHHHHHHHhccc
Confidence 6666666556666665554
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.83 E-value=7e-20 Score=115.51 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=85.8
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.++.. +.+++..+..|.||||+|+..++.+++++|++.| ++++.+|..|.||||+
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~--gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-----a~in~~d~~g~TpLh~ 240 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSY--GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG-----ASTDARDKCGNTPLHI 240 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHH
Confidence 46899999999999999999998 6678888999999999999999999999999998 8899999999999999
Q ss_pred HHHh-CCHHHHHHHHhcCccc
Q 038143 82 AAAL-GNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~-~~~~~~~~l~~~~~~l 101 (103)
|+.. ++.+++++|+++|+++
T Consensus 241 A~~~~~~~~iv~~Ll~~gadv 261 (477)
T PHA02878 241 SVGYCKDYDILKLLLEHGVDV 261 (477)
T ss_pred HHHhcCCHHHHHHHHHcCCCC
Confidence 9976 6899999999998764
No 12
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.83 E-value=7.9e-20 Score=114.15 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=86.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.|+.. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.++..|.||||+
T Consensus 124 g~T~Lh~A~~~~~~~~v~~Ll~~--gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-----~~~n~~~~~g~tpL~~ 196 (434)
T PHA02874 124 LKTFLHYAIKKGDLESIKMLFEY--GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG-----AYANVKDNNGESPLHN 196 (434)
T ss_pred CccHHHHHHHCCCHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-----CCCCCCCCCCCCHHHH
Confidence 35899999999999999999998 6678888999999999999999999999999998 8888999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 197 A~~~g~~~iv~~Ll~~g~~i 216 (434)
T PHA02874 197 AAEYGDYACIKLLIDHGNHI 216 (434)
T ss_pred HHHcCCHHHHHHHHhCCCCC
Confidence 99999999999999998764
No 13
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.83 E-value=6.4e-20 Score=100.15 Aligned_cols=90 Identities=19% Similarity=0.153 Sum_probs=81.2
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHh
Q 038143 6 LSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAAL 85 (103)
Q Consensus 6 l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 85 (103)
+..|+..+....|+.+|+..+.. ++.+|..|.||||.|+..|+.++++.|+..| +++..+...|+||||-|+..
T Consensus 67 ~lwaae~nrl~eV~~lL~e~an~-vNtrD~D~YTpLHRAaYn~h~div~~ll~~g-----An~~a~T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 67 LLWAAEKNRLTEVQRLLSEKANH-VNTRDEDEYTPLHRAAYNGHLDIVHELLLSG-----ANKEAKTNEGWTPLHSACKW 140 (228)
T ss_pred HHHHHhhccHHHHHHHHHhcccc-ccccccccccHHHHHHhcCchHHHHHHHHcc-----CCcccccccCccchhhhhcc
Confidence 56788999999999999886543 7889999999999999999999999999988 88999999999999999999
Q ss_pred CCHHHHHHHHhcCccc
Q 038143 86 GNEAMCHCMASKDREL 101 (103)
Q Consensus 86 ~~~~~~~~l~~~~~~l 101 (103)
.+.+++.+|+++|+++
T Consensus 141 nN~~va~~LLqhgaDV 156 (228)
T KOG0512|consen 141 NNFEVAGRLLQHGADV 156 (228)
T ss_pred cchhHHHHHHhccCcc
Confidence 9999999999999875
No 14
>PHA02795 ankyrin-like protein; Provisional
Probab=99.82 E-value=1.6e-19 Score=111.67 Aligned_cols=93 Identities=16% Similarity=0.075 Sum_probs=84.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
+.+++|.|...+..+.++.++.. +++++.+|..|.||||+|+..|+.+++++|++.| ++++.+|..|.||||+
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~--GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G-----AdIN~~d~~G~TpLh~ 260 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPY--IEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG-----ANVNAVMSNGYTCLDV 260 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhC--cCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHH
Confidence 34677888888999999999988 6788889999999999999999999999999999 9999999999999999
Q ss_pred HHHhC--------CHHHHHHHHhcCccc
Q 038143 82 AAALG--------NEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~--------~~~~~~~l~~~~~~l 101 (103)
|+..| +.+++++|+++++++
T Consensus 261 Aa~~g~~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 261 AVDRGSVIARRETHLKILEILLREPLSI 288 (437)
T ss_pred HHHcCCcccccccHHHHHHHHHhCCCCC
Confidence 99988 469999999998864
No 15
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.81 E-value=2.7e-20 Score=114.34 Aligned_cols=92 Identities=21% Similarity=0.265 Sum_probs=85.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+||-.||..|+++.|+.++++ +++++..++.|.|.|++||.+|+.+++++|++.| ++++.++..|+|+||.+
T Consensus 118 StPLraACfDG~leivKyLvE~--gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~g-----ADvn~ks~kGNTALH~c 190 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEH--GADPEIANRHGHTCLMIACYKGHVDIAQYLLEQG-----ADVNAKSYKGNTALHDC 190 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHc--CCCCcccccCCCeeEEeeeccCchHHHHHHHHhC-----CCcchhcccCchHHHhh
Confidence 3789999999999999999988 7888899999999999999999999999999998 99999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|+.+++.+
T Consensus 191 aEsG~vdivq~Ll~~ga~i 209 (615)
T KOG0508|consen 191 AESGSVDIVQLLLKHGAKI 209 (615)
T ss_pred hhcccHHHHHHHHhCCcee
Confidence 9999999999999988754
No 16
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81 E-value=4.1e-19 Score=98.54 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=77.1
Q ss_pred chHHHHHHHHhCCHHHHHH----HHHcCCCchhhhcCCCCCcHHHHHHHhCChhH---HHHHHHHhCccccccccccc-C
Q 038143 2 EVNCLSKFAMTGQWDNIVQ----AYENNPMSREAKLTRSGDTALHIAAAAGQTNI---VSELVEIMGENASNVLKIQN-D 73 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~----ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~---~~~ll~~~~~~~~~~~~~~~-~ 73 (103)
+.++||.|+..|+.+.+.. ++.. +..++..|..|+||||+|+..++.+. +++|+..+ ++++.++ .
T Consensus 20 ~~~~l~~a~~~g~~~~l~~~~~~l~~~--g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-----adin~~d~~ 92 (166)
T PHA02743 20 EQNTFLRICRTGNIYELMEVAPFISGD--GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-----ADINARELG 92 (166)
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHhhc--chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-----CCCCCCCCC
Confidence 3568999999999865554 3344 55677889999999999999988654 88999998 8899998 5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHh-cCccc
Q 038143 74 RGDTAFHLAAALGNEAMCHCMAS-KDREL 101 (103)
Q Consensus 74 ~g~tpl~~a~~~~~~~~~~~l~~-~~~~l 101 (103)
.|.||||+|+..++.+++++|+. .++++
T Consensus 93 ~g~TpLh~A~~~g~~~iv~~Ll~~~gad~ 121 (166)
T PHA02743 93 TGNTLLHIAASTKNYELAEWLCRQLGVNL 121 (166)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhccCCCc
Confidence 89999999999999999999995 56543
No 17
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.81 E-value=9.3e-20 Score=117.38 Aligned_cols=95 Identities=24% Similarity=0.325 Sum_probs=80.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccc---cccCCCCcH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLK---IQNDRGDTA 78 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~---~~~~~g~tp 78 (103)
+.+|||.|+++|++++|++||+...-...+..|..|.||||+|++.||..+++.|++.| +... ..|.+|.||
T Consensus 306 ~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~G-----A~~~~~~e~D~dg~Ta 380 (929)
T KOG0510|consen 306 EESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKG-----ALFLNMSEADSDGNTA 380 (929)
T ss_pred CCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcC-----hhhhcccccccCCchh
Confidence 46899999999999999999983222456677889999999999999999999999988 4433 458999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCccc
Q 038143 79 FHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~l 101 (103)
||.|++.|+..++++|+.+|+++
T Consensus 381 LH~Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 381 LHLAAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred hhHHHHhccHHHHHHHHHcCCce
Confidence 99999999999999999999886
No 18
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.1e-19 Score=106.35 Aligned_cols=92 Identities=24% Similarity=0.286 Sum_probs=86.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
++|||.|++.|+...++.++.. +..++..+....||||+|+..|+.++++.|+.+. ++++..|..|+||||+|
T Consensus 35 fsplhwaakegh~aivemll~r--garvn~tnmgddtplhlaaahghrdivqkll~~k-----advnavnehgntplhya 107 (448)
T KOG0195|consen 35 FSPLHWAAKEGHVAIVEMLLSR--GARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRK-----ADVNAVNEHGNTPLHYA 107 (448)
T ss_pred cchhhhhhhcccHHHHHHHHhc--ccccccccCCCCcchhhhhhcccHHHHHHHHHHh-----cccchhhccCCCchhhh
Confidence 6899999999999999999999 7778888888899999999999999999999998 99999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
|..|...+.+-|++.|+.+
T Consensus 108 cfwgydqiaedli~~ga~v 126 (448)
T KOG0195|consen 108 CFWGYDQIAEDLISCGAAV 126 (448)
T ss_pred hhhcHHHHHHHHHhcccee
Confidence 9999999999999988754
No 19
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.81 E-value=6e-19 Score=105.17 Aligned_cols=91 Identities=12% Similarity=-0.014 Sum_probs=79.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhc----CCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccc-cCCCCcH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKL----TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQ-NDRGDTA 78 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~----~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~g~tp 78 (103)
++|+.|+..|+.+.++.|++. |++++.+ +..|.||||+|+..++.+++++|++.| ++++.+ +..|.||
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~--GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~G-----ADVN~~~~~~g~Tp 107 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKL--GADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYG-----ADVNRYAEEAKITP 107 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHC--CCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcCcccCCCCCCH
Confidence 467778888999999999999 6666665 458999999999999999999999998 888886 4679999
Q ss_pred HHHHHHhCCHHHHHHHHhcCccc
Q 038143 79 FHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~l 101 (103)
||+|+..++.+++++|++.|+++
T Consensus 108 Lh~Aa~~~~~eivklLL~~GAdi 130 (300)
T PHA02884 108 LYISVLHGCLKCLEILLSYGADI 130 (300)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999998764
No 20
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.81 E-value=1.2e-19 Score=114.11 Aligned_cols=87 Identities=25% Similarity=0.288 Sum_probs=44.5
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 5 CLSKFAMTGQWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
.||.|+.+++++.++.++++ +++++..+ .-+.||||+|+++|+..+++.|+++| ++++.+|..|.+|+|+|+
T Consensus 81 lLHWAAiNNrl~v~r~li~~--gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhG-----Adpt~~D~~G~~~lHla~ 153 (600)
T KOG0509|consen 81 LLHWAAINNRLDVARYLISH--GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHG-----ADPTLKDKQGLTPLHLAA 153 (600)
T ss_pred ceeHHHHcCcHHHHHHHHHc--CCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcC-----CCCceecCCCCcHHHHHH
Confidence 44555555555555555555 33344433 34445555555555555555555555 555555555555555555
Q ss_pred HhCCHHHHHHHHhcC
Q 038143 84 ALGNEAMCHCMASKD 98 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~ 98 (103)
..|+.-++-+|+..+
T Consensus 154 ~~~~~~~vayll~~~ 168 (600)
T KOG0509|consen 154 QFGHTALVAYLLSKG 168 (600)
T ss_pred HhCchHHHHHHHHhc
Confidence 555555555555443
No 21
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=9.3e-20 Score=100.01 Aligned_cols=91 Identities=18% Similarity=0.146 Sum_probs=75.5
Q ss_pred hHHHHHHHHhCCHH---HHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHH-hCcccccccccccCCCCc
Q 038143 3 VNCLSKFAMTGQWD---NIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEI-MGENASNVLKIQNDRGDT 77 (103)
Q Consensus 3 ~~~l~~a~~~g~~~---~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~g~t 77 (103)
.+|||.|+..|+.+ .++.++.. +.+++..+ ..|.||||+|+..++.+++++|+.. + .+++.+|..|.|
T Consensus 56 ~t~Lh~a~~~~~~~~~e~v~~Ll~~--gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g-----~d~n~~~~~g~t 128 (154)
T PHA02736 56 KQCVHIVSNPDKADPQEKLKLLMEW--GADINGKERVFGNTPLHIAVYTQNYELATWLCNQPG-----VNMEILNYAFKT 128 (154)
T ss_pred CEEEEeecccCchhHHHHHHHHHHc--CCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCC-----CCCccccCCCCC
Confidence 45677777777654 45666777 56677777 4899999999999999999999974 6 788899999999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCcc
Q 038143 78 AFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 78 pl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
|||+|+..|+.+++++|++.|++
T Consensus 129 pL~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 129 PYYVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999998875
No 22
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.80 E-value=4.5e-19 Score=117.67 Aligned_cols=98 Identities=18% Similarity=0.159 Sum_probs=78.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCc-------------------
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGE------------------- 62 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~------------------- 62 (103)
.++|||.|+..|+.++++.|+.. +.+++..|..|+||||+|+..|+.++++.|++.+..
T Consensus 558 G~TpLh~Aa~~g~~~~v~~Ll~~--gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~ 635 (823)
T PLN03192 558 GRTPLHIAASKGYEDCVLVLLKH--ACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDL 635 (823)
T ss_pred CCCHHHHHHHcChHHHHHHHHhc--CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCH
Confidence 36899999999999999999987 677888899999998877776666655554432210
Q ss_pred -------ccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 63 -------NASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 63 -------~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
..+++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 636 ~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv 681 (823)
T PLN03192 636 TAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV 681 (823)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCC
Confidence 122788899999999999999999999999999998875
No 23
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.80 E-value=7e-19 Score=111.01 Aligned_cols=98 Identities=13% Similarity=0.153 Sum_probs=74.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCc-------------------
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGE------------------- 62 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~------------------- 62 (103)
..+|||.|+..|+.+.|+.|++. +++++..|..|+||||+|+..|+.++++.|++.+..
T Consensus 37 ~~tPLh~A~~~g~~e~vk~Ll~~--gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ 114 (477)
T PHA02878 37 PFIPLHQAVEARNLDVVKSLLTR--GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNV 114 (477)
T ss_pred CcchHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCH
Confidence 45789999999999999999988 667888889999999999887776655555443100
Q ss_pred ----------------------------------------ccccccccccCC-CCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 63 ----------------------------------------NASNVLKIQNDR-GDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 63 ----------------------------------------~~~~~~~~~~~~-g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
..+++++.++.. |.||||+|+..|+.+++++|++.|+++
T Consensus 115 ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~ 194 (477)
T PHA02878 115 EIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV 194 (477)
T ss_pred HHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC
Confidence 012455666766 888888888888888888888887754
No 24
>PHA03095 ankyrin-like protein; Provisional
Probab=99.80 E-value=5.3e-19 Score=111.18 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=81.7
Q ss_pred chHHHHHHHHhCCH--HHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHH
Q 038143 2 EVNCLSKFAMTGQW--DNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAF 79 (103)
Q Consensus 2 ~~~~l~~a~~~g~~--~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl 79 (103)
..+|||.|+..|+. ..+..++.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||+
T Consensus 222 g~tpLh~Aa~~~~~~~~~v~~ll~~--g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~g-----ad~n~~~~~g~tpl 294 (471)
T PHA03095 222 GNTPLHSMATGSSCKRSLVLPLLIA--GISINARNRYGQTPLHYAAVFNNPRACRRLIALG-----ADINAVSSDGNTPL 294 (471)
T ss_pred CCCHHHHHHhcCCchHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHH
Confidence 35789999988874 456667777 6778888999999999999999999999999998 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCccc
Q 038143 80 HLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 80 ~~a~~~~~~~~~~~l~~~~~~l 101 (103)
|+|+..|+.++++.|++.++++
T Consensus 295 ~~A~~~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 295 SLMVRNNNGRAVRAALAKNPSA 316 (471)
T ss_pred HHHHHhCCHHHHHHHHHhCCCH
Confidence 9999999999999999988764
No 25
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.80 E-value=9.4e-19 Score=110.34 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=87.1
Q ss_pred hHHHHHHHHhCC--HHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 3 VNCLSKFAMTGQ--WDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 3 ~~~l~~a~~~g~--~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
.+|||.|+..|+ .+.++.+++. +++++.+|..|.||||+|+..++.+++++|++.| ++++.+|..|.||++
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~--g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~g-----ad~n~~d~~g~tpl~ 288 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSY--GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG-----ANPNLVNKYGDTPLH 288 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCcHHH
Confidence 589999999999 9999999998 7778889999999999999999999999999998 899999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCccc
Q 038143 81 LAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|+..++.+++++|++.|+++
T Consensus 289 ~A~~~~~~~iv~~Ll~~g~~i 309 (480)
T PHA03100 289 IAILNNNKEIFKLLLNNGPSI 309 (480)
T ss_pred HHHHhCCHHHHHHHHhcCCCH
Confidence 999999999999999999864
No 26
>PHA02741 hypothetical protein; Provisional
Probab=99.80 E-value=9.6e-19 Score=97.34 Aligned_cols=91 Identities=22% Similarity=0.141 Sum_probs=79.5
Q ss_pred chHHHHHHHHhCC----HHHHHHHHHcCCCchhhhcCC-CCCcHHHHHHHhCChhHHHHHHHH-hCcccccccccccCCC
Q 038143 2 EVNCLSKFAMTGQ----WDNIVQAYENNPMSREAKLTR-SGDTALHIAAAAGQTNIVSELVEI-MGENASNVLKIQNDRG 75 (103)
Q Consensus 2 ~~~~l~~a~~~g~----~~~v~~ll~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~g 75 (103)
..+|||.|+..|+ .+.++.++.. +.+++..+. .|+||||+|+..++.+++++|+.. + .+++..|..|
T Consensus 60 g~T~Lh~A~~~g~~~~~~~ii~~Ll~~--gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g-----~~~~~~n~~g 132 (169)
T PHA02741 60 GQMCIHIAAEKHEAQLAAEIIDHLIEL--GADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPG-----IDLHFCNADN 132 (169)
T ss_pred CCcHHHHHHHcCChHHHHHHHHHHHHc--CCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCC-----CCCCcCCCCC
Confidence 3689999999999 4677777777 666777774 899999999999999999999974 6 7889999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCc
Q 038143 76 DTAFHLAAALGNEAMCHCMASKDR 99 (103)
Q Consensus 76 ~tpl~~a~~~~~~~~~~~l~~~~~ 99 (103)
.||||+|+..++.+++++|++.++
T Consensus 133 ~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 133 KSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHH
Confidence 999999999999999999987643
No 27
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.79 E-value=1.8e-18 Score=107.47 Aligned_cols=93 Identities=14% Similarity=0.167 Sum_probs=68.1
Q ss_pred CchHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccc---------
Q 038143 1 MEVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQ--------- 71 (103)
Q Consensus 1 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~--------- 71 (103)
|++.+|+.|+..|+.+.++.|++. +++++..+..|.||||+|+..++.+++++|++.| +.++..
