Query 038151
Match_columns 439
No_of_seqs 123 out of 1584
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 08:06:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038151.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038151hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02534 UDP-glycosyltransfera 100.0 2.1E-64 4.6E-69 503.9 40.5 430 7-436 7-486 (491)
2 PLN02863 UDP-glucoronosyl/UDP- 100.0 3E-63 6.5E-68 496.5 39.7 415 6-438 7-473 (477)
3 PLN03007 UDP-glucosyltransfera 100.0 2.8E-61 6.1E-66 486.2 39.6 427 7-437 4-481 (482)
4 PLN02764 glycosyltransferase f 100.0 4.8E-61 1E-65 473.9 39.6 406 7-439 4-448 (453)
5 PLN00414 glycosyltransferase f 100.0 2.8E-61 6E-66 478.5 37.2 407 7-438 3-442 (446)
6 PLN02208 glycosyltransferase f 100.0 4E-61 8.7E-66 476.9 37.8 404 6-437 2-440 (442)
7 PLN02410 UDP-glucoronosyl/UDP- 100.0 1.2E-60 2.5E-65 474.7 38.0 396 1-436 1-450 (451)
8 PLN02992 coniferyl-alcohol glu 100.0 4.9E-60 1.1E-64 470.7 38.8 395 8-436 5-469 (481)
9 PLN00164 glucosyltransferase; 100.0 8.4E-60 1.8E-64 473.2 38.7 405 7-437 2-474 (480)
10 PLN02173 UDP-glucosyl transfer 100.0 1.3E-59 2.7E-64 465.3 39.3 396 7-435 4-447 (449)
11 PLN03015 UDP-glucosyl transfer 100.0 1.3E-59 2.8E-64 465.1 38.4 398 8-434 3-466 (470)
12 PLN02555 limonoid glucosyltran 100.0 2.5E-59 5.4E-64 466.8 39.1 411 1-436 1-469 (480)
13 PLN02210 UDP-glucosyl transfer 100.0 2.2E-59 4.7E-64 467.3 38.3 400 1-435 1-454 (456)
14 PLN02670 transferase, transfer 100.0 3.9E-58 8.5E-63 456.7 37.4 415 1-437 1-466 (472)
15 PLN02207 UDP-glycosyltransfera 100.0 1.6E-57 3.5E-62 451.9 39.1 408 7-437 2-466 (468)
16 PLN02562 UDP-glycosyltransfera 100.0 2.8E-57 6.2E-62 451.6 38.3 383 7-434 5-447 (448)
17 PLN03004 UDP-glycosyltransfera 100.0 9.2E-58 2E-62 452.2 34.3 391 8-425 3-450 (451)
18 PLN02152 indole-3-acetate beta 100.0 3.6E-57 7.8E-62 448.5 37.4 402 8-434 3-454 (455)
19 PLN02448 UDP-glycosyltransfera 100.0 4.6E-57 1E-61 453.3 37.6 396 7-436 9-457 (459)
20 PLN02167 UDP-glycosyltransfera 100.0 3.7E-56 8.1E-61 447.7 37.1 411 7-437 2-473 (475)
21 PLN02554 UDP-glycosyltransfera 100.0 6.5E-56 1.4E-60 446.6 36.8 405 8-436 2-478 (481)
22 TIGR01426 MGT glycosyltransfer 100.0 1.2E-36 2.7E-41 302.2 24.4 351 14-433 1-389 (392)
23 PHA03392 egt ecdysteroid UDP-g 100.0 7.5E-36 1.6E-40 302.0 25.7 354 8-416 20-449 (507)
24 cd03784 GT1_Gtf_like This fami 100.0 6.1E-37 1.3E-41 305.5 17.2 342 9-416 1-388 (401)
25 COG1819 Glycosyl transferases, 100.0 2.2E-34 4.7E-39 283.8 20.9 352 8-433 1-397 (406)
26 PF00201 UDPGT: UDP-glucoronos 100.0 6.7E-35 1.5E-39 298.9 13.2 163 215-416 244-426 (500)
27 KOG1192 UDP-glucuronosyl and U 100.0 4.9E-33 1.1E-37 285.0 14.9 364 8-414 5-437 (496)
28 PRK12446 undecaprenyldiphospho 99.9 3.9E-23 8.5E-28 201.2 22.2 295 10-409 3-336 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.9 5.2E-21 1.1E-25 184.4 24.3 303 9-412 1-341 (357)
30 PF13528 Glyco_trans_1_3: Glyc 99.9 7.3E-21 1.6E-25 183.8 20.5 289 9-392 1-317 (318)
31 TIGR00661 MJ1255 conserved hyp 99.8 4.8E-18 1E-22 164.2 19.2 84 300-396 228-315 (321)
32 PRK00726 murG undecaprenyldiph 99.8 2.8E-16 6.1E-21 154.3 24.2 115 302-434 236-355 (357)
33 cd03785 GT1_MurG MurG is an N- 99.7 5.2E-15 1.1E-19 144.8 23.4 100 300-409 234-338 (350)
34 TIGR01133 murG undecaprenyldip 99.6 1.4E-13 3.1E-18 134.5 22.5 89 310-408 243-334 (348)
35 PRK13609 diacylglycerol glucos 99.5 5.9E-12 1.3E-16 124.7 25.3 94 301-408 256-351 (380)
36 TIGR00215 lpxB lipid-A-disacch 99.5 2.6E-12 5.6E-17 127.0 19.4 105 312-431 262-383 (385)
37 COG4671 Predicted glycosyl tra 99.5 2.2E-11 4.9E-16 112.8 23.5 315 7-395 8-365 (400)
38 TIGR03590 PseG pseudaminic aci 99.4 1.2E-11 2.7E-16 116.7 18.5 78 269-357 199-278 (279)
39 PRK00025 lpxB lipid-A-disaccha 99.4 9.3E-11 2E-15 116.1 21.1 108 312-435 256-376 (380)
40 PRK13608 diacylglycerol glucos 99.3 1.1E-10 2.4E-15 115.9 20.1 114 300-435 255-370 (391)
41 PF04101 Glyco_tran_28_C: Glyc 99.2 2.6E-12 5.6E-17 112.0 1.7 86 301-396 55-145 (167)
42 PF03033 Glyco_transf_28: Glyc 99.1 1.7E-11 3.6E-16 103.4 2.3 52 11-71 1-52 (139)
43 PLN02605 monogalactosyldiacylg 99.1 8.8E-09 1.9E-13 102.1 19.6 95 300-408 264-361 (382)
44 TIGR03492 conserved hypothetic 99.0 1.3E-07 2.9E-12 93.7 25.3 109 302-431 280-393 (396)
45 cd03814 GT1_like_2 This family 99.0 6.4E-07 1.4E-11 87.2 26.9 96 299-410 245-347 (364)
46 PLN02871 UDP-sulfoquinovose:DA 98.9 8.6E-07 1.9E-11 90.3 26.3 102 293-410 304-415 (465)
47 cd03823 GT1_ExpE7_like This fa 98.8 3.6E-06 7.8E-11 81.6 26.2 94 299-408 241-342 (359)
48 cd04962 GT1_like_5 This family 98.8 3.4E-06 7.4E-11 82.8 26.2 94 300-409 252-350 (371)
49 cd03794 GT1_wbuB_like This fam 98.7 3.4E-06 7.4E-11 82.5 23.5 97 299-411 273-381 (394)
50 cd03800 GT1_Sucrose_synthase T 98.7 7.5E-06 1.6E-10 81.2 24.9 95 300-410 282-383 (398)
51 cd03818 GT1_ExpC_like This fam 98.7 5E-06 1.1E-10 82.8 23.6 97 300-412 280-383 (396)
52 cd03817 GT1_UGDG_like This fam 98.7 9.8E-06 2.1E-10 78.8 24.7 97 300-413 258-361 (374)
53 cd03808 GT1_cap1E_like This fa 98.7 1.1E-05 2.3E-10 77.9 24.3 94 300-409 245-343 (359)
54 COG3980 spsG Spore coat polysa 98.7 9.2E-07 2E-11 80.2 14.6 93 292-396 200-294 (318)
55 cd03801 GT1_YqgM_like This fam 98.6 2.4E-05 5.1E-10 75.6 25.8 93 299-407 254-353 (374)
56 PRK10307 putative glycosyl tra 98.6 8.6E-05 1.9E-09 74.4 30.1 117 300-437 283-408 (412)
57 cd03816 GT1_ALG1_like This fam 98.6 1.8E-05 3.8E-10 79.4 23.6 92 301-410 294-399 (415)
58 cd03798 GT1_wlbH_like This fam 98.5 0.00016 3.6E-09 69.9 28.9 82 300-397 258-346 (377)
59 cd03820 GT1_amsD_like This fam 98.5 4.4E-05 9.6E-10 73.2 24.4 98 300-412 234-336 (348)
60 PRK05749 3-deoxy-D-manno-octul 98.5 4.4E-05 9.5E-10 76.9 24.3 86 313-412 315-405 (425)
61 cd03795 GT1_like_4 This family 98.5 7.5E-05 1.6E-09 72.7 24.8 100 299-412 242-349 (357)
62 TIGR03449 mycothiol_MshA UDP-N 98.4 0.00023 5.1E-09 70.9 27.3 95 300-410 282-383 (405)
63 cd03822 GT1_ecORF704_like This 98.4 0.00012 2.6E-09 71.2 24.5 96 300-412 246-351 (366)
64 cd03821 GT1_Bme6_like This fam 98.4 0.00029 6.3E-09 68.3 26.5 92 300-409 261-359 (375)
65 cd03819 GT1_WavL_like This fam 98.3 0.00024 5.1E-09 69.2 23.5 97 300-412 245-348 (355)
66 PF04007 DUF354: Protein of un 98.3 0.00018 3.8E-09 69.3 21.5 94 19-139 10-112 (335)
67 cd03825 GT1_wcfI_like This fam 98.3 9.6E-05 2.1E-09 72.1 20.5 95 300-410 243-345 (365)
68 cd03799 GT1_amsK_like This is 98.3 0.00038 8.2E-09 67.6 24.0 95 300-410 235-342 (355)
69 cd03805 GT1_ALG2_like This fam 98.2 0.00076 1.7E-08 66.8 25.7 94 300-410 279-379 (392)
70 TIGR02472 sucr_P_syn_N sucrose 98.2 0.00064 1.4E-08 68.7 25.3 95 300-408 316-419 (439)
71 TIGR02468 sucrsPsyn_pln sucros 98.2 0.0016 3.4E-08 70.9 27.8 97 300-410 547-652 (1050)
72 cd05844 GT1_like_7 Glycosyltra 98.1 0.00098 2.1E-08 65.2 22.6 94 300-409 244-350 (367)
73 cd03807 GT1_WbnK_like This fam 98.1 0.0014 3E-08 63.3 22.8 91 300-408 250-345 (365)
74 cd03796 GT1_PIG-A_like This fa 98.0 0.0046 9.9E-08 61.6 26.1 79 300-396 249-334 (398)
75 TIGR03087 stp1 sugar transfera 98.0 0.0014 2.9E-08 65.4 22.2 93 299-409 278-376 (397)
76 COG1519 KdtA 3-deoxy-D-manno-o 98.0 0.0028 6E-08 61.6 23.1 103 301-416 300-407 (419)
77 cd04955 GT1_like_6 This family 98.0 0.0034 7.3E-08 61.2 24.5 90 299-408 246-343 (363)
78 TIGR00236 wecB UDP-N-acetylglu 98.0 0.00064 1.4E-08 66.9 19.3 107 300-432 254-363 (365)
79 cd03811 GT1_WabH_like This fam 98.0 0.0019 4.2E-08 61.8 22.1 89 300-404 245-341 (353)
80 cd04951 GT1_WbdM_like This fam 98.0 0.0015 3.2E-08 63.6 20.8 78 300-395 244-326 (360)
81 PRK09922 UDP-D-galactose:(gluc 97.9 0.0098 2.1E-07 58.3 25.7 97 300-412 235-343 (359)
82 cd03812 GT1_CapH_like This fam 97.9 0.0023 5E-08 62.3 21.1 87 300-403 248-339 (358)
83 cd03802 GT1_AviGT4_like This f 97.9 0.0097 2.1E-07 57.2 24.8 78 300-395 223-308 (335)
84 PRK14089 ipid-A-disaccharide s 97.8 0.00067 1.4E-08 65.8 15.5 91 312-412 230-331 (347)
85 TIGR02149 glgA_Coryne glycogen 97.7 0.025 5.4E-07 55.8 25.1 99 302-410 261-367 (388)
86 cd03786 GT1_UDP-GlcNAc_2-Epime 97.7 0.0013 2.7E-08 64.6 15.1 79 300-396 257-338 (363)
87 cd03809 GT1_mtfB_like This fam 97.5 0.012 2.5E-07 57.1 19.8 94 299-410 251-351 (365)
88 PLN02316 synthase/transferase 97.5 0.18 3.8E-06 55.6 29.0 121 301-438 900-1035(1036)
89 PRK15179 Vi polysaccharide bio 97.4 0.14 3.1E-06 54.4 26.9 97 300-410 573-674 (694)
90 TIGR02470 sucr_synth sucrose s 97.4 0.21 4.7E-06 53.4 27.9 94 300-407 618-725 (784)
91 KOG3349 Predicted glycosyltran 97.4 0.00025 5.5E-09 58.3 4.8 58 305-365 67-129 (170)
92 PLN02846 digalactosyldiacylgly 97.3 0.055 1.2E-06 54.6 21.7 74 304-396 287-364 (462)
93 PRK01021 lpxB lipid-A-disaccha 97.2 0.038 8.2E-07 56.9 19.4 96 312-413 483-589 (608)
94 cd04946 GT1_AmsK_like This fam 97.2 0.0019 4E-08 64.7 10.0 112 300-431 288-406 (407)
95 cd03792 GT1_Trehalose_phosphor 97.2 0.25 5.4E-06 48.6 24.9 111 300-435 251-370 (372)
96 PF02684 LpxB: Lipid-A-disacch 97.1 0.062 1.3E-06 52.6 19.0 106 311-425 254-366 (373)
97 TIGR02095 glgA glycogen/starch 97.1 0.41 8.8E-06 48.9 26.3 79 300-394 345-436 (473)
98 PRK00654 glgA glycogen synthas 97.0 0.34 7.3E-06 49.4 24.4 67 313-394 352-427 (466)
99 COG0763 LpxB Lipid A disacchar 97.0 0.14 3.1E-06 49.5 19.6 110 314-435 261-380 (381)
100 PRK15427 colanic acid biosynth 97.0 0.0082 1.8E-07 60.0 12.1 113 300-435 278-404 (406)
101 TIGR03568 NeuC_NnaA UDP-N-acet 97.0 0.058 1.3E-06 53.1 17.7 74 300-394 261-338 (365)
102 cd03806 GT1_ALG11_like This fa 96.9 0.61 1.3E-05 46.8 26.1 80 300-396 304-393 (419)
103 PF00534 Glycos_transf_1: Glyc 96.8 0.0028 6.1E-08 54.8 6.3 93 300-408 72-171 (172)
104 PLN02275 transferase, transfer 96.8 0.6 1.3E-05 46.0 29.2 76 300-393 285-371 (371)
105 COG0381 WecB UDP-N-acetylgluco 96.8 0.6 1.3E-05 45.3 21.8 109 300-434 261-372 (383)
106 PRK15484 lipopolysaccharide 1, 96.7 0.014 3.1E-07 57.7 11.3 114 300-436 256-377 (380)
107 PLN02949 transferase, transfer 96.6 0.95 2.1E-05 46.0 25.8 114 300-437 334-457 (463)
108 cd03791 GT1_Glycogen_synthase_ 96.5 1.2 2.6E-05 45.4 24.6 83 300-394 350-441 (476)
109 PRK09814 beta-1,6-galactofuran 96.5 0.014 3E-07 56.7 9.1 110 300-431 206-330 (333)
110 cd03804 GT1_wbaZ_like This fam 96.5 0.012 2.7E-07 57.2 8.7 96 298-407 239-339 (351)
111 cd04949 GT1_gtfA_like This fam 95.9 0.025 5.4E-07 55.6 7.5 102 300-414 260-364 (372)
112 TIGR03088 stp2 sugar transfera 95.8 0.1 2.2E-06 51.2 11.8 112 301-435 255-371 (374)
113 cd03813 GT1_like_3 This family 95.8 0.074 1.6E-06 54.4 10.8 95 300-410 353-457 (475)
114 COG5017 Uncharacterized conser 95.7 0.03 6.4E-07 45.5 5.7 66 302-370 47-123 (161)
115 cd01635 Glycosyltransferase_GT 95.6 0.46 1E-05 42.2 14.2 50 300-351 160-217 (229)
116 TIGR02918 accessory Sec system 95.4 0.15 3.2E-06 52.4 11.4 105 300-414 375-485 (500)
117 cd04950 GT1_like_1 Glycosyltra 94.8 4.5 9.8E-05 39.8 29.8 79 300-396 253-341 (373)
118 PF13844 Glyco_transf_41: Glyc 94.5 0.31 6.8E-06 49.0 10.3 117 265-396 309-431 (468)
119 PF13477 Glyco_trans_4_2: Glyc 94.1 0.45 9.7E-06 39.3 9.3 82 10-127 1-82 (139)
120 PF13692 Glyco_trans_1_4: Glyc 93.9 0.079 1.7E-06 43.6 4.3 80 300-395 52-135 (135)
121 PF01975 SurE: Survival protei 92.6 0.44 9.5E-06 42.3 7.0 45 9-54 1-45 (196)
122 PF13524 Glyco_trans_1_2: Glyc 92.6 1.1 2.4E-05 34.0 8.6 82 326-431 9-91 (92)
123 PF02350 Epimerase_2: UDP-N-ac 91.6 0.17 3.8E-06 49.3 3.6 127 269-429 214-344 (346)
124 PRK14098 glycogen synthase; Pr 91.4 2.4 5.1E-05 43.5 11.8 82 300-393 361-449 (489)
125 PHA01633 putative glycosyl tra 90.5 1.5 3.2E-05 42.5 8.8 101 300-412 200-323 (335)
126 PF12000 Glyco_trans_4_3: Gkyc 89.8 4.1 8.8E-05 35.2 10.0 84 34-137 1-95 (171)
127 PRK13932 stationary phase surv 88.8 2.9 6.4E-05 38.6 8.9 58 7-70 4-61 (257)
128 PRK02261 methylaspartate mutas 88.3 1.9 4.2E-05 35.8 6.8 49 7-55 2-50 (137)
129 PRK15490 Vi polysaccharide bio 88.2 7.3 0.00016 40.3 12.1 64 300-370 454-522 (578)
130 PHA01630 putative group 1 glyc 86.2 1.1 2.4E-05 43.4 4.9 34 12-45 3-36 (331)
131 COG3914 Spy Predicted O-linked 85.7 11 0.00025 38.6 11.5 111 265-391 454-574 (620)
132 cd02067 B12-binding B12 bindin 85.6 2.4 5.2E-05 34.1 5.9 45 10-54 1-45 (119)
133 TIGR02400 trehalose_OtsA alpha 85.5 7.2 0.00016 39.6 10.5 102 307-434 342-454 (456)
134 PRK10017 colanic acid biosynth 85.3 4.9 0.00011 40.4 9.0 100 313-435 323-423 (426)
135 PF08660 Alg14: Oligosaccharid 84.9 4.6 9.9E-05 35.0 7.5 35 13-47 2-38 (170)
136 cd03788 GT1_TPS Trehalose-6-Ph 81.8 2.8 6E-05 42.7 5.7 73 305-396 345-428 (460)
137 PF13579 Glyco_trans_4_4: Glyc 81.8 1.9 4.1E-05 35.8 3.9 42 24-72 6-47 (160)
138 PF02441 Flavoprotein: Flavopr 81.3 2 4.3E-05 35.2 3.7 45 9-54 1-45 (129)
139 PRK13933 stationary phase surv 80.9 15 0.00032 34.1 9.5 43 9-53 1-43 (253)
140 PLN02501 digalactosyldiacylgly 79.1 22 0.00047 38.0 11.0 76 302-396 602-682 (794)
141 PLN02939 transferase, transfer 79.1 29 0.00063 38.4 12.4 84 300-394 836-930 (977)
142 TIGR03713 acc_sec_asp1 accesso 78.7 4.4 9.6E-05 41.8 6.1 93 301-414 409-507 (519)
143 PRK13935 stationary phase surv 77.9 6.6 0.00014 36.3 6.3 44 9-54 1-44 (253)
144 PLN00142 sucrose synthase 77.8 6 0.00013 42.8 6.9 72 323-408 670-749 (815)
145 PF02310 B12-binding: B12 bind 75.0 10 0.00023 30.2 6.2 47 9-55 1-47 (121)
146 COG0496 SurE Predicted acid ph 74.7 7.1 0.00015 35.9 5.5 44 9-54 1-44 (252)
147 cd02070 corrinoid_protein_B12- 74.3 11 0.00025 33.4 6.8 49 7-55 81-129 (201)
148 PRK00346 surE 5'(3')-nucleotid 73.7 17 0.00036 33.6 7.8 44 9-54 1-44 (250)
149 COG0438 RfaG Glycosyltransfera 73.3 53 0.0011 30.4 11.8 81 300-396 256-343 (381)
150 PF02951 GSH-S_N: Prokaryotic 72.0 6.1 0.00013 31.9 4.0 38 9-46 1-41 (119)
151 TIGR02370 pyl_corrinoid methyl 71.3 15 0.00032 32.7 6.7 50 7-56 83-132 (197)
152 PLN00142 sucrose synthase 71.2 16 0.00035 39.6 8.1 35 103-137 391-438 (815)
153 TIGR00087 surE 5'/3'-nucleotid 70.4 20 0.00044 32.9 7.6 56 9-70 1-56 (244)
154 COG2185 Sbm Methylmalonyl-CoA 70.3 9.6 0.00021 31.7 4.8 41 7-47 11-51 (143)
155 COG1618 Predicted nucleotide k 68.2 31 0.00067 29.6 7.4 39 7-45 4-42 (179)
156 PF13439 Glyco_transf_4: Glyco 67.9 5.9 0.00013 33.4 3.4 29 17-45 10-38 (177)
157 KOG4626 O-linked N-acetylgluco 67.2 6.1 0.00013 40.8 3.6 113 265-393 783-903 (966)
158 PLN03063 alpha,alpha-trehalose 66.6 24 0.00053 38.6 8.5 98 313-436 371-477 (797)
159 cd02071 MM_CoA_mut_B12_BD meth 66.2 17 0.00036 29.4 5.5 44 10-53 1-44 (122)
160 PF02142 MGS: MGS-like domain 65.8 4.2 9E-05 31.3 1.8 28 25-54 2-29 (95)
161 PF12146 Hydrolase_4: Putative 65.0 15 0.00032 27.2 4.6 35 8-42 15-49 (79)
162 COG4370 Uncharacterized protei 64.9 30 0.00065 32.7 7.3 84 307-403 301-387 (412)
163 cd02069 methionine_synthase_B1 63.7 25 0.00055 31.6 6.7 50 7-56 87-136 (213)
164 COG1817 Uncharacterized protei 62.7 1.2E+02 0.0026 29.0 10.8 96 16-137 7-111 (346)
165 PRK08305 spoVFB dipicolinate s 62.0 13 0.00029 32.8 4.5 43 7-49 4-46 (196)
166 COG1703 ArgK Putative periplas 61.6 37 0.0008 32.2 7.4 41 7-47 50-90 (323)
167 PF04127 DFP: DNA / pantothena 59.3 7.5 0.00016 34.1 2.4 38 8-45 3-52 (185)
168 TIGR00640 acid_CoA_mut_C methy 57.4 1.1E+02 0.0023 25.2 8.9 41 7-47 1-41 (132)
169 cd03793 GT1_Glycogen_synthase_ 56.5 38 0.00082 35.3 7.2 80 311-395 468-552 (590)
170 TIGR01501 MthylAspMutase methy 54.3 52 0.0011 27.2 6.5 47 8-54 1-47 (134)
171 PRK10422 lipopolysaccharide co 54.1 18 0.00039 35.2 4.4 47 7-53 4-52 (352)
172 TIGR02919 accessory Sec system 53.0 27 0.00058 35.3 5.5 80 301-396 328-412 (438)
173 PRK07313 phosphopantothenoylcy 51.9 18 0.00039 31.6 3.6 44 9-53 2-45 (182)
174 PRK05920 aromatic acid decarbo 51.2 23 0.00051 31.6 4.2 45 8-53 3-47 (204)
175 PRK13931 stationary phase surv 50.4 82 0.0018 29.3 7.8 30 25-54 16-48 (261)
176 PRK14099 glycogen synthase; Pr 49.8 55 0.0012 33.6 7.3 39 7-45 2-46 (485)
177 PRK10916 ADP-heptose:LPS hepto 49.3 23 0.0005 34.4 4.3 46 9-54 1-48 (348)
178 COG1484 DnaC DNA replication p 46.6 29 0.00063 32.1 4.3 47 8-54 105-151 (254)
179 PRK14099 glycogen synthase; Pr 46.1 32 0.00069 35.3 4.9 68 320-396 370-448 (485)
180 PRK06029 3-octaprenyl-4-hydrox 45.5 30 0.00064 30.4 3.9 45 9-54 2-47 (185)
181 TIGR03446 mycothiol_Mca mycoth 45.0 2E+02 0.0044 27.1 9.7 22 104-127 108-129 (283)
182 cd02065 B12-binding_like B12 b 44.9 60 0.0013 25.8 5.6 45 10-54 1-45 (125)
183 PRK06732 phosphopantothenate-- 44.9 29 0.00063 31.6 4.0 20 26-45 30-49 (229)
184 PRK10125 putative glycosyl tra 43.9 60 0.0013 32.4 6.4 71 302-389 287-365 (405)
185 PRK02797 4-alpha-L-fucosyltran 43.9 63 0.0014 30.8 6.0 80 301-392 206-291 (322)
186 PRK06249 2-dehydropantoate 2-r 42.5 34 0.00074 32.7 4.3 35 7-46 4-38 (313)
187 PF02374 ArsA_ATPase: Anion-tr 42.4 37 0.0008 32.4 4.4 42 9-50 1-43 (305)
188 PRK06849 hypothetical protein; 41.7 51 0.0011 32.6 5.5 36 7-46 3-38 (389)
189 PF01210 NAD_Gly3P_dh_N: NAD-d 41.7 20 0.00044 30.3 2.3 32 10-46 1-32 (157)
190 TIGR02852 spore_dpaB dipicolin 41.0 36 0.00078 29.9 3.8 39 10-48 2-40 (187)
191 PLN02939 transferase, transfer 41.0 47 0.001 36.8 5.3 41 6-46 479-525 (977)
192 PRK10964 ADP-heptose:LPS hepto 41.0 34 0.00074 32.7 4.0 43 9-51 1-45 (322)
193 PRK10353 3-methyl-adenine DNA 40.3 74 0.0016 27.9 5.5 80 344-427 22-116 (187)
194 PF09001 DUF1890: Domain of un 39.3 21 0.00045 29.4 1.8 32 23-54 14-45 (139)
195 PRK05986 cob(I)alamin adenolsy 39.1 2.7E+02 0.0059 24.5 11.7 99 7-127 21-123 (191)
196 TIGR00421 ubiX_pad polyprenyl 38.9 34 0.00074 29.9 3.3 41 11-52 2-42 (181)
197 PF02585 PIG-L: GlcNAc-PI de-N 37.5 1.5E+02 0.0032 23.7 6.8 24 102-127 85-108 (128)
198 PRK09620 hypothetical protein; 37.5 52 0.0011 30.0 4.4 38 8-45 3-52 (229)
199 TIGR02699 archaeo_AfpA archaeo 37.0 48 0.001 28.8 3.9 42 11-53 2-45 (174)
200 cd00861 ProRS_anticodon_short 36.8 65 0.0014 24.1 4.3 36 8-43 1-38 (94)
201 TIGR00521 coaBC_dfp phosphopan 36.3 45 0.00097 33.1 4.0 47 7-54 2-48 (390)
202 PRK14501 putative bifunctional 36.0 1.1E+02 0.0023 33.3 7.2 111 304-436 345-462 (726)
203 PRK12827 short chain dehydroge 35.8 1.6E+02 0.0034 26.4 7.5 37 1-43 1-37 (249)
204 PRK13982 bifunctional SbtC-lik 35.5 52 0.0011 33.5 4.4 40 6-45 254-305 (475)
205 PF04464 Glyphos_transf: CDP-G 35.3 42 0.00091 32.8 3.7 116 301-431 252-368 (369)
206 PRK14098 glycogen synthase; Pr 34.9 62 0.0013 33.2 5.0 39 7-45 4-48 (489)
207 PRK06522 2-dehydropantoate 2-r 34.7 46 0.00099 31.4 3.8 31 9-44 1-31 (304)
208 PRK10490 sensor protein KdpD; 34.1 92 0.002 34.8 6.4 41 7-47 23-63 (895)
209 PRK12921 2-dehydropantoate 2-r 33.9 44 0.00095 31.6 3.5 32 9-45 1-32 (305)
210 cd07037 TPP_PYR_MenD Pyrimidin 33.2 1E+02 0.0022 26.4 5.2 24 323-346 64-93 (162)
211 cd01124 KaiC KaiC is a circadi 33.0 1.9E+02 0.0042 24.6 7.3 44 11-54 2-45 (187)
212 PF05159 Capsule_synth: Capsul 32.7 49 0.0011 30.7 3.6 42 303-347 185-226 (269)
213 PF05225 HTH_psq: helix-turn-h 32.6 69 0.0015 20.7 3.2 27 381-410 1-27 (45)
214 TIGR02700 flavo_MJ0208 archaeo 32.5 61 0.0013 29.6 4.1 44 11-54 2-47 (234)
215 PF09314 DUF1972: Domain of un 32.4 74 0.0016 27.9 4.3 39 26-71 24-62 (185)
216 PRK13604 luxD acyl transferase 32.2 91 0.002 29.8 5.2 36 7-42 35-70 (307)
217 PRK06067 flagellar accessory p 32.1 2.1E+02 0.0047 25.7 7.7 44 10-53 27-70 (234)
218 COG0678 AHP1 Peroxiredoxin [Po 31.6 1.7E+02 0.0036 24.8 5.9 61 7-68 36-103 (165)
219 TIGR02113 coaC_strep phosphopa 31.6 54 0.0012 28.5 3.3 42 10-52 2-43 (177)
220 PF08323 Glyco_transf_5: Starc 31.5 38 0.00082 31.1 2.5 37 10-46 1-43 (245)
221 cd03789 GT1_LPS_heptosyltransf 31.5 59 0.0013 30.3 3.9 45 10-54 1-47 (279)
222 PF13326 PSII_Pbs27: Photosyst 31.5 2.2E+02 0.0047 23.9 6.8 55 383-437 54-116 (145)
223 PF07015 VirC1: VirC1 protein; 31.0 1.2E+02 0.0026 27.6 5.5 43 11-54 4-47 (231)
224 TIGR02193 heptsyl_trn_I lipopo 30.6 59 0.0013 31.0 3.8 44 10-53 1-46 (319)
225 cd00561 CobA_CobO_BtuR ATP:cor 30.4 3.4E+02 0.0075 23.1 12.0 96 10-127 4-103 (159)
226 cd01974 Nitrogenase_MoFe_beta 30.3 2.8E+02 0.0061 27.9 8.8 27 108-136 368-401 (435)
227 cd07039 TPP_PYR_POX Pyrimidine 29.9 1.2E+02 0.0027 25.8 5.3 25 322-346 66-96 (164)
228 PF10649 DUF2478: Protein of u 29.8 3.5E+02 0.0077 23.0 10.4 109 12-140 2-133 (159)
229 KOG0853 Glycosyltransferase [C 29.8 35 0.00077 34.7 2.1 63 331-405 381-443 (495)
230 PRK05579 bifunctional phosphop 29.6 74 0.0016 31.7 4.3 47 7-54 5-51 (399)
231 PF06506 PrpR_N: Propionate ca 29.3 68 0.0015 27.7 3.6 32 316-348 31-62 (176)
232 PF07429 Glyco_transf_56: 4-al 29.1 1.4E+02 0.0031 29.0 5.9 84 299-394 243-332 (360)
233 cd06559 Endonuclease_V Endonuc 29.0 77 0.0017 28.4 4.0 19 109-127 83-101 (208)
234 PF03720 UDPG_MGDP_dh_C: UDP-g 28.5 69 0.0015 25.0 3.2 27 19-45 11-39 (106)
235 COG1066 Sms Predicted ATP-depe 28.5 2E+02 0.0042 28.8 6.8 43 11-54 96-138 (456)
236 COG3349 Uncharacterized conser 28.2 59 0.0013 33.1 3.4 32 9-45 1-32 (485)
237 PLN02989 cinnamyl-alcohol dehy 27.8 90 0.002 29.7 4.6 36 1-43 1-36 (325)
238 PF13450 NAD_binding_8: NAD(P) 27.4 76 0.0016 22.5 3.0 20 26-45 9-28 (68)
239 cd07038 TPP_PYR_PDC_IPDC_like 27.1 1.1E+02 0.0023 26.1 4.4 25 322-346 62-92 (162)
240 KOG2836 Protein tyrosine phosp 26.8 3E+02 0.0066 22.7 6.5 54 7-72 15-70 (173)
241 PF02558 ApbA: Ketopantoate re 26.7 76 0.0016 26.3 3.4 21 26-46 11-31 (151)
242 PF12695 Abhydrolase_5: Alpha/ 26.7 1.3E+02 0.0029 24.1 4.9 35 11-45 1-35 (145)
243 PF02702 KdpD: Osmosensitive K 26.7 1.1E+02 0.0025 27.2 4.4 40 7-46 4-43 (211)
244 KOG1209 1-Acyl dihydroxyaceton 26.5 91 0.002 28.1 3.8 31 7-42 6-38 (289)
245 PF04244 DPRP: Deoxyribodipyri 26.3 80 0.0017 28.6 3.6 25 21-45 47-71 (224)
246 TIGR02195 heptsyl_trn_II lipop 26.2 72 0.0016 30.6 3.6 44 10-53 1-46 (334)
247 PF01380 SIS: SIS domain SIS d 26.2 1.3E+02 0.0029 23.8 4.7 40 14-53 58-97 (131)
248 PF06925 MGDG_synth: Monogalac 26.1 1.6E+02 0.0036 25.0 5.5 22 104-127 76-97 (169)
249 PF00282 Pyridoxal_deC: Pyrido 25.3 1.5E+02 0.0032 29.3 5.6 71 319-395 103-191 (373)
250 TIGR02201 heptsyl_trn_III lipo 25.3 78 0.0017 30.5 3.7 45 10-54 1-47 (344)
251 PRK04885 ppnK inorganic polyph 24.7 67 0.0014 30.0 2.9 28 320-347 36-69 (265)
252 PRK14619 NAD(P)H-dependent gly 24.6 78 0.0017 30.1 3.4 34 7-45 3-36 (308)
253 CHL00072 chlL photochlorophyll 24.4 1.4E+02 0.0029 28.3 5.0 36 9-44 1-36 (290)
254 COG0541 Ffh Signal recognition 24.3 3.4E+02 0.0073 27.4 7.6 47 7-53 99-145 (451)
255 TIGR02398 gluc_glyc_Psyn gluco 24.0 4.6E+02 0.01 26.9 8.9 109 303-437 364-483 (487)
256 PF10933 DUF2827: Protein of u 24.0 3.1E+02 0.0068 26.8 7.2 94 296-412 248-347 (364)
257 PRK06718 precorrin-2 dehydroge 23.9 2.9E+02 0.0063 24.5 6.7 102 302-416 55-165 (202)
258 cd00550 ArsA_ATPase Oxyanion-t 23.9 1.1E+02 0.0023 28.3 4.1 43 11-54 2-45 (254)
259 PF09334 tRNA-synt_1g: tRNA sy 23.8 69 0.0015 31.8 3.0 35 19-53 16-54 (391)
260 PF04413 Glycos_transf_N: 3-De 23.7 3E+02 0.0066 24.0 6.7 37 11-47 23-61 (186)
261 COG2910 Putative NADH-flavin r 23.7 76 0.0016 27.9 2.7 33 9-45 1-33 (211)
262 cd02032 Bchl_like This family 23.6 1.3E+02 0.0029 27.8 4.7 34 9-42 1-34 (267)
263 PRK05595 replicative DNA helic 23.4 6.2E+02 0.013 25.5 9.8 44 10-53 203-247 (444)
264 cd02072 Glm_B12_BD B12 binding 23.3 2.7E+02 0.0059 22.8 5.8 45 10-54 1-45 (128)
265 COG2085 Predicted dinucleotide 23.2 98 0.0021 27.7 3.5 29 17-47 7-35 (211)
266 PF05762 VWA_CoxE: VWA domain 23.1 1.5E+02 0.0032 26.8 4.8 38 8-45 150-188 (222)
267 PRK13982 bifunctional SbtC-lik 23.0 1.1E+02 0.0025 31.1 4.3 46 8-54 70-115 (475)
268 TIGR01689 EcbF-BcbF capsule bi 22.9 1.6E+02 0.0035 24.0 4.4 26 24-49 28-53 (126)
269 PLN02695 GDP-D-mannose-3',5'-e 22.8 1.4E+02 0.0031 29.1 5.0 35 6-44 19-53 (370)
270 TIGR01007 eps_fam capsular exo 22.8 1.6E+02 0.0034 25.8 4.9 37 9-45 17-55 (204)
271 PF00070 Pyr_redox: Pyridine n 22.5 1.3E+02 0.0029 21.7 3.6 23 24-46 10-32 (80)
272 COG3660 Predicted nucleoside-d 22.2 6.6E+02 0.014 23.6 13.4 37 307-345 234-271 (329)
273 cd03466 Nitrogenase_NifN_2 Nit 22.1 4.9E+02 0.011 26.1 8.8 28 107-136 362-396 (429)
274 PF01695 IstB_IS21: IstB-like 22.1 95 0.0021 26.9 3.2 40 7-46 46-85 (178)
275 cd00860 ThrRS_anticodon ThrRS 22.0 1.8E+02 0.0038 21.3 4.4 34 9-43 2-35 (91)
276 PRK07236 hypothetical protein; 21.9 1.1E+02 0.0023 30.2 3.9 37 1-44 1-37 (386)
277 COG0287 TyrA Prephenate dehydr 21.8 1.1E+02 0.0024 28.8 3.8 42 8-54 3-44 (279)
278 PRK13236 nitrogenase reductase 21.8 1.6E+02 0.0035 27.8 5.0 36 7-42 4-40 (296)
279 cd02034 CooC The accessory pro 21.7 2.1E+02 0.0046 22.7 4.9 37 10-46 1-37 (116)
280 TIGR00745 apbA_panE 2-dehydrop 21.7 81 0.0018 29.5 2.9 19 27-45 5-23 (293)
281 KOG0541 Alkyl hydroperoxide re 21.5 2.4E+02 0.0052 24.0 5.1 60 9-69 44-110 (171)
282 PRK08229 2-dehydropantoate 2-r 21.4 91 0.002 30.0 3.3 32 9-45 3-34 (341)
283 PF01372 Melittin: Melittin; 21.4 14 0.00031 20.4 -1.3 17 328-344 1-17 (26)
284 PRK05647 purN phosphoribosylgl 21.2 5.8E+02 0.013 22.6 8.6 34 9-45 2-37 (200)
285 PF06722 DUF1205: Protein of u 21.0 1.5E+02 0.0032 22.9 3.7 44 7-51 39-89 (97)
286 cd03413 CbiK_C Anaerobic cobal 21.0 4E+02 0.0087 20.7 6.2 49 11-60 3-53 (103)
287 COG4088 Predicted nucleotide k 20.9 1.1E+02 0.0025 27.4 3.3 36 10-45 3-38 (261)
288 KOG1432 Predicted DNA repair e 20.8 1.1E+02 0.0023 29.6 3.4 33 106-140 89-144 (379)
289 PF07991 IlvN: Acetohydroxy ac 20.8 1.3E+02 0.0028 25.8 3.6 35 8-47 4-38 (165)
290 PF13460 NAD_binding_10: NADH( 20.8 1.2E+02 0.0025 25.9 3.6 29 15-45 3-31 (183)
291 PRK13869 plasmid-partitioning 20.7 1.6E+02 0.0035 29.3 4.9 36 8-43 120-157 (405)
292 PRK06935 2-deoxy-D-gluconate 3 20.6 4.5E+02 0.0097 23.7 7.7 33 10-45 16-48 (258)
293 KOG3062 RNA polymerase II elon 20.5 1.8E+02 0.004 26.5 4.5 29 10-38 3-31 (281)
294 TIGR02482 PFKA_ATP 6-phosphofr 20.2 1E+02 0.0022 29.4 3.2 37 314-350 86-126 (301)
295 PF05693 Glycogen_syn: Glycoge 20.1 1.4E+02 0.003 31.4 4.3 94 311-413 463-566 (633)
296 PF01470 Peptidase_C15: Pyrogl 20.1 1.5E+02 0.0032 26.4 4.1 27 9-35 1-29 (202)
No 1
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.1e-64 Score=503.89 Aligned_cols=430 Identities=58% Similarity=1.057 Sum_probs=326.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENW 86 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~ 86 (439)
+++||+++|+|++||++||+.||+.|+.+|+.|||++++.+...+..........+..|+|+.+|+|...+++|++.+..
T Consensus 7 ~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~ 86 (491)
T PLN02534 7 KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENL 86 (491)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCcccc
Confidence 56899999999999999999999999999999999999988766655433211112249999999887656888775543
Q ss_pred CCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhc----
Q 038151 87 DMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSV---- 152 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~---- 152 (439)
.+.+.......+......+.+.+++++++.+.+|+|||+|. ++|||++.|++.+++....++++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~ 166 (491)
T PLN02534 87 DTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAH 166 (491)
T ss_pred ccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhccc
Confidence 33322233444555566788889999886445789999999 9999999999999887765432211
Q ss_pred c------CCcCCCCCCCccccCcccCCccccc----ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcCCceEec
Q 038151 153 S------KVHEMPGLPDQVEITKDQLPEILKK----KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARGGKVWCV 222 (439)
Q Consensus 153 ~------~~~~~pg~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~v 222 (439)
. .+..+||+|+...++..++|.++.. ..+.....+....++++++|||.+||+.+++.++..++++++.|
T Consensus 167 ~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~V 246 (491)
T PLN02534 167 LSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCV 246 (491)
T ss_pred ccCCCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEE
Confidence 0 1123788875444666777764421 12222222223346789999999999999999988777789999
Q ss_pred CcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEEeCCCcch
Q 038151 223 GPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVVRAGDKTK 283 (439)
Q Consensus 223 Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~~~~~~~~ 283 (439)
||++.......+...+......++.+|.+|||+++++||||| ++.++.+|||+++......
T Consensus 247 GPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~ 326 (491)
T PLN02534 247 GPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHS 326 (491)
T ss_pred CcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCcccc
Confidence 999753211110000111111123569999999999999999 7788999999999532111
Q ss_pred hhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhc
Q 038151 284 ELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLR 363 (439)
Q Consensus 284 ~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G 363 (439)
...++.+|++|.+++.+.|+++.+|+||.++|+|+++++|||||||||++||+++|||+|++|++.||+.||+++++.||
T Consensus 327 ~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~ 406 (491)
T PLN02534 327 ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLR 406 (491)
T ss_pred chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhc
Confidence 11122268899888888999999999999999999999999999999999999999999999999999999999989999
Q ss_pred eeEEecccCC---Cc---ccCCCCHHHHHHHHHHhhcC-CCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 038151 364 IGVSIGAERP---LH---LADEVKKEAVEKAVNMLMDE-GGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQ 436 (439)
Q Consensus 364 ~G~~~~~~~~---~~---~~~~~~~~~l~~ai~~vl~~-~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~ 436 (439)
+|+.+..... +. .+..+++++|+++|+++|.+ +++|+++|+||++|++++++++.+||||++++++|+++|..
T Consensus 407 vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~ 486 (491)
T PLN02534 407 IGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLK 486 (491)
T ss_pred ceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 9998852210 00 01138999999999999973 57899999999999999999999999999999999999875
No 2
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3e-63 Score=496.55 Aligned_cols=415 Identities=36% Similarity=0.633 Sum_probs=322.8
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCC
Q 038151 6 SSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCEN 85 (439)
Q Consensus 6 ~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~ 85 (439)
.+++||||+|+|++||++||+.||+.|+.+|+.|||++++.+...+..... ..++++++.+|+|... ++|++.+.
T Consensus 7 ~~~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~----~~~~i~~~~lp~P~~~-~lPdG~~~ 81 (477)
T PLN02863 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLS----KHPSIETLVLPFPSHP-SIPSGVEN 81 (477)
T ss_pred CCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcc----cCCCeeEEeCCCCCcC-CCCCCCcC
Confidence 467999999999999999999999999999999999999988776654421 1235899999887654 78887655
Q ss_pred CCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhccCC
Q 038151 86 WDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVSKV 155 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 155 (439)
..+.+. +....+..+.....+.+++++++.+.+|+|||+|. ++|||++.|++.+++.++.++++....+
T Consensus 82 ~~~~~~-~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~ 160 (477)
T PLN02863 82 VKDLPP-SGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMP 160 (477)
T ss_pred hhhcch-hhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccc
Confidence 433321 33344556666778888888876445789999999 9999999999999999888877542110
Q ss_pred -----------c---CCCCCCCccccCcccCCccccc-------ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHh
Q 038151 156 -----------H---EMPGLPDQVEITKDQLPEILKK-------KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKA 214 (439)
Q Consensus 156 -----------~---~~pg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 214 (439)
. .+||++. ++..++|.+++. ...+.+.......++++++|||.+||+.++++++..
T Consensus 161 ~~~~~~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~ 237 (477)
T PLN02863 161 TKINPDDQNEILSFSKIPNCPK---YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKE 237 (477)
T ss_pred ccccccccccccccCCCCCCCC---cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhh
Confidence 0 2566654 677777765532 112222223345677899999999999999999887
Q ss_pred cC-CceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEE
Q 038151 215 RG-GKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIW 274 (439)
Q Consensus 215 ~~-~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~ 274 (439)
++ ++++.|||+++..........++...+..+++|.+|||+++++||||| ++.++++|||
T Consensus 238 ~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw 317 (477)
T PLN02863 238 LGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIW 317 (477)
T ss_pred cCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEE
Confidence 65 689999999754311000001111111134579999999999999999 7788999999
Q ss_pred EEeCCCcc-hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhh
Q 038151 275 VVRAGDKT-KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFC 353 (439)
Q Consensus 275 ~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~ 353 (439)
+++..... ..... +|++|.+++.+.|+++.+|+||.+||+|+++++|||||||||++||+++|||+|++|++.||+.
T Consensus 318 ~~~~~~~~~~~~~~--lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~ 395 (477)
T PLN02863 318 CVKEPVNEESDYSN--IPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFV 395 (477)
T ss_pred EECCCcccccchhh--CCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchh
Confidence 99853221 11122 8889999998999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 038151 354 NEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQD 433 (439)
Q Consensus 354 na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~ 433 (439)
||+++++++|+|+.+.....+ .++.+++.++|+++|. ++++||+||++|++.+++++++||||++++++|+++
T Consensus 396 na~~v~~~~gvG~~~~~~~~~----~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~ 468 (477)
T PLN02863 396 NASLLVDELKVAVRVCEGADT----VPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKH 468 (477)
T ss_pred hHHHHHHhhceeEEeccCCCC----CcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 999986789999999542111 3689999999999994 246999999999999999999999999999999999
Q ss_pred HHHhh
Q 038151 434 IMQRA 438 (439)
Q Consensus 434 ~~~~~ 438 (439)
|.++.
T Consensus 469 i~~~~ 473 (477)
T PLN02863 469 VVELG 473 (477)
T ss_pred HHHhc
Confidence 98753
No 3
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.8e-61 Score=486.20 Aligned_cols=427 Identities=48% Similarity=0.846 Sum_probs=317.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcc--cCCCCeEEEEeeCCCccCCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGI--QSGLPIQVIEFRFPCQEVGLPEGCE 84 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~ 84 (439)
+++||||+|+|++||++|++.||++|+.+|++|||++++.+...+++.+.... ..+..+++..+++|..+.++|++.+
T Consensus 4 ~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e 83 (482)
T PLN03007 4 EKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCE 83 (482)
T ss_pred CCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCcc
Confidence 56899999999999999999999999999999999999988877766543321 1122357777777766557777654
Q ss_pred CCCCCC---C---cCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHh
Q 038151 85 NWDMLP---S---ITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLH 148 (439)
Q Consensus 85 ~~~~~~---~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~ 148 (439)
.....+ . ......+......+.+.+++++++ .+|||||+|. ++|||++.|++++++....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~--~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~ 161 (482)
T PLN03007 84 NVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLET--TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASY 161 (482)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHH
Confidence 432111 1 122333444556788888888887 6899999999 999999999998887766554
Q ss_pred hhhccC----------CcCCCCCCCccccCcccCCccccc---ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhc
Q 038151 149 SLSVSK----------VHEMPGLPDQVEITKDQLPEILKK---KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKAR 215 (439)
Q Consensus 149 ~~~~~~----------~~~~pg~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 215 (439)
...... ...+||+|..+.++..+++..-.. ..++....+....++++++|||.+||+++.+.++...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~ 241 (482)
T PLN03007 162 CIRVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFV 241 (482)
T ss_pred HHHhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhcc
Confidence 322110 112677764333444444432111 2223333445677889999999999999898887766
Q ss_pred CCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEE
Q 038151 216 GGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVV 276 (439)
Q Consensus 216 ~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~ 276 (439)
..++++|||+............+....+..+.+|.+|||+++++||||| ++..+.+|||++
T Consensus 242 ~~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~ 321 (482)
T PLN03007 242 AKRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVV 321 (482)
T ss_pred CCCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 5689999998654321100000011112234679999999999999999 677899999999
Q ss_pred eCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHH
Q 038151 277 RAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEK 356 (439)
Q Consensus 277 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~ 356 (439)
+........... +|++|.+++.+.|+++.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+
T Consensus 322 ~~~~~~~~~~~~-lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~ 400 (482)
T PLN03007 322 RKNENQGEKEEW-LPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEK 400 (482)
T ss_pred ecCCcccchhhc-CCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHH
Confidence 964221111112 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhceeEEecccCCC-cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 357 LVVQVLRIGVSIGAERPL-HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 357 rv~~~~G~G~~~~~~~~~-~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
++++.+++|+.+...... .....+++++|+++|+++|.+ +++++||+||+++++.+++++++||||++++++|++.+.
T Consensus 401 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~-~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~ 479 (482)
T PLN03007 401 LVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVG-EEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELN 479 (482)
T ss_pred HHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 997667888776421100 000148999999999999985 678999999999999999999999999999999999998
Q ss_pred Hh
Q 038151 436 QR 437 (439)
Q Consensus 436 ~~ 437 (439)
++
T Consensus 480 ~~ 481 (482)
T PLN03007 480 SR 481 (482)
T ss_pred hc
Confidence 64
No 4
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=4.8e-61 Score=473.89 Aligned_cols=406 Identities=25% Similarity=0.411 Sum_probs=312.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENW 86 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~ 86 (439)
.++||+|+|+|++||++||+.||+.|+.+|+.|||++++.+...+.+. ... ..++++..+++|..+ |+|++.+.+
T Consensus 4 ~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~--~~~--~~~~~v~~~~~p~~~-glp~g~e~~ 78 (453)
T PLN02764 4 LKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL--NLF--PHNIVFRSVTVPHVD-GLPVGTETV 78 (453)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc--ccC--CCCceEEEEECCCcC-CCCCccccc
Confidence 579999999999999999999999999999999999999876655442 100 113445555555433 787765543
Q ss_pred CCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEechhHHHHHHHhhhhccCCcC
Q 038151 87 DMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFHGFSGFCLSCLHSLSVSKVHE 157 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (439)
.+.+. .....+..+.....+.+++++++ .+|+|||+|. ++|||++.|++++++.++.+.+........
T Consensus 79 ~~~~~-~~~~~~~~a~~~~~~~~~~~l~~--~~~~~iV~D~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~ 155 (453)
T PLN02764 79 SEIPV-TSADLLMSAMDLTRDQVEVVVRA--VEPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVP 155 (453)
T ss_pred ccCCh-hHHHHHHHHHHHhHHHHHHHHHh--CCCCEEEECCchhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCC
Confidence 33331 22334555666778999999988 5789999999 999999999999998888876421111123
Q ss_pred CCCCCCc-cccCcccCCcccc--c-------ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcCCceEecCcccc
Q 038151 158 MPGLPDQ-VEITKDQLPEILK--K-------KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARGGKVWCVGPVSF 227 (439)
Q Consensus 158 ~pg~~~~-~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~vGp~~~ 227 (439)
+||+|.. +.++..+++.+.. . ..++.+....+..++++++|||.+||+.++++++...+++++.|||++.
T Consensus 156 ~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~ 235 (453)
T PLN02764 156 PPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFP 235 (453)
T ss_pred CCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCcc
Confidence 5777631 1244455554311 1 1223333345677889999999999999999997754568999999975
Q ss_pred cCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEEeCCCcchhhhhh
Q 038151 228 FNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVVRAGDKTKELEEW 288 (439)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~~~~~~~~~~~~~ 288 (439)
..... ...+.+|.+|||+++++||||| |+.++.+|+|+++...........
T Consensus 236 ~~~~~----------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~ 305 (453)
T PLN02764 236 EPDKT----------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEA 305 (453)
T ss_pred Ccccc----------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhh
Confidence 42100 0024679999999999999999 678899999999964221111222
Q ss_pred hchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEe
Q 038151 289 LSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSI 368 (439)
Q Consensus 289 ~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~ 368 (439)
+|++|.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||+|++|++.||+.||+++++.+|+|+.+
T Consensus 306 -lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~ 384 (453)
T PLN02764 306 -LPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEV 384 (453)
T ss_pred -CCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996579999988
Q ss_pred cccCCCcccCCCCHHHHHHHHHHhhcCC-CccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhC
Q 038151 369 GAERPLHLADEVKKEAVEKAVNMLMDEG-GEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQRAK 439 (439)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~~~ 439 (439)
..++.+ .++.++|+++|+++|+++ ++++++|+||++++++++ +||||++++++|+++++.+.+
T Consensus 385 ~~~~~~----~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 385 AREETG----WFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred ccccCC----ccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHhcc
Confidence 542111 389999999999999865 678899999999999984 489999999999999988753
No 5
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2.8e-61 Score=478.49 Aligned_cols=407 Identities=26% Similarity=0.398 Sum_probs=310.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENW 86 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~ 86 (439)
.++||+|+|+|++||++||+.||+.|+++|++|||++++.+...++.... ...+|+|..+++|..+ ++|++.+..
T Consensus 3 ~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~----~~~~i~~~~i~lP~~d-GLP~g~e~~ 77 (446)
T PLN00414 3 SKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNL----FPDSIVFEPLTLPPVD-GLPFGAETA 77 (446)
T ss_pred CCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhccccc----CCCceEEEEecCCCcC-CCCCccccc
Confidence 46799999999999999999999999999999999999987666554321 1124899888777544 787765433
Q ss_pred CCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEechhHHHHHHHhhhhccCCcC
Q 038151 87 DMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFHGFSGFCLSCLHSLSVSKVHE 157 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (439)
.+... .....+......+.+.+++++++ .+|||||+|. ++|||++.|++.++...+.+.+........
T Consensus 78 ~~l~~-~~~~~~~~a~~~l~~~l~~~L~~--~~p~cVV~D~~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~ 154 (446)
T PLN00414 78 SDLPN-STKKPIFDAMDLLRDQIEAKVRA--LKPDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFP 154 (446)
T ss_pred ccchh-hHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEECCchhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCC
Confidence 32221 11223455566778888888876 6899999999 999999999999999888876532211123
Q ss_pred CCCCCCc-cccCccc--CCccccc-ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcCCceEecCcccccCCCch
Q 038151 158 MPGLPDQ-VEITKDQ--LPEILKK-KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARGGKVWCVGPVSFFNKEDI 233 (439)
Q Consensus 158 ~pg~~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~ 233 (439)
+||+|.. +.++..+ ++.++.. ...+.+..+.+..++++++|||.+||+.+++.++..++++++.|||+++.....
T Consensus 155 ~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~- 233 (446)
T PLN00414 155 PPDYPLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNK- 233 (446)
T ss_pred CCCCCCCcCcCchhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccc-
Confidence 5677641 1122222 2233321 223333445567789999999999999999999876667899999997532110
Q ss_pred hhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEEeCCCcchhhhhhhchhhH
Q 038151 234 DKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVVRAGDKTKELEEWLSEEKF 294 (439)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~~~~~~~~~~~~~~~p~~~ 294 (439)
.. ...+.+|.+|||+++++||||| ++.++.+|+|+++..........+ +|++|
T Consensus 234 ----~~---~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~-lp~~f 305 (446)
T PLN00414 234 ----SG---KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEA-LPEGF 305 (446)
T ss_pred ----cC---cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhh-CChhH
Confidence 00 0123569999999999999999 778899999999874221111223 99999
Q ss_pred HHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 295 EERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 295 ~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||+|++|++.||+.||+++++++|+|+.+..+..+
T Consensus 306 ~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~ 385 (446)
T PLN00414 306 EERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSG 385 (446)
T ss_pred HHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999997689999999643111
Q ss_pred cccCCCCHHHHHHHHHHhhcCC-CccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh
Q 038151 375 HLADEVKKEAVEKAVNMLMDEG-GEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQRA 438 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~-~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~~ 438 (439)
.+++++|+++++++|+++ ++++++|++|+++++.+. ++||+| ..+++|++++..+.
T Consensus 386 ----~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~~~~~ 442 (446)
T PLN00414 386 ----WFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEALENEV 442 (446)
T ss_pred ----ccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHHHHhc
Confidence 389999999999999765 568899999999999964 458834 22899999997653
No 6
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=4e-61 Score=476.85 Aligned_cols=404 Identities=23% Similarity=0.381 Sum_probs=311.5
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCC
Q 038151 6 SSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCEN 85 (439)
Q Consensus 6 ~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~ 85 (439)
++++||+|+|+|++||++|++.||+.|+++||+|||++++.+...+++.. .....+++..+++|..+ ++|++.+.
T Consensus 2 ~~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~----a~~~~i~~~~l~~p~~d-gLp~g~~~ 76 (442)
T PLN02208 2 EPKFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN----LFPDSIVFHPLTIPPVN-GLPAGAET 76 (442)
T ss_pred CCCCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc----CCCCceEEEEeCCCCcc-CCCCCccc
Confidence 35789999999999999999999999999999999999987766654431 11225788887765333 67766442
Q ss_pred CCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEechhHHHHHHHhhhhccC-C
Q 038151 86 WDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFHGFSGFCLSCLHSLSVSK-V 155 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~~~~~~~~~~~~~~~~~~-~ 155 (439)
...+. ......+......+.+.+++++++ .++||||+|. ++|||++.|+++++.... +++.+... .
T Consensus 77 ~~~l~-~~l~~~~~~~~~~~~~~l~~~L~~--~~~~cVV~D~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~~~~~ 152 (442)
T PLN02208 77 TSDIP-ISMDNLLSEALDLTRDQVEAAVRA--LRPDLIFFDFAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPGGKLG 152 (442)
T ss_pred ccchh-HHHHHHHHHHHHHHHHHHHHHHhh--CCCeEEEECCcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCccccC
Confidence 21111 122223445566788889999887 6899999999 999999999999988654 55543211 2
Q ss_pred cCCCCCCCc-cccCcccCCccccc----ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcCCceEecCcccccCC
Q 038151 156 HEMPGLPDQ-VEITKDQLPEILKK----KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARGGKVWCVGPVSFFNK 230 (439)
Q Consensus 156 ~~~pg~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~ 230 (439)
..+||+|.. +.++..++|.+... ..+..+..+....++++++|||.+||+.++++++..++++++.|||+....+
T Consensus 153 ~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~ 232 (442)
T PLN02208 153 VPPPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD 232 (442)
T ss_pred CCCCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC
Confidence 236888752 23455566643111 1122222235567899999999999999999998877789999999975422
Q ss_pred CchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEEeCCCcchhhhhhhch
Q 038151 231 EDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVVRAGDKTKELEEWLSE 291 (439)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~~~~~~~~~~~~~~~p 291 (439)
.. ...+.+|.+|||++++++|||| ++..+.+|+|+++.........+. +|
T Consensus 233 ~~----------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~-lp 301 (442)
T PLN02208 233 TS----------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEG-LP 301 (442)
T ss_pred CC----------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhh-CC
Confidence 00 0124679999999998999999 457789999999864211111122 89
Q ss_pred hhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 292 EKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 292 ~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
++|.+++.+.|+++.+|+||.+||.|+++++|||||||||++||+++|||+|++|+++||+.||+++++.+|+|+.++.+
T Consensus 302 ~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 381 (442)
T PLN02208 302 EGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE 381 (442)
T ss_pred HHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999986569999999754
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCC-CccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEG-GEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQR 437 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~ 437 (439)
+.+ .+++++|+++|+++|+++ ++++++|+||+++++.+. ++|||++++++|++++.++
T Consensus 382 ~~~----~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 382 KTG----WFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred cCC----cCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 211 389999999999999876 578999999999999973 3789999999999999775
No 7
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.2e-60 Score=474.73 Aligned_cols=396 Identities=28% Similarity=0.486 Sum_probs=301.1
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCC
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLP 80 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 80 (439)
|..+. +++||+++|+|++||++||+.||+.|+.+|+.|||++++.+... .. ....+|++..+| +|+|
T Consensus 1 ~~~~~-~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~--~~-----~~~~~i~~~~ip-----~glp 67 (451)
T PLN02410 1 MEEKP-ARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--PS-----DDFTDFQFVTIP-----ESLP 67 (451)
T ss_pred CCcCC-CCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc--cc-----cCCCCeEEEeCC-----CCCC
Confidence 66666 88999999999999999999999999999999999999976421 11 111358898886 3676
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhc----CCCCeEEEEeC----------CCCcccEEEechhHHHHHH
Q 038151 81 EGCENWDMLPSITLVPKFFSAVEMLQLPLENLFREI----QPKPSCLISDI----------KFNVPRIVFHGFSGFCLSC 146 (439)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~ 146 (439)
++... +. .....+......+...+++++++. +.+++|||+|. ++|||++.|++.+++.++.
T Consensus 68 ~~~~~--~~---~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~ 142 (451)
T PLN02410 68 ESDFK--NL---GPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVC 142 (451)
T ss_pred ccccc--cc---CHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHH
Confidence 63211 11 112222222234555566666542 24679999999 8999999999999988877
Q ss_pred Hhhhhcc----------C-----CcCCCCCCCccccCcccCCccccc-----ccchHHHHHhhccccEEEEcCccccCHH
Q 038151 147 LHSLSVS----------K-----VHEMPGLPDQVEITKDQLPEILKK-----KSFGAPVLAAEMASYGVIVNSFEELEPA 206 (439)
Q Consensus 147 ~~~~~~~----------~-----~~~~pg~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~l~~~ 206 (439)
+.++... . ...+||+++ ++..++|.+... ...+... ..+..++++++|||.+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~ 218 (451)
T PLN02410 143 RSVFDKLYANNVLAPLKEPKGQQNELVPEFHP---LRCKDFPVSHWASLESIMELYRNT-VDKRTASSVIINTASCLESS 218 (451)
T ss_pred HHHHHHHHhccCCCCccccccCccccCCCCCC---CChHHCcchhcCCcHHHHHHHHHH-hhcccCCEEEEeChHHhhHH
Confidence 6653211 0 112677765 555666653311 1111111 13467889999999999999
Q ss_pred HHHHHHHhcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------ecc
Q 038151 207 YVEEYKKARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEA 267 (439)
Q Consensus 207 ~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~ 267 (439)
++++++...++++++|||+....+.. ...+....+|.+|||+++++||||| ++.
T Consensus 219 ~~~~l~~~~~~~v~~vGpl~~~~~~~-------~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~ 291 (451)
T PLN02410 219 SLSRLQQQLQIPVYPIGPLHLVASAP-------TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDS 291 (451)
T ss_pred HHHHHHhccCCCEEEecccccccCCC-------ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHh
Confidence 99999876667899999997542110 0011123568999999999999999 788
Q ss_pred CCCceEEEEeCCCc-chhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccc
Q 038151 268 TKKPFIWVVRAGDK-TKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWP 346 (439)
Q Consensus 268 ~~~~~v~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P 346 (439)
++++|+|+++.... ....... +|++|.+++.+.+ .+.+|+||.+||+|+++++|||||||||++||+++|||+|++|
T Consensus 292 s~~~FlWv~r~~~~~~~~~~~~-lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P 369 (451)
T PLN02410 292 SNQQFLWVIRPGSVRGSEWIES-LPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKP 369 (451)
T ss_pred cCCCeEEEEccCcccccchhhc-CChhHHHhccCCe-EEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEecc
Confidence 89999999985321 1111111 7899999887665 5558999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHH
Q 038151 347 FFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLN 426 (439)
Q Consensus 347 ~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~ 426 (439)
++.||+.||+++++.+|+|+.+.. .+++++|+++|+++|.++ ++++||+||++|++++++++++||||+++
T Consensus 370 ~~~DQ~~na~~~~~~~~~G~~~~~--------~~~~~~v~~av~~lm~~~-~~~~~r~~a~~l~~~~~~a~~~gGsS~~~ 440 (451)
T PLN02410 370 FSSDQKVNARYLECVWKIGIQVEG--------DLDRGAVERAVKRLMVEE-EGEEMRKRAISLKEQLRASVISGGSSHNS 440 (451)
T ss_pred ccccCHHHHHHHHHHhCeeEEeCC--------cccHHHHHHHHHHHHcCC-cHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 999999999999767799999974 399999999999999864 48899999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 038151 427 IKLLIQDIMQ 436 (439)
Q Consensus 427 ~~~~~~~~~~ 436 (439)
+++|+++|..
T Consensus 441 l~~fv~~~~~ 450 (451)
T PLN02410 441 LEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=4.9e-60 Score=470.74 Aligned_cols=395 Identities=28% Similarity=0.463 Sum_probs=308.4
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHH-hCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLA-KQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENW 86 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~-~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~ 86 (439)
++||+++|+|++||++||+.||+.|+ .+|+.|||++++.+...+.+.... ..+|+++.+|+|... ++++...
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~----~~~i~~~~lp~p~~~-glp~~~~-- 77 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLN----STGVDIVGLPSPDIS-GLVDPSA-- 77 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhcccc----CCCceEEECCCcccc-CCCCCCc--
Confidence 57999999999999999999999998 789999999999876554332111 125999999876543 5542211
Q ss_pred CCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhcc---
Q 038151 87 DMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVS--- 153 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~--- 153 (439)
+....+......+.+.+++++++...+|+|||+|. ++|||++.|++++++.++.+.+.+..
T Consensus 78 ------~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~ 151 (481)
T PLN02992 78 ------HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKD 151 (481)
T ss_pred ------cHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccc
Confidence 11223333444667888888876445799999999 99999999999999887776554321
Q ss_pred -C--------CcCCCCCCCccccCcccCCccc-cc----ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHh--c--
Q 038151 154 -K--------VHEMPGLPDQVEITKDQLPEIL-KK----KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKA--R-- 215 (439)
Q Consensus 154 -~--------~~~~pg~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~--~-- 215 (439)
. ...+||+++ ++..++|..+ .. ...+.+....+..++++++|||.+||+.++++++.. .
T Consensus 152 ~~~~~~~~~~~~~iPg~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~ 228 (481)
T PLN02992 152 IKEEHTVQRKPLAMPGCEP---VRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGR 228 (481)
T ss_pred cccccccCCCCcccCCCCc---cCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhcccccc
Confidence 0 122667664 5666676432 21 122333344567788999999999999999998652 1
Q ss_pred --CCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEE
Q 038151 216 --GGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIW 274 (439)
Q Consensus 216 --~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~ 274 (439)
.++++.|||+++..... ..+.+|.+|||+++++||||| ++.++++|||
T Consensus 229 ~~~~~v~~VGPl~~~~~~~-----------~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW 297 (481)
T PLN02992 229 VARVPVYPIGPLCRPIQSS-----------KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVW 297 (481)
T ss_pred ccCCceEEecCccCCcCCC-----------cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEE
Confidence 25799999997532110 134579999999999999999 7788999999
Q ss_pred EEeCCCc---------------chhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcC
Q 038151 275 VVRAGDK---------------TKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNG 339 (439)
Q Consensus 275 ~~~~~~~---------------~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~G 339 (439)
+++.... .....++ +|++|.+++.+.|+++.+|+||.+||+|+++++|||||||||++||+++|
T Consensus 298 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~G 376 (481)
T PLN02992 298 VVRPPVDGSACSAYFSANGGETRDNTPEY-LPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGG 376 (481)
T ss_pred EEeCCcccccccccccCcccccccchhhh-CCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcC
Confidence 9974211 0111223 89999999999999999999999999999999999999999999999999
Q ss_pred CCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH-
Q 038151 340 LPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIE- 418 (439)
Q Consensus 340 vP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~- 418 (439)
||+|++|+++||+.||+++++++|+|+.++... + .++.++|+++|+++|.+ ++++++|++|+++++.+++++.
T Consensus 377 VP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~----~~~~~~l~~av~~vm~~-~~g~~~r~~a~~~~~~a~~Av~~ 450 (481)
T PLN02992 377 VPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK-E----VISRSKIEALVRKVMVE-EEGEEMRRKVKKLRDTAEMSLSI 450 (481)
T ss_pred CCEEecCccchhHHHHHHHHHHhCeeEEecCCC-C----cccHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999955999999997521 0 38999999999999985 5788999999999999999994
Q ss_pred -cCCchHHHHHHHHHHHHH
Q 038151 419 -EGGSSSLNIKLLIQDIMQ 436 (439)
Q Consensus 419 -~gG~~~~~~~~~~~~~~~ 436 (439)
+||||++++++|++++..
T Consensus 451 ~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 451 DGGGVAHESLCRVTKECQR 469 (481)
T ss_pred CCCCchHHHHHHHHHHHHH
Confidence 699999999999998865
No 9
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=8.4e-60 Score=473.19 Aligned_cols=405 Identities=30% Similarity=0.511 Sum_probs=311.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCC----CeEEEEeCCCCch----hhhhhhhhcccCCCCeEEEEeeCCCccCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQG----AFVTIVTTPKNAA----RFQNVIERGIQSGLPIQVIEFRFPCQEVG 78 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~G----h~V~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (439)
++.||||+|+|++||++||+.||+.|+.+| +.|||++++.+.. .+..........+.+|+++.+|++ .
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~ 77 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAV----E 77 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCC----C
Confidence 467999999999999999999999999997 7899999876532 343332221112225999988753 1
Q ss_pred CCCCCCCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHh
Q 038151 79 LPEGCENWDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLH 148 (439)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~ 148 (439)
++++.+ .....+......+.+.+++++++...+++|||+|. ++|||++.|++++++.++.+.
T Consensus 78 ~p~~~e--------~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~ 149 (480)
T PLN00164 78 PPTDAA--------GVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALML 149 (480)
T ss_pred CCCccc--------cHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHh
Confidence 222211 11122222445677788888876434579999999 999999999999999988887
Q ss_pred hhhccC------------CcCCCCCCCccccCcccCCccccc-----ccchHHHHHhhccccEEEEcCccccCHHHHHHH
Q 038151 149 SLSVSK------------VHEMPGLPDQVEITKDQLPEILKK-----KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEY 211 (439)
Q Consensus 149 ~~~~~~------------~~~~pg~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 211 (439)
+.+... +..+||++. ++..++|.++.. ...+....+.+..++++++|||.+||+.+++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~iPGlp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~ 226 (480)
T PLN00164 150 RLPALDEEVAVEFEEMEGAVDVPGLPP---VPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAI 226 (480)
T ss_pred hhhhhcccccCcccccCcceecCCCCC---CChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHH
Confidence 764211 113677765 677778765432 122233344567788999999999999999999
Q ss_pred HHhc------CCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------ec
Q 038151 212 KKAR------GGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LE 266 (439)
Q Consensus 212 ~~~~------~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~ 266 (439)
+... .++++.|||++...... ..+..+.+|.+|||+++++||||| ++
T Consensus 227 ~~~~~~~~~~~~~v~~vGPl~~~~~~~--------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~ 298 (480)
T PLN00164 227 ADGRCTPGRPAPTVYPIGPVISLAFTP--------PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLE 298 (480)
T ss_pred HhccccccCCCCceEEeCCCccccccC--------CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHH
Confidence 7642 15899999997432110 001134679999999999999999 77
Q ss_pred cCCCceEEEEeCCCcc-------hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcC
Q 038151 267 ATKKPFIWVVRAGDKT-------KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNG 339 (439)
Q Consensus 267 ~~~~~~v~~~~~~~~~-------~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~G 339 (439)
.++++|||+++..... ....++ +|++|.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|
T Consensus 299 ~s~~~flWv~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~G 377 (480)
T PLN00164 299 RSGHRFLWVLRGPPAAGSRHPTDADLDEL-LPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHG 377 (480)
T ss_pred HcCCCEEEEEcCCcccccccccccchhhh-CChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcC
Confidence 8899999999854210 011223 88899999999999999999999999999999999999999999999999
Q ss_pred CCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCC-ccHHHHHHHHHHHHHHHHHHH
Q 038151 340 LPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGG-EGDERRRRAKEYGEMAKRAIE 418 (439)
Q Consensus 340 vP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~~r~~a~~l~~~~~~~~~ 418 (439)
||||+||+++||+.||+++++++|+|+.+...++. +..+++++|+++|+++|.+++ +++++|+||++|+++++++++
T Consensus 378 VP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~--~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~ 455 (480)
T PLN00164 378 VPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR--DNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVE 455 (480)
T ss_pred CCEEeCCccccchhHHHHHHHHhCeEEEecccccc--CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998876689999998643110 013799999999999998766 599999999999999999999
Q ss_pred cCCchHHHHHHHHHHHHHh
Q 038151 419 EGGSSSLNIKLLIQDIMQR 437 (439)
Q Consensus 419 ~gG~~~~~~~~~~~~~~~~ 437 (439)
+||||++++++|+++|...
T Consensus 456 ~gGSS~~~l~~~v~~~~~~ 474 (480)
T PLN00164 456 EGGSSYAALQRLAREIRHG 474 (480)
T ss_pred CCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999764
No 10
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-59 Score=465.26 Aligned_cols=396 Identities=26% Similarity=0.429 Sum_probs=302.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCC-CC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGC-EN 85 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~~ 85 (439)
++.||+|+|+|++||++||+.||+.|+.+|+.|||++++.+...+... ..++|+++.+| +|+|++. +.
T Consensus 4 ~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~------~~~~i~~~~ip-----dglp~~~~~~ 72 (449)
T PLN02173 4 MRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD------PSSPISIATIS-----DGYDQGGFSS 72 (449)
T ss_pred CCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC------CCCCEEEEEcC-----CCCCCccccc
Confidence 457999999999999999999999999999999999999765544221 12359999886 3777632 22
Q ss_pred CCCCCCcCcHHHHHHHH-HHhhHHHHHHHHhcC--CCC-eEEEEeC----------CCCcccEEEechhHHHHHHHhhhh
Q 038151 86 WDMLPSITLVPKFFSAV-EMLQLPLENLFREIQ--PKP-SCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLS 151 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~--~~p-d~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~ 151 (439)
.. . ...+.... ....+.+++++++.. .+| +|||+|. ++|||++.|++++++....+++..
T Consensus 73 ~~-----~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~ 146 (449)
T PLN02173 73 AG-----S-VPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSY 146 (449)
T ss_pred cc-----C-HHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHH
Confidence 11 1 22233333 356777777777531 245 9999999 999999999998888776655421
Q ss_pred cc---CCcCCCCCCCccccCcccCCccccc-------ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcCCceEe
Q 038151 152 VS---KVHEMPGLPDQVEITKDQLPEILKK-------KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARGGKVWC 221 (439)
Q Consensus 152 ~~---~~~~~pg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~ 221 (439)
.. ....+||+|. ++..++|.++.. ...+.+..+....++++++|||.+||+.+++.++.. .+++.
T Consensus 147 ~~~~~~~~~~pg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~--~~v~~ 221 (449)
T PLN02173 147 INNGSLTLPIKDLPL---LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV--CPVLT 221 (449)
T ss_pred hccCCccCCCCCCCC---CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc--CCeeE
Confidence 11 1234788875 667788775542 111223344567788999999999999999998654 47999
Q ss_pred cCcccccCC--CchhhhhcCC--CCC--CCcccccccccCCCCCcEEEE-----------------eccCCCceEEEEeC
Q 038151 222 VGPVSFFNK--EDIDKVERGN--KAS--IDCSGCLKWLDSWEPSSVVYA-----------------LEATKKPFIWVVRA 278 (439)
Q Consensus 222 vGp~~~~~~--~~~~~~~~~~--~~~--~~~~~~~~~l~~~~~~~vVyv-----------------l~~~~~~~v~~~~~ 278 (439)
|||+++... ...+ ..... ..| ..+.+|.+|||+++++||||| ...++.+|+|+++.
T Consensus 222 VGPl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~ 300 (449)
T PLN02173 222 IGPTVPSMYLDQQIK-SDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRA 300 (449)
T ss_pred EcccCchhhcccccc-ccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEec
Confidence 999975311 0000 00010 111 123469999999999999999 11267899999985
Q ss_pred CCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHH
Q 038151 279 GDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLV 358 (439)
Q Consensus 279 ~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv 358 (439)
.... . +|+++.++..+.|+.+.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++||+.||+++
T Consensus 301 ~~~~----~--lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v 374 (449)
T PLN02173 301 SEES----K--LPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYI 374 (449)
T ss_pred cchh----c--ccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHH
Confidence 3211 1 788998888778899899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 359 VQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 359 ~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
++.+|+|+.+..++... .++.++|+++|+++|++ ++++++|+||+++++++++++++||||++++++|++++.
T Consensus 375 ~~~~g~Gv~v~~~~~~~---~~~~e~v~~av~~vm~~-~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 375 QDVWKVGVRVKAEKESG---IAKREEIEFSIKEVMEG-EKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHhCceEEEeecccCC---cccHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 76779999997542111 36999999999999985 668999999999999999999999999999999999885
No 11
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.3e-59 Score=465.06 Aligned_cols=398 Identities=27% Similarity=0.455 Sum_probs=307.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCCchhh--hhhhhhcccCCCCeEEEEeeCCCccCCCC-CCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQ-GAFVTIVTTPKNAARF--QNVIERGIQSGLPIQVIEFRFPCQEVGLP-EGC 83 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~-Gh~V~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-~~~ 83 (439)
+.||+++|+|++||++||+.||+.|+.+ |..|||++++.+...+ ......... .++|+++.+|++..+ +++ .+
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~-~~~i~~~~lp~~~~~-~l~~~~- 79 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAA-RTTCQITEIPSVDVD-NLVEPD- 79 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccC-CCceEEEECCCCccc-cCCCCC-
Confidence 5699999999999999999999999987 9999999888655433 111111111 125999999865432 332 11
Q ss_pred CCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcc-cEEEechhHHHHHHHhhhhc
Q 038151 84 ENWDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVP-RIVFHGFSGFCLSCLHSLSV 152 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP-~v~~~~~~~~~~~~~~~~~~ 152 (439)
. +....+......+...+++++++...+|+|||+|. ++||| .+.|++++++..+.+++.+.
T Consensus 80 -------~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~ 151 (470)
T PLN03015 80 -------A-TIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPV 151 (470)
T ss_pred -------c-cHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhh
Confidence 1 22334555556788889999987444789999999 99999 58888888888777766531
Q ss_pred c-----C-------CcCCCCCCCccccCcccCCccccc--cc---chHHHHHhhccccEEEEcCccccCHHHHHHHHHhc
Q 038151 153 S-----K-------VHEMPGLPDQVEITKDQLPEILKK--KS---FGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKAR 215 (439)
Q Consensus 153 ~-----~-------~~~~pg~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 215 (439)
. . +..+||+|. ++..++|..+.. .. .+....+.+..++++++|||.+||+.+++.++..+
T Consensus 152 ~~~~~~~~~~~~~~~~~vPg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~ 228 (470)
T PLN03015 152 LDTVVEGEYVDIKEPLKIPGCKP---VGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDM 228 (470)
T ss_pred hhcccccccCCCCCeeeCCCCCC---CChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhc
Confidence 1 1 122678875 677777764422 11 11122334678999999999999999999997752
Q ss_pred ------CCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCC
Q 038151 216 ------GGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKK 270 (439)
Q Consensus 216 ------~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~ 270 (439)
.++++.|||++..... ...+.+|.+|||+++++||||| ++.+++
T Consensus 229 ~~~~~~~~~v~~VGPl~~~~~~-----------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~ 297 (470)
T PLN03015 229 ELNRVMKVPVYPIGPIVRTNVH-----------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQ 297 (470)
T ss_pred ccccccCCceEEecCCCCCccc-----------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCC
Confidence 2569999999742100 0123479999999999999999 778899
Q ss_pred ceEEEEeCCCc--------chhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCE
Q 038151 271 PFIWVVRAGDK--------TKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPM 342 (439)
Q Consensus 271 ~~v~~~~~~~~--------~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~ 342 (439)
+|||+++.... .+...++ +|++|.+++++.++++.+|+||.++|+|+++++|||||||||++||+++|||+
T Consensus 298 ~FlWv~r~~~~~~~~~~~~~~~~~~~-lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~ 376 (470)
T PLN03015 298 RFVWVLRRPASYLGASSSDDDQVSAS-LPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPI 376 (470)
T ss_pred cEEEEEecCccccccccccccchhhc-CChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCE
Confidence 99999984311 1112223 89999999999999999999999999999999999999999999999999999
Q ss_pred eccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcC-CCccHHHHHHHHHHHHHHHHHHHcCC
Q 038151 343 VTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDE-GGEGDERRRRAKEYGEMAKRAIEEGG 421 (439)
Q Consensus 343 v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~r~~a~~l~~~~~~~~~~gG 421 (439)
+++|++.||+.||+++++.+|+|+.+...... ..++.++|+++|+++|.. +++|+++|+||++|++++++++++||
T Consensus 377 v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~---~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGG 453 (470)
T PLN03015 377 VAWPLYAEQWMNATLLTEEIGVAVRTSELPSE---KVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGG 453 (470)
T ss_pred EecccccchHHHHHHHHHHhCeeEEecccccC---CccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999997899999999521111 148999999999999963 47899999999999999999999999
Q ss_pred chHHHHHHHHHHH
Q 038151 422 SSSLNIKLLIQDI 434 (439)
Q Consensus 422 ~~~~~~~~~~~~~ 434 (439)
||++++++|++++
T Consensus 454 SS~~nl~~~~~~~ 466 (470)
T PLN03015 454 SSYNSLFEWAKRC 466 (470)
T ss_pred cHHHHHHHHHHhc
Confidence 9999999999886
No 12
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.5e-59 Score=466.84 Aligned_cols=411 Identities=28% Similarity=0.456 Sum_probs=305.7
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhh--hc--ccCC-CCeEEEEeeCCCc
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIE--RG--IQSG-LPIQVIEFRFPCQ 75 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~--~~--~~~~-~~i~~~~~~~~~~ 75 (439)
|.++. .+.||+++|+|++||++||+.||+.|+.+|..|||++++.+...+.+... .. ...+ ..++|..+|
T Consensus 1 ~~~~~-~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~p---- 75 (480)
T PLN02555 1 MESES-SLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFE---- 75 (480)
T ss_pred CCCCC-CCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCC----
Confidence 66666 78999999999999999999999999999999999999977665543110 00 0001 125554443
Q ss_pred cCCCCCCCCCCCCCCCcCcHHHHHHHH-HHhhHHHHHHHHhc---CCCCeEEEEeC----------CCCcccEEEechhH
Q 038151 76 EVGLPEGCENWDMLPSITLVPKFFSAV-EMLQLPLENLFREI---QPKPSCLISDI----------KFNVPRIVFHGFSG 141 (439)
Q Consensus 76 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~---~~~pd~vv~D~----------~lgiP~v~~~~~~~ 141 (439)
+|+|++.+.. . +. ..++... ..+.+.++++++.. ..+++|||+|. ++|||+++|+++++
T Consensus 76 -dglp~~~~~~---~--~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a 148 (480)
T PLN02555 76 -DGWAEDDPRR---Q--DL-DLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSC 148 (480)
T ss_pred -CCCCCCcccc---c--CH-HHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccH
Confidence 3676654321 1 11 2233333 24567777777642 13349999999 99999999999999
Q ss_pred HHHHHHhhhhcc----C-------CcCCCCCCCccccCcccCCccccc-------ccchHHHHHhhccccEEEEcCcccc
Q 038151 142 FCLSCLHSLSVS----K-------VHEMPGLPDQVEITKDQLPEILKK-------KSFGAPVLAAEMASYGVIVNSFEEL 203 (439)
Q Consensus 142 ~~~~~~~~~~~~----~-------~~~~pg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~l 203 (439)
+.++.++++... . +..+||+|. ++..++|.++.. .+.+.+..+....++++++|||.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eL 225 (480)
T PLN02555 149 ACFSAYYHYYHGLVPFPTETEPEIDVQLPCMPL---LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQEL 225 (480)
T ss_pred HHHHHHHHHhhcCCCcccccCCCceeecCCCCC---cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHH
Confidence 998887776331 0 123788875 677778765532 1112233345667889999999999
Q ss_pred CHHHHHHHHHhcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------
Q 038151 204 EPAYVEEYKKARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA------------------- 264 (439)
Q Consensus 204 ~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv------------------- 264 (439)
|+.+++.++... +++.|||++........ ..+...+..+.+|.+|||++++++||||
T Consensus 226 E~~~~~~l~~~~--~v~~iGPl~~~~~~~~~--~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~ 301 (480)
T PLN02555 226 EKEIIDYMSKLC--PIKPVGPLFKMAKTPNS--DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYG 301 (480)
T ss_pred hHHHHHHHhhCC--CEEEeCcccCccccccc--cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHH
Confidence 999999887643 39999999754211000 0111112234679999999999999999
Q ss_pred eccCCCceEEEEeCCCcc--hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCE
Q 038151 265 LEATKKPFIWVVRAGDKT--KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPM 342 (439)
Q Consensus 265 l~~~~~~~v~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~ 342 (439)
++..+++|||+++..... ..... +|+++.++..+ |..+.+|+||.+||.|+++++|||||||||++||+++|||+
T Consensus 302 l~~~~~~flW~~~~~~~~~~~~~~~--lp~~~~~~~~~-~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~ 378 (480)
T PLN02555 302 VLNSGVSFLWVMRPPHKDSGVEPHV--LPEEFLEKAGD-KGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPV 378 (480)
T ss_pred HHhcCCeEEEEEecCcccccchhhc--CChhhhhhcCC-ceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCE
Confidence 777899999999853211 01112 78888777654 55667999999999999999999999999999999999999
Q ss_pred eccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCc
Q 038151 343 VTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGS 422 (439)
Q Consensus 343 v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~ 422 (439)
|++|++.||+.||+++++.+|+|+.+...... ...++.++|+++|+++|.+ ++++++|+||++|++++++++++|||
T Consensus 379 l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~--~~~v~~~~v~~~v~~vm~~-~~g~~~r~ra~~l~~~a~~A~~egGS 455 (480)
T PLN02555 379 VCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAE--NKLITREEVAECLLEATVG-EKAAELKQNALKWKEEAEAAVAEGGS 455 (480)
T ss_pred EeCCCccccHHHHHHHHHHhCceEEccCCccc--cCcCcHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999997778999999532100 0148999999999999974 67899999999999999999999999
Q ss_pred hHHHHHHHHHHHHH
Q 038151 423 SSLNIKLLIQDIMQ 436 (439)
Q Consensus 423 ~~~~~~~~~~~~~~ 436 (439)
|++++++|++++..
T Consensus 456 S~~~l~~~v~~i~~ 469 (480)
T PLN02555 456 SDRNFQEFVDKLVR 469 (480)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 13
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=2.2e-59 Score=467.31 Aligned_cols=400 Identities=29% Similarity=0.484 Sum_probs=299.1
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHH--HHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCC
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARL--LAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVG 78 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~--L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 78 (439)
|++...++.||+|+|+|++||++|++.||++ |+++|++|||++++.+...++... .....+++..+| +|
T Consensus 1 ~~~~~~~~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~----~~~~~~~~~~~~-----~g 71 (456)
T PLN02210 1 MGSSEGQETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVE----KPRRPVDLVFFS-----DG 71 (456)
T ss_pred CCCcCCCCCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhcccc----CCCCceEEEECC-----CC
Confidence 6666657889999999999999999999999 569999999999998766553321 112235655544 36
Q ss_pred CCCCCCCCCCCCCcCcHHHHHHHH-HHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHH
Q 038151 79 LPEGCENWDMLPSITLVPKFFSAV-EMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCL 147 (439)
Q Consensus 79 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~ 147 (439)
+|++... ... .+...+ ..+.+.+++++++ .+|||||+|. ++|||++.|++.++..+..+
T Consensus 72 lp~~~~~-------~~~-~~~~~~~~~~~~~l~~~l~~--~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~ 141 (456)
T PLN02210 72 LPKDDPR-------APE-TLLKSLNKVGAKNLSKIIEE--KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVY 141 (456)
T ss_pred CCCCccc-------CHH-HHHHHHHHhhhHHHHHHHhc--CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHH
Confidence 7665311 111 233333 3566778888887 6899999998 99999999999998887776
Q ss_pred hhhhcc-----------CCcCCCCCCCccccCcccCCccccc------ccchHHHHHhhccccEEEEcCccccCHHHHHH
Q 038151 148 HSLSVS-----------KVHEMPGLPDQVEITKDQLPEILKK------KSFGAPVLAAEMASYGVIVNSFEELEPAYVEE 210 (439)
Q Consensus 148 ~~~~~~-----------~~~~~pg~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~ 210 (439)
.+.... ....+||++. ++..+++.++.. ...+....+....++++++|||.+||+.+++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~Pgl~~---~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~ 218 (456)
T PLN02210 142 YRYYMKTNSFPDLEDLNQTVELPALPL---LEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIES 218 (456)
T ss_pred HhhhhccCCCCcccccCCeeeCCCCCC---CChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHH
Confidence 654210 0123677664 566667664432 11222333445667899999999999999998
Q ss_pred HHHhcCCceEecCcccccC---CCchhhhhcC--CCCCCCcccccccccCCCCCcEEEE-------------------ec
Q 038151 211 YKKARGGKVWCVGPVSFFN---KEDIDKVERG--NKASIDCSGCLKWLDSWEPSSVVYA-------------------LE 266 (439)
Q Consensus 211 ~~~~~~~~v~~vGp~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~ 266 (439)
+++. +++++|||+++.. ....+ .... ...|..+.+|.+|||+++++||||| ++
T Consensus 219 l~~~--~~v~~VGPl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~ 295 (456)
T PLN02210 219 MADL--KPVIPIGPLVSPFLLGDDEEE-TLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALK 295 (456)
T ss_pred Hhhc--CCEEEEcccCchhhcCccccc-ccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHH
Confidence 8763 5899999997531 11000 0000 0112345679999999999999999 77
Q ss_pred cCCCceEEEEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccc
Q 038151 267 ATKKPFIWVVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWP 346 (439)
Q Consensus 267 ~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P 346 (439)
.++.+|||+++...... .+.++.++...++.+|.+|+||.+||+|+++++|||||||||++||+++|||+|++|
T Consensus 296 ~~~~~flw~~~~~~~~~------~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P 369 (456)
T PLN02210 296 NRGVPFLWVIRPKEKAQ------NVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYP 369 (456)
T ss_pred hCCCCEEEEEeCCcccc------chhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecc
Confidence 88999999998532111 334555665323345679999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHH
Q 038151 347 FFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLN 426 (439)
Q Consensus 347 ~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~ 426 (439)
++.||+.||+++++.+|+|+.+...+..+ .+++++|+++|+++|++ ++|+++|+||++|++.+++++++||||+++
T Consensus 370 ~~~DQ~~na~~~~~~~g~G~~l~~~~~~~---~~~~~~l~~av~~~m~~-~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~ 445 (456)
T PLN02210 370 SWTDQPIDARLLVDVFGIGVRMRNDAVDG---ELKVEEVERCIEAVTEG-PAAADIRRRAAELKHVARLALAPGGSSARN 445 (456)
T ss_pred cccccHHHHHHHHHHhCeEEEEeccccCC---cCCHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 99999999999964599999996432111 48999999999999975 668899999999999999999999999999
Q ss_pred HHHHHHHHH
Q 038151 427 IKLLIQDIM 435 (439)
Q Consensus 427 ~~~~~~~~~ 435 (439)
+++|+++|.
T Consensus 446 l~~~v~~~~ 454 (456)
T PLN02210 446 LDLFISDIT 454 (456)
T ss_pred HHHHHHHHh
Confidence 999999885
No 14
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.9e-58 Score=456.70 Aligned_cols=415 Identities=28% Similarity=0.484 Sum_probs=311.3
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCC
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLP 80 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 80 (439)
|.... ++||||+|+|++||++||+.||+.|+.+|+.|||++++.+...+...... ...+|+++.+|+|..+ |+|
T Consensus 1 ~~~~~--~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~---~~~~i~~~~lp~p~~d-glp 74 (472)
T PLN02670 1 MKREE--VLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQ---LSSSITLVSFPLPSVP-GLP 74 (472)
T ss_pred CCCCC--CcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhcccc---CCCCeeEEECCCCccC-CCC
Confidence 44444 68999999999999999999999999999999999999877665432111 1235999999988765 788
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhh
Q 038151 81 EGCENWDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSL 150 (439)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~ 150 (439)
++.+...+... .....+......+.+.+++++++ .+++|||+|. ++|||++.|++.++...+.++++
T Consensus 75 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~--~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~ 151 (472)
T PLN02670 75 SSAESSTDVPY-TKQQLLKKAFDLLEPPLTTFLET--SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPP 151 (472)
T ss_pred CCcccccccch-hhHHHHHHHHHHhHHHHHHHHHh--CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhh
Confidence 76543322211 11123445556788889999988 6899999999 99999999999998888776544
Q ss_pred hcc----------CCc-CCCCCCC---ccccCcccCCccccc-------ccchHHHHHhhccccEEEEcCccccCHHHHH
Q 038151 151 SVS----------KVH-EMPGLPD---QVEITKDQLPEILKK-------KSFGAPVLAAEMASYGVIVNSFEELEPAYVE 209 (439)
Q Consensus 151 ~~~----------~~~-~~pg~~~---~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 209 (439)
... ... .+|++.+ ...++..++|.++.. ...+.+....+..++++++|||.+||+.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~ 231 (472)
T PLN02670 152 SSLMEGGDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFD 231 (472)
T ss_pred HhhhhcccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHH
Confidence 210 011 1444322 112444566665431 1111222334567889999999999999999
Q ss_pred HHHHhcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCC
Q 038151 210 EYKKARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKK 270 (439)
Q Consensus 210 ~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~ 270 (439)
.++..++++++.|||+++....... ........+.+|.+|||++++++|||| ++.+++
T Consensus 232 ~l~~~~~~~v~~VGPl~~~~~~~~~---~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~ 308 (472)
T PLN02670 232 LLSDLYRKPIIPIGFLPPVIEDDEE---DDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSET 308 (472)
T ss_pred HHHHhhCCCeEEEecCCcccccccc---ccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCC
Confidence 9987666789999999753111000 000000113579999999988999999 778899
Q ss_pred ceEEEEeCCCcc-hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEecccccc
Q 038151 271 PFIWVVRAGDKT-KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 349 (439)
Q Consensus 271 ~~v~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~ 349 (439)
+|||+++..... ....++ +|++|.+++.+.++++.+|+||.+||+|+++++|||||||||++||+++|||+|++|+++
T Consensus 309 ~FlWv~r~~~~~~~~~~~~-lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~ 387 (472)
T PLN02670 309 PFFWVLRNEPGTTQNALEM-LPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLN 387 (472)
T ss_pred CEEEEEcCCcccccchhhc-CChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchh
Confidence 999999863211 111122 899999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Q 038151 350 DQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKL 429 (439)
Q Consensus 350 DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~ 429 (439)
||+.||+++ +++|+|+.++..+.++ .++.++|+++|+++|.+ ++|++||+||+++++.+++ .+.-...++.
T Consensus 388 DQ~~Na~~v-~~~g~Gv~l~~~~~~~---~~~~e~i~~av~~vm~~-~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~ 458 (472)
T PLN02670 388 EQGLNTRLL-HGKKLGLEVPRDERDG---SFTSDSVAESVRLAMVD-DAGEEIRDKAKEMRNLFGD----MDRNNRYVDE 458 (472)
T ss_pred ccHHHHHHH-HHcCeeEEeeccccCC---cCcHHHHHHHHHHHhcC-cchHHHHHHHHHHHHHHhC----cchhHHHHHH
Confidence 999999999 5899999997542111 48999999999999985 5788999999999999885 4666778888
Q ss_pred HHHHHHHh
Q 038151 430 LIQDIMQR 437 (439)
Q Consensus 430 ~~~~~~~~ 437 (439)
+++++.+.
T Consensus 459 ~~~~l~~~ 466 (472)
T PLN02670 459 LVHYLREN 466 (472)
T ss_pred HHHHHHHh
Confidence 88888764
No 15
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.6e-57 Score=451.89 Aligned_cols=408 Identities=26% Similarity=0.461 Sum_probs=299.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCc-hhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQG--AFVTIVTTPKNA-ARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGC 83 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~G--h~V~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 83 (439)
++.||+|+|+|++||++||+.||+.|+.+| ..|||++++.+. ..+...........++|+|+.+|.... .+..
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~---~~~~- 77 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEE---KPTL- 77 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCC---CCcc-
Confidence 357999999999999999999999999998 999999998765 333333322111123599999983211 1110
Q ss_pred CCCCCCCCcCcHHHHHHHHHHh----hHHHHHHHHhcC--CC-CeEEEEeC----------CCCcccEEEechhHHHHHH
Q 038151 84 ENWDMLPSITLVPKFFSAVEML----QLPLENLFREIQ--PK-PSCLISDI----------KFNVPRIVFHGFSGFCLSC 146 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~--~~-pd~vv~D~----------~lgiP~v~~~~~~~~~~~~ 146 (439)
... . +....+....... .+.+.+++++.. .+ ++|||+|. ++|||++.|++++++.++.
T Consensus 78 ~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~ 152 (468)
T PLN02207 78 GGT---Q--SVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAM 152 (468)
T ss_pred ccc---c--CHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHH
Confidence 010 0 1122232333233 556666666421 13 49999999 9999999999999988887
Q ss_pred HhhhhccC-------------CcCCCCC-CCccccCcccCCccccc---ccchHHHHHhhccccEEEEcCccccCHHHHH
Q 038151 147 LHSLSVSK-------------VHEMPGL-PDQVEITKDQLPEILKK---KSFGAPVLAAEMASYGVIVNSFEELEPAYVE 209 (439)
Q Consensus 147 ~~~~~~~~-------------~~~~pg~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 209 (439)
+++.+... ...+||+ ++ ++..++|.++.. ...+.+....+..++++++|||.+||+++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~ 229 (468)
T PLN02207 153 MQYLADRHSKDTSVFVRNSEEMLSIPGFVNP---VPANVLPSALFVEDGYDAYVKLAILFTKANGILVNSSFDIEPYSVN 229 (468)
T ss_pred HHHhhhccccccccCcCCCCCeEECCCCCCC---CChHHCcchhcCCccHHHHHHHHHhcccCCEEEEEchHHHhHHHHH
Confidence 76653211 0126777 33 677778765532 2223334445677889999999999999999
Q ss_pred HHHH-hcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCC
Q 038151 210 EYKK-ARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATK 269 (439)
Q Consensus 210 ~~~~-~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~ 269 (439)
.++. ...++++.|||++.......+ .... ..+.+|.+|||+++++||||| ++.++
T Consensus 230 ~~~~~~~~p~v~~VGPl~~~~~~~~~----~~~~-~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~ 304 (468)
T PLN02207 230 HFLDEQNYPSVYAVGPIFDLKAQPHP----EQDL-ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQ 304 (468)
T ss_pred HHHhccCCCcEEEecCCcccccCCCC----cccc-chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCC
Confidence 8865 234789999999754321110 0000 123579999999998999999 77889
Q ss_pred CceEEEEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEecccccc
Q 038151 270 KPFIWVVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFA 349 (439)
Q Consensus 270 ~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~ 349 (439)
++|||+++..... ..++ +|++|.++..+.+ .+.+|+||.++|+|+++++|||||||||++||+++|||+++||+++
T Consensus 305 ~~flW~~r~~~~~--~~~~-lp~~f~er~~~~g-~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~ 380 (468)
T PLN02207 305 YRFLWSLRTEEVT--NDDL-LPEGFLDRVSGRG-MICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYA 380 (468)
T ss_pred CcEEEEEeCCCcc--cccc-CCHHHHhhcCCCe-EEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccc
Confidence 9999999853210 1122 8889988876555 5669999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Q 038151 350 DQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKL 429 (439)
Q Consensus 350 DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~ 429 (439)
||+.||+++++++|+|+.+..+.....+..++.++|+++|+++|+ +++++||+||++|++.+++++++||||++++++
T Consensus 381 DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~--~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~ 458 (468)
T PLN02207 381 EQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN--KDNNVVRKRVMDISQMIQRATKNGGSSFAAIEK 458 (468)
T ss_pred cchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh--cchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 999999988666999998842210000013699999999999996 247799999999999999999999999999999
Q ss_pred HHHHHHHh
Q 038151 430 LIQDIMQR 437 (439)
Q Consensus 430 ~~~~~~~~ 437 (439)
|++++...
T Consensus 459 ~v~~~~~~ 466 (468)
T PLN02207 459 FIHDVIGI 466 (468)
T ss_pred HHHHHHhc
Confidence 99998753
No 16
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2.8e-57 Score=451.64 Aligned_cols=383 Identities=25% Similarity=0.434 Sum_probs=293.3
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENW 86 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~ 86 (439)
.+.|||++|+|++||++||+.||+.|+.+|++|||++++.+...+.+.... ..+|+++.+|. +++++.
T Consensus 5 ~~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~----~~~i~~v~lp~-----g~~~~~--- 72 (448)
T PLN02562 5 QRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDP----KLGITFMSISD-----GQDDDP--- 72 (448)
T ss_pred CCcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCC----CCCEEEEECCC-----CCCCCc---
Confidence 467999999999999999999999999999999999999876655543221 13599988763 343211
Q ss_pred CCCCCcCcHHHHHHHHH-HhhHHHHHHHHhcC--CCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhcc
Q 038151 87 DMLPSITLVPKFFSAVE-MLQLPLENLFREIQ--PKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVS 153 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~--~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~ 153 (439)
+ .+ +..+...+. .+...+++++++.. .+++|||+|. ++|||++.|+++++..++.+.+.+..
T Consensus 73 ---~-~~-~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~ 147 (448)
T PLN02562 73 ---P-RD-FFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPEL 147 (448)
T ss_pred ---c-cc-HHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHH
Confidence 1 12 223444554 57788888887632 2358999999 99999999999998887776544310
Q ss_pred --------C-------Cc-CCCCCCCccccCcccCCccccc-------ccchHHHHHhhccccEEEEcCccccCHHHHHH
Q 038151 154 --------K-------VH-EMPGLPDQVEITKDQLPEILKK-------KSFGAPVLAAEMASYGVIVNSFEELEPAYVEE 210 (439)
Q Consensus 154 --------~-------~~-~~pg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~ 210 (439)
. +. .+||+|. ++..++|.++.. ...+.+..+....++++++|||.+||+.+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~Pg~~~---l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~ 224 (448)
T PLN02562 148 VRTGLISETGCPRQLEKICVLPEQPL---LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKN 224 (448)
T ss_pred hhccccccccccccccccccCCCCCC---CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHH
Confidence 0 01 2567664 666777765421 22233344556678899999999999998887
Q ss_pred HHHh----cCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE--------------------ec
Q 038151 211 YKKA----RGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA--------------------LE 266 (439)
Q Consensus 211 ~~~~----~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv--------------------l~ 266 (439)
.... ..++++.|||+........ +....+..+.+|.+|||+++++||||| ++
T Consensus 225 ~~~~~~~~~~~~v~~iGpl~~~~~~~~----~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~ 300 (448)
T PLN02562 225 HQASYNNGQNPQILQIGPLHNQEATTI----TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALE 300 (448)
T ss_pred HHhhhccccCCCEEEecCccccccccc----CCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHH
Confidence 6532 3478999999975432100 011111234568899999998999999 66
Q ss_pred cCCCceEEEEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccc
Q 038151 267 ATKKPFIWVVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWP 346 (439)
Q Consensus 267 ~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P 346 (439)
..+++|||+++..... . +|++|.++.. +|+.+.+|+||..||+|+++++|||||||||++||+++|||+|++|
T Consensus 301 ~~g~~fiW~~~~~~~~----~--l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P 373 (448)
T PLN02562 301 ASGRPFIWVLNPVWRE----G--LPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYP 373 (448)
T ss_pred HCCCCEEEEEcCCchh----h--CCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCC
Confidence 7899999999763211 1 7888877765 4667779999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHH
Q 038151 347 FFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLN 426 (439)
Q Consensus 347 ~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~ 426 (439)
+++||+.||+++++.+|+|+.+. + +++++|+++|+++|+++ +||+||++++++++++ ++||||+++
T Consensus 374 ~~~DQ~~na~~~~~~~g~g~~~~-~--------~~~~~l~~~v~~~l~~~----~~r~~a~~l~~~~~~~-~~gGSS~~n 439 (448)
T PLN02562 374 VAGDQFVNCAYIVDVWKIGVRIS-G--------FGQKEVEEGLRKVMEDS----GMGERLMKLRERAMGE-EARLRSMMN 439 (448)
T ss_pred cccchHHHHHHHHHHhCceeEeC-C--------CCHHHHHHHHHHHhCCH----HHHHHHHHHHHHHHhc-CCCCCHHHH
Confidence 99999999999965589998883 2 89999999999999865 8999999999999987 778999999
Q ss_pred HHHHHHHH
Q 038151 427 IKLLIQDI 434 (439)
Q Consensus 427 ~~~~~~~~ 434 (439)
+++|++++
T Consensus 440 l~~~v~~~ 447 (448)
T PLN02562 440 FTTLKDEL 447 (448)
T ss_pred HHHHHHHh
Confidence 99999986
No 17
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=9.2e-58 Score=452.21 Aligned_cols=391 Identities=27% Similarity=0.469 Sum_probs=292.2
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEE--EeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQG--AFVTI--VTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGC 83 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~G--h~V~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 83 (439)
+-|||++|+|++||++||+.||++|+.+| +.|++ ++++.+...+...........++|+|+.+|++ .+...
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~-----~~~~~ 77 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAV-----TPYSS 77 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCC-----CCCCC
Confidence 56999999999999999999999999998 45555 54544332222211111112235999998753 22111
Q ss_pred CCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcC--CCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhh
Q 038151 84 ENWDMLPSITLVPKFFSAVEMLQLPLENLFREIQ--PKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLS 151 (439)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~ 151 (439)
.... .......+..........+++++++.. .+++|||+|. ++|||++.|++++++.++.+.+.+
T Consensus 78 ~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~ 154 (451)
T PLN03004 78 SSTS---RHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLP 154 (451)
T ss_pred cccc---ccCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHH
Confidence 1111 112222333444456677777777531 2459999999 999999999999999988887754
Q ss_pred ccC------------CcCCCCCCCccccCcccCCccccc-----ccchHHHHHhhccccEEEEcCccccCHHHHHHHHHh
Q 038151 152 VSK------------VHEMPGLPDQVEITKDQLPEILKK-----KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKA 214 (439)
Q Consensus 152 ~~~------------~~~~pg~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 214 (439)
... ...+||+|. ++..++|.++.. ...+......+..++++++|||.+||+.+++.++..
T Consensus 155 ~~~~~~~~~~~~~~~~v~iPg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~ 231 (451)
T PLN03004 155 TIDETTPGKNLKDIPTVHIPGVPP---MKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEE 231 (451)
T ss_pred hccccccccccccCCeecCCCCCC---CChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhc
Confidence 210 123677775 677788876542 223344445567788999999999999999999775
Q ss_pred cC-CceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEE
Q 038151 215 RG-GKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIW 274 (439)
Q Consensus 215 ~~-~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~ 274 (439)
+. ++++.|||++...... + .. . ..+.+|.+|||+++++||||| ++.++++|||
T Consensus 232 ~~~~~v~~vGPl~~~~~~~-~----~~-~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW 304 (451)
T PLN03004 232 LCFRNIYPIGPLIVNGRIE-D----RN-D-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLW 304 (451)
T ss_pred CCCCCEEEEeeeccCcccc-c----cc-c-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEE
Confidence 43 6899999997422100 0 00 1 123569999999999999999 7788999999
Q ss_pred EEeCCCc-c---hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccc
Q 038151 275 VVRAGDK-T---KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFAD 350 (439)
Q Consensus 275 ~~~~~~~-~---~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~D 350 (439)
+++.... . .....+ +|++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||+|++|++.|
T Consensus 305 ~~r~~~~~~~~~~~~~~~-lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~D 383 (451)
T PLN03004 305 VVRNPPELEKTELDLKSL-LPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAE 383 (451)
T ss_pred EEcCCccccccccchhhh-CChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecccccc
Confidence 9995311 0 011223 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHH
Q 038151 351 QFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSL 425 (439)
Q Consensus 351 Q~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~ 425 (439)
|+.||+++++++|+|+.++.++.+ .+++++|+++|+++|+++ +||+||++++++.++++++||||++
T Consensus 384 Q~~na~~~~~~~g~g~~l~~~~~~----~~~~e~l~~av~~vm~~~----~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 384 QRFNRVMIVDEIKIAISMNESETG----FVSSTEVEKRVQEIIGEC----PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred chhhHHHHHHHhCceEEecCCcCC----ccCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999996568999999753211 379999999999999865 8999999999999999999999975
No 18
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=3.6e-57 Score=448.46 Aligned_cols=402 Identities=27% Similarity=0.457 Sum_probs=295.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAK-QGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENW 86 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~-~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~ 86 (439)
+.||+|+|+|++||++||+.||+.|+. +|+.|||++++.+.. +...... ...++++|+.++ +|++++....
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~--~~~~~~~-~~~~~i~~~~i~-----dglp~g~~~~ 74 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIH--RSMIPNH-NNVENLSFLTFS-----DGFDDGVISN 74 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhh--hhhhccC-CCCCCEEEEEcC-----CCCCCccccc
Confidence 469999999999999999999999996 699999999985421 1111111 112358998885 3777653221
Q ss_pred CCCCCcCcHHHHHHHHHHhhHHHHHHHHhcC---CCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhcc
Q 038151 87 DMLPSITLVPKFFSAVEMLQLPLENLFREIQ---PKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVS 153 (439)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~ 153 (439)
.. .....+......+.+.+++++++.. .+++|||+|. ++|||++.|++++++..+.+++....
T Consensus 75 ~~----~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 150 (455)
T PLN02152 75 TD----DVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG 150 (455)
T ss_pred cc----cHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc
Confidence 11 2223344444456677777776531 3459999999 99999999999999998888766432
Q ss_pred C--CcCCCCCCCccccCcccCCccccc---c----cchHHHHHhhcc--ccEEEEcCccccCHHHHHHHHHhcCCceEec
Q 038151 154 K--VHEMPGLPDQVEITKDQLPEILKK---K----SFGAPVLAAEMA--SYGVIVNSFEELEPAYVEEYKKARGGKVWCV 222 (439)
Q Consensus 154 ~--~~~~pg~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~--~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~v 222 (439)
. ...+||+|. ++..++|.++.. . ..+.+..+.+.. ++++++|||.+||+.+++.++. .+++.|
T Consensus 151 ~~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~V 224 (455)
T PLN02152 151 NNSVFEFPNLPS---LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAV 224 (455)
T ss_pred CCCeeecCCCCC---CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEE
Confidence 2 234888875 677788876542 1 222233333332 4689999999999999998854 369999
Q ss_pred CcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEEeCCCcc-
Q 038151 223 GPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVVRAGDKT- 282 (439)
Q Consensus 223 Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~~~~~~~- 282 (439)
||+++...............+..+.+|.+|||++++++|||| ++.++++|||+++.....
T Consensus 225 GPL~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~ 304 (455)
T PLN02152 225 GPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNRE 304 (455)
T ss_pred cccCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccc
Confidence 999753210000000000011223579999999998999999 778899999999863110
Q ss_pred ----hh-hhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHH
Q 038151 283 ----KE-LEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKL 357 (439)
Q Consensus 283 ----~~-~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~r 357 (439)
.. .....+|++|.++.+..+ .|.+|+||.+||+|+++++|||||||||++||+++|||++++|+++||+.||++
T Consensus 305 ~~~~~~~~~~~~~~~~f~e~~~~~g-~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~ 383 (455)
T PLN02152 305 AKIEGEEETEIEKIAGFRHELEEVG-MIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKL 383 (455)
T ss_pred cccccccccccccchhHHHhccCCe-EEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHH
Confidence 00 001014678887776554 666999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q 038151 358 VVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDI 434 (439)
Q Consensus 358 v~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~ 434 (439)
+++.+|+|+.+..+..+ .+++++|+++|+++|++ ++++||+||++|++.+++++++||||++++++|+++|
T Consensus 384 ~~~~~~~G~~~~~~~~~----~~~~e~l~~av~~vm~~--~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 384 LEEIWKTGVRVRENSEG----LVERGEIRRCLEAVMEE--KSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHhCceEEeecCcCC----cCcHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 97667888887543211 36999999999999963 4668999999999999999999999999999999876
No 19
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=4.6e-57 Score=453.31 Aligned_cols=396 Identities=29% Similarity=0.451 Sum_probs=297.8
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCE 84 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 84 (439)
.++||+|+|+|++||++||+.||++|+.+ ||+|||++++.+...++.... ..+++|+.+|. +++++..
T Consensus 9 ~~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~-----~~gi~fv~lp~-----~~p~~~~ 78 (459)
T PLN02448 9 TSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK-----PDNIRFATIPN-----VIPSELV 78 (459)
T ss_pred CCcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC-----CCCEEEEECCC-----CCCCccc
Confidence 68999999999999999999999999999 999999999988776655421 23699988873 4444322
Q ss_pred CCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhccC
Q 038151 85 NWDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVSK 154 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~~ 154 (439)
.. .+....+......+...+++++++...++||||+|. ++|||++.+++.++..++.+.+.....
T Consensus 79 ~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~ 153 (459)
T PLN02448 79 RA-----ADFPGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLP 153 (459)
T ss_pred cc-----cCHHHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhh
Confidence 11 122222222233567778888876434689999998 899999999999997777665553210
Q ss_pred -----C----------c-CCCCCCCccccCcccCCccccc-----ccchHHHHHhhccccEEEEcCccccCHHHHHHHHH
Q 038151 155 -----V----------H-EMPGLPDQVEITKDQLPEILKK-----KSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKK 213 (439)
Q Consensus 155 -----~----------~-~~pg~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~ 213 (439)
+ . .+||++. ++..+++.++.. .+.+.........++++++|||.+||+.++++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~iPg~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~ 230 (459)
T PLN02448 154 QNGHFPVELSESGEERVDYIPGLSS---TRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKS 230 (459)
T ss_pred hccCCCCccccccCCccccCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHh
Confidence 0 0 1555543 555666654432 11223333445667899999999999999999987
Q ss_pred hcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEE
Q 038151 214 ARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIW 274 (439)
Q Consensus 214 ~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~ 274 (439)
.++.+++.|||+++........ . .......+.+|.+||+.+++++|||| ++..+.+|||
T Consensus 231 ~~~~~~~~iGP~~~~~~~~~~~-~-~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw 308 (459)
T PLN02448 231 KFPFPVYPIGPSIPYMELKDNS-S-SSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLW 308 (459)
T ss_pred hcCCceEEecCcccccccCCCc-c-ccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEE
Confidence 7767899999997542110000 0 00000012478999999988999999 7788999999
Q ss_pred EEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhh
Q 038151 275 VVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCN 354 (439)
Q Consensus 275 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~n 354 (439)
+++... .++.++. ..|..+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|
T Consensus 309 ~~~~~~-----------~~~~~~~-~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~n 376 (459)
T PLN02448 309 VARGEA-----------SRLKEIC-GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLN 376 (459)
T ss_pred EEcCch-----------hhHhHhc-cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhh
Confidence 876421 1232322 2467778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCC-CccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 038151 355 EKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEG-GEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQD 433 (439)
Q Consensus 355 a~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~ 433 (439)
|+++++.+|+|+.+...... ...+++++|+++|+++|.++ +++++||+||++|++.+++++.+||||++++++|+++
T Consensus 377 a~~v~~~~g~G~~~~~~~~~--~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~ 454 (459)
T PLN02448 377 SKLIVEDWKIGWRVKREVGE--ETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRD 454 (459)
T ss_pred HHHHHHHhCceEEEeccccc--CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99997558999998632110 01479999999999999864 7899999999999999999999999999999999999
Q ss_pred HHH
Q 038151 434 IMQ 436 (439)
Q Consensus 434 ~~~ 436 (439)
|+.
T Consensus 455 ~~~ 457 (459)
T PLN02448 455 ISQ 457 (459)
T ss_pred Hhc
Confidence 874
No 20
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.7e-56 Score=447.72 Aligned_cols=411 Identities=29% Similarity=0.461 Sum_probs=290.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCC---eEEEEeCCCCch-hhhhhhhhcccCCCCeEEEEeeCCCccCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGA---FVTIVTTPKNAA-RFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEG 82 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh---~V~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 82 (439)
++.||+|+|+|++||++||+.||+.|+.+|. .||+.++..+.. ..+..+.......++|+|+.+|++. .+++
T Consensus 2 ~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~----~p~~ 77 (475)
T PLN02167 2 KEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQ----DPPP 77 (475)
T ss_pred CccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCC----CCcc
Confidence 4679999999999999999999999999984 567776543322 1122221111122359999988642 1211
Q ss_pred CCCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhc-------CC-CCeEEEEeC----------CCCcccEEEechhHHHH
Q 038151 83 CENWDMLPSITLVPKFFSAVEMLQLPLENLFREI-------QP-KPSCLISDI----------KFNVPRIVFHGFSGFCL 144 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~-~pd~vv~D~----------~lgiP~v~~~~~~~~~~ 144 (439)
.+.... .....+......+...+++.+++. +. +++|||+|. ++|||++.|++++++.+
T Consensus 78 ~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~ 153 (475)
T PLN02167 78 MELFVK----ASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFL 153 (475)
T ss_pred cccccc----chHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHH
Confidence 110000 001122222233333344433321 11 459999999 99999999999999888
Q ss_pred HHHhhhhcc----C----------CcCCCCCCCccccCcccCCccccc---ccchHHHHHhhccccEEEEcCccccCHHH
Q 038151 145 SCLHSLSVS----K----------VHEMPGLPDQVEITKDQLPEILKK---KSFGAPVLAAEMASYGVIVNSFEELEPAY 207 (439)
Q Consensus 145 ~~~~~~~~~----~----------~~~~pg~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~l~~~~ 207 (439)
+.+++.+.. . +..+||++++ ++..++|.++.. ...+....+....++++++|||.+||+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~ 231 (475)
T PLN02167 154 GMMKYLPERHRKTASEFDLSSGEEELPIPGFVNS--VPTKVLPPGLFMKESYEAWVEIAERFPEAKGILVNSFTELEPNA 231 (475)
T ss_pred HHHHHHHHhccccccccccCCCCCeeECCCCCCC--CChhhCchhhhCcchHHHHHHHHHhhcccCEeeeccHHHHHHHH
Confidence 877655321 0 0226777421 455666653321 22233444556778899999999999999
Q ss_pred HHHHHHhc--CCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------ec
Q 038151 208 VEEYKKAR--GGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LE 266 (439)
Q Consensus 208 ~~~~~~~~--~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~ 266 (439)
+++++... -+++++|||++....... .. ....++.+|.+|||.++++||||| ++
T Consensus 232 ~~~l~~~~~~~p~v~~vGpl~~~~~~~~----~~-~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~ 306 (475)
T PLN02167 232 FDYFSRLPENYPPVYPVGPILSLKDRTS----PN-LDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALE 306 (475)
T ss_pred HHHHHhhcccCCeeEEeccccccccccC----CC-CCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHH
Confidence 99986642 168999999976422100 00 001123579999999998999999 77
Q ss_pred cCCCceEEEEeCCCcc-hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEecc
Q 038151 267 ATKKPFIWVVRAGDKT-KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTW 345 (439)
Q Consensus 267 ~~~~~~v~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~ 345 (439)
.++++|||+++..... ...... +|++|.+++.+.+. +.+|+||..||+|+++++|||||||||++||+++|||||+|
T Consensus 307 ~~~~~flw~~~~~~~~~~~~~~~-lp~~~~er~~~rg~-v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~ 384 (475)
T PLN02167 307 LVGCRFLWSIRTNPAEYASPYEP-LPEGFMDRVMGRGL-VCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATW 384 (475)
T ss_pred hCCCcEEEEEecCcccccchhhh-CChHHHHHhccCee-eeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEec
Confidence 8899999999853211 111112 88899988877764 55999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHH
Q 038151 346 PFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSL 425 (439)
Q Consensus 346 P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~ 425 (439)
|+++||+.||+++++++|+|+.++.......+..+++++|+++|+++|.++ ++||+||+++++++++++++||||++
T Consensus 385 P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~---~~~r~~a~~~~~~~~~av~~gGsS~~ 461 (475)
T PLN02167 385 PMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE---DVPRKKVKEIAEAARKAVMDGGSSFV 461 (475)
T ss_pred cccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 999999999987447999999986421000001479999999999999753 38999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 038151 426 NIKLLIQDIMQR 437 (439)
Q Consensus 426 ~~~~~~~~~~~~ 437 (439)
++++|+++|.+.
T Consensus 462 ~l~~~v~~i~~~ 473 (475)
T PLN02167 462 AVKRFIDDLLGD 473 (475)
T ss_pred HHHHHHHHHHhc
Confidence 999999999874
No 21
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.5e-56 Score=446.64 Aligned_cols=405 Identities=27% Similarity=0.434 Sum_probs=293.0
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCchhh---hhhhhhccc-CCCCeEEEEeeCCCccCCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQG--AFVTIVTTPKNAARF---QNVIERGIQ-SGLPIQVIEFRFPCQEVGLPE 81 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~G--h~V~~~~~~~~~~~~---~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~ 81 (439)
|+||||+|+|++||++||+.||+.|+.+| ..|||++++.+...+ ......... ..++|+++.+|++ .++
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~-----~~~ 76 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAG-----DQP 76 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCC-----CCC
Confidence 68999999999999999999999999998 889999998775432 111111111 1235999998753 221
Q ss_pred CCCCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhc---CCC-CeEEEEeC----------CCCcccEEEechhHHHHHHH
Q 038151 82 GCENWDMLPSITLVPKFFSAVEMLQLPLENLFREI---QPK-PSCLISDI----------KFNVPRIVFHGFSGFCLSCL 147 (439)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~-pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~ 147 (439)
.. . .......+......+.+.+++++.+. ..+ .+|||+|. ++|||++.|++++++..+.+
T Consensus 77 ~~-~-----~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~ 150 (481)
T PLN02554 77 TT-E-----DPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQ 150 (481)
T ss_pred cc-c-----chHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHH
Confidence 10 0 11111212222334555666665431 113 38999999 99999999999999999888
Q ss_pred hhhhccC--------C-------cCCCCCCCccccCcccCCccccc---ccchHHHHHhhccccEEEEcCccccCHHHHH
Q 038151 148 HSLSVSK--------V-------HEMPGLPDQVEITKDQLPEILKK---KSFGAPVLAAEMASYGVIVNSFEELEPAYVE 209 (439)
Q Consensus 148 ~~~~~~~--------~-------~~~pg~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 209 (439)
++++... . ..+||++. .++..++|.++.. ...+.+....+..++++++|||.+||+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~--pl~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~ 228 (481)
T PLN02554 151 LHVQMLYDEKKYDVSELEDSEVELDVPSLTR--PYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALK 228 (481)
T ss_pred HhhhhhccccccCccccCCCCceeECCCCCC--CCCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEechHHHhHHHHH
Confidence 7764211 0 12666632 1566677754432 2233344455678899999999999999988
Q ss_pred HHHHh--cCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccC
Q 038151 210 EYKKA--RGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEAT 268 (439)
Q Consensus 210 ~~~~~--~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~ 268 (439)
.+... ..++++.|||++...+... .. ....+.+|.+|||++++++|||| ++.+
T Consensus 229 ~l~~~~~~~~~v~~vGpl~~~~~~~~-----~~-~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~ 302 (481)
T PLN02554 229 FFSGSSGDLPPVYPVGPVLHLENSGD-----DS-KDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERS 302 (481)
T ss_pred HHHhcccCCCCEEEeCCCcccccccc-----cc-ccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHc
Confidence 88753 2368999999953221110 00 01133579999999988999999 7788
Q ss_pred CCceEEEEeCCCc---------chhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcC
Q 038151 269 KKPFIWVVRAGDK---------TKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNG 339 (439)
Q Consensus 269 ~~~~v~~~~~~~~---------~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~G 339 (439)
+++|||+++.... .....++ +|++|.++..+.+ .+.+|+||.+||.|+++++|||||||||++||+++|
T Consensus 303 ~~~flW~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~r~~~~g-~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~G 380 (481)
T PLN02554 303 GHRFLWSLRRASPNIMKEPPGEFTNLEEI-LPEGFLDRTKDIG-KVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFG 380 (481)
T ss_pred CCCeEEEEcCCcccccccccccccchhhh-CChHHHHHhccCc-eEEeeCCHHHHhCCcccCcccccCccchHHHHHHcC
Confidence 9999999985311 0011122 6889988876655 556999999999999999999999999999999999
Q ss_pred CCEeccccccchhhhHHHHHHHhceeEEecccCCC----cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHH
Q 038151 340 LPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL----HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKR 415 (439)
Q Consensus 340 vP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~----~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~ 415 (439)
||||+||+++||+.||+++++++|+|+.++....+ +.+..+++++|+++|+++|++. ++||+||+++++.+++
T Consensus 381 VP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~---~~~r~~a~~l~~~~~~ 457 (481)
T PLN02554 381 VPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD---SDVRKRVKEMSEKCHV 457 (481)
T ss_pred CCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHH
Confidence 99999999999999995533799999998641100 0011489999999999999621 4899999999999999
Q ss_pred HHHcCCchHHHHHHHHHHHHH
Q 038151 416 AIEEGGSSSLNIKLLIQDIMQ 436 (439)
Q Consensus 416 ~~~~gG~~~~~~~~~~~~~~~ 436 (439)
++++||||++++++|+++|..
T Consensus 458 av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 458 ALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HhcCCChHHHHHHHHHHHHHh
Confidence 999999999999999999875
No 22
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=1.2e-36 Score=302.20 Aligned_cols=351 Identities=21% Similarity=0.229 Sum_probs=221.5
Q ss_pred ecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCCCCCcC
Q 038151 14 FPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDMLPSIT 93 (439)
Q Consensus 14 ~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 93 (439)
+.+|++||++|++.||++|+++||+|+|++++.+.+.+++. +++|..++.........+. ........
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~---------G~~~~~~~~~~~~~~~~~~---~~~~~~~~ 68 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA---------GAEFVLYGSALPPPDNPPE---NTEEEPID 68 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc---------CCEEEecCCcCcccccccc---ccCcchHH
Confidence 46899999999999999999999999999999888877776 6888877532111001100 00000011
Q ss_pred cHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhccCCcCCCCCCC
Q 038151 94 LVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVSKVHEMPGLPD 163 (439)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ 163 (439)
....+......+...+..++++ .+||+||+|. .+|||++.+++..... .. +++. .+....
T Consensus 69 ~~~~~~~~~~~~~~~l~~~~~~--~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~--~~-~~~~-----~~~~~~ 138 (392)
T TIGR01426 69 IIEKLLDEAEDVLPQLEEAYKG--DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN--EE-FEEM-----VSPAGE 138 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc--cc-cccc-----ccccch
Confidence 1111222222333444555555 7999999998 8999999885433211 00 0000 000000
Q ss_pred ccccCccc-CCccccc-ccchHHHHHhhc----cccEEEE-cC--ccccCHHHHHHHHHhcCCceEecCcccccCCCchh
Q 038151 164 QVEITKDQ-LPEILKK-KSFGAPVLAAEM----ASYGVIV-NS--FEELEPAYVEEYKKARGGKVWCVGPVSFFNKEDID 234 (439)
Q Consensus 164 ~~~~~~~~-~~~~~~~-~~~~~~~~~~~~----~~~~~~~-~s--~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~ 234 (439)
.. +.... .+..... ...++.....+. ....... .. .....++++.+....++++++++||+...+.
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~---- 213 (392)
T TIGR01426 139 GS-AEEGAIAERGLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRK---- 213 (392)
T ss_pred hh-hhhhccccchhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCCCcc----
Confidence 00 00000 0000000 000111111110 0000000 00 1123445555556678899999999865421
Q ss_pred hhhcCCCCCCCcccccccccCCCCCcEEEE-------------------eccCCCceEEEEeCCCcchhhhhhhchhhHH
Q 038151 235 KVERGNKASIDCSGCLKWLDSWEPSSVVYA-------------------LEATKKPFIWVVRAGDKTKELEEWLSEEKFE 295 (439)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-------------------l~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~ 295 (439)
+...|+.....+++||+ +...+.++++..+...... .+.
T Consensus 214 -------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~---------~~~ 271 (392)
T TIGR01426 214 -------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPA---------DLG 271 (392)
T ss_pred -------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChh---------Hhc
Confidence 12337666667789999 3455677788776543211 110
Q ss_pred HHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCc
Q 038151 296 ERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 296 ~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
..++|+.+.+|+|+.++|+++++ +|||||+||++||+++|+|+|++|...||+.||.++ +++|+|+.+...
T Consensus 272 --~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l-~~~g~g~~l~~~---- 342 (392)
T TIGR01426 272 --ELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRI-AELGLGRHLPPE---- 342 (392)
T ss_pred --cCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHH-HHCCCEEEeccc----
Confidence 12468999999999999999887 999999999999999999999999999999999999 699999998765
Q ss_pred ccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 038151 376 LADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQD 433 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~ 433 (439)
++++++|.++|+++|+|+ +|+++++++++.+++. +|. ....+.+.+.
T Consensus 343 ---~~~~~~l~~ai~~~l~~~----~~~~~~~~l~~~~~~~---~~~-~~aa~~i~~~ 389 (392)
T TIGR01426 343 ---EVTAEKLREAVLAVLSDP----RYAERLRKMRAEIREA---GGA-RRAADEIEGF 389 (392)
T ss_pred ---cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHc---CCH-HHHHHHHHHh
Confidence 589999999999999987 8999999999999865 544 4444444443
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=7.5e-36 Score=301.97 Aligned_cols=354 Identities=17% Similarity=0.187 Sum_probs=225.4
Q ss_pred CcEEEEe-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCcc--CCCCC-CC
Q 038151 8 QLHFVLF-PFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQE--VGLPE-GC 83 (439)
Q Consensus 8 ~~~il~~-~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~l~~-~~ 83 (439)
..||+.+ |.++.+|..-+-.|+++|++|||+||++++.... ..... ...+++.+.++..... ..... ..
T Consensus 20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~-~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~ 92 (507)
T PHA03392 20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRV-YYASH------LCGNITEIDASLSVEYFKKLVKSSAV 92 (507)
T ss_pred cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccC------CCCCEEEEEcCCChHHHHHHHhhhhH
Confidence 4468866 7799999999999999999999999999765211 01000 1124555544311000 00000 00
Q ss_pred -CCCCCCCC-cCc----HHHHHHHHH--HhhHHHHHHHHhcCCCCeEEEEeC----------CC-CcccEEEechhHHHH
Q 038151 84 -ENWDMLPS-ITL----VPKFFSAVE--MLQLPLENLFREIQPKPSCLISDI----------KF-NVPRIVFHGFSGFCL 144 (439)
Q Consensus 84 -~~~~~~~~-~~~----~~~~~~~~~--~~~~~l~~~~~~~~~~pd~vv~D~----------~l-giP~v~~~~~~~~~~ 144 (439)
........ ... ...+...+. -....+.+++++...++|++|+|. .+ ++|.|..++......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~ 172 (507)
T PHA03392 93 FRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAE 172 (507)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchh
Confidence 00000000 000 001011111 113445666651116799999998 68 999877755433221
Q ss_pred HH-Hhh-hhccCCcCCCCCCCccccCcccCCccccc--------------cc-------chHH--------HHHhhcccc
Q 038151 145 SC-LHS-LSVSKVHEMPGLPDQVEITKDQLPEILKK--------------KS-------FGAP--------VLAAEMASY 193 (439)
Q Consensus 145 ~~-~~~-~~~~~~~~~pg~~~~~~~~~~~~~~~~~~--------------~~-------~~~~--------~~~~~~~~~ 193 (439)
.. ... .+. ++..+|.+. ....+-..++++ .. +.+. ..+.....+
T Consensus 173 ~~~~~gg~p~-~~syvP~~~----~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~ 247 (507)
T PHA03392 173 NFETMGAVSR-HPVYYPNLW----RSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQ 247 (507)
T ss_pred HHHhhccCCC-CCeeeCCcc----cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCc
Confidence 11 111 111 001122221 111122222222 00 0011 111222334
Q ss_pred EEEEcCccccCHHHHHHHHHhcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE---------
Q 038151 194 GVIVNSFEELEPAYVEEYKKARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA--------- 264 (439)
Q Consensus 194 ~~~~~s~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv--------- 264 (439)
.+++|+...++.+ +++++++.+||++..+.... ...+.++.+|+++++ +++||+
T Consensus 248 l~lvns~~~~d~~------rp~~p~v~~vGgi~~~~~~~----------~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~ 310 (507)
T PHA03392 248 LLFVNVHPVFDNN------RPVPPSVQYLGGLHLHKKPP----------QPLDDYLEEFLNNST-NGVVYVSFGSSIDTN 310 (507)
T ss_pred EEEEecCccccCC------CCCCCCeeeecccccCCCCC----------CCCCHHHHHHHhcCC-CcEEEEECCCCCcCC
Confidence 5678888877732 46789999999987632111 013467889998754 469999
Q ss_pred -------------eccCCCceEEEEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhh
Q 038151 265 -------------LEATKKPFIWVVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNS 331 (439)
Q Consensus 265 -------------l~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs 331 (439)
++..+.+|||+.+.... + ...++|+.+.+|+||.++|+|+++++||||||+||
T Consensus 311 ~~~~~~~~~~l~a~~~l~~~viw~~~~~~~---------~-----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s 376 (507)
T PHA03392 311 DMDNEFLQMLLRTFKKLPYNVLWKYDGEVE---------A-----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQS 376 (507)
T ss_pred CCCHHHHHHHHHHHHhCCCeEEEEECCCcC---------c-----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCccc
Confidence 55677899999875431 1 01256999999999999999999999999999999
Q ss_pred HHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q 038151 332 VLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGE 411 (439)
Q Consensus 332 ~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~ 411 (439)
+.||+++|||+|++|+++||+.||+|+ +++|+|+.++.. ++++++|+++|+++++|+ +|++||+++++
T Consensus 377 ~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~~-------~~t~~~l~~ai~~vl~~~----~y~~~a~~ls~ 444 (507)
T PHA03392 377 TDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDTV-------TVSAAQLVLAIVDVIENP----KYRKNLKELRH 444 (507)
T ss_pred HHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEeccC-------CcCHHHHHHHHHHHhCCH----HHHHHHHHHHH
Confidence 999999999999999999999999999 699999999876 599999999999999987 99999999999
Q ss_pred HHHHH
Q 038151 412 MAKRA 416 (439)
Q Consensus 412 ~~~~~ 416 (439)
.+++.
T Consensus 445 ~~~~~ 449 (507)
T PHA03392 445 LIRHQ 449 (507)
T ss_pred HHHhC
Confidence 99864
No 24
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=6.1e-37 Score=305.54 Aligned_cols=342 Identities=15% Similarity=0.116 Sum_probs=211.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDM 88 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~ 88 (439)
|||+|+++|+.||++|++.||++|+++||+|+|++++.+...++.. +++|..++.................
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~---------G~~~~~~~~~~~~~~~~~~~~~~~~ 71 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA---------GLEFVPVGGDPDELLASPERNAGLL 71 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHc---------CCceeeCCCCHHHHHhhhhhccccc
Confidence 6999999999999999999999999999999999999777766655 6888876531110000000000000
Q ss_pred CCC----cCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC----------CCCcccEEEechhHHHHHHHhhhhccC
Q 038151 89 LPS----ITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI----------KFNVPRIVFHGFSGFCLSCLHSLSVSK 154 (439)
Q Consensus 89 ~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~----------~lgiP~v~~~~~~~~~~~~~~~~~~~~ 154 (439)
... ......+......+.+.+.+.+++ ++||+||+|. ++|||++.+++.+....+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~-------- 141 (401)
T cd03784 72 LLGPGLLLGALRLLRREAEAMLDDLVAAARD--WGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSA-------- 141 (401)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcccc--------
Confidence 000 011111222223344444444444 7999999996 8999999997655322110
Q ss_pred CcCCCCCCCccccCcccCCccccc-------ccchHHHHHhhcccc--EEEEcCcc--ccCHHHHHHHHHhcCCceEecC
Q 038151 155 VHEMPGLPDQVEITKDQLPEILKK-------KSFGAPVLAAEMASY--GVIVNSFE--ELEPAYVEEYKKARGGKVWCVG 223 (439)
Q Consensus 155 ~~~~pg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~s~~--~l~~~~~~~~~~~~~~~v~~vG 223 (439)
.+++.............. ..........+.... ........ ....+++...+.+++.+..++|
T Consensus 142 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 215 (401)
T cd03784 142 ------FPPPLGRANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTG 215 (401)
T ss_pred ------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccccCcEeC
Confidence 000000000000000000 001111111111000 00000000 0112222233455667777775
Q ss_pred -cccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE--------------------eccCCCceEEEEeCCCcc
Q 038151 224 -PVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA--------------------LEATKKPFIWVVRAGDKT 282 (439)
Q Consensus 224 -p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv--------------------l~~~~~~~v~~~~~~~~~ 282 (439)
++..... . +..+.++..|++. .+++||| +...+.+++|+++.....
T Consensus 216 ~~~~~~~~-~----------~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~ 282 (401)
T cd03784 216 YGFRDVPY-N----------GPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLG 282 (401)
T ss_pred CCCCCCCC-C----------CCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCcccc
Confidence 3322211 1 0123567788876 4568888 334567888887754321
Q ss_pred hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHh
Q 038151 283 KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL 362 (439)
Q Consensus 283 ~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~ 362 (439)
. ...++|+.+.+|+||..+|+++++ ||||||+||++||+++|+|+|++|+..||+.||+++ +++
T Consensus 283 ~-------------~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~ 346 (401)
T cd03784 283 A-------------EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AEL 346 (401)
T ss_pred c-------------cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHC
Confidence 0 112469999999999999999888 999999999999999999999999999999999999 699
Q ss_pred ceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q 038151 363 RIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRA 416 (439)
Q Consensus 363 G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 416 (439)
|+|+.++.. .+++++|.++|++++++ .++++++++++.+++.
T Consensus 347 G~g~~l~~~-------~~~~~~l~~al~~~l~~-----~~~~~~~~~~~~~~~~ 388 (401)
T cd03784 347 GAGPALDPR-------ELTAERLAAALRRLLDP-----PSRRRAAALLRRIREE 388 (401)
T ss_pred CCCCCCCcc-------cCCHHHHHHHHHHHhCH-----HHHHHHHHHHHHHHhc
Confidence 999999776 58999999999999985 6777888888887654
No 25
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=283.84 Aligned_cols=352 Identities=19% Similarity=0.243 Sum_probs=212.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWD 87 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~ 87 (439)
+|||+++..|+.||++|.++||++|.++||+|+|++++.+.+.++++ ++.|..++.. + .........
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a---------g~~f~~~~~~--~--~~~~~~~~~ 67 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA---------GLAFVAYPIR--D--SELATEDGK 67 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh---------Ccceeecccc--C--Chhhhhhhh
Confidence 58999999999999999999999999999999999999999999888 5666655421 0 001110000
Q ss_pred CCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEechhHHHHHHHhhhhccCCcCC
Q 038151 88 MLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFHGFSGFCLSCLHSLSVSKVHEM 158 (439)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 158 (439)
......+.. ...........+.+++.+ ..||.++.|. ..++|++.............. ...
T Consensus 68 ~~~~~~~~~-~~~~~~~~~~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 137 (406)
T COG1819 68 FAGVKSFRR-LLQQFKKLIRELLELLRE--LEPDLVVDDARLSLGLAARLLGIPVVGINVAPYTPLPAAG-------LPL 137 (406)
T ss_pred hhccchhHH-HhhhhhhhhHHHHHHHHh--cchhhhhcchhhhhhhhhhhcccchhhhhhhhccCCcccc-------cCc
Confidence 000111111 223334445555566666 6999999887 344544443211111000000 000
Q ss_pred CCCCC--ccccCcccCCccccc----ccchHHHHHhhccccE--E-------EEcCccccCHHHHHHHH---HhcCCceE
Q 038151 159 PGLPD--QVEITKDQLPEILKK----KSFGAPVLAAEMASYG--V-------IVNSFEELEPAYVEEYK---KARGGKVW 220 (439)
Q Consensus 159 pg~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~-------~~~s~~~l~~~~~~~~~---~~~~~~v~ 220 (439)
+.... ..+.+...++..... .... ......+.... . +..+...+...+.+... ..+|....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 216 (406)
T COG1819 138 PPVGIAGKLPIPLYPLPPRLVRPLIFARSW-LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGP 216 (406)
T ss_pred ccccccccccccccccChhhccccccchhh-hhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcC
Confidence 00000 000111111110000 0000 00000000000 0 00111111111111000 11223344
Q ss_pred ecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE------------------eccCCCceEEEEeCCCcc
Q 038151 221 CVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA------------------LEATKKPFIWVVRAGDKT 282 (439)
Q Consensus 221 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv------------------l~~~~~~~v~~~~~~~~~ 282 (439)
++||+... ...+...|+.. .+++||+ +...+.++|+.++... .
T Consensus 217 ~~~~~~~~----------------~~~~~~~~~~~--d~~~vyvslGt~~~~~~l~~~~~~a~~~l~~~vi~~~~~~~-~ 277 (406)
T COG1819 217 YIGPLLGE----------------AANELPYWIPA--DRPIVYVSLGTVGNAVELLAIVLEALADLDVRVIVSLGGAR-D 277 (406)
T ss_pred cccccccc----------------ccccCcchhcC--CCCeEEEEcCCcccHHHHHHHHHHHHhcCCcEEEEeccccc-c
Confidence 55554322 22344455433 4569999 5567788888876521 1
Q ss_pred hhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHh
Q 038151 283 KELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL 362 (439)
Q Consensus 283 ~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~ 362 (439)
.... + +.|+.+.+|+||.++++++++ ||||||+|||+|||++|||+|++|...||+.||.|+ +++
T Consensus 278 -~~~~--~---------p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~ 342 (406)
T COG1819 278 -TLVN--V---------PDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EEL 342 (406)
T ss_pred -cccc--C---------CCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHc
Confidence 1111 2 469999999999999999999 999999999999999999999999999999999999 799
Q ss_pred ceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 038151 363 RIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQD 433 (439)
Q Consensus 363 G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~ 433 (439)
|+|+.++.+ .++++.|+++|+++|+|+ +|+++++++++.++++ +|. ..+.+.+.+
T Consensus 343 G~G~~l~~~-------~l~~~~l~~av~~vL~~~----~~~~~~~~~~~~~~~~---~g~--~~~a~~le~ 397 (406)
T COG1819 343 GAGIALPFE-------ELTEERLRAAVNEVLADD----SYRRAAERLAEEFKEE---DGP--AKAADLLEE 397 (406)
T ss_pred CCceecCcc-------cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHhhhc---ccH--HHHHHHHHH
Confidence 999999986 599999999999999987 9999999999999988 773 333344433
No 26
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=6.7e-35 Score=298.90 Aligned_cols=163 Identities=28% Similarity=0.433 Sum_probs=129.7
Q ss_pred cCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCCcEEEE--------------------eccCCCceEE
Q 038151 215 RGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPSSVVYA--------------------LEATKKPFIW 274 (439)
Q Consensus 215 ~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv--------------------l~~~~~~~v~ 274 (439)
..+++.+||++....++. .+.++..|++....+++||+ ++..+++|||
T Consensus 244 ~~p~v~~vGgl~~~~~~~------------l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW 311 (500)
T PF00201_consen 244 LLPNVVEVGGLHIKPAKP------------LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIW 311 (500)
T ss_dssp HHCTSTTGCGC-S----T------------CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEE
T ss_pred hhhcccccCccccccccc------------cccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccc
Confidence 347899999986554333 23678889988567789999 7788899999
Q ss_pred EEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhh
Q 038151 275 VVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCN 354 (439)
Q Consensus 275 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~n 354 (439)
++.... +..+ +.|+.+.+|+||.+||.|+++++||||||+||+.||+++|||+|++|+++||+.|
T Consensus 312 ~~~~~~----------~~~l-----~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~n 376 (500)
T PF00201_consen 312 KYEGEP----------PENL-----PKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRN 376 (500)
T ss_dssp EETCSH----------GCHH-----HTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHH
T ss_pred cccccc----------cccc-----cceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCcc
Confidence 997631 1122 3599999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q 038151 355 EKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRA 416 (439)
Q Consensus 355 a~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 416 (439)
|.++ ++.|+|+.++.. ++|.++|.++|+++|+|+ +|++||++++..+++.
T Consensus 377 a~~~-~~~G~g~~l~~~-------~~~~~~l~~ai~~vl~~~----~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 377 AARV-EEKGVGVVLDKN-------DLTEEELRAAIREVLENP----SYKENAKRLSSLFRDR 426 (500)
T ss_dssp HHHH-HHTTSEEEEGGG-------C-SHHHHHHHHHHHHHSH----HHHHHHHHHHHTTT--
T ss_pred ceEE-EEEeeEEEEEec-------CCcHHHHHHHHHHHHhhh----HHHHHHHHHHHHHhcC
Confidence 9999 699999999977 699999999999999987 8999999999998854
No 27
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=4.9e-33 Score=285.04 Aligned_cols=364 Identities=31% Similarity=0.435 Sum_probs=214.7
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEE---EEeeCCCccCCCCCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQV---IEFRFPCQEVGLPEGCE 84 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~l~~~~~ 84 (439)
+.+++++++|++||++|++.||++|+++||+||++++.......... .. ...+.. ...++....++++....
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKS-SK----SKSIKKINPPPFEFLTIPDGLPEGWE 79 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCc-cc----ceeeeeeecChHHhhhhhhhhccchH
Confidence 46899999999999999999999999999999999887554433221 00 001111 11111100112222221
Q ss_pred CCCCCCCcCcHHHHHHHHHHh-hHHHHHHHHhcCCCCeEEEEeC----------CC-CcccEEEechhHHHHHHHhhhhc
Q 038151 85 NWDMLPSITLVPKFFSAVEML-QLPLENLFREIQPKPSCLISDI----------KF-NVPRIVFHGFSGFCLSCLHSLSV 152 (439)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~pd~vv~D~----------~l-giP~v~~~~~~~~~~~~~~~~~~ 152 (439)
... .........+....... ......+......++|++|+|. .. +++...+.+.++.......+.+.
T Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~ 158 (496)
T KOG1192|consen 80 DDD-LDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL 158 (496)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc
Confidence 100 00000011222222222 2223333222123499999999 22 36666666666555444333222
Q ss_pred cCCcCCCCCCCccccCcccCCccccc---------ccchH---------HHH-Hhh-------ccccEEEEcC-ccccCH
Q 038151 153 SKVHEMPGLPDQVEITKDQLPEILKK---------KSFGA---------PVL-AAE-------MASYGVIVNS-FEELEP 205 (439)
Q Consensus 153 ~~~~~~pg~~~~~~~~~~~~~~~~~~---------~~~~~---------~~~-~~~-------~~~~~~~~~s-~~~l~~ 205 (439)
. .+|...... ..+...+... ..+.. ... ... .....++.++ +..+++
T Consensus 159 ~---~~p~~~~~~---~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~ 232 (496)
T KOG1192|consen 159 S---YVPSPFSLS---SGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNS 232 (496)
T ss_pred c---ccCcccCcc---ccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEcc
Confidence 1 011111100 0000111110 00000 000 000 1111334444 555555
Q ss_pred HHHHHH-HHhcCCceEecCcccccCCCchhhhhcCCCCCCCcccccccccCCCCC--cEEEE------------------
Q 038151 206 AYVEEY-KKARGGKVWCVGPVSFFNKEDIDKVERGNKASIDCSGCLKWLDSWEPS--SVVYA------------------ 264 (439)
Q Consensus 206 ~~~~~~-~~~~~~~v~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vVyv------------------ 264 (439)
...... .....+++++|||+....... ....+.+|++..+.. ++||+
T Consensus 233 ~~~~~~~~~~~~~~v~~IG~l~~~~~~~------------~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~ 300 (496)
T KOG1192|consen 233 NPLLDFEPRPLLPKVIPIGPLHVKDSKQ------------KSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKE 300 (496)
T ss_pred CcccCCCCCCCCCCceEECcEEecCccc------------cccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHH
Confidence 444333 222358999999998763211 011467888877665 89999
Q ss_pred ----eccC-CCceEEEEeCCCcchhhhhhhchhhHHHHhcCCCeEEEeecchhhh-hccCCcceeeecCChhhHHHHHHc
Q 038151 265 ----LEAT-KKPFIWVVRAGDKTKELEEWLSEEKFEERIEGRGLLIRGWAPQVVI-LSHPTVGGFLTHCGWNSVLEAVSN 338 (439)
Q Consensus 265 ----l~~~-~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~p~~~l-l~~~~~~~~I~HgG~gs~~eal~~ 338 (439)
++.. ++.|+|+++...... +++++.++ ...|+...+|+||.++ |+|+++++||||||||||+|++++
T Consensus 301 l~~~l~~~~~~~FiW~~~~~~~~~------~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~ 373 (496)
T KOG1192|consen 301 LAKALESLQGVTFLWKYRPDDSIY------FPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYS 373 (496)
T ss_pred HHHHHHhCCCceEEEEecCCcchh------hhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhc
Confidence 5566 788999998764321 22233222 3457888899999998 599999999999999999999999
Q ss_pred CCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q 038151 339 GLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAK 414 (439)
Q Consensus 339 GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 414 (439)
|||++++|+++||+.||++++++.++++....+ .+.+.+..++.++++++ +|+++|+++++.++
T Consensus 374 GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~--------~~~~~~~~~~~~il~~~----~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 374 GVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRD--------LVSEELLEAIKEILENE----EYKEAAKRLSEILR 437 (496)
T ss_pred CCceecCCccccchhHHHHHHhCCCEEEEehhh--------cCcHHHHHHHHHHHcCh----HHHHHHHHHHHHHH
Confidence 999999999999999999996555555555554 65555999999999887 99999999999766
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.91 E-value=3.9e-23 Score=201.18 Aligned_cols=295 Identities=18% Similarity=0.172 Sum_probs=182.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDML 89 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 89 (439)
||++..-++-||++|.++||++|.++||+|+|+++....+. +.. ...++++..++.. ++.. ..
T Consensus 3 ~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~--~l~-----~~~g~~~~~~~~~----~l~~----~~-- 65 (352)
T PRK12446 3 KIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEK--TII-----EKENIPYYSISSG----KLRR----YF-- 65 (352)
T ss_pred eEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccc--ccC-----cccCCcEEEEecc----CcCC----Cc--
Confidence 78999999999999999999999999999999997744321 111 1125777766521 1211 00
Q ss_pred CCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC------------CCCcccEEEechhHHHHHHHhhhhccCCcC
Q 038151 90 PSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI------------KFNVPRIVFHGFSGFCLSCLHSLSVSKVHE 157 (439)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~------------~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 157 (439)
....+...... ....-...+++++ .+||+|++.. .+++|++++....
T Consensus 66 -~~~~~~~~~~~-~~~~~~~~~i~~~--~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~----------------- 124 (352)
T PRK12446 66 -DLKNIKDPFLV-MKGVMDAYVRIRK--LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDM----------------- 124 (352)
T ss_pred -hHHHHHHHHHH-HHHHHHHHHHHHh--cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCC-----------------
Confidence 00111111111 1222233445666 7999999988 6788888875544
Q ss_pred CCCCCCccccCcccCCcccccccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcC-CceEecCcccccCCCchhhh
Q 038151 158 MPGLPDQVEITKDQLPEILKKKSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARG-GKVWCVGPVSFFNKEDIDKV 236 (439)
Q Consensus 158 ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~~v~~vGp~~~~~~~~~~~~ 236 (439)
+||+.+. -..+.++.+ +-+|++ ....++ .++.++|+.+.+.-...
T Consensus 125 ~~g~~nr----------------------~~~~~a~~v-~~~f~~--------~~~~~~~~k~~~tG~Pvr~~~~~~--- 170 (352)
T PRK12446 125 TPGLANK----------------------IALRFASKI-FVTFEE--------AAKHLPKEKVIYTGSPVREEVLKG--- 170 (352)
T ss_pred CccHHHH----------------------HHHHhhCEE-EEEccc--------hhhhCCCCCeEEECCcCCcccccc---
Confidence 3443321 122333333 333422 112222 57899998765432110
Q ss_pred hcCCCCCCCcccccccccCCCCCcEEEE-----------------ecc--CCCceEEEEeCCCcchhhhhhhchhhHHHH
Q 038151 237 ERGNKASIDCSGCLKWLDSWEPSSVVYA-----------------LEA--TKKPFIWVVRAGDKTKELEEWLSEEKFEER 297 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~vVyv-----------------l~~--~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~ 297 (439)
...+..+.+.-.+.+++|+| +.. .+.+++|.++... +.. ....
T Consensus 171 --------~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~~~~vv~~~G~~~---------~~~-~~~~ 232 (352)
T PRK12446 171 --------NREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLLKYQIVHLCGKGN---------LDD-SLQN 232 (352)
T ss_pred --------cchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhccCcEEEEEeCCch---------HHH-HHhh
Confidence 01111111222234557777 111 2467788887653 111 1111
Q ss_pred hcCCCeEEEeec-c-hhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccc-----cchhhhHHHHHHHhceeEEecc
Q 038151 298 IEGRGLLIRGWA-P-QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF-----ADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 298 ~~~~~~~v~~~~-p-~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~-----~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
..+..+.+|+ + -..++..+++ +|||||.+|+.|++++|+|+|++|+. +||..||.++ ++.|+|..+..
T Consensus 233 --~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~~ 307 (352)
T PRK12446 233 --KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLYE 307 (352)
T ss_pred --cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcch
Confidence 1355566777 4 3468888888 99999999999999999999999984 5899999999 59999999876
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
+ +++++.|.+++.++++|++ .++++++++
T Consensus 308 ~-------~~~~~~l~~~l~~ll~~~~---~~~~~~~~~ 336 (352)
T PRK12446 308 E-------DVTVNSLIKHVEELSHNNE---KYKTALKKY 336 (352)
T ss_pred h-------cCCHHHHHHHHHHHHcCHH---HHHHHHHHc
Confidence 5 5999999999999998652 455555443
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=5.2e-21 Score=184.36 Aligned_cols=303 Identities=18% Similarity=0.230 Sum_probs=192.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCC-eEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGA-FVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWD 87 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh-~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~ 87 (439)
++|++...++-||++|.++|+++|.++|+ +|.+..+....+..... ..++.++.++.. ++... ...
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~-------~~~~~~~~I~~~----~~~~~-~~~- 67 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVK-------QYGIEFELIPSG----GLRRK-GSL- 67 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeecc-------ccCceEEEEecc----ccccc-CcH-
Confidence 47889999999999999999999999999 58888665333322111 225777777631 12111 000
Q ss_pred CCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC------------CCCcccEEEechhHHHHHHHhhhhccCC
Q 038151 88 MLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI------------KFNVPRIVFHGFSGFCLSCLHSLSVSKV 155 (439)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~------------~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 155 (439)
........++ .......+++++ .+||+|++-+ .+|||.+.+....
T Consensus 68 --~~~~~~~~~~----~~~~~a~~il~~--~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~--------------- 124 (357)
T COG0707 68 --KLLKAPFKLL----KGVLQARKILKK--LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNA--------------- 124 (357)
T ss_pred --HHHHHHHHHH----HHHHHHHHHHHH--cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCC---------------
Confidence 0001111222 233455566666 6999999987 8899999987666
Q ss_pred cCCCCCCCccccCcccCCcccccccchHHHHHhhccccEEEEcCccccCHHHHHHHHHhcCCceEecCcccccCCCchhh
Q 038151 156 HEMPGLPDQVEITKDQLPEILKKKSFGAPVLAAEMASYGVIVNSFEELEPAYVEEYKKARGGKVWCVGPVSFFNKEDIDK 235 (439)
Q Consensus 156 ~~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~ 235 (439)
+||+.+. .+......+..+|.+.+. ...+.+++.+|-.+...-...+
T Consensus 125 --~~G~ank-----------------------~~~~~a~~V~~~f~~~~~-------~~~~~~~~~tG~Pvr~~~~~~~- 171 (357)
T COG0707 125 --VPGLANK-----------------------ILSKFAKKVASAFPKLEA-------GVKPENVVVTGIPVRPEFEELP- 171 (357)
T ss_pred --CcchhHH-----------------------HhHHhhceeeeccccccc-------cCCCCceEEecCcccHHhhccc-
Confidence 5555431 111112233344443110 0011468888854332111000
Q ss_pred hhcCCCCCCCcccccccccCCCCCcEEEE-----------------eccC--CCceEEEEeCCCcchhhhhhhchhhHHH
Q 038151 236 VERGNKASIDCSGCLKWLDSWEPSSVVYA-----------------LEAT--KKPFIWVVRAGDKTKELEEWLSEEKFEE 296 (439)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~~~~~vVyv-----------------l~~~--~~~~v~~~~~~~~~~~~~~~~~p~~~~~ 296 (439)
..-... +....+++|+| +... ...+++.++.... +....
T Consensus 172 -----------~~~~~~-~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~~~~v~~~~G~~~~----------~~~~~ 229 (357)
T COG0707 172 -----------AAEVRK-DGRLDKKTILVTGGSQGAKALNDLVPEALAKLANRIQVIHQTGKNDL----------EELKS 229 (357)
T ss_pred -----------hhhhhh-hccCCCcEEEEECCcchhHHHHHHHHHHHHHhhhCeEEEEEcCcchH----------HHHHH
Confidence 000111 11114457777 1111 3566666665531 12222
Q ss_pred HhcCCC-eEEEeecchh-hhhccCCcceeeecCChhhHHHHHHcCCCEeccccc----cchhhhHHHHHHHhceeEEecc
Q 038151 297 RIEGRG-LLIRGWAPQV-VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF----ADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 297 ~~~~~~-~~v~~~~p~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
.....+ +.+.+|.++. .++..+++ +||++|.+|+.|++++|+|.|.+|+. .||..||..+ ++.|.|..++.
T Consensus 230 ~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~ 306 (357)
T COG0707 230 AYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQ 306 (357)
T ss_pred HHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEecc
Confidence 233333 7888888765 57777777 99999999999999999999999973 4899999999 69999999988
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
. ++|++.+.+.|.+++++++..++|++++++++..
T Consensus 307 ~-------~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p 341 (357)
T COG0707 307 S-------ELTPEKLAELILRLLSNPEKLKAMAENAKKLGKP 341 (357)
T ss_pred c-------cCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Confidence 7 6999999999999999887777788887776554
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.87 E-value=7.3e-21 Score=183.76 Aligned_cols=289 Identities=19% Similarity=0.216 Sum_probs=169.5
Q ss_pred cEEEEecCC-CccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCC
Q 038151 9 LHFVLFPFL-IQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWD 87 (439)
Q Consensus 9 ~~il~~~~p-~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~ 87 (439)
|||++...+ +.||+...++||++| +||+|+|++.....+.+++. +.+..++.. +.........
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~~~~~ 64 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPR----------FPVREIPGL----GPIQENGRLD 64 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccc----------cCEEEccCc----eEeccCCccc
Confidence 689998886 889999999999999 59999999988555444332 233333210 0111101111
Q ss_pred CCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEechhHHHHHHHhhhhccCCcCC
Q 038151 88 MLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFHGFSGFCLSCLHSLSVSKVHEM 158 (439)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 158 (439)
..........+........+.+.+++++ .+||+||+|. ..|+|++.+....... .
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~--------------~ 128 (318)
T PF13528_consen 65 RWKTVRNNIRWLARLARRIRREIRWLRE--FRPDLVISDFYPLAALAARRAGIPVIVISNQYWFL--------------H 128 (318)
T ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHcc--------------c
Confidence 0000000111111223444555666677 7999999999 7899999886555322 0
Q ss_pred CCCCCccccCcccCCcccccccchHHHHH-h-hccccEEEEcCccccCHHHHHHHHHhcCCceEecCcccccCCCchhhh
Q 038151 159 PGLPDQVEITKDQLPEILKKKSFGAPVLA-A-EMASYGVIVNSFEELEPAYVEEYKKARGGKVWCVGPVSFFNKEDIDKV 236 (439)
Q Consensus 159 pg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~~~~ 236 (439)
+... +...+ .+ ..+...... . ...+...+.-++. . ......++.++||+........
T Consensus 129 ~~~~----~~~~~--~~---~~~~~~~~~~~~~~~~~~~l~~~~~-~--------~~~~~~~~~~~~p~~~~~~~~~--- 187 (318)
T PF13528_consen 129 PNFW----LPWDQ--DF---GRLIERYIDRYHFPPADRRLALSFY-P--------PLPPFFRVPFVGPIIRPEIREL--- 187 (318)
T ss_pred ccCC----cchhh--hH---HHHHHHhhhhccCCcccceecCCcc-c--------cccccccccccCchhccccccc---
Confidence 0100 00000 00 111111111 1 2222222222222 0 0111134667888765432110
Q ss_pred hcCCCCCCCcccccccccCCCCCcEEEE-----------eccCC-CceEEEEeCCCcchhhhhhhchhhHHHHhcCCCeE
Q 038151 237 ERGNKASIDCSGCLKWLDSWEPSSVVYA-----------LEATK-KPFIWVVRAGDKTKELEEWLSEEKFEERIEGRGLL 304 (439)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~~~~~vVyv-----------l~~~~-~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 304 (439)
-....+.-+||+ ++..+ ..+++. +... ......|+.
T Consensus 188 ----------------~~~~~~~iLv~~gg~~~~~~~~~l~~~~~~~~~v~-g~~~---------------~~~~~~ni~ 235 (318)
T PF13528_consen 188 ----------------PPEDEPKILVYFGGGGPGDLIEALKALPDYQFIVF-GPNA---------------ADPRPGNIH 235 (318)
T ss_pred ----------------CCCCCCEEEEEeCCCcHHHHHHHHHhCCCCeEEEE-cCCc---------------ccccCCCEE
Confidence 011122223333 33333 454444 3331 011257999
Q ss_pred EEeec--chhhhhccCCcceeeecCChhhHHHHHHcCCCEecccc--ccchhhhHHHHHHHhceeEEecccCCCcccCCC
Q 038151 305 IRGWA--PQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPF--FADQFCNEKLVVQVLRIGVSIGAERPLHLADEV 380 (439)
Q Consensus 305 v~~~~--p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~--~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~ 380 (439)
+..+. +..++|..+++ +|+|||+||++|++++|+|++++|. ..+|..||.++ +++|+|+.++.+ ++
T Consensus 236 ~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~-------~~ 305 (318)
T PF13528_consen 236 VRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQE-------DL 305 (318)
T ss_pred EeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEcccc-------cC
Confidence 98876 34568888888 9999999999999999999999999 78999999999 799999999876 69
Q ss_pred CHHHHHHHHHHh
Q 038151 381 KKEAVEKAVNML 392 (439)
Q Consensus 381 ~~~~l~~ai~~v 392 (439)
+++.|+++|+++
T Consensus 306 ~~~~l~~~l~~~ 317 (318)
T PF13528_consen 306 TPERLAEFLERL 317 (318)
T ss_pred CHHHHHHHHhcC
Confidence 999999999865
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.79 E-value=4.8e-18 Score=164.15 Aligned_cols=84 Identities=20% Similarity=0.300 Sum_probs=68.2
Q ss_pred CCCeEEEeecc--hhhhhccCCcceeeecCChhhHHHHHHcCCCEecccccc--chhhhHHHHHHHhceeEEecccCCCc
Q 038151 300 GRGLLIRGWAP--QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFA--DQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 300 ~~~~~v~~~~p--~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
+.|+.+.+|.+ ...+|+.+++ +|||||++|++||+++|+|++++|..+ ||..||..+ ++.|+|+.++..
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~~---- 300 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEYK---- 300 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcChh----
Confidence 36888889987 3456666666 999999999999999999999999854 899999999 699999998765
Q ss_pred ccCCCCHHHHHHHHHHhhcCC
Q 038151 376 LADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~ 396 (439)
++ ++.+++.++++|+
T Consensus 301 ---~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 301 ---EL---RLLEAILDIRNMK 315 (321)
T ss_pred ---hH---HHHHHHHhccccc
Confidence 34 5555666666654
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.75 E-value=2.8e-16 Score=154.28 Aligned_cols=115 Identities=13% Similarity=0.170 Sum_probs=88.0
Q ss_pred CeEEEeecc-hhhhhccCCcceeeecCChhhHHHHHHcCCCEecccc----ccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 302 GLLIRGWAP-QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPF----FADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 302 ~~~v~~~~p-~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~----~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
++.+.+|++ ...++..+++ +|+|+|.++++||+++|+|+|++|. .++|..|+..+ .+.|.|..+..+
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i-~~~~~g~~~~~~----- 307 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL-VDAGAALLIPQS----- 307 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH-HHCCCEEEEEcc-----
Confidence 377889984 4578888888 9999999999999999999999997 37899999999 599999999765
Q ss_pred cCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q 038151 377 ADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDI 434 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~ 434 (439)
+++++.|+++|.++++|++..++|++++++++ +.++....++.+++.+
T Consensus 308 --~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 --DLTPEKLAEKLLELLSDPERLEAMAEAARALG--------KPDAAERLADLIEELA 355 (357)
T ss_pred --cCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcC--------CcCHHHHHHHHHHHHh
Confidence 57899999999999998744444444443332 2344445555544443
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.69 E-value=5.2e-15 Score=144.77 Aligned_cols=100 Identities=18% Similarity=0.217 Sum_probs=81.5
Q ss_pred CCCeEEEeec-chhhhhccCCcceeeecCChhhHHHHHHcCCCEecccc----ccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWA-PQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPF----FADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~-p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~----~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..|+.+.+|+ +...++..+++ +|+++|.+|+.||+++|+|+|+.|. ..+|..|+..+ .+.|.|..++..
T Consensus 234 ~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l-~~~g~g~~v~~~--- 307 (350)
T cd03785 234 GVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARAL-VKAGAAVLIPQE--- 307 (350)
T ss_pred CCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHH-HhCCCEEEEecC---
Confidence 4689999998 44568888888 9999999999999999999999986 36788999999 488999999764
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
..+.+++.++|+.+++|++..+.|++++++.
T Consensus 308 ----~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~ 338 (350)
T cd03785 308 ----ELTPERLAAALLELLSDPERLKAMAEAARSL 338 (350)
T ss_pred ----CCCHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3689999999999998764445555555443
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.60 E-value=1.4e-13 Score=134.49 Aligned_cols=89 Identities=20% Similarity=0.334 Sum_probs=71.5
Q ss_pred chhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccc---cchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHH
Q 038151 310 PQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF---ADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVE 386 (439)
Q Consensus 310 p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~---~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~ 386 (439)
+-..++..+++ +|+++|.+++.||+++|+|+|+.|.. ++|..|+..+ ++.+.|..++.. +.++++|.
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~~-------~~~~~~l~ 312 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQK-------ELLPEKLL 312 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEecc-------cCCHHHHH
Confidence 44568888888 99999988999999999999999863 5788899899 589999988765 46899999
Q ss_pred HHHHHhhcCCCccHHHHHHHHH
Q 038151 387 KAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 387 ~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
++++++++|++..++|.+++++
T Consensus 313 ~~i~~ll~~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 313 EALLKLLLDPANLEAMAEAARK 334 (348)
T ss_pred HHHHHHHcCHHHHHHHHHHHHh
Confidence 9999999887444444444433
No 35
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.51 E-value=5.9e-12 Score=124.72 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=75.6
Q ss_pred CCeEEEeecchh-hhhccCCcceeeecCChhhHHHHHHcCCCEecc-ccccchhhhHHHHHHHhceeEEecccCCCcccC
Q 038151 301 RGLLIRGWAPQV-VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTW-PFFADQFCNEKLVVQVLRIGVSIGAERPLHLAD 378 (439)
Q Consensus 301 ~~~~v~~~~p~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~-P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~ 378 (439)
.++.+.+|+++. .++..+++ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+ ++.|+|+..
T Consensus 256 ~~v~~~g~~~~~~~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~---------- 322 (380)
T PRK13609 256 DALKVFGYVENIDELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVI---------- 322 (380)
T ss_pred CcEEEEechhhHHHHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEE----------
Confidence 589999999874 68888888 99999988889999999999984 6777788999988 588888753
Q ss_pred CCCHHHHHHHHHHhhcCCCccHHHHHHHHH
Q 038151 379 EVKKEAVEKAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 379 ~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
-+.+++.++|.++++|++..++|++++++
T Consensus 323 -~~~~~l~~~i~~ll~~~~~~~~m~~~~~~ 351 (380)
T PRK13609 323 -RDDEEVFAKTEALLQDDMKLLQMKEAMKS 351 (380)
T ss_pred -CCHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 34789999999999987444455554444
No 36
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.48 E-value=2.6e-12 Score=127.05 Aligned_cols=105 Identities=19% Similarity=0.168 Sum_probs=81.8
Q ss_pred hhhhccCCcceeeecCChhhHHHHHHcCCCEecc----ccc---c------chhhhHHHHHHHhceeEEecccCCCcccC
Q 038151 312 VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTW----PFF---A------DQFCNEKLVVQVLRIGVSIGAERPLHLAD 378 (439)
Q Consensus 312 ~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~----P~~---~------DQ~~na~rv~~~~G~G~~~~~~~~~~~~~ 378 (439)
..++..+++ +|+-+|..|+ |++.+|+|+|++ |+. . +|..|+..+ ...++...+..+
T Consensus 262 ~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil-~~~~~~pel~q~------- 330 (385)
T TIGR00215 262 RKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNIL-ANRLLVPELLQE------- 330 (385)
T ss_pred HHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHh-cCCccchhhcCC-------
Confidence 457777777 9999999887 999999999999 763 1 277899999 488888887765
Q ss_pred CCCHHHHHHHHHHhhcCC----CccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038151 379 EVKKEAVEKAVNMLMDEG----GEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLI 431 (439)
Q Consensus 379 ~~~~~~l~~ai~~vl~~~----~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~ 431 (439)
+.|++.|.+++.++|+|+ +..+++++..+++.+. .+++|.+.+..+.++
T Consensus 331 ~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 331 ECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQR----IYCNADSERAAQAVL 383 (385)
T ss_pred CCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHH----hcCCCHHHHHHHHHh
Confidence 599999999999999987 5555666666665555 455677777665544
No 37
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.47 E-value=2.2e-11 Score=112.78 Aligned_cols=315 Identities=16% Similarity=0.146 Sum_probs=176.8
Q ss_pred CCcEEEEecC--CCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCC
Q 038151 7 SQLHFVLFPF--LIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEG 82 (439)
Q Consensus 7 ~~~~il~~~~--p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 82 (439)
+.+||+|.+. -+-||+...+.+|+.|.+. |.+|++++......-|.-. .+++++.+|- .- ....+
T Consensus 8 ~~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~--------~gVd~V~LPs--l~-k~~~G 76 (400)
T COG4671 8 KRPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGP--------AGVDFVKLPS--LI-KGDNG 76 (400)
T ss_pred ccceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCc--------ccCceEecCc--eE-ecCCC
Confidence 4679999998 4679999999999999999 9999999887555544331 3699988862 11 01111
Q ss_pred CCCCCCCCCcCcHHHHHHHHHHhh-HHHHHHHHhcCCCCeEEEEeC-CCCcccEEEechhHHHHHHHhhhhccCCcCCCC
Q 038151 83 CENWDMLPSITLVPKFFSAVEMLQ-LPLENLFREIQPKPSCLISDI-KFNVPRIVFHGFSGFCLSCLHSLSVSKVHEMPG 160 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~pd~vv~D~-~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~pg 160 (439)
.....+... + .+.+..++ ..+....+. .+||++|.|. -+| +.+..-+... ++-. -+
T Consensus 77 ~~~~~d~~~-~-----l~e~~~~Rs~lil~t~~~--fkPDi~IVd~~P~G---lr~EL~ptL~-----yl~~------~~ 134 (400)
T COG4671 77 EYGLVDLDG-D-----LEETKKLRSQLILSTAET--FKPDIFIVDKFPFG---LRFELLPTLE-----YLKT------TG 134 (400)
T ss_pred ceeeeecCC-C-----HHHHHHHHHHHHHHHHHh--cCCCEEEEeccccc---hhhhhhHHHH-----HHhh------cC
Confidence 111111111 1 12222222 334444555 7999999998 555 2222111111 1110 01
Q ss_pred CCCccccCcc---cCCcccccccchHHHHHhhcc-ccEEEEcC---ccccCHHHHHHHHHhcCCceEecCcccccCCCch
Q 038151 161 LPDQVEITKD---QLPEILKKKSFGAPVLAAEMA-SYGVIVNS---FEELEPAYVEEYKKARGGKVWCVGPVSFFNKEDI 233 (439)
Q Consensus 161 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s---~~~l~~~~~~~~~~~~~~~v~~vGp~~~~~~~~~ 233 (439)
+.. .+..+ +.|.......-.+.....+.+ -+.+++-. |.++... ++.. .....++.|+|-+ .++...
T Consensus 135 -t~~-vL~lr~i~D~p~~~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~~~~-~~~~-~~i~~k~~ytG~v--q~~~~~ 208 (400)
T COG4671 135 -TRL-VLGLRSIRDIPQELEADWRRAETVRLINRFYDLVLVYGDPDFYDPLTE-FPFA-PAIRAKMRYTGFV--QRSLPH 208 (400)
T ss_pred -Ccc-eeehHhhhhchhhhccchhhhHHHHHHHHhheEEEEecCccccChhhc-CCcc-HhhhhheeEeEEe--eccCcC
Confidence 010 01222 222222111111111222222 23344322 2222211 1111 1223779999987 111100
Q ss_pred hhhhcCCCCCCCcccccccccCCCCCcEEEE---------------------eccCCCceEEEEeCCCcchhhhhhhchh
Q 038151 234 DKVERGNKASIDCSGCLKWLDSWEPSSVVYA---------------------LEATKKPFIWVVRAGDKTKELEEWLSEE 292 (439)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vVyv---------------------l~~~~~~~v~~~~~~~~~~~~~~~~~p~ 292 (439)
.. ..|... +.+-.|.| +.......+.+++.- +|.
T Consensus 209 -----~~---------~p~~~~-pE~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~----------MP~ 263 (400)
T COG4671 209 -----LP---------LPPHEA-PEGFDILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPF----------MPE 263 (400)
T ss_pred -----CC---------CCCcCC-CccceEEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCC----------CCH
Confidence 00 001110 22223444 222333344444433 554
Q ss_pred hHHHHh---c--CCCeEEEeecchh-hhhccCCcceeeecCChhhHHHHHHcCCCEeccccc---cchhhhHHHHHHHhc
Q 038151 293 KFEERI---E--GRGLLIRGWAPQV-VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF---ADQFCNEKLVVQVLR 363 (439)
Q Consensus 293 ~~~~~~---~--~~~~~v~~~~p~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~---~DQ~~na~rv~~~~G 363 (439)
....+. . .+++.|.+|-.+. .++.-++. +|+-||+||+.|=|++|+|.+++|.. .+|..-|.|+ +++|
T Consensus 264 ~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LG 340 (400)
T COG4671 264 AQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELG 340 (400)
T ss_pred HHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcC
Confidence 433222 2 4899999998764 67777777 99999999999999999999999984 7899999999 6999
Q ss_pred eeEEecccCCCcccCCCCHHHHHHHHHHhhcC
Q 038151 364 IGVSIGAERPLHLADEVKKEAVEKAVNMLMDE 395 (439)
Q Consensus 364 ~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 395 (439)
+--.+-.+ .+++..++++|...++.
T Consensus 341 L~dvL~pe-------~lt~~~La~al~~~l~~ 365 (400)
T COG4671 341 LVDVLLPE-------NLTPQNLADALKAALAR 365 (400)
T ss_pred cceeeCcc-------cCChHHHHHHHHhcccC
Confidence 88666555 59999999999998873
No 38
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.42 E-value=1.2e-11 Score=116.68 Aligned_cols=78 Identities=12% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCceEEEEeCCCcchhhhhhhchhhHHHHh-cCCCeEEEeecchh-hhhccCCcceeeecCChhhHHHHHHcCCCEeccc
Q 038151 269 KKPFIWVVRAGDKTKELEEWLSEEKFEERI-EGRGLLIRGWAPQV-VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWP 346 (439)
Q Consensus 269 ~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~v~~~~p~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P 346 (439)
+.++.++++.... ..+.+.+.. ...|+.+.+++++. .+|..+++ +|++|| +|++|++++|+|++++|
T Consensus 199 ~~~i~vv~G~~~~--------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~ 267 (279)
T TIGR03590 199 NISITLVTGSSNP--------NLDELKKFAKEYPNIILFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAIC 267 (279)
T ss_pred CceEEEEECCCCc--------CHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEE
Confidence 3456677766532 122232222 24589999999875 78998998 999999 99999999999999999
Q ss_pred cccchhhhHHH
Q 038151 347 FFADQFCNEKL 357 (439)
Q Consensus 347 ~~~DQ~~na~r 357 (439)
+..+|..||..
T Consensus 268 ~~~nQ~~~a~~ 278 (279)
T TIGR03590 268 LAENQQSNSQQ 278 (279)
T ss_pred ecccHHHHhhh
Confidence 99999999874
No 39
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.35 E-value=9.3e-11 Score=116.11 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=70.1
Q ss_pred hhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchh--------hh-----HHHHHHHhceeEEecccCCCcccC
Q 038151 312 VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQF--------CN-----EKLVVQVLRIGVSIGAERPLHLAD 378 (439)
Q Consensus 312 ~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~--------~n-----a~rv~~~~G~G~~~~~~~~~~~~~ 378 (439)
..++..+++ +|+.+|.+++ |++++|+|+|+.|...--+ .| +..+ ...+++..+...
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~------- 324 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQE------- 324 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcCC-------
Confidence 457777887 9999998887 9999999999996542222 11 1222 122223223222
Q ss_pred CCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 379 EVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 379 ~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
..+++.|.+++.++++|++..++|+++++++.+.+ ..|++...++.+.+.+.
T Consensus 325 ~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 325 EATPEKLARALLPLLADGARRQALLEGFTELHQQL-----RCGADERAAQAVLELLK 376 (380)
T ss_pred CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHHhh
Confidence 47899999999999999865556666665555443 24566666666555443
No 40
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.33 E-value=1.1e-10 Score=115.88 Aligned_cols=114 Identities=15% Similarity=0.140 Sum_probs=87.0
Q ss_pred CCCeEEEeecchh-hhhccCCcceeeecCChhhHHHHHHcCCCEecc-ccccchhhhHHHHHHHhceeEEecccCCCccc
Q 038151 300 GRGLLIRGWAPQV-VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTW-PFFADQFCNEKLVVQVLRIGVSIGAERPLHLA 377 (439)
Q Consensus 300 ~~~~~v~~~~p~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~-P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~ 377 (439)
..++.+.+|+++. .++..+++ +|+..|-.|+.||+++|+|+|+. |..+.|..|+..+ ++.|+|+..
T Consensus 255 ~~~v~~~G~~~~~~~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~--------- 322 (391)
T PRK13608 255 NENVLILGYTKHMNEWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIA--------- 322 (391)
T ss_pred CCCeEEEeccchHHHHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEe---------
Confidence 4578888999764 58888888 99988888999999999999998 7777778999999 699999764
Q ss_pred CCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 378 DEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 378 ~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
-+.+++.++|.++++|++..++|++++++++.. .+....++.+++.+.
T Consensus 323 --~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~--------~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 323 --DTPEEAIKIVASLTNGNEQLTNMISTMEQDKIK--------YATQTICRDLLDLIG 370 (391)
T ss_pred --CCHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHhh
Confidence 357889999999998875555666666655432 333455555554443
No 41
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.23 E-value=2.6e-12 Score=112.00 Aligned_cols=86 Identities=17% Similarity=0.324 Sum_probs=72.7
Q ss_pred CCeEEEeecc-hhhhhccCCcceeeecCChhhHHHHHHcCCCEecccccc----chhhhHHHHHHHhceeEEecccCCCc
Q 038151 301 RGLLIRGWAP-QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFA----DQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 301 ~~~~v~~~~p-~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~----DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
.++.+.+|.+ ...++..+++ +|||||.||++|++++|+|+|++|... +|..||..+ ++.|+|..+...
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~~~---- 127 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLDES---- 127 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSECC----
T ss_pred CcEEEEechhhHHHHHHHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccCcc----
Confidence 5889999999 6689999998 999999999999999999999999988 999999999 599999888766
Q ss_pred ccCCCCHHHHHHHHHHhhcCC
Q 038151 376 LADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~ 396 (439)
..+.+.|.++|.+++.++
T Consensus 128 ---~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 128 ---ELNPEELAEAIEELLSDP 145 (167)
T ss_dssp ---C-SCCCHHHHHHCHCCCH
T ss_pred ---cCCHHHHHHHHHHHHcCc
Confidence 477899999999999875
No 42
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.14 E-value=1.7e-11 Score=103.38 Aligned_cols=52 Identities=21% Similarity=0.416 Sum_probs=46.3
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEee
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFR 71 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 71 (439)
|+|++.|+.||++|+++||++|++|||+|++++++.+.+.+++. +++|++++
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~---------Gl~~~~~~ 52 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA---------GLEFVPIP 52 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT---------T-EEEESS
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc---------CceEEEec
Confidence 78999999999999999999999999999999999888888666 79999875
No 43
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.09 E-value=8.8e-09 Score=102.09 Aligned_cols=95 Identities=17% Similarity=0.216 Sum_probs=74.2
Q ss_pred CCCeEEEeecchh-hhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchh-hhHHHHHHHhceeEEecccCCCccc
Q 038151 300 GRGLLIRGWAPQV-VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQF-CNEKLVVQVLRIGVSIGAERPLHLA 377 (439)
Q Consensus 300 ~~~~~v~~~~p~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~-~na~rv~~~~G~G~~~~~~~~~~~~ 377 (439)
..++.+.+|+++. +++..+++ +|+.+|-+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+
T Consensus 264 ~~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~--------- 331 (382)
T PLN02605 264 KIPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFS--------- 331 (382)
T ss_pred cCCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeec---------
Confidence 3568888999864 57887888 999999999999999999999998766675 688888 488998754
Q ss_pred CCCCHHHHHHHHHHhhcC-CCccHHHHHHHHH
Q 038151 378 DEVKKEAVEKAVNMLMDE-GGEGDERRRRAKE 408 (439)
Q Consensus 378 ~~~~~~~l~~ai~~vl~~-~~~~~~~r~~a~~ 408 (439)
-++++|.++|.+++++ ++..++|++++++
T Consensus 332 --~~~~~la~~i~~ll~~~~~~~~~m~~~~~~ 361 (382)
T PLN02605 332 --ESPKEIARIVAEWFGDKSDELEAMSENALK 361 (382)
T ss_pred --CCHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3589999999999986 5333344444444
No 44
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.03 E-value=1.3e-07 Score=93.74 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=74.4
Q ss_pred CeEEEeecc-hhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHh----ceeEEecccCCCcc
Q 038151 302 GLLIRGWAP-QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL----RIGVSIGAERPLHL 376 (439)
Q Consensus 302 ~~~v~~~~p-~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~----G~G~~~~~~~~~~~ 376 (439)
++.+..+.. -..++..+++ +|+-+|..| .|+...|+|+|++|+-..|. |+... ++. |.++.+..
T Consensus 280 ~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~~------ 348 (396)
T TIGR03492 280 TLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLAS------ 348 (396)
T ss_pred ceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecCC------
Confidence 355545543 3468888888 999999766 99999999999999877776 98877 454 66666543
Q ss_pred cCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038151 377 ADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLI 431 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~ 431 (439)
.+.+.|.+++.++++|+ +.+++ +++..++..++++++...++.+.
T Consensus 349 ---~~~~~l~~~l~~ll~d~----~~~~~---~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 349 ---KNPEQAAQVVRQLLADP----ELLER---CRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred ---CCHHHHHHHHHHHHcCH----HHHHH---HHHHHHHhcCCCCHHHHHHHHHH
Confidence 45699999999999875 32222 22233334445566665555443
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.96 E-value=6.4e-07 Score=87.16 Aligned_cols=96 Identities=20% Similarity=0.159 Sum_probs=71.3
Q ss_pred cCCCeEEEeecchhh---hhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 299 EGRGLLIRGWAPQVV---ILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 299 ~~~~~~v~~~~p~~~---ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
...++.+.+|+++.+ ++..+++ +|+.+. .++++||+++|+|+|+.+..+ +...+ +..+.|...+.
T Consensus 245 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~~- 316 (364)
T cd03814 245 RYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVEP- 316 (364)
T ss_pred cCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcCC-
Confidence 357899999988654 6777777 887764 368999999999999987543 55566 56688877754
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
.+.+++.++|.+++.|++..+++.+++++..
T Consensus 317 --------~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 317 --------GDAEAFAAALAALLADPELRRRMAARARAEA 347 (364)
T ss_pred --------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 5678899999999998755555555554443
No 46
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.91 E-value=8.6e-07 Score=90.27 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=71.0
Q ss_pred hHHHHhcCCCeEEEeecchhh---hhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHH---h
Q 038151 293 KFEERIEGRGLLIRGWAPQVV---ILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQV---L 362 (439)
Q Consensus 293 ~~~~~~~~~~~~v~~~~p~~~---ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~---~ 362 (439)
.+.+.....++.+.+++++.+ ++..+++ +|.-.. -.++.||+++|+|+|+.... .....+ +. -
T Consensus 304 ~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv-~~~~~~ 376 (465)
T PLN02871 304 ELEKMFAGTPTVFTGMLQGDELSQAYASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDII-PPDQEG 376 (465)
T ss_pred HHHHHhccCCeEEeccCCHHHHHHHHHHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhh-hcCCCC
Confidence 333344456899999997544 6666777 775543 33688999999999987643 233344 35 5
Q ss_pred ceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 363 RIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 363 G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
+.|..++. -+.+++.++|.++++|++..+++.+++++..
T Consensus 377 ~~G~lv~~---------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 415 (465)
T PLN02871 377 KTGFLYTP---------GDVDDCVEKLETLLADPELRERMGAAAREEV 415 (465)
T ss_pred CceEEeCC---------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 77877754 4589999999999988755556666666543
No 47
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.81 E-value=3.6e-06 Score=81.60 Aligned_cols=94 Identities=17% Similarity=0.158 Sum_probs=67.0
Q ss_pred cCCCeEEEeecchhh---hhccCCcceeee----cCChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 299 EGRGLLIRGWAPQVV---ILSHPTVGGFLT----HCGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 299 ~~~~~~v~~~~p~~~---ll~~~~~~~~I~----HgG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
...++.+.+++++.+ ++..+++ +|+ ..|.+ ++.||+++|+|+|+.+. ..+...+ +.-+.|..++.
T Consensus 241 ~~~~v~~~g~~~~~~~~~~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~ 313 (359)
T cd03823 241 GDPRVEFLGAYPQEEIDDFYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELV-RDGVNGLLFPP 313 (359)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHh-cCCCcEEEECC
Confidence 357899999997554 5777777 663 23444 78999999999998764 3455566 46557877755
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
-+.+++.+++.++++|++..+++++++++
T Consensus 314 ---------~d~~~l~~~i~~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 314 ---------GDAEDLAAALERLIDDPDLLERLRAGIEP 342 (359)
T ss_pred ---------CCHHHHHHHHHHHHhChHHHHHHHHhHHH
Confidence 45899999999999987544555555444
No 48
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.81 E-value=3.4e-06 Score=82.85 Aligned_cols=94 Identities=21% Similarity=0.166 Sum_probs=66.5
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeec----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.++.++ ..++..+++ +|.- |.-.++.||+++|+|+|+... ...+..+ ++-..|..++.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i-~~~~~G~~~~~---- 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVV-KHGETGFLVDV---- 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhh-cCCCceEEcCC----
Confidence 456888887765 356777777 6633 234599999999999998644 3455555 35457766644
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
-+.+++.+++..++++++..+++++++++.
T Consensus 321 -----~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 321 -----GDVEAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 468999999999998876556667776665
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.74 E-value=3.4e-06 Score=82.46 Aligned_cols=97 Identities=20% Similarity=0.179 Sum_probs=69.3
Q ss_pred cCCCeEEEeecchhh---hhccCCcceeeecCC---------hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeE
Q 038151 299 EGRGLLIRGWAPQVV---ILSHPTVGGFLTHCG---------WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGV 366 (439)
Q Consensus 299 ~~~~~~v~~~~p~~~---ll~~~~~~~~I~HgG---------~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 366 (439)
..+++.+.+++++.. ++..+++ +|.... -+++.||+++|+|+|+.+..+.+.. + ...+.|.
T Consensus 273 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~-~~~~~g~ 345 (394)
T cd03794 273 GLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V-EEAGAGL 345 (394)
T ss_pred CCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h-ccCCcce
Confidence 457899999997654 5666777 664332 2347999999999999987655443 3 2446777
Q ss_pred EecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHH
Q 038151 367 SIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGE 411 (439)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~ 411 (439)
.++. -+.+++.++|.++++|++..+++++++++...
T Consensus 346 ~~~~---------~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 346 VVPP---------GDPEALAAAILELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred EeCC---------CCHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 7654 46899999999999888666666666665554
No 50
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.70 E-value=7.5e-06 Score=81.16 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=69.1
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecC---C-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+|+++.+ ++..+++ +++.+ | -.++.||+++|+|+|+-...+ ....+ ++.+.|...+.
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~~-- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVDP-- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeCC--
Confidence 47899999998765 4777777 77542 2 358999999999999876533 44556 57678887754
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
.+.+++.++|.++++++++.+++.+++++..
T Consensus 353 -------~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~ 383 (398)
T cd03800 353 -------RDPEALAAALRRLLTDPALRRRLSRAGLRRA 383 (398)
T ss_pred -------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4689999999999988755555565555543
No 51
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.70 E-value=5e-06 Score=82.83 Aligned_cols=97 Identities=20% Similarity=0.129 Sum_probs=68.2
Q ss_pred CCCeEEEeecchhh---hhccCCcceeee---cCCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLT---HCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~---HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+++++.+ ++..+++ +|. +.|. .++.||+++|+|+|+... ......+ +.-..|..++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~~-- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVDF-- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcCC--
Confidence 46899999998764 5666777 553 2233 379999999999998643 4455556 35456777654
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
.++++++++|.++++|++...++.+++++..++
T Consensus 351 -------~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~ 383 (396)
T cd03818 351 -------FDPDALAAAVIELLDDPARRARLRRAARRTALR 383 (396)
T ss_pred -------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 569999999999999875555666666554433
No 52
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.68 E-value=9.8e-06 Score=78.84 Aligned_cols=97 Identities=20% Similarity=0.207 Sum_probs=71.1
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecC----ChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHC----GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~Hg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+++++.+ ++..+++ ++..+ .-.++.||+++|+|+|+... ...+..+ +..+.|..++..
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i-~~~~~g~~~~~~- 329 (374)
T cd03817 258 ADRVIFTGFVPREELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLV-ADGENGFLFPPG- 329 (374)
T ss_pred CCcEEEeccCChHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhhe-ecCceeEEeCCC-
Confidence 56899999998754 5777777 66443 24689999999999998654 4455666 466788888654
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMA 413 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~ 413 (439)
+. ++.+++.+++++++...++.+++++..+..
T Consensus 330 --------~~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 330 --------DE-ALAEALLRLLQDPELRRRLSKNAEESAEKF 361 (374)
T ss_pred --------CH-HHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 22 899999999998865556777766666554
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.67 E-value=1.1e-05 Score=77.93 Aligned_cols=94 Identities=17% Similarity=0.148 Sum_probs=66.7
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.++..+ ..++..+++ +|+.+. -+++.||+++|+|+|+-+.. .+...+ ++.+.|..++.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~~i-~~~~~g~~~~~---- 313 (359)
T cd03808 245 EGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCREAV-IDGVNGFLVPP---- 313 (359)
T ss_pred cceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----Cchhhh-hcCcceEEECC----
Confidence 467878777544 357777777 775443 56899999999999986543 344555 45677877644
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
-+++++.++|.+++.|++..+++.+++++.
T Consensus 314 -----~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 314 -----GDAEALADAIERLIEDPELRARMGQAARKR 343 (359)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 468999999999998875555555555554
No 54
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.65 E-value=9.2e-07 Score=80.18 Aligned_cols=93 Identities=15% Similarity=0.233 Sum_probs=72.2
Q ss_pred hhHHHHh-cCCCeEEEeecch-hhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEec
Q 038151 292 EKFEERI-EGRGLLIRGWAPQ-VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIG 369 (439)
Q Consensus 292 ~~~~~~~-~~~~~~v~~~~p~-~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 369 (439)
.+++++. ..+++........ ..++..+++ .|+-|| .|+.|++..|+|.+++|+...|--.|... +.+|+-..+.
T Consensus 200 ~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~ 275 (318)
T COG3980 200 KNLRKRAEKYPNINLYIDTNDMAELMKEADL--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLG 275 (318)
T ss_pred hHHHHHHhhCCCeeeEecchhHHHHHHhcch--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhcc
Confidence 3444443 3567776655553 358888888 999998 48999999999999999999999999999 6888876665
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcCC
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
-. +.++.....+.++++|.
T Consensus 276 ~~--------l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 276 YH--------LKDLAKDYEILQIQKDY 294 (318)
T ss_pred CC--------CchHHHHHHHHHhhhCH
Confidence 43 66777777888888876
No 55
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.64 E-value=2.4e-05 Score=75.58 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=67.4
Q ss_pred cCCCeEEEeecchh---hhhccCCcceeee----cCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 299 EGRGLLIRGWAPQV---VILSHPTVGGFLT----HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 299 ~~~~~~v~~~~p~~---~ll~~~~~~~~I~----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
...++.+.+++++. .++..+++ +|+ -|.-+++.||+++|+|+|+.+. ......+ +.-+.|..++.
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~~- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVPP- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeCC-
Confidence 46789999999754 46777777 663 2456789999999999998765 4456666 46677777754
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHH
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAK 407 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~ 407 (439)
.+++++.++|.+++++++..+++.++++
T Consensus 326 --------~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 326 --------GDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred --------CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 4589999999999988744444444444
No 56
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.63 E-value=8.6e-05 Score=74.37 Aligned_cols=117 Identities=18% Similarity=0.119 Sum_probs=77.9
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecCCh------hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHCGW------NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~HgG~------gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
-.++.+.+|+++.. ++..+++..+.+..+. +.+.|++++|+|+|+....+. .....+ + +.|+.++.
T Consensus 283 l~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i-~--~~G~~~~~ 357 (412)
T PRK10307 283 LPNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLV-E--GIGVCVEP 357 (412)
T ss_pred CCceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHH-h--CCcEEeCC
Confidence 35799999998653 6777787444444332 236899999999999865431 122344 3 78887755
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQR 437 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~ 437 (439)
-+.++++++|.++++|++..+.+++++++..++ -=+.....+++++.+.++
T Consensus 358 ---------~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 358 ---------ESVEALVAAIAALARQALLRPKLGTVAREYAER-------TLDKENVLRQFIADIRGL 408 (412)
T ss_pred ---------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHHH
Confidence 568999999999998876666777777765443 223335666666665554
No 57
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.58 E-value=1.8e-05 Score=79.45 Aligned_cols=92 Identities=23% Similarity=0.403 Sum_probs=65.1
Q ss_pred CCeEEE-eecchhh---hhccCCcceeee-c---CC---hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEec
Q 038151 301 RGLLIR-GWAPQVV---ILSHPTVGGFLT-H---CG---WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIG 369 (439)
Q Consensus 301 ~~~~v~-~~~p~~~---ll~~~~~~~~I~-H---gG---~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 369 (439)
.++++. +|++..+ ++..+++ +|. + -| -+++.||+++|+|+|+... ......+ ++-+.|..++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv-~~~~~G~lv~ 366 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELV-KHGENGLVFG 366 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHh-cCCCCEEEEC
Confidence 456654 5887544 5667777 653 1 12 3379999999999999654 3455566 5767887762
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcC---CCccHHHHHHHHHHH
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDE---GGEGDERRRRAKEYG 410 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~---~~~~~~~r~~a~~l~ 410 (439)
+.++++++|.++++| +++.++|++++++..
T Consensus 367 -----------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 367 -----------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred -----------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 379999999999998 666777777777765
No 58
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.55 E-value=0.00016 Score=69.91 Aligned_cols=82 Identities=20% Similarity=0.161 Sum_probs=60.8
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeec----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+++++. .++..+++ +|.. |.-+++.||+++|+|+|+-+.. .....+ +..+.|...+.
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~-~~~~~g~~~~~-- 328 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEII-TDGENGLLVPP-- 328 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHh-cCCcceeEECC--
Confidence 5789999999875 45666776 6532 4456899999999999986653 344556 46666776654
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCC
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGG 397 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~ 397 (439)
-+.+++.+++.+++++++
T Consensus 329 -------~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 329 -------GDPEALAEAILRLLADPW 346 (377)
T ss_pred -------CCHHHHHHHHHHHhcCcH
Confidence 568999999999998763
No 59
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.54 E-value=4.4e-05 Score=73.21 Aligned_cols=98 Identities=17% Similarity=0.226 Sum_probs=65.8
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.++..+ ..++..+++ +|.-.. -+++.||+++|+|+|+.+..+.+. .+.+....|..++.
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~~---- 303 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVPN---- 303 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeCC----
Confidence 456777776333 357777777 776542 468999999999999876544332 23223237777754
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
.+.+++.++|.++++|++..+.+++++++..+.
T Consensus 304 -----~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~ 336 (348)
T cd03820 304 -----GDVEALAEALLRLMEDEELRKRMGANARESAER 336 (348)
T ss_pred -----CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 568999999999999885555666666554444
No 60
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.51 E-value=4.4e-05 Score=76.85 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=62.7
Q ss_pred hhhccCCcceeeec-----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHH
Q 038151 313 VILSHPTVGGFLTH-----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEK 387 (439)
Q Consensus 313 ~ll~~~~~~~~I~H-----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ 387 (439)
.++..+++ ++.. +|-.+++||+++|+|+|+.|..+++......+ .+.|+++.. -+++++.+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~-----------~d~~~La~ 380 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQV-----------EDAEDLAK 380 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEE-----------CCHHHHHH
Confidence 45666776 4432 23335899999999999999988888888777 466665542 45899999
Q ss_pred HHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 388 AVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 388 ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
+|.++++|++..++|.++++++.+.
T Consensus 381 ~l~~ll~~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 381 AVTYLLTDPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 9999999876666666666665443
No 61
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.49 E-value=7.5e-05 Score=72.66 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=70.2
Q ss_pred cCCCeEEEeecchhh---hhccCCcceeee---cCChh-hHHHHHHcCCCEeccccccchhhhHHHHHHH-hceeEEecc
Q 038151 299 EGRGLLIRGWAPQVV---ILSHPTVGGFLT---HCGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQV-LRIGVSIGA 370 (439)
Q Consensus 299 ~~~~~~v~~~~p~~~---ll~~~~~~~~I~---HgG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~-~G~G~~~~~ 370 (439)
...|+.+.+|+++.+ ++..+++..+.+ +.|.| ++.||+++|+|+|+....+.+. .+ +. -+.|...+.
T Consensus 242 ~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i-~~~~~~g~~~~~ 316 (357)
T cd03795 242 LLDRVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YV-NLHGVTGLVVPP 316 (357)
T ss_pred CcceEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh----HH-hhCCCceEEeCC
Confidence 367999999999753 666677732223 23444 6899999999999976544443 33 23 466766643
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
-+.+++.++|..+++|+++.+++++++++..++
T Consensus 317 ---------~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 317 ---------GDPAALAEAIRRLLEDPELRERLGEAARERAEE 349 (357)
T ss_pred ---------CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 568999999999999886666777777665544
No 62
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.44 E-value=0.00023 Score=70.95 Aligned_cols=95 Identities=15% Similarity=0.049 Sum_probs=67.6
Q ss_pred CCCeEEEeecchh---hhhccCCcceeee---cCCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLT---HCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~---HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+++++. .++..+++ +|. +.|+ .++.||+++|+|+|+.... .....+ ++-+.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAV-ADGETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhh-ccCCceEECCC--
Confidence 4678999998764 46777777 664 2344 4899999999999987543 344455 46567777654
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
-+.++++++|.+++++++..+++++++++..
T Consensus 353 -------~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 353 -------HDPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred -------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4689999999999988755556666666543
No 63
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.43 E-value=0.00012 Score=71.21 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=64.9
Q ss_pred CCCeEEEee-cchh---hhhccCCcceeeec------CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEec
Q 038151 300 GRGLLIRGW-APQV---VILSHPTVGGFLTH------CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIG 369 (439)
Q Consensus 300 ~~~~~v~~~-~p~~---~ll~~~~~~~~I~H------gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 369 (439)
..++.+.+. +++. .++..+++ +|.- |-.++++||+++|+|+|+-+..+ ...+ ..-+.|..++
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEc
Confidence 467777654 7754 46666776 6632 33458899999999999987644 2334 3556777665
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
. -+.+++.+++.+++++++..+++++++++..++
T Consensus 318 ~---------~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 318 P---------GDPAALAEAIRRLLADPELAQALRARAREYARA 351 (366)
T ss_pred C---------CCHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh
Confidence 4 458999999999999875555555555554433
No 64
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.40 E-value=0.00029 Score=68.34 Aligned_cols=92 Identities=15% Similarity=0.138 Sum_probs=66.5
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecC---C-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+|+++.+ ++..+++ +|.-. | -.++.||+++|+|+|+.+. ......+ .. +.|...+.+
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~-~~-~~~~~~~~~- 331 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELI-EY-GCGWVVDDD- 331 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHh-hc-CceEEeCCC-
Confidence 57889999998644 5666777 65432 2 4579999999999999754 3445555 35 777766443
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
.+++.++|.++++++++.+++.+++++.
T Consensus 332 ---------~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 332 ---------VDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ---------hHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 4999999999999875556666666665
No 65
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.31 E-value=0.00024 Score=69.19 Aligned_cols=97 Identities=12% Similarity=0.122 Sum_probs=66.1
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeec----CCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTH----CGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERP 373 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~H----gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 373 (439)
..++.+.+|.++ ..++..+++ +|+- -|+ +++.||+++|+|+|+.-. ......+ ..-+.|..++.
T Consensus 245 ~~~v~~~g~~~~~~~~l~~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~--- 314 (355)
T cd03819 245 QDRVTFVGHCSDMPAAYALADI--VVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETV-RPGETGLLVPP--- 314 (355)
T ss_pred cceEEEcCCcccHHHHHHhCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHH-hCCCceEEeCC---
Confidence 467888888543 357777887 5532 233 599999999999998654 2344455 45557877754
Q ss_pred CcccCCCCHHHHHHHHHHhh-cCCCccHHHHHHHHHHHHH
Q 038151 374 LHLADEVKKEAVEKAVNMLM-DEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 374 ~~~~~~~~~~~l~~ai~~vl-~~~~~~~~~r~~a~~l~~~ 412 (439)
-+.+.+.++|..++ .++++.++++++|++..+.
T Consensus 315 ------~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 315 ------GDAEALAQALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred ------CCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 57899999996555 4665566677777666554
No 66
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.30 E-value=0.00018 Score=69.26 Aligned_cols=94 Identities=27% Similarity=0.321 Sum_probs=61.3
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCCCCCcCcHHHH
Q 038151 19 QGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDMLPSITLVPKF 98 (439)
Q Consensus 19 ~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 98 (439)
.-|+.=+-.+.++|.++||+|.+.+-+.. ...+.++.. ++++..+.. .+ .+....+
T Consensus 10 p~hvhfFk~~I~eL~~~GheV~it~R~~~--~~~~LL~~y-----g~~y~~iG~--------~g---------~~~~~Kl 65 (335)
T PF04007_consen 10 PAHVHFFKNIIRELEKRGHEVLITARDKD--ETEELLDLY-----GIDYIVIGK--------HG---------DSLYGKL 65 (335)
T ss_pred chHHHHHHHHHHHHHhCCCEEEEEEeccc--hHHHHHHHc-----CCCeEEEcC--------CC---------CCHHHHH
Confidence 34999999999999999999999876532 233333322 688887731 00 1223334
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEech
Q 038151 99 FSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFHGF 139 (439)
Q Consensus 99 ~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~~~ 139 (439)
........ .+.+++++ .+||++|+-. -+|+|++.+.=+
T Consensus 66 ~~~~~R~~-~l~~~~~~--~~pDv~is~~s~~a~~va~~lgiP~I~f~D~ 112 (335)
T PF04007_consen 66 LESIERQY-KLLKLIKK--FKPDVAISFGSPEAARVAFGLGIPSIVFNDT 112 (335)
T ss_pred HHHHHHHH-HHHHHHHh--hCCCEEEecCcHHHHHHHHHhCCCeEEEecC
Confidence 44433333 33444455 6999999877 889999998543
No 67
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.30 E-value=9.6e-05 Score=72.12 Aligned_cols=95 Identities=20% Similarity=0.197 Sum_probs=65.1
Q ss_pred CCCeEEEeecc-hh---hhhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 300 GRGLLIRGWAP-QV---VILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 300 ~~~~~v~~~~p-~~---~ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
..++.+.+|++ +. .++..+++ ++.-.. -+++.||+++|+|+|+.... .....+ +..+.|..++.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEeCC-
Confidence 45778889988 43 35777777 777543 47899999999999986542 233344 34456666643
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
.+.+++.+++.+++++++..+++.+++++..
T Consensus 315 --------~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 315 --------GDPEDLAEGIEWLLADPDEREELGEAARELA 345 (365)
T ss_pred --------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 5689999999999988754555555555443
No 68
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.28 E-value=0.00038 Score=67.63 Aligned_cols=95 Identities=19% Similarity=0.188 Sum_probs=67.1
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeec----------CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeE
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTH----------CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGV 366 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~H----------gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 366 (439)
..++.+.+++++. .++..+++ ++.- |.-+++.||+++|+|+|+.+.. + ....+ +....|.
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~-~---~~~~i-~~~~~g~ 307 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS-G---IPELV-EDGETGL 307 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCC-C---cchhh-hCCCceE
Confidence 5789999999754 35666777 6652 2346899999999999987642 2 33345 4545777
Q ss_pred EecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 367 SIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
.++. -+.+++.++|..++++++...++++++++..
T Consensus 308 ~~~~---------~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~ 342 (355)
T cd03799 308 LVPP---------GDPEALADAIERLLDDPELRREMGEAGRARV 342 (355)
T ss_pred EeCC---------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 7744 4689999999999998755556666665543
No 69
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.24 E-value=0.00076 Score=66.79 Aligned_cols=94 Identities=15% Similarity=0.053 Sum_probs=66.4
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeecC---C-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+++++. .++..+++ ++... | -.++.||+++|+|+|+.-..+ ....+ ..-+.|...+
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i-~~~~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETV-VDGETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHh-ccCCceEEeC---
Confidence 4789999999876 45666777 66432 2 247899999999999975432 33445 3545676652
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
.+.+++.++|.+++++++..+++.+++++..
T Consensus 349 -------~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~ 379 (392)
T cd03805 349 -------PTPEEFAEAMLKLANDPDLADRMGAAGRKRV 379 (392)
T ss_pred -------CCHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 3588999999999998866666777766643
No 70
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.24 E-value=0.00064 Score=68.71 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=63.7
Q ss_pred CCCeEEEeecchhhh---hccC--CcceeeecC---Ch-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 300 GRGLLIRGWAPQVVI---LSHP--TVGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~p~~~l---l~~~--~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
..++.+.+++++.++ +..+ ++++||... |+ .+++||+++|+|+|+-... .+...+ +.-..|..++.
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv-~~~~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII-ANCRNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh-cCCCcEEEeCC
Confidence 456777787776543 4444 224487654 43 4899999999999988653 344455 45456777755
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
-++++++++|.++++|++..+++.+++++
T Consensus 391 ---------~d~~~la~~i~~ll~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 391 ---------LDLEAIASALEDALSDSSQWQLWSRNGIE 419 (439)
T ss_pred ---------CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 56899999999999887444445555444
No 71
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.19 E-value=0.0016 Score=70.95 Aligned_cols=97 Identities=20% Similarity=0.183 Sum_probs=65.3
Q ss_pred CCCeEEEeecchhh---hhccCC--cceeeec---CChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 300 GRGLLIRGWAPQVV---ILSHPT--VGGFLTH---CGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~--~~~~I~H---gG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
..++.+.+++++.+ ++..++ .+.||+- =|+| +++||+++|+|+|+-...+ ....+ +.-.-|+.++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVdP 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVDP 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEECC
Confidence 46777878877654 444342 1237764 3444 8899999999999986533 33344 34456877755
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
-++++|+++|.++++|++...+|.+++++..
T Consensus 622 ---------~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v 652 (1050)
T TIGR02468 622 ---------HDQQAIADALLKLVADKQLWAECRQNGLKNI 652 (1050)
T ss_pred ---------CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 5689999999999998755555666655543
No 72
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.09 E-value=0.00098 Score=65.24 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=67.1
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecC----------ChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeE
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHC----------GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGV 366 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~Hg----------G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 366 (439)
..++.+.+++++.+ ++..+++ +|..+ --+++.||+++|+|+|+-+.. .+...+ +..+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhhe-ecCCeeE
Confidence 46788889988654 5666777 66422 246899999999999987663 355566 4667887
Q ss_pred EecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 367 SIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
.++. .+.+++.++|.++++|++..+++.+++++.
T Consensus 317 ~~~~---------~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPE---------GDVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECC---------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 7754 568999999999998764444555555443
No 73
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.06 E-value=0.0014 Score=63.28 Aligned_cols=91 Identities=24% Similarity=0.270 Sum_probs=61.3
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeecCCh----hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTHCGW----NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~HgG~----gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.+..++ ..++..+++ +|..+.+ +++.||+++|+|+|+.. ...+...+ ++ .|..++.
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~-~~--~g~~~~~---- 316 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELV-GD--TGFLVPP---- 316 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHh-hc--CCEEeCC----
Confidence 346666554443 357777777 7765543 79999999999999854 34555566 35 5666644
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
-+.+++.+++.+++++++..+++.+++++
T Consensus 317 -----~~~~~l~~~i~~l~~~~~~~~~~~~~~~~ 345 (365)
T cd03807 317 -----GDPEALAEAIEALLADPALRQALGEAARE 345 (365)
T ss_pred -----CCHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 45899999999999876444444444443
No 74
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.02 E-value=0.0046 Score=61.63 Aligned_cols=79 Identities=16% Similarity=0.179 Sum_probs=54.2
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeec---CChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTH---CGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~H---gG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
.+++.+.+|+++. .++..+++ +|.- -|.| ++.||+++|+|+|+-...+ ....+ +. |.+... .
T Consensus 249 ~~~v~~~G~~~~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~--~- 317 (398)
T cd03796 249 QDRVELLGAVPHERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLA--E- 317 (398)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-Cceeec--C-
Confidence 4678889999764 36666777 6643 2444 9999999999999977643 23344 23 333222 2
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCC
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
.+.+++.+++.+++++.
T Consensus 318 -------~~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 318 -------PDVESIVRKLEEAISIL 334 (398)
T ss_pred -------CCHHHHHHHHHHHHhCh
Confidence 46899999999999864
No 75
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.02 E-value=0.0014 Score=65.39 Aligned_cols=93 Identities=22% Similarity=0.264 Sum_probs=64.5
Q ss_pred cCCCeEEEeecchh-hhhccCCcceee--ec--CChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 299 EGRGLLIRGWAPQV-VILSHPTVGGFL--TH--CGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 299 ~~~~~~v~~~~p~~-~ll~~~~~~~~I--~H--gG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
...++.+.+++++. .++..+++ +| ++ .|.+ .+.||+++|+|+|+.+...+. .. +.-|.|+.+.
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~-----i~-~~~~~g~lv~--- 346 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG-----ID-ALPGAELLVA--- 346 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc-----cc-ccCCcceEeC---
Confidence 45789999999864 56777777 65 32 4544 699999999999998753221 11 2345676663
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEY 409 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l 409 (439)
.++++++++|.++++|++..+++.+++++.
T Consensus 347 -------~~~~~la~ai~~ll~~~~~~~~~~~~ar~~ 376 (397)
T TIGR03087 347 -------ADPADFAAAILALLANPAEREELGQAARRR 376 (397)
T ss_pred -------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 358999999999998875455555555554
No 76
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.02 E-value=0.0028 Score=61.61 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=78.6
Q ss_pred CCeEEEeecchhh-hhccCCc---c-eeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCc
Q 038151 301 RGLLIRGWAPQVV-ILSHPTV---G-GFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 301 ~~~~v~~~~p~~~-ll~~~~~---~-~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
.++.+.|-..... ++.-+++ + .++.+||+| ..|++++|+|+|.-|+..-|.+.+.++ ++.|.|+.++.
T Consensus 300 tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~~----- 372 (419)
T COG1519 300 TDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVED----- 372 (419)
T ss_pred CcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEECC-----
Confidence 3555555544332 2333332 1 166799999 789999999999999999999999999 69999999833
Q ss_pred ccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q 038151 376 LADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRA 416 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 416 (439)
++.+.+++..+++|+++..+|.+++.++-+..+.+
T Consensus 373 ------~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ga 407 (419)
T COG1519 373 ------ADLLAKAVELLLADEDKREAYGRAGLEFLAQNRGA 407 (419)
T ss_pred ------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhhHH
Confidence 78899999999988777777888888777776643
No 77
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.00 E-value=0.0034 Score=61.16 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=56.0
Q ss_pred cCCCeEEEeecchhh---hhccCCcceeeecCCh-----hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 299 EGRGLLIRGWAPQVV---ILSHPTVGGFLTHCGW-----NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 299 ~~~~~~v~~~~p~~~---ll~~~~~~~~I~HgG~-----gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
..+++.+.+++++.+ ++..+++ ++.+.-. +++.||+++|+|+|+....+ +...+ +. .|...+.
T Consensus 246 ~~~~V~~~g~~~~~~~~~~~~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~ 316 (363)
T cd04955 246 ADPRIIFVGPIYDQELLELLRYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKV 316 (363)
T ss_pred CCCcEEEccccChHHHHHHHHhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecC
Confidence 367899999998764 4444555 5554433 47999999999999876532 22223 23 2333322
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
. + .+++++.+++++++...++.+++++
T Consensus 317 ~---------~--~l~~~i~~l~~~~~~~~~~~~~~~~ 343 (363)
T cd04955 317 G---------D--DLASLLEELEADPEEVSAMAKAARE 343 (363)
T ss_pred c---------h--HHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2 1 2999999999876444444444443
No 78
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.00 E-value=0.00064 Score=66.90 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=71.0
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
.+++.+.+.+++. .++..+++ +|+..|. .+.||+++|+|+|..+..++++. .+ ..|.+..+ .
T Consensus 254 ~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e---~~--~~g~~~lv--~----- 318 (365)
T TIGR00236 254 SKRVHLIEPLEYLDFLNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE---TV--EAGTNKLV--G----- 318 (365)
T ss_pred CCCEEEECCCChHHHHHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH---HH--hcCceEEe--C-----
Confidence 3578877766543 45666666 9988774 47999999999999976666553 22 35766655 2
Q ss_pred cCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q 038151 377 ADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQ 432 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~ 432 (439)
.++++|.+++.++++|+ ..+++. +... +..++|+++.+.++.+..
T Consensus 319 ---~d~~~i~~ai~~ll~~~----~~~~~~---~~~~-~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 319 ---TDKENITKAAKRLLTDP----DEYKKM---SNAS-NPYGDGEASERIVEELLN 363 (365)
T ss_pred ---CCHHHHHHHHHHHHhCh----HHHHHh---hhcC-CCCcCchHHHHHHHHHHh
Confidence 45899999999999876 444332 2222 223456777666665544
No 79
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.99 E-value=0.0019 Score=61.80 Aligned_cols=89 Identities=16% Similarity=0.115 Sum_probs=59.1
Q ss_pred CCCeEEEeecchh-hhhccCCcceeeec----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQV-VILSHPTVGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~~-~ll~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.++.++. .++..+++ +|+- |.-+++.||+++|+|+|+-.. ......+ ++-+.|...+.
T Consensus 245 ~~~v~~~g~~~~~~~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~---- 313 (353)
T cd03811 245 ADRVHFLGFQSNPYPYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDC----PGPREIL-EDGENGLLVPV---- 313 (353)
T ss_pred CccEEEecccCCHHHHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCC----CChHHHh-cCCCceEEECC----
Confidence 5678888887653 57777777 6643 234579999999999998644 3555666 57778887755
Q ss_pred cccCCCCHHHH---HHHHHHhhcCCCccHHHHH
Q 038151 375 HLADEVKKEAV---EKAVNMLMDEGGEGDERRR 404 (439)
Q Consensus 375 ~~~~~~~~~~l---~~ai~~vl~~~~~~~~~r~ 404 (439)
-+.+.+ .+++..++.+++...++++
T Consensus 314 -----~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 314 -----GDEAALAAAALALLDLLLDPELRERLAA 341 (353)
T ss_pred -----CCHHHHHHHHHHHHhccCChHHHHHHHH
Confidence 456666 5566666666543334444
No 80
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.95 E-value=0.0015 Score=63.55 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=54.9
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.++..+ ..++..+++ +|.-.. -+++.||+++|+|+|+. |...+...+ +. .|..+..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i-~~--~g~~~~~---- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVV-GD--SGLIVPI---- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEe-cC--CceEeCC----
Confidence 457888887754 467777777 555432 46899999999999974 445566566 35 4444433
Q ss_pred cccCCCCHHHHHHHHHHhhcC
Q 038151 375 HLADEVKKEAVEKAVNMLMDE 395 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~ 395 (439)
-+.+++.+++.+++++
T Consensus 311 -----~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 311 -----SDPEALANKIDEILKM 326 (360)
T ss_pred -----CCHHHHHHHHHHHHhC
Confidence 5688999999999843
No 81
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.91 E-value=0.0098 Score=58.35 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=64.5
Q ss_pred CCCeEEEeecch--hh---hhccCCcceeeecC----ChhhHHHHHHcCCCEeccc-cccchhhhHHHHHHHhceeEEec
Q 038151 300 GRGLLIRGWAPQ--VV---ILSHPTVGGFLTHC----GWNSVLEAVSNGLPMVTWP-FFADQFCNEKLVVQVLRIGVSIG 369 (439)
Q Consensus 300 ~~~~~v~~~~p~--~~---ll~~~~~~~~I~Hg----G~gs~~eal~~GvP~v~~P-~~~DQ~~na~rv~~~~G~G~~~~ 369 (439)
+.++.+.+|+++ .. .+..+++ +|... --.++.||+++|+|+|+.- ..+ ....+ +.-..|..++
T Consensus 235 ~~~v~f~G~~~~~~~~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~ 307 (359)
T PRK09922 235 EQRIIWHGWQSQPWEVVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYT 307 (359)
T ss_pred CCeEEEecccCCcHHHHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEEC
Confidence 568999998754 22 2333455 66532 2469999999999999875 322 22345 4556787774
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcCCCc--cHHHHHHHHHHHHH
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDEGGE--GDERRRRAKEYGEM 412 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~--~~~~r~~a~~l~~~ 412 (439)
. -+.+++.++|.++++|++. .+.++++++++..+
T Consensus 308 ~---------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 343 (359)
T PRK09922 308 P---------GNIDEFVGKLNKVISGEVKYQHDAIPNSIERFYEV 343 (359)
T ss_pred C---------CCHHHHHHHHHHHHhCcccCCHHHHHHHHHHhhHH
Confidence 4 5799999999999998852 34455555555443
No 82
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.90 E-value=0.0023 Score=62.26 Aligned_cols=87 Identities=16% Similarity=0.072 Sum_probs=60.3
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeec----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..++.+.++..+ ..++..+++ +|+- |--.+++||+++|+|+|+-...+ ....+ +. +.|.....
T Consensus 248 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~---- 315 (358)
T cd03812 248 EDKVIFLGVRNDVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD---- 315 (358)
T ss_pred CCcEEEecccCCHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC----
Confidence 467888887544 357777777 6653 33568999999999999865543 33445 35 55555433
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERR 403 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r 403 (439)
-++++++++|.++++|++..+.+.
T Consensus 316 -----~~~~~~a~~i~~l~~~~~~~~~~~ 339 (358)
T cd03812 316 -----ESPEIWAEEILKLKSEDRRERSSE 339 (358)
T ss_pred -----CCHHHHHHHHHHHHhCcchhhhhh
Confidence 458999999999999985444443
No 83
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=97.87 E-value=0.0097 Score=57.23 Aligned_cols=78 Identities=17% Similarity=0.163 Sum_probs=53.8
Q ss_pred CCCeEEEeecchhh---hhccCCcceeee----cCCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLT----HCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~----HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
.+++.+.+++++.+ ++..+++ ++. +-|+ .++.||+++|+|+|+.... .....+ +.-..|..+ .
T Consensus 223 ~~~v~~~G~~~~~~~~~~~~~~d~--~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~--~ 293 (335)
T cd03802 223 GPDIEYLGEVGGAEKAELLGNARA--LLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLV--D 293 (335)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEe--C
Confidence 57899999998754 5666777 543 2344 4799999999999987653 333344 343356555 2
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcC
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDE 395 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~ 395 (439)
. .+++.+++.++++.
T Consensus 294 --------~-~~~l~~~l~~l~~~ 308 (335)
T cd03802 294 --------S-VEELAAAVARADRL 308 (335)
T ss_pred --------C-HHHHHHHHHHHhcc
Confidence 2 78999999988753
No 84
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.83 E-value=0.00067 Score=65.80 Aligned_cols=91 Identities=22% Similarity=0.224 Sum_probs=58.6
Q ss_pred hhhhccCCcceeeecCChhhHHHHHHcCCCEeccccc--cchhhhHHHHHH---HhceeEEecc-c--CCC---cccCCC
Q 038151 312 VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF--ADQFCNEKLVVQ---VLRIGVSIGA-E--RPL---HLADEV 380 (439)
Q Consensus 312 ~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~--~DQ~~na~rv~~---~~G~G~~~~~-~--~~~---~~~~~~ 380 (439)
.+++..+++ +|+-+|..|+ |++.+|+|+|+ ++- .-|..||+++ . ..|+.-.+-. - +.- -..++.
T Consensus 230 ~~~m~~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~l-v~~~~igL~Nii~~~~~~~~vvPEllQ~~~ 304 (347)
T PRK14089 230 HKALLEAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMF-VKLKHIGLANIFFDFLGKEPLHPELLQEFV 304 (347)
T ss_pred HHHHHhhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHH-HcCCeeehHHHhcCCCcccccCchhhcccC
Confidence 467887888 9999999998 99999999999 553 4578899998 4 3443322211 0 000 000158
Q ss_pred CHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 381 KKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 381 ~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
|++.|.+++.+. +. +++++...++.+.
T Consensus 305 t~~~la~~i~~~-~~----~~~~~~~~~l~~~ 331 (347)
T PRK14089 305 TVENLLKAYKEM-DR----EKFFKKSKELREY 331 (347)
T ss_pred CHHHHHHHHHHH-HH----HHHHHHHHHHHHH
Confidence 999999999772 11 1445444444444
No 85
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.71 E-value=0.025 Score=55.84 Aligned_cols=99 Identities=18% Similarity=0.181 Sum_probs=62.6
Q ss_pred CeEE-Eeecchh---hhhccCCcceeeec---CC-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCC
Q 038151 302 GLLI-RGWAPQV---VILSHPTVGGFLTH---CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERP 373 (439)
Q Consensus 302 ~~~v-~~~~p~~---~ll~~~~~~~~I~H---gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 373 (439)
++.. .+++++. .++..+++ +|+- -| -.+++||+++|+|+|+... ......+ +.-+.|..++....
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i-~~~~~G~~~~~~~~ 333 (388)
T TIGR02149 261 GIIWINKMLPKEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVV-VDGETGFLVPPDNS 333 (388)
T ss_pred ceEEecCCCCHHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHh-hCCCceEEcCCCCC
Confidence 3543 4567654 45666777 7653 23 3467999999999998654 3455556 46667888865410
Q ss_pred CcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 374 LHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 374 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
.. .-..+.+.++|.++++|++..+++.+++++..
T Consensus 334 ~~---~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 334 DA---DGFQAELAKAINILLADPELAKKMGIAGRKRA 367 (388)
T ss_pred cc---cchHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 00 01128899999999988755555666665543
No 86
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.67 E-value=0.0013 Score=64.58 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
..++.+.+..++. .++..+++ +|+.+| |.+.||+++|+|+|+++.. |. +..+ .+.|++..+ .
T Consensus 257 ~~~v~~~~~~~~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~-~~~g~~~~~--~----- 321 (363)
T cd03786 257 HPNVLLISPLGYLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET-VESGTNVLV--G----- 321 (363)
T ss_pred CCCEEEECCcCHHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh-hheeeEEec--C-----
Confidence 4677777665543 35656777 999999 8888999999999998743 32 3334 255666544 2
Q ss_pred cCCCCHHHHHHHHHHhhcCC
Q 038151 377 ADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~ 396 (439)
-+.++|.++|.++++++
T Consensus 322 ---~~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 322 ---TDPEAILAAIEKLLSDE 338 (363)
T ss_pred ---CCHHHHHHHHHHHhcCc
Confidence 24889999999999875
No 87
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.54 E-value=0.012 Score=57.09 Aligned_cols=94 Identities=17% Similarity=0.206 Sum_probs=62.1
Q ss_pred cCCCeEEEeecchhh---hhccCCcceeeec----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 299 EGRGLLIRGWAPQVV---ILSHPTVGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 299 ~~~~~~v~~~~p~~~---ll~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
...++.+.+++++.+ ++..+++ ++.- |..+++.||+++|+|+|+-... .....+ .. .|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~-~~--~~~~~~~- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVA-GD--AALYFDP- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----Ccccee-cC--ceeeeCC-
Confidence 467889999997753 5666676 5433 2345899999999999986542 222223 22 3444433
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
-+.+++.++|.++++|++...++.+++++..
T Consensus 321 --------~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 351 (365)
T cd03809 321 --------LDPEALAAAIERLLEDPALREELRERGLARA 351 (365)
T ss_pred --------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4689999999999998855555555555433
No 88
>PLN02316 synthase/transferase
Probab=97.48 E-value=0.18 Score=55.60 Aligned_cols=121 Identities=13% Similarity=0.024 Sum_probs=72.6
Q ss_pred CCeEEEeecchh---hhhccCCcceeeecC---Ch-hhHHHHHHcCCCEecccccc--chhhhH----HH--HHHHhcee
Q 038151 301 RGLLIRGWAPQV---VILSHPTVGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFA--DQFCNE----KL--VVQVLRIG 365 (439)
Q Consensus 301 ~~~~v~~~~p~~---~ll~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~--DQ~~na----~r--v~~~~G~G 365 (439)
.++.+....+.. .++..+++ |+.-+ |. .+.+||+++|+|.|+.-..+ |.-... .+ ....-+-|
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tG 977 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNG 977 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCce
Confidence 456555444443 35666666 77532 22 47899999999988865432 211111 00 00012467
Q ss_pred EEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh
Q 038151 366 VSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQRA 438 (439)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~~ 438 (439)
...+. .+++.|..+|.+++. .+.+....+++..++.+...=|-....++.++.-.+..
T Consensus 978 flf~~---------~d~~aLa~AL~raL~------~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 978 FSFDG---------ADAAGVDYALNRAIS------AWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred EEeCC---------CCHHHHHHHHHHHHh------hhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 77754 678999999999996 34455556677777776666666666666665544443
No 89
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.41 E-value=0.14 Score=54.36 Aligned_cols=97 Identities=26% Similarity=0.304 Sum_probs=65.4
Q ss_pred CCCeEEEeecchh-hhhccCCcceeee---cCC-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 300 GRGLLIRGWAPQV-VILSHPTVGGFLT---HCG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~~-~ll~~~~~~~~I~---HgG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
.+++.+.+|.++. .++..+++ +|. +.| -+++.||+++|+|+|+.... .....+ ++-..|+.++..
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~--- 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPAD--- 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCC---
Confidence 5778888887753 57777777 664 445 45899999999999997653 244455 454578888765
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
+.+.+++.+++.+++.+......+++++++..
T Consensus 643 ----d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 643 ----TVTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred ----CCChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 46677788887777654322236666655543
No 90
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.40 E-value=0.21 Score=53.44 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=58.2
Q ss_pred CCCeEEEeec-ch---hhhhcc-CC-cceeeec---CCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEec
Q 038151 300 GRGLLIRGWA-PQ---VVILSH-PT-VGGFLTH---CGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIG 369 (439)
Q Consensus 300 ~~~~~v~~~~-p~---~~ll~~-~~-~~~~I~H---gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 369 (439)
..++.+.++. +. .+++.+ ++ .+.||.- =|. .+++||+++|+|+|+--.. -....+ +.-.-|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV-~dg~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEII-QDGVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeC
Confidence 3567766664 22 234442 22 2336643 233 3899999999999986543 355566 4656788886
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhh----cCCCccHHHHHHHH
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLM----DEGGEGDERRRRAK 407 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~r~~a~ 407 (439)
. -++++++++|.+++ +|++..+++.++++
T Consensus 693 p---------~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~ 725 (784)
T TIGR02470 693 P---------YHGEEAAEKIVDFFEKCDEDPSYWQKISQGGL 725 (784)
T ss_pred C---------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 5 56888999988875 46544444554443
No 91
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.39 E-value=0.00025 Score=58.28 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=45.2
Q ss_pred EEeecch-hhhhccCCcceeeecCChhhHHHHHHcCCCEecccc----ccchhhhHHHHHHHhcee
Q 038151 305 IRGWAPQ-VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPF----FADQFCNEKLVVQVLRIG 365 (439)
Q Consensus 305 v~~~~p~-~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~----~~DQ~~na~rv~~~~G~G 365 (439)
..+|-|. .+....+++ ||+|+|+||++|.|+.|+|.|+++- -..|-..|..++ +.|.=
T Consensus 67 ~y~f~psl~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~-~egyL 129 (170)
T KOG3349|consen 67 GYDFSPSLTEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLA-EEGYL 129 (170)
T ss_pred EEecCccHHHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHH-hcCcE
Confidence 3345554 344555666 9999999999999999999999994 377999999995 66653
No 92
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.33 E-value=0.055 Score=54.59 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=49.5
Q ss_pred EEEeecchhhhhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCC
Q 038151 304 LIRGWAPQVVILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADE 379 (439)
Q Consensus 304 ~v~~~~p~~~ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~ 379 (439)
++.++.+..+++...++ ||.-+- -.++.||+++|+|+|+.-..+ + ..+ .+-+-|...
T Consensus 287 vf~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~----------- 347 (462)
T PLN02846 287 VYPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTY----------- 347 (462)
T ss_pred EECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEec-----------
Confidence 34555556668888877 887743 458999999999999986543 2 233 233333333
Q ss_pred CCHHHHHHHHHHhhcCC
Q 038151 380 VKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 380 ~~~~~l~~ai~~vl~~~ 396 (439)
-+.+++.+++.++|+++
T Consensus 348 ~~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 348 DDGKGFVRATLKALAEE 364 (462)
T ss_pred CCHHHHHHHHHHHHccC
Confidence 23678899999988743
No 93
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.24 E-value=0.038 Score=56.90 Aligned_cols=96 Identities=16% Similarity=0.176 Sum_probs=56.2
Q ss_pred hhhhccCCcceeeecCChhhHHHHHHcCCCEeccccc-cchhhhHHHHHHHh--c--------eeEEecccCCCcccCCC
Q 038151 312 VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF-ADQFCNEKLVVQVL--R--------IGVSIGAERPLHLADEV 380 (439)
Q Consensus 312 ~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~-~DQ~~na~rv~~~~--G--------~G~~~~~~~~~~~~~~~ 380 (439)
.+++..+++ .+.-+|- .|+|+..+|+|+|++=-. .=-...|+++. +. . +|..+-++--+ +..+.
T Consensus 483 ~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lv-ki~i~yIsLpNIIagr~VvPEllq-gQ~~~ 557 (608)
T PRK01021 483 YELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIF-KIILPAYSLPNIILGSTIFPEFIG-GKKDF 557 (608)
T ss_pred HHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHH-hccCCeeehhHHhcCCCcchhhcC-CcccC
Confidence 467877777 7777774 588999999999996221 11234455554 31 1 22222111000 01258
Q ss_pred CHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHH
Q 038151 381 KKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMA 413 (439)
Q Consensus 381 ~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~ 413 (439)
|++.|.+++ ++|.|++..+++++..+++.+.+
T Consensus 558 tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 558 QPEEVAAAL-DILKTSQSKEKQKDACRDLYQAM 589 (608)
T ss_pred CHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHh
Confidence 999999997 78887744445555555555443
No 94
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.22 E-value=0.0019 Score=64.69 Aligned_cols=112 Identities=18% Similarity=0.187 Sum_probs=76.2
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+|+++.+ ++..++++++|...- -.+++||+++|+|+|+-.. ......+ ++-+.|..+...
T Consensus 288 ~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i-~~~~~G~l~~~~- 361 (407)
T cd04946 288 NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIV-DNGGNGLLLSKD- 361 (407)
T ss_pred CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHh-cCCCcEEEeCCC-
Confidence 45788899999764 444445555776553 4579999999999998654 3355566 465588887654
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLI 431 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~ 431 (439)
.+.++++++|.++++|++..++|+++|++.-+ +--+.+...++|+
T Consensus 362 -------~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~-------~~f~~~~~~~~~~ 406 (407)
T cd04946 362 -------PTPNELVSSLSKFIDNEEEYQTMREKAREKWE-------ENFNASKNYREFA 406 (407)
T ss_pred -------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHhHHHhc
Confidence 67999999999999987555556655555443 3444445555543
No 95
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.21 E-value=0.25 Score=48.59 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=67.4
Q ss_pred CCCeEEEeec--chh---hhhccCCcceeeecC---Ch-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 300 GRGLLIRGWA--PQV---VILSHPTVGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~--p~~---~ll~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
..++.+.++. ++. .++..+++ ++.-+ |. .++.||+++|+|+|+....+ ....+ +.-..|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 4567777776 332 45666676 77543 33 38999999999999876432 23345 3545666543
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
+.+.++.+|.+++++++..+++.+++++...+ .-+.....+++++.+.
T Consensus 323 ----------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~-------~~s~~~~~~~~~~~~~ 370 (372)
T cd03792 323 ----------TVEEAAVRILYLLRDPELRRKMGANAREHVRE-------NFLITRHLKDYLYLIS 370 (372)
T ss_pred ----------CcHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHH
Confidence 24567789999998764445555555553321 2333455555555544
No 96
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.12 E-value=0.062 Score=52.64 Aligned_cols=106 Identities=22% Similarity=0.300 Sum_probs=63.2
Q ss_pred hhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccc-cchhhhHHHHHHHhceeEEec---ccCCC---cccCCCCHH
Q 038151 311 QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF-ADQFCNEKLVVQVLRIGVSIG---AERPL---HLADEVKKE 383 (439)
Q Consensus 311 ~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~-~DQ~~na~rv~~~~G~G~~~~---~~~~~---~~~~~~~~~ 383 (439)
-.+++..+++ .+.-+| -.|+|+..+|+|+|++=-. .=....|+++. +... +.+. .++.. -.-++.|++
T Consensus 254 ~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lv-k~~~-isL~Niia~~~v~PEliQ~~~~~~ 328 (373)
T PF02684_consen 254 SYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLV-KVKY-ISLPNIIAGREVVPELIQEDATPE 328 (373)
T ss_pred hHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhh-cCCE-eechhhhcCCCcchhhhcccCCHH
Confidence 3456777777 666665 4589999999999987322 11244555553 3221 1110 00000 001258999
Q ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHH
Q 038151 384 AVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSL 425 (439)
Q Consensus 384 ~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~ 425 (439)
.|.+++..+++|+ ..++..+...+++++..+.|.++..
T Consensus 329 ~i~~~~~~ll~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (373)
T PF02684_consen 329 NIAAELLELLENP----EKRKKQKELFREIRQLLGPGASSRA 366 (373)
T ss_pred HHHHHHHHHhcCH----HHHHHHHHHHHHHHHhhhhccCCHH
Confidence 9999999999987 4455555666666666555555443
No 97
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=97.11 E-value=0.41 Score=48.89 Aligned_cols=79 Identities=11% Similarity=-0.032 Sum_probs=51.9
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeecC---Chh-hHHHHHHcCCCEeccccccchhhhHHHHHHHh------ceeE
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTHC---GWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL------RIGV 366 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~Hg---G~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~------G~G~ 366 (439)
+.++.+....+.. .++..+++ ++.-. |.| +.+||+++|+|.|+....+ ....+ +.- +.|.
T Consensus 345 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~ 417 (473)
T TIGR02095 345 PGNVRVIIGYDEALAHLIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGF 417 (473)
T ss_pred CCcEEEEEcCCHHHHHHHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceE
Confidence 3556665555543 35666676 76532 444 7889999999999876532 22223 232 6777
Q ss_pred EecccCCCcccCCCCHHHHHHHHHHhhc
Q 038151 367 SIGAERPLHLADEVKKEAVEKAVNMLMD 394 (439)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 394 (439)
.++. .+++++.++|.+++.
T Consensus 418 l~~~---------~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 418 LFEE---------YDPGALLAALSRALR 436 (473)
T ss_pred EeCC---------CCHHHHHHHHHHHHH
Confidence 7754 568899999999886
No 98
>PRK00654 glgA glycogen synthase; Provisional
Probab=97.03 E-value=0.34 Score=49.43 Aligned_cols=67 Identities=15% Similarity=0.108 Sum_probs=44.6
Q ss_pred hhhccCCcceeeec---CChh-hHHHHHHcCCCEeccccccchhhhHHHHH-----HHhceeEEecccCCCcccCCCCHH
Q 038151 313 VILSHPTVGGFLTH---CGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVV-----QVLRIGVSIGAERPLHLADEVKKE 383 (439)
Q Consensus 313 ~ll~~~~~~~~I~H---gG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~-----~~~G~G~~~~~~~~~~~~~~~~~~ 383 (439)
.++..+++ +|.- -|+| +.+||+++|+|.|+.-..+ ....+. ...+.|..++. -+++
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG----~~e~v~~~~~~~~~~~G~lv~~---------~d~~ 416 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGG----LADTVIDYNPEDGEATGFVFDD---------FNAE 416 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCC----ccceeecCCCCCCCCceEEeCC---------CCHH
Confidence 35666777 7753 3444 7889999999999875432 111220 12267877755 5689
Q ss_pred HHHHHHHHhhc
Q 038151 384 AVEKAVNMLMD 394 (439)
Q Consensus 384 ~l~~ai~~vl~ 394 (439)
++.++|.++++
T Consensus 417 ~la~~i~~~l~ 427 (466)
T PRK00654 417 DLLRALRRALE 427 (466)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 99
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.00 E-value=0.14 Score=49.45 Aligned_cols=110 Identities=20% Similarity=0.298 Sum_probs=65.6
Q ss_pred hhccCCcceeeecCChhhHHHHHHcCCCEeccccccc--hhhhHHHHHHHhc--------eeEEecccCCCcccCCCCHH
Q 038151 314 ILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFAD--QFCNEKLVVQVLR--------IGVSIGAERPLHLADEVKKE 383 (439)
Q Consensus 314 ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~D--Q~~na~rv~~~~G--------~G~~~~~~~~~~~~~~~~~~ 383 (439)
.+..+++ .+.-+|- -++|+..+|+|||+.=- .+ -.+.++++. ... +|..+-++- . ..+.+++
T Consensus 261 a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk-~~~it~~iak~lv-k~~yisLpNIi~~~~ivPEl-i--q~~~~pe 332 (381)
T COG0763 261 AFAAADA--ALAASGT-ATLEAALAGTPMVVAYK-VKPITYFIAKRLV-KLPYVSLPNILAGREIVPEL-I--QEDCTPE 332 (381)
T ss_pred HHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEe-ccHHHHHHHHHhc-cCCcccchHHhcCCccchHH-H--hhhcCHH
Confidence 4555666 6666663 47899999999998621 11 122333332 222 121111100 0 1258899
Q ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 384 AVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 384 ~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
.|.+++..++.|++...++++...+|+..++ .+++++...+.+++.+.
T Consensus 333 ~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 333 NLARALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLELLL 380 (381)
T ss_pred HHHHHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHHhc
Confidence 9999999999987444556666666655544 46688888777776553
No 100
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.00 E-value=0.0082 Score=60.02 Aligned_cols=113 Identities=19% Similarity=0.214 Sum_probs=76.0
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeec---------CCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeE
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTH---------CGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGV 366 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~H---------gG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~ 366 (439)
.+++.+.+|+++.+ ++..+++ +|.- -|. .+++||+++|+|+|+-... .....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----Cchhhh-cCCCceE
Confidence 56799999998764 5666777 6653 344 4689999999999997543 234455 4555787
Q ss_pred EecccCCCcccCCCCHHHHHHHHHHhhc-CCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 367 SIGAERPLHLADEVKKEAVEKAVNMLMD-EGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
.++. -+.++++++|.++++ |+++.+++.+++++..+. -=+.+...+++.+.+.
T Consensus 351 lv~~---------~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~-------~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 351 LVPE---------NDAQALAQRLAAFSQLDTDELAPVVKRAREKVET-------DFNQQVINRELASLLQ 404 (406)
T ss_pred EeCC---------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHh
Confidence 7754 569999999999998 775555666666554332 3333455555555443
No 101
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=96.98 E-value=0.058 Score=53.08 Aligned_cols=74 Identities=16% Similarity=0.189 Sum_probs=50.5
Q ss_pred CCCeEEEeecc---hhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhcee-EEecccCCCc
Q 038151 300 GRGLLIRGWAP---QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIG-VSIGAERPLH 375 (439)
Q Consensus 300 ~~~~~v~~~~p---~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G-~~~~~~~~~~ 375 (439)
.+++.+.+-++ ...++.++++ +|+.++.|. .||.+.|+|+|.+ ++.+. -+ ..|.- +.+ .
T Consensus 261 ~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l---~~R~e---~~--~~g~nvl~v--g---- 323 (365)
T TIGR03568 261 HPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINI---GTRQK---GR--LRADSVIDV--D---- 323 (365)
T ss_pred CCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEee---cCCch---hh--hhcCeEEEe--C----
Confidence 46788776544 4567888888 999886665 9999999999977 33221 11 22322 223 2
Q ss_pred ccCCCCHHHHHHHHHHhhc
Q 038151 376 LADEVKKEAVEKAVNMLMD 394 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~ 394 (439)
.++++|.++++++++
T Consensus 324 ----~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 324 ----PDKEEIVKAIEKLLD 338 (365)
T ss_pred ----CCHHHHHHHHHHHhC
Confidence 568999999999654
No 102
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.86 E-value=0.61 Score=46.82 Aligned_cols=80 Identities=16% Similarity=0.054 Sum_probs=53.7
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecC---Ch-hhHHHHHHcCCCEeccccccchhhhHHHHHH---HhceeEEec
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQ---VLRIGVSIG 369 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~---~~G~G~~~~ 369 (439)
.+++.+.+++++.+ +|..+++ +|+-. |. .++.||+++|+|+|+.-..+.- ...+ + .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv-~~~~~g~~G~l~- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIV-VPWDGGPTGFLA- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hhee-eccCCCCceEEe-
Confidence 46888999988654 6666776 66422 22 3789999999999986543321 1112 2 23466553
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcCC
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
.++++++++|.++++++
T Consensus 377 ----------~d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 ----------STAEEYAEAIEKILSLS 393 (419)
T ss_pred ----------CCHHHHHHHHHHHHhCC
Confidence 25889999999999865
No 103
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.82 E-value=0.0028 Score=54.83 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=68.5
Q ss_pred CCCeEEEeecch---hhhhccCCcceeeec----CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQ---VVILSHPTVGGFLTH----CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~---~~ll~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.++.++ ..++..+++ +|+. |...++.||+++|+|+|+.- ...+...+ .....|..++.
T Consensus 72 ~~~i~~~~~~~~~~l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~~-- 142 (172)
T PF00534_consen 72 KENIIFLGYVPDDELDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFDP-- 142 (172)
T ss_dssp GTTEEEEESHSHHHHHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEEST--
T ss_pred ccccccccccccccccccccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeCC--
Confidence 568888899872 357777777 7776 55679999999999999854 45566666 56677888865
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKE 408 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~ 408 (439)
.+.+++.++|.++++++++.+.+.+++++
T Consensus 143 -------~~~~~l~~~i~~~l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 143 -------NDIEELADAIEKLLNDPELRQKLGKNARE 171 (172)
T ss_dssp -------TSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHCCHHHHHHHHHHhcC
Confidence 57999999999999887555566666654
No 104
>PLN02275 transferase, transferring glycosyl groups
Probab=96.81 E-value=0.6 Score=45.97 Aligned_cols=76 Identities=18% Similarity=0.296 Sum_probs=51.8
Q ss_pred CCCeEEEe-ecchhh---hhccCCcceeee-c-----CC-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEe
Q 038151 300 GRGLLIRG-WAPQVV---ILSHPTVGGFLT-H-----CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSI 368 (439)
Q Consensus 300 ~~~~~v~~-~~p~~~---ll~~~~~~~~I~-H-----gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~ 368 (439)
-.|+++.+ |+++.+ ++..+++ +|. + -| -+++.||+++|+|+|+... ..+...+ ++-+.|..+
T Consensus 285 l~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv-~~g~~G~lv 357 (371)
T PLN02275 285 LRHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELV-KDGKNGLLF 357 (371)
T ss_pred CCceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHc-cCCCCeEEE
Confidence 35666655 787654 4777777 663 1 12 2479999999999999753 2355566 566688876
Q ss_pred cccCCCcccCCCCHHHHHHHHHHhh
Q 038151 369 GAERPLHLADEVKKEAVEKAVNMLM 393 (439)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~ai~~vl 393 (439)
+ ++++++++|.+++
T Consensus 358 ~-----------~~~~la~~i~~l~ 371 (371)
T PLN02275 358 S-----------SSSELADQLLELL 371 (371)
T ss_pred C-----------CHHHHHHHHHHhC
Confidence 3 2688888888764
No 105
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.76 E-value=0.6 Score=45.34 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=74.7
Q ss_pred CCCeEEEe---ecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 300 GRGLLIRG---WAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 300 ~~~~~v~~---~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
.+++.+.+ |.+...++.++.+ ++|-+| |..-||-..|+|.+++=..-+++. ++ +.|.-+.+.
T Consensus 261 ~~~v~li~pl~~~~f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v--~agt~~lvg------- 325 (383)
T COG0381 261 VERVKLIDPLGYLDFHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV--EAGTNILVG------- 325 (383)
T ss_pred CCcEEEeCCcchHHHHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce--ecCceEEeC-------
Confidence 34566554 4566778888888 999998 568899999999999988888887 33 445555553
Q ss_pred cCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q 038151 377 ADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDI 434 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~ 434 (439)
.+.+.|.+++..+++++ +..+|-+..... -++|.+|.+.++.+..+.
T Consensus 326 ---~~~~~i~~~~~~ll~~~----~~~~~m~~~~np----Ygdg~as~rIv~~l~~~~ 372 (383)
T COG0381 326 ---TDEENILDAATELLEDE----EFYERMSNAKNP----YGDGNASERIVEILLNYF 372 (383)
T ss_pred ---ccHHHHHHHHHHHhhCh----HHHHHHhcccCC----CcCcchHHHHHHHHHHHh
Confidence 55799999999999876 444433222222 244556666666555443
No 106
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=96.73 E-value=0.014 Score=57.72 Aligned_cols=114 Identities=12% Similarity=0.093 Sum_probs=72.6
Q ss_pred CCCeEEEeecchhh---hhccCCcceeeecC----Ch-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLTHC----GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~Hg----G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
+.++.+.+++++.+ ++..+++ +|... |. .++.||+++|+|+|+.... .+...+ +.-..|..+...
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv-~~~~~G~~l~~~ 328 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFV-LEGITGYHLAEP 328 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhc-ccCCceEEEeCC
Confidence 46788889987644 5777777 66533 33 4778999999999997653 234445 455567655433
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQ 436 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~ 436 (439)
.++++++++|.++++|++ ..++.+++ ++.+.+-=+-+...+++.+.+.+
T Consensus 329 --------~d~~~la~~I~~ll~d~~-~~~~~~~a-------r~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 329 --------MTSDSIISDINRTLADPE-LTQIAEQA-------KDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred --------CCHHHHHHHHHHHHcCHH-HHHHHHHH-------HHHHHHhCCHHHHHHHHHHHHHH
Confidence 679999999999998762 12333333 33322234444555566655543
No 107
>PLN02949 transferase, transferring glycosyl groups
Probab=96.64 E-value=0.95 Score=46.04 Aligned_cols=114 Identities=13% Similarity=0.017 Sum_probs=67.7
Q ss_pred CCCeEEEeecchhh---hhccCCcceeee---cCChh-hHHHHHHcCCCEeccccccchhhhHHHHHHH-hc-eeEEecc
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFLT---HCGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQV-LR-IGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I~---HgG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~-~G-~G~~~~~ 370 (439)
.+++.+.+++++.+ ++..+++ +|+ +-|+| ++.||+++|+|+|+....+--. ..+.+. .| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 56888989997654 5666766 663 23445 7999999999999986543110 011000 01 23222
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcC-CCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDE-GGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQR 437 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~ 437 (439)
-+.++++++|.+++++ +++.+++.+++++..++ =|.+...+++.+.+.++
T Consensus 407 ---------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~--------FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 407 ---------TTVEEYADAILEVLRMRETERLEIAAAARKRANR--------FSEQRFNEDFKDAIRPI 457 (463)
T ss_pred ---------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--------cCHHHHHHHHHHHHHHH
Confidence 2588999999999974 33344566666554433 23335555555555443
No 108
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=96.48 E-value=1.2 Score=45.36 Aligned_cols=83 Identities=11% Similarity=-0.007 Sum_probs=49.9
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeec---CCh-hhHHHHHHcCCCEecccccc--chhhhHHHHHHHhceeEEecc
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTH---CGW-NSVLEAVSNGLPMVTWPFFA--DQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~H---gG~-gs~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~~G~G~~~~~ 370 (439)
..++.+..-.++. .++..+++ ++.- -|. .+.+||+++|+|+|+....+ |.-.+...- ..-|.|..++.
T Consensus 350 ~~~v~~~~~~~~~~~~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~~ 426 (476)
T cd03791 350 PGRVAVLIGYDEALAHLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFEG 426 (476)
T ss_pred CCcEEEEEeCCHHHHHHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeCC
Confidence 4566654333332 35666666 6643 123 36789999999999876532 111111001 12347877755
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhc
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMD 394 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~ 394 (439)
.+++++.+++.++++
T Consensus 427 ---------~~~~~l~~~i~~~l~ 441 (476)
T cd03791 427 ---------YNADALLAALRRALA 441 (476)
T ss_pred ---------CCHHHHHHHHHHHHH
Confidence 568999999999885
No 109
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.47 E-value=0.014 Score=56.70 Aligned_cols=110 Identities=13% Similarity=0.236 Sum_probs=75.8
Q ss_pred CCCeEEEeecchhhhhcc--CCcceeeecC-------Ch------hhHHHHHHcCCCEeccccccchhhhHHHHHHHhce
Q 038151 300 GRGLLIRGWAPQVVILSH--PTVGGFLTHC-------GW------NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRI 364 (439)
Q Consensus 300 ~~~~~v~~~~p~~~ll~~--~~~~~~I~Hg-------G~------gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~ 364 (439)
..|+.+.+|+++.++..+ .+.+.+...- .+ +-+.+++++|+|+|++. +...+..+ ++.++
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V-~~~~~ 280 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI-VENGL 280 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH-HhCCc
Confidence 468999999998765432 1333222211 11 12677899999999964 46677888 69999
Q ss_pred eEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038151 365 GVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLI 431 (439)
Q Consensus 365 G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~ 431 (439)
|+.++ + .+++.+++..+. .++.++|++|++++++++++ |.-....+++++
T Consensus 281 G~~v~-~----------~~el~~~l~~~~--~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~ 330 (333)
T PRK09814 281 GFVVD-S----------LEELPEIIDNIT--EEEYQEMVENVKKISKLLRN----GYFTKKALVDAI 330 (333)
T ss_pred eEEeC-C----------HHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHH
Confidence 99985 2 467888888753 45677899999999999884 445444444444
No 110
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=96.46 E-value=0.012 Score=57.24 Aligned_cols=96 Identities=15% Similarity=0.126 Sum_probs=65.8
Q ss_pred hcCCCeEEEeecchh---hhhccCCcceeeecCChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCC
Q 038151 298 IEGRGLLIRGWAPQV---VILSHPTVGGFLTHCGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERP 373 (439)
Q Consensus 298 ~~~~~~~v~~~~p~~---~ll~~~~~~~~I~HgG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 373 (439)
...+|+.+.+++++. .++..+++-.+-+.-|+| ++.||+++|+|+|+....+ ....+ ++-+.|..++.
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~~--- 310 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFEE--- 310 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeCC---
Confidence 346899999999975 467677773222344444 5679999999999986533 33345 35567887755
Q ss_pred CcccCCCCHHHHHHHHHHhhcCC-CccHHHHHHHH
Q 038151 374 LHLADEVKKEAVEKAVNMLMDEG-GEGDERRRRAK 407 (439)
Q Consensus 374 ~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~r~~a~ 407 (439)
-+++.++++|..+++|+ +..+.++++++
T Consensus 311 ------~~~~~la~~i~~l~~~~~~~~~~~~~~~~ 339 (351)
T cd03804 311 ------QTVESLAAAVERFEKNEDFDPQAIRAHAE 339 (351)
T ss_pred ------CCHHHHHHHHHHHHhCcccCHHHHHHHHH
Confidence 46888999999999876 33344444443
No 111
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=95.86 E-value=0.025 Score=55.56 Aligned_cols=102 Identities=17% Similarity=0.230 Sum_probs=70.5
Q ss_pred CCCeEEEeecchh-hhhccCCcceeeecC-C-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 300 GRGLLIRGWAPQV-VILSHPTVGGFLTHC-G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 300 ~~~~~v~~~~p~~-~ll~~~~~~~~I~Hg-G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
..++.+.++.++. .++..+++-.+.++. | -.++.||+++|+|+|+..... .....+ +.-..|..++.
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~~------ 329 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVPK------ 329 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeCC------
Confidence 4577777766553 577777773344432 3 458999999999999965321 123445 35567777754
Q ss_pred cCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q 038151 377 ADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAK 414 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 414 (439)
-+.++++++|..+++|++..+++.+++++.++.+.
T Consensus 330 ---~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s 364 (372)
T cd04949 330 ---GDIEALAEAIIELLNDPKLLQKFSEAAYENAERYS 364 (372)
T ss_pred ---CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 56999999999999988666777777777655443
No 112
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.83 E-value=0.1 Score=51.24 Aligned_cols=112 Identities=16% Similarity=0.130 Sum_probs=70.1
Q ss_pred CCeEEEeecch-hhhhccCCcceeee--c--CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCc
Q 038151 301 RGLLIRGWAPQ-VVILSHPTVGGFLT--H--CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 301 ~~~~v~~~~p~-~~ll~~~~~~~~I~--H--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
.++.+.++..+ ..++..+++ +|. + |--.+++||+++|+|+|+-... .+...+ +.-..|..++.
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i-~~~~~g~~~~~----- 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELV-QHGVTGALVPP----- 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHh-cCCCceEEeCC-----
Confidence 45555555443 367777887 663 2 3356899999999999997653 344455 45556777754
Q ss_pred ccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 376 LADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
-+.++++++|.+++++++....+.+++++.. ..-=+.....++..+...
T Consensus 323 ----~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~-------~~~fs~~~~~~~~~~~y~ 371 (374)
T TIGR03088 323 ----GDAVALARALQPYVSDPAARRAHGAAGRARA-------EQQFSINAMVAAYAGLYD 371 (374)
T ss_pred ----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHH
Confidence 4689999999999987644444444544433 223344455555554433
No 113
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.78 E-value=0.074 Score=54.36 Aligned_cols=95 Identities=17% Similarity=0.189 Sum_probs=66.0
Q ss_pred CCCeEEEeecchhhhhccCCcceeeecC----ChhhHHHHHHcCCCEeccccccchhhhHHHHHHHh-----c-eeEEec
Q 038151 300 GRGLLIRGWAPQVVILSHPTVGGFLTHC----GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL-----R-IGVSIG 369 (439)
Q Consensus 300 ~~~~~v~~~~p~~~ll~~~~~~~~I~Hg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~-----G-~G~~~~ 369 (439)
..++.+.+...-..++..+++ +|.-. --.++.||+++|+|+|+- |.......+ +.. | .|..++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHh-cCCcccccCCceEEEC
Confidence 468888885555667877777 66443 245899999999999995 334445555 342 2 676665
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
. .++++++++|.++++|++..+++.+++++..
T Consensus 426 ~---------~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v 457 (475)
T cd03813 426 P---------ADPEALARAILRLLKDPELRRAMGEAGRKRV 457 (475)
T ss_pred C---------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 4 5689999999999998755555655555433
No 114
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=95.68 E-value=0.03 Score=45.52 Aligned_cols=66 Identities=17% Similarity=0.260 Sum_probs=48.4
Q ss_pred CeEEEeecch---hhhhccCCcceeeecCChhhHHHHHHcCCCEeccccc--------cchhhhHHHHHHHhceeEEecc
Q 038151 302 GLLIRGWAPQ---VVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF--------ADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 302 ~~~v~~~~p~---~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~--------~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
+..+.+|.-. ..+...+++ +|+|+|.||++.+++.++|.|++|-- ..|-..|..++ +.+.=+...+
T Consensus 47 gl~v~~F~~~~kiQsli~darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kla-e~~~vv~~sp 123 (161)
T COG5017 47 GLRVYGFDKEEKIQSLIHDARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLA-EINYVVACSP 123 (161)
T ss_pred ccEEEeechHHHHHHHhhcceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHH-hcCceEEEcC
Confidence 3455555432 234444566 99999999999999999999999953 35788888885 7777666653
No 115
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.58 E-value=0.46 Score=42.21 Aligned_cols=50 Identities=22% Similarity=0.198 Sum_probs=36.0
Q ss_pred CCCeEEEeecch-h--h-hhccCCcceeeecCC----hhhHHHHHHcCCCEeccccccch
Q 038151 300 GRGLLIRGWAPQ-V--V-ILSHPTVGGFLTHCG----WNSVLEAVSNGLPMVTWPFFADQ 351 (439)
Q Consensus 300 ~~~~~v~~~~p~-~--~-ll~~~~~~~~I~HgG----~gs~~eal~~GvP~v~~P~~~DQ 351 (439)
..|+.+.++++. . . ++..+++ +++-.. .+++.||+++|+|+|+-+..+.+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 568888888632 2 2 3333555 888776 68999999999999998875433
No 116
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=95.41 E-value=0.15 Score=52.39 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=68.9
Q ss_pred CCCeEEEeecchhhhhccCCcceeee---cCCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEeccc-CCC
Q 038151 300 GRGLLIRGWAPQVVILSHPTVGGFLT---HCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAE-RPL 374 (439)
Q Consensus 300 ~~~~~v~~~~p~~~ll~~~~~~~~I~---HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~-~~~ 374 (439)
..++.+.++.+...++..+++ +|. .-|+ .+++||+++|+|+|+.-..+ .....+ +.-.-|..++.. +.+
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCcccc
Confidence 466788888877788888888 665 3344 48999999999999975421 133344 354567777532 000
Q ss_pred cccCCCC-HHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q 038151 375 HLADEVK-KEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAK 414 (439)
Q Consensus 375 ~~~~~~~-~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 414 (439)
. .-+ .++++++|.++++ +++..+|.++|++.++.+.
T Consensus 449 d---~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs 485 (500)
T TIGR02918 449 D---EDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFL 485 (500)
T ss_pred c---hhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcC
Confidence 0 012 7889999999995 4455667777777655443
No 117
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=94.80 E-value=4.5 Score=39.76 Aligned_cols=79 Identities=20% Similarity=0.112 Sum_probs=51.5
Q ss_pred CCCeEEEeecchhh---hhccCCcceee------ecCCh-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEec
Q 038151 300 GRGLLIRGWAPQVV---ILSHPTVGGFL------THCGW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIG 369 (439)
Q Consensus 300 ~~~~~v~~~~p~~~---ll~~~~~~~~I------~HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~ 369 (439)
.+|+.+.+++++.+ .+.++++..+- +.++. +.+.|++++|+|+|+.++ ...+ +..+.+..+
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~~~~~~- 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYEDEVVLI- 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcCcEEEe-
Confidence 57999999998655 56667763221 22333 358999999999998763 2223 233323332
Q ss_pred ccCCCcccCCCCHHHHHHHHHHhhcCC
Q 038151 370 AERPLHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 370 ~~~~~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
. -+.+++.++|.+++.++
T Consensus 324 ~---------~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 324 A---------DDPEEFVAAIEKALLED 341 (373)
T ss_pred C---------CCHHHHHHHHHHHHhcC
Confidence 2 46899999999977543
No 118
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=94.47 E-value=0.31 Score=48.97 Aligned_cols=117 Identities=21% Similarity=0.269 Sum_probs=55.0
Q ss_pred eccCCCceEEEEeCCCcchhhhhhhchhhHHHH-hcCCCeEEEeecchhh---hhccCCcce-eeecCChhhHHHHHHcC
Q 038151 265 LEATKKPFIWVVRAGDKTKELEEWLSEEKFEER-IEGRGLLIRGWAPQVV---ILSHPTVGG-FLTHCGWNSVLEAVSNG 339 (439)
Q Consensus 265 l~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~v~~~~p~~~---ll~~~~~~~-~I~HgG~gs~~eal~~G 339 (439)
++..+...+|..+..... +.. +-..+.+. ...+.+++.++.++.+ .+...++.+ -...+|..|++|||++|
T Consensus 309 L~~vP~S~L~L~~~~~~~---~~~-l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmG 384 (468)
T PF13844_consen 309 LKAVPNSRLWLLRFPASG---EAR-LRRRFAAHGVDPDRIIFSPVAPREEHLRRYQLADICLDTFPYNGGTTTLDALWMG 384 (468)
T ss_dssp HHHSTTEEEEEEETSTTH---HHH-HHHHHHHTTS-GGGEEEEE---HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT
T ss_pred HHhCCCcEEEEeeCCHHH---HHH-HHHHHHHcCCChhhEEEcCCCCHHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcC
Confidence 666777778887654321 010 11112111 1356677777766543 333355421 23467889999999999
Q ss_pred CCEeccccccch-hhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCC
Q 038151 340 LPMVTWPFFADQ-FCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 340 vP~v~~P~~~DQ-~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
||+|..|--.=. -.-+..+ ..+|+.-.+-.+ ..+-+..|++ +-+|+
T Consensus 385 VPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA~s---------~~eYv~~Av~-La~D~ 431 (468)
T PF13844_consen 385 VPVVTLPGETMASRVGASIL-RALGLPELIADS---------EEEYVEIAVR-LATDP 431 (468)
T ss_dssp --EEB---SSGGGSHHHHHH-HHHT-GGGB-SS---------HHHHHHHHHH-HHH-H
T ss_pred CCEEeccCCCchhHHHHHHH-HHcCCchhcCCC---------HHHHHHHHHH-HhCCH
Confidence 999999943222 2334456 588886444222 1344666665 44555
No 119
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=94.14 E-value=0.45 Score=39.28 Aligned_cols=82 Identities=20% Similarity=0.298 Sum_probs=53.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDML 89 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~ 89 (439)
|||+++.-...|+ ..+++.|.++||+|++++.....+..... .++.++.++. +-
T Consensus 1 KIl~i~~~~~~~~---~~~~~~L~~~g~~V~ii~~~~~~~~~~~~--------~~i~~~~~~~-------~~-------- 54 (139)
T PF13477_consen 1 KILLIGNTPSTFI---YNLAKELKKRGYDVHIITPRNDYEKYEII--------EGIKVIRLPS-------PR-------- 54 (139)
T ss_pred CEEEEecCcHHHH---HHHHHHHHHCCCEEEEEEcCCCchhhhHh--------CCeEEEEecC-------CC--------
Confidence 5777777667774 57799999999999999986443222221 2688877642 10
Q ss_pred CCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC
Q 038151 90 PSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI 127 (439)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~ 127 (439)
. .....+ .+. .+.+++++ .+||+|.+..
T Consensus 55 k--~~~~~~-----~~~-~l~k~ik~--~~~DvIh~h~ 82 (139)
T PF13477_consen 55 K--SPLNYI-----KYF-RLRKIIKK--EKPDVIHCHT 82 (139)
T ss_pred C--ccHHHH-----HHH-HHHHHhcc--CCCCEEEEec
Confidence 0 111111 123 66788887 7999998775
No 120
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=93.94 E-value=0.079 Score=43.58 Aligned_cols=80 Identities=24% Similarity=0.340 Sum_probs=49.1
Q ss_pred CCCeEEEeecch-hhhhccCCcceeeec--CC-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCc
Q 038151 300 GRGLLIRGWAPQ-VVILSHPTVGGFLTH--CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 300 ~~~~~v~~~~p~-~~ll~~~~~~~~I~H--gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
.+++.+.+|+++ .+++..+++....+. .| -+++.|++++|+|+|+.+. .....+ +..+.|..+ .
T Consensus 52 ~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~-~~~~~~~~~--~---- 119 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIV-EEDGCGVLV--A---- 119 (135)
T ss_dssp HCTEEEE-S-HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE---T----
T ss_pred CCCEEEcCCHHHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhhe-eecCCeEEE--C----
Confidence 459999999864 356777888554432 23 4899999999999999865 122334 356788777 3
Q ss_pred ccCCCCHHHHHHHHHHhhcC
Q 038151 376 LADEVKKEAVEKAVNMLMDE 395 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~ 395 (439)
-+++++.++|+++++|
T Consensus 120 ----~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 120 ----NDPEELAEAIERLLND 135 (135)
T ss_dssp ----T-HHHHHHHHHHHHH-
T ss_pred ----CCHHHHHHHHHHHhcC
Confidence 5699999999999864
No 121
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=92.62 E-value=0.44 Score=42.29 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=32.5
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
||||+..=-+. +-.=+.+|++.|++.||+|+++++.....-....
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~s 45 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGHS 45 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTTS
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCccee
Confidence 57777766554 5556789999998888999999998776654433
No 122
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=92.56 E-value=1.1 Score=34.01 Aligned_cols=82 Identities=11% Similarity=0.108 Sum_probs=50.5
Q ss_pred cCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhc-eeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHH
Q 038151 326 HCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLR-IGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRR 404 (439)
Q Consensus 326 HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G-~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~ 404 (439)
+|-..-+.|++++|+|+|.-.. ......+ ..| -++.. -+.+++.++|+.+++|+++.+++++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~--~~~~~~~~~-----------~~~~el~~~i~~ll~~~~~~~~ia~ 71 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF--EDGEHIITY-----------NDPEELAEKIEYLLENPEERRRIAK 71 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc--CCCCeEEEE-----------CCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4556689999999999999865 2333223 223 22222 2689999999999998744444444
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038151 405 RAKEYGEMAKRAIEEGGSSSLNIKLLI 431 (439)
Q Consensus 405 ~a~~l~~~~~~~~~~gG~~~~~~~~~~ 431 (439)
++++ .+...-+....++.++
T Consensus 72 ~a~~-------~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 72 NARE-------RVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHH-------HHHHhCCHHHHHHHHH
Confidence 4333 3333555555555544
No 123
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=91.62 E-value=0.17 Score=49.30 Aligned_cols=127 Identities=15% Similarity=0.173 Sum_probs=68.3
Q ss_pred CCceEEEEeCCCcchhhhhhhchhhHHHHhc-CCCeEEEeecc---hhhhhccCCcceeeecCChhhHHHHHHcCCCEec
Q 038151 269 KKPFIWVVRAGDKTKELEEWLSEEKFEERIE-GRGLLIRGWAP---QVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVT 344 (439)
Q Consensus 269 ~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~v~~~~p---~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~ 344 (439)
+.++||.+...+... ..+.+... -+++.+..-++ ...++.++++ +|+..| |-.-||.+.|+|+|.
T Consensus 214 ~~~vi~~~hn~p~~~--------~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs-GI~eEa~~lg~P~v~ 282 (346)
T PF02350_consen 214 NVPVIFPLHNNPRGS--------DIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS-GIQEEAPSLGKPVVN 282 (346)
T ss_dssp TEEEEEE--S-HHHH--------HHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH-HHHHHGGGGT--EEE
T ss_pred CCcEEEEecCCchHH--------HHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc-cHHHHHHHhCCeEEE
Confidence 567888876443221 11112221 14888776654 4568888888 999999 655599999999999
Q ss_pred cccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchH
Q 038151 345 WPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSS 424 (439)
Q Consensus 345 ~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~ 424 (439)
+ .|+...-.-+ ..|..+.+ . .++++|.+++++++++. ....+... ..+-.++|.++.
T Consensus 283 i---R~~geRqe~r--~~~~nvlv--~--------~~~~~I~~ai~~~l~~~----~~~~~~~~----~~npYgdG~as~ 339 (346)
T PF02350_consen 283 I---RDSGERQEGR--ERGSNVLV--G--------TDPEAIIQAIEKALSDK----DFYRKLKN----RPNPYGDGNASE 339 (346)
T ss_dssp C---SSS-S-HHHH--HTTSEEEE--T--------SSHHHHHHHHHHHHH-H----HHHHHHHC----S--TT-SS-HHH
T ss_pred e---cCCCCCHHHH--hhcceEEe--C--------CCHHHHHHHHHHHHhCh----HHHHhhcc----CCCCCCCCcHHH
Confidence 9 3433333323 33444443 3 66999999999999742 23322222 122345566666
Q ss_pred HHHHH
Q 038151 425 LNIKL 429 (439)
Q Consensus 425 ~~~~~ 429 (439)
+.++.
T Consensus 340 rI~~~ 344 (346)
T PF02350_consen 340 RIVEI 344 (346)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65543
No 124
>PRK14098 glycogen synthase; Provisional
Probab=91.40 E-value=2.4 Score=43.54 Aligned_cols=82 Identities=11% Similarity=-0.025 Sum_probs=52.9
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeecC---Ch-hhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
+.++.+.+.++.. .++..+++ ++.-+ |. .+.+||+++|+|.|+....+-........ +.-+.|..++.
T Consensus 361 ~~~V~~~g~~~~~~~~~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~-~~~~~G~l~~~-- 435 (489)
T PRK14098 361 PEQVSVQTEFTDAFFHLAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVS-EDKGSGFIFHD-- 435 (489)
T ss_pred CCCEEEEEecCHHHHHHHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCC-CCCCceeEeCC--
Confidence 4678888888764 46666777 76543 22 26789999999988876533211111111 12456777654
Q ss_pred CCcccCCCCHHHHHHHHHHhh
Q 038151 373 PLHLADEVKKEAVEKAVNMLM 393 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl 393 (439)
.+++++.++|.+++
T Consensus 436 -------~d~~~la~ai~~~l 449 (489)
T PRK14098 436 -------YTPEALVAKLGEAL 449 (489)
T ss_pred -------CCHHHHHHHHHHHH
Confidence 66899999999876
No 125
>PHA01633 putative glycosyl transferase group 1
Probab=90.50 E-value=1.5 Score=42.46 Aligned_cols=101 Identities=14% Similarity=0.125 Sum_probs=59.1
Q ss_pred CCCeEEEe---ecchh---hhhccCCcceeeec---CChh-hHHHHHHcCCCEecccc------ccch------hhhHHH
Q 038151 300 GRGLLIRG---WAPQV---VILSHPTVGGFLTH---CGWN-SVLEAVSNGLPMVTWPF------FADQ------FCNEKL 357 (439)
Q Consensus 300 ~~~~~v~~---~~p~~---~ll~~~~~~~~I~H---gG~g-s~~eal~~GvP~v~~P~------~~DQ------~~na~r 357 (439)
..++.+.+ ++++. .++..+++ +|.- -|+| +++||+++|+|+|+--. .+|+ ..+..-
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 45777764 44433 45666776 7764 3444 68899999999998633 2433 222222
Q ss_pred HHH-HhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHH
Q 038151 358 VVQ-VLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEM 412 (439)
Q Consensus 358 v~~-~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~ 412 (439)
.++ ..|.|..++. .++++++++|.+++...+ .+....++++.+++
T Consensus 278 ~~~~~~g~g~~~~~---------~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~ 323 (335)
T PHA01633 278 YYDKEHGQKWKIHK---------FQIEDMANAIILAFELQD-REERSMKLKELAKK 323 (335)
T ss_pred hcCcccCceeeecC---------CCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHh
Confidence 211 2456666643 789999999999854321 11223444444444
No 126
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=89.78 E-value=4.1 Score=35.24 Aligned_cols=84 Identities=18% Similarity=0.211 Sum_probs=44.8
Q ss_pred hCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCCCCCcCcHHHHHHHHHHhhHHHHHHH
Q 038151 34 KQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDMLPSITLVPKFFSAVEMLQLPLENLF 113 (439)
Q Consensus 34 ~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (439)
++||+|+|++.......- ++++.+.+..+ ... .....+....+..-........+.+.++.
T Consensus 1 q~gh~v~fl~~~~~~~~~-----------~GV~~~~y~~~-------~~~-~~~~~~~~~~~e~~~~rg~av~~a~~~L~ 61 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP-----------PGVRVVRYRPP-------RGP-TPGTHPYVRDFEAAVLRGQAVARAARQLR 61 (171)
T ss_pred CCCCEEEEEecCCCCCCC-----------CCcEEEEeCCC-------CCC-CCCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence 479999999855332211 26777766321 111 00001111112222222334556666665
Q ss_pred HhcCCCCeEEEEeC----------CC-CcccEEEe
Q 038151 114 REIQPKPSCLISDI----------KF-NVPRIVFH 137 (439)
Q Consensus 114 ~~~~~~pd~vv~D~----------~l-giP~v~~~ 137 (439)
++ ++.||+|+.+. .+ ++|.+.++
T Consensus 62 ~~-Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 62 AQ-GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred Hc-CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 55 78999999999 23 66766663
No 127
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=88.76 E-value=2.9 Score=38.64 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=37.9
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEe
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEF 70 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 70 (439)
++||||+..=-+. |.--+.+|++.|++.| +|+++++...+.-...++. ....+++..+
T Consensus 4 ~~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait----~~~pl~~~~~ 61 (257)
T PRK13932 4 KKPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHSGMSHAMT----LGVPLRIKEY 61 (257)
T ss_pred CCCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCCCCccccc----CCCCeEEEEE
Confidence 6899987765332 2245778999998888 7999998876665444322 1234666554
No 128
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=88.31 E-value=1.9 Score=35.83 Aligned_cols=49 Identities=16% Similarity=0.078 Sum_probs=42.1
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVI 55 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~ 55 (439)
++.+||+.+.+..+|-.-..-++..|+.+|++|+++...--.+.+.+..
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a 50 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAA 50 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 5789999999999999999999999999999999998775555554443
No 129
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=88.21 E-value=7.3 Score=40.32 Aligned_cols=64 Identities=22% Similarity=0.210 Sum_probs=46.0
Q ss_pred CCCeEEEeecchh-hhhccCCcceeeec---CC-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 300 GRGLLIRGWAPQV-VILSHPTVGGFLTH---CG-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 300 ~~~~~v~~~~p~~-~ll~~~~~~~~I~H---gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
.+++.+.+|..+. .++..+++ +|.. -| -+++.||+++|+|+|+... ..+...+ +.-..|..++.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV-~dG~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECF-IEGVSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHc-ccCCcEEEECC
Confidence 4788888886543 56777887 8753 45 4589999999999998765 3445556 46567877765
No 130
>PHA01630 putative group 1 glycosyl transferase
Probab=86.23 E-value=1.1 Score=43.40 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=25.2
Q ss_pred EEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 12 VLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 12 l~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
++.-+|-..++.----+-++|...|++|+++-.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 36 (331)
T PHA01630 3 LVRDYPDHSFVRQKKLLEEHLKMLGHKVTVFEKP 36 (331)
T ss_pred EEEEccccchHHHHHHHHHHHHHhCCeeEEEecc
Confidence 4445566666666666778899999999999766
No 131
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=85.65 E-value=11 Score=38.55 Aligned_cols=111 Identities=22% Similarity=0.270 Sum_probs=64.9
Q ss_pred eccCCCceEEEEeCCCcchhhhhhhchhhHHHH--hcCCCeEEEeecchhh---hhccCCcceeee---cCChhhHHHHH
Q 038151 265 LEATKKPFIWVVRAGDKTKELEEWLSEEKFEER--IEGRGLLIRGWAPQVV---ILSHPTVGGFLT---HCGWNSVLEAV 336 (439)
Q Consensus 265 l~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~v~~~~p~~~---ll~~~~~~~~I~---HgG~gs~~eal 336 (439)
+...+-.++|..+.+++...... +- ..-++ +....+++.+-.|... =+..+++ |.. -||+-|+.|+|
T Consensus 454 L~~vP~Svl~L~~~~~~~~~~~~--l~-~la~~~Gv~~eRL~f~p~~~~~~h~a~~~iADl--vLDTyPY~g~TTa~daL 528 (620)
T COG3914 454 LSAVPNSVLLLKAGGDDAEINAR--LR-DLAEREGVDSERLRFLPPAPNEDHRARYGIADL--VLDTYPYGGHTTASDAL 528 (620)
T ss_pred HHhCCCcEEEEecCCCcHHHHHH--HH-HHHHHcCCChhheeecCCCCCHHHHHhhchhhe--eeecccCCCccchHHHH
Confidence 55667788888877654322111 11 11121 2356667766666443 2333555 654 58999999999
Q ss_pred HcCCCEeccccccchhh--hHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHH
Q 038151 337 SNGLPMVTWPFFADQFC--NEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNM 391 (439)
Q Consensus 337 ~~GvP~v~~P~~~DQ~~--na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~ 391 (439)
..|||++.++ |+||- |+.-++..+|+--.+-. -..+-++++|+-
T Consensus 529 wm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~---------s~~dYV~~av~~ 574 (620)
T COG3914 529 WMGVPVLTRV--GEQFASRNGASIATNAGIPELVAD---------SRADYVEKAVAF 574 (620)
T ss_pred HhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcC---------CHHHHHHHHHHh
Confidence 9999999997 88864 23333245555433321 224557888753
No 132
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=85.59 E-value=2.4 Score=34.10 Aligned_cols=45 Identities=20% Similarity=0.082 Sum_probs=37.4
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
||++.+.+...|.....-++..|++.|++|.+.....-.+.+.+.
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~ 45 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEA 45 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 589999999999999999999999999999988765444444443
No 133
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=85.55 E-value=7.2 Score=39.61 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=63.5
Q ss_pred eecchhh---hhccCCcceeee---cCChh-hHHHHHHcCCC----EeccccccchhhhHHHHHHHhceeEEecccCCCc
Q 038151 307 GWAPQVV---ILSHPTVGGFLT---HCGWN-SVLEAVSNGLP----MVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 307 ~~~p~~~---ll~~~~~~~~I~---HgG~g-s~~eal~~GvP----~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
+.+++.+ ++..+++ ++. +-|+| +..||+++|+| +|+--+.+-. . .++-|+.++.
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~----~l~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----Q----ELNGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----H----HhCCcEEECC-----
Confidence 4455544 4566777 775 44765 77899999999 6666554322 2 2235777755
Q ss_pred ccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Q 038151 376 LADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDI 434 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~ 434 (439)
.+.++++++|.++|+.+. ++.+++.+++.+.+. .-+...-.+.+++++
T Consensus 407 ----~d~~~lA~aI~~aL~~~~--~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 407 ----YDIDGMADAIARALTMPL--EEREERHRAMMDKLR-----KNDVQRWREDFLSDL 454 (456)
T ss_pred ----CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHh
Confidence 679999999999998541 233444444444432 245566666777655
No 134
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=85.31 E-value=4.9 Score=40.39 Aligned_cols=100 Identities=11% Similarity=0.113 Sum_probs=62.7
Q ss_pred hhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEE-ecccCCCcccCCCCHHHHHHHHHH
Q 038151 313 VILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVS-IGAERPLHLADEVKKEAVEKAVNM 391 (439)
Q Consensus 313 ~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~-~~~~~~~~~~~~~~~~~l~~ai~~ 391 (439)
.++.++++ +|..==++ +.-|+.+|+|++.+++ |+ .....+ +.+|..-. ++.+ .++.++|.+.+.+
T Consensus 323 ~iIs~~dl--~ig~RlHa-~I~a~~~gvP~i~i~Y--~~-K~~~~~-~~lg~~~~~~~~~-------~l~~~~Li~~v~~ 388 (426)
T PRK10017 323 KILGACEL--TVGTRLHS-AIISMNFGTPAIAINY--EH-KSAGIM-QQLGLPEMAIDIR-------HLLDGSLQAMVAD 388 (426)
T ss_pred HHHhhCCE--EEEecchH-HHHHHHcCCCEEEeee--hH-HHHHHH-HHcCCccEEechh-------hCCHHHHHHHHHH
Confidence 56666665 77644443 4558899999999997 43 334455 58887744 4444 4889999999999
Q ss_pred hhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Q 038151 392 LMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIM 435 (439)
Q Consensus 392 vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~ 435 (439)
+++|.+ +++++.++--+++++. +.+...++++.|-
T Consensus 389 ~~~~r~---~~~~~l~~~v~~~r~~------~~~~~~~~~~~~~ 423 (426)
T PRK10017 389 TLGQLP---ALNARLAEAVSRERQT------GMQMVQSVLERIG 423 (426)
T ss_pred HHhCHH---HHHHHHHHHHHHHHHH------HHHHHHHHHHHhc
Confidence 998753 4444444444443321 2244455555543
No 135
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=84.89 E-value=4.6 Score=34.96 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=26.1
Q ss_pred EecCCCccCHHHHHHHHHHH-HhC-CCeEEEEeCCCC
Q 038151 13 LFPFLIQGHIIPMIDIARLL-AKQ-GAFVTIVTTPKN 47 (439)
Q Consensus 13 ~~~~p~~GHv~P~l~La~~L-~~~-Gh~V~~~~~~~~ 47 (439)
++-.++-||..-|+.|.+.+ .++ .++..+++..+.
T Consensus 2 l~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~ 38 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDK 38 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCc
Confidence 45568889999999999999 333 566666765544
No 136
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=81.81 E-value=2.8 Score=42.71 Aligned_cols=73 Identities=15% Similarity=0.121 Sum_probs=47.1
Q ss_pred EEeecchhh---hhccCCcceeee---cCChh-hHHHHHHcCCC----EeccccccchhhhHHHHHHHhceeEEecccCC
Q 038151 305 IRGWAPQVV---ILSHPTVGGFLT---HCGWN-SVLEAVSNGLP----MVTWPFFADQFCNEKLVVQVLRIGVSIGAERP 373 (439)
Q Consensus 305 v~~~~p~~~---ll~~~~~~~~I~---HgG~g-s~~eal~~GvP----~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 373 (439)
+.+++++.+ ++..+++ +|. +-|+| ++.||+++|+| +|+--+.+- . +...-|+.++.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~-------~-~~~~~g~lv~p--- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA-------A-EELSGALLVNP--- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc-------h-hhcCCCEEECC---
Confidence 345666654 5666777 664 45655 67899999999 544422211 1 12234566654
Q ss_pred CcccCCCCHHHHHHHHHHhhcCC
Q 038151 374 LHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 374 ~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
.+.++++++|.++++++
T Consensus 412 ------~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 412 ------YDIDEVADAIHRALTMP 428 (460)
T ss_pred ------CCHHHHHHHHHHHHcCC
Confidence 67899999999999865
No 137
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=81.75 E-value=1.9 Score=35.84 Aligned_cols=42 Identities=24% Similarity=0.259 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeC
Q 038151 24 PMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRF 72 (439)
Q Consensus 24 P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (439)
=+..|+++|+++||+|++++........+.. ..+++++.++.
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-------~~~~~~~~~~~ 47 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDEEE-------EDGVRVHRLPL 47 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-SEE-------ETTEEEEEE--
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccccc-------cCCceEEeccC
Confidence 3678999999999999999876544422111 12688887764
No 138
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=81.26 E-value=2 Score=35.24 Aligned_cols=45 Identities=18% Similarity=0.050 Sum_probs=36.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
|||++...|+.+=+. ...+.++|.++|++|.++.++.....+...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 588998888877777 999999999999999999999766666555
No 139
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=80.90 E-value=15 Score=34.07 Aligned_cols=43 Identities=19% Similarity=0.066 Sum_probs=28.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
||||+..=-+. |---+.+|++.|++ +|+|+++++...+.-...
T Consensus 1 M~ILvtNDDGi-~apGl~aL~~~l~~-~~~V~VvAP~~~~Sg~g~ 43 (253)
T PRK13933 1 MNILLTNDDGI-NAEGINTLAELLSK-YHEVIIVAPENQRSASSH 43 (253)
T ss_pred CeEEEEcCCCC-CChhHHHHHHHHHh-CCcEEEEccCCCCccccc
Confidence 46666654222 22237889999975 689999998877664433
No 140
>PLN02501 digalactosyldiacylglycerol synthase
Probab=79.12 E-value=22 Score=37.99 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=50.5
Q ss_pred CeEEEeecchh-hhhccCCcceeeecC---C-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 302 GLLIRGWAPQV-VILSHPTVGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 302 ~~~v~~~~p~~-~ll~~~~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
++.+.++.++. .++...++ ||.-+ | -.+++||+++|+|+|+.-..+... + ..-+-|. + .
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGl-l--~----- 665 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCL-T--Y----- 665 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeE-e--c-----
Confidence 35555666654 47777777 77633 3 458899999999999987754321 2 1222222 2 1
Q ss_pred cCCCCHHHHHHHHHHhhcCC
Q 038151 377 ADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~ 396 (439)
-+.+++.++|.++|.++
T Consensus 666 ---~D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 666 ---KTSEDFVAKVKEALANE 682 (794)
T ss_pred ---CCHHHHHHHHHHHHhCc
Confidence 34899999999999876
No 141
>PLN02939 transferase, transferring glycosyl groups
Probab=79.09 E-value=29 Score=38.37 Aligned_cols=84 Identities=11% Similarity=0.109 Sum_probs=52.1
Q ss_pred CCCeEEEeecchh---hhhccCCcceeeecC---Ch-hhHHHHHHcCCCEecccccc--chhhh--HHHHHHHhceeEEe
Q 038151 300 GRGLLIRGWAPQV---VILSHPTVGGFLTHC---GW-NSVLEAVSNGLPMVTWPFFA--DQFCN--EKLVVQVLRIGVSI 368 (439)
Q Consensus 300 ~~~~~v~~~~p~~---~ll~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~--DQ~~n--a~rv~~~~G~G~~~ 368 (439)
..++.+.++.+.. .++..+++ ||.-+ |+ .+.+||+++|+|.|+....+ |.-.+ ...+.+.-+-|...
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 4578887887764 36766776 77532 22 37899999999999876543 21111 11110122456666
Q ss_pred cccCCCcccCCCCHHHHHHHHHHhhc
Q 038151 369 GAERPLHLADEVKKEAVEKAVNMLMD 394 (439)
Q Consensus 369 ~~~~~~~~~~~~~~~~l~~ai~~vl~ 394 (439)
+. .+++.+..+|.++++
T Consensus 914 ~~---------~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LT---------PDEQGLNSALERAFN 930 (977)
T ss_pred cC---------CCHHHHHHHHHHHHH
Confidence 44 568888888888764
No 142
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=78.72 E-value=4.4 Score=41.84 Aligned_cols=93 Identities=11% Similarity=0.118 Sum_probs=63.1
Q ss_pred CCeEEEeecc--h-hhhhccCCcceeeecC---ChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 301 RGLLIRGWAP--Q-VVILSHPTVGGFLTHC---GWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 301 ~~~~v~~~~p--~-~~ll~~~~~~~~I~Hg---G~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
..+.+.++.. + ...+..+.+ +|.-+ |.++.+||+++|+|+| .......| +...=|..+
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li------ 472 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYII------ 472 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEe------
Confidence 5677878777 3 356776777 88766 6779999999999999 22223344 344445454
Q ss_pred cccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q 038151 375 HLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAK 414 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 414 (439)
-+..+|.++|...|.+.+.-+.+...|-+.+++..
T Consensus 473 -----~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 473 -----DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred -----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 23789999999999987445555555555555443
No 143
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=77.94 E-value=6.6 Score=36.27 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=28.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
||||+..=-+. |--=+.+|++.|++ +|+|+++++...+.-...+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg~g~a 44 (253)
T PRK13935 1 MNILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSATGHA 44 (253)
T ss_pred CeEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCcccccc
Confidence 46666554333 23347788888865 6899999988766654443
No 144
>PLN00142 sucrose synthase
Probab=77.85 E-value=6 Score=42.84 Aligned_cols=72 Identities=13% Similarity=0.137 Sum_probs=47.6
Q ss_pred eeec---CChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHh----hc
Q 038151 323 FLTH---CGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNML----MD 394 (439)
Q Consensus 323 ~I~H---gG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~v----l~ 394 (439)
||.- -|+| ++.||+++|+|+|+-... -....+ +.-.-|..++. -++++++++|.++ ++
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV-~dG~tG~LV~P---------~D~eaLA~aI~~lLekLl~ 735 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEII-VDGVSGFHIDP---------YHGDEAANKIADFFEKCKE 735 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeCC---------CCHHHHHHHHHHHHHHhcC
Confidence 6653 4555 899999999999986543 344455 45556888865 4577777777654 46
Q ss_pred CCCccHHHHHHHHH
Q 038151 395 EGGEGDERRRRAKE 408 (439)
Q Consensus 395 ~~~~~~~~r~~a~~ 408 (439)
|++..++|.+++++
T Consensus 736 Dp~lr~~mg~~Ar~ 749 (815)
T PLN00142 736 DPSYWNKISDAGLQ 749 (815)
T ss_pred CHHHHHHHHHHHHH
Confidence 66444555555543
No 145
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=74.99 E-value=10 Score=30.21 Aligned_cols=47 Identities=19% Similarity=0.206 Sum_probs=37.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVI 55 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~ 55 (439)
.|+++.+.+..-|-.-+..|+..|+++||+|.++-.....+.+.+..
T Consensus 1 ~~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l~~~~ 47 (121)
T PF02310_consen 1 IRVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDANVPPEELVEAL 47 (121)
T ss_dssp -EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHHHHHH
T ss_pred CEEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHHHHHH
Confidence 48999999999999999999999999999999996654444444443
No 146
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=74.71 E-value=7.1 Score=35.89 Aligned_cols=44 Identities=23% Similarity=0.174 Sum_probs=28.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
||||+..=-+ =|.-=+-+|++.|+ .+++|+++++...+.-....
T Consensus 1 mrILlTNDDG-i~a~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~s 44 (252)
T COG0496 1 MRILLTNDDG-IHAPGIRALARALR-EGADVTVVAPDREQSGASHS 44 (252)
T ss_pred CeEEEecCCc-cCCHHHHHHHHHHh-hCCCEEEEccCCCCcccccc
Confidence 3555443321 13334567888888 89999999999776644333
No 147
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=74.33 E-value=11 Score=33.44 Aligned_cols=49 Identities=16% Similarity=0.029 Sum_probs=40.6
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVI 55 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~ 55 (439)
++.||++.+.++..|-....-++..|+..|++|+++...--.+.+.+..
T Consensus 81 ~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~ 129 (201)
T cd02070 81 KKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAV 129 (201)
T ss_pred CCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 3679999999999999999999999999999999987664444444443
No 148
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=73.66 E-value=17 Score=33.62 Aligned_cols=44 Identities=18% Similarity=0.092 Sum_probs=29.6
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
||||+..=-+. |.-=+.+|++.|++. |+|+++++...+.-...+
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~~~qSg~g~a 44 (250)
T PRK00346 1 MRILLTNDDGI-HAPGIRALAEALREL-ADVTVVAPDRERSGASHS 44 (250)
T ss_pred CeEEEECCCCC-CChhHHHHHHHHHhC-CCEEEEeCCCCCcCCccc
Confidence 45665544322 334477899999988 799999998666654443
No 149
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=73.30 E-value=53 Score=30.43 Aligned_cols=81 Identities=20% Similarity=0.335 Sum_probs=52.9
Q ss_pred CCCeEEEeecch---hhhhccCCcceeeec---CChhh-HHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 300 GRGLLIRGWAPQ---VVILSHPTVGGFLTH---CGWNS-VLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 300 ~~~~~v~~~~p~---~~ll~~~~~~~~I~H---gG~gs-~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
..++.+.+++++ ..++..+++ ++.- .|.|. +.||+++|+|++.-.. ......+ ...+.|. +...
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~-~~~~~g~-~~~~- 326 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVV-EDGETGL-LVPP- 326 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHh-cCCCceE-ecCC-
Confidence 477888888882 234555655 6665 35554 5999999999976644 3333333 2333466 4332
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCC
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~ 396 (439)
.+.+.+..++..++++.
T Consensus 327 -------~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 -------GDVEELADALEQLLEDP 343 (381)
T ss_pred -------CCHHHHHHHHHHHhcCH
Confidence 35899999999998864
No 150
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=71.96 E-value=6.1 Score=31.92 Aligned_cols=38 Identities=8% Similarity=-0.035 Sum_probs=25.3
Q ss_pred cEEEEecCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 9 LHFVLFPFLIQG---HIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 9 ~~il~~~~p~~G---Hv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
|||+|+--|-.+ .-.=.++|+.+..+|||+|.++....
T Consensus 1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence 567777666544 23457899999999999999997663
No 151
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=71.28 E-value=15 Score=32.66 Aligned_cols=50 Identities=12% Similarity=-0.134 Sum_probs=42.6
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIE 56 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~ 56 (439)
.+.+|++.+.++..|-....-++.-|+.+|++|+++...--.+.+.+...
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~ 132 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVK 132 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHH
Confidence 45799999999999999999999999999999999987766555555544
No 152
>PLN00142 sucrose synthase
Probab=71.22 E-value=16 Score=39.65 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=23.2
Q ss_pred HHhhHHHHHHH-HhcCCCCeEEEEeC------------CCCcccEEEe
Q 038151 103 EMLQLPLENLF-REIQPKPSCLISDI------------KFNVPRIVFH 137 (439)
Q Consensus 103 ~~~~~~l~~~~-~~~~~~pd~vv~D~------------~lgiP~v~~~ 137 (439)
..+...+.+.+ ++...+||+|.+.. .+|||.+...
T Consensus 391 ~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~ 438 (815)
T PLN00142 391 ETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIA 438 (815)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEc
Confidence 33444444333 33335799999998 8999988763
No 153
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=70.40 E-value=20 Score=32.94 Aligned_cols=56 Identities=16% Similarity=0.089 Sum_probs=34.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEe
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEF 70 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 70 (439)
||||+.-=-+ =|.-=+.+|+++|++.| +|+++++...+.-....... ...+++..+
T Consensus 1 M~ILltNDDG-i~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg~g~ait~----~~pl~~~~~ 56 (244)
T TIGR00087 1 MKILLTNDDG-IHSPGIRALYQALKELG-EVTVVAPARQRSGTGHSLTL----FEPLRVGQV 56 (244)
T ss_pred CeEEEECCCC-CCCHhHHHHHHHHHhCC-CEEEEeCCCCccccccCcCC----CCCeEEEEe
Confidence 4555444322 12334678999999988 89999998776655444221 224666554
No 154
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=70.29 E-value=9.6 Score=31.72 Aligned_cols=41 Identities=22% Similarity=0.138 Sum_probs=37.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKN 47 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~ 47 (439)
.++||++.+.+..||=.-.--+++.|+..|.+|.....-..
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~t 51 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQT 51 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCC
Confidence 58999999999999999999999999999999998865433
No 155
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=68.19 E-value=31 Score=29.56 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=35.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
..|||.+.-.|+.|-..-.+.++..|.+.|+.|-=+-++
T Consensus 4 ~~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~ 42 (179)
T COG1618 4 MAMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITP 42 (179)
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEee
Confidence 368999999999999999999999999999998766555
No 156
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=67.87 E-value=5.9 Score=33.38 Aligned_cols=29 Identities=38% Similarity=0.456 Sum_probs=23.9
Q ss_pred CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 17 LIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 17 p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
...|=-.-++.|+++|+++||+|+++++.
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 34566677899999999999999999877
No 157
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=67.17 E-value=6.1 Score=40.79 Aligned_cols=113 Identities=20% Similarity=0.292 Sum_probs=61.6
Q ss_pred eccCCCceEEEEeCCCcchhhhhhhchhhHHHH--hcCCCeEEEeecchh-----hhhccCCcceeeecCChhhHHHHHH
Q 038151 265 LEATKKPFIWVVRAGDKTKELEEWLSEEKFEER--IEGRGLLIRGWAPQV-----VILSHPTVGGFLTHCGWNSVLEAVS 337 (439)
Q Consensus 265 l~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~v~~~~p~~-----~ll~~~~~~~~I~HgG~gs~~eal~ 337 (439)
+++.+-.++|.++....... . + ....+. ..++.+++..-+... ..|.--.++...|. |+-|.++.|+
T Consensus 783 Lk~VPnS~LwllrfPa~ge~-r---f-~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw 856 (966)
T KOG4626|consen 783 LKRVPNSVLWLLRFPAVGEQ-R---F-RTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLW 856 (966)
T ss_pred HHhCCcceeEEEeccccchH-H---H-HHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcC-Ccccchhhhc
Confidence 66667788999886532110 0 0 011111 135555554333221 12222333445554 5889999999
Q ss_pred cCCCEeccccccchhhh-HHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhh
Q 038151 338 NGLPMVTWPFFADQFCN-EKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLM 393 (439)
Q Consensus 338 ~GvP~v~~P~~~DQ~~n-a~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl 393 (439)
+|+|+|..|--.---.. +..+ ..+|+|-.+-++ ..|-..-+|+-..
T Consensus 857 ~GvPmVTmpge~lAsrVa~Sll-~~~Gl~hliak~---------~eEY~~iaV~Lat 903 (966)
T KOG4626|consen 857 AGVPMVTMPGETLASRVAASLL-TALGLGHLIAKN---------REEYVQIAVRLAT 903 (966)
T ss_pred cCCceeecccHHHHHHHHHHHH-HHcccHHHHhhh---------HHHHHHHHHHhhc
Confidence 99999999974332233 3445 578888655332 2444555665443
No 158
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=66.64 E-value=24 Score=38.58 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=58.1
Q ss_pred hhhccCCcceeeec---CChh-hHHHHHHcCCC---Eeccc-cccchhhhHHHHHHHhc-eeEEecccCCCcccCCCCHH
Q 038151 313 VILSHPTVGGFLTH---CGWN-SVLEAVSNGLP---MVTWP-FFADQFCNEKLVVQVLR-IGVSIGAERPLHLADEVKKE 383 (439)
Q Consensus 313 ~ll~~~~~~~~I~H---gG~g-s~~eal~~GvP---~v~~P-~~~DQ~~na~rv~~~~G-~G~~~~~~~~~~~~~~~~~~ 383 (439)
+++..+++ +|.- -|+| +..|++++|+| ++++. +.+ .+ +.+| -|+.+++ .+.+
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G----~~----~~l~~~allVnP---------~D~~ 431 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG----AG----QSLGAGALLVNP---------WNIT 431 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC----ch----hhhcCCeEEECC---------CCHH
Confidence 46666777 7754 4877 66799999999 34443 322 22 2334 4677765 7799
Q ss_pred HHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 038151 384 AVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQ 436 (439)
Q Consensus 384 ~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~ 436 (439)
+++++|.++|+.++ ++-+++.+++.+... .-+...-.+.|++.+.+
T Consensus 432 ~lA~AI~~aL~m~~--~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 432 EVSSAIKEALNMSD--EERETRHRHNFQYVK-----THSAQKWADDFMSELND 477 (797)
T ss_pred HHHHHHHHHHhCCH--HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHHH
Confidence 99999999998321 123333333333333 22344555566665544
No 159
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=66.20 E-value=17 Score=29.43 Aligned_cols=44 Identities=18% Similarity=0.099 Sum_probs=37.5
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
||++.+.++..|..-..-++.-|+..|++|.+.....-.+.+..
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~ 44 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVE 44 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 68999999999999999999999999999999987644444433
No 160
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=65.84 E-value=4.2 Score=31.31 Aligned_cols=28 Identities=21% Similarity=0.266 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 25 MIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 25 ~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
++.+|+.|.+.||++ ++++.....+++.
T Consensus 2 ~~~~a~~l~~lG~~i--~AT~gTa~~L~~~ 29 (95)
T PF02142_consen 2 IVPLAKRLAELGFEI--YATEGTAKFLKEH 29 (95)
T ss_dssp HHHHHHHHHHTTSEE--EEEHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEE--EEChHHHHHHHHc
Confidence 578999999999654 6677666666655
No 161
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=65.04 E-value=15 Score=27.21 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=32.4
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIV 42 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~ 42 (439)
+.-++++..+...|..-+-.||+.|++.|+.|...
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~ 49 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAY 49 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 47899999999999999999999999999999866
No 162
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.87 E-value=30 Score=32.72 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=45.9
Q ss_pred eecchhhhhccCCcceeeecCChhhHH-HHHHcCCCEeccccccchhhh--HHHHHHHhceeEEecccCCCcccCCCCHH
Q 038151 307 GWAPQVVILSHPTVGGFLTHCGWNSVL-EAVSNGLPMVTWPFFADQFCN--EKLVVQVLRIGVSIGAERPLHLADEVKKE 383 (439)
Q Consensus 307 ~~~p~~~ll~~~~~~~~I~HgG~gs~~-eal~~GvP~v~~P~~~DQ~~n--a~rv~~~~G~G~~~~~~~~~~~~~~~~~~ 383 (439)
.|-...++|.++++ .+-- +||.. +++-.|+|+|.+|-.+-|+.- |.+=..-+|+.+.+-.. .+.
T Consensus 301 sqqsfadiLH~ada--algm--AGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~---------~aq 367 (412)
T COG4370 301 SQQSFADILHAADA--ALGM--AGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP---------EAQ 367 (412)
T ss_pred eHHHHHHHHHHHHH--HHHh--ccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC---------chh
Confidence 33334445554444 3322 34444 457789999999999999554 43332345666555332 222
Q ss_pred HHHHHHHHhhcCCCccHHHH
Q 038151 384 AVEKAVNMLMDEGGEGDERR 403 (439)
Q Consensus 384 ~l~~ai~~vl~~~~~~~~~r 403 (439)
.-..+.++++.|++....+|
T Consensus 368 ~a~~~~q~ll~dp~r~~air 387 (412)
T COG4370 368 AAAQAVQELLGDPQRLTAIR 387 (412)
T ss_pred hHHHHHHHHhcChHHHHHHH
Confidence 33334444899884333333
No 163
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=63.68 E-value=25 Score=31.57 Aligned_cols=50 Identities=16% Similarity=0.019 Sum_probs=42.1
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIE 56 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~ 56 (439)
.+.+|++.+.++..|-....-++-.|+.+|++|+++...--.+.+.+...
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~ 136 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAK 136 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHH
Confidence 46799999999999999999999999999999999987655555545433
No 164
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=62.72 E-value=1.2e+02 Score=29.02 Aligned_cols=96 Identities=19% Similarity=0.216 Sum_probs=59.1
Q ss_pred CCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCCCCCCCCcCcH
Q 038151 16 FLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCENWDMLPSITLV 95 (439)
Q Consensus 16 ~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 95 (439)
..-.-|+.=+-.|-++|.++||+|.+-+-+.. .+.+.++.. ++.+.++.- .+ ...+.
T Consensus 7 I~n~~hvhfFk~lI~elekkG~ev~iT~rd~~--~v~~LLd~y-----gf~~~~Igk--------~g--------~~tl~ 63 (346)
T COG1817 7 IGNPPHVHFFKNLIWELEKKGHEVLITCRDFG--VVTELLDLY-----GFPYKSIGK--------HG--------GVTLK 63 (346)
T ss_pred cCCcchhhHHHHHHHHHHhCCeEEEEEEeecC--cHHHHHHHh-----CCCeEeecc--------cC--------CccHH
Confidence 44456888889999999999999987764421 122222222 677777631 11 01111
Q ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC---------CCCcccEEEe
Q 038151 96 PKFFSAVEMLQLPLENLFREIQPKPSCLISDI---------KFNVPRIVFH 137 (439)
Q Consensus 96 ~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~---------~lgiP~v~~~ 137 (439)
..+.... .-...+.+++.+ .+||+.+.-. -+|+|++.+.
T Consensus 64 ~Kl~~~~-eR~~~L~ki~~~--~kpdv~i~~~s~~l~rvafgLg~psIi~~ 111 (346)
T COG1817 64 EKLLESA-ERVYKLSKIIAE--FKPDVAIGKHSPELPRVAFGLGIPSIIFV 111 (346)
T ss_pred HHHHHHH-HHHHHHHHHHhh--cCCceEeecCCcchhhHHhhcCCceEEec
Confidence 1232222 223456777777 8999999933 8899999983
No 165
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=62.04 E-value=13 Score=32.85 Aligned_cols=43 Identities=12% Similarity=-0.090 Sum_probs=33.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCch
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAA 49 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~ 49 (439)
+.+||++.-.|+.|=+.-.+.|+++|.++||+|+++.++...+
T Consensus 4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA~~ 46 (196)
T PRK08305 4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQT 46 (196)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhHHH
Confidence 3568887777765544447999999999999999999885543
No 166
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=61.62 E-value=37 Score=32.17 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=35.0
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKN 47 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~ 47 (439)
+..+|-+.-.|+.|-=.=.=+|.++|.++||+|-+++-.+.
T Consensus 50 ~a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPS 90 (323)
T COG1703 50 NAHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPS 90 (323)
T ss_pred CCcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCC
Confidence 45677888889999999999999999999999999975433
No 167
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=59.26 E-value=7.5 Score=34.12 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=25.1
Q ss_pred CcEEEEecCCCccCHHH------------HHHHHHHHHhCCCeEEEEeCC
Q 038151 8 QLHFVLFPFLIQGHIIP------------MIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P------------~l~La~~L~~~Gh~V~~~~~~ 45 (439)
..|||+..-|++=.+.| -.+||+++..+|++|+++..+
T Consensus 3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence 34566555555444444 368999999999999999888
No 168
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=57.40 E-value=1.1e+02 Score=25.18 Aligned_cols=41 Identities=17% Similarity=0.026 Sum_probs=36.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKN 47 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~ 47 (439)
.++||++.+.+..+|-.--=-++..|+..|++|.-......
T Consensus 1 ~~~~v~~a~~g~D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s 41 (132)
T TIGR00640 1 RRPRILVAKMGQDGHDRGAKVIATAYADLGFDVDVGPLFQT 41 (132)
T ss_pred CCCEEEEEeeCCCccHHHHHHHHHHHHhCCcEEEECCCCCC
Confidence 36899999999999999999999999999999999876533
No 169
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=56.46 E-value=38 Score=35.33 Aligned_cols=80 Identities=11% Similarity=0.060 Sum_probs=45.0
Q ss_pred hhhhhccCCcceeee---cCChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHh-ceeEEecccCCCcccCCCCHHHH
Q 038151 311 QVVILSHPTVGGFLT---HCGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVL-RIGVSIGAERPLHLADEVKKEAV 385 (439)
Q Consensus 311 ~~~ll~~~~~~~~I~---HgG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~-G~G~~~~~~~~~~~~~~~~~~~l 385 (439)
..+++..+++ +|. +=|+| +.+||+++|+|+|+-...+=- .+..-+...- ..|+.+....... -.-+.++|
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~-~~v~E~v~~~~~~gi~V~~r~~~~--~~e~v~~L 542 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFG-CFMEEHIEDPESYGIYIVDRRFKS--PDESVQQL 542 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchh-hhhHHHhccCCCceEEEecCCccc--hHHHHHHH
Confidence 3445555666 665 45655 889999999999998653210 1111121111 2577775321000 01346778
Q ss_pred HHHHHHhhcC
Q 038151 386 EKAVNMLMDE 395 (439)
Q Consensus 386 ~~ai~~vl~~ 395 (439)
++++.++++.
T Consensus 543 a~~m~~~~~~ 552 (590)
T cd03793 543 TQYMYEFCQL 552 (590)
T ss_pred HHHHHHHhCC
Confidence 8888888853
No 170
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=54.31 E-value=52 Score=27.16 Aligned_cols=47 Identities=13% Similarity=0.027 Sum_probs=39.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+.+|++-+....+|-.=---++..|.++|++|.........+.+-+.
T Consensus 1 ~~~vvigtv~~D~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~a 47 (134)
T TIGR01501 1 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKA 47 (134)
T ss_pred CCeEEEEEecCChhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 35899999999999999999999999999999999876554444444
No 171
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=54.12 E-value=18 Score=35.25 Aligned_cols=47 Identities=9% Similarity=0.175 Sum_probs=41.6
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~ 53 (439)
.++|||++-....|++.=...+.+.|+++ +.+|++++.+.+.+.++.
T Consensus 4 ~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 52 (352)
T PRK10422 4 PFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSE 52 (352)
T ss_pred CCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhcc
Confidence 46799999999999999999999999998 899999999977766644
No 172
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=53.03 E-value=27 Score=35.29 Aligned_cols=80 Identities=9% Similarity=0.059 Sum_probs=56.1
Q ss_pred CCeEE-Eeecc-h-hhhhccCCcceeeecCC--hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCc
Q 038151 301 RGLLI-RGWAP-Q-VVILSHPTVGGFLTHCG--WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLH 375 (439)
Q Consensus 301 ~~~~v-~~~~p-~-~~ll~~~~~~~~I~HgG--~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~ 375 (439)
+|++. .++.+ . .+++..+++-+-++||. ..++.||+.+|+|++..=...... ..+ .. |-....
T Consensus 328 ~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~---~~i-~~---g~l~~~----- 395 (438)
T TIGR02919 328 DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNR---DFI-AS---ENIFEH----- 395 (438)
T ss_pred CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCc---ccc-cC---CceecC-----
Confidence 55554 44555 2 46899999988899977 679999999999999875432211 222 12 434433
Q ss_pred ccCCCCHHHHHHHHHHhhcCC
Q 038151 376 LADEVKKEAVEKAVNMLMDEG 396 (439)
Q Consensus 376 ~~~~~~~~~l~~ai~~vl~~~ 396 (439)
-+.+++.++|.++|.++
T Consensus 396 ----~~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 396 ----NEVDQLISKLKDLLNDP 412 (438)
T ss_pred ----CCHHHHHHHHHHHhcCH
Confidence 45899999999999876
No 173
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=51.91 E-value=18 Score=31.62 Aligned_cols=44 Identities=18% Similarity=0.095 Sum_probs=35.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
+||++.-.|+.|=+. ...|.+.|+++|++|.++.++.....+..
T Consensus 2 k~Ill~vtGsiaa~~-~~~li~~L~~~g~~V~vv~T~~A~~fi~~ 45 (182)
T PRK07313 2 KNILLAVSGSIAAYK-AADLTSQLTKRGYQVTVLMTKAATKFITP 45 (182)
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHHCCCEEEEEEChhHHHHcCH
Confidence 478888777776665 89999999999999999998866665543
No 174
>PRK05920 aromatic acid decarboxylase; Validated
Probab=51.23 E-value=23 Score=31.56 Aligned_cols=45 Identities=16% Similarity=0.040 Sum_probs=35.5
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
.+||++.-.|+.+= .=.+.|.++|.+.||+|+++.++.....+..
T Consensus 3 ~krIllgITGsiaa-~ka~~lvr~L~~~g~~V~vi~T~~A~~fv~~ 47 (204)
T PRK05920 3 MKRIVLAITGASGA-IYGVRLLECLLAADYEVHLVISKAAQKVLAT 47 (204)
T ss_pred CCEEEEEEeCHHHH-HHHHHHHHHHHHCCCEEEEEEChhHHHHHHH
Confidence 56887776665554 6899999999999999999999866555543
No 175
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=50.39 E-value=82 Score=29.32 Aligned_cols=30 Identities=7% Similarity=0.019 Sum_probs=21.1
Q ss_pred HHHHHHHHHhC---CCeEEEEeCCCCchhhhhh
Q 038151 25 MIDIARLLAKQ---GAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 25 ~l~La~~L~~~---Gh~V~~~~~~~~~~~~~~~ 54 (439)
+.+|++.|++. |++|+++++...+.-....
T Consensus 16 l~aL~~~l~~~~~~~~~V~VVAP~~eqSg~gha 48 (261)
T PRK13931 16 LEVLEQIATELAGPDGEVWTVAPAFEQSGVGHC 48 (261)
T ss_pred HHHHHHHHHHhccCCCeEEEEeCCCCCCCCccc
Confidence 55677777763 4799999998766654444
No 176
>PRK14099 glycogen synthase; Provisional
Probab=49.85 E-value=55 Score=33.57 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=29.9
Q ss_pred CCcEEEEecC---C---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 7 SQLHFVLFPF---L---IQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 7 ~~~~il~~~~---p---~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
++||||+++. | +-|=..=+-+|.++|+++||+|.++.+.
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~ 46 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPG 46 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4789999875 2 2244445678899999999999999774
No 177
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=49.32 E-value=23 Score=34.40 Aligned_cols=46 Identities=9% Similarity=0.156 Sum_probs=40.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~~ 54 (439)
||||++-..+.|++.=...+.+.|+++ +.+|+|++.+.+.+.++..
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRM 48 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcC
Confidence 589999999999999999999999997 8999999988666666543
No 178
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=46.62 E-value=29 Score=32.15 Aligned_cols=47 Identities=23% Similarity=0.224 Sum_probs=40.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
..-++++-.|+.|=..=+.+||.+|.++|+.|+|++.++....++..
T Consensus 105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~ 151 (254)
T COG1484 105 GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAA 151 (254)
T ss_pred CCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHH
Confidence 45788999999999999999999999889999999999776666555
No 179
>PRK14099 glycogen synthase; Provisional
Probab=46.11 E-value=32 Score=35.30 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=39.0
Q ss_pred cceeee---cCChh-hHHHHHHcCCCEecccccc--chhhhHHHHHHH--hceeEEecccCCCcccCCCCHHHHHHHHHH
Q 038151 320 VGGFLT---HCGWN-SVLEAVSNGLPMVTWPFFA--DQFCNEKLVVQV--LRIGVSIGAERPLHLADEVKKEAVEKAVNM 391 (439)
Q Consensus 320 ~~~~I~---HgG~g-s~~eal~~GvP~v~~P~~~--DQ~~na~rv~~~--~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~ 391 (439)
++.|+. +=|.| +.+||+++|+|.|+.-..+ |--....-..+. .+.|..++. .+++++.++|.+
T Consensus 370 aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~---------~d~~~La~ai~~ 440 (485)
T PRK14099 370 ADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP---------VTADALAAALRK 440 (485)
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC---------CCHHHHHHHHHH
Confidence 333775 34444 6789999998766654322 211111000001 146777755 568999999987
Q ss_pred ---hhcCC
Q 038151 392 ---LMDEG 396 (439)
Q Consensus 392 ---vl~~~ 396 (439)
+++|+
T Consensus 441 a~~l~~d~ 448 (485)
T PRK14099 441 TAALFADP 448 (485)
T ss_pred HHHHhcCH
Confidence 55655
No 180
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=45.49 E-value=30 Score=30.40 Aligned_cols=45 Identities=9% Similarity=0.033 Sum_probs=36.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCCchhhhhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAK-QGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~-~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+||++.-.|+.| .+=...|.++|.+ .||+|.++.++.....+...
T Consensus 2 k~IllgVTGsia-a~ka~~l~~~L~k~~g~~V~vv~T~~A~~fv~~~ 47 (185)
T PRK06029 2 KRLIVGISGASG-AIYGVRLLQVLRDVGEIETHLVISQAARQTLAHE 47 (185)
T ss_pred CEEEEEEECHHH-HHHHHHHHHHHHhhcCCeEEEEECHHHHHHHHHH
Confidence 478888888777 6669999999999 59999999999666655543
No 181
>TIGR03446 mycothiol_Mca mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme.
Probab=44.99 E-value=2e+02 Score=27.11 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=16.7
Q ss_pred HhhHHHHHHHHhcCCCCeEEEEeC
Q 038151 104 MLQLPLENLFREIQPKPSCLISDI 127 (439)
Q Consensus 104 ~~~~~l~~~~~~~~~~pd~vv~D~ 127 (439)
.....+.+++++ .+||+||+-.
T Consensus 108 ~~~~~L~~iIr~--~~PdvVvT~d 129 (283)
T TIGR03446 108 EAAEPLVRVIRE--FRPHVITTYD 129 (283)
T ss_pred HHHHHHHHHHHH--cCCEEEEecC
Confidence 355677778888 7999998853
No 182
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=44.95 E-value=60 Score=25.78 Aligned_cols=45 Identities=13% Similarity=-0.102 Sum_probs=36.4
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+++..+.++..|.....-++..|+++|++|.+.......+.+...
T Consensus 1 ~~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~~~~~~~~~~~~ 45 (125)
T cd02065 1 KVLGATVGGDVHDIGKNIVAIALRDNGFEVIDLGVDVPPEEIVEA 45 (125)
T ss_pred CEEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcCCCCCHHHHHHH
Confidence 367888899999999999999999999999999765444444443
No 183
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=44.94 E-value=29 Score=31.57 Aligned_cols=20 Identities=40% Similarity=0.305 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 038151 26 IDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 26 l~La~~L~~~Gh~V~~~~~~ 45 (439)
.+||++|.++||+|+++...
T Consensus 30 ~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 30 KIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred HHHHHHHHhCCCEEEEEECc
Confidence 57889999999999998644
No 184
>PRK10125 putative glycosyl transferase; Provisional
Probab=43.90 E-value=60 Score=32.36 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=43.9
Q ss_pred CeEEEeecc-h---hhhhccCCcceeeecC---C-hhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCC
Q 038151 302 GLLIRGWAP-Q---VVILSHPTVGGFLTHC---G-WNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERP 373 (439)
Q Consensus 302 ~~~v~~~~p-~---~~ll~~~~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~ 373 (439)
++...++.. + ..++..+++ ||.-. | -.+++||+++|+|+|+-...+ ....+ +. +-|..++.
T Consensus 287 ~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~--- 355 (405)
T PRK10125 287 NVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSE--- 355 (405)
T ss_pred ceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECC---
Confidence 455445542 2 234444666 77643 2 357899999999999997754 22234 33 46888865
Q ss_pred CcccCCCCHHHHHHHH
Q 038151 374 LHLADEVKKEAVEKAV 389 (439)
Q Consensus 374 ~~~~~~~~~~~l~~ai 389 (439)
-+.++|++++
T Consensus 356 ------~d~~~La~~~ 365 (405)
T PRK10125 356 ------EEVLQLAQLS 365 (405)
T ss_pred ------CCHHHHHhcc
Confidence 4577777643
No 185
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=43.85 E-value=63 Score=30.84 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=58.8
Q ss_pred CCeE-EEeecc---hhhhhccCCcceeeec--CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCC
Q 038151 301 RGLL-IRGWAP---QVVILSHPTVGGFLTH--CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPL 374 (439)
Q Consensus 301 ~~~~-v~~~~p---~~~ll~~~~~~~~I~H--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~ 374 (439)
+++. .++++| +.++|..++++.|+|+ =|.||+.-.+..|+|+++- .+-++|.... +.|+=+.-+.+
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~--e~gv~Vlf~~d--- 277 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT--EQGLPVLFTGD--- 277 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH--hCCCeEEecCC---
Confidence 5554 345554 6679999999888886 4899999999999999987 5556666644 66776655555
Q ss_pred cccCCCCHHHHHHHHHHh
Q 038151 375 HLADEVKKEAVEKAVNML 392 (439)
Q Consensus 375 ~~~~~~~~~~l~~ai~~v 392 (439)
.++...++++=+++
T Consensus 278 ----~L~~~~v~e~~rql 291 (322)
T PRK02797 278 ----DLDEDIVREAQRQL 291 (322)
T ss_pred ----cccHHHHHHHHHHH
Confidence 58888887775544
No 186
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=42.53 E-value=34 Score=32.68 Aligned_cols=35 Identities=14% Similarity=0.028 Sum_probs=29.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
.+|+|+++-.|+.| ..+|..|+++||+|++++...
T Consensus 4 ~~m~I~IiG~GaiG-----~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 4 ETPRIGIIGTGAIG-----GFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred cCcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 56899999888877 457888999999999998754
No 187
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=42.43 E-value=37 Score=32.45 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=34.5
Q ss_pred cEEEEecC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchh
Q 038151 9 LHFVLFPF-LIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAAR 50 (439)
Q Consensus 9 ~~il~~~~-p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~ 50 (439)
||++|+.- |+-|=..=..++|..++++|++|.++++......
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L 43 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSL 43 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHH
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccH
Confidence 56777776 8999999999999999999999999988866543
No 188
>PRK06849 hypothetical protein; Provisional
Probab=41.73 E-value=51 Score=32.60 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=28.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
.+++||++-. ...-.+.+++.|.++||+|+.+....
T Consensus 3 ~~~~VLI~G~----~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 3 TKKTVLITGA----RAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCCEEEEeCC----CcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4678888843 23368999999999999999997664
No 189
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=41.65 E-value=20 Score=30.35 Aligned_cols=32 Identities=25% Similarity=0.211 Sum_probs=26.2
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
||.++-.|..|+ +||..|+.+||+|++.+.+.
T Consensus 1 KI~ViGaG~~G~-----AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVIGAGNWGT-----ALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp EEEEESSSHHHH-----HHHHHHHHCTEEEEEETSCH
T ss_pred CEEEECcCHHHH-----HHHHHHHHcCCEEEEEeccH
Confidence 466666676665 79999999999999998874
No 190
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=41.02 E-value=36 Score=29.92 Aligned_cols=39 Identities=13% Similarity=-0.008 Sum_probs=32.1
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCc
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNA 48 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~ 48 (439)
||++.-.|+.|=+.-.+.+.++|.+.|++|+++.++...
T Consensus 2 ~I~lgITGs~~a~~a~~~ll~~L~~~g~~V~vI~S~~A~ 40 (187)
T TIGR02852 2 RIGFGLTGSHCTLEAVMPQLEKLVDEGAEVTPIVSETVQ 40 (187)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHHhCcCEEEEEEchhHH
Confidence 677777777777776679999999999999999888543
No 191
>PLN02939 transferase, transferring glycosyl groups
Probab=41.00 E-value=47 Score=36.83 Aligned_cols=41 Identities=29% Similarity=0.333 Sum_probs=30.8
Q ss_pred CCCcEEEEecC---C---CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 6 SSQLHFVLFPF---L---IQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 6 ~~~~~il~~~~---p---~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
.++|||+|++. | +-|=-.=.-+|.++|++.||+|.++++..
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y 525 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKY 525 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 36899999875 2 22333445689999999999999997754
No 192
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=40.99 E-value=34 Score=32.74 Aligned_cols=43 Identities=9% Similarity=0.030 Sum_probs=38.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhh
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARF 51 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~ 51 (439)
||||++-....|++-=...+.+.|++. +.+|+|++.+.+.+.+
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~ 45 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIP 45 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHH
Confidence 699999999999999999999999987 9999999988655544
No 193
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=40.30 E-value=74 Score=27.93 Aligned_cols=80 Identities=13% Similarity=0.032 Sum_probs=45.1
Q ss_pred ccccccchhhhHHHHHHHhceeEEecccCCCcc-----cCCCCHHHHH----HHHHHhhcCCCccHHHHHHHHHHHHHHH
Q 038151 344 TWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL-----ADEVKKEAVE----KAVNMLMDEGGEGDERRRRAKEYGEMAK 414 (439)
Q Consensus 344 ~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~-----~~~~~~~~l~----~ai~~vl~~~~~~~~~r~~a~~l~~~~~ 414 (439)
++|.+.||...-..+-|-..+|+.-..--+.+. =..++++.++ +-|+++|.|+ .+-+|-+++.+.+.
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~----~IIRnr~KI~Avi~ 97 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA----GIIRHRGKIQAIIG 97 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc----hhHHhHHHHHHHHH
Confidence 467789998888766678888877642111000 0136666665 6677788776 44444444433333
Q ss_pred HH------HHcCCchHHHH
Q 038151 415 RA------IEEGGSSSLNI 427 (439)
Q Consensus 415 ~~------~~~gG~~~~~~ 427 (439)
+| .+++||-...+
T Consensus 98 NA~~~l~i~~e~gSf~~yl 116 (187)
T PRK10353 98 NARAYLQMEQNGEPFADFV 116 (187)
T ss_pred HHHHHHHHHHhcCCHHHHH
Confidence 22 23366655555
No 194
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=39.25 E-value=21 Score=29.42 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 23 IPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 23 ~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
--.+=|+..|+++||+|++++++.....++-+
T Consensus 14 p~alYl~~~Lk~~G~~v~Va~npAA~kLl~va 45 (139)
T PF09001_consen 14 PSALYLSYKLKKKGFEVVVAGNPAALKLLEVA 45 (139)
T ss_dssp HHHHHHHHHHHCTTEEEEEEE-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEecCHHHHhHhhhc
Confidence 34577899999999999999999555444433
No 195
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=39.05 E-value=2.7e+02 Score=24.53 Aligned_cols=99 Identities=11% Similarity=0.022 Sum_probs=60.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC---C-CCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTT---P-KNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEG 82 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~---~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 82 (439)
.+-.|.+++..+.|=.+..+.+|.+.+.+|++|.++-- . ...+ . ..+.. .+++++.... ....
T Consensus 21 ~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQFlKg~~~~GE-~-~~l~~----l~~v~~~~~g-------~~~~ 87 (191)
T PRK05986 21 EKGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQFIKGAWSTGE-R-NLLEF----GGGVEFHVMG-------TGFT 87 (191)
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEEEecCCCccCH-H-HHHhc----CCCcEEEECC-------CCCc
Confidence 45689999999999999999999999999999998832 1 1111 1 11111 1257776643 1111
Q ss_pred CCCCCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC
Q 038151 83 CENWDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI 127 (439)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~ 127 (439)
+.. .. ...-............+.+.+ .+.|+||-|-
T Consensus 88 ~~~----~~---~~e~~~~~~~~~~~a~~~l~~--~~ydlvVLDE 123 (191)
T PRK05986 88 WET----QD---RERDIAAAREGWEEAKRMLAD--ESYDLVVLDE 123 (191)
T ss_pred ccC----CC---cHHHHHHHHHHHHHHHHHHhC--CCCCEEEEeh
Confidence 111 11 111223333445555666666 7999999994
No 196
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=38.87 E-value=34 Score=29.89 Aligned_cols=41 Identities=20% Similarity=0.174 Sum_probs=30.3
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhh
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQ 52 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~ 52 (439)
|++.-.|+.|-+. ...|.++|+++|++|.++.++.....+.
T Consensus 2 illgvtGsiaa~k-a~~lir~L~~~g~~V~vv~T~~A~~fv~ 42 (181)
T TIGR00421 2 IVVAMTGASGVIY-GIRLLEVLKEAGVEVHLVISDWAKETIK 42 (181)
T ss_pred EEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 4444455555444 4899999999999999999996666554
No 197
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=37.54 E-value=1.5e+02 Score=23.75 Aligned_cols=24 Identities=33% Similarity=0.397 Sum_probs=16.8
Q ss_pred HHHhhHHHHHHHHhcCCCCeEEEEeC
Q 038151 102 VEMLQLPLENLFREIQPKPSCLISDI 127 (439)
Q Consensus 102 ~~~~~~~l~~~~~~~~~~pd~vv~D~ 127 (439)
...+.+.+.+++++ .+||+|++-.
T Consensus 85 ~~~~~~~l~~~i~~--~~p~~V~t~~ 108 (128)
T PF02585_consen 85 WEELVRDLEDLIRE--FRPDVVFTPD 108 (128)
T ss_dssp HHHHHHHHHHHHHH--H-ESEEEEE-
T ss_pred HHHHHHHHHHHHHH--cCCCEEEECC
Confidence 34566778888888 6999988764
No 198
>PRK09620 hypothetical protein; Provisional
Probab=37.50 E-value=52 Score=29.98 Aligned_cols=38 Identities=16% Similarity=-0.089 Sum_probs=26.3
Q ss_pred CcEEEEecCCCccCHHH------------HHHHHHHHHhCCCeEEEEeCC
Q 038151 8 QLHFVLFPFLIQGHIIP------------MIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P------------~l~La~~L~~~Gh~V~~~~~~ 45 (439)
.++|++..-|++=.+.| -..||++|.++|++|+++...
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45666665554433333 267899999999999999654
No 199
>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA. The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases.
Probab=37.04 E-value=48 Score=28.76 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=30.8
Q ss_pred EEEecCCCccCHHH-HHHHHHHHHh-CCCeEEEEeCCCCchhhhh
Q 038151 11 FVLFPFLIQGHIIP-MIDIARLLAK-QGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 11 il~~~~p~~GHv~P-~l~La~~L~~-~Gh~V~~~~~~~~~~~~~~ 53 (439)
|+..-.++ ||.-. .+.+.+.|++ +||+|.++.++.....++.
T Consensus 2 i~~gitGs-g~~l~e~v~~l~~L~~~~g~eV~vv~S~~A~~vi~~ 45 (174)
T TIGR02699 2 IAWGITGS-GDKLPETYSIMKDVKNRYGDEIDVFLSKAGEQVVKW 45 (174)
T ss_pred EEEEEEcc-HHHHHHHHHHHHHHHHhcCCEEEEEECHhHHHHHHH
Confidence 44444444 78766 8899999984 5999999999877665543
No 200
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=36.80 E-value=65 Score=24.08 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=28.7
Q ss_pred CcEEEEecCCCc--cCHHHHHHHHHHHHhCCCeEEEEe
Q 038151 8 QLHFVLFPFLIQ--GHIIPMIDIARLLAKQGAFVTIVT 43 (439)
Q Consensus 8 ~~~il~~~~p~~--GHv~P~l~La~~L~~~Gh~V~~~~ 43 (439)
|.+|+++|.... .+..-...|+..|++.|..|.+-.
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~ 38 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDD 38 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 357888887753 567778999999999999998854
No 201
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=36.28 E-value=45 Score=33.11 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=37.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+.+||++.-.|+.|= .-.+.|.+.|.+.|++|.++.++.....+...
T Consensus 2 ~~k~IllgiTGSiaa-~~~~~ll~~L~~~g~~V~vv~T~~A~~fv~~~ 48 (390)
T TIGR00521 2 ENKKILLGVTGGIAA-YKTVELVRELVRQGAEVKVIMTEAAKKFITPL 48 (390)
T ss_pred CCCEEEEEEeCHHHH-HHHHHHHHHHHhCCCEEEEEECHhHHHHHHHH
Confidence 356888887776555 55999999999999999999999776666543
No 202
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=35.98 E-value=1.1e+02 Score=33.34 Aligned_cols=111 Identities=13% Similarity=0.072 Sum_probs=61.9
Q ss_pred EEEeecchhh---hhccCCcceeeec---CChh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcc
Q 038151 304 LIRGWAPQVV---ILSHPTVGGFLTH---CGWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHL 376 (439)
Q Consensus 304 ~v~~~~p~~~---ll~~~~~~~~I~H---gG~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~ 376 (439)
.+.+++++.+ ++..+++ ++.- -|+| ++.|++++|+|-..+|+..+----+. ++.-|+.+++
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~----~l~~~llv~P------ 412 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA----ELAEALLVNP------ 412 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH----HhCcCeEECC------
Confidence 3556677654 5555776 6654 3655 77899999776222222221111111 2233777755
Q ss_pred cCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 038151 377 ADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQ 436 (439)
Q Consensus 377 ~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~ 436 (439)
.+.++++++|.++|+.++ ++.+++.+++.+.+. .-+...-.+++++.+.+
T Consensus 413 ---~d~~~la~ai~~~l~~~~--~e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 413 ---NDIEGIAAAIKRALEMPE--EEQRERMQAMQERLR-----RYDVHKWASDFLDELRE 462 (726)
T ss_pred ---CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHHH
Confidence 679999999999997541 122333333333322 34556666677766654
No 203
>PRK12827 short chain dehydrogenase; Provisional
Probab=35.81 E-value=1.6e+02 Score=26.38 Aligned_cols=37 Identities=30% Similarity=0.196 Sum_probs=25.4
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVT 43 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~ 43 (439)
|...+ .++|+++ ++.|.+- ..||+.|+++||+|+.+.
T Consensus 1 ~~~~~--~~~ilIt--Gasg~iG--~~la~~l~~~g~~v~~~~ 37 (249)
T PRK12827 1 MASLD--SRRVLIT--GGSGGLG--RAIAVRLAADGADVIVLD 37 (249)
T ss_pred CCCcC--CCEEEEE--CCCChHH--HHHHHHHHHCCCeEEEEc
Confidence 44443 3455443 5666664 588999999999998864
No 204
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=35.51 E-value=52 Score=33.55 Aligned_cols=40 Identities=25% Similarity=0.257 Sum_probs=34.8
Q ss_pred CCCcEEEEecCCCccCHHHH------------HHHHHHHHhCCCeEEEEeCC
Q 038151 6 SSQLHFVLFPFLIQGHIIPM------------IDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 6 ~~~~~il~~~~p~~GHv~P~------------l~La~~L~~~Gh~V~~~~~~ 45 (439)
.+.+|||+..-|++=-+.|. .+||+++..+|++|++++.+
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp 305 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGP 305 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCC
Confidence 45689999988988888875 68999999999999999876
No 205
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=35.33 E-value=42 Score=32.80 Aligned_cols=116 Identities=10% Similarity=0.173 Sum_probs=63.5
Q ss_pred CCeEEE-eecchhhhhccCCcceeeecCChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCC
Q 038151 301 RGLLIR-GWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADE 379 (439)
Q Consensus 301 ~~~~v~-~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~ 379 (439)
.++... +..+-.++|..+++ +||--. ....|.+..++|++....-.|... +..|.-... .+..-+..-
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~------~~rg~~~~~--~~~~pg~~~ 320 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYE------KERGFYFDY--EEDLPGPIV 320 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTT------TTSSBSS-T--TTSSSS-EE
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHh------hccCCCCch--HhhCCCcee
Confidence 454442 33345678988888 999984 589999999999998765444331 222332222 111000012
Q ss_pred CCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 038151 380 VKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLI 431 (439)
Q Consensus 380 ~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~ 431 (439)
-+.++|.++|+.+++++ ..++++.++..+++-. ..+|.++++.++.++
T Consensus 321 ~~~~eL~~~i~~~~~~~---~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 321 YNFEELIEAIENIIENP---DEYKEKREKFRDKFFK-YNDGNSSERIVNYIF 368 (369)
T ss_dssp SSHHHHHHHHTTHHHHH---HHTHHHHHHHHHHHST-T--S-HHHHHHHHHH
T ss_pred CCHHHHHHHHHhhhhCC---HHHHHHHHHHHHHhCC-CCCchHHHHHHHHHh
Confidence 55789999999988754 2455566666666654 356777766665544
No 206
>PRK14098 glycogen synthase; Provisional
Probab=34.85 E-value=62 Score=33.22 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=29.8
Q ss_pred CCcEEEEecC---C---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 7 SQLHFVLFPF---L---IQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 7 ~~~~il~~~~---p---~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
+.||||+++. | +-|=-.=+-+|.++|+++||+|.++.+.
T Consensus 4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~ 48 (489)
T PRK14098 4 RNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPK 48 (489)
T ss_pred CCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCC
Confidence 5699999875 1 2344444678999999999999999764
No 207
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=34.69 E-value=46 Score=31.41 Aligned_cols=31 Identities=23% Similarity=0.191 Sum_probs=25.3
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTT 44 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~ 44 (439)
|||.++-.|..| ..+|..|++.||+|+++..
T Consensus 1 m~I~IiG~G~~G-----~~~a~~L~~~g~~V~~~~r 31 (304)
T PRK06522 1 MKIAILGAGAIG-----GLFGAALAQAGHDVTLVAR 31 (304)
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 577777776666 5688899999999999986
No 208
>PRK10490 sensor protein KdpD; Provisional
Probab=34.05 E-value=92 Score=34.76 Aligned_cols=41 Identities=20% Similarity=0.158 Sum_probs=36.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKN 47 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~ 47 (439)
-++||.+=-.|+-|-.+-||.-|++|+++|++|.+---+..
T Consensus 23 g~l~i~~g~~~gvgkt~~ml~~a~~~~~~g~dvv~g~~e~h 63 (895)
T PRK10490 23 GKLKIFFGACAGVGKTYAMLQEAQRLRAQGLDVLVGVVETH 63 (895)
T ss_pred CcEEEEeecCCCCCHHHHHHHHHHHHHhCCCcEEEEEeeCC
Confidence 46899999999999999999999999999999987755533
No 209
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=33.92 E-value=44 Score=31.60 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=26.1
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
|||+++-.|+.| ..+|..|++.||+|++++.+
T Consensus 1 mkI~IiG~G~iG-----~~~a~~L~~~g~~V~~~~r~ 32 (305)
T PRK12921 1 MRIAVVGAGAVG-----GTFGGRLLEAGRDVTFLVRP 32 (305)
T ss_pred CeEEEECCCHHH-----HHHHHHHHHCCCceEEEecH
Confidence 578888777776 46788999999999999763
No 210
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=33.16 E-value=1e+02 Score=26.36 Aligned_cols=24 Identities=25% Similarity=0.476 Sum_probs=20.2
Q ss_pred eeecCChh------hHHHHHHcCCCEeccc
Q 038151 323 FLTHCGWN------SVLEAVSNGLPMVTWP 346 (439)
Q Consensus 323 ~I~HgG~g------s~~eal~~GvP~v~~P 346 (439)
+++|+|-| .+.+|...++|+|++.
T Consensus 64 ~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 64 VVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred EEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 88888854 6679999999999995
No 211
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs. A related protein is found in archaea.
Probab=33.04 E-value=1.9e+02 Score=24.62 Aligned_cols=44 Identities=11% Similarity=-0.089 Sum_probs=36.6
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+++.-.|+.|=..=.+.++...++.|..|.|++.+...+.+.+.
T Consensus 2 ~li~G~~G~GKT~l~~~~~~~~~~~g~~v~~~s~e~~~~~~~~~ 45 (187)
T cd01124 2 TLLSGGPGTGKTTFALQFLYAGLARGEPGLYVTLEESPEELIEN 45 (187)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHCCCcEEEEECCCCHHHHHHH
Confidence 56677789999999999999999999999999988776655444
No 212
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=32.73 E-value=49 Score=30.73 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=32.2
Q ss_pred eEEEeecchhhhhccCCcceeeecCChhhHHHHHHcCCCEecccc
Q 038151 303 LLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPF 347 (439)
Q Consensus 303 ~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~ 347 (439)
+.+.+-++-..++.+++. |||-.+ .+-.||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 334445666788988887 887765 478999999999999853
No 213
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=32.61 E-value=69 Score=20.73 Aligned_cols=27 Identities=30% Similarity=0.501 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHhhcCCCccHHHHHHHHHHH
Q 038151 381 KKEAVEKAVNMLMDEGGEGDERRRRAKEYG 410 (439)
Q Consensus 381 ~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~ 410 (439)
|+++|.+||..+.+.. .++++.|+..+
T Consensus 1 tee~l~~Ai~~v~~g~---~S~r~AA~~yg 27 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK---MSIRKAAKKYG 27 (45)
T ss_dssp -HHHHHHHHHHHHTTS---S-HHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCC---CCHHHHHHHHC
Confidence 5789999999998641 46777777654
No 214
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.
Probab=32.52 E-value=61 Score=29.56 Aligned_cols=44 Identities=5% Similarity=-0.074 Sum_probs=31.7
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhhh
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~~ 54 (439)
|++.-.|+.+=+.=.+.|.+.|+++ |++|.++.++.....+...
T Consensus 2 i~~~itGs~~~~~~~~~l~~~L~~~~~g~~V~vv~T~~a~~~i~~~ 47 (234)
T TIGR02700 2 IGWGITGAGHLLVESFQVMKELKREIEELRVSTFVSRAGEEVVRMY 47 (234)
T ss_pred eEEEEeCccHhHHHHHHHHHHHHhhcCCCeEEEEEChhHHhHHhhh
Confidence 4444344444447899999999999 9999999988665555443
No 215
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=32.40 E-value=74 Score=27.92 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEee
Q 038151 26 IDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFR 71 (439)
Q Consensus 26 l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 71 (439)
=.|+..|+++||+|++.+.......-... -.+++...+|
T Consensus 24 e~L~~~l~~~g~~v~Vyc~~~~~~~~~~~-------y~gv~l~~i~ 62 (185)
T PF09314_consen 24 EELAPRLVSKGIDVTVYCRSDYYPYKEFE-------YNGVRLVYIP 62 (185)
T ss_pred HHHHHHHhcCCceEEEEEccCCCCCCCcc-------cCCeEEEEeC
Confidence 35788888889999999876544322221 1257777765
No 216
>PRK13604 luxD acyl transferase; Provisional
Probab=32.20 E-value=91 Score=29.79 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=31.1
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIV 42 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~ 42 (439)
.+...+++..+..++-.-+..+|+.|+++|+.|.-+
T Consensus 35 ~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrf 70 (307)
T PRK13604 35 KKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRY 70 (307)
T ss_pred CCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEe
Confidence 455788889999998777999999999999988776
No 217
>PRK06067 flagellar accessory protein FlaH; Validated
Probab=32.11 E-value=2.1e+02 Score=25.71 Aligned_cols=44 Identities=16% Similarity=0.083 Sum_probs=35.1
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
-+++.-.|+.|--.-...++....++|..|.|++.+...+.+.+
T Consensus 27 ~~~i~G~~GsGKt~l~~~~~~~~~~~g~~~~y~~~e~~~~~~~~ 70 (234)
T PRK06067 27 LILIEGDHGTGKSVLSQQFVYGALKQGKKVYVITTENTSKSYLK 70 (234)
T ss_pred EEEEECCCCCChHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHH
Confidence 45666778999999999998888788999999998765544433
No 218
>COG0678 AHP1 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=31.64 E-value=1.7e+02 Score=24.75 Aligned_cols=61 Identities=16% Similarity=0.188 Sum_probs=38.4
Q ss_pred CCcEEEEecCC-------CccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEE
Q 038151 7 SQLHFVLFPFL-------IQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVI 68 (439)
Q Consensus 7 ~~~~il~~~~p-------~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 68 (439)
+..+|++++.| +..|+--++.++.+++++|.+=.++.+-+..-...++.......+ +|.|+
T Consensus 36 ~gKkVvlf~lPGAFTPTCS~~hlPgY~~~~d~f~~kGVD~I~cVSVND~FVm~AWak~~g~~~-~I~fi 103 (165)
T COG0678 36 KGKKVVLFSLPGAFTPTCSSSHLPGYLELADEFKAKGVDEIYCVSVNDAFVMNAWAKSQGGEG-NIKFI 103 (165)
T ss_pred CCCEEEEEeCCCccCCCcccccCccHHHHHHHHHHcCCceEEEEEeCcHHHHHHHHHhcCCCc-cEEEe
Confidence 34688888776 347999999999999999987555544333333333433222122 57774
No 219
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=31.64 E-value=54 Score=28.54 Aligned_cols=42 Identities=19% Similarity=0.089 Sum_probs=31.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQ 52 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~ 52 (439)
||++.-.|+. .+.-...|.+.|+++|++|.++.++.....+.
T Consensus 2 ~I~lgvtGs~-~a~~~~~ll~~L~~~g~~V~vi~T~~A~~fi~ 43 (177)
T TIGR02113 2 KILLAVTGSI-AAYKAADLTSQLTKLGYDVTVLMTQAATQFIT 43 (177)
T ss_pred EEEEEEcCHH-HHHHHHHHHHHHHHCCCEEEEEEChHHHhhcc
Confidence 5666666654 45577899999999999999999886555444
No 220
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=31.54 E-value=38 Score=31.14 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=23.6
Q ss_pred EEEEecC---C---CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 10 HFVLFPF---L---IQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 10 ~il~~~~---p---~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
||+|+++ | +-|=-.=.-.|+++|+++||+|+++.+..
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccc
Confidence 4666654 2 22333445689999999999999997754
No 221
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=31.47 E-value=59 Score=30.28 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=39.1
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~~ 54 (439)
|||++-....|++.=+..+.+.|+++ +.+|++++.+.+.+.++..
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~ 47 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM 47 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC
Confidence 68999999999999999999999998 4899999999776666543
No 222
>PF13326 PSII_Pbs27: Photosystem II Pbs27; PDB: 2KND_A 2KMF_A 2Y6X_A.
Probab=31.45 E-value=2.2e+02 Score=23.91 Aligned_cols=55 Identities=16% Similarity=0.197 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHH-------cCC-chHHHHHHHHHHHHHh
Q 038151 383 EAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIE-------EGG-SSSLNIKLLIQDIMQR 437 (439)
Q Consensus 383 ~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~-------~gG-~~~~~~~~~~~~~~~~ 437 (439)
-.+.+.|+..++-+.+....++.+...++.+++.+. -.| .|+..+...++.|.+|
T Consensus 54 ~~vv~~lr~~l~l~~d~~~~~~~~~~ar~~in~~vs~YRr~~~v~g~~Sf~~m~tAln~Lagh 116 (145)
T PF13326_consen 54 RAVVKTLREALELDKDDPNRAEAAAEARELINDYVSRYRRGPSVSGLPSFTTMYTALNALAGH 116 (145)
T ss_dssp HHHHHHHHHHHCS-TT-TTHHHHHHHHHHHHHHHHCCCCCCHHCCTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhCCCCCcCCcchHHHHHHHHHHHHHH
Confidence 356666777665444444778888888888888763 234 8899999999988876
No 223
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=31.01 E-value=1.2e+02 Score=27.61 Aligned_cols=43 Identities=19% Similarity=0.152 Sum_probs=35.7
Q ss_pred EEEecC-CCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 11 FVLFPF-LIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 11 il~~~~-p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
|.|++. |+.|=..-.+.||-+|+++|-.|+++=..++.+.. ++
T Consensus 4 Itf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl~-~W 47 (231)
T PF07015_consen 4 ITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQPLA-KW 47 (231)
T ss_pred EEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcHH-HH
Confidence 455555 99999999999999999999999999777666654 55
No 224
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=30.57 E-value=59 Score=30.97 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=39.3
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~ 53 (439)
|||++-....|++.=+..+.+.|+++ +.+|+|++.+.+.+.++.
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~~ 46 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVRL 46 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhhc
Confidence 58999999999999999999999998 999999999877666654
No 225
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=30.36 E-value=3.4e+02 Score=23.08 Aligned_cols=96 Identities=13% Similarity=-0.012 Sum_probs=57.4
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE---eCC-CCchhhhhhhhhcccCCCCeEEEEeeCCCccCCCCCCCCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIV---TTP-KNAARFQNVIERGIQSGLPIQVIEFRFPCQEVGLPEGCEN 85 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~---~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~ 85 (439)
-|.+.+.++.|=.+-.+.+|-+.+.+|++|.|+ -.. ...+ . ...... +++.+.... ....+..
T Consensus 4 ~i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~vQFlKg~~~~gE-~-~~l~~l----~~v~~~~~g-------~~~~~~~ 70 (159)
T cd00561 4 LIQVYTGNGKGKTTAALGLALRALGHGYRVGVVQFLKGGWKYGE-L-KALERL----PNIEIHRMG-------RGFFWTT 70 (159)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEEeCCCCccCH-H-HHHHhC----CCcEEEECC-------CCCccCC
Confidence 467788899999999999999999999999994 332 1111 1 111111 367776542 1111111
Q ss_pred CCCCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC
Q 038151 86 WDMLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI 127 (439)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~ 127 (439)
. . ...-............+.+++ .+.|++|-|-
T Consensus 71 ----~--~-~~~~~~~a~~~~~~a~~~~~~--~~~dLlVLDE 103 (159)
T cd00561 71 ----E--N-DEEDIAAAAEGWAFAKEAIAS--GEYDLVILDE 103 (159)
T ss_pred ----C--C-hHHHHHHHHHHHHHHHHHHhc--CCCCEEEEec
Confidence 0 1 112223333445555666666 7999999995
No 226
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=30.27 E-value=2.8e+02 Score=27.92 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=21.5
Q ss_pred HHHHHHHhcCCCCeEEEEeC-------CCCcccEEE
Q 038151 108 PLENLFREIQPKPSCLISDI-------KFNVPRIVF 136 (439)
Q Consensus 108 ~l~~~~~~~~~~pd~vv~D~-------~lgiP~v~~ 136 (439)
++++.++. .+||++|... ++|||++..
T Consensus 368 e~~~~i~~--~~pDliiG~s~~~~~a~~~gip~v~~ 401 (435)
T cd01974 368 HLRSLLFT--EPVDLLIGNTYGKYIARDTDIPLVRF 401 (435)
T ss_pred HHHHHHhh--cCCCEEEECccHHHHHHHhCCCEEEe
Confidence 45555666 6899999997 899999876
No 227
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=29.90 E-value=1.2e+02 Score=25.79 Aligned_cols=25 Identities=16% Similarity=0.218 Sum_probs=20.8
Q ss_pred eeeecCChh------hHHHHHHcCCCEeccc
Q 038151 322 GFLTHCGWN------SVLEAVSNGLPMVTWP 346 (439)
Q Consensus 322 ~~I~HgG~g------s~~eal~~GvP~v~~P 346 (439)
.+++|+|-| .+.+|...++|+|++.
T Consensus 66 v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 66 VCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred EEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 388888844 7789999999999996
No 228
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=29.82 E-value=3.5e+02 Score=23.05 Aligned_cols=109 Identities=15% Similarity=0.064 Sum_probs=59.4
Q ss_pred EEecCCCccCHHHHH-HHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeCCCcc---CCCCCCCCCCC
Q 038151 12 VLFPFLIQGHIIPMI-DIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRFPCQE---VGLPEGCENWD 87 (439)
Q Consensus 12 l~~~~p~~GHv~P~l-~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~l~~~~~~~~ 87 (439)
..+.+...+.+..+| .+|.+|+.+|++|.=+........-. ....+....++..... ..+-++ ...+
T Consensus 2 aav~~~~~~~~d~lL~~~a~~L~~~G~rv~G~vQ~~~~~~~~--------~~~~m~l~dl~~G~~~~IsQ~LG~g-s~gC 72 (159)
T PF10649_consen 2 AAVVYDDGGDIDALLAAFAARLRARGVRVAGLVQRNTADGDG--------GRCDMDLRDLPSGRRIRISQDLGPG-SRGC 72 (159)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccCCCCC--------CccceEEEECCCCCEEEEeeccCCC-Cccc
Confidence 344555667777766 59999999999988776542111000 0112444433211000 001110 0111
Q ss_pred CCCCcCcHHHHHHHHHHhhHHHHHHHHhcCCCCeEEEEeC-------------------CCCcccEEEechh
Q 038151 88 MLPSITLVPKFFSAVEMLQLPLENLFREIQPKPSCLISDI-------------------KFNVPRIVFHGFS 140 (439)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pd~vv~D~-------------------~lgiP~v~~~~~~ 140 (439)
.+. ..........+++.+++ .+|++|..- ..|||+++..+..
T Consensus 73 rLD--------~~~La~A~~~l~~al~~---~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~~ 133 (159)
T PF10649_consen 73 RLD--------PGALAEASAALRRALAE---GADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPPR 133 (159)
T ss_pred ccC--------HHHHHHHHHHHHHHHhc---CCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECHH
Confidence 111 12334456677777776 899999887 8899999975444
No 229
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=29.76 E-value=35 Score=34.71 Aligned_cols=63 Identities=17% Similarity=0.095 Sum_probs=41.5
Q ss_pred hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccCCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHH
Q 038151 331 SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAERPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRR 405 (439)
Q Consensus 331 s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~ 405 (439)
++.||+++|+|+++.=. .--+..+ ...--|..+++. .-....++.++.+...|++.-.++.++
T Consensus 381 v~IEAMa~glPvvAt~~----GGP~EiV-~~~~tG~l~dp~-------~e~~~~~a~~~~kl~~~p~l~~~~~~~ 443 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNN----GGPAEIV-VHGVTGLLIDPG-------QEAVAELADALLKLRRDPELWARMGKN 443 (495)
T ss_pred eeHHHHhcCCCEEEecC----CCceEEE-EcCCcceeeCCc-------hHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 78999999999998733 2223334 354566677654 233447999999999998443333333
No 230
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=29.56 E-value=74 Score=31.70 Aligned_cols=47 Identities=21% Similarity=0.087 Sum_probs=37.8
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+++||++.-.|+. .+.=...|.+.|++.|++|.++.++.....+...
T Consensus 5 ~~k~IllgvTGsi-aa~k~~~lv~~L~~~g~~V~vv~T~~A~~fi~~~ 51 (399)
T PRK05579 5 AGKRIVLGVSGGI-AAYKALELVRRLRKAGADVRVVMTEAAKKFVTPL 51 (399)
T ss_pred CCCeEEEEEeCHH-HHHHHHHHHHHHHhCCCEEEEEECHhHHHHHhHH
Confidence 4678888877766 5668899999999999999999998766666543
No 231
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=29.31 E-value=68 Score=27.73 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=21.1
Q ss_pred ccCCcceeeecCChhhHHHHHHcCCCEeccccc
Q 038151 316 SHPTVGGFLTHCGWNSVLEAVSNGLPMVTWPFF 348 (439)
Q Consensus 316 ~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~ 348 (439)
.+..++.+|++||...+..... ++|+|-+|..
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s 62 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPIS 62 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCC
Confidence 3455555999999888888877 9999999974
No 232
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=29.15 E-value=1.4e+02 Score=28.99 Aligned_cols=84 Identities=18% Similarity=0.189 Sum_probs=62.6
Q ss_pred cCCCeE-EEeecc---hhhhhccCCcceeeec--CChhhHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecccC
Q 038151 299 EGRGLL-IRGWAP---QVVILSHPTVGGFLTH--CGWNSVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 299 ~~~~~~-v~~~~p---~~~ll~~~~~~~~I~H--gG~gs~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~~ 372 (439)
+..++. +++++| +.++|..++++.|.|. =|.|++.-.+..|+|+++- .+-+++-... +.|+=+.-..+
T Consensus 243 ~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~--~~~ipVlf~~d- 316 (360)
T PF07429_consen 243 GAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLK--EQGIPVLFYGD- 316 (360)
T ss_pred CccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHH--hCCCeEEeccc-
Confidence 345665 456776 5679999999777765 5899999999999999987 5556665544 55776655544
Q ss_pred CCcccCCCCHHHHHHHHHHhhc
Q 038151 373 PLHLADEVKKEAVEKAVNMLMD 394 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~ 394 (439)
.++...|+++=+.+.+
T Consensus 317 ------~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 317 ------ELDEALVREAQRQLAN 332 (360)
T ss_pred ------cCCHHHHHHHHHHHhh
Confidence 5999999999887764
No 233
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=29.02 E-value=77 Score=28.38 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=13.4
Q ss_pred HHHHHHhcCCCCeEEEEeC
Q 038151 109 LENLFREIQPKPSCLISDI 127 (439)
Q Consensus 109 l~~~~~~~~~~pd~vv~D~ 127 (439)
+.+.++.....||+|+.|+
T Consensus 83 l~~~~~~l~~~PDlilVDG 101 (208)
T cd06559 83 LLEALEKLKTKPDLLLVDG 101 (208)
T ss_pred HHHHHHhCCCCCCEEEEeC
Confidence 4444444345799999999
No 234
>PF03720 UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; InterPro: IPR014027 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the C-terminal substrate-binding domain of these enzymes. Structural studies indicate that this domain forms an incomplete dinucleotide binding fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3GG2_D 1DLI_A 1DLJ_A 2Y0E_D 2Y0D_B 2Y0C_D 1MV8_B 1MUU_A 1MFZ_C 3TDK_B ....
Probab=28.50 E-value=69 Score=25.00 Aligned_cols=27 Identities=22% Similarity=0.372 Sum_probs=18.8
Q ss_pred ccCH--HHHHHHHHHHHhCCCeEEEEeCC
Q 038151 19 QGHI--IPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 19 ~GHv--~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
..++ .|.+.|+++|.++|.+|.+.=+-
T Consensus 11 ~~D~R~Sp~~~l~~~L~~~g~~V~~~DP~ 39 (106)
T PF03720_consen 11 TDDIRESPALELIEELKERGAEVSVYDPY 39 (106)
T ss_dssp SS--TT-HHHHHHHHHHHTT-EEEEE-TT
T ss_pred CcccccCHHHHHHHHHHHCCCEEEEECCc
Confidence 3444 79999999999999998888443
No 235
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=28.50 E-value=2e+02 Score=28.81 Aligned_cols=43 Identities=19% Similarity=0.127 Sum_probs=35.4
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
||+---|+-|-=+=+|.++..|+++| .|.+++.++-.+.++-.
T Consensus 96 iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklR 138 (456)
T COG1066 96 ILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLR 138 (456)
T ss_pred EEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHH
Confidence 44555589999999999999999999 99999999776665444
No 236
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=28.18 E-value=59 Score=33.09 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=25.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
|||+++--|-.| |+=|.+|+++||+||++-..
T Consensus 1 ~rVai~GaG~Ag-----L~~a~~La~~g~~vt~~ea~ 32 (485)
T COG3349 1 MRVAIAGAGLAG-----LAAAYELADAGYDVTLYEAR 32 (485)
T ss_pred CeEEEEcccHHH-----HHHHHHHHhCCCceEEEecc
Confidence 577777666655 78899999999999999544
No 237
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=27.79 E-value=90 Score=29.67 Aligned_cols=36 Identities=25% Similarity=0.206 Sum_probs=24.9
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVT 43 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~ 43 (439)
|+++. +.++++ |+.|-+ -..|+++|.++||+|+.+.
T Consensus 1 ~~~~~----k~vlVt-G~~G~I--G~~l~~~L~~~G~~V~~~~ 36 (325)
T PLN02989 1 MADGG----KVVCVT-GASGYI--ASWIVKLLLFRGYTINATV 36 (325)
T ss_pred CCCCC----CEEEEE-CCchHH--HHHHHHHHHHCCCEEEEEE
Confidence 66653 344444 556655 4678999999999998765
No 238
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=27.37 E-value=76 Score=22.49 Aligned_cols=20 Identities=35% Similarity=0.353 Sum_probs=17.0
Q ss_pred HHHHHHHHhCCCeEEEEeCC
Q 038151 26 IDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 26 l~La~~L~~~Gh~V~~~~~~ 45 (439)
+..|..|+++|++|+++=..
T Consensus 9 l~aA~~L~~~g~~v~v~E~~ 28 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEKN 28 (68)
T ss_dssp HHHHHHHHHTTSEEEEEESS
T ss_pred HHHHHHHHHCCCcEEEEecC
Confidence 67899999999999999543
No 239
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=27.09 E-value=1.1e+02 Score=26.08 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=19.7
Q ss_pred eeeecCChh------hHHHHHHcCCCEeccc
Q 038151 322 GFLTHCGWN------SVLEAVSNGLPMVTWP 346 (439)
Q Consensus 322 ~~I~HgG~g------s~~eal~~GvP~v~~P 346 (439)
.+++|+|-| .+.+|...++|+|++.
T Consensus 62 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 62 ALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred EEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 377777744 6678899999999996
No 240
>KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]
Probab=26.83 E-value=3e+02 Score=22.71 Aligned_cols=54 Identities=17% Similarity=0.310 Sum_probs=38.9
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCCCchhhhhhhhhcccCCCCeEEEEeeC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAF--VTIVTTPKNAARFQNVIERGIQSGLPIQVIEFRF 72 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~--V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 72 (439)
+.||+|+.--|+-.-++-++ ++|.+.|.. |+++-+..+...++.. ||.+..+++
T Consensus 15 ~~MrFLIThnPtnaTln~fi---eELkKygvttvVRVCe~TYdt~~lek~---------GI~Vldw~f 70 (173)
T KOG2836|consen 15 KNMRFLITHNPTNATLNKFI---EELKKYGVTTVVRVCEPTYDTTPLEKE---------GITVLDWPF 70 (173)
T ss_pred cceEEEEecCCCchhHHHHH---HHHHhcCCeEEEEecccccCCchhhhc---------CceEeeccc
Confidence 35999999999998888765 699999986 4444444444445554 799987765
No 241
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=26.72 E-value=76 Score=26.26 Aligned_cols=21 Identities=33% Similarity=0.244 Sum_probs=18.3
Q ss_pred HHHHHHHHhCCCeEEEEeCCC
Q 038151 26 IDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 26 l~La~~L~~~Gh~V~~~~~~~ 46 (439)
.-+|..|+++||+|++++...
T Consensus 11 ~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 11 SLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp HHHHHHHHHTTCEEEEEESHH
T ss_pred HHHHHHHHHCCCceEEEEccc
Confidence 357899999999999999885
No 242
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=26.68 E-value=1.3e+02 Score=24.06 Aligned_cols=35 Identities=26% Similarity=0.202 Sum_probs=29.3
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
++++..|..|+-.-+..+++.|+++|+.|..+..+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 35 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYP 35 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCT
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 36677788888888999999999999999888544
No 243
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=26.67 E-value=1.1e+02 Score=27.19 Aligned_cols=40 Identities=25% Similarity=0.168 Sum_probs=31.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
-+++|.+=..|+-|-.+-||.=|++|+++|.+|.+..-+.
T Consensus 4 GrLkIflG~apGVGKTy~ML~ea~~l~~~G~DVViG~vet 43 (211)
T PF02702_consen 4 GRLKIFLGAAPGVGKTYAMLQEAHRLKEQGVDVVIGYVET 43 (211)
T ss_dssp --EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEE---
T ss_pred ccEEEEEecCCCCCHHHHHHHHHHHHHHCCCCEEEEEecC
Confidence 4689999999999999999999999999999999886553
No 244
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.53 E-value=91 Score=28.10 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=20.8
Q ss_pred CCcEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEE
Q 038151 7 SQLHFVLFPF--LIQGHIIPMIDIARLLAKQGAFVTIV 42 (439)
Q Consensus 7 ~~~~il~~~~--p~~GHv~P~l~La~~L~~~Gh~V~~~ 42 (439)
.+.+|++... ++.|| +||+++.+.|+.|.-.
T Consensus 6 ~~k~VlItgcs~GGIG~-----ala~ef~~~G~~V~At 38 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGY-----ALAKEFARNGYLVYAT 38 (289)
T ss_pred CCCeEEEeecCCcchhH-----HHHHHHHhCCeEEEEE
Confidence 4445555433 44454 6899999999998644
No 245
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=26.25 E-value=80 Score=28.65 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 21 HIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 21 Hv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
|..-|-..|.+|+++|++|+++...
T Consensus 47 ~~saMRhfa~~L~~~G~~V~Y~~~~ 71 (224)
T PF04244_consen 47 FFSAMRHFADELRAKGFRVHYIELD 71 (224)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE-TT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5678899999999999999999877
No 246
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=26.22 E-value=72 Score=30.61 Aligned_cols=44 Identities=14% Similarity=0.212 Sum_probs=38.4
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~ 53 (439)
|||++-..+-|++.=...+.+.|++. +.+|+|++.+.+.+.++.
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 46 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLER 46 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhc
Confidence 68999999999999999999999988 899999998866555544
No 247
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=26.17 E-value=1.3e+02 Score=23.82 Aligned_cols=40 Identities=18% Similarity=0.273 Sum_probs=31.4
Q ss_pred ecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 14 FPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 14 ~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
+.+...|+-..++.+.+.++++|..|..+|.....+..+.
T Consensus 58 i~is~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ 97 (131)
T PF01380_consen 58 IIISYSGETRELIELLRFAKERGAPVILITSNSESPLARL 97 (131)
T ss_dssp EEEESSSTTHHHHHHHHHHHHTTSEEEEEESSTTSHHHHH
T ss_pred EeeeccccchhhhhhhHHHHhcCCeEEEEeCCCCCchhhh
Confidence 3334788999999999999999999999987766554433
No 248
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=26.15 E-value=1.6e+02 Score=24.98 Aligned_cols=22 Identities=32% Similarity=0.433 Sum_probs=18.3
Q ss_pred HhhHHHHHHHHhcCCCCeEEEEeC
Q 038151 104 MLQLPLENLFREIQPKPSCLISDI 127 (439)
Q Consensus 104 ~~~~~l~~~~~~~~~~pd~vv~D~ 127 (439)
...+.+.+++++ .+||+||+..
T Consensus 76 ~~~~~l~~~l~~--~~PD~IIsTh 97 (169)
T PF06925_consen 76 LFARRLIRLLRE--FQPDLIISTH 97 (169)
T ss_pred HHHHHHHHHHhh--cCCCEEEECC
Confidence 455678888888 8999999985
No 249
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=25.34 E-value=1.5e+02 Score=29.28 Aligned_cols=71 Identities=27% Similarity=0.342 Sum_probs=45.6
Q ss_pred CcceeeecCChhhHHHHHHc------------C-----CCEeccccccchhhhHHHHHHHhceeEEe-cccCCCcccCCC
Q 038151 319 TVGGFLTHCGWNSVLEAVSN------------G-----LPMVTWPFFADQFCNEKLVVQVLRIGVSI-GAERPLHLADEV 380 (439)
Q Consensus 319 ~~~~~I~HgG~gs~~eal~~------------G-----vP~v~~P~~~DQ~~na~rv~~~~G~G~~~-~~~~~~~~~~~~ 380 (439)
..+++++.||..+.+.|+.+ | .|.+.++-.. +.-+.+-+ ..+|+|+.. +.++.+ .+
T Consensus 103 ~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa-~~lGlg~~~I~~~~~~----~m 176 (373)
T PF00282_consen 103 DAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAA-RILGLGVRKIPTDEDG----RM 176 (373)
T ss_dssp TSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHH-HHTTSEEEEE-BBTTS----SB
T ss_pred CCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhc-ceeeeEEEEecCCcch----hh
Confidence 36679999998888777533 2 4566665433 45555556 688999544 344333 48
Q ss_pred CHHHHHHHHHHhhcC
Q 038151 381 KKEAVEKAVNMLMDE 395 (439)
Q Consensus 381 ~~~~l~~ai~~vl~~ 395 (439)
+.++|+++|++...+
T Consensus 177 d~~~L~~~l~~~~~~ 191 (373)
T PF00282_consen 177 DIEALEKALEKDIAN 191 (373)
T ss_dssp -HHHHHHHHHHHHHT
T ss_pred hHHHhhhhhcccccc
Confidence 899999999886544
No 250
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=25.32 E-value=78 Score=30.54 Aligned_cols=45 Identities=11% Similarity=0.192 Sum_probs=39.5
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCchhhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~~~~~~~~ 54 (439)
|||++-....|++.=...+.+.|+++ +.+|++++.+.+.+.++..
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 47 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSEN 47 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcC
Confidence 68999999999999999999999997 8999999999776666543
No 251
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.66 E-value=67 Score=30.00 Aligned_cols=28 Identities=14% Similarity=0.072 Sum_probs=22.7
Q ss_pred cceeeecCChhhHHHHHH------cCCCEecccc
Q 038151 320 VGGFLTHCGWNSVLEAVS------NGLPMVTWPF 347 (439)
Q Consensus 320 ~~~~I~HgG~gs~~eal~------~GvP~v~~P~ 347 (439)
++++|+-||-||++.+++ .++|++.+-.
T Consensus 36 ~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~ 69 (265)
T PRK04885 36 PDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHT 69 (265)
T ss_pred CCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeC
Confidence 445999999999999987 4788887753
No 252
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=24.55 E-value=78 Score=30.14 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=28.7
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
.+|+|.++-.|..|. ++|+.|+++||+|++....
T Consensus 3 ~~m~I~iiG~G~~G~-----~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILGAGAWGS-----TLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCEEEEEeCC
Confidence 468999998887774 7899999999999988654
No 253
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=24.42 E-value=1.4e+02 Score=28.29 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=32.4
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTT 44 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~ 44 (439)
|+|+++-=|+-|=.+-.+.||..|+++|++|.++=.
T Consensus 1 m~ia~~gKGGVGKTTta~nLA~~La~~G~rVLlID~ 36 (290)
T CHL00072 1 MKLAVYGKGGIGKSTTSCNISIALARRGKKVLQIGC 36 (290)
T ss_pred CeEEEECCCCCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 578888889999999999999999999999998843
No 254
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.25 E-value=3.4e+02 Score=27.35 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=40.2
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhh
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~ 53 (439)
++--|+|+-.=+.|-.+-.-.||+.|+++|+.|.+++..-+++.+-.
T Consensus 99 ~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~~RpAA~e 145 (451)
T COG0541 99 PPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADTYRPAAIE 145 (451)
T ss_pred CCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEecccCChHHHH
Confidence 35668888888999999999999999999999999998887765433
No 255
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=24.04 E-value=4.6e+02 Score=26.94 Aligned_cols=109 Identities=12% Similarity=0.069 Sum_probs=66.7
Q ss_pred eEEEeecchhh---hhccCCcceeee---cCChhhH-HHHHHcCC----CEeccccccchhhhHHHHHHHhceeEEeccc
Q 038151 303 LLIRGWAPQVV---ILSHPTVGGFLT---HCGWNSV-LEAVSNGL----PMVTWPFFADQFCNEKLVVQVLRIGVSIGAE 371 (439)
Q Consensus 303 ~~v~~~~p~~~---ll~~~~~~~~I~---HgG~gs~-~eal~~Gv----P~v~~P~~~DQ~~na~rv~~~~G~G~~~~~~ 371 (439)
+.+.+.+++.+ ++..+++ ++. ..|+|.+ .|.++++. |+|+-=+.+ | . +.+.-++.+++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----a--a-~~l~~AllVNP- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----A--A-VELKGALLTNP- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----c--h-hhcCCCEEECC-
Confidence 45666777665 4555666 444 4588855 59999877 555543321 1 1 35556778866
Q ss_pred CCCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Q 038151 372 RPLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRAIEEGGSSSLNIKLLIQDIMQR 437 (439)
Q Consensus 372 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~~~~gG~~~~~~~~~~~~~~~~ 437 (439)
.+.++++++|.++|+.+ .++-++|.+++.+.+.+. .+..=.+.|++.+...
T Consensus 433 --------~d~~~~A~ai~~AL~m~--~~Er~~R~~~l~~~v~~~-----d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 433 --------YDPVRMDETIYVALAMP--KAEQQARMREMFDAVNYY-----DVQRWADEFLAAVSPQ 483 (487)
T ss_pred --------CCHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHhhC-----CHHHHHHHHHHHhhhc
Confidence 78999999999999865 123344555555544422 3334455777776653
No 256
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=24.01 E-value=3.1e+02 Score=26.75 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=63.4
Q ss_pred HHhcCCCeEEEeecchhh-hhccCCcceeeecC---Chh-hHHHHHHcCCCEeccccccchhhhHHHHHHHhceeEEecc
Q 038151 296 ERIEGRGLLIRGWAPQVV-ILSHPTVGGFLTHC---GWN-SVLEAVSNGLPMVTWPFFADQFCNEKLVVQVLRIGVSIGA 370 (439)
Q Consensus 296 ~~~~~~~~~v~~~~p~~~-ll~~~~~~~~I~Hg---G~g-s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~~~~ 370 (439)
+........+++..+--. +-.|.++ ||+|= |.| ...++|+.|-|+|- |+..+ .+ +|..-+.
T Consensus 248 dlvr~gkasfegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLVH---------NS~~l-~d--~GYYY~~ 313 (364)
T PF10933_consen 248 DLVRDGKASFEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLVH---------NSPLL-KD--VGYYYPD 313 (364)
T ss_pred HHhhcCeeEEeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCccc---------Ccchh-cc--cCcCCCC
Confidence 344566677777766543 4556766 99994 333 67899999999984 67777 34 6665543
Q ss_pred cCCCcccCCCCHHHHHHHHHHhhcC-CCccHHHHHHHHHHHHH
Q 038151 371 ERPLHLADEVKKEAVEKAVNMLMDE-GGEGDERRRRAKEYGEM 412 (439)
Q Consensus 371 ~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~r~~a~~l~~~ 412 (439)
++..+=++++.+++.+ +...++|+++|+++=..
T Consensus 314 ---------fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~ 347 (364)
T PF10933_consen 314 ---------FDAFEGARQLLRAIREHDADLDAYRARARRLLDR 347 (364)
T ss_pred ---------ccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 6676666777666642 34466899999886554
No 257
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=23.89 E-value=2.9e+02 Score=24.47 Aligned_cols=102 Identities=7% Similarity=-0.020 Sum_probs=51.8
Q ss_pred CeEEEeecchhhhhccCCcceeeecCChhhHHHHHH----cCCCEeccccccch-----hhhHHHHHHHhceeEEecccC
Q 038151 302 GLLIRGWAPQVVILSHPTVGGFLTHCGWNSVLEAVS----NGLPMVTWPFFADQ-----FCNEKLVVQVLRIGVSIGAER 372 (439)
Q Consensus 302 ~~~v~~~~p~~~ll~~~~~~~~I~HgG~gs~~eal~----~GvP~v~~P~~~DQ-----~~na~rv~~~~G~G~~~~~~~ 372 (439)
.+.......+..-+..+++ +|.--+...+++.++ .++++-+ .|. +..-..+ ++-++-+.+..+-
T Consensus 55 ~i~~~~~~~~~~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G 127 (202)
T PRK06718 55 KIRWKQKEFEPSDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDG 127 (202)
T ss_pred CEEEEecCCChhhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCC
Confidence 4444333333344555565 888777666666554 4444433 333 2333334 3444555554431
Q ss_pred CCcccCCCCHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHH
Q 038151 373 PLHLADEVKKEAVEKAVNMLMDEGGEGDERRRRAKEYGEMAKRA 416 (439)
Q Consensus 373 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~r~~a~~l~~~~~~~ 416 (439)
.. -.-...|++.|+.++ +++...+-+...++++.+++.
T Consensus 128 ~s----P~la~~lr~~ie~~~--~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 128 AS----PKLAKKIRDELEALY--DESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred CC----hHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHh
Confidence 00 011345777777766 344556666666666666553
No 258
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=23.85 E-value=1.1e+02 Score=28.33 Aligned_cols=43 Identities=23% Similarity=0.209 Sum_probs=33.6
Q ss_pred EEEec-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 11 FVLFP-FLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 11 il~~~-~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
|++++ -|+.|-..-..+||..+++.|++|.++..... ..+...
T Consensus 2 ~~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~~-~sl~~~ 45 (254)
T cd00550 2 YIFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDPA-HSLSDS 45 (254)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCCc-ccHHHH
Confidence 44444 58999999999999999999999999977654 344443
No 259
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain is found in methionyl and leucyl tRNA synthetases. ; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 2D5B_A 1A8H_A 1WOY_A 2D54_A 4DLP_A 2CT8_B 2CSX_A 1MED_A 1PFU_A 1PFW_A ....
Probab=23.80 E-value=69 Score=31.81 Aligned_cols=35 Identities=29% Similarity=0.499 Sum_probs=24.6
Q ss_pred ccCHHHHH---HHHHHHHhCCCeEEEEeCC-CCchhhhh
Q 038151 19 QGHIIPMI---DIARLLAKQGAFVTIVTTP-KNAARFQN 53 (439)
Q Consensus 19 ~GHv~P~l---~La~~L~~~Gh~V~~~~~~-~~~~~~~~ 53 (439)
-||+.|++ .+|+-++.+||+|.|++.. .....++.
T Consensus 16 lGH~~~~l~ADv~aR~~r~~G~~v~~~tGtDehG~~i~~ 54 (391)
T PF09334_consen 16 LGHLYPYLAADVLARYLRLRGHDVLFVTGTDEHGSKIET 54 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-EEEEEEEEE-SSHHHHH
T ss_pred CChhHHHHHHHHHHHHHhhcccceeeEEecchhhHHHHH
Confidence 39999887 5888899999999999753 44444433
No 260
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=23.74 E-value=3e+02 Score=23.97 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=25.8
Q ss_pred EEEecCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCC
Q 038151 11 FVLFPFLIQGHIIPMIDIARLLAKQ--GAFVTIVTTPKN 47 (439)
Q Consensus 11 il~~~~p~~GHv~P~l~La~~L~~~--Gh~V~~~~~~~~ 47 (439)
++-+=..+-|-++-+..|+++|.++ |+.|.+-++...
T Consensus 23 ~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~t 61 (186)
T PF04413_consen 23 LIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPT 61 (186)
T ss_dssp -EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CC
T ss_pred cEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 3444456789999999999999988 898888876433
No 261
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=23.71 E-value=76 Score=27.90 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=24.2
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
|||.++ ++.|++-- .|.++..+|||+||-++-.
T Consensus 1 mKIaiI--gAsG~~Gs--~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 1 MKIAII--GASGKAGS--RILKEALKRGHEVTAIVRN 33 (211)
T ss_pred CeEEEE--ecCchhHH--HHHHHHHhCCCeeEEEEeC
Confidence 455554 55666653 5789999999999998755
No 262
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=23.64 E-value=1.3e+02 Score=27.75 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=31.0
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIV 42 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~ 42 (439)
|.|+++.=|+-|-.+=.+.||..|+++|++|.++
T Consensus 1 ~~i~v~gKGGvGKTT~a~nLA~~la~~G~rvlli 34 (267)
T cd02032 1 MVLAVYGKGGIGKSTTSSNLSVALAKRGKKVLQI 34 (267)
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 5788887789999999999999999999999988
No 263
>PRK05595 replicative DNA helicase; Provisional
Probab=23.35 E-value=6.2e+02 Score=25.52 Aligned_cols=44 Identities=16% Similarity=0.192 Sum_probs=35.0
Q ss_pred EEEEecCCCccCHHHHHHHHHHHH-hCCCeEEEEeCCCCchhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLA-KQGAFVTIVTTPKNAARFQN 53 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~-~~Gh~V~~~~~~~~~~~~~~ 53 (439)
=+++...|+.|=..=++.+|..++ +.|+.|.|++.+...+.+..
T Consensus 203 liviaarpg~GKT~~al~ia~~~a~~~g~~vl~fSlEms~~~l~~ 247 (444)
T PRK05595 203 MILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEMSKEQLAY 247 (444)
T ss_pred EEEEEecCCCChHHHHHHHHHHHHHHcCCcEEEEecCCCHHHHHH
Confidence 356677799999999999999876 56999999988866555444
No 264
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=23.30 E-value=2.7e+02 Score=22.76 Aligned_cols=45 Identities=13% Similarity=0.046 Sum_probs=36.2
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
+|++-+..+.+|-.=---++..|...|++|.........+.+-+.
T Consensus 1 ~vvigtv~gD~HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~a 45 (128)
T cd02072 1 TIVLGVIGSDCHAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDA 45 (128)
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 478889999999998888999999999999999776554444343
No 265
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=23.21 E-value=98 Score=27.71 Aligned_cols=29 Identities=31% Similarity=0.222 Sum_probs=21.6
Q ss_pred CCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 038151 17 LIQGHIIPMIDIARLLAKQGAFVTIVTTPKN 47 (439)
Q Consensus 17 p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~ 47 (439)
.+.|++- -+||++|++.||+|++.+....
T Consensus 7 ~GtGniG--~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 7 IGTGNIG--SALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred eccChHH--HHHHHHHHhCCCeEEEecCCCh
Confidence 4455554 5788999999999999966533
No 266
>PF05762 VWA_CoxE: VWA domain containing CoxE-like protein; InterPro: IPR008912 This group of proteins contains a VWA type domain and the function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon in several bacteria [].
Probab=23.11 E-value=1.5e+02 Score=26.77 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=32.2
Q ss_pred CcEEEEecCC-CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 8 QLHFVLFPFL-IQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 8 ~~~il~~~~p-~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
+--|++++=+ ..+...+.....++|+++|++|.|+++.
T Consensus 150 ~t~vvIiSDg~~~~~~~~~~~~l~~l~~r~~rviwLnP~ 188 (222)
T PF05762_consen 150 RTTVVIISDGWDTNDPEPLAEELRRLRRRGRRVIWLNPL 188 (222)
T ss_pred CcEEEEEecccccCChHHHHHHHHHHHHhCCEEEEECCc
Confidence 3457777777 7899999999999999999999999876
No 267
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=22.98 E-value=1.1e+02 Score=31.14 Aligned_cols=46 Identities=20% Similarity=0.096 Sum_probs=36.8
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
..||++...++.+ .+=...|.++|+++|++|.++.++.....+...
T Consensus 70 ~k~IllgVtGsIA-ayka~~lvr~L~k~G~~V~VvmT~sA~~fv~p~ 115 (475)
T PRK13982 70 SKRVTLIIGGGIA-AYKALDLIRRLKERGAHVRCVLTKAAQQFVTPL 115 (475)
T ss_pred CCEEEEEEccHHH-HHHHHHHHHHHHhCcCEEEEEECcCHHHHhhHH
Confidence 4678887777555 458899999999999999999999776666553
No 268
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=22.86 E-value=1.6e+02 Score=23.97 Aligned_cols=26 Identities=15% Similarity=0.167 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCch
Q 038151 24 PMIDIARLLAKQGAFVTIVTTPKNAA 49 (439)
Q Consensus 24 P~l~La~~L~~~Gh~V~~~~~~~~~~ 49 (439)
..+...++|.+.||+|+++|......
T Consensus 28 ~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 28 AVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCchh
Confidence 56777777889999999998775543
No 269
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=22.84 E-value=1.4e+02 Score=29.14 Aligned_cols=35 Identities=26% Similarity=0.326 Sum_probs=27.4
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 038151 6 SSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTT 44 (439)
Q Consensus 6 ~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~ 44 (439)
+.+|+|+++ |+.|.+- -.|++.|.++||+|+.+.-
T Consensus 19 ~~~~~IlVt--GgtGfIG--~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 19 SEKLRICIT--GAGGFIA--SHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCCEEEEE--CCccHHH--HHHHHHHHhCCCEEEEEEe
Confidence 357888876 6777764 5789999999999998863
No 270
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=22.79 E-value=1.6e+02 Score=25.85 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=29.3
Q ss_pred cEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 9 LHFVLFPF--LIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 9 ~~il~~~~--p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
+|+++++. +..|=..=...||..|+++|++|.++=..
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 56555554 67778888999999999999999988443
No 271
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=22.45 E-value=1.3e+02 Score=21.73 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 038151 24 PMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 24 P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
-.+.+|..|++.|.+|+++...+
T Consensus 10 ig~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 10 IGIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHHHhCcEEEEEeccc
Confidence 45889999999999999997653
No 272
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.18 E-value=6.6e+02 Score=23.59 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=27.7
Q ss_pred eecchhhhhccCCcceeee-cCChhhHHHHHHcCCCEecc
Q 038151 307 GWAPQVVILSHPTVGGFLT-HCGWNSVLEAVSNGLPMVTW 345 (439)
Q Consensus 307 ~~~p~~~ll~~~~~~~~I~-HgG~gs~~eal~~GvP~v~~ 345 (439)
++=|+.++|..++. +|. --..+-..||++.|+|+.+.
T Consensus 234 g~NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 234 GYNPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCCchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 34477788877665 555 45577789999999999765
No 273
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=22.12 E-value=4.9e+02 Score=26.10 Aligned_cols=28 Identities=29% Similarity=0.445 Sum_probs=23.2
Q ss_pred HHHHHHHHhcCCCCeEEEEeC-------CCCcccEEE
Q 038151 107 LPLENLFREIQPKPSCLISDI-------KFNVPRIVF 136 (439)
Q Consensus 107 ~~l~~~~~~~~~~pd~vv~D~-------~lgiP~v~~ 136 (439)
.++++++++ .+||++|.+. ++|||++..
T Consensus 362 ~e~~~~l~~--~~~dliiG~s~~~~~a~~~~ip~~~~ 396 (429)
T cd03466 362 FDIESYAKE--LKIDVLIGNSYGRRIAEKLGIPLIRI 396 (429)
T ss_pred HHHHHHHHh--cCCCEEEECchhHHHHHHcCCCEEEe
Confidence 456677777 6999999998 799999876
No 274
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=22.07 E-value=95 Score=26.92 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=32.4
Q ss_pred CCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 7 SQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 7 ~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
++..++++-.++.|=..=..++|+++.++|+.|.|+..+.
T Consensus 46 ~~~~l~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~~~ 85 (178)
T PF01695_consen 46 NGENLILYGPPGTGKTHLAVAIANEAIRKGYSVLFITASD 85 (178)
T ss_dssp C--EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEHHH
T ss_pred cCeEEEEEhhHhHHHHHHHHHHHHHhccCCcceeEeecCc
Confidence 3457899999999999999999999999999999998663
No 275
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.03 E-value=1.8e+02 Score=21.33 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=26.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVT 43 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~ 43 (439)
.+|++++. ...+..-.+.++..|++.|.+|.+-.
T Consensus 2 ~~v~ii~~-~~~~~~~a~~~~~~Lr~~g~~v~~d~ 35 (91)
T cd00860 2 VQVVVIPV-TDEHLDYAKEVAKKLSDAGIRVEVDL 35 (91)
T ss_pred eEEEEEee-CchHHHHHHHHHHHHHHCCCEEEEEC
Confidence 35666665 46778889999999999999998853
No 276
>PRK07236 hypothetical protein; Provisional
Probab=21.88 E-value=1.1e+02 Score=30.19 Aligned_cols=37 Identities=22% Similarity=0.163 Sum_probs=29.6
Q ss_pred CCCCCCCCcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 038151 1 MASQASSQLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTT 44 (439)
Q Consensus 1 m~~~~~~~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~ 44 (439)
|-+++ +++|+++--+-.| +.+|..|+++|++|+++=.
T Consensus 1 ~~~~~--~~~ViIVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 37 (386)
T PRK07236 1 MTHMS--GPRAVVIGGSLGG-----LFAALLLRRAGWDVDVFER 37 (386)
T ss_pred CCCCC--CCeEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 44544 7899999877555 8899999999999999953
No 277
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=21.84 E-value=1.1e+02 Score=28.80 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=33.3
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhh
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNV 54 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~ 54 (439)
.++|+++-.|..|. .+|+.|+++||.|.++.-....+..+..
T Consensus 3 ~~~v~IvG~GliG~-----s~a~~l~~~g~~v~i~g~d~~~~~~~~a 44 (279)
T COG0287 3 SMKVGIVGLGLMGG-----SLARALKEAGLVVRIIGRDRSAATLKAA 44 (279)
T ss_pred CcEEEEECCchHHH-----HHHHHHHHcCCeEEEEeecCcHHHHHHH
Confidence 56888888877775 5899999999999999887666655554
No 278
>PRK13236 nitrogenase reductase; Reviewed
Probab=21.82 E-value=1.6e+02 Score=27.82 Aligned_cols=36 Identities=17% Similarity=0.090 Sum_probs=30.8
Q ss_pred CCcEEEEecC-CCccCHHHHHHHHHHHHhCCCeEEEE
Q 038151 7 SQLHFVLFPF-LIQGHIIPMIDIARLLAKQGAFVTIV 42 (439)
Q Consensus 7 ~~~~il~~~~-p~~GHv~P~l~La~~L~~~Gh~V~~~ 42 (439)
+.||++-+.- |+-|=.+-.+.||..|+++|++|.++
T Consensus 4 ~~