Query 038143
Match_columns 103
No_of_seqs 134 out of 1454
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 13:31:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.4E-27 1.5E-31 118.4 10.5 92 2-100 2-93 (93)
2 4gpm_A Engineered protein OR26 99.9 3.2E-27 1.1E-31 130.5 10.2 92 3-101 71-162 (169)
3 3aaa_C Myotrophin, protein V-1 99.9 3.5E-25 1.2E-29 116.4 10.7 93 2-101 7-99 (123)
4 4gpm_A Engineered protein OR26 99.9 4.3E-25 1.5E-29 122.0 10.6 91 4-101 39-129 (169)
5 2jab_A H10-2-G3; HER2, darpin, 99.9 2.4E-24 8.3E-29 114.9 11.1 92 3-101 15-106 (136)
6 3c5r_A BARD-1, BRCA1-associate 99.9 2.6E-24 8.8E-29 114.9 9.9 93 2-101 10-102 (137)
7 2l6b_A NR1C; ankyrin, consensu 99.9 1E-24 3.6E-29 113.4 6.2 93 2-101 9-101 (115)
8 1ycs_B 53BP2, P53BP2; ankyrin 99.9 8.6E-24 2.9E-28 122.0 10.1 93 2-101 37-129 (239)
9 1d9s_A Cyclin-dependent kinase 99.9 3.3E-24 1.1E-28 114.4 7.8 91 3-101 13-104 (136)
10 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-23 5E-28 114.9 10.6 92 3-101 43-134 (165)
11 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-23 5.7E-28 111.7 10.3 90 2-98 47-136 (136)
12 1awc_B Protein (GA binding pro 99.9 1.3E-23 4.4E-28 114.0 9.8 92 3-101 35-126 (153)
13 2vge_A RELA-associated inhibit 99.9 2.1E-23 7.1E-28 119.9 10.9 92 3-101 22-113 (229)
14 2zgd_A 3 repeat synthetic anky 99.9 3.8E-23 1.3E-27 106.9 10.5 85 3-94 25-109 (110)
15 3f6q_A Integrin-linked protein 99.9 3.1E-23 1.1E-27 115.0 10.6 92 3-101 40-131 (179)
16 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.4E-23 1.1E-27 113.0 10.5 91 3-100 71-162 (162)
17 1d9s_A Cyclin-dependent kinase 99.9 2.6E-24 8.9E-29 114.8 5.8 91 2-100 45-136 (136)
18 3deo_A Signal recognition part 99.9 3.2E-23 1.1E-27 115.4 10.0 91 3-101 45-136 (183)
19 1dcq_A PYK2-associated protein 99.9 2E-23 6.9E-28 123.0 9.7 92 2-100 169-263 (278)
20 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.6E-23 1.9E-27 107.8 10.3 91 3-100 3-93 (126)
21 3v30_A DNA-binding protein rfx 99.9 4E-23 1.4E-27 113.8 9.9 89 4-99 38-126 (172)
22 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.4E-23 2.5E-27 112.6 10.6 90 4-100 49-138 (169)
23 3v31_A Ankyrin repeat family A 99.9 9E-23 3.1E-27 111.9 10.8 91 3-100 37-127 (167)
24 3ehr_A Osteoclast-stimulating 99.9 2.8E-23 9.6E-28 118.5 9.1 92 3-101 74-166 (222)
25 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.1E-23 3.1E-27 107.0 10.3 91 3-100 36-126 (126)
26 2rfm_A Putative ankyrin repeat 99.9 8.8E-23 3E-27 114.2 10.3 91 3-100 69-159 (192)
27 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.9E-22 6.5E-27 111.0 11.1 93 2-101 14-106 (169)
28 4b93_B Ankyrin repeat domain-c 99.9 7.6E-23 2.6E-27 120.0 10.1 91 4-101 121-211 (269)
29 3ui2_A Signal recognition part 99.9 7.5E-23 2.6E-27 118.5 9.4 91 3-101 46-137 (244)
30 3v30_A DNA-binding protein rfx 99.9 8.3E-23 2.8E-27 112.5 9.0 92 3-101 70-161 (172)
31 1oy3_D Transcription factor in 99.9 1.4E-22 4.7E-27 118.6 10.0 92 3-101 159-251 (282)
32 2xai_A ASB-9, ankyrin repeat a 99.9 1.7E-22 5.7E-27 117.8 10.3 93 2-101 3-95 (261)
33 3v31_A Ankyrin repeat family A 99.9 1.4E-22 4.7E-27 111.2 9.0 93 3-102 70-162 (167)
34 1s70_B 130 kDa myosin-binding 99.9 2.6E-22 9E-27 118.4 10.9 92 3-101 41-132 (299)
35 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-22 4.6E-27 110.6 8.5 90 3-100 39-128 (162)
36 1bi7_B P16INK4A, MTS1, multipl 99.9 4.6E-23 1.6E-27 112.2 6.5 91 3-100 13-136 (156)
37 2rfm_A Putative ankyrin repeat 99.9 1.9E-22 6.4E-27 112.9 8.9 93 2-101 35-127 (192)
38 2etb_A Transient receptor pote 99.9 1.9E-22 6.5E-27 117.1 9.1 94 2-100 136-246 (256)
39 3lvq_E ARF-GAP with SH3 domain 99.9 1.7E-22 5.9E-27 126.8 9.4 93 2-101 171-266 (497)
40 1bi7_B P16INK4A, MTS1, multipl 99.9 3.2E-23 1.1E-27 112.8 5.4 73 3-82 78-151 (156)
41 3jxi_A Vanilloid receptor-rela 99.9 2.1E-22 7.2E-27 117.0 9.1 94 2-100 140-250 (260)
42 4hbd_A KN motif and ankyrin re 99.9 2.7E-22 9.1E-27 117.9 9.6 90 2-98 183-273 (276)
43 2rfa_A Transient receptor pote 99.9 9.1E-22 3.1E-26 112.6 10.9 100 1-101 2-101 (232)
44 1yyh_A HN1;, notch 1, ankyrin 99.9 4.3E-22 1.5E-26 115.6 9.2 90 4-100 126-215 (253)
45 1bd8_A P19INK4D CDK4/6 inhibit 99.9 5.3E-22 1.8E-26 107.7 9.0 85 4-96 38-122 (156)
46 1awc_B Protein (GA binding pro 99.9 8.1E-22 2.8E-26 106.9 9.6 86 2-94 67-152 (153)
47 2b0o_E UPLC1; arfgap, structur 99.9 3.7E-22 1.3E-26 118.7 8.9 91 3-100 191-284 (301)
48 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1E-21 3.6E-26 106.6 10.0 92 3-101 3-94 (156)
49 3f6q_A Integrin-linked protein 99.9 9.8E-22 3.4E-26 108.9 10.0 93 3-101 6-98 (179)
50 3d9h_A CDNA FLJ77766, highly s 99.9 8.3E-22 2.9E-26 116.2 10.2 92 3-101 60-151 (285)
51 3jxi_A Vanilloid receptor-rela 99.9 5.7E-22 2E-26 115.2 8.9 92 3-101 94-211 (260)
52 2f8y_A Notch homolog 1, transl 99.9 1.6E-21 5.5E-26 111.0 10.6 89 4-99 94-182 (223)
53 3twr_A Tankyrase-2; ankyrin re 99.9 1.3E-21 4.5E-26 107.1 9.9 93 3-101 9-101 (165)
54 1oy3_D Transcription factor in 99.9 5.8E-22 2E-26 115.9 8.7 94 2-100 9-103 (282)
55 3utm_A Tankyrase-1; tankyrase, 99.9 1.6E-21 5.4E-26 116.9 10.6 91 3-100 59-149 (351)
56 1ikn_D Protein (I-kappa-B-alph 99.9 3.6E-22 1.2E-26 114.7 7.3 93 3-100 79-176 (236)
57 2pnn_A Transient receptor pote 99.9 1.1E-21 3.8E-26 114.8 9.5 93 2-99 148-257 (273)
58 2rfa_A Transient receptor pote 99.9 9.6E-22 3.3E-26 112.6 9.0 92 2-100 121-222 (232)
59 2etb_A Transient receptor pote 99.9 7.9E-22 2.7E-26 114.4 8.8 93 2-101 90-207 (256)
60 3aji_A 26S proteasome non-ATPa 99.9 2.3E-21 8E-26 110.8 10.5 92 3-101 107-198 (231)
61 3kea_A K1L; tropism, ANK repea 99.9 1.1E-21 3.8E-26 115.7 9.1 89 4-99 64-153 (285)
62 3kea_A K1L; tropism, ANK repea 99.9 1.4E-21 4.8E-26 115.3 9.4 91 2-101 31-121 (285)
63 2pnn_A Transient receptor pote 99.9 1E-21 3.5E-26 114.9 8.8 93 2-101 101-219 (273)
64 1k1a_A B-cell lymphoma 3-encod 99.9 3.1E-21 1.1E-25 110.7 10.6 92 3-101 117-209 (241)
65 2f8y_A Notch homolog 1, transl 99.9 3.6E-21 1.2E-25 109.5 10.5 92 2-100 125-216 (223)
66 2vge_A RELA-associated inhibit 99.9 2.3E-22 7.8E-27 115.6 5.5 93 2-101 54-149 (229)
67 1ikn_D Protein (I-kappa-B-alph 99.9 6.7E-21 2.3E-25 109.4 11.5 92 3-101 118-210 (236)
68 4b93_B Ankyrin repeat domain-c 99.9 1.2E-21 4E-26 115.0 8.2 92 3-101 87-178 (269)
69 3hra_A Ankyrin repeat family p 99.9 2.7E-21 9.1E-26 108.6 9.3 88 4-97 108-200 (201)
70 3aji_A 26S proteasome non-ATPa 99.9 4.3E-21 1.5E-25 109.7 10.3 88 5-98 9-96 (231)
71 2dzn_A Probable 26S proteasome 99.9 5E-21 1.7E-25 109.2 10.3 90 4-98 74-163 (228)
72 3ljn_A Hypothetical protein; a 99.9 1.4E-21 4.9E-26 118.2 8.4 92 3-99 174-268 (364)
73 1n11_A Ankyrin; clathrin, BAND 99.9 3.5E-21 1.2E-25 118.7 10.3 91 3-100 15-105 (437)
74 3b7b_A Euchromatic histone-lys 99.9 4.4E-21 1.5E-25 110.0 9.9 92 3-101 112-203 (237)
75 1yyh_A HN1;, notch 1, ankyrin 99.9 4.1E-21 1.4E-25 111.4 9.9 91 2-99 157-247 (253)
76 2fo1_E LIN-12 protein; beta-ba 99.9 2.2E-21 7.6E-26 118.0 9.1 92 3-100 280-371 (373)
77 4hbd_A KN motif and ankyrin re 99.9 7.3E-21 2.5E-25 111.8 10.8 95 2-101 111-243 (276)
78 3ljn_A Hypothetical protein; a 99.9 2.2E-21 7.6E-26 117.4 8.8 97 3-101 139-237 (364)
79 2xai_A ASB-9, ankyrin repeat a 99.9 7.6E-21 2.6E-25 110.8 10.5 91 3-101 102-192 (261)
80 3hra_A Ankyrin repeat family p 99.9 1.1E-20 3.8E-25 106.0 10.7 90 2-97 5-94 (201)
81 1n11_A Ankyrin; clathrin, BAND 99.9 5.4E-21 1.9E-25 117.9 10.2 92 3-101 279-370 (437)
82 3jue_A Arfgap with coiled-coil 99.9 5.8E-21 2E-25 116.2 9.7 88 3-97 236-323 (368)
83 2dzn_A Probable 26S proteasome 99.9 7.4E-21 2.5E-25 108.5 9.6 94 2-101 107-201 (228)
84 3lvq_E ARF-GAP with SH3 domain 99.9 6.7E-21 2.3E-25 119.6 10.2 92 3-101 133-233 (497)
85 4g8k_A 2-5A-dependent ribonucl 99.9 1.4E-20 4.8E-25 112.9 11.2 97 3-101 26-151 (337)
86 3utm_A Tankyrase-1; tankyrase, 99.9 7.3E-21 2.5E-25 114.0 9.9 94 2-101 24-117 (351)
87 1dcq_A PYK2-associated protein 99.9 1.9E-20 6.5E-25 110.3 11.4 94 3-101 131-231 (278)
88 1wdy_A 2-5A-dependent ribonucl 99.9 1.3E-20 4.3E-25 110.1 10.6 89 4-99 7-96 (285)
89 1wdy_A 2-5A-dependent ribonucl 99.9 1.6E-20 5.4E-25 109.7 11.0 92 3-101 40-131 (285)
90 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-20 4.5E-25 112.1 10.6 92 3-101 152-252 (301)
91 3jue_A Arfgap with coiled-coil 99.8 9.5E-21 3.2E-25 115.3 10.0 92 3-101 200-294 (368)
92 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.2E-21 4E-26 113.0 5.7 92 2-100 70-164 (239)
93 3t8k_A Uncharacterized protein 99.8 1.4E-21 4.7E-26 109.3 5.4 92 3-101 39-147 (186)
94 3b7b_A Euchromatic histone-lys 99.8 2.3E-20 8E-25 107.0 10.2 89 3-98 12-100 (237)
95 3d9h_A CDNA FLJ77766, highly s 99.8 2.4E-20 8.3E-25 110.0 10.3 90 3-100 158-247 (285)
96 3deo_A Signal recognition part 99.8 2.2E-20 7.6E-25 103.9 9.2 77 2-85 76-153 (183)
97 3aaa_C Myotrophin, protein V-1 99.8 3E-21 1E-25 101.3 5.3 82 2-90 40-121 (123)
98 1k1a_A B-cell lymphoma 3-encod 99.8 5.6E-20 1.9E-24 105.5 10.7 91 3-98 10-102 (241)
99 3c5r_A BARD-1, BRCA1-associate 99.8 7.4E-22 2.5E-26 105.3 2.6 91 2-99 43-133 (137)
100 3ui2_A Signal recognition part 99.8 1.6E-20 5.4E-25 108.7 8.4 89 2-97 77-182 (244)
101 1s70_B 130 kDa myosin-binding 99.8 4.6E-20 1.6E-24 108.9 10.1 93 2-101 106-258 (299)
102 1sw6_A Regulatory protein SWI6 99.8 7.4E-20 2.5E-24 109.7 10.7 55 3-59 132-189 (327)
103 3ehr_A Osteoclast-stimulating 99.8 5.3E-21 1.8E-25 109.1 4.8 93 2-100 106-198 (222)
104 4g8k_A 2-5A-dependent ribonucl 99.8 5.5E-20 1.9E-24 110.3 9.3 88 3-101 240-327 (337)
105 3eu9_A Huntingtin-interacting 99.8 6.1E-19 2.1E-23 100.9 10.5 90 4-100 44-134 (240)
106 3eu9_A Huntingtin-interacting 99.8 5.3E-19 1.8E-23 101.2 10.0 93 2-101 9-102 (240)
107 2fo1_E LIN-12 protein; beta-ba 99.8 3.8E-20 1.3E-24 112.6 4.9 89 3-98 126-222 (373)
108 3t8k_A Uncharacterized protein 99.8 3.8E-20 1.3E-24 103.5 4.2 90 2-98 75-177 (186)
109 2aja_A Ankyrin repeat family p 99.8 9.2E-20 3.2E-24 111.3 4.6 88 3-98 129-222 (376)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.5E-18 8.4E-23 86.2 7.2 61 36-101 1-61 (93)
111 2aja_A Ankyrin repeat family p 99.7 8.4E-19 2.9E-23 107.1 4.3 93 3-101 93-189 (376)
112 2zgd_A 3 repeat synthetic anky 99.7 7.6E-17 2.6E-21 83.1 6.0 67 30-101 17-83 (110)
113 1sw6_A Regulatory protein SWI6 99.7 1.9E-17 6.4E-22 99.3 3.2 84 7-97 102-189 (327)
114 2l6b_A NR1C; ankyrin, consensu 99.7 9.9E-17 3.4E-21 83.0 5.1 65 32-101 4-68 (115)
115 1gp8_A Protein (scaffolding pr 88.8 0.65 2.2E-05 18.8 2.6 18 5-22 16-33 (40)
116 3zrh_A Ubiquitin thioesterase 79.5 9.7 0.00033 24.3 6.3 53 7-59 27-91 (454)
117 3a7m_A Flagellar protein FLIT; 40.5 24 0.00082 18.2 2.3 55 5-59 20-74 (122)
118 4g26_A Pentatricopeptide repea 24.5 47 0.0016 21.4 2.1 52 7-59 113-165 (501)
119 3h3m_A Flagellar protein FLIT; 20.1 29 0.00099 18.1 0.4 20 5-24 33-52 (126)
No 1
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.95 E-value=4.4e-27 Score=118.44 Aligned_cols=92 Identities=23% Similarity=0.264 Sum_probs=86.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++.+|..|+||||+|+..++.+++++|++.+ ++++.+|..|.||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHH
Confidence 36899999999999999999998 6778889999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
|+..|+.+++++|++.|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999874
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=3.2e-27 Score=130.51 Aligned_cols=92 Identities=22% Similarity=0.239 Sum_probs=80.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~--gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~G~TpL~~A 143 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNTSDSDGRTPLDLA 143 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHC--cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHH
Confidence 5799999999999999999988 6778888999999999999999999999999988 88889999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|+++|+++
T Consensus 144 ~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 144 REHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHTTCHHHHHHHHTC----
T ss_pred HHcCCHHHHHHHHHCCCCc
Confidence 9999999999999998875
No 3
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=3.5e-25 Score=116.39 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=87.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..++||.|+..|+.+.++.+++. +.+++..+..|+||||+|+..++.+++++|++.+ ++++.+|..|.||||+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-----ADINAPDKHHITPLLS 79 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCcCCCCCCCHHHH
Confidence 46899999999999999999998 5678888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 80 A~~~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSKGADK 99 (123)
T ss_dssp HHHHTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998764
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=4.3e-25 Score=121.96 Aligned_cols=91 Identities=22% Similarity=0.270 Sum_probs=63.9
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||.|+..|+.+.++.++.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|+||||+|+
T Consensus 39 t~l~~a~~~~~~~~~~~ll~~--gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-----advn~~d~~G~TpLh~A~ 111 (169)
T 4gpm_A 39 TPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-----ADVNAKDSDGRTPLHHAA 111 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhc--ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCc-----CCCCCCCCCCCCHHHHHH
Confidence 455555555555555555555 4455566667777777777777777777777776 777777778888888888
Q ss_pred HhCCHHHHHHHHhcCccc
Q 038143 84 ALGNEAMCHCMASKDREL 101 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~~l 101 (103)
..|+.+++++|++.|+++
T Consensus 112 ~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 112 ENGHKEVVKLLISKGADV 129 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT
T ss_pred HcCCHHHHHHHHHcCCCc
Confidence 888888888887777654
No 5
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=2.4e-24 Score=114.95 Aligned_cols=92 Identities=24% Similarity=0.223 Sum_probs=81.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..|..|+||||+|+..++.+++++|++.+ ++++.+|..|.||||+|
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMAN--GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-----ADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred cHHHHHHHHhCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcCCCCCCCHHHHH
Confidence 5789999999999999999988 6667788889999999999999999999999988 88888899999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.++++
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADV 106 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCC
Confidence 9999999999999987764
No 6
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2.6e-24 Score=114.89 Aligned_cols=93 Identities=19% Similarity=0.197 Sum_probs=87.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++..+..|+||||+|+..++.+++++|++.+ .+++.+|..|.||||+
T Consensus 10 g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 10 GETLLHIASIKGDIPSVEYLLQN--GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-----ALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCGGGCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CcccCcCCCCCCHHHH
Confidence 36899999999999999999998 6678888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998764
No 7
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.91 E-value=1e-24 Score=113.36 Aligned_cols=93 Identities=22% Similarity=0.312 Sum_probs=87.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..++||.|+..|+.+.++.++.. +.+++..|..|+||||+|+..++.+++++|++.+ ++++.+|..|.||||+
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSK--GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-----ADVNARSKDGNTPEHL 81 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTT--TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-----CCTTCCCTTCCCTTHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCcccCCCCCCHHHH
Confidence 36899999999999999999988 6678888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..++.+++++|++.|+++
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSH
T ss_pred HHHCCCHHHHHHHHHcCCCC
Confidence 99999999999999998864
No 8
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=8.6e-24 Score=121.98 Aligned_cols=93 Identities=25% Similarity=0.326 Sum_probs=87.3
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..++||.|+..|+.+.++.++.. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~tpL~~ 109 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG-----VNVNAADSDGWTPLHC 109 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCCCTTCCCHHHH
T ss_pred hhHHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHH
Confidence 36899999999999999999988 5578888999999999999999999999999998 8999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 110 A~~~~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 110 AASCNNVQVCKFLVESGAAV 129 (239)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCc
Confidence 99999999999999998875
No 9
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=3.3e-24 Score=114.44 Aligned_cols=91 Identities=18% Similarity=0.118 Sum_probs=73.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCC-CCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDR-GDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|+||||+|+. ++.+++++|++.+ ++++.+|.. |.||||+
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-----~~~~~~~~~~g~t~L~~ 84 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEA--GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-----AEPNCADPATLTRPVHD 84 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-----CCSSCCBTTTTBCHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-----CCCCCcCCCCCCCHHHH
Confidence 5788888888888888888887 55677778888888888888 8888888888887 777778877 7888888
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 85 AAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp HHHHTCHHHHHHHHHTCCCC
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 88888888888888877653
No 10
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1.5e-23 Score=114.87 Aligned_cols=92 Identities=18% Similarity=0.149 Sum_probs=81.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|+||||+|+..++.+++++|++.+ .+++.+|..|.||||+|
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 115 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQH--GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG-----AVVNVADLWKFTPLHEA 115 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHhc--CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC-----CCCCCcCCCCCCHHHHH
Confidence 4789999999999999999988 6677888889999999999999999999999988 88888999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 116 ~~~~~~~~v~~Ll~~ga~~ 134 (165)
T 3twr_A 116 AAKGKYEICKLLLQHGADP 134 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCC
Confidence 9999999999999987654
No 11
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=1.7e-23 Score=111.70 Aligned_cols=90 Identities=22% Similarity=0.263 Sum_probs=84.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.|++. +.+++..|..|.||||+|+..++.+++++|++.+ ++++.+|..|.||+|+
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~tpl~~ 119 (136)
T 2jab_A 47 GLTPLYLATAHGHLEIVEVLLKN--GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG-----ADVNAQDKFGKTAFDI 119 (136)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcCcCCCCCCHHHH
Confidence 35899999999999999999998 6678888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcC
Q 038143 82 AAALGNEAMCHCMASKD 98 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~ 98 (103)
|+..|+.+++++|++.|
T Consensus 120 A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 120 SIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHTTCHHHHHHHHHC-
T ss_pred HHHCCCHHHHHHHHHcC
Confidence 99999999999999865
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=1.3e-23 Score=113.97 Aligned_cols=92 Identities=20% Similarity=0.202 Sum_probs=76.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|+||||+|+..++.+++++|++.+ .+++.+|..|.||||+|
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 107 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG-----ADVNAKDMLKMTALHWA 107 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcC-----CCCCCCCCCCCCHHHHH
Confidence 5788888888888888888877 5567777888888888888888888888888887 77888888888888888
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 108 ~~~~~~~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 108 TEHNHQEVVELLIKYGADV 126 (153)
T ss_dssp HHTTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCc
Confidence 8888888888888887654
No 13
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=2.1e-23 Score=119.94 Aligned_cols=92 Identities=24% Similarity=0.328 Sum_probs=86.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++||.|+..|+.+.++.+++. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-----a~~n~~d~~g~tpLh~A 94 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAG-----ANVNSPDSHGWTPLHCA 94 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred hHHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHH
Confidence 5789999999999999999998 6678889999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 95 ~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 95 ASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp HHTTCHHHHHHHHTTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCc
Confidence 9999999999999998765
No 14
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.91 E-value=3.8e-23 Score=106.88 Aligned_cols=85 Identities=29% Similarity=0.345 Sum_probs=80.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++||.|+..|+.+.++.++.. +.+++..|..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 25 ~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 25 GKKLLEAARAGQDDEVRILMAN--GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-----ADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccccCCCcHHHHH
Confidence 5899999999999999999998 6678888999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHH
Q 038143 83 AALGNEAMCHCM 94 (103)
Q Consensus 83 ~~~~~~~~~~~l 94 (103)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999999999987
No 15
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=3.1e-23 Score=114.97 Aligned_cols=92 Identities=21% Similarity=0.304 Sum_probs=75.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||||+|
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~d~~g~t~L~~A 112 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMR--GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK-----ADINAVNEHGNVPLHYA 112 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHH
Confidence 4688888888888888888887 5667777888888888888888888888888887 77888888888888888
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 113 ~~~~~~~~v~~Ll~~ga~~ 131 (179)
T 3f6q_A 113 CFWGQDQVAEDLVANGALV 131 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCS
T ss_pred HHcCCHHHHHHHHHCCCCc
Confidence 8888888888888887654
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.90 E-value=3.4e-23 Score=113.03 Aligned_cols=91 Identities=24% Similarity=0.306 Sum_probs=72.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccc-cccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNV-LKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++ ++.++..|.||+|+
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~~g~t~l~~ 143 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEF--QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT-----ASNVGHRNHKGDTACDL 143 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS-----CCCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcc-----CCCCCCcCCCCCcHHHH
Confidence 4688888888888888888877 5667777888888888888888888888888887 54 47778888888888
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
|+..|+.+++++|+++|++
T Consensus 144 A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 144 ARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHTTCHHHHHHHHHTC--
T ss_pred HHHcCCHHHHHHHHHhCCC
Confidence 8888888888888888764
No 17
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=2.6e-24 Score=114.83 Aligned_cols=91 Identities=13% Similarity=0.088 Sum_probs=85.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCC-CCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRS-GDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
..+|||.|+. |+.+.++.|++. +.+++..+.. |+||||+|+..++.+++++|++.+ ++++.+|..|.||||
T Consensus 45 g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 45 GRRPIQVMMM-GSAQVAELLLLH--GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG-----ARLDVCDAWGRLPVD 116 (136)
T ss_dssp CCTTTTTSTT-SCHHHHHHHHHH--TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC-----CCCCCCSSSSSCHHH
T ss_pred CCCHHHHHHc-CCHHHHHHHHHC--CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHH
Confidence 3589999999 999999999998 6678888999 999999999999999999999998 889999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCcc
Q 038143 81 LAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~ 100 (103)
+|+..++.+++++|+++|++
T Consensus 117 ~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 117 LAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999998874
No 18
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=3.2e-23 Score=115.43 Aligned_cols=91 Identities=21% Similarity=0.179 Sum_probs=84.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccccc-CCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN-DRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.++. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.++ ..|.||||+
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-----ADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCSSSSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcCCCCCCCCHHHH
Confidence 589999999999999999998 4567888999999999999999999999999998 8888888 899999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCT
T ss_pred HHhcCcHHHHHHHHHcCCCC
Confidence 99999999999999998764
No 19
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=2e-23 Score=122.97 Aligned_cols=92 Identities=18% Similarity=0.187 Sum_probs=86.9
Q ss_pred chHHHHHHHHh---CCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcH
Q 038143 2 EVNCLSKFAMT---GQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTA 78 (103)
Q Consensus 2 ~~~~l~~a~~~---g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tp 78 (103)
..+|||.|+.. |+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~--ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tp 241 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQN--SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK-----ASIEIANESGETP 241 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHH--CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCH
T ss_pred CCCcchHHHHhcccchHHHHHHHHHC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCccCCCCCH
Confidence 36899999999 899999999999 7778899999999999999999999999999998 9999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCcc
Q 038143 79 FHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~ 100 (103)
||+|+..|+.+++++|++.++.
T Consensus 242 L~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 242 LDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999998764
No 20
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=5.6e-23 Score=107.81 Aligned_cols=91 Identities=23% Similarity=0.289 Sum_probs=50.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ .+++.++..|.||||+|
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred ccHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-----CCCcccCCCCCcHHHHH
Confidence 3555666666666666555555 3344445555555555555555555555555555 44555555555555555
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.+++
T Consensus 76 ~~~~~~~~~~~Ll~~g~~ 93 (126)
T 1n0r_A 76 ARNGHLEVVKLLLEAGAD 93 (126)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcChHHHHHHHHHcCCC
Confidence 555555555555555443
No 21
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=4e-23 Score=113.79 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=44.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ .+++.+|..|.||||+|+
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~ 110 (172)
T 3v30_A 38 TPLIWASAFGEIETVRFLLEW--GADPHILAKERESALSLASTGGYTDIVGLLLERD-----VDINIYDWNGGTPLLYAV 110 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc--CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHH
Confidence 445555555555555555544 3334444444455555555555555555554444 444455555555555555
Q ss_pred HhCCHHHHHHHHhcCc
Q 038143 84 ALGNEAMCHCMASKDR 99 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~ 99 (103)
..|+.+++++|++.|+
T Consensus 111 ~~~~~~~v~~Ll~~ga 126 (172)
T 3v30_A 111 RGNHVKCVEALLARGA 126 (172)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 5555555555555444
No 22
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=7.4e-23 Score=112.61 Aligned_cols=90 Identities=22% Similarity=0.292 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||||+|+
T Consensus 49 t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~ 121 (169)
T 2y1l_E 49 TPLHLAAFNGHLEIVEVLLKN--GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG-----ADVNANDMEGHTPLHLAA 121 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHH
Confidence 445555555555555555544 3334444445555555555555555555555544 445555555555555555
Q ss_pred HhCCHHHHHHHHhcCcc
Q 038143 84 ALGNEAMCHCMASKDRE 100 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~~ 100 (103)
..|+.+++++|++.+++
T Consensus 122 ~~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 122 MFGHLEIVEVLLKNGAD 138 (169)
T ss_dssp HTTCHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHcCCC
Confidence 55555555555555443
No 23
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=9e-23 Score=111.92 Aligned_cols=91 Identities=19% Similarity=0.143 Sum_probs=58.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ .+++.+|..|.||||+|
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 109 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQN--GADPQLLGKGRESALSLACSKGYTDIVKMLLDCG-----VDVNEYDWNGGTPLLYA 109 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCC-----CCCCcCCCCCCCHHHHH
Confidence 3566666666666666666666 4445555666666666666666666666666665 55666666666666666
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.|++
T Consensus 110 ~~~~~~~~v~~Ll~~g~~ 127 (167)
T 3v31_A 110 VHGNHVKCVKMLLESGAD 127 (167)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 666666666666666554
No 24
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=2.8e-23 Score=118.51 Aligned_cols=92 Identities=29% Similarity=0.299 Sum_probs=86.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHH-hCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEI-MGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.++.. +.+++..|..|+||||+|+..|+.+++++|++. + ++++.+|..|.||||+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDN--RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPN-----IELNQQNKLGDTALHA 146 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTT-----CCCCCCCTTSCCHHHH
T ss_pred ccccccccccCcHHHHHHHHhC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCC-----CCccccCCCCCCHHHH
Confidence 4799999999999999999998 667888899999999999999999999999998 7 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCS
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998764
No 25
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=9.1e-23 Score=106.99 Aligned_cols=91 Identities=23% Similarity=0.269 Sum_probs=85.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.++.. +.+++..+..|.||||+|+..++.+++++|++.+ .+++.+|..|.||+++|
T Consensus 36 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~l~~A 108 (126)
T 1n0r_A 36 RTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLA 108 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CcHHHHHHHcCcHHHHHHHHHc--CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcC-----CCCcccCCCCCCHHHHH
Confidence 5799999999999999999998 6678888999999999999999999999999998 88899999999999999
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|+++|++
T Consensus 109 ~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 109 ARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHTTCHHHHHHHHHHTCC
T ss_pred HHcCcHHHHHHHHHcCCC
Confidence 999999999999999874
No 26
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=8.8e-23 Score=114.18 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=63.0
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.++.. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||||+|
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 141 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSK--GSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG-----ANVNDRNLEGETPLIVA 141 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCTTCCCHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHH
Confidence 4567777777777777777766 4455666666777777777777777777777766 66666777777777777
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.|++
T Consensus 142 ~~~~~~~~v~~Ll~~ga~ 159 (192)
T 2rfm_A 142 SKYGRSEIVKKLLELGAD 159 (192)
T ss_dssp HHHTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHCCCC
Confidence 777777777777776654
No 27
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.89 E-value=1.9e-22 Score=110.97 Aligned_cols=93 Identities=24% Similarity=0.227 Sum_probs=86.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..++|+.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~ 86 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG-----ADVNAVDHAGMTPLRL 86 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred ccchHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHH
Confidence 35799999999999999999999 6678888999999999999999999999999998 8889999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 87 A~~~~~~~~~~~Ll~~g~~~ 106 (169)
T 2y1l_E 87 AALFGHLEIVEVLLKNGADV 106 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999998764
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=7.6e-23 Score=120.00 Aligned_cols=91 Identities=19% Similarity=0.240 Sum_probs=75.9
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|++.|+..++.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++.++..|.||||+|+
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~--g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g-----advn~~~~~g~t~Lh~A~ 193 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDS--NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHG-----ASINASNNKGNTALHEAV 193 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTT-----CCTTCBCTTSCBHHHHHH
T ss_pred CccccccccChHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCccccCCCcHHHHHH
Confidence 456666666666666666665 4566777889999999999999999999999988 889999999999999999
Q ss_pred HhCCHHHHHHHHhcCccc
Q 038143 84 ALGNEAMCHCMASKDREL 101 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~~l 101 (103)
..|+.+++++|++.|+++
T Consensus 194 ~~g~~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 194 IEKHVFVVELLLLHGASV 211 (269)
T ss_dssp HTTCHHHHHHHHHTTCCS
T ss_pred HcCCHHHHHHHHHCCCCC
Confidence 999999999999998764
No 29
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=7.5e-23 Score=118.47 Aligned_cols=91 Identities=21% Similarity=0.179 Sum_probs=84.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccccc-CCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN-DRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.++. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.++ ..|.||||+
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-----ADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCSSSCCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCcCCCCCCCCHHHH
Confidence 589999999999999999998 3568888999999999999999999999999998 8888888 889999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999998764
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.89 E-value=8.3e-23 Score=112.53 Aligned_cols=92 Identities=23% Similarity=0.181 Sum_probs=86.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.++++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||+|+|
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~A 142 (172)
T 3v30_A 70 ESALSLASTGGYTDIVGLLLER--DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG-----ADLTTEADSGYTPMDLA 142 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHHH
Confidence 5899999999999999999988 6778888999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|+++++++
T Consensus 143 ~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 143 VALGYRKVQQVIENHILKL 161 (172)
T ss_dssp HHHTCHHHHHHHHHHHHHH
T ss_pred HHhCcHHHHHHHHHHHHHH
Confidence 9999999999999987764
No 31
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=1.4e-22 Score=118.58 Aligned_cols=92 Identities=14% Similarity=0.066 Sum_probs=85.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCC-CCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTR-SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.|++. +.+++..+. .|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~g~tpL~~ 231 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDA--GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-----ADPTARMYGGRTPLGS 231 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred cCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCcccccCCCCHHHH
Confidence 5899999999999999999998 666777775 4999999999999999999999998 8999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|+++|+++
T Consensus 232 A~~~~~~~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 232 ALLRPNPILARLLRAHGAPE 251 (282)
T ss_dssp HHTSSCHHHHHHHHHTTCCC
T ss_pred HHHcCCcHHHHHHHHcCCCc
Confidence 99999999999999999875
No 32
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.89 E-value=1.7e-22 Score=117.79 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=83.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~ 75 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHG-----AQVNGVTADWHTPLFN 75 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHH
Confidence 35899999999999999999998 6678888999999999999999999999999988 8888899999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~ 95 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASV 95 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCS
T ss_pred HHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999987764
No 33
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=1.4e-22 Score=111.19 Aligned_cols=93 Identities=23% Similarity=0.207 Sum_probs=87.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||+++|
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A 142 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDC--GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG-----ADPTIETDSGYNSMDLA 142 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHC--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHH
Confidence 5899999999999999999999 6678888999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCcccc
Q 038143 83 AALGNEAMCHCMASKDRELI 102 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l~ 102 (103)
+..|+.+++++|++++++++
T Consensus 143 ~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 143 VALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHTCHHHHHHHHHHHHHHC
T ss_pred HHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999877654
No 34
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.89 E-value=2.6e-22 Score=118.44 Aligned_cols=92 Identities=20% Similarity=0.207 Sum_probs=86.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++|+.|+..|+.+.++.++.. +.+++..+..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENG-----ANINQPDNEGWIPLHAA 113 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHHHH
Confidence 5799999999999999999999 6678888999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~ 132 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHV 132 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHhCCCCC
Confidence 9999999999999998764
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.3e-22 Score=110.64 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=63.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+. |+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ .+++.+|..|.||||+|
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 110 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLR--GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-----ADVNIEDNEGNLPLHLA 110 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred ccHHHHHHc-CcHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHH
Confidence 356666666 666666666666 4455566677777777777777777777777776 66777777777777777
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.+++
T Consensus 111 ~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 111 AKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp HHTTCHHHHHHHHHHSCC
T ss_pred HHcCCHHHHHHHHHccCC
Confidence 777777777777777664
No 36
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=4.6e-23 Score=112.19 Aligned_cols=91 Identities=18% Similarity=0.203 Sum_probs=51.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCC--------------------------------CCCc-HHHHHHHhCC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTR--------------------------------SGDT-ALHIAAAAGQ 49 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~--------------------------------~g~t-~l~~a~~~~~ 49 (103)
.+|||.|+..|+.+.++.+++. +.+++..+. .|+| |||+|+..|+
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~ 90 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC
Confidence 4677777777777777777765 333444444 4555 5555555555
Q ss_pred hhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 50 TNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 50 ~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
.+++++|++.+ ++++.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 91 ~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~ 136 (156)
T 1bi7_B 91 LDTLVVLHRAG-----ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG 136 (156)
T ss_dssp HHHHHHHHHHT-----CCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--
T ss_pred HHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC
Confidence 55555555555 55555555555555555555555555555555543
No 37
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=1.9e-22 Score=112.86 Aligned_cols=93 Identities=18% Similarity=0.184 Sum_probs=86.8
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++..+..|+||||+|+..++.+++++|++.+ .+++.+|..|.||||+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVEN--FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-----SNVNTKDFSGKTPLMW 107 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHH--HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh--ccccccccccCccHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHHH
Confidence 36899999999999999999998 6667888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~ 127 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANV 127 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCS
T ss_pred HHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999998764
No 38
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=1.9e-22 Score=117.06 Aligned_cols=94 Identities=24% Similarity=0.275 Sum_probs=85.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcC-CCchhhhcCCCCCcHHHHHHH--hCChh-------HHHHHHHHhCccccccc---
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENN-PMSREAKLTRSGDTALHIAAA--AGQTN-------IVSELVEIMGENASNVL--- 68 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~ll~~~~~~~~~~~--- 68 (103)
..+|||.|+..|+.+.++.|++.. .+.+++..|..|+||||+|+. .++.+ ++++|++.| +++
T Consensus 136 g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-----a~~~~~ 210 (256)
T 2etb_A 136 GELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-----ARLCPT 210 (256)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHSTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-----CCcccc
Confidence 568999999999999999999921 177888999999999999999 77777 999999999 778
Q ss_pred ----ccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 69 ----KIQNDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 69 ----~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
+.+|..|.||||+|+..|+.+++++|+++++.
T Consensus 211 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 211 VQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 89999999999999999999999999998764
No 39
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.7e-22 Score=126.79 Aligned_cols=93 Identities=18% Similarity=0.135 Sum_probs=86.5
Q ss_pred chHHHHHHHH---hCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcH
Q 038143 2 EVNCLSKFAM---TGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTA 78 (103)
Q Consensus 2 ~~~~l~~a~~---~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tp 78 (103)
..+|||.|+. .|+.+.++.|+.. +++++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||
T Consensus 171 g~t~Lh~A~~~a~~g~~~~v~~Ll~~--ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~tp 243 (497)
T 3lvq_E 171 EELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-----ALVGTVNEAGETA 243 (497)
T ss_dssp CBCHHHHHHHTCCTTTHHHHHHHHHH--SCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTC-----CCCSCCCTTCCCH
T ss_pred cchHHHHHHHhcccccHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCH
Confidence 3689999976 8999999999999 7789999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCccc
Q 038143 79 FHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~l 101 (103)
||+|+..|+.+++++|++.|++.
T Consensus 244 l~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 244 LDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHTCC--
T ss_pred HHHHHHcCCHHHHHHHHHhCCCC
Confidence 99999999999999999998864
No 40
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.88 E-value=3.2e-23 Score=112.81 Aligned_cols=73 Identities=15% Similarity=0.059 Sum_probs=52.6
Q ss_pred hH-HHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 3 VN-CLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~-~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.+ |||.|+..|+.+.++.|++. +.+++..+..|.||||+|+..++.+++++|++.| ++++.++..|.||.+-
T Consensus 78 ~ttpL~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTLVVLHRA--GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA-----GGTRGSNHARIDAAEG 150 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred CcHHHHHHHHCCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC-----CCCCccCcCcCccccc
Confidence 35 99999999999999999999 6778889999999999999999999999999998 8999999999999764
Q ss_pred H
Q 038143 82 A 82 (103)
Q Consensus 82 a 82 (103)
+
T Consensus 151 ~ 151 (156)
T 1bi7_B 151 P 151 (156)
T ss_dssp -
T ss_pred C
Confidence 3
No 41
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.88 E-value=2.1e-22 Score=117.02 Aligned_cols=94 Identities=21% Similarity=0.176 Sum_probs=84.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcC-CCchhhhcCCCCCcHHHHHHHhCC---------hhHHHHHHHHhCccccccc---
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENN-PMSREAKLTRSGDTALHIAAAAGQ---------TNIVSELVEIMGENASNVL--- 68 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~ll~~~~~~~~~~~--- 68 (103)
..+|||.|+..|+.++++.|++.. .+.+++..|..|+||||+|+..++ .+++++|++.| +++
T Consensus 140 g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~~~~ 214 (260)
T 3jxi_A 140 GELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-----AKLFPD 214 (260)
T ss_dssp CSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-----HHHCTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-----cccccc
Confidence 358999999999999999999932 277888999999999999999888 68999999998 766
Q ss_pred ----ccccCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 69 ----KIQNDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 69 ----~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
+.+|..|.||||+|+..|+.+++++|+++++.
T Consensus 215 ~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 215 TNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 77999999999999999999999999998764
No 42
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=2.7e-22 Score=117.94 Aligned_cols=90 Identities=19% Similarity=0.193 Sum_probs=83.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHH-HhCcccccccccccCCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVE-IMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~-~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
..+|||.|+..|+.+.++.|++. +.+++..|..|+||||+|+..|+.+++++|++ .+ ++++.+|..|.||||
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~--gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~g~TpL~ 255 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLAC--EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS-----CDISLTDRDGSTALM 255 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT-----CCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC-----CCCcCcCCCCCCHHH
Confidence 35899999999999999999998 77788899999999999999999999999998 67 889999999999999
Q ss_pred HHHHhCCHHHHHHHHhcC
Q 038143 81 LAAALGNEAMCHCMASKD 98 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~ 98 (103)
+|+..|+.+++++|+++.
T Consensus 256 ~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 256 VALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHTCHHHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhcc
Confidence 999999999999999874
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.88 E-value=9.1e-22 Score=112.64 Aligned_cols=100 Identities=19% Similarity=0.146 Sum_probs=85.8
Q ss_pred CchHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 1 MEVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 1 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
+..+|||.|+..|+.+.++.++... +.+++..|..|+||||+|+..|+.+++++|++.+.+......+.+|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 3578999999999999999999873 466888899999999999999999999999999822211222667889999999
Q ss_pred HHHHhCCHHHHHHHHhcCccc
Q 038143 81 LAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|+..|+.+++++|++.++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~ 101 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASV 101 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCHHHHHHHHhCCCCC
Confidence 999999999999999998764
No 44
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.88 E-value=4.3e-22 Score=115.56 Aligned_cols=90 Identities=20% Similarity=0.149 Sum_probs=48.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||.|+..|+.+.++.|+.. +.+++..+..|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpL~~A~ 198 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-----ANKDMQNNREETPLFLAA 198 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHH
T ss_pred cHHHHHHHcChHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHH
Confidence 445555555555555555544 3344444555555555555555555555555555 555555555555555555
Q ss_pred HhCCHHHHHHHHhcCcc
Q 038143 84 ALGNEAMCHCMASKDRE 100 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~~ 100 (103)
..|+.+++++|++.|++
T Consensus 199 ~~~~~~~v~~Ll~~ga~ 215 (253)
T 1yyh_A 199 REGSYETAKVLLDHFAN 215 (253)
T ss_dssp HHTCHHHHHHHHHTTCC
T ss_pred HCCCHHHHHHHHHcCCC
Confidence 55555555555555543
No 45
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=5.3e-22 Score=107.73 Aligned_cols=85 Identities=22% Similarity=0.268 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||. +..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+
T Consensus 38 t~L~~-~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~ 109 (156)
T 1bd8_A 38 TALQV-MMFGSTAIALELLKQ--GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG-----ADVNVPDGTGALPIHLAV 109 (156)
T ss_dssp CHHHH-SCTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHH
T ss_pred cHHHH-HHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCcHHHHHH
Confidence 34444 444444444444443 3333344444444444444444444444444444 444444444444444444
Q ss_pred HhCCHHHHHHHHh
Q 038143 84 ALGNEAMCHCMAS 96 (103)
Q Consensus 84 ~~~~~~~~~~l~~ 96 (103)
..|+.+++++|++
T Consensus 110 ~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 110 QEGHTAVVSFLAA 122 (156)
T ss_dssp HHTCHHHHHHHHT
T ss_pred HhChHHHHHHHHh
Confidence 4444444444443
No 46
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.88 E-value=8.1e-22 Score=106.86 Aligned_cols=86 Identities=20% Similarity=0.170 Sum_probs=81.1
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||+|+
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~ 139 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKH--GADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQSKFCKTAFDI 139 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHHH
Confidence 35799999999999999999988 6778889999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHH
Q 038143 82 AAALGNEAMCHCM 94 (103)
Q Consensus 82 a~~~~~~~~~~~l 94 (103)
|+..|+.+++++|
T Consensus 140 A~~~~~~~i~~~L 152 (153)
T 1awc_B 140 SIDNGNEDLAEIL 152 (153)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999999987
No 47
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=3.7e-22 Score=118.73 Aligned_cols=91 Identities=18% Similarity=0.130 Sum_probs=85.4
Q ss_pred hHHHHHHHHh---CCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHH
Q 038143 3 VNCLSKFAMT---GQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAF 79 (103)
Q Consensus 3 ~~~l~~a~~~---g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl 79 (103)
.+|||+|+.. |+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|.|||
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~--gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~G~TpL 263 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQN--GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-----ALVGTVNEAGETAL 263 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHH--SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCCSCCCTTSCCHH
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHH
Confidence 5799999997 899999999999 6778889999999999999999999999999998 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCcc
Q 038143 80 HLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 80 ~~a~~~~~~~~~~~l~~~~~~ 100 (103)
|+|+..|+.+++++|++.+++
T Consensus 264 ~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 264 DIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhcCC
Confidence 999999999999999988654
No 48
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=1e-21 Score=106.56 Aligned_cols=92 Identities=23% Similarity=0.272 Sum_probs=85.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++|+.|+..|+.+.++.++.. .+.+.+..+..|.||||+ +..|+.+++++|++.+ .+++.+|..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG-----ASPNVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC-----CCCCCcCCCCCCHHHHH
Confidence 5799999999999999999998 455688889999999999 9999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~ 94 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADV 94 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCS
T ss_pred HHcCcHHHHHHHHHcCCCC
Confidence 9999999999999998764
No 49
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=9.8e-22 Score=108.93 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=85.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++||.|+..|+.+.++.++...+ .+++..+..|+||||+|+..|+.+++++|++.+ .+++.++..|.||||+|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTE-NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-----ARINVMNRGDDTPLHLA 79 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTT-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCc-ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCCcCCCCCCHHHHH
Confidence 468999999999999999999853 457788999999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.++++
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~ 98 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADI 98 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCC
Confidence 9999999999999998764
No 50
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=8.3e-22 Score=116.21 Aligned_cols=92 Identities=13% Similarity=0.046 Sum_probs=82.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|+.. +.+++..+..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHG-----AQVNGVTADWHTPLFNA 132 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCSSCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-----CCCCCCCCCCCCHHHHH
Confidence 5899999999999999999998 6667888999999999999999999999999988 88888999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.++++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~ 151 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASV 151 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCS
T ss_pred HHcCHHHHHHHHHHCCCCC
Confidence 9999999999999987654
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=5.7e-22 Score=115.18 Aligned_cols=92 Identities=23% Similarity=0.202 Sum_probs=84.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcC--------------CCCCcHHHHHHHhCChhHHHHHHH---HhCcccc
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLT--------------RSGDTALHIAAAAGQTNIVSELVE---IMGENAS 65 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~ 65 (103)
.+|||.|+..|+.++++.|++. +.+++..+ ..|+||||+|+..|+.+++++|++ .+
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g----- 166 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEK--GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ----- 166 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-----
T ss_pred CCHHHHHHHcCCHHHHHHHHhC--CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-----
Confidence 5899999999999999999998 66677777 589999999999999999999999 77
Q ss_pred cccccccCCCCcHHHHHHHhCC---------HHHHHHHHhcCccc
Q 038143 66 NVLKIQNDRGDTAFHLAAALGN---------EAMCHCMASKDREL 101 (103)
Q Consensus 66 ~~~~~~~~~g~tpl~~a~~~~~---------~~~~~~l~~~~~~l 101 (103)
++++.+|..|.||||+|+..++ .+++++|++.|+++
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 8899999999999999999887 79999999997754
No 52
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.87 E-value=1.6e-21 Score=110.98 Aligned_cols=89 Identities=20% Similarity=0.147 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||||+|+
T Consensus 94 t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 94 TPLILAARLAVEGMLEDLINS--HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-----ANKDMQNNREETPLFLAA 166 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHhCcHHHHHHHHHc--CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCcCHHHHHH
Confidence 344444444444444444444 3334444444444444444444444444444444 444444444445555544
Q ss_pred HhCCHHHHHHHHhcCc
Q 038143 84 ALGNEAMCHCMASKDR 99 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~~ 99 (103)
..|+.+++++|++.++
T Consensus 167 ~~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 167 REGSYETAKVLLDHFA 182 (223)
T ss_dssp HHTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 4444444444444443
No 53
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=1.3e-21 Score=107.06 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=85.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.++|+.|+..|+.+.++.++... +.+.+..+..|+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-----ADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred hHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-----CCCCccCCCCCCHHHHH
Confidence 57999999999999999999864 3556677888999999999999999999999998 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.++++
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~ 101 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVV 101 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCT
T ss_pred HHcCcHHHHHHHHhCCCCC
Confidence 9999999999999998764
No 54
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.87 E-value=5.8e-22 Score=115.94 Aligned_cols=94 Identities=18% Similarity=0.129 Sum_probs=85.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCc-hhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMS-REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
..+|||.|+..|+.+.++.|+..+... .++..+..|+||||+|+..|+.+++++|++.| ++++.++..|.||||
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG-----AGVLVAERGGHTALH 83 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHH
Confidence 368999999999999999999883332 26778999999999999999999999999998 889999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCcc
Q 038143 81 LAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~ 100 (103)
+|+..|+.+++++|++.++.
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~ 103 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPS 103 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCS
T ss_pred HHHHcCCcchhHhhhccCCC
Confidence 99999999999999998764
No 55
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.87 E-value=1.6e-21 Score=116.87 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=67.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|++. +.+++..+..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-----~~~~~~~~~g~t~L~~A 131 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG-----ACVNAMDLWQFTPLHEA 131 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCCCCCHHHHH
Confidence 4677777777777777777776 5556667777777777777777777777777776 66777777777777777
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.|++
T Consensus 132 ~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 132 ASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHcCCC
Confidence 777777777777777654
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.87 E-value=3.6e-22 Score=114.71 Aligned_cols=93 Identities=24% Similarity=0.228 Sum_probs=60.5
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCC----chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccC-CCCc
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPM----SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQND-RGDT 77 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~-~g~t 77 (103)
.+|||.|+..|+.+.++.++..+.. ...+..+..|.||||+|+..|+.+++++|++.+ ++++.++. .|.|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~~g~t 153 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG-----ADVNAQEPCNGRT 153 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCC
Confidence 4667777777777777766666321 123455666677777777777777777777666 66666665 6677
Q ss_pred HHHHHHHhCCHHHHHHHHhcCcc
Q 038143 78 AFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 78 pl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
|||+|+..|+.+++++|++.|++
T Consensus 154 pL~~A~~~~~~~~v~~Ll~~ga~ 176 (236)
T 1ikn_D 154 ALHLAVDLQNPDLVSLLLKCGAD 176 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777777777777777666654
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=1.1e-21 Score=114.75 Aligned_cols=93 Identities=23% Similarity=0.218 Sum_probs=83.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcC-CCchhhhcCCCCCcHHHHHHHhCC---------hhHHHHHHHHhCcccccccc--
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENN-PMSREAKLTRSGDTALHIAAAAGQ---------TNIVSELVEIMGENASNVLK-- 69 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~ll~~~~~~~~~~~~-- 69 (103)
..+|||.|+..|+.++++.|++.. .+.+++..|..|+||||+|+..++ .+++++|++.| ++++
T Consensus 148 g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~n~~ 222 (273)
T 2pnn_A 148 GELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-----AKLHPT 222 (273)
T ss_dssp CBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHCTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-----hhcccc
Confidence 458999999999999999999931 277888999999999999999998 78999999998 6664
Q ss_pred -----cccCCCCcHHHHHHHhCCHHHHHHHHhcCc
Q 038143 70 -----IQNDRGDTAFHLAAALGNEAMCHCMASKDR 99 (103)
Q Consensus 70 -----~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~ 99 (103)
.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 223 ~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 589999999999999999999999999876
No 58
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=9.6e-22 Score=112.56 Aligned_cols=92 Identities=23% Similarity=0.195 Sum_probs=83.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHH----HHHHHHhCccccccc------ccc
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIV----SELVEIMGENASNVL------KIQ 71 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~----~~ll~~~~~~~~~~~------~~~ 71 (103)
..+|||.|+..|+.+.++.|++. +.+++..|..|+||||+|+..++.+++ ++|++.+ ++. +.+
T Consensus 121 g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g-----~~~~~~~~~~~~ 193 (232)
T 2rfa_A 121 GEHPLSFAACVGSEEIVRLLIEH--GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYD-----GGDHLKSLELVP 193 (232)
T ss_dssp CSSHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTT-----CSCSSCCGGGCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcC-----CchhhhhhhccC
Confidence 46899999999999999999998 777888999999999999999999888 8999988 444 588
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhcCcc
Q 038143 72 NDRGDTAFHLAAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 72 ~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 100 (103)
|..|.||||+|+..|+.+++++|+++++.
T Consensus 194 ~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 194 NNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999999999999999999998764
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.87 E-value=7.9e-22 Score=114.43 Aligned_cols=93 Identities=18% Similarity=0.152 Sum_probs=84.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCC-------------CCcHHHHHHHhCChhHHHHHHH---HhCcccc
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRS-------------GDTALHIAAAAGQTNIVSELVE---IMGENAS 65 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~-------------g~t~l~~a~~~~~~~~~~~ll~---~~~~~~~ 65 (103)
..+|||.|+..|+.++++.|++. +.+++..+.. |.||||+|+..|+.+++++|++ .+
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g----- 162 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVEN--GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP----- 162 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-----
Confidence 35899999999999999999999 6667777765 9999999999999999999999 77
Q ss_pred cccccccCCCCcHHHHHHH--hCCHH-------HHHHHHhcCccc
Q 038143 66 NVLKIQNDRGDTAFHLAAA--LGNEA-------MCHCMASKDREL 101 (103)
Q Consensus 66 ~~~~~~~~~g~tpl~~a~~--~~~~~-------~~~~l~~~~~~l 101 (103)
++++.+|..|.||||+|+. .++.+ ++++|++.|+++
T Consensus 163 a~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 163 ASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 8899999999999999999 78888 999999988764
No 60
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.87 E-value=2.3e-21 Score=110.82 Aligned_cols=92 Identities=22% Similarity=0.217 Sum_probs=62.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|
T Consensus 107 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 179 (231)
T 3aji_A 107 CTPLHYAASKNRHEIAVMLLEG--GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK-----ASTNIQDTEGNTPLHLA 179 (231)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-----CCccccCCCCCCHHHHH
Confidence 3566666666666666666665 4445556666667777777777777777777666 66677777777777777
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 180 ~~~~~~~~v~~Ll~~ga~~ 198 (231)
T 3aji_A 180 CDEERVEEAKFLVTQGASI 198 (231)
T ss_dssp HHTTCHHHHHHHHHTTCCS
T ss_pred HHCCCHHHHHHHHHCCCCC
Confidence 7777777777777776653
No 61
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.87 E-value=1.1e-21 Score=115.72 Aligned_cols=89 Identities=19% Similarity=0.134 Sum_probs=43.2
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCC-CcHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRG-DTAFHLA 82 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g-~tpl~~a 82 (103)
+|||.|+..|+.+.++.|++. +.+++..+..|+||||+|+..|+.+++++|++.+ ++++.++..| .||||+|
T Consensus 64 t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 64 FPLHQAATLEDTKIVKILLFS--GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN-----WRLMFYGKTGWKTSFYHA 136 (285)
T ss_dssp CHHHHHTTSSSCHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-----GGGGGCSSSGGGSHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC-----CCCCccCCCCCCCHHHHH
Confidence 344444444444444444444 3334444444555555555555555555555544 4444444444 4555555
Q ss_pred HHhCCHHHHHHHHhcCc
Q 038143 83 AALGNEAMCHCMASKDR 99 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~ 99 (103)
+..|+.+++++|++.++
T Consensus 137 ~~~~~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 137 VMLNDVSIVSYFLSEIP 153 (285)
T ss_dssp HHTTCHHHHHHHHTTSC
T ss_pred HHcCCHHHHHHHHhCCC
Confidence 55555555555554444
No 62
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.87 E-value=1.4e-21 Score=115.30 Aligned_cols=91 Identities=20% Similarity=0.107 Sum_probs=83.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.|++. +.+++.. .|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~t~L~~ 101 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNA--GALKNLL--ENEFPLHQAATLEDTKIVKILLFSG-----LDDSQFDDKGNTALYY 101 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT--TGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhC--CCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCCCCcHHHH
Confidence 35899999999999999999999 6666665 4899999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 102 A~~~g~~~~v~~Ll~~ga~~ 121 (285)
T 3kea_A 102 AVDSGNMQTVKLFVKKNWRL 121 (285)
T ss_dssp HHHTTCHHHHHHHHHHCGGG
T ss_pred HHHcCCHHHHHHHHhcCCCC
Confidence 99999999999999998764
No 63
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=1e-21 Score=114.94 Aligned_cols=93 Identities=17% Similarity=0.167 Sum_probs=84.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCC--------------CCCcHHHHHHHhCChhHHHHHHH---HhCccc
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTR--------------SGDTALHIAAAAGQTNIVSELVE---IMGENA 64 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~--------------~g~t~l~~a~~~~~~~~~~~ll~---~~~~~~ 64 (103)
..+|||.|+..|+.++++.|++. +.+++..+. .|.||||+|+..|+.+++++|++ .+
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g---- 174 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVEN--GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP---- 174 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC----
Confidence 35899999999999999999998 666777776 79999999999999999999999 88
Q ss_pred ccccccccCCCCcHHHHHHHhCC---------HHHHHHHHhcCccc
Q 038143 65 SNVLKIQNDRGDTAFHLAAALGN---------EAMCHCMASKDREL 101 (103)
Q Consensus 65 ~~~~~~~~~~g~tpl~~a~~~~~---------~~~~~~l~~~~~~l 101 (103)
++++.+|..|.||||+|+..|+ .+++++|++.|+++
T Consensus 175 -ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 219 (273)
T 2pnn_A 175 -ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKL 219 (273)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhc
Confidence 8899999999999999999998 79999999987654
No 64
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.87 E-value=3.1e-21 Score=110.74 Aligned_cols=92 Identities=16% Similarity=0.151 Sum_probs=77.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.+++. +.+++..+ ..|.||||+|+..++.+++++|++.+ ++++.+|..|.||||+
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~ 189 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLER--GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-----ANVNAQMYSGSSALHS 189 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCBCTTSCBHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHc--CCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHH
Confidence 4688888888888888888887 55566666 77888888888888888888888887 7888888889999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|+++
T Consensus 190 A~~~~~~~~v~~Ll~~ga~~ 209 (241)
T 1k1a_A 190 ASGRGLLPLVRTLVRSGADS 209 (241)
T ss_dssp HHHHTCHHHHHHHHHTTCCT
T ss_pred HHHcCCHHHHHHHHhcCCCC
Confidence 99999999999999887754
No 65
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.86 E-value=3.6e-21 Score=109.52 Aligned_cols=92 Identities=14% Similarity=0.102 Sum_probs=86.6
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||+++
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~ 197 (223)
T 2f8y_A 125 GKSALHWAAAVNNVDAAVVLLKN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHF-----ANRDITDHMDRLPRDI 197 (223)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-----CCCccccccCCCHHHH
Confidence 35899999999999999999999 6778888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
|+..++.+++++|++.|..
T Consensus 198 A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 198 AQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp HHHTTCHHHHHHHHHTTCS
T ss_pred HHHhcchHHHHHHHHcCCC
Confidence 9999999999999999864
No 66
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.86 E-value=2.3e-22 Score=115.60 Aligned_cols=93 Identities=18% Similarity=0.170 Sum_probs=85.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccccc-CCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN-DRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-~~g~tpl~ 80 (103)
..+|||.|+..|+.++++.|++. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.++ ..|.||||
T Consensus 54 g~tpLh~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~~g~tpL~ 126 (229)
T 2vge_A 54 GITALHNAICGANYSIVDFLITA--GANVNSPDSHGWTPLHCAASCNDTVICMALVQHG-----AAIFATTLSDGATAFE 126 (229)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCTTCCCSSTTCCTGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcccccCCCCCCHHH
Confidence 36899999999999999999998 6778889999999999999999999999999998 8888886 69999999
Q ss_pred HH--HHhCCHHHHHHHHhcCccc
Q 038143 81 LA--AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 81 ~a--~~~~~~~~~~~l~~~~~~l 101 (103)
+| +..|+.+++++|++.|+++
T Consensus 127 ~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 127 KCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp GCCTTSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHhcChHHHHHHHHHcCCCc
Confidence 99 9999999999999987654
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.86 E-value=6.7e-21 Score=109.40 Aligned_cols=92 Identities=16% Similarity=0.147 Sum_probs=71.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCC-CCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTR-SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
.+|||.|+..|+.+.++.|++. +.+++..+. .|.||||+|+..|+.+++++|++.| ++++.+|..|.||+|+
T Consensus 118 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~ 190 (236)
T 1ikn_D 118 HTCLHLASIHGYLGIVELLVSL--GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG-----ADVNRVTYQGYSPYQL 190 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCSCCCCTTCCCGGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcccCCCCCHHHH
Confidence 4678888888888888888877 556666665 7788888888888888888888777 7777778888888888
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.|++.
T Consensus 191 A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 191 TWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp CTTSSCHHHHHHHHTTSCGG
T ss_pred HHccCchHHHHHHHHcchhh
Confidence 88888888888888877653
No 68
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=114.97 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=83.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||+|+..|+.++++.|+.. +.+++..+..|.||+|+|+..++.+++++|++.+ ++++.+|..|.||||+|
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-----~~~n~~d~~g~TpL~~A 159 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKH--GANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-----AKPNKKDLSGNTPLIYA 159 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHhc--CCCcCccCCCCCCccccccccChHHHHHHHHHCC-----CCCCCCCCCCCCHHHHH
Confidence 5799999999999999999988 6667788889999999999999999999999988 88999999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 160 ~~~g~~~~v~~Ll~~gadv 178 (269)
T 4b93_B 160 CSGGHHELVALLLQHGASI 178 (269)
T ss_dssp HHTTCGGGHHHHHHTTCCT
T ss_pred HHCCCHHHHHHHHHCCCCC
Confidence 9999999999999998764
No 69
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.86 E-value=2.7e-21 Score=108.58 Aligned_cols=88 Identities=26% Similarity=0.231 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC-----hhHHHHHHHHhCcccccccccccCCCCcH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ-----TNIVSELVEIMGENASNVLKIQNDRGDTA 78 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~ll~~~~~~~~~~~~~~~~~g~tp 78 (103)
+|||.|+..|+.+.++.+++.++ .+++..+..|.||||+|+..+. .+++++|++.| ++++.+|..|.||
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~ 181 (201)
T 3hra_A 108 NALIPAAEKGHIDNVKLLLEDGR-EDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG-----ADQSIKDNSGRTA 181 (201)
T ss_dssp CSHHHHHHTTCHHHHHHHHHHCC-CCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT-----CCTTCCCTTSCCH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCC-CCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC-----CCCCccCCCCCCH
Confidence 44555555555555555554421 3344445555555555555544 45555555554 4555555555555
Q ss_pred HHHHHHhCCHHHHHHHHhc
Q 038143 79 FHLAAALGNEAMCHCMASK 97 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~ 97 (103)
+|+|+..|+.+++++|++.
T Consensus 182 l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 182 MDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHHcCCHhHHHHHHhc
Confidence 5555555555555555544
No 70
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.86 E-value=4.3e-21 Score=109.70 Aligned_cols=88 Identities=24% Similarity=0.384 Sum_probs=36.5
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHH
Q 038143 5 CLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAA 84 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~ 84 (103)
+||.|+..|+.+.++.++...+. ..+..+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+.
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQLG-----VPVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHHH
T ss_pred hHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC-----CCCCCcCCCCCCHHHHHHH
Confidence 44444444444444444443221 12333444444444444444444444444443 3333344444444444444
Q ss_pred hCCHHHHHHHHhcC
Q 038143 85 LGNEAMCHCMASKD 98 (103)
Q Consensus 85 ~~~~~~~~~l~~~~ 98 (103)
.|+.+++++|++.+
T Consensus 83 ~~~~~~v~~Ll~~g 96 (231)
T 3aji_A 83 AGXDEIVKALLVKG 96 (231)
T ss_dssp HTCHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHcC
Confidence 44444444444433
No 71
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=5e-21 Score=109.19 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=47.8
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAA 83 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 83 (103)
+|||.|+..|+.+.++.++..+.+.+.+..+..|.||||+|+..++.+++++|++.+ .+++.++..|.||||+|+
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG-----ASVRIKDKFNQIPLHRAA 148 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcC-----CCccccCCCCCCHHHHHH
Confidence 455555555555555555554322344444555555555555555555555555554 445555555555555555
Q ss_pred HhCCHHHHHHHHhcC
Q 038143 84 ALGNEAMCHCMASKD 98 (103)
Q Consensus 84 ~~~~~~~~~~l~~~~ 98 (103)
..|+.+++++|++.+
T Consensus 149 ~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 149 SVGSLKLIELLCGLG 163 (228)
T ss_dssp HTTCHHHHHHHHTTT
T ss_pred HcCCHHHHHHHHhcC
Confidence 555555555555544
No 72
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=1.4e-21 Score=118.18 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=53.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCC---chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPM---SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAF 79 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl 79 (103)
.+|||.|+..|+.+.++.|+..+.. ..++..+..|+||||+|+..|+.+++++|++.| ++++.+|..|.|||
T Consensus 174 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~g~tpL 248 (364)
T 3ljn_A 174 ETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG-----IDVNMEDNEHTVPL 248 (364)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-----CCTTCCCTTSCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHH
Confidence 3556666666666666666655211 114455556666666666666666666666655 55666666666666
Q ss_pred HHHHHhCCHHHHHHHHhcCc
Q 038143 80 HLAAALGNEAMCHCMASKDR 99 (103)
Q Consensus 80 ~~a~~~~~~~~~~~l~~~~~ 99 (103)
|+|+..|+.+++++|+++++
T Consensus 249 ~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 249 YLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp HHHHHTCCHHHHHHHHHHSC
T ss_pred HHHHHhChHHHHHHHHHcCC
Confidence 66666666666666666543
No 73
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.86 E-value=3.5e-21 Score=118.73 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=75.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.|+.|++. +.+++..+..|.||||+|+..|+.+++++|++.+ ++++.++..|.||||+|
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 87 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQR--GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNK-----AKVNAKAKDDQTPLHCA 87 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT--TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHT-----CCSSCCCTTSCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-----CCCCCCCCCCCCHHHHH
Confidence 5788888888888888888887 5566777888888888888888888888888887 77778888888888888
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|+++|++
T Consensus 88 ~~~g~~~~v~~Ll~~ga~ 105 (437)
T 1n11_A 88 ARIGHTNMVKLLLENNAN 105 (437)
T ss_dssp HHHTCHHHHHHHHHHTCC
T ss_pred HHCCCHHHHHHHHhCCCC
Confidence 888888888888887764
No 74
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.86 E-value=4.4e-21 Score=110.02 Aligned_cols=92 Identities=20% Similarity=0.121 Sum_probs=63.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|
T Consensus 112 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A 184 (237)
T 3b7b_A 112 WTPMIWATEYKHVDLVKLLLSK--GSDINIRDNEENICLHWAAFSGCVDIAEILLAAK-----CDLHAVNIHGDSPLHIA 184 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT-----CCTTCCCTTCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHH
Confidence 3566667766776666666666 4455566666777777777777777777777666 66667777777777777
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 185 ~~~~~~~~v~~Ll~~gad~ 203 (237)
T 3b7b_A 185 ARENRYDCVVLFLSRDSDV 203 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCT
T ss_pred HHhCCHhHHHHHHHcCCCC
Confidence 7777777777777776653
No 75
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.86 E-value=4.1e-21 Score=111.42 Aligned_cols=91 Identities=14% Similarity=0.117 Sum_probs=83.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.|++. +.+++..+..|.||||+|+..|+.+++++|++.| ++++.+|..|.||+++
T Consensus 157 g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~~ 229 (253)
T 1yyh_A 157 GKSALHWAAAVNNVDAAVVLLKN--GANKDMQNNREETPLFLAAREGSYETAKVLLDHF-----ANRDITDHMDRLPRDI 229 (253)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-----CCccccccCCCCHHHH
Confidence 36899999999999999999999 6778889999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCc
Q 038143 82 AAALGNEAMCHCMASKDR 99 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~ 99 (103)
|+..|+.+++++|....+
T Consensus 230 A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 230 AQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp HHHTTCHHHHHHHHC---
T ss_pred HHHcCCHHHHHHHHHHhh
Confidence 999999999999988754
No 76
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.86 E-value=2.2e-21 Score=118.02 Aligned_cols=92 Identities=18% Similarity=0.163 Sum_probs=85.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|+... +.+++..|..|.||||+|+..|+.+++++|++.| ++++.+|..|.|||++|
T Consensus 280 ~t~Lh~A~~~g~~~~v~~Ll~~~-~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----ad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 280 RTALHYAAQVSNMPIVKYLVGEK-GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVEAVDATDHTARQLA 353 (373)
T ss_dssp CCTHHHHHSSCCHHHHHHHHHHS-CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCSSSCCHHHHH
T ss_pred CCHHHHHHHhCCHHHHHHHHHhc-CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccCCCCCCCCHHHHH
Confidence 57999999999999999999883 2678889999999999999999999999999998 89999999999999999
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.+++
T Consensus 354 ~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 354 QANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHTTCHHHHHHHHTTC--
T ss_pred HHcCCHHHHHHHHhcCcc
Confidence 999999999999999886
No 77
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.86 E-value=7.3e-21 Score=111.84 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=79.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCC-C------------------------------------chhhhcCCCCCcHHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNP-M------------------------------------SREAKLTRSGDTALHIA 44 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~-~------------------------------------~~~~~~~~~g~t~l~~a 44 (103)
..+|||+|+..|+.+.++.|++.+. . ...+..+..|+||||+|
T Consensus 111 g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A 190 (276)
T 4hbd_A 111 GNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLA 190 (276)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 3589999999999999999998743 1 01122345689999999
Q ss_pred HHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHh-cCccc
Q 038143 45 AAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMAS-KDREL 101 (103)
Q Consensus 45 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~-~~~~l 101 (103)
+..|+.+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++ .|+++
T Consensus 191 ~~~g~~~~v~~Ll~~g-----ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 191 VSHGRVDVVKALLACE-----ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp HHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred HHcCCHHHHHHHHhCC-----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 9999999999999998 8899999999999999999999999999999 66653
No 78
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=2.2e-21 Score=117.37 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=87.6
Q ss_pred hHHHHHHHHhC--CHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 3 VNCLSKFAMTG--QWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 3 ~~~l~~a~~~g--~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
.+|||.|+..| +.++++.|+.. +.+++..|..|.||||+|+..|+.+++++|++.+.+.....++.+|..|.||||
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~ 216 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQL--GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLH 216 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTH
T ss_pred CCHHHHHHHcCCchHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHH
Confidence 58999999999 99999999999 777888999999999999999999999999999833222338999999999999
Q ss_pred HHHHhCCHHHHHHHHhcCccc
Q 038143 81 LAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|+..|+.+++++|++.|+++
T Consensus 217 ~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 217 WAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp HHHTTTCHHHHHHHHTTTCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999998764
No 79
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.86 E-value=7.6e-21 Score=110.78 Aligned_cols=91 Identities=14% Similarity=0.098 Sum_probs=64.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++. +..|.||||+|
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~-~~~g~t~Lh~A 173 (261)
T 2xai_A 102 ASPIHEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRACVKKLLESG-----ADVNQ-GKGQDSPLHAV 173 (261)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT-----CCTTC-CBTTBCHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC-----CCCCC-CCCCCChHHHH
Confidence 3567777777777777777766 4556666777777777777777777777777776 55553 66777777777
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 174 ~~~~~~~~v~~Ll~~gad~ 192 (261)
T 2xai_A 174 ARTASEELACLLMDFGADT 192 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCT
T ss_pred HHcCCHHHHHHHHHcCCCC
Confidence 7777777777777776653
No 80
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.86 E-value=1.1e-20 Score=106.03 Aligned_cols=90 Identities=20% Similarity=0.289 Sum_probs=63.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
+.+|||.|+..|+.+.++.++...+ .+++..+..|.||||+|+..|+.+++++|++.+ ++++.++..|.||||+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG-----ADINLQNSISDSPYLY 78 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHH
Confidence 4567777777777777777776632 346666777777777777777777777777776 6666677777777777
Q ss_pred HHHhCCHHHHHHHHhc
Q 038143 82 AAALGNEAMCHCMASK 97 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~ 97 (103)
|+..|+.+++++|++.
T Consensus 79 A~~~~~~~~~~~Ll~~ 94 (201)
T 3hra_A 79 AGAQGRTEILAYMLKH 94 (201)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHhc
Confidence 7777777777777743
No 81
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.86 E-value=5.4e-21 Score=117.91 Aligned_cols=92 Identities=20% Similarity=0.190 Sum_probs=75.3
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|++. +..++..+..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 279 ~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 279 LTPLHLVAQEGHVPVADVLIKH--GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ-----ADVNAKTKLGYSPLHQA 351 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhC--CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC-----CCCCCCCCCCCCHHHHH
Confidence 4678888888888888877777 5567777888888888888888888888888887 78888888888888888
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.|+++
T Consensus 352 ~~~g~~~iv~~Ll~~ga~~ 370 (437)
T 1n11_A 352 AQQGHTDIVTLLLKNGASP 370 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCS
T ss_pred HHCChHHHHHHHHHCcCCC
Confidence 8888888888888887654
No 82
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=5.8e-21 Score=116.24 Aligned_cols=88 Identities=14% Similarity=0.132 Sum_probs=57.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|
T Consensus 236 ~TpLh~Aa~~g~~~iv~~LL~~--Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~G-----ad~~~~d~~G~TpL~~A 308 (368)
T 3jue_A 236 ATPLIQATAANSLLACEFLLQN--GANVNQADSAGRGPLHHATILGHTGLACLFLKRG-----ADLGARDSEGRDPLTIA 308 (368)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCc-----CCCCCcCCCCCCHHHHH
Confidence 3566666666666666666666 4555666666666666666666666666666666 66666666666666666
Q ss_pred HHhCCHHHHHHHHhc
Q 038143 83 AALGNEAMCHCMASK 97 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~ 97 (103)
+..++.+++++|+..
T Consensus 309 ~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 309 METANADIVTLLRLA 323 (368)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHc
Confidence 666666666666654
No 83
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=7.4e-21 Score=108.48 Aligned_cols=94 Identities=19% Similarity=0.175 Sum_probs=85.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ ..+++.+|..|.||||+
T Consensus 107 g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~d~~g~t~L~~ 180 (228)
T 2dzn_A 107 GVTCLHLAVGKKWFEVSQFLIEN--GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG----KSAVNWQDKQGWTPLFH 180 (228)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT----CCCSCCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHhHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC----cccccCcCCCCCCHHHH
Confidence 35799999999999999999998 6778888999999999999999999999999875 25678899999999999
Q ss_pred HHHhCCHHHHHHHH-hcCccc
Q 038143 82 AAALGNEAMCHCMA-SKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~-~~~~~l 101 (103)
|+..|+.+++++|+ +.|+++
T Consensus 181 A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 181 ALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp HHHTTCHHHHHHHHHHHCCCS
T ss_pred HHHcCCHHHHHHHHHhcCCCC
Confidence 99999999999999 767654
No 84
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.85 E-value=6.7e-21 Score=119.62 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=83.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhc------CCCCCcHHHHHHH---hCChhHHHHHHHHhCcccccccccccC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKL------TRSGDTALHIAAA---AGQTNIVSELVEIMGENASNVLKIQND 73 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~ 73 (103)
.+.||.|+..|+.+.++.++.. +.+++.. +..|+||||+|+. .|+.+++++|++.| ++++.+|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-----a~vn~~d~ 205 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-----GHLDAKAA 205 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-----CCTTCCCS
T ss_pred HHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-----CCCCccCC
Confidence 3579999999999999999999 5555555 7899999999966 89999999999999 99999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 74 RGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 74 ~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
.|.||||+|+..|+.+++++|++.|+++
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 233 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRALV 233 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCCCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999998875
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.85 E-value=1.4e-20 Score=112.86 Aligned_cols=97 Identities=21% Similarity=0.132 Sum_probs=84.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCC-CCCcHHHHHHHhCChhHHHHHHHHhCc-------------------
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTR-SGDTALHIAAAAGQTNIVSELVEIMGE------------------- 62 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ll~~~~~------------------- 62 (103)
.++||.|+..|+.+.|+.||+. +++++..+. .|+||||+|+..|+.+++++|+++|.+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 5789999999999999999999 677777765 599999999999999999999998833
Q ss_pred ---------ccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 63 ---------NASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 63 ---------~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
....+++.+|..|.||+|+|+..|+.+++++|++.|+++
T Consensus 104 ~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~ 151 (337)
T 4g8k_A 104 SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 151 (337)
T ss_dssp CHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Confidence 123456778889999999999999999999999988754
No 86
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.85 E-value=7.3e-21 Score=113.96 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=86.5
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..++||.|+..|+.+.++.++... +.+++..|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG-----ADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHH
T ss_pred cchhHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCcHHHH
Confidence 357999999999999999999863 4667788999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCccc
Q 038143 82 AAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~l 101 (103)
|+..|+.+++++|++.++++
T Consensus 98 A~~~g~~~iv~~Ll~~g~~~ 117 (351)
T 3utm_A 98 ACSYGHYEVTELLLKHGACV 117 (351)
T ss_dssp HHHTTCHHHHHHHHHTTCCT
T ss_pred HHHCCCHHHHHHHHHCCCCC
Confidence 99999999999999998764
No 87
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.9e-20 Score=110.30 Aligned_cols=94 Identities=23% Similarity=0.254 Sum_probs=84.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCch----hhhcCCCCCcHHHHHHHh---CChhHHHHHHHHhCcccccccccccCCC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSR----EAKLTRSGDTALHIAAAA---GQTNIVSELVEIMGENASNVLKIQNDRG 75 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~----~~~~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~g 75 (103)
..+|+.|+..|+.+.+..++..+.... ++..+..|+||||+|+.. ++.+++++|++.| ++++.+|..|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-----a~in~~d~~g 205 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-----GNLDKQTGKG 205 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-----SCTTCCCTTC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-----CCccccCCCC
Confidence 468999999999999999999854432 344578899999999999 8999999999998 8999999999
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 76 DTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 76 ~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
.||||+|+..|+.+++++|++.|+++
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASI 231 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999998865
No 88
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=1.3e-20 Score=110.14 Aligned_cols=89 Identities=25% Similarity=0.201 Sum_probs=42.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhhhc-CCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREAKL-TRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
++|+.|+..|+.+.++.+++. +.+++.. +..|+||||+|+..|+.+++++|++.+ .+++.++..|.||||+|
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 79 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG-----ADPVLRKKNGATPFLLA 79 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHH
Confidence 445555555555555555544 2223322 344455555555555555555555544 44444444444555555
Q ss_pred HHhCCHHHHHHHHhcCc
Q 038143 83 AALGNEAMCHCMASKDR 99 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~ 99 (103)
+..|+.+++++|++.++
T Consensus 80 ~~~~~~~~v~~Ll~~g~ 96 (285)
T 1wdy_A 80 AIAGSVKLLKLFLSKGA 96 (285)
T ss_dssp HHHTCHHHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHcCC
Confidence 44444444444444443
No 89
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.85 E-value=1.6e-20 Score=109.72 Aligned_cols=92 Identities=16% Similarity=0.114 Sum_probs=86.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|++. +.+++..+..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||+|
T Consensus 40 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 112 (285)
T 1wdy_A 40 WTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG-----ADVNECDFYGFTAFMEA 112 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCBCTTCCBHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCcccCCHHHHH
Confidence 5799999999999999999999 6678888999999999999999999999999998 88899999999999999
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|++.++++
T Consensus 113 ~~~~~~~~~~~Ll~~g~~~ 131 (285)
T 1wdy_A 113 AVYGKVKALKFLYKRGANV 131 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCT
T ss_pred HHhCCHHHHHHHHHhCCCc
Confidence 9999999999999998764
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=1.3e-20 Score=112.09 Aligned_cols=92 Identities=15% Similarity=0.158 Sum_probs=83.6
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhh------cCCCCCcHHHHHHHh---CChhHHHHHHHHhCcccccccccccC
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAK------LTRSGDTALHIAAAA---GQTNIVSELVEIMGENASNVLKIQND 73 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~ 73 (103)
.++|+.|+..|+.+.++.++.. +.+++. .+..|+||||+|+.. ++.+++++|++.+ ++++.+|.
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-----advn~~d~ 224 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-----GHLDAKAA 224 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-----SCTTCCCT
T ss_pred HHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-----CCCCCCCC
Confidence 4679999999999999999988 445555 588999999999997 8899999999998 88999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 74 RGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 74 ~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
.|.||||+|+..|+.+++++|++.|+++
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 252 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRALV 252 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999998865
No 91
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=9.5e-21 Score=115.32 Aligned_cols=92 Identities=15% Similarity=0.126 Sum_probs=85.2
Q ss_pred hHHHHHHHHh-CCHHHHHHHHHcCCCchhhhcC--CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHH
Q 038143 3 VNCLSKFAMT-GQWDNIVQAYENNPMSREAKLT--RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAF 79 (103)
Q Consensus 3 ~~~l~~a~~~-g~~~~v~~ll~~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl 79 (103)
.++||.|+.. |+.+.++.++.. +.+++..+ ..|.||||+|+..|+.+++++|++.+ ++++.+|..|.|||
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-----advn~~d~~G~TpL 272 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-----ANVNQADSAGRGPL 272 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHH
T ss_pred CcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-----CCCCCCCCCCCCHH
Confidence 3689999999 999999999998 66677777 89999999999999999999999998 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCccc
Q 038143 80 HLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 80 ~~a~~~~~~~~~~~l~~~~~~l 101 (103)
|+|+..|+.+++++|++.|+++
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGADL 294 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCcHHHHHHHHHCcCCC
Confidence 9999999999999999998764
No 92
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.85 E-value=1.2e-21 Score=113.04 Aligned_cols=92 Identities=15% Similarity=0.070 Sum_probs=84.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCC-cHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGD-TAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~-tpl~ 80 (103)
..+|||.|+..|+.++++.|+.. +.+++..|..|+||||+|+..|+.+++++|++.+ ++++.++..|. ||+|
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~t~l~ 142 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQF--GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG-----AAVFAMTYSDMQTAAD 142 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCSSSCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcceecCCCCcchHH
Confidence 35899999999999999999998 6778889999999999999999999999999998 88999998877 9999
Q ss_pred HH--HHhCCHHHHHHHHhcCcc
Q 038143 81 LA--AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 81 ~a--~~~~~~~~~~~l~~~~~~ 100 (103)
+| +..|+.+++++|++.+++
T Consensus 143 ~a~~~~~g~~~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 143 KCEEMEEGYTQCSQFLYGVQEK 164 (239)
T ss_dssp HCCSSSTTCCCHHHHHHHHHHH
T ss_pred HHHHhhhccHHHHHHHHHhhhc
Confidence 99 788999999999998764
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=1.4e-21 Score=109.34 Aligned_cols=92 Identities=12% Similarity=-0.012 Sum_probs=65.1
Q ss_pred hHHHHHHHHhCCH----HHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC------hhHHHHHHHHhCccccccccccc
Q 038143 3 VNCLSKFAMTGQW----DNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ------TNIVSELVEIMGENASNVLKIQN 72 (103)
Q Consensus 3 ~~~l~~a~~~g~~----~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~------~~~~~~ll~~~~~~~~~~~~~~~ 72 (103)
++|||.|+..|+. ++++.|++. +++++.++..|+||||+|+..++ .+++++|++.| ++++.+|
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-----adin~~d 111 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINK--GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG-----ADITALY 111 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHT--TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT-----CCSSSCB
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC-----CCCCccC
Confidence 5778888887764 367777776 66777778888888888887776 35677788877 7777777
Q ss_pred CCCC-cHHHHHHHhC-----CHHHHHHHHh-cCccc
Q 038143 73 DRGD-TAFHLAAALG-----NEAMCHCMAS-KDREL 101 (103)
Q Consensus 73 ~~g~-tpl~~a~~~~-----~~~~~~~l~~-~~~~l 101 (103)
..|. ||||+|+..+ +.+++++|++ .|+++
T Consensus 112 ~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~ 147 (186)
T 3t8k_A 112 KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147 (186)
T ss_dssp GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT
T ss_pred CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC
Confidence 7777 7777777633 3456777777 66543
No 94
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.84 E-value=2.3e-20 Score=107.00 Aligned_cols=89 Identities=20% Similarity=0.184 Sum_probs=73.4
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ ..++.++..|.||||+|
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQA--GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG-----ALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-----CCCCCCCTTSCCHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHc--CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCC-----CCCCCCCCCCCcHHHHH
Confidence 5788889988998888888888 5667777888888888888888888888888887 66777777788888888
Q ss_pred HHhCCHHHHHHHHhcC
Q 038143 83 AALGNEAMCHCMASKD 98 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~ 98 (103)
+..|+.+++++|++.+
T Consensus 85 ~~~~~~~~~~~Ll~~~ 100 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNG 100 (237)
T ss_dssp HHTTCHHHHHHHHTTT
T ss_pred HHcCCHHHHHHHHhCC
Confidence 8888888888887776
No 95
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=2.4e-20 Score=109.95 Aligned_cols=90 Identities=14% Similarity=0.112 Sum_probs=59.7
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|+.. +.+++..+..|.||||+|+..|+.+++++|++.+ ++++ .+..|.||||+|
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~-~~~~g~t~L~~A 229 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAY--GGNIDHKISHLGTPLYLACENQQRACVKKLLESG-----ADVN-QGKGQDSPLHAV 229 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHT--TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTT-----CCTT-CCBTTBCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCC-----CCCC-CCCCCCCHHHHH
Confidence 3566666666666666666666 4455566666777777777777777777777666 5554 366677777777
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.|++
T Consensus 230 ~~~~~~~~v~~Ll~~gad 247 (285)
T 3d9h_A 230 VRTASEELACLLMDFGAD 247 (285)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCCHHHHHHHHHCCCC
Confidence 777777777777766654
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=2.2e-20 Score=103.93 Aligned_cols=77 Identities=29% Similarity=0.283 Sum_probs=70.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
..+|||.|+..|+.+.++.|++. +.+++..+ ..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||+|
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~--ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~g~tpl~ 148 (183)
T 3deo_A 76 GRTALLFVAGLGSDKCVRLLAEA--GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALE 148 (183)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT-----CCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC-----CCCcCCCCCCCCHHH
Confidence 35899999999999999999998 66777777 88999999999999999999999998 889999999999999
Q ss_pred HHHHh
Q 038143 81 LAAAL 85 (103)
Q Consensus 81 ~a~~~ 85 (103)
+|+..
T Consensus 149 ~A~~~ 153 (183)
T 3deo_A 149 LAREI 153 (183)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99876
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=3e-21 Score=101.31 Aligned_cols=82 Identities=18% Similarity=0.054 Sum_probs=73.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.|++. +.+++..|..|+||||+|+..++.+++++|++.+ ++++.+|..|.||+|+
T Consensus 40 g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~ 112 (123)
T 3aaa_C 40 GRKPLHYAADCGQLEILEFLLLK--GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKG-----ADKTVKGPDGLTAFEA 112 (123)
T ss_dssp SSCHHHHHHHTTCHHHHHHHHTT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHH
Confidence 35899999999999999999988 6778889999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHH
Q 038143 82 AAALGNEAM 90 (103)
Q Consensus 82 a~~~~~~~~ 90 (103)
|...+..++
T Consensus 113 A~~~~~~~l 121 (123)
T 3aaa_C 113 TDNQAIKAL 121 (123)
T ss_dssp CCCHHHHHH
T ss_pred hCCHHHHHH
Confidence 965444433
No 98
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=5.6e-20 Score=105.50 Aligned_cols=91 Identities=16% Similarity=0.105 Sum_probs=50.1
Q ss_pred hHHHHHHHHhCCHHHHHHHHHc--CCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYEN--NPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~--~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
.+|||.|+..|+.+.++.+++. ..+.+++..+..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG-----ASPMALDRHGQTAAH 84 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCCCCCHHH
Confidence 3556666666666666555541 013344455555666666666666666666666555 445555555555555
Q ss_pred HHHHhCCHHHHHHHHhcC
Q 038143 81 LAAALGNEAMCHCMASKD 98 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~ 98 (103)
+|+..|+.+++++|++.+
T Consensus 85 ~A~~~~~~~~~~~Ll~~~ 102 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSA 102 (241)
T ss_dssp HHHHTTCHHHHHHHHHHS
T ss_pred HHHHcCCHHHHHHHHHcC
Confidence 555555555555555544
No 99
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=7.4e-22 Score=105.28 Aligned_cols=91 Identities=14% Similarity=0.069 Sum_probs=80.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.+.++.|++. +.+++..+..|.||||+|+..++.+++++|++.+ ++++.+|..|.||+++
T Consensus 43 g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~tpl~~ 115 (137)
T 3c5r_A 43 GWTPLHEACNHGHLKVVELLLQH--KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG-----ASRNAVNIFGLRPVDY 115 (137)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCGGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc--CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHH
Confidence 35799999999999999999998 6678888999999999999999999999999998 8899999999999999
Q ss_pred HHHhCCHHHHHHHHhcCc
Q 038143 82 AAALGNEAMCHCMASKDR 99 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~ 99 (103)
|+..+..+++++|.+.++
T Consensus 116 A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 116 TDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CCCHHHHHHHSCC-----
T ss_pred HhhccHHHHHhhcccccc
Confidence 999999999888776654
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=1.6e-20 Score=108.73 Aligned_cols=89 Identities=27% Similarity=0.292 Sum_probs=80.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcC-CCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLT-RSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~ 80 (103)
..+|||.|+..|+.++++.|+.. +.+++..+ ..|+||||+|+..|+.+++++|++.+ ++++.+|..|.||||
T Consensus 77 g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~g~t~l~ 149 (244)
T 3ui2_A 77 GRTALLFVAGLGSDKCVRLLAEA--GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG-----ADIEVEDERGLTALE 149 (244)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHT--TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTCCCHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHc--CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHH
Confidence 35899999999999999999999 66777777 88999999999999999999999998 889999999999998
Q ss_pred HHH----------------HhCCHHHHHHHHhc
Q 038143 81 LAA----------------ALGNEAMCHCMASK 97 (103)
Q Consensus 81 ~a~----------------~~~~~~~~~~l~~~ 97 (103)
+|+ ..|+.+++++|++.
T Consensus 150 ~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 150 LAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCHHHHHHHcChHHHHHHHHHh
Confidence 888 66888999999875
No 101
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.83 E-value=4.6e-20 Score=108.86 Aligned_cols=93 Identities=27% Similarity=0.310 Sum_probs=80.0
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhh-------------------------------------------------
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAK------------------------------------------------- 32 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~------------------------------------------------- 32 (103)
..+|||.|+..|+.++++.|+..+. +++.
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 183 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGA--HVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQ 183 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC--CCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHH
Confidence 3579999999999999999998733 2222
Q ss_pred -----------cCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 33 -----------LTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 33 -----------~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
.+..|.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 184 ~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 258 (299)
T 1s70_B 184 WLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-----YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258 (299)
T ss_dssp HHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-----CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 2346889999999999999999999988 889999999999999999999999999999998764
No 102
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.83 E-value=7.4e-20 Score=109.74 Aligned_cols=55 Identities=11% Similarity=0.068 Sum_probs=39.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCC---hhHHHHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQ---TNIVSELVEI 59 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~---~~~~~~ll~~ 59 (103)
.+|||+|+..|+.++|+.|++. +.+++..|..|+||||+|+..|+ .++++.|++.
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 189 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHh
Confidence 5789999999999998888888 56666777777777777777665 3444444443
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=5.3e-21 Score=109.09 Aligned_cols=93 Identities=23% Similarity=0.214 Sum_probs=78.9
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHL 81 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~ 81 (103)
..+|||.|+..|+.++++.|+.. .+.+++..|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||+++
T Consensus 106 g~t~L~~A~~~~~~~~v~~Ll~~-~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~g~t~l~~ 179 (222)
T 3ehr_A 106 GSTALYWACHGGHKDIVEMLFTQ-PNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG-----ARTDLRNIEKKLAFDM 179 (222)
T ss_dssp SCCHHHHHHHTTCHHHHHHHTTS-TTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-----CCSCCCCTTSCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHcC-CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCccccCCCCCHHHH
Confidence 35899999999999999999876 24568888999999999999999999999999999 8999999999999999
Q ss_pred HHHhCCHHHHHHHHhcCcc
Q 038143 82 AAALGNEAMCHCMASKDRE 100 (103)
Q Consensus 82 a~~~~~~~~~~~l~~~~~~ 100 (103)
|+..++.++++.|+..++.
T Consensus 180 A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 180 ATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp CCSHHHHHHHC--------
T ss_pred hcchhHHHHHHHHhccchh
Confidence 9999999999999887653
No 104
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.83 E-value=5.5e-20 Score=110.29 Aligned_cols=88 Identities=13% Similarity=0.011 Sum_probs=69.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
.+|||.|+..|+.+.++.|+... +.+++.+|..|+||||+|+..|+.+++++|+++| ++++ ..+|||+|
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~~-~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G-----Ad~n-----~~~~L~~A 308 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQE-HIEINDTDSDGKTALLLAVELKLKKIAELLCKRG-----ASTD-----CGDLVMTA 308 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTST-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS-----CSST-----TCCHHHHH
T ss_pred CCHHHHHHHhhhhHHHHHHHHhc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCC-----CCCHHHHH
Confidence 46888888888888888877652 4667778888888888888888888888888887 5544 34588888
Q ss_pred HHhCCHHHHHHHHhcCccc
Q 038143 83 AALGNEAMCHCMASKDREL 101 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~l 101 (103)
+..|+.+++++|+++|+++
T Consensus 309 ~~~~~~~iv~~Ll~~GA~~ 327 (337)
T 4g8k_A 309 RRNYDHSLVKVLLSHGAKE 327 (337)
T ss_dssp HHTTCHHHHHHHHHTTCCC
T ss_pred HHcCCHHHHHHHHHCcCCC
Confidence 8888888888888888753
No 105
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.81 E-value=6.1e-19 Score=100.90 Aligned_cols=90 Identities=19% Similarity=0.226 Sum_probs=47.4
Q ss_pred HHHHHHHHhCCHHHHHHHHHcCCCchhh-hcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHH
Q 038143 4 NCLSKFAMTGQWDNIVQAYENNPMSREA-KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLA 82 (103)
Q Consensus 4 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a 82 (103)
+|||.|+..|+.+.++.+++.+. ..+ ..+..|.||||+|+..++.+++++|++.+ .+++.++..|.||||+|
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~A 116 (240)
T 3eu9_A 44 TLLHWAAINNRIDLVKYYISKGA--IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG-----ADPSLIDGEGCSCIHLA 116 (240)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC--CTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHH
T ss_pred CHHHHHHHhCCHHHHHHHHHcCC--cchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHH
Confidence 45555555555555555555422 122 22233555555555555555555555554 55555555666666666
Q ss_pred HHhCCHHHHHHHHhcCcc
Q 038143 83 AALGNEAMCHCMASKDRE 100 (103)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~ 100 (103)
+..|+.+++++|++.+++
T Consensus 117 ~~~~~~~~~~~Ll~~~~~ 134 (240)
T 3eu9_A 117 AQFGHTSIVAYLIAKGQD 134 (240)
T ss_dssp HHTTCHHHHHHHHHTTCC
T ss_pred HHcCHHHHHHHHHhcCCC
Confidence 666666666666655443
No 106
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.80 E-value=5.3e-19 Score=101.16 Aligned_cols=93 Identities=16% Similarity=0.134 Sum_probs=82.4
Q ss_pred chHHHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccccc-CCCCcHHH
Q 038143 2 EVNCLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQN-DRGDTAFH 80 (103)
Q Consensus 2 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~-~~g~tpl~ 80 (103)
..++|+.|+..|+.+.++.+++. +.+++..+..|.||||+|+..|+.+++++|++.+ ..++..+ ..|.||||
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-----~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG-----AIVDQLGGDLNSTPLH 81 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCBTTTTBCHHH
T ss_pred cchHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC-----CcchhhcCCcCCChhH
Confidence 35789999999999999999998 6678888999999999999999999999999998 5555444 55999999
Q ss_pred HHHHhCCHHHHHHHHhcCccc
Q 038143 81 LAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 81 ~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|+..|+.+++++|++.++++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~ 102 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADP 102 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999987654
No 107
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.80 E-value=3.8e-20 Score=112.62 Aligned_cols=89 Identities=19% Similarity=0.118 Sum_probs=54.6
Q ss_pred hHHHHHHHHhCCHHHHHHHH--------HcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCC
Q 038143 3 VNCLSKFAMTGQWDNIVQAY--------ENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDR 74 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll--------~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 74 (103)
.+|||+|+..|+.+.++.++ .. +.+++..|..|.||||+|+..|+.+++++|++.+ ++++.++..
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~--ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----a~~~~~~~~ 198 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAA--GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAG-----ADPTIYNKS 198 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHT--CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTT
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhc--CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCC-----CCCcccCCC
Confidence 45666666666665555444 33 4455566666666666666666666666666665 555566666
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcC
Q 038143 75 GDTAFHLAAALGNEAMCHCMASKD 98 (103)
Q Consensus 75 g~tpl~~a~~~~~~~~~~~l~~~~ 98 (103)
|.||||+|+..|+.+++++|++.+
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~~ 222 (373)
T 2fo1_E 199 ERSALHQAAANRDFGMMVYMLNST 222 (373)
T ss_dssp CCCHHHHHHHTTCHHHHHHHTTSH
T ss_pred CCCHHHHHHHCCCHHHHHHHHhcC
Confidence 666666666666666666665543
No 108
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.80 E-value=3.8e-20 Score=103.52 Aligned_cols=90 Identities=10% Similarity=-0.066 Sum_probs=79.9
Q ss_pred chHHHHHHHHhCC------HHHHHHHHHcCCCchhhhcCCCCC-cHHHHHHHhCC-----hhHHHHHHH-HhCccccccc
Q 038143 2 EVNCLSKFAMTGQ------WDNIVQAYENNPMSREAKLTRSGD-TALHIAAAAGQ-----TNIVSELVE-IMGENASNVL 68 (103)
Q Consensus 2 ~~~~l~~a~~~g~------~~~v~~ll~~~~~~~~~~~~~~g~-t~l~~a~~~~~-----~~~~~~ll~-~~~~~~~~~~ 68 (103)
.++|||.|+..|+ .++++.|++. +++++.+|..|. ||||+|+..+. .+++++|++ .| +++
T Consensus 75 g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~--Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-----ad~ 147 (186)
T 3t8k_A 75 GTTLFFPLFQGGGNDITGTTELCKIFLEK--GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-----LQL 147 (186)
T ss_dssp CCCTHHHHHHHCTTCHHHHHHHHHHHHHT--TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-----CCT
T ss_pred CCcHHHHHHHcCCcchhhHHHHHHHHHHC--CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-----CCC
Confidence 4689999999987 5778889988 788999999999 99999999543 468999999 88 999
Q ss_pred ccccCCCCcHHHHHHHhCCHHHHHHHHhcC
Q 038143 69 KIQNDRGDTAFHLAAALGNEAMCHCMASKD 98 (103)
Q Consensus 69 ~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~ 98 (103)
+.+|..|.||||+|+..|+.+++++|.+..
T Consensus 148 ~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp TCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999999999998753
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.78 E-value=9.2e-20 Score=111.26 Aligned_cols=88 Identities=17% Similarity=0.183 Sum_probs=63.2
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCC---chhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCccccccccc--ccCCCCc
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPM---SREAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKI--QNDRGDT 77 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--~~~~g~t 77 (103)
.+|||.|+..|+.++|+.|++.+++ .+.+..+ +||||+|+..|+.+++++|++.+ ++++. .|..|.|
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~g-----a~~~~~~~d~~g~T 200 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRLCELA-----PTEATAMIQAENYY 200 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHHHHSC-----GGGHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCCHHHHHHHHHcC-----CccchhccCCCCCC
Confidence 3578888888888888888777432 1222222 78888888888888888888877 66555 6777788
Q ss_pred HHHHHH-HhCCHHHHHHHHhcC
Q 038143 78 AFHLAA-ALGNEAMCHCMASKD 98 (103)
Q Consensus 78 pl~~a~-~~~~~~~~~~l~~~~ 98 (103)
|||+|+ ..|+.+++++|++.+
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTTSH
T ss_pred HHHHHHHHCCCHHHHHHHHhCC
Confidence 888888 888888888887754
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=2.5e-18 Score=86.18 Aligned_cols=61 Identities=28% Similarity=0.435 Sum_probs=56.5
Q ss_pred CCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 36 SGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 36 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
+|+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 61 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-----ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4899999999999999999999998 889999999999999999999999999999998764
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.75 E-value=8.4e-19 Score=107.07 Aligned_cols=93 Identities=18% Similarity=0.118 Sum_probs=73.8
Q ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCc-hhhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccc---cccccCCCCcH
Q 038143 3 VNCLSKFAMTGQWDNIVQAYENNPMS-REAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNV---LKIQNDRGDTA 78 (103)
Q Consensus 3 ~~~l~~a~~~g~~~~v~~ll~~~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~---~~~~~~~g~tp 78 (103)
.+|||.|+..|+.+.|+.+++.+... .....+..|.||||+|+..|+.+++++|++.+ ++ .+..+.. .||
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~g-----ad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELA-----PTEIMAMIQAEN-YHA 166 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSC-----TTTHHHHHSHHH-HHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCC-----CCccccccCCCC-CCH
Confidence 48999999999999999999883311 11233456789999999999999999999987 43 2233333 899
Q ss_pred HHHHHHhCCHHHHHHHHhcCccc
Q 038143 79 FHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 79 l~~a~~~~~~~~~~~l~~~~~~l 101 (103)
||+|+..|+.+++++|++.|+++
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~ga~~ 189 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCELAPTE 189 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCGGG
T ss_pred HHHHHHCCCHHHHHHHHHcCCcc
Confidence 99999999999999999999874
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=7.6e-17 Score=83.07 Aligned_cols=67 Identities=22% Similarity=0.246 Sum_probs=59.1
Q ss_pred hhhcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 30 EAKLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 30 ~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
....+..|.|+||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.|+++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~ 83 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANG-----ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 83 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 4456889999999999999999999999998 889999999999999999999999999999998764
No 113
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.67 E-value=1.9e-17 Score=99.34 Aligned_cols=84 Identities=12% Similarity=0.013 Sum_probs=67.0
Q ss_pred HHHHHhCCHHHHHHHHHcCCCchhhh-cCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHh
Q 038143 7 SKFAMTGQWDNIVQAYENNPMSREAK-LTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAAL 85 (103)
Q Consensus 7 ~~a~~~g~~~~v~~ll~~~~~~~~~~-~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 85 (103)
|.++..+..+.++.++.. +.+++. .|..|+||||+|+..|+.+++++|++.| ++++.+|..|.||||+|+..
T Consensus 102 ~~a~~~~~~~~~~~l~~~--g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G-----ad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNT--QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG-----SNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp --CHHHHHHHHHHHCTTS--CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTBCCTTCCCHHHHHHHS
T ss_pred HHHHHhhHHHHHHHHHhc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHh
Confidence 444544555555555555 677888 7999999999999999999999999998 99999999999999999999
Q ss_pred CC---HHHHHHHHhc
Q 038143 86 GN---EAMCHCMASK 97 (103)
Q Consensus 86 ~~---~~~~~~l~~~ 97 (103)
|+ .++++.|++.
T Consensus 175 g~~~~~~~~~~ll~~ 189 (327)
T 1sw6_A 175 VNNYDSGTFEALLDY 189 (327)
T ss_dssp SHHHHTTCHHHHHHH
T ss_pred cccccHHHHHHHHHh
Confidence 88 4555555554
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.67 E-value=9.9e-17 Score=83.00 Aligned_cols=65 Identities=26% Similarity=0.396 Sum_probs=60.9
Q ss_pred hcCCCCCcHHHHHHHhCChhHHHHHHHHhCcccccccccccCCCCcHHHHHHHhCCHHHHHHHHhcCccc
Q 038143 32 KLTRSGDTALHIAAAAGQTNIVSELVEIMGENASNVLKIQNDRGDTAFHLAAALGNEAMCHCMASKDREL 101 (103)
Q Consensus 32 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~l 101 (103)
..|..|+||||+|+..++.+++++|++.+ .+++.+|..|.||||+|+..++.+++++|++.++++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 68 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG-----ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT-----CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 46889999999999999999999999998 888999999999999999999999999999998764
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=88.78 E-value=0.65 Score=18.85 Aligned_cols=18 Identities=11% Similarity=0.056 Sum_probs=12.5
Q ss_pred HHHHHHHhCCHHHHHHHH
Q 038143 5 CLSKFAMTGQWDNIVQAY 22 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll 22 (103)
.+..||..|+++.++.|=
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 456777788887776553
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=79.54 E-value=9.7 Score=24.29 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=39.3
Q ss_pred HHHHHhCCHHHHHHHHHcCCCch----------hhh--cCCCCCcHHHHHHHhCChhHHHHHHHH
Q 038143 7 SKFAMTGQWDNIVQAYENNPMSR----------EAK--LTRSGDTALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 7 ~~a~~~g~~~~v~~ll~~~~~~~----------~~~--~~~~g~t~l~~a~~~~~~~~~~~ll~~ 59 (103)
...+..|+...|+..+..+.+.. .+. .-..|.|.+|+|.+..+.+++..|+..
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 34557799999999998854311 111 135689999999999999999888864
No 117
>3a7m_A Flagellar protein FLIT; UP-DOWN helix bundle, bacterial flagellum biogenesis, chaper cytoplasm, repressor, transcription; 3.20A {Salmonella typhimurium}
Probab=40.49 E-value=24 Score=18.21 Aligned_cols=55 Identities=15% Similarity=0.223 Sum_probs=28.6
Q ss_pred HHHHHHHhCCHHHHHHHHHcCCCchhhhcCCCCCcHHHHHHHhCChhHHHHHHHH
Q 038143 5 CLSKFAMTGQWDNIVQAYENNPMSREAKLTRSGDTALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 59 (103)
.+..++..|+|+.+..+=..+-...-.........++.-+.+....++++.+++.
T Consensus 20 ~ML~aA~~gdWD~Lv~lE~~y~~~Ve~l~~~~~~~~l~~~~~~~~~~lL~~IL~n 74 (122)
T 3a7m_A 20 SLLELAQRGEWDLLLQQEVSYLQSIETVMEKQTPPGITRSIQDMVAGYIKQTLDN 74 (122)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 4567889999999877755522221111222233344444444444555555544
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=24.45 E-value=47 Score=21.39 Aligned_cols=52 Identities=8% Similarity=-0.096 Sum_probs=27.0
Q ss_pred HHHHHhCCHHHHHHHHHcCCCchhhhcCCCC-CcHHHHHHHhCChhHHHHHHHH
Q 038143 7 SKFAMTGQWDNIVQAYENNPMSREAKLTRSG-DTALHIAAAAGQTNIVSELVEI 59 (103)
Q Consensus 7 ~~a~~~g~~~~v~~ll~~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~ll~~ 59 (103)
...+..|+.+....++..-..... .+|..- .+.|...+..|..+-+..+++.
T Consensus 113 ~~~~~~g~~~~A~~l~~~M~~~g~-~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 113 RLAVAKDDPEMAFDMVKQMKAFGI-QPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHcCC-CCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 345577888777777654111000 112111 2345556777887665555554
No 119
>3h3m_A Flagellar protein FLIT; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, flagellum; 2.50A {Bordetella bronchiseptica}
Probab=20.06 E-value=29 Score=18.06 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=14.9
Q ss_pred HHHHHHHhCCHHHHHHHHHc
Q 038143 5 CLSKFAMTGQWDNIVQAYEN 24 (103)
Q Consensus 5 ~l~~a~~~g~~~~v~~ll~~ 24 (103)
.+..|+..|+|+.+..+=..
T Consensus 33 ~ML~aA~~gdWD~Lv~lE~~ 52 (126)
T 3h3m_A 33 RMLAAANASNWDLVLNHGQE 52 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHCcHHHHHHHHHH
Confidence 45678889999988766544
Done!