T Consensus 1 ~~~~~L~~A~~~g~~~iv~~Ll~~--g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~t~L~ 73 (413)
T PHA02875 1 MDQVALCDAILFGELDIARRLLDI--GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHG-----AIPDVKYPDIESELH 73 (413)
T ss_pred CCchHHHHHHHhCCHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCC-----CCccccCCCcccHHH
Confidence 567888888888888888888887 6667777778888888888888888888888887 333333
Q ss_pred -------------------------cCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 72 -------------------------NDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 72 -------------------------~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
+..|.||||+|+..|+.+++++|++.|++
T Consensus 74 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad 127 (413)
T PHA02875 74 DAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGAD 127 (413)
T ss_pred HHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 34456666666666666666666666554
No 28
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.79 E-value=3e-18 Score=98.17 Aligned_cols=91 Identities=11% Similarity=0.039 Sum_probs=53.6
Q ss_pred hHHHHHHHHhC--CHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHh---CChhHHHHHHHHhCcccccccccccCCCC
Q 038143 3 VNCLSKFAMTG--QWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAA---GQTNIVSELVEIMGENASNVLKIQNDRGD 76 (103)
Q Consensus 3 ~~~l~~a~~~g--~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~g~ 76 (103)
.+|||.|+..+ +.+.++.+++. +.+++..+ ..|+||||+|+.. ++.+++++|++.| ++++.+|..|.
T Consensus 52 ~TpLh~a~~~~~~~~eiv~~Ll~~--gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~g-----adin~~d~~G~ 124 (209)
T PHA02859 52 ETPIFSCLEKDKVNVEILKFLIEN--GADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSG-----SSITEEDEDGK 124 (209)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHC--CCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCC-----CCCCCcCCCCC
Confidence 45666666533 56666666666 44555554 3566666665543 2456666666665 56666666666
Q ss_pred cHHHHHHH--hCCHHHHHHHHhcCcc
Q 038143 77 TAFHLAAA--LGNEAMCHCMASKDRE 100 (103)
Q Consensus 77 tpl~~a~~--~~~~~~~~~l~~~~~~ 100 (103)
||||+|+. .++.+++++|++.|++
T Consensus 125 TpLh~a~~~~~~~~~iv~~Li~~gad 150 (209)
T PHA02859 125 NLLHMYMCNFNVRINVIKLLIDSGVS 150 (209)
T ss_pred CHHHHHHHhccCCHHHHHHHHHcCCC
Confidence 66666554 2456666666666554
No 29
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.78 E-value=1.3e-18 Score=79.96 Aligned_cols=54 Identities=35% Similarity=0.461 Sum_probs=43.9
Q ss_pred CCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHH
Q 038143 37 GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMA 95 (103)
Q Consensus 37 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 95 (103)
|+||||+|+..|+.+++++|++.+ .+++.+|..|.||+|+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~-----~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG-----ADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT-----SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999999999999988 888899999999999999999999999885
No 30
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.78 E-value=1.7e-18 Score=109.20 Aligned_cols=92 Identities=15% Similarity=0.213 Sum_probs=75.8
Q ss_pred hHHHHHHH--HhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhC--ChhHHHHHHHHhCcccccccccccCCCCcH
Q 038143 3 VNCLSKFA--MTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAG--QTNIVSELVEIMGENASNVLKIQNDRGDTA 78 (103)
Q Consensus 3 ~~~l~~a~--~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~g~tp 78 (103)
.+|||.|+ ..|+.+.++.+++. +.+.+..+..|.||||+|+..+ +.+++++|++.| ++++.++..|.||
T Consensus 107 ~tpL~~A~~~~~~~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-----~din~~d~~g~tp 179 (480)
T PHA03100 107 ITPLLYAISKKSNSYSIVEYLLDN--GANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG-----VDINAKNRYGYTP 179 (480)
T ss_pred CchhhHHHhcccChHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCC-----CCcccccCCCCCH
Confidence 57888888 88888888888887 5667777888888888888888 788888888887 7778888888888
Q ss_pred HHHHHHhCCHHHHHHHHhcCccc
Q 038143 79 FHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~l 101 (103)
||+|+..|+.+++++|++.|+++
T Consensus 180 L~~A~~~~~~~iv~~Ll~~ga~~ 202 (480)
T PHA03100 180 LHIAVEKGNIDVIKFLLDNGADI 202 (480)
T ss_pred HHHHHHhCCHHHHHHHHHcCCCc
Confidence 88888888888888888887654
No 31
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.78 E-value=3.2e-18 Score=113.70 Aligned_cols=89 Identities=21% Similarity=0.196 Sum_probs=81.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
..+|+.|+..|+.+.++.++.. +.+++..|..|.||||+|+..|+.++++.|++.| ++++.+|..|.||||+|
T Consensus 526 ~~~L~~Aa~~g~~~~l~~Ll~~--G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-----adin~~d~~G~TpL~~A 598 (823)
T PLN03192 526 ASNLLTVASTGNAALLEELLKA--KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA-----CNVHIRDANGNTALWNA 598 (823)
T ss_pred hhHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcC-----CCCCCcCCCCCCHHHHH
Confidence 3689999999999999999998 7778899999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcC
Q 038143 83 AALGNEAMCHCMASKD 98 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~ 98 (103)
+..|+.+++++|++.+
T Consensus 599 ~~~g~~~iv~~L~~~~ 614 (823)
T PLN03192 599 ISAKHHKIFRILYHFA 614 (823)
T ss_pred HHhCCHHHHHHHHhcC
Confidence 9988888888887654
No 32
>PHA03095 ankyrin-like protein; Provisional
Probab=99.77 E-value=3.3e-18 Score=107.63 Aligned_cols=93 Identities=15% Similarity=0.115 Sum_probs=77.9
Q ss_pred chHHHHHHHHhC---CHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhC-ChhHHHHHHHHhCcccccccccccCCCCc
Q 038143 2 EVNCLSKFAMTG---QWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAG-QTNIVSELVEIMGENASNVLKIQNDRGDT 77 (103)
Q Consensus 2 ~~~~l~~a~~~g---~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~~~~~g~t 77 (103)
..+|||.|+..| +.+.++.+++. +.+++..+..|.||||+|+..+ ..+++++|++.| ++++.++..|.|
T Consensus 47 g~t~Lh~a~~~~~~~~~~iv~~Ll~~--Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~g-----a~in~~~~~g~t 119 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKDIVRLLLEA--GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAG-----ADVNAKDKVGRT 119 (471)
T ss_pred CCCHHHHHHHhcCCChHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcC-----CCCCCCCCCCCC
Confidence 357899999888 88888888888 6678888888999999999988 588999999888 888888888999
Q ss_pred HHHHHH--HhCCHHHHHHHHhcCccc
Q 038143 78 AFHLAA--ALGNEAMCHCMASKDREL 101 (103)
Q Consensus 78 pl~~a~--~~~~~~~~~~l~~~~~~l 101 (103)
|||+|+ ..++.+++++|++.|+++
T Consensus 120 pLh~a~~~~~~~~~iv~~Ll~~gad~ 145 (471)
T PHA03095 120 PLHVYLSGFNINPKVIRLLLRKGADV 145 (471)
T ss_pred HHHHHhhCCcCCHHHHHHHHHcCCCC
Confidence 999988 456788889888887754
No 33
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.3e-18 Score=108.31 Aligned_cols=89 Identities=27% Similarity=0.350 Sum_probs=82.4
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHh
Q 038143 6 LSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAAL 85 (103)
Q Consensus 6 l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 85 (103)
|..|+..|.++.|...+.+ --+....+..|.|+||.|+..||.++|+||++.| ++++..|.+||||||.|+.-
T Consensus 554 LLDaaLeGEldlVq~~i~e--v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~g-----anVNa~DSdGWTPLHCAASC 626 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYE--VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFG-----ANVNAADSDGWTPLHCAASC 626 (752)
T ss_pred HHhhhhcchHHHHHHHHHh--hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcC-----CcccCccCCCCchhhhhhhc
Confidence 5678999999999999988 3457778999999999999999999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHhcCccc
Q 038143 86 GNEAMCHCMASKDREL 101 (103)
Q Consensus 86 ~~~~~~~~l~~~~~~l 101 (103)
++..+++.|++.|+.+
T Consensus 627 Nnv~~ckqLVe~Gaav 642 (752)
T KOG0515|consen 627 NNVPMCKQLVESGAAV 642 (752)
T ss_pred CchHHHHHHHhccceE
Confidence 9999999999998765
No 34
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.77 E-value=7.8e-18 Score=96.48 Aligned_cols=92 Identities=9% Similarity=0.080 Sum_probs=80.3
Q ss_pred hHHHHHHHHh---CCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHH--hCChhHHHHHHHHhCcccccccccccCCCCc
Q 038143 3 VNCLSKFAMT---GQWDNIVQAYENNPMSREAKLTRSGDTALHIAAA--AGQTNIVSELVEIMGENASNVLKIQNDRGDT 77 (103)
Q Consensus 3 ~~~l~~a~~~---g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~t 77 (103)
.+|||.|+.. ++.+.++.+++. +++++..|..|.||||+|+. .++.+++++|++.| ++++.+|..|.|
T Consensus 88 ~TpLh~a~~~~~~~~~eiv~~Ll~~--gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g-----adin~~d~~g~t 160 (209)
T PHA02859 88 LSALHHYLSFNKNVEPEILKILIDS--GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG-----VSFLNKDFDNNN 160 (209)
T ss_pred CCHHHHHHHhCccccHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC-----CCcccccCCCCc
Confidence 5899998864 478999999988 77888999999999999876 46789999999998 889999999999
Q ss_pred HHHH-HHHhCCHHHHHHHHhcCccc
Q 038143 78 AFHL-AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 78 pl~~-a~~~~~~~~~~~l~~~~~~l 101 (103)
|+|. ++..++.+++++|++.|+++
T Consensus 161 ~Lh~~a~~~~~~~iv~~Ll~~Gadi 185 (209)
T PHA02859 161 ILYSYILFHSDKKIFDFLTSLGIDI 185 (209)
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 9995 56688999999999998764
No 35
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.77 E-value=6.5e-18 Score=105.61 Aligned_cols=94 Identities=19% Similarity=0.094 Sum_probs=82.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCC---------------------CchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNP---------------------MSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMG 61 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~---------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 61 (103)
.+||+.|+..|+.+.++.|+..+. +.+++..+..|.||||+|+..|+.+++++|++.|
T Consensus 69 ~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~g- 147 (434)
T PHA02874 69 PHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYG- 147 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCC-
Confidence 479999999999999998887632 2234557789999999999999999999999998
Q ss_pred cccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 62 ENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 62 ~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
++++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 148 ----ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~ 183 (434)
T PHA02874 148 ----ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA 183 (434)
T ss_pred ----CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC
Confidence 888999999999999999999999999999998754
No 36
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.77 E-value=9.4e-19 Score=98.85 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=87.5
Q ss_pred CchHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 1 MEVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 1 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
+.++||.+|+.+|+.+.|++||.. +++++...+...++|.+|++.|..+++++|++++ .+++.-|.+|-|||.
T Consensus 159 ~GfTpLiWAaa~G~i~vV~fLL~~--GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~-----vdVNvyDwNGgTpLl 231 (296)
T KOG0502|consen 159 FGFTPLIWAAAKGHIPVVQFLLNS--GADPDALGKYRESALSLATRGGYTDIVELLLTRE-----VDVNVYDWNGGTPLL 231 (296)
T ss_pred cCchHhHHHHhcCchHHHHHHHHc--CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcC-----CCcceeccCCCceee
Confidence 357899999999999999999999 7778888888899999999999999999999998 889999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCcccc
Q 038143 81 LAAALGNEAMCHCMASKDRELI 102 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~l~ 102 (103)
+|++-+|..|++.|+..|+++.
T Consensus 232 yAvrgnhvkcve~Ll~sGAd~t 253 (296)
T KOG0502|consen 232 YAVRGNHVKCVESLLNSGADVT 253 (296)
T ss_pred eeecCChHHHHHHHHhcCCCcc
Confidence 9999999999999999998764
No 37
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=2.3e-18 Score=115.13 Aligned_cols=91 Identities=21% Similarity=0.187 Sum_probs=82.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+.+|+.+.|+.|+++ +++.+.++..|+||||.||..|+.+++.+|+++| +.++..+.+|.|||+.|
T Consensus 541 ~TpLh~A~~~g~v~~VkfLLe~--gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~G-----A~vna~d~~g~TpL~iA 613 (1143)
T KOG4177|consen 541 YTPLHVAVHYGNVDLVKFLLEH--GADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHG-----ASVNAADLDGFTPLHIA 613 (1143)
T ss_pred cchHHHHHhcCCchHHHHhhhC--CccccccCCCCCChhhHHHHcChHHHHHHHHHcC-----CCCCcccccCcchhHHH
Confidence 4799999999999999999999 7788888999999999999999999999999998 89999999999999999
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
++.|+.++++.|+..+..
T Consensus 614 ~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 614 VRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HHhcccchhhHHHhccCc
Confidence 999999999988876554
No 38
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.76 E-value=1.3e-17 Score=108.66 Aligned_cols=87 Identities=22% Similarity=0.243 Sum_probs=82.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
.+|+.|+..|+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~--Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-----advn~~d~~G~TpLh~A~ 156 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTG--GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFG-----ADPTLLDKDGKTPLELAE 156 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHHH
Confidence 358899999999999999998 6778888999999999999999999999999998 899999999999999999
Q ss_pred HhCCHHHHHHHHhc
Q 038143 84 ALGNEAMCHCMASK 97 (103)
Q Consensus 84 ~~~~~~~~~~l~~~ 97 (103)
..|+.+++++|+..
T Consensus 157 ~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 157 ENGFREVVQLLSRH 170 (664)
T ss_pred HCCcHHHHHHHHhC
Confidence 99999999999987
No 39
>PHA02946 ankyin-like protein; Provisional
Probab=99.75 E-value=1.4e-17 Score=104.46 Aligned_cols=91 Identities=11% Similarity=0.057 Sum_probs=66.2
Q ss_pred HHHHHHHH--hCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 4 NCLSKFAM--TGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 4 ~~l~~a~~--~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
++||.++. .++.+.++.++.. +.+++..|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+
T Consensus 39 ~~Lh~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G-----Adin~~d~~g~TpLh~ 111 (446)
T PHA02946 39 HILHAYCGIKGLDERFVEELLHR--GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHG-----ADPNACDKQHKTPLYY 111 (446)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHC--cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCc-----CCCCCCCCCCCCHHHH
Confidence 45665553 3355677777777 5667777888888888888888888888888877 7777788888888888
Q ss_pred HHHhC--CHHHHHHHHhcCccc
Q 038143 82 AAALG--NEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~--~~~~~~~l~~~~~~l 101 (103)
|+..+ ..+++++|++.|+++
T Consensus 112 A~~~~~~~~e~v~lLl~~Gadi 133 (446)
T PHA02946 112 LSGTDDEVIERINLLVQYGAKI 133 (446)
T ss_pred HHHcCCchHHHHHHHHHcCCCc
Confidence 77654 367778888777654
No 40
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.75 E-value=5.4e-18 Score=92.70 Aligned_cols=87 Identities=21% Similarity=0.153 Sum_probs=79.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
-+|||.|+..|+.++|..++.. +++.+.+...||||||-||..++.+++..|+++| ++++.......||||+|
T Consensus 98 YTpLHRAaYn~h~div~~ll~~--gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhg-----aDVnA~t~g~ltpLhla 170 (228)
T KOG0512|consen 98 YTPLHRAAYNGHLDIVHELLLS--GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHG-----ADVNAQTKGLLTPLHLA 170 (228)
T ss_pred ccHHHHHHhcCchHHHHHHHHc--cCCcccccccCccchhhhhcccchhHHHHHHhcc-----CcccccccccchhhHHh
Confidence 4799999999999999999999 7889999999999999999999999999999999 99999999999999999
Q ss_pred HHhCC-HHHHHHHHh
Q 038143 83 AALGN-EAMCHCMAS 96 (103)
Q Consensus 83 ~~~~~-~~~~~~l~~ 96 (103)
+...+ ...+++|+.
T Consensus 171 a~~rn~r~t~~~Ll~ 185 (228)
T KOG0512|consen 171 AGNRNSRDTLELLLH 185 (228)
T ss_pred hcccchHHHHHHHhh
Confidence 98665 455666654
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.74 E-value=1.5e-17 Score=105.39 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=79.9
Q ss_pred hHHHHHHHHh-----CCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhC---ChhHHHHHHHHhCcccccccccccCC
Q 038143 3 VNCLSKFAMT-----GQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAG---QTNIVSELVEIMGENASNVLKIQNDR 74 (103)
Q Consensus 3 ~~~l~~a~~~-----g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~ 74 (103)
.+|||.++.. +..+.++.|++. +++++..|..|.||||+|+..+ +.+++++|++.| ++++.+|..
T Consensus 72 ~TpL~~~~~n~~~~~~~~~iv~~Ll~~--GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G-----advn~~d~~ 144 (489)
T PHA02798 72 STPLCTILSNIKDYKHMLDIVKILIEN--GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENG-----ADTTLLDKD 144 (489)
T ss_pred CChHHHHHHhHHhHHhHHHHHHHHHHC--CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcC-----CCccccCCC
Confidence 5789888753 668888999988 7788889999999999999875 678999999998 889999999
Q ss_pred CCcHHHHHHHhCC---HHHHHHHHhcCccc
Q 038143 75 GDTAFHLAAALGN---EAMCHCMASKDREL 101 (103)
Q Consensus 75 g~tpl~~a~~~~~---~~~~~~l~~~~~~l 101 (103)
|.||||+|+..++ .+++++|++.|+++
T Consensus 145 g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi 174 (489)
T PHA02798 145 GFTMLQVYLQSNHHIDIEIIKLLLEKGVDI 174 (489)
T ss_pred CCcHHHHHHHcCCcchHHHHHHHHHhCCCc
Confidence 9999999999887 89999999988764
No 42
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.74 E-value=1.1e-17 Score=108.13 Aligned_cols=96 Identities=21% Similarity=0.248 Sum_probs=86.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
+.+|||+|++.|..+++..++.. +...+.++.++.||||.|+++|+..+++.|++.. .-...+..|-.|.||+|+
T Consensus 273 g~tpLH~a~r~G~~~svd~Ll~~--Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~---~~rllne~D~~g~tpLHl 347 (929)
T KOG0510|consen 273 GCTPLHYAARQGGPESVDNLLGF--GASINSKNKDEESPLHFAAIYGRINTVERLLQES---DTRLLNESDLHGMTPLHL 347 (929)
T ss_pred CCchHHHHHHcCChhHHHHHHHc--CCcccccCCCCCCchHHHHHcccHHHHHHHHhCc---CccccccccccCCCchhh
Confidence 46899999999999999999999 7788889999999999999999999999999922 225667788899999999
Q ss_pred HHHhCCHHHHHHHHhcCcccc
Q 038143 82 AAALGNEAMCHCMASKDRELI 102 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l~ 102 (103)
|++.||..+++.|+.+|+...
T Consensus 348 aa~~gH~~v~qlLl~~GA~~~ 368 (929)
T KOG0510|consen 348 AAKSGHDRVVQLLLNKGALFL 368 (929)
T ss_pred hhhcCHHHHHHHHHhcChhhh
Confidence 999999999999999998653
No 43
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.74 E-value=4.3e-18 Score=104.82 Aligned_cols=93 Identities=20% Similarity=0.216 Sum_probs=86.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
..||+.|+.-|+++.|+.++.+ ++++|..+..+.|||-.||..|+.+++++|++++ ++++..|+.|.|.||+|
T Consensus 85 appLWaAsaAGHl~vVk~L~~~--ga~VN~tT~TNStPLraACfDG~leivKyLvE~g-----ad~~IanrhGhTcLmIa 157 (615)
T KOG0508|consen 85 APPLWAASAAGHLEVVKLLLRR--GASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHG-----ADPEIANRHGHTCLMIA 157 (615)
T ss_pred CchhhHHhccCcHHHHHHHHHh--cCccccccccCCccHHHHHhcchhHHHHHHHHcC-----CCCcccccCCCeeEEee
Confidence 3578888899999999999999 6778888888899999999999999999999998 99999999999999999
Q ss_pred HHhCCHHHHHHHHhcCcccc
Q 038143 83 AALGNEAMCHCMASKDRELI 102 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l~ 102 (103)
+.+||.+|+++|++.|+++.
T Consensus 158 ~ykGh~~I~qyLle~gADvn 177 (615)
T KOG0508|consen 158 CYKGHVDIAQYLLEQGADVN 177 (615)
T ss_pred eccCchHHHHHHHHhCCCcc
Confidence 99999999999999998864
No 44
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.74 E-value=3.5e-17 Score=97.67 Aligned_cols=86 Identities=16% Similarity=0.057 Sum_probs=75.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhc-CCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKL-TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
..+|||.|+..|+.+.++.|+.. +++++.. +..|.||||+|+..++.+++++|+..| ++++.+|..|.||+|
T Consensus 70 g~TpLh~Aa~~~~~eivklLL~~--GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~G-----Adin~kd~~G~TpL~ 142 (300)
T PHA02884 70 KTNPLIYAIDCDNDDAAKLLIRY--GADVNRYAEEAKITPLYISVLHGCLKCLEILLSYG-----ADINIQTNDMVTPIE 142 (300)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHH
Confidence 46899999999999999999998 6778775 467999999999999999999999999 999999999999999
Q ss_pred HHHHhCCHHHHHHH
Q 038143 81 LAAALGNEAMCHCM 94 (103)
Q Consensus 81 ~a~~~~~~~~~~~l 94 (103)
+|+..++.+++..+
T Consensus 143 ~A~~~~~~~~~~~~ 156 (300)
T PHA02884 143 LALMICNNFLAFMI 156 (300)
T ss_pred HHHHhCChhHHHHh
Confidence 99987765554443
No 45
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.74 E-value=1.4e-17 Score=91.34 Aligned_cols=94 Identities=15% Similarity=0.188 Sum_probs=72.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHc---CCCchhhhcCCCCCcHHHHHHHhCChh---HHHHHHHHhCccccccccccc-CC
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYEN---NPMSREAKLTRSGDTALHIAAAAGQTN---IVSELVEIMGENASNVLKIQN-DR 74 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~---~~~~~~~~~~~~g~t~l~~a~~~~~~~---~~~~ll~~~~~~~~~~~~~~~-~~ 74 (103)
..+|||+|+..|+...+...... .........|..|.||||+|+..++.+ ++++|++.+ ++++.++ ..
T Consensus 17 g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-----adin~~~~~~ 91 (154)
T PHA02736 17 GENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-----ADINGKERVF 91 (154)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-----CCccccCCCC
Confidence 46899999999985433222111 111234457899999999999999864 688899988 8889998 48
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhc-Ccc
Q 038143 75 GDTAFHLAAALGNEAMCHCMASK-DRE 100 (103)
Q Consensus 75 g~tpl~~a~~~~~~~~~~~l~~~-~~~ 100 (103)
|.||||+|+..++.+++++|+.. +++
T Consensus 92 g~T~Lh~A~~~~~~~i~~~Ll~~~g~d 118 (154)
T PHA02736 92 GNTPLHIAVYTQNYELATWLCNQPGVN 118 (154)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 99999999999999999999974 554
No 46
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.73 E-value=3.7e-17 Score=106.94 Aligned_cols=92 Identities=15% Similarity=0.091 Sum_probs=61.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC-hhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ-TNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.|++. +.+.+..+..|.||||+|+..+. ..++++|++.| ++++.+|..|.||||+
T Consensus 376 ~TpLh~Aa~~~~~~iv~~Ll~~--gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g-----adin~~d~~G~TpLh~ 448 (682)
T PHA02876 376 KTPIHYAAVRNNVVIINTLLDY--GADIEALSQKIGTALHFALCGTNPYMSVKTLIDRG-----ANVNSKNKDLSTPLHY 448 (682)
T ss_pred CCHHHHHHHcCCHHHHHHHHHC--CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCC-----CCCCcCCCCCChHHHH
Confidence 3555555555555555555555 34444555555555555554443 23455555555 7788899999999999
Q ss_pred HHHhC-CHHHHHHHHhcCccc
Q 038143 82 AAALG-NEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~-~~~~~~~l~~~~~~l 101 (103)
|+..+ +.+++++|++.|+++
T Consensus 449 Aa~~~~~~~iv~lLl~~Gad~ 469 (682)
T PHA02876 449 ACKKNCKLDVIEMLLDNGADV 469 (682)
T ss_pred HHHhCCcHHHHHHHHHCCCCC
Confidence 99877 689999999998764
No 47
>PHA02946 ankyin-like protein; Provisional
Probab=99.73 E-value=4.1e-17 Score=102.33 Aligned_cols=90 Identities=10% Similarity=-0.003 Sum_probs=68.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC--hhHHHHHHHHhCccccccccc-ccCCCCcH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ--TNIVSELVEIMGENASNVLKI-QNDRGDTA 78 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~-~~~~g~tp 78 (103)
..+|||+|+..|+.+.++.|++. +++++.+|..|.||||+|+..++ .+++++|++.| ++++. .+..|.||
T Consensus 72 G~TpLh~Aa~~g~~eiv~lLL~~--GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~G-----adin~~~d~~g~tp 144 (446)
T PHA02946 72 GNYPLHIASKINNNRIVAMLLTH--GADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYG-----AKINNSVDEEGCGP 144 (446)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-----CCcccccCCCCCcH
Confidence 36899999999999999999998 67788899999999999987664 68899999988 55553 45566666
Q ss_pred HHHHHHhCCHHHHHHHHhcCc
Q 038143 79 FHLAAALGNEAMCHCMASKDR 99 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~ 99 (103)
|| |+..++.+++++|++.|+
T Consensus 145 L~-aa~~~~~~vv~~Ll~~ga 164 (446)
T PHA02946 145 LL-ACTDPSERVFKKIMSIGF 164 (446)
T ss_pred HH-HHHCCChHHHHHHHhccc
Confidence 64 344455566666655544
No 48
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.72 E-value=6.9e-17 Score=102.47 Aligned_cols=66 Identities=20% Similarity=0.183 Sum_probs=60.9
Q ss_pred hhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 30 EAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 30 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
++..|..|+||||+|+..++.+++++|++.| ++++.+|..|.||||+|+..|+.++++.|++.+|.
T Consensus 249 vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G-----adin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~ 314 (494)
T PHA02989 249 INKKDKKGFNPLLISAKVDNYEAFNYLLKLG-----DDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314 (494)
T ss_pred CCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC-----CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 3456778999999999999999999999999 99999999999999999999999999999998764
No 49
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.72 E-value=2.1e-17 Score=110.69 Aligned_cols=92 Identities=21% Similarity=0.187 Sum_probs=83.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+++|.+...+....+..++.. +.+++.++..|.||||.|+.+|+.++|++|++++ ++++.+++.|+||||.|
T Consensus 508 l~~lhla~~~~~v~~~~~l~~~--ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~g-----Adv~ak~~~G~TPLH~A 580 (1143)
T KOG4177|consen 508 LTPLHLAADEDTVKVAKILLEH--GANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHG-----ADVNAKDKLGYTPLHQA 580 (1143)
T ss_pred cchhhhhhhhhhHHHHHHHhhc--CCceehhcccccchHHHHHhcCCchHHHHhhhCC-----ccccccCCCCCChhhHH
Confidence 4577888888888888888877 7778888899999999999999999999999999 99999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+|+++|+++|+++
T Consensus 581 a~~G~~~i~~LLlk~GA~v 599 (1143)
T KOG4177|consen 581 AQQGHNDIAELLLKHGASV 599 (1143)
T ss_pred HHcChHHHHHHHHHcCCCC
Confidence 9999999999999998764
No 50
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.72 E-value=8.1e-18 Score=77.72 Aligned_cols=55 Identities=25% Similarity=0.341 Sum_probs=33.1
Q ss_pred HHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 22 YENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 22 l~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
|+.+ ..+++..|..|.||||+|+..|+.+++++|++.+ .+++.+|..|+||+|+|
T Consensus 2 L~~~-~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g-----~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHG-PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG-----ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT-------TT---TTS--HHHH-
T ss_pred CccC-cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc-----CCCCCCcCCCCCHHHhC
Confidence 4453 3678889999999999999999999999999887 99999999999999987
No 51
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.71 E-value=8.6e-17 Score=105.27 Aligned_cols=92 Identities=13% Similarity=0.098 Sum_probs=59.1
Q ss_pred hHHHHHHHHhCC--HHHHHHHHHcCCCchhhhcCCCCCcHHHHHH-----------------------------------
Q 038143 3 VNCLSKFAMTGQ--WDNIVQAYENNPMSREAKLTRSGDTALHIAA----------------------------------- 45 (103)
Q Consensus 3 ~~~l~~a~~~g~--~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~----------------------------------- 45 (103)
.+|||.|+..|+ .+.|+.|++. +++++.++..|+||||+|+
T Consensus 213 ~TPLH~Aa~~g~~~~eIVklLLe~--GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~ 290 (764)
T PHA02716 213 ITPLHTYLITGNVCASVIKKIIEL--GGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYIT 290 (764)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHH
Confidence 467777777764 3666666666 5566666777777776542
Q ss_pred --HhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHH--hCCHHHHHHHHhcCccc
Q 038143 46 --AAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAA--LGNEAMCHCMASKDREL 101 (103)
Q Consensus 46 --~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~--~~~~~~~~~l~~~~~~l 101 (103)
..|+.+++++|++.| ++++.+|..|+||||+|+. .++.+++++|++.|+++
T Consensus 291 AA~~g~leiVklLLe~G-----AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADI 345 (764)
T PHA02716 291 LARNIDISVVYSFLQPG-----VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDL 345 (764)
T ss_pred HHHcCCHHHHHHHHhCC-----CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCC
Confidence 234555666666665 6666777777777777653 34667777777776653
No 52
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.70 E-value=2.6e-16 Score=103.06 Aligned_cols=74 Identities=12% Similarity=0.075 Sum_probs=64.2
Q ss_pred hHHHHHHHH--hCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC--hhHHHHHHHHhCcccccccccccCCCCcH
Q 038143 3 VNCLSKFAM--TGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ--TNIVSELVEIMGENASNVLKIQNDRGDTA 78 (103)
Q Consensus 3 ~~~l~~a~~--~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~g~tp 78 (103)
.+|||.|+. .++.+.++.|++. +++++..|..|.||||+|+..|+ .+++++|++.| ++++.++..|.||
T Consensus 178 ~TpLH~A~~n~~~~~eIVklLLe~--GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~G-----ADVN~kD~~G~TP 250 (764)
T PHA02716 178 YGILHAYLGNMYVDIDILEWLCNN--GVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELG-----GDMDMKCVNGMSP 250 (764)
T ss_pred CcHHHHHHHhccCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcC-----CCCCCCCCCCCCH
Confidence 579998764 4678999999988 77888899999999999999986 48999999998 8999999999999
Q ss_pred HHHHH
Q 038143 79 FHLAA 83 (103)
Q Consensus 79 l~~a~ 83 (103)
||+|+
T Consensus 251 Lh~Ai 255 (764)
T PHA02716 251 IMTYI 255 (764)
T ss_pred HHHHH
Confidence 99753
No 53
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.70 E-value=2.1e-17 Score=99.07 Aligned_cols=57 Identities=30% Similarity=0.448 Sum_probs=33.1
Q ss_pred CCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhc
Q 038143 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASK 97 (103)
Q Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 97 (103)
.|.|+|++|+..|..++++.|+..+ +++|.+|.+|.|+|+.|+.+||.|++++|+..
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacg-----AdVNiQDdDGSTALMCA~EHGhkEivklLLA~ 395 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACG-----ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV 395 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHcc-----CCCccccCCccHHHhhhhhhChHHHHHHHhcc
Confidence 3455555555555555555555555 55566666666666666666666666655543
No 54
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.69 E-value=3.8e-16 Score=102.24 Aligned_cols=91 Identities=12% Similarity=0.020 Sum_probs=83.6
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
++++.++..|+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++..+..|.||+|+|+
T Consensus 147 ~~l~~~i~~~~~~i~k~Ll~~--Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~G-----ad~n~~~~~g~t~L~~A~ 219 (682)
T PHA02876 147 KLIKERIQQDELLIAEMLLEG--GADVNAKDIYCITPIHYAAERGNAKMVNLLLSYG-----ADVNIIALDDLSVLECAV 219 (682)
T ss_pred HHHHHHHHCCcHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCcCccCCCCCCHHHHHH
Confidence 567888899999999999998 7778889999999999999999999999999998 888999999999999999
Q ss_pred HhCCHHHHHHHHhcCccc
Q 038143 84 ALGNEAMCHCMASKDREL 101 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~~l 101 (103)
..++.++++.|++.++++
T Consensus 220 ~~~~~~ivk~Ll~~~~~~ 237 (682)
T PHA02876 220 DSKNIDTIKAIIDNRSNI 237 (682)
T ss_pred HcCCHHHHHHHHhcCCCC
Confidence 999999999998876543
No 55
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.68 E-value=1.7e-15 Score=79.63 Aligned_cols=90 Identities=27% Similarity=0.306 Sum_probs=81.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.+..++.. +...+..+..|.+|+|.|+..+..++++.++..+ ..++..+..|.||+|+|
T Consensus 8 ~t~l~~a~~~~~~~~i~~li~~--~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~-----~~~~~~~~~~~~~l~~a 80 (126)
T cd00204 8 RTPLHLAASNGHLEVVKLLLEN--GADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG-----ADVNARDKDGNTPLHLA 80 (126)
T ss_pred CCHHHHHHHcCcHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHH
Confidence 5899999999999999999988 4444677889999999999999999999999987 67788889999999999
Q ss_pred HHhCCHHHHHHHHhcCc
Q 038143 83 AALGNEAMCHCMASKDR 99 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~ 99 (103)
+..++.+++++|++.+.
T Consensus 81 ~~~~~~~~~~~L~~~~~ 97 (126)
T cd00204 81 ARNGNLDVVKLLLKHGA 97 (126)
T ss_pred HHcCcHHHHHHHHHcCC
Confidence 99999999999998753
No 56
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.67 E-value=6.4e-16 Score=98.12 Aligned_cols=92 Identities=11% Similarity=0.000 Sum_probs=62.3
Q ss_pred hHHHHHHHHhC------CHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHh---CChhHHHHHHHHhCccccccc-cccc
Q 038143 3 VNCLSKFAMTG------QWDNIVQAYENNPMSREAKLTRSGDTALHIAAAA---GQTNIVSELVEIMGENASNVL-KIQN 72 (103)
Q Consensus 3 ~~~l~~a~~~g------~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~-~~~~ 72 (103)
.+|||.|+..+ ..+.++.|++. |++++..+..|.||||.|+.. ++.+++++|++.| +++ +.+|
T Consensus 70 ~tpL~~a~~~~~~~~~~~~~iv~~Ll~~--Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G-----adin~~~d 142 (494)
T PHA02989 70 ETPLCAVLRNREITSNKIKKIVKLLLKF--GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG-----INVNDVKN 142 (494)
T ss_pred CCcHHHHHhccCcchhhHHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC-----CCcccccC
Confidence 46777666543 34566666766 566677777777777766544 4567777777777 677 6777
Q ss_pred CCCCcHHHHHHHh--CCHHHHHHHHhcCccc
Q 038143 73 DRGDTAFHLAAAL--GNEAMCHCMASKDREL 101 (103)
Q Consensus 73 ~~g~tpl~~a~~~--~~~~~~~~l~~~~~~l 101 (103)
..|.||||+|+.. ++.+++++|++.|+++
T Consensus 143 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi 173 (494)
T PHA02989 143 SRGYNLLHMYLESFSVKKDVIKILLSFGVNL 173 (494)
T ss_pred CCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 7777777776543 4677777777777654
No 57
>PHA02798 ankyrin-like protein; Provisional
Probab=99.67 E-value=6.7e-16 Score=97.91 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=62.8
Q ss_pred hhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 29 REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 29 ~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
+++.+|..|.||||+|+..++.+++++|++.| ++++.+|..|.|||++|+..++.++++.|++.+|+.
T Consensus 250 dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~G-----Adin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 250 DINQVDELGFNPLYYSVSHNNRKIFEYLLQLG-----GDINIITELGNTCLFTAFENESKFIFNSILNKKPNK 317 (489)
T ss_pred CCCCcCcCCccHHHHHHHcCcHHHHHHHHHcC-----CcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence 34557788999999999999999999999999 999999999999999999999999999999998764
No 58
>PHA02917 ankyrin-like protein; Provisional
Probab=99.67 E-value=6.9e-16 Score=100.51 Aligned_cols=93 Identities=9% Similarity=0.046 Sum_probs=74.4
Q ss_pred chHHHHHHHHh---CCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCCh----------------------------
Q 038143 2 EVNCLSKFAMT---GQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQT---------------------------- 50 (103)
Q Consensus 2 ~~~~l~~a~~~---g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~---------------------------- 50 (103)
..+|||.|+.. |+.+.|+.|++. +++++..+..|+||||+|+..|+.
T Consensus 32 g~t~Lh~a~~~~~~~~~~~v~~Ll~~--ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~ 109 (661)
T PHA02917 32 KNNALHAYLFNEHCNNVEVVKLLLDS--GTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYM 109 (661)
T ss_pred CCcHHHHHHHhhhcCcHHHHHHHHHC--CCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHH
Confidence 36899997555 889999999988 777888899999999998887763
Q ss_pred -------hHHHHHHHHhCcccccccccccCCCCcHHHHH--HHhCCHHHHHHHHhcCccc
Q 038143 51 -------NIVSELVEIMGENASNVLKIQNDRGDTAFHLA--AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 51 -------~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a--~~~~~~~~~~~l~~~~~~l 101 (103)
+++++|++.| ++++.+|..|.||||.+ +..|+.+++++|+++|+++
T Consensus 110 a~~~~~~e~vk~Ll~~G-----adin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v 164 (661)
T PHA02917 110 KSKNVDVDLIKVLVEHG-----FDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV 164 (661)
T ss_pred HhhcCCHHHHHHHHHcC-----CCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc
Confidence 3334444444 88889999999999954 3578999999999999865
No 59
>PHA02730 ankyrin-like protein; Provisional
Probab=99.66 E-value=1.2e-15 Score=98.67 Aligned_cols=94 Identities=11% Similarity=0.115 Sum_probs=73.0
Q ss_pred hHHHHHHHHhCC----HHHHHHHHHcCCCchhhhcCCCCCcHHHH---HHHhC---------ChhHHHHHHHHhCccccc
Q 038143 3 VNCLSKFAMTGQ----WDNIVQAYENNPMSREAKLTRSGDTALHI---AAAAG---------QTNIVSELVEIMGENASN 66 (103)
Q Consensus 3 ~~~l~~a~~~g~----~~~v~~ll~~~~~~~~~~~~~~g~t~l~~---a~~~~---------~~~~~~~ll~~~~~~~~~ 66 (103)
.+|||.|+..+. .+.++.|++++...+++..|..|.||||. +...+ ..+++++|+.+| +
T Consensus 379 ~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~G-----A 453 (672)
T PHA02730 379 NYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYM-----D 453 (672)
T ss_pred CcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcc-----c
Confidence 578998888875 78888888884333577778888998884 33222 124688888888 8
Q ss_pred ccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 67 VLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 67 ~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
+++.+|..|.||||+|+..++.+++++|++.|+++
T Consensus 454 DINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdI 488 (672)
T PHA02730 454 DIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASV 488 (672)
T ss_pred chhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCC
Confidence 88888999999999999988899999999888764
No 60
>PHA02795 ankyrin-like protein; Provisional
Probab=99.66 E-value=9.3e-16 Score=95.20 Aligned_cols=92 Identities=9% Similarity=-0.019 Sum_probs=60.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhc-----CCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKL-----TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTA 78 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~-----~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tp 78 (103)
+|+|.|+..|+.+.++.++.++.. ..+.. +..+.+++|.|+..++.+++++|+.+| ++++.+|..|.||
T Consensus 151 t~lh~A~~~~~~eIVk~Lls~Ga~-~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-----ADIN~kD~~G~Tp 224 (437)
T PHA02795 151 NAYFRGICKKESSVVEFILNCGIP-DENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-----EDINQLDAGGRTL 224 (437)
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCc-ccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-----CCcCcCCCCCCCH
Confidence 455555555555555555555211 11111 122445555555555555666666555 7889999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCccc
Q 038143 79 FHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~l 101 (103)
||+|+..|+.+++++|++.|+++
T Consensus 225 Lh~Aa~~g~~eiVelLL~~GAdI 247 (437)
T PHA02795 225 LYRAIYAGYIDLVSWLLENGANV 247 (437)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999999999865
No 61
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.66 E-value=2.7e-16 Score=97.66 Aligned_cols=89 Identities=21% Similarity=0.231 Sum_probs=56.5
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHh
Q 038143 6 LSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAAL 85 (103)
Q Consensus 6 l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 85 (103)
+..|+..|+.+.+..++.. +...+..+..|.|+||.++...+.+|++++++++ ++++.+|..|+||+|.|+..
T Consensus 44 ~l~A~~~~d~~ev~~ll~~--ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~g-----a~Vn~~d~e~wtPlhaaasc 116 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNR--GASPNLCNVDGLTALHQACIDDNLEMVKFLVENG-----ANVNAQDNEGWTPLHAAASC 116 (527)
T ss_pred HHhccccccHHHHHHHhcc--CCCccccCCccchhHHHHHhcccHHHHHHHHHhc-----CCccccccccCCcchhhccc
Confidence 3445566666666666666 3445556666666666666666666666666666 66666666666666666666
Q ss_pred CCHHHHHHHHhcCccc
Q 038143 86 GNEAMCHCMASKDREL 101 (103)
Q Consensus 86 ~~~~~~~~l~~~~~~l 101 (103)
|+..++++|++.|+++
T Consensus 117 g~~~i~~~li~~gA~~ 132 (527)
T KOG0505|consen 117 GYLNIVEYLIQHGANL 132 (527)
T ss_pred ccHHHHHHHHHhhhhh
Confidence 6666666666666543
No 62
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.66 E-value=6.3e-16 Score=92.81 Aligned_cols=89 Identities=21% Similarity=0.230 Sum_probs=81.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
-++|+.|+..|+.+.|+.||.. ++++|..|..|.|+|+.|+..||.++++.|+... .++....|.+|.|+|.+|
T Consensus 341 QTALMLAVSHGr~d~vk~LLac--gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p----~cd~sLtD~DgSTAl~IA 414 (452)
T KOG0514|consen 341 QTALMLAVSHGRVDMVKALLAC--GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVP----SCDISLTDVDGSTALSIA 414 (452)
T ss_pred chhhhhhhhcCcHHHHHHHHHc--cCCCccccCCccHHHhhhhhhChHHHHHHHhccC----cccceeecCCCchhhhhH
Confidence 4789999999999999999999 7889999999999999999999999999999873 478889999999999999
Q ss_pred HHhCCHHHHHHHHhc
Q 038143 83 AALGNEAMCHCMASK 97 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~ 97 (103)
-..||.||.-+|..+
T Consensus 415 leagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 415 LEAGHREIAVMLYAH 429 (452)
T ss_pred HhcCchHHHHHHHHH
Confidence 999999998877654
No 63
>PHA02917 ankyrin-like protein; Provisional
Probab=99.65 E-value=1.6e-15 Score=98.86 Aligned_cols=80 Identities=20% Similarity=0.245 Sum_probs=73.1
Q ss_pred HHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHH-hCCHHHHHH
Q 038143 15 WDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAA-LGNEAMCHC 93 (103)
Q Consensus 15 ~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~-~~~~~~~~~ 93 (103)
.+.++.++.. +++++.+|..|+||||+|+..++.+++++|++.| ++++.++..|.||||+|+. .++.+++++
T Consensus 432 ~~~v~~Ll~~--GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~G-----Adin~~d~~G~T~L~~A~~~~~~~~iv~~ 504 (661)
T PHA02917 432 LSTINICLPY--LKDINMIDKRGETLLHKAVRYNKQSLVSLLLESG-----SDVNIRSNNGYTCIAIAINESRNIELLKM 504 (661)
T ss_pred HHHHHHHHHC--CCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCc-----CCCCCCCCCCCCHHHHHHHhCCCHHHHHH
Confidence 5667888888 6788999999999999999999999999999999 9999999999999999996 678999999
Q ss_pred HHhcCccc
Q 038143 94 MASKDREL 101 (103)
Q Consensus 94 l~~~~~~l 101 (103)
|+++++++
T Consensus 505 LL~~ga~i 512 (661)
T PHA02917 505 LLCHKPTL 512 (661)
T ss_pred HHHcCCCh
Confidence 99998864
No 64
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.65 E-value=7.8e-16 Score=70.59 Aligned_cols=53 Identities=26% Similarity=0.250 Sum_probs=44.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELV 57 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 57 (103)
+++||.|+..|+.+.++.+++. +.+++..|..|+||||+|+..|+.+++++|+
T Consensus 2 ~t~lh~A~~~g~~~~~~~Ll~~--~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 2 RTPLHWAARSGNLEIVKLLLEH--GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SBHHHHHHHTT-HHHHHHHHHT--TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred ChHHHHHHHhCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 6899999999999999999999 6778888999999999999999999999986
No 65
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.64 E-value=9.5e-16 Score=86.85 Aligned_cols=91 Identities=19% Similarity=0.116 Sum_probs=80.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
-++|+..++...+++.+..+... .+|.+|..|.|||.||+.+|++.++++|++.| ++++....+..|+|.+
T Consensus 129 p~s~~slsVhql~L~~~~~~~~n----~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~G-----Adp~~lgk~resALsL 199 (296)
T KOG0502|consen 129 PWSPLSLSVHQLHLDVVDLLVNN----KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSG-----ADPDALGKYRESALSL 199 (296)
T ss_pred cCChhhHHHHHHHHHHHHHHhhc----cccCccccCchHhHHHHhcCchHHHHHHHHcC-----CChhhhhhhhhhhHhH
Confidence 45778888888887776655544 47789999999999999999999999999999 9999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|++.|..+++++|+++++++
T Consensus 200 At~ggytdiV~lLL~r~vdV 219 (296)
T KOG0502|consen 200 ATRGGYTDIVELLLTREVDV 219 (296)
T ss_pred HhcCChHHHHHHHHhcCCCc
Confidence 99999999999999998875
No 66
>PHA02730 ankyrin-like protein; Provisional
Probab=99.63 E-value=3.9e-15 Score=96.37 Aligned_cols=90 Identities=10% Similarity=0.032 Sum_probs=74.5
Q ss_pred chHHHHHHHHhC---CHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhC--ChhHHHHHHHHhCcccccccccccCCCC
Q 038143 2 EVNCLSKFAMTG---QWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAG--QTNIVSELVEIMGENASNVLKIQNDRGD 76 (103)
Q Consensus 2 ~~~~l~~a~~~g---~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~g~ 76 (103)
..+|||.|+..| +.+.|+.|+++ |++++.+|..|+||||+|+..+ +.+++++|++.| ..++++..+.-+.
T Consensus 41 G~TaLh~A~~~~~~~~~eivklLLs~--GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~---~~~~~~~~~~~~d 115 (672)
T PHA02730 41 GNNALHCYVSNKCDTDIKIVRLLLSR--GVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSY---SNASNELTSNIND 115 (672)
T ss_pred CCcHHHHHHHcCCcCcHHHHHHHHhC--CCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcC---CCCCcccccccCC
Confidence 358999999887 48999999988 7788889999999999988866 688999999986 2255577777788
Q ss_pred cHHHHHHH--hCCHHHHHHHHh
Q 038143 77 TAFHLAAA--LGNEAMCHCMAS 96 (103)
Q Consensus 77 tpl~~a~~--~~~~~~~~~l~~ 96 (103)
+|++.++. .++.+++++|++
T Consensus 116 ~~l~~y~~s~n~~~~~vk~Li~ 137 (672)
T PHA02730 116 FDLYSYMSSDNIDLRLLKYLIV 137 (672)
T ss_pred chHHHHHHhcCCcHHHHHHHHH
Confidence 89988877 778899999986
No 67
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.62 E-value=7.2e-15 Score=84.13 Aligned_cols=92 Identities=22% Similarity=0.257 Sum_probs=78.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC-----hhHHHHHHHHhCccccc---ccccccCC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ-----TNIVSELVEIMGENASN---VLKIQNDR 74 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~ll~~~~~~~~~---~~~~~~~~ 74 (103)
..+++.++..++.+.+..++.. +..++..+..|.|+||+|+..++ .++++.|++.+ + ..+.+|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g-----~~~~~~~~~~~~ 146 (235)
T COG0666 74 RLPLHSAASKGDDKIVKLLLAS--GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG-----ADLDVNNLRDED 146 (235)
T ss_pred cCHHHHHHHcCcHHHHHHHHHc--CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcC-----CCCCCccccCCC
Confidence 4678889999998888888888 66678889999999999999999 89999999988 5 56667899
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 75 GDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 75 g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
|.||+|+|+..|+.++++.|++.+++.
T Consensus 147 g~tpl~~A~~~~~~~~~~~ll~~~~~~ 173 (235)
T COG0666 147 GNTPLHWAALNGDADIVELLLEAGADP 173 (235)
T ss_pred CCchhHHHHHcCchHHHHHHHhcCCCC
Confidence 999999999999999999998887653
No 68
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.61 E-value=3.1e-15 Score=75.09 Aligned_cols=63 Identities=30% Similarity=0.316 Sum_probs=55.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccccc
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN 72 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 72 (103)
.+|||+|+..|+.+.++.+++. +.+++..+..|+||||+|+..++.+++++|+++| .+++.+|
T Consensus 27 ~~~l~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~n 89 (89)
T PF12796_consen 27 NTALHYAAENGNLEIVKLLLEN--GADINSQDKNGNTALHYAAENGNLEIVKLLLEHG-----ADVNIRN 89 (89)
T ss_dssp SBHHHHHHHTTTHHHHHHHHHT--TTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTT-----T-TTSS-
T ss_pred CCHHHHHHHcCCHHHHHHHHHh--cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcC
Confidence 5799999999999999999998 6678888999999999999999999999999998 7666654
No 69
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.61 E-value=1.2e-15 Score=98.31 Aligned_cols=92 Identities=23% Similarity=0.238 Sum_probs=69.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.++.||+|+.+|+...++.+++. +..+..+|..|.+|||+|++.|+.+++++++... ...+..+..|.||||.
T Consensus 49 gfTalhha~Lng~~~is~llle~--ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~-----d~~na~~~e~~tplhl 121 (854)
T KOG0507|consen 49 GFTLLHHAVLNGQNQISKLLLDY--EALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQT-----DILNAVNIENETPLHL 121 (854)
T ss_pred chhHHHHHHhcCchHHHHHHhcc--hhhhhhhhccCcceEEehhhcCcchHHHHHHhcc-----cCCCcccccCcCccch
Confidence 45778888888888777777776 4456666777788888888888888888877776 6677777778888888
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
++..||.+++.+|++.+++
T Consensus 122 aaqhgh~dvv~~Ll~~~ad 140 (854)
T KOG0507|consen 122 AAQHGHLEVVFYLLKKNAD 140 (854)
T ss_pred hhhhcchHHHHHHHhcCCC
Confidence 8888888888888877654
No 70
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.60 E-value=2.7e-15 Score=74.43 Aligned_cols=75 Identities=17% Similarity=0.032 Sum_probs=67.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.|+|||+|+-+|+.+.+++++.. +++++.+|+.|.|||--|+..||.+++++|++.| ++.+.+..+|.+.+..
T Consensus 34 gR~plhyAAD~GQl~ilefli~i--GA~i~~kDKygITPLLsAvwEGH~~cVklLL~~G-----Adrt~~~PdG~~~~ea 106 (117)
T KOG4214|consen 34 GRTPLHYAADYGQLSILEFLISI--GANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNG-----ADRTIHAPDGTALIEA 106 (117)
T ss_pred CcccchHhhhcchHHHHHHHHHh--ccccCCccccCCcHHHHHHHHhhHHHHHHHHHcC-----cccceeCCCchhHHhh
Confidence 37899999999999999999999 8889999999999999999999999999999999 8888888888877654
Q ss_pred HH
Q 038143 82 AA 83 (103)
Q Consensus 82 a~ 83 (103)
+-
T Consensus 107 te 108 (117)
T KOG4214|consen 107 TE 108 (117)
T ss_pred cc
Confidence 43
No 71
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.60 E-value=2.2e-15 Score=93.72 Aligned_cols=87 Identities=22% Similarity=0.222 Sum_probs=78.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++||.+|...+.++|.++++. +.+++..|..||||||.|+..|+..++++++..| +++...|..|..|+.++
T Consensus 74 lTalhq~~id~~~e~v~~l~e~--ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~g-----A~~~avNsdg~~P~dl~ 146 (527)
T KOG0505|consen 74 LTALHQACIDDNLEMVKFLVEN--GANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHG-----ANLLAVNSDGNMPYDLA 146 (527)
T ss_pred chhHHHHHhcccHHHHHHHHHh--cCCccccccccCCcchhhcccccHHHHHHHHHhh-----hhhhhccCCCCCccccc
Confidence 4789999999999999999999 7889999999999999999999999999999999 88999999999999998
Q ss_pred HHhCCHHHHHHHHh
Q 038143 83 AALGNEAMCHCMAS 96 (103)
Q Consensus 83 ~~~~~~~~~~~l~~ 96 (103)
......++.+..+.
T Consensus 147 e~ea~~~~l~~~~~ 160 (527)
T KOG0505|consen 147 EDEATLDVLETEMA 160 (527)
T ss_pred cCcchhHHHHHHHH
Confidence 88776666655443
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=99.59 E-value=1.7e-14 Score=92.74 Aligned_cols=92 Identities=5% Similarity=-0.015 Sum_probs=79.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCC--CcHHHHHHHhCCh---hHHHHHHHHhCcccccccccccCCCCc
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSG--DTALHIAAAAGQT---NIVSELVEIMGENASNVLKIQNDRGDT 77 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g--~t~l~~a~~~~~~---~~~~~ll~~~~~~~~~~~~~~~~~g~t 77 (103)
...++.|+..|+.+.++.|++. |++++..|..| .||||+|...... +++++++.+| ++++.+|..|.|
T Consensus 340 ~n~~~~Aa~~gn~eIVelLIs~--GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~G-----ADIN~kD~~G~T 412 (631)
T PHA02792 340 INKYFQKFDNRDPKVVEYILKN--GNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYI-----DDINKIDKHGRS 412 (631)
T ss_pred chHHHHHHHcCCHHHHHHHHHc--CCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcC-----CccccccccCcc
Confidence 3568899999999999999999 77788777664 6899987766654 3578888888 899999999999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCccc
Q 038143 78 AFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 78 pl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
|||+|+..++.+++++|+++|+++
T Consensus 413 PLh~Aa~~~n~eivelLLs~GADI 436 (631)
T PHA02792 413 ILYYCIESHSVSLVEWLIDNGADI 436 (631)
T ss_pred hHHHHHHcCCHHHHHHHHHCCCCC
Confidence 999999999999999999998864
No 73
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.57 E-value=3.8e-14 Score=83.23 Aligned_cols=91 Identities=19% Similarity=0.174 Sum_probs=80.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccc-ccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKI-QNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~g~tpl~~ 81 (103)
.+||+.++-.|+.+....||+. --+++..|.+|.|+|..|+..|+.++++.+++.| +++|. ++..+.||||.
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~--vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~g-----aDvN~~qhg~~YTpLmF 85 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLST--VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELG-----ADVNDKQHGTLYTPLMF 85 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHH--hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhC-----CCcCcccccccccHHHH
Confidence 4789999999999999999988 4458889999999999999999999999999998 77766 44678899999
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
|+..|+.++.+.|++.|++
T Consensus 86 AALSGn~dvcrllldaGa~ 104 (396)
T KOG1710|consen 86 AALSGNQDVCRLLLDAGAR 104 (396)
T ss_pred HHHcCCchHHHHHHhccCc
Confidence 9999999999999998875
No 74
>PHA02792 ankyrin-like protein; Provisional
Probab=99.55 E-value=4.6e-14 Score=90.83 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=76.4
Q ss_pred hHHHHHHHHhCCHH---HHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHH
Q 038143 3 VNCLSKFAMTGQWD---NIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAF 79 (103)
Q Consensus 3 ~~~l~~a~~~g~~~---~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl 79 (103)
.+|||.|+.....+ .++.++.. +++++..|..|.||||+|+..++.+++++|++.| ++++.++..|.||+
T Consensus 375 ~TpLh~A~~n~~~~v~~IlklLIs~--GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~G-----ADIN~kD~~G~TpL 447 (631)
T PHA02792 375 IMPLFPTLSIHESDVLSILKLCKPY--IDDINKIDKHGRSILYYCIESHSVSLVEWLIDNG-----ADINITTKYGSTCI 447 (631)
T ss_pred hhHHHHHHHhccHhHHHHHHHHHhc--CCccccccccCcchHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHH
Confidence 47899877666543 35666777 6778899999999999999999999999999998 99999999999999
Q ss_pred HHHHH--h--------CCHHHHHHHHhcCccc
Q 038143 80 HLAAA--L--------GNEAMCHCMASKDREL 101 (103)
Q Consensus 80 ~~a~~--~--------~~~~~~~~l~~~~~~l 101 (103)
++|.. . ...++++.|++++|.+
T Consensus 448 ~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 448 GICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 99976 2 2256788999988764
No 75
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.55 E-value=1.2e-14 Score=85.50 Aligned_cols=76 Identities=22% Similarity=0.269 Sum_probs=70.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
+-+|||.|+..|+.+.|..+++. ..+++..+..|.||||+||..|...+.+-|+..| +.++..|++|.||+..
T Consensus 67 ddtplhlaaahghrdivqkll~~--kadvnavnehgntplhyacfwgydqiaedli~~g-----a~v~icnk~g~tpldk 139 (448)
T KOG0195|consen 67 DDTPLHLAAAHGHRDIVQKLLSR--KADVNAVNEHGNTPLHYACFWGYDQIAEDLISCG-----AAVNICNKKGMTPLDK 139 (448)
T ss_pred CCcchhhhhhcccHHHHHHHHHH--hcccchhhccCCCchhhhhhhcHHHHHHHHHhcc-----ceeeecccCCCCchhh
Confidence 35799999999999999999999 7789999999999999999999999999999998 9999999999999987
Q ss_pred HHH
Q 038143 82 AAA 84 (103)
Q Consensus 82 a~~ 84 (103)
|.-
T Consensus 140 akp 142 (448)
T KOG0195|consen 140 AKP 142 (448)
T ss_pred hch
Confidence 653
No 76
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.54 E-value=2.8e-14 Score=94.37 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=68.8
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcC--------------CCCCcHHHHHHHhCChhHHHHHHHHhCcccccc
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLT--------------RSGDTALHIAAAAGQTNIVSELVEIMGENASNV 67 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 67 (103)
+.+|||.|+..|+.++|+.|++. +++++..+ ..|.||||.|+..++.+++++|++.+ ++
T Consensus 128 G~TpLhlAa~~~~~eiVklLL~~--GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~g-----ad 200 (743)
T TIGR00870 128 GITALHLAAHRQNYEIVKLLLER--GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDP-----AD 200 (743)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhC--CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCC-----cc
Confidence 46899999999999999999998 44444321 35899999999999999999999988 89
Q ss_pred cccccCCCCcHHHHHHHhC
Q 038143 68 LKIQNDRGDTAFHLAAALG 86 (103)
Q Consensus 68 ~~~~~~~g~tpl~~a~~~~ 86 (103)
++.+|..|+||+|+|+..+
T Consensus 201 in~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 201 ILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred hhhHhhhhhHHHHHHHhhh
Confidence 9999999999999999986
No 77
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.54 E-value=7.9e-14 Score=92.27 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=76.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHH-HHHHhCChhHHHHHHHHhC-cc-----------------
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALH-IAAAAGQTNIVSELVEIMG-EN----------------- 63 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~-~a~~~~~~~~~~~ll~~~~-~~----------------- 63 (103)
..+++.|+..|+.+.++.+++..++.+++..|..|+|||| .|+..++.++++.|++.+. +.
T Consensus 18 ~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v 97 (743)
T TIGR00870 18 EKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAV 97 (743)
T ss_pred HHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHH
Confidence 5678899999999999999887556677778889999999 7777878888888877762 10
Q ss_pred --------ccc-----------ccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 64 --------ASN-----------VLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 64 --------~~~-----------~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
... .....+..|.||||+|+..|+.+++++|+++|+++
T Consensus 98 ~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv 154 (743)
T TIGR00870 98 EAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASV 154 (743)
T ss_pred HHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 000 00112346999999999999999999999998875
No 78
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.53 E-value=2e-13 Score=71.73 Aligned_cols=86 Identities=23% Similarity=0.296 Sum_probs=77.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+++|.|+..++.+.++.++.. +...+..+..|.||+|+|+..++.+++++|+..+ ...+..+..|.||++.|
T Consensus 41 ~~~l~~a~~~~~~~~~~~ll~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~-----~~~~~~~~~~~~~l~~~ 113 (126)
T cd00204 41 RTPLHLAAKNGHLEIVKLLLEK--GADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG-----ADVNARDKDGRTPLHLA 113 (126)
T ss_pred CcHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCcccCCCCCCHHHHH
Confidence 4799999999999999999998 4456677889999999999999999999999987 77788889999999999
Q ss_pred HHhCCHHHHHHHH
Q 038143 83 AALGNEAMCHCMA 95 (103)
Q Consensus 83 ~~~~~~~~~~~l~ 95 (103)
...++.+++++|+
T Consensus 114 ~~~~~~~~~~~Ll 126 (126)
T cd00204 114 AKNGHLEVVKLLL 126 (126)
T ss_pred HhcCCHHHHHHhC
Confidence 9999999998874
No 79
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.53 E-value=8.1e-14 Score=79.78 Aligned_cols=92 Identities=25% Similarity=0.214 Sum_probs=82.3
Q ss_pred chHHHHHHHHhCC-----HHHHHHHHHcCCC-chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCC
Q 038143 2 EVNCLSKFAMTGQ-----WDNIVQAYENNPM-SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRG 75 (103)
Q Consensus 2 ~~~~l~~a~~~g~-----~~~v~~ll~~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g 75 (103)
..+++|.|+..|+ .+.++.++..+.. ...+..+..|.||||+|+..|+.++++.++..+ ++++..+..|
T Consensus 106 g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~-----~~~~~~~~~g 180 (235)
T COG0666 106 GDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAG-----ADPNSRNSYG 180 (235)
T ss_pred CCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcC-----CCCcccccCC
Confidence 3589999999999 9999999999431 256667999999999999999999999999998 8888899999
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcC
Q 038143 76 DTAFHLAAALGNEAMCHCMASKD 98 (103)
Q Consensus 76 ~tpl~~a~~~~~~~~~~~l~~~~ 98 (103)
.|++++|+..++.++++.+++.+
T Consensus 181 ~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 181 VTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999998853
No 80
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.50 E-value=2.4e-14 Score=92.41 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=82.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
..|||+|++.|+.+.++.++.+ +...+....+|.||||.|++.|+.+++.+|+.++ +++-++|..+.|++.+|
T Consensus 83 ~~plhlaaw~g~~e~vkmll~q--~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~-----adp~i~nns~~t~ldlA 155 (854)
T KOG0507|consen 83 ILPLHLAAWNGNLEIVKMLLLQ--TDILNAVNIENETPLHLAAQHGHLEVVFYLLKKN-----ADPFIRNNSKETVLDLA 155 (854)
T ss_pred cceEEehhhcCcchHHHHHHhc--ccCCCcccccCcCccchhhhhcchHHHHHHHhcC-----CCccccCcccccHHHHH
Confidence 3689999999999999999999 4668888999999999999999999999999999 88999999999999999
Q ss_pred HHhCCHHHHHHHHhc
Q 038143 83 AALGNEAMCHCMASK 97 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~ 97 (103)
++.|..+++++|++.
T Consensus 156 ~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 156 SRFGRAEVVQMLLQK 170 (854)
T ss_pred HHhhhhHHHHHHhhh
Confidence 999999999999886
No 81
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.49 E-value=1.5e-13 Score=89.12 Aligned_cols=89 Identities=22% Similarity=0.203 Sum_probs=83.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccc--cccccCCCCcHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNV--LKIQNDRGDTAF 79 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~--~~~~~~~g~tpl 79 (103)
...||-.|+..++.++++.|+++ +++++..|..|+|.||..+..-..++-..+++.+ +. ...+|..|.|||
T Consensus 240 GEyPLSfAAC~nq~eivrlLl~~--gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~g-----a~~l~~v~N~qgLTPL 312 (782)
T KOG3676|consen 240 GEYPLSFAACTNQPEIVRLLLAH--GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELG-----ANALEHVRNNQGLTPL 312 (782)
T ss_pred ccCchHHHHHcCCHHHHHHHHhc--CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcC-----CCccccccccCCCChH
Confidence 45799999999999999999998 8899999999999999999998889999999998 55 889999999999
Q ss_pred HHHHHhCCHHHHHHHHhc
Q 038143 80 HLAAALGNEAMCHCMASK 97 (103)
Q Consensus 80 ~~a~~~~~~~~~~~l~~~ 97 (103)
.+|++.|..++.+.+++.
T Consensus 313 tLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 313 TLAAKLGKKEMFQHILER 330 (782)
T ss_pred HHHHHhhhHHHHHHHHHh
Confidence 999999999999999887
No 82
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=99.46 E-value=2.8e-13 Score=84.35 Aligned_cols=87 Identities=21% Similarity=0.192 Sum_probs=78.6
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
..||..++.|+.+....+|.. |+..|+.+ ..|.||||.|++.|+..-+++|+-+| +++..+|..|.||+.+|
T Consensus 135 rQLhasvRt~nlet~LRll~l--GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG-----AD~~a~d~~GmtP~~~A 207 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSL--GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG-----ADPGAQDSSGMTPVDYA 207 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHc--ccccCCCCcccCCchhHHHHhccchhhhhHHhhcc-----CCCCCCCCCCCcHHHHH
Confidence 478999999999999999999 55555554 67899999999999999999999999 99999999999999999
Q ss_pred HHhCCHHHHHHHHhc
Q 038143 83 AALGNEAMCHCMASK 97 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~ 97 (103)
...||.++.+.|++.
T Consensus 208 R~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 208 RQGGHHELAERLVEI 222 (669)
T ss_pred HhcCchHHHHHHHHH
Confidence 999999999888764
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=3e-13 Score=84.91 Aligned_cols=87 Identities=17% Similarity=0.154 Sum_probs=72.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccc-ccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKI-QNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~g~tpl~~ 81 (103)
-++||.|+.-|+.++|++|+.. ++++|..|..||||||.|+..++..++++|++.| +.+-. .-.++.|+..-
T Consensus 584 ITaLHNAiCaghyeIVkFLi~~--ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~G-----aavfAsTlSDmeTa~eK 656 (752)
T KOG0515|consen 584 ITALHNAICAGHYEIVKFLIEF--GANVNAADSDGWTPLHCAASCNNVPMCKQLVESG-----AAVFASTLSDMETAAEK 656 (752)
T ss_pred hhHHhhhhhcchhHHHHHHHhc--CCcccCccCCCCchhhhhhhcCchHHHHHHHhcc-----ceEEeeecccccchhhh
Confidence 3789999999999999999999 8899999999999999999999999999999998 43333 33577788765
Q ss_pred HHH--hCCHHHHHHHHh
Q 038143 82 AAA--LGNEAMCHCMAS 96 (103)
Q Consensus 82 a~~--~~~~~~~~~l~~ 96 (103)
+-. .|...|..||..
T Consensus 657 Cee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 657 CEEMEEGYDQCSQYLYG 673 (752)
T ss_pred cchhhhhHHHHHHHHHH
Confidence 443 567788888854
No 84
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.44 E-value=1.7e-13 Score=84.95 Aligned_cols=88 Identities=17% Similarity=0.134 Sum_probs=80.8
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
.++++|+..|++..++++... +.+.+..|...+|.||.|+..|+++++++|++. ++.+++.+|..|+|||.-|.
T Consensus 508 i~~~~aa~~GD~~alrRf~l~--g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~----~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 508 INVMYAAKNGDLSALRRFALQ--GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNA----CKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred hhhhhhhhcCCHHHHHHHHHh--cccccccccccchhheeecccCceeHHHHHHHH----HcCCCChhhccCCCcchHhH
Confidence 468999999999999999999 677889999999999999999999999999987 34788899999999999999
Q ss_pred HhCCHHHHHHHHhc
Q 038143 84 ALGNEAMCHCMASK 97 (103)
Q Consensus 84 ~~~~~~~~~~l~~~ 97 (103)
..+|.+++++|-+.
T Consensus 582 ~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEA 595 (622)
T ss_pred hcCcHHHHHHHHHH
Confidence 99999999998653
No 85
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=99.38 E-value=3.7e-12 Score=80.66 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=78.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCC--chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPM--SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..|..|+...++..+..||.++.. .+...-+..|+|+||+||+.|++.+.+.|+.++ .++..+|..|.|+|.|
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg-----~dv~~rda~g~t~l~y 700 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG-----VDVMARDAHGRTALFY 700 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC-----ccceecccCCchhhhh
Confidence 357788888999999999988443 223334667899999999999999999999999 9999999999999999
Q ss_pred HHHhCCHHHHHHHHhcC
Q 038143 82 AAALGNEAMCHCMASKD 98 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~ 98 (103)
|...|.-||+..|++.|
T Consensus 701 ar~a~sqec~d~llq~g 717 (749)
T KOG0705|consen 701 ARQAGSQECIDVLLQYG 717 (749)
T ss_pred HhhcccHHHHHHHHHcC
Confidence 99999999999999985
No 86
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.38 E-value=3.4e-12 Score=83.09 Aligned_cols=91 Identities=15% Similarity=0.073 Sum_probs=80.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhc--------C---------------CCCCcHHHHHHHhCChhHHHHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKL--------T---------------RSGDTALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~--------~---------------~~g~t~l~~a~~~~~~~~~~~ll~~ 59 (103)
.++||+|+.+.+.+.|..|+.. +++++++ + ..|..||..||.-++.+++++|+++
T Consensus 185 qSaLHiAIv~~~~~~V~lLl~~--gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 185 QSALHIAIVNRDAELVRLLLAA--GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cchHHHHHHhccHHHHHHHHHc--CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 5799999999999999999998 4444431 1 1367899999999999999999999
Q ss_pred hCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 60 MGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 60 ~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
+ ++++.+|..|+|.||..+..-..++..++++.|+.
T Consensus 263 g-----Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 263 G-----ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred C-----CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8 99999999999999999999888999999998875
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.37 E-value=6.7e-12 Score=73.98 Aligned_cols=89 Identities=20% Similarity=0.221 Sum_probs=78.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++|.+|+..|+.+.|+.+|+.+.+.+. ..+..+.||||.|+.+|+.++.+.|++.| +.....|.-|.|+...|
T Consensus 46 Ms~LahAaykGnl~~v~lll~~gaDvN~-~qhg~~YTpLmFAALSGn~dvcrllldaG-----a~~~~vNsvgrTAaqmA 119 (396)
T KOG1710|consen 46 MSVLAHAAYKGNLTLVELLLELGADVND-KQHGTLYTPLMFAALSGNQDVCRLLLDAG-----ARMYLVNSVGRTAAQMA 119 (396)
T ss_pred ccHHHHHHhcCcHHHHHHHHHhCCCcCc-ccccccccHHHHHHHcCCchHHHHHHhcc-----CccccccchhhhHHHHH
Confidence 4689999999999999999999444332 34778899999999999999999999998 88889999999999999
Q ss_pred HHhCCHHHHHHHHhc
Q 038143 83 AALGNEAMCHCMASK 97 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~ 97 (103)
+.-|+.+++..+-.+
T Consensus 120 AFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 120 AFVGHHECVAIINNH 134 (396)
T ss_pred HHhcchHHHHHHhcc
Confidence 999999999877543
No 88
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.37 E-value=3.1e-12 Score=80.08 Aligned_cols=88 Identities=22% Similarity=0.212 Sum_probs=77.8
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHH
Q 038143 5 CLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAA 84 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~ 84 (103)
|+|.+....+.+.+.+.+.......+...|..|.||||+|+..|+...++.|+..+ +++..+|+.|++|||-|+.
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~-----Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAG-----ADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcC-----CCccccccccccHHHHHHH
Confidence 58899999999988887766445667788999999999999999999999999998 9999999999999999999
Q ss_pred hCCHHHHHHHHhc
Q 038143 85 LGNEAMCHCMASK 97 (103)
Q Consensus 85 ~~~~~~~~~l~~~ 97 (103)
.|+.+++..++.+
T Consensus 98 ~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 98 TGNEQIITEVLRH 110 (560)
T ss_pred cCCHHHHHHHHHH
Confidence 9999887666554
No 89
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=1e-11 Score=57.24 Aligned_cols=40 Identities=23% Similarity=0.169 Sum_probs=27.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIA 44 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a 44 (103)
.+|||.|+..|+.++++.|+.. +.+++.+|..|+||||+|
T Consensus 17 ~T~LH~A~~~g~~~~v~~Ll~~--g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 17 NTPLHWAARYGHSEVVRLLLQN--GADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --HHHHHHHHT-HHHHHHHHHC--T--TT---TTS--HHHH-
T ss_pred CcHHHHHHHcCcHHHHHHHHHC--cCCCCCCcCCCCCHHHhC
Confidence 5899999999999999999966 788999999999999987
No 90
>PF13606 Ank_3: Ankyrin repeat
Probab=99.27 E-value=9.6e-12 Score=50.08 Aligned_cols=28 Identities=29% Similarity=0.519 Sum_probs=20.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 74 RGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 74 ~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|+||||+|+..|+.+++++|++.|+++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 4677777777777777777777777654
No 91
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.21 E-value=5.2e-11 Score=78.32 Aligned_cols=80 Identities=16% Similarity=0.078 Sum_probs=65.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCc--ccccccccccCCCCcHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGE--NASNVLKIQNDRGDTAF 79 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~~~~~~g~tpl 79 (103)
..+|||.|+..|+.+.++.|+.. +.+++..|..|.||||+|+..++.+++++|++++.. ...+..+..+..|.+|+
T Consensus 115 G~TpLh~Aa~~g~~eiv~~LL~~--Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~ 192 (664)
T PTZ00322 115 GRTPLHIACANGHVQVVRVLLEF--GADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPS 192 (664)
T ss_pred CCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCcc
Confidence 36899999999999999999999 777888999999999999999999999999998200 11266666777777776
Q ss_pred HHHH
Q 038143 80 HLAA 83 (103)
Q Consensus 80 ~~a~ 83 (103)
..+.
T Consensus 193 ~~~~ 196 (664)
T PTZ00322 193 LEDS 196 (664)
T ss_pred chhh
Confidence 6544
No 92
>PF13606 Ank_3: Ankyrin repeat
Probab=99.15 E-value=6.8e-11 Score=47.58 Aligned_cols=25 Identities=44% Similarity=0.627 Sum_probs=23.3
Q ss_pred CCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 36 SGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
+|+||||+|++.|+.+++++|++.|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 4899999999999999999999988
No 93
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.15 E-value=3.4e-11 Score=79.34 Aligned_cols=75 Identities=19% Similarity=0.121 Sum_probs=38.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
|++||.++..|....+++||.+ |.++...| .+|+|+||.|..+|+++++-.|+.+| ....++|..|.+||..
T Consensus 53 R~alH~~~S~~k~~~l~wLlqh--Gidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g-----~SL~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 53 RTALHIAVSENKNSFLRWLLQH--GIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKG-----RSLRIKDKEGLSPLQF 125 (1267)
T ss_pred cceeeeeeccchhHHHHHHHhc--CceeeeccccccchHhhHhhhhchHHHHHHHHhcC-----CceEEecccCCCHHHH
Confidence 4455555555555555555555 33333333 34555555555555555555555555 4455555555555554
Q ss_pred HHH
Q 038143 82 AAA 84 (103)
Q Consensus 82 a~~ 84 (103)
.++
T Consensus 126 ~~r 128 (1267)
T KOG0783|consen 126 LSR 128 (1267)
T ss_pred Hhh
Confidence 443
No 94
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.14 E-value=1.1e-10 Score=48.03 Aligned_cols=24 Identities=42% Similarity=0.570 Sum_probs=14.7
Q ss_pred CCcHHHHHHHhCChhHHHHHHHHh
Q 038143 37 GDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 37 g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
|.||||+|+..++.+++++|++.|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~g 25 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHG 25 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCc
Confidence 556666666666666666666655
No 95
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.13 E-value=1.3e-10 Score=47.84 Aligned_cols=28 Identities=21% Similarity=0.449 Sum_probs=26.2
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 74 RGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 74 ~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|.||||+|+..|+.+++++|+++|+++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence 5899999999999999999999999875
No 96
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.13 E-value=3.5e-10 Score=72.27 Aligned_cols=90 Identities=22% Similarity=0.278 Sum_probs=75.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+-||+|+..|+.+.|+.+|.+.|.-..+..|..|.|+||-|+..++..+.++|++.| +.+...|..|.||-.-|
T Consensus 900 ~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdag-----asl~ktd~kg~tp~era 974 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAG-----ASLRKTDSKGKTPQERA 974 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcc-----hhheecccCCCChHHHH
Confidence 4568888888888888888888877667778888888888888888888888888888 77888888888888888
Q ss_pred HHhCCHHHHHHHHhc
Q 038143 83 AALGNEAMCHCMASK 97 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~ 97 (103)
...|..++..||-++
T Consensus 975 qqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 975 QQAGDPDLAAYLESR 989 (1004)
T ss_pred HhcCCchHHHHHhhh
Confidence 888888888887654
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=99.07 E-value=2e-10 Score=75.92 Aligned_cols=80 Identities=28% Similarity=0.274 Sum_probs=68.4
Q ss_pred HHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccccc-CCCCcHHHHHHHhCCHHHHHHHH
Q 038143 17 NIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN-DRGDTAFHLAAALGNEAMCHCMA 95 (103)
Q Consensus 17 ~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~ 95 (103)
.++-++.+.-+-..+..|..|+|+||+++..+...++++|+++| .++..+| ..|+||||-|..+|+.+++-.|+
T Consensus 32 qlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhG-----idv~vqD~ESG~taLHRaiyyG~idca~lLL 106 (1267)
T KOG0783|consen 32 QLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHG-----IDVFVQDEESGYTALHRAIYYGNIDCASLLL 106 (1267)
T ss_pred HHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcC-----ceeeeccccccchHhhHhhhhchHHHHHHHH
Confidence 35555555323236778999999999999999999999999999 8888998 47999999999999999999999
Q ss_pred hcCccc
Q 038143 96 SKDREL 101 (103)
Q Consensus 96 ~~~~~l 101 (103)
.+|..|
T Consensus 107 ~~g~SL 112 (1267)
T KOG0783|consen 107 SKGRSL 112 (1267)
T ss_pred hcCCce
Confidence 998765
No 98
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=99.02 E-value=1.1e-09 Score=70.06 Aligned_cols=94 Identities=21% Similarity=0.280 Sum_probs=79.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+.+..|+..+++-.+...... +...-..+....+.||+|+..|+.++++++++++ ....+++.|..|.|+||-|+
T Consensus 868 eeil~av~~~D~~klqE~h~~--gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~---p~elld~~de~get~lhkaa 942 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHLN--GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHG---PSELLDMADETGETALHKAA 942 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHhc--CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcC---CHHHHHHHhhhhhHHHHHHH
Confidence 346788888888777777777 3334456778899999999999999999999998 34667888999999999999
Q ss_pred HhCCHHHHHHHHhcCcccc
Q 038143 84 ALGNEAMCHCMASKDRELI 102 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~~l~ 102 (103)
..++-.+.++|++.|++|.
T Consensus 943 ~~~~r~vc~~lvdagasl~ 961 (1004)
T KOG0782|consen 943 CQRNRAVCQLLVDAGASLR 961 (1004)
T ss_pred HhcchHHHHHHHhcchhhe
Confidence 9999999999999998875
No 99
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.92 E-value=5.3e-10 Score=76.09 Aligned_cols=88 Identities=17% Similarity=0.228 Sum_probs=53.8
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccc-ccCCCCcHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKI-QNDRGDTAFHLA 82 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-~~~~g~tpl~~a 82 (103)
++|-.||..|+.+.|+.++.+ +.++.-+|..|.+||.+|+..||..+|+.|+... +++.. .|+.+.|+|-+|
T Consensus 759 t~LT~acaggh~e~vellv~r--ganiehrdkkgf~plImaatagh~tvV~~llk~h-----a~veaQsdrtkdt~lSla 831 (2131)
T KOG4369|consen 759 TNLTSACAGGHREEVELLVVR--GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAH-----ADVEAQSDRTKDTMLSLA 831 (2131)
T ss_pred ccccccccCccHHHHHHHHHh--cccccccccccchhhhhhcccCchHHHHHHHhhh-----hhhhhhcccccCceEEEe
Confidence 456667777777777777776 5566666777777777777777777777666654 33322 334455555555
Q ss_pred HHhCCHHHHHHHHhcC
Q 038143 83 AALGNEAMCHCMASKD 98 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~ 98 (103)
|..|..++++.|+..+
T Consensus 832 csggr~~vvelLl~~g 847 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAG 847 (2131)
T ss_pred cCCCcchHHHHHHHhh
Confidence 5555555555555443
No 100
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.89 E-value=8.8e-09 Score=68.04 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=78.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCC--chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCc------------------
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPM--SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGE------------------ 62 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~--~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~------------------ 62 (103)
...+..|+..|+...|+.++..... .+.+..|.-|+++|++|..+.+.++++.|++..-.
T Consensus 26 e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE 105 (822)
T KOG3609|consen 26 EKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVE 105 (822)
T ss_pred hHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHH
Confidence 4567789999999999999987554 77888999999999999999999999988887411
Q ss_pred -------------ccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 63 -------------NASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 63 -------------~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
.........-..+.||+.+|+-.++.||+++|+.+|+.+
T Consensus 106 ~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i 157 (822)
T KOG3609|consen 106 LLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI 157 (822)
T ss_pred HHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence 000111123345789999999999999999999998764
No 101
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.84 E-value=2.5e-09 Score=72.96 Aligned_cols=94 Identities=23% Similarity=0.234 Sum_probs=78.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
+.||..|+--|+...|..++..+.+. --..|+.+.|+|.+||..|..++++.|+..+ +.-..++....||+.+|
T Consensus 791 f~plImaatagh~tvV~~llk~ha~v-eaQsdrtkdt~lSlacsggr~~vvelLl~~g-----ankehrnvsDytPlsla 864 (2131)
T KOG4369|consen 791 FVPLIMAATAGHITVVQDLLKAHADV-EAQSDRTKDTMLSLACSGGRTRVVELLLNAG-----ANKEHRNVSDYTPLSLA 864 (2131)
T ss_pred chhhhhhcccCchHHHHHHHhhhhhh-hhhcccccCceEEEecCCCcchHHHHHHHhh-----ccccccchhhcCchhhh
Confidence 56888999999999998888884433 2245888999999999999999999999988 66667777888999999
Q ss_pred HHhCCHHHHHHHHhcCcccc
Q 038143 83 AALGNEAMCHCMASKDRELI 102 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l~ 102 (103)
...|..++++.|++.|+++-
T Consensus 865 ~Sggy~~iI~~llS~GseIn 884 (2131)
T KOG4369|consen 865 RSGGYTKIIHALLSSGSEIN 884 (2131)
T ss_pred cCcchHHHHHHHhhcccccc
Confidence 99999999999998887753
No 102
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.80 E-value=2.8e-08 Score=60.94 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=52.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
...|+.||+.|+.+.|+.+++. +.++|..|....+||.+|+..||.+++++|+++|
T Consensus 37 f~elceacR~GD~d~v~~LVet--gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenG 92 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVET--GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENG 92 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHh--CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcC
Confidence 3568999999999999999997 8899999999999999999999999999999997
No 103
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.67 E-value=7.2e-08 Score=59.25 Aligned_cols=57 Identities=21% Similarity=0.173 Sum_probs=53.7
Q ss_pred CcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCc
Q 038143 38 DTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDR 99 (103)
Q Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 99 (103)
.--|..||+.|..+.++.|++.| .++|..|.-..+||.+|+.-||.+++++|+++|+
T Consensus 37 f~elceacR~GD~d~v~~LVetg-----vnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETG-----VNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhC-----CCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 34588999999999999999998 9999999999999999999999999999999986
No 104
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.61 E-value=1.3e-07 Score=53.04 Aligned_cols=66 Identities=24% Similarity=0.200 Sum_probs=54.2
Q ss_pred chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhc
Q 038143 28 SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASK 97 (103)
Q Consensus 28 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 97 (103)
.+++..|..|||+++.|+..|+.+.+.+|+.+| .+.+...|..+.+.+.+|-+.|..++++.|-+.
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg----~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRG----VAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhccC----cccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 457788888899999988888888888888886 256777888888888888888888888877654
No 105
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.58 E-value=8.6e-08 Score=64.17 Aligned_cols=82 Identities=22% Similarity=0.215 Sum_probs=70.3
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
+.++||.|+..|..-.++.++.. +.+++..|..|++|+|.+...|+...+..+++++ +..++.+..|.+|+++
T Consensus 656 ~~s~lh~a~~~~~~~~~e~ll~~--ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~-----a~~~a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 656 GCSLLHVAVGTGDSGAVELLLQN--GADVNALDSKGRTPLHHATASGHTSIACLLLKRG-----ADPNAFDPDGKLPLDI 728 (785)
T ss_pred ccchhhhhhccchHHHHHHHHhc--CCcchhhhccCCCcchhhhhhcccchhhhhcccc-----ccccccCccCcchhhH
Confidence 46789999999999988888888 6678889999999999999999999998888888 8888889999999999
Q ss_pred HHHhCCHHH
Q 038143 82 AAALGNEAM 90 (103)
Q Consensus 82 a~~~~~~~~ 90 (103)
|....+.++
T Consensus 729 a~~~~~~d~ 737 (785)
T KOG0521|consen 729 AMEAANADI 737 (785)
T ss_pred HhhhccccH
Confidence 877655443
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.55 E-value=4.2e-08 Score=66.07 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=25.2
Q ss_pred cccccccCCCCcHHHHHHHhCCHHHHHHHHhcCc
Q 038143 66 NVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDR 99 (103)
Q Consensus 66 ~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 99 (103)
..++.+|..|+||||||+.+|+..++..|++.|+
T Consensus 632 ~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga 665 (975)
T KOG0520|consen 632 VAIDIRDRNGWTPLHWAAFRGREKLVASLIELGA 665 (975)
T ss_pred cccccccCCCCcccchHhhcCHHHHHHHHHHhcc
Confidence 5667777778888888888887777777776544
No 107
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.53 E-value=3.3e-07 Score=58.27 Aligned_cols=56 Identities=16% Similarity=0.158 Sum_probs=50.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
++|||.|+..|+..+++.++.. ++....++..||++||-|+..|+..++..++.+.
T Consensus 56 ~TpLhlAV~Lg~~~~a~~Ll~a--~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~ 111 (560)
T KOG0522|consen 56 RTPLHLAVRLGHVEAARILLSA--GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHL 111 (560)
T ss_pred CccHHHHHHhcCHHHHHHHHhc--CCCccccccccccHHHHHHHcCCHHHHHHHHHHh
Confidence 5899999999999999999999 6667788999999999999999998888777664
No 108
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.38 E-value=1e-06 Score=56.83 Aligned_cols=56 Identities=20% Similarity=0.041 Sum_probs=49.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
+++||.||..|++.....|+ .+ +.++...|..|+|+|.||-+.|..+++..|+++|
T Consensus 662 rt~LHLa~~~gnVvl~QLLi-Wy-g~dv~~rda~g~t~l~yar~a~sqec~d~llq~g 717 (749)
T KOG0705|consen 662 RTALHLAARKGNVVLAQLLI-WY-GVDVMARDAHGRTALFYARQAGSQECIDVLLQYG 717 (749)
T ss_pred cchhhhhhhhcchhHHHHHH-Hh-CccceecccCCchhhhhHhhcccHHHHHHHHHcC
Confidence 78999999999988655555 43 6778889999999999999999999999999998
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.23 E-value=5.6e-07 Score=60.95 Aligned_cols=87 Identities=22% Similarity=0.231 Sum_probs=65.4
Q ss_pred HHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccc-ccccccccCCCCcHHHHHHHhCCH
Q 038143 10 AMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENA-SNVLKIQNDRGDTAFHLAAALGNE 88 (103)
Q Consensus 10 ~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~g~tpl~~a~~~~~~ 88 (103)
|..+.+++...++... +..++.+|..||||||+|+..|+..++..|...+++.. -.+++..+..|.|+..+|...|+.
T Consensus 615 ca~lg~ewA~ll~~~~-~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~ 693 (975)
T KOG0520|consen 615 CAALGYEWAFLPISAD-GVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHK 693 (975)
T ss_pred hhhcCCceeEEEEeec-ccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccccc
Confidence 4555555555555443 45688899999999999999999999999998873322 233445556799999999999999
Q ss_pred HHHHHHHhc
Q 038143 89 AMCHCMASK 97 (103)
Q Consensus 89 ~~~~~l~~~ 97 (103)
.+..+|-+.
T Consensus 694 gia~~lse~ 702 (975)
T KOG0520|consen 694 GIAGYLSEK 702 (975)
T ss_pred chHHHHhhh
Confidence 888777553
No 110
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.18 E-value=1.7e-06 Score=58.28 Aligned_cols=62 Identities=21% Similarity=0.336 Sum_probs=57.3
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 34 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
-..|.|+||.|+..+..-+.++|++.+ ++++..|..|.||+|.+...|+...+..+++++++
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~g-----a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~ 714 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNG-----ADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD 714 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcC-----CcchhhhccCCCcchhhhhhcccchhhhhcccccc
Confidence 356899999999999999999999999 88999999999999999999999999988888764
No 111
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.17 E-value=1.1e-06 Score=55.54 Aligned_cols=58 Identities=19% Similarity=0.105 Sum_probs=52.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
+++.||.|+..|+.+.++.++... +.+.+.+|..|+|||.-|...+|.+++++|-+..
T Consensus 539 ~RTaLHvAAaEG~v~v~kfl~~~~-kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 539 DRTALHVAAAEGHVEVVKFLLNAC-KVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred cchhheeecccCceeHHHHHHHHH-cCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 578999999999999999999884 4678889999999999999999999999888764
No 112
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=98.09 E-value=9.5e-06 Score=31.05 Aligned_cols=26 Identities=35% Similarity=0.497 Sum_probs=18.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 75 GDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 75 g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
|.||+|+++..++.+++++|++.+.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 56777777777777777777776654
No 113
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.97 E-value=2.2e-05 Score=50.16 Aligned_cols=56 Identities=23% Similarity=0.139 Sum_probs=49.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
-+|||.|++.|+.-.++.|+.. |+++...|.+|.||+.+|-..||-++.+-|++..
T Consensus 168 ~TpLHvAAk~Gq~~Q~ElL~vY--GAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 168 NTPLHVAAKAGQILQAELLAVY--GADPGAQDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred CchhHHHHhccchhhhhHHhhc--cCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 4799999999999999999888 7889999999999999999999988777666543
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.91 E-value=3.6e-05 Score=49.20 Aligned_cols=46 Identities=28% Similarity=0.268 Sum_probs=41.9
Q ss_pred CCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHH
Q 038143 34 TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAA 84 (103)
Q Consensus 34 ~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~ 84 (103)
+..-.|+||+|+..|...++.++++.+ +++..+|..|.||..++..
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg-----~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEG-----CDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhc-----CCchhcccCCCCccccccc
Confidence 445689999999999999999999998 9999999999999999883
No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.73 E-value=0.0002 Score=40.68 Aligned_cols=58 Identities=19% Similarity=0.098 Sum_probs=52.8
Q ss_pred CchHHHHHHHHhCCHHHHHHHHHcCCC-chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 1 MEVNCLSKFAMTGQWDNIVQAYENNPM-SREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 1 ~~~~~l~~a~~~g~~~~v~~ll~~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
+.+++++.|++.|..+.+..++.. + +.+...|.++.+.+.+|-..|..++++.|.+..
T Consensus 11 fgWTalmcaa~eg~~eavsyllgr--g~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 11 FGWTALMCAAMEGSNEAVSYLLGR--GVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred hcchHHHHHhhhcchhHHHHHhcc--CcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 457999999999999999999998 5 567788999999999999999999999999875
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.67 E-value=0.00011 Score=27.88 Aligned_cols=25 Identities=36% Similarity=0.541 Sum_probs=20.5
Q ss_pred CCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 36 SGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
.|.|++|+++..++.++++.+++.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3678888888888888888888875
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.80 E-value=0.0055 Score=41.87 Aligned_cols=59 Identities=14% Similarity=-0.041 Sum_probs=45.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCc--------hhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMS--------REAKLTRSGDTALHIAAAAGQTNIVSELVEIMG 61 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~--------~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 61 (103)
..+|.+|+..|..+.|+.++..-... ........+.|||.+||..++.+++++|+++|.
T Consensus 89 gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 89 GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 46788999999999998888762211 011223567999999999999999999999983
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.79 E-value=0.0012 Score=42.54 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=38.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAA 45 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~ 45 (103)
.++||+|+..|...+|..+|+. +++....|..|.||..++.
T Consensus 431 sT~LH~aa~qg~~k~v~~~Lee--g~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 431 STFLHYAAAQGARKCVKYFLEE--GCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred chHHHHHHhcchHHHHHHHHHh--cCCchhcccCCCCcccccc
Confidence 5899999999999999999999 6889999999999999977
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.83 E-value=0.089 Score=31.21 Aligned_cols=93 Identities=10% Similarity=-0.042 Sum_probs=59.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCC----CCCcHHHHHHHh--CChhHHHHHHHHh-CcccccccccccCCC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTR----SGDTALHIAAAA--GQTNIVSELVEIM-GENASNVLKIQNDRG 75 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~----~g~t~l~~a~~~--~~~~~~~~ll~~~-~~~~~~~~~~~~~~g 75 (103)
..++.+++..+..+.+..++.+ ++....|- .+.--+.++... .+..++++.+++| .+. ...-.+-+.|
T Consensus 180 ~~Am~~si~~~K~dva~~lls~---f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~v--N~~F~~~NSG 254 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSK---FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDV--NKKFQKVNSG 254 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhh---cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhcccccc--chhhhccCCc
Confidence 3567777777777777777765 22222221 122234555443 3456888888887 111 1112244679
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 76 DTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 76 ~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
.|.|.-|.++++.+++.+|+..|+-
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCcc
Confidence 9999999999999999999999873
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.43 E-value=0.19 Score=24.34 Aligned_cols=21 Identities=24% Similarity=0.246 Sum_probs=10.4
Q ss_pred cHHHHHHHhCChhHHHHHHHH
Q 038143 39 TALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 39 t~l~~a~~~~~~~~~~~ll~~ 59 (103)
..+..|...-+.+++++|++.
T Consensus 34 ~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 34 DCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHHhhHHHHHHHHHh
Confidence 345555555555555555543
No 121
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.00 E-value=0.77 Score=22.19 Aligned_cols=47 Identities=13% Similarity=0.187 Sum_probs=38.4
Q ss_pred cHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhc
Q 038143 39 TALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASK 97 (103)
Q Consensus 39 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 97 (103)
..+..|...|+.++++.+++.+ . ++ ...+..|...-+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-----~-~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-----K-PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-----c-cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4578999999999999999874 1 11 3479999999999999999886
No 122
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=89.84 E-value=1.2 Score=25.62 Aligned_cols=45 Identities=20% Similarity=0.185 Sum_probs=34.4
Q ss_pred HHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHh
Q 038143 41 LHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMAS 96 (103)
Q Consensus 41 l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~ 96 (103)
|..|+.+|....+...+++| .+++. +.+..|+..++-.++.+++.
T Consensus 147 l~~a~~kgll~F~letlkyg-----g~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYG-----GNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcC-----CcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 56688888888888788877 44332 68888999999888888764
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=86.80 E-value=2.3 Score=25.59 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=35.1
Q ss_pred CCHHHHHHHHHcCCCchhhh---cCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 13 GQWDNIVQAYENNPMSREAK---LTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 13 g~~~~v~~ll~~~~~~~~~~---~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
.+...++.+|..+- ..++. ...+|.|-|.-|..+++.+++..|+++|
T Consensus 228 a~~kvL~~Fi~~Gl-v~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~G 277 (284)
T PF06128_consen 228 ASYKVLEYFINRGL-VDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYG 277 (284)
T ss_pred CcHHHHHHHHhccc-cccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcC
Confidence 34556666666622 22332 3578999999999999999999999998
No 124
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=85.52 E-value=3.3 Score=23.96 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=35.5
Q ss_pred HHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHH
Q 038143 6 LSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVE 58 (103)
Q Consensus 6 l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 58 (103)
|..|+..|-++.+.+.++.+ .+++ .+.|..|+.+++..++.+++.
T Consensus 147 l~~a~~kgll~F~letlkyg--g~~~------~~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYG--GNVD------IIVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcC--Cccc------HHHHHHHHHhhHHHHHHHhhc
Confidence 56788999999999999883 3232 278999999999998887653
No 125
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=78.43 E-value=1.8 Score=25.87 Aligned_cols=32 Identities=19% Similarity=0.093 Sum_probs=15.9
Q ss_pred hhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 29 REAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 29 ~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
..|..|..+.|+=.+|-..++...-+.|++.+
T Consensus 7 ~wn~id~~n~t~gd~a~ern~~rly~~lv~~g 38 (271)
T KOG1709|consen 7 GWNFIDYENKTVGDLALERNQSRLYRRLVEAG 38 (271)
T ss_pred CccccChhhCCchHHHHHccHHHHHHHHHHcC
Confidence 34444555555555555555555555555443
No 126
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=63.80 E-value=14 Score=17.43 Aligned_cols=23 Identities=13% Similarity=0.052 Sum_probs=18.1
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCC
Q 038143 5 CLSKFAMTGQWDNIVQAYENNPM 27 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~~~~ 27 (103)
++..+|..|+.+.+..++..+.+
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y~~ 24 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHYEP 24 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Confidence 56778888999998888887544
No 127
>PF05476 PET122: PET122; InterPro: IPR008732 The nuclear PET122 gene of Saccharomyces cerevisiae encodes a mitochondrial-localised protein that activates initiation of translation of the mitochondrial mRNA from the COX3 gene, which encodes subunit III of cytochrome c oxidase [].; GO: 0003743 translation initiation factor activity, 0006413 translational initiation, 0005740 mitochondrial envelope
Probab=58.75 E-value=27 Score=21.49 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=37.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCC-CCcHHHHHHHhCChhHHHHHHHHh
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRS-GDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
++.++.-|.+|+++.|...+..-|. +..|.+ =.+-|.-+|+.||.+.+.++....
T Consensus 14 r~~l~~~CLNr~Fd~vL~~~R~~p~---~emd~~fLq~yL~~S~qwgHv~Si~yIW~k~ 69 (267)
T PF05476_consen 14 RRRLYLQCLNREFDDVLAELRQIPV---DEMDYSFLQLYLARSCQWGHVPSIDYIWYKY 69 (267)
T ss_pred HHHHHHHHhhhhHHHHHHHHHcCcH---hHhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 4678888999999999888887442 111211 123456689999999888876653
No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=55.70 E-value=15 Score=21.87 Aligned_cols=53 Identities=15% Similarity=0.265 Sum_probs=35.1
Q ss_pred cCCCCCcHHHHHHHhCChhHHH-HHHHHhCcccccccccccCCCCcHHHHHHHhC
Q 038143 33 LTRSGDTALHIAAAAGQTNIVS-ELVEIMGENASNVLKIQNDRGDTAFHLAAALG 86 (103)
Q Consensus 33 ~~~~g~t~l~~a~~~~~~~~~~-~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~ 86 (103)
.+.....|||-++.-+..+++- ++++.. ...+...+-.|.+|..+|.+|..+.
T Consensus 218 Id~kTe~~LHk~iki~REDVl~LYfie~d-akiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 218 IDGKTENPLHKAIKIEREDVLFLYFIEMD-AKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred HcCCCcchhHHhhhccccceeeehhhhcc-ccccccccccCCCchHHHHHHHHHH
Confidence 3455567889888888777544 344442 1123556777888999998887654
No 129
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=54.45 E-value=8.8 Score=25.85 Aligned_cols=67 Identities=9% Similarity=0.047 Sum_probs=38.5
Q ss_pred hCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 12 TGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 12 ~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
.|-++.+.....+ +...++.....++++|+.+...++.+.+....... ....+..+..+.++..+..
T Consensus 153 lg~vs~l~~v~lk-~k~~p~~l~gq~sp~lll~~~s~h~~~v~~d~~~~----~~~rn~~~~~~re~~~~~e 219 (558)
T KOG4335|consen 153 LGLVSPLLEVQLK-PKHQPNYLLGQQSPELLLRFTSAHDDDVAMDEPFL----QFRRNVFFPKGRELQIIDE 219 (558)
T ss_pred eeccCHHHHHhhc-cccCCchhhccCCchhhhhccCCchhhhhccccch----HHhhhhhcccCcchhhhHH
Confidence 3333333333333 13445566778889999988888877766544432 1333445566777765544
No 130
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=52.88 E-value=2.7 Score=28.66 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=26.1
Q ss_pred chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHh
Q 038143 28 SREAKLTRSGDTALHIAAAAGQTNIVSELVEIM 60 (103)
Q Consensus 28 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 60 (103)
...+..|..|.+|+|+++..|...+++.++...
T Consensus 420 ~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~ 452 (605)
T KOG3836|consen 420 AHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCK 452 (605)
T ss_pred CccchhcccccccccccCCCCCHHHhhhhhhhh
Confidence 345566788999999999999988888877654
No 131
>PF08898 DUF1843: Domain of unknown function (DUF1843); InterPro: IPR014994 This domain is found in functionally uncharacterised proteins. It can be found independently or at the C terminus of the protein.
Probab=51.60 E-value=24 Score=15.99 Aligned_cols=21 Identities=5% Similarity=0.091 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHc
Q 038143 4 NCLSKFAMTGQWDNIVQAYEN 24 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~ 24 (103)
-+++.|+..|++..++.+...
T Consensus 5 vaiq~AiasGDLa~MK~l~~~ 25 (53)
T PF08898_consen 5 VAIQQAIASGDLAQMKALAAQ 25 (53)
T ss_pred HHHHHHHHcCcHHHHHHHHHH
Confidence 467889999999888888766
No 132
>COG1732 OpuBC Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]
Probab=49.64 E-value=21 Score=22.44 Aligned_cols=36 Identities=28% Similarity=0.277 Sum_probs=22.8
Q ss_pred HHHHHHHHcCCCchhhhcCCCCCcHH-HHHHHhCChhH
Q 038143 16 DNIVQAYENNPMSREAKLTRSGDTAL-HIAAAAGQTNI 52 (103)
Q Consensus 16 ~~v~~ll~~~~~~~~~~~~~~g~t~l-~~a~~~~~~~~ 52 (103)
+++.++|+++ +.....+..-|.|++ |-|...|.+++
T Consensus 50 ~m~~~lle~~-~~kv~~~~~lG~t~v~~~Al~~G~IDi 86 (300)
T COG1732 50 NILKQLLEKN-GIKVEDKTGLGGTAVVRNALKSGDIDI 86 (300)
T ss_pred HHHHHHHHhc-CCceeeccCCCchHHHHHHHHcCCCCe
Confidence 3455666665 555555666777744 77777777663
No 133
>PRK10548 flagellar biosynthesis protein FliT; Provisional
Probab=43.71 E-value=42 Score=18.06 Aligned_cols=20 Identities=25% Similarity=0.647 Sum_probs=15.4
Q ss_pred HHHHHHHhCCHHHHHHHHHc
Q 038143 5 CLSKFAMTGQWDNIVQAYEN 24 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~ 24 (103)
.+..++..|+|+.+..+=..
T Consensus 20 ~ML~aA~~g~Wd~Li~lE~~ 39 (121)
T PRK10548 20 SMLRLATEGQWDELIEQEVA 39 (121)
T ss_pred HHHHHHHHCCHHHHHHHHHH
Confidence 45678899999988777555
No 134
>PF12854 PPR_1: PPR repeat
Probab=39.17 E-value=30 Score=13.56 Aligned_cols=19 Identities=11% Similarity=0.468 Sum_probs=13.4
Q ss_pred HHHHHHhCCHHHHHHHHHc
Q 038143 6 LSKFAMTGQWDNIVQAYEN 24 (103)
Q Consensus 6 l~~a~~~g~~~~v~~ll~~ 24 (103)
++-.|+.|+++....++++
T Consensus 14 I~~~Ck~G~~~~A~~l~~~ 32 (34)
T PF12854_consen 14 IDGYCKAGRVDEAFELFDE 32 (34)
T ss_pred HHHHHHCCCHHHHHHHHHh
Confidence 3456677888888777764
No 135
>PF12997 DUF3881: Domain of unknown function, E. rectale Gene description (DUF3881); InterPro: IPR024541 This entry represents proteins of unknown function found primarily in Firmicutes. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=34.46 E-value=42 Score=21.02 Aligned_cols=23 Identities=26% Similarity=0.137 Sum_probs=18.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHc
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYEN 24 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~ 24 (103)
.|..|..||+.|+.+.++.|=..
T Consensus 166 ~R~~Li~AAk~GDedAiEsLTle 188 (283)
T PF12997_consen 166 NRNMLIEAAKNGDEDAIESLTLE 188 (283)
T ss_pred HHHHHHHHHHcCCHHHHHhccHH
Confidence 36788999999999988766443
No 136
>TIGR02957 SigX4 RNA polymerase sigma-70 factor, TIGR02957 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building and bidirectional best hits, to represent a conserved family. This family is found in a limited number of bacterial lineages. This family includes apparent paralogous expansion in Streptomyces coelicolor A3(2), and multiple copies in Mycobacterium smegmatis MC2, Streptomyces avermitilis MA-4680 and Nocardia farcinica IFM10152.
Probab=34.11 E-value=52 Score=20.23 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVE 58 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 58 (103)
..+..|+..|+.+.+..+|.. +... ..|..|..|--.....|...+..++..
T Consensus 171 ~~f~~a~~~gD~~~l~~lL~~--dv~~-~~dggg~~~~~~~p~~G~~~v~~~~~~ 222 (281)
T TIGR02957 171 ERFVEAAQTGDLDGLLELLAE--DVVL-YGDGGGKVRAALRPIYGADRVARFFFG 222 (281)
T ss_pred HHHHHHHHhCCHHHHHHHHhh--ceEE-EecCCCcCCCCCcccccHHHHHHHHHH
Confidence 457788899999999999988 4422 334444433222234455566666544
No 137
>KOG4032 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.40 E-value=77 Score=18.52 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=18.5
Q ss_pred HHHHHHHhCCHHHHHHHHHcCC
Q 038143 5 CLSKFAMTGQWDNIVQAYENNP 26 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~~~ 26 (103)
.++..|..++...+..++.+.+
T Consensus 96 n~f~~~~~~N~~~ieells~l~ 117 (184)
T KOG4032|consen 96 NLFHDIQNGNYAIIEELLSKLP 117 (184)
T ss_pred HHHHHHHcccHHHHHHHHHHcc
Confidence 4678888999999999998865
No 138
>PF04840 Vps16_C: Vps16, C-terminal region; InterPro: IPR006925 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=29.92 E-value=1.5e+02 Score=18.89 Aligned_cols=53 Identities=17% Similarity=0.142 Sum_probs=38.6
Q ss_pred HHHHHhCCHHHHHHHHHcCCCchhhh----cCCCCCcHHHHHHHhCChhHHHHHHHH
Q 038143 7 SKFAMTGQWDNIVQAYENNPMSREAK----LTRSGDTALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 7 ~~a~~~g~~~~v~~ll~~~~~~~~~~----~~~~g~t~l~~a~~~~~~~~~~~ll~~ 59 (103)
..|...|+......|+...|...... .-.....+|.-|...|+.+++-.++-+
T Consensus 8 ~~A~~~GR~~LA~~LL~~Ep~~~~qVplLL~m~e~e~AL~kAi~SgD~DLi~~vLl~ 64 (319)
T PF04840_consen 8 RKAYEEGRPKLATKLLELEPRASKQVPLLLKMGEDELALNKAIESGDTDLIYLVLLH 64 (319)
T ss_pred HHHHHcChHHHHHHHHHcCCChHHHHHHHhcCCchHHHHHHHHHcCCccHHHHHHHH
Confidence 46778899999999999877643332 123456678889999999877766554
No 139
>KOG2658 consensus NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Energy production and conversion]
Probab=29.06 E-value=47 Score=21.68 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhh
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAK 32 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~ 32 (103)
..|.-|+..|++...++++.+++...++.
T Consensus 66 ~rlkgA~~rGdw~~tkEil~kg~~wI~~e 94 (478)
T KOG2658|consen 66 WRLKGALARGDWHKTKEILLKGPDWIVNE 94 (478)
T ss_pred hhhhhhhhccchHhHHHHHHhCcHHHHHH
Confidence 35778999999999999999977644443
No 140
>PF05396 Phage_T7_Capsid: Phage T7 capsid assembly protein; InterPro: IPR008768 This family contains the capsid assembly protein (scaffolding protein) of bacteriophage T7.; GO: 0019069 viral capsid assembly
Probab=27.79 E-value=73 Score=17.29 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=16.9
Q ss_pred CCCcHHHHHHHhCChhHHHHHHHH
Q 038143 36 SGDTALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~ 59 (103)
...-.|.-|...+++..++.+++.
T Consensus 62 ~~~ea~~~Ai~~~dla~vk~~vn~ 85 (123)
T PF05396_consen 62 AAAEAFNEAIESGDLATVKAAVNL 85 (123)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 334456777778888888877765
No 141
>PF09722 DUF2384: Protein of unknown function (DUF2384); InterPro: IPR024467 This domain is found predominantly in proteobacterial proteins. Its function in unknown.
Probab=24.57 E-value=80 Score=13.85 Aligned_cols=10 Identities=30% Similarity=0.424 Sum_probs=5.2
Q ss_pred CCCcHHHHHH
Q 038143 74 RGDTAFHLAA 83 (103)
Q Consensus 74 ~g~tpl~~a~ 83 (103)
.|.||+.+..
T Consensus 26 ~g~~Plel~~ 35 (54)
T PF09722_consen 26 GGRTPLELLR 35 (54)
T ss_pred CCCCHHHHHc
Confidence 4555555544
No 142
>smart00668 CTLH C-terminal to LisH motif. Alpha-helical motif of unknown function.
Probab=22.96 E-value=85 Score=13.61 Aligned_cols=24 Identities=17% Similarity=0.454 Sum_probs=19.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcC
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENN 25 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~ 25 (103)
++..+..++..|+++.+...+...
T Consensus 4 ~~~~i~~~i~~g~~~~a~~~~~~~ 27 (58)
T smart00668 4 ERKRIRELILKGDWDEALEWLSSL 27 (58)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHc
Confidence 355677888999999988888773
No 143
>PF12921 ATP13: Mitochondrial ATPase expression; InterPro: IPR024319 ATPase expression protein 2 (also known as ATP13 in some species) is necessary for the expression of subunit 9 of mitochondrial ATPase. The protein has a basic amino terminal signal sequence that is cleaved upon import into mitochondria [].
Probab=21.23 E-value=1.5e+02 Score=15.92 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=20.6
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhh
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREA 31 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~ 31 (103)
+-+...++.|+.+.++.++...-+.+.+
T Consensus 7 ~ii~al~r~g~~~~i~~~i~~~WgI~~~ 34 (126)
T PF12921_consen 7 NIIYALGRSGQLDSIKSYIKSVWGIDVN 34 (126)
T ss_pred HHHHHHhhcCCHHHHHHHHHHhcCCCCC
Confidence 4455667889999999999886554433
No 144
>COG1554 ATH1 Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]
Probab=20.96 E-value=2.2e+02 Score=20.94 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=29.1
Q ss_pred HHHhCChhHHHHHHHHhCcccccccccccCCCCc--HHHHHHHhCCHHHH
Q 038143 44 AAAAGQTNIVSELVEIMGENASNVLKIQNDRGDT--AFHLAAALGNEAMC 91 (103)
Q Consensus 44 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~t--pl~~a~~~~~~~~~ 91 (103)
|+.-|..+..-.+.... +.++..|..++| .+|.|++.|.+..+
T Consensus 647 a~~lg~~~~Aye~~~~~-----a~iDL~n~~~~t~dGiHiasm~g~W~ai 691 (772)
T COG1554 647 AAELGKRDKAYEYFRRA-----ARIDLDDVNGSTDDGIHIASMGGIWLAI 691 (772)
T ss_pred HhhhCcHHHHHHHHHHH-----HhccccccCCCccchHhHHHHHHhHHHH
Confidence 56677666555555554 666676666665 69999998877654
Done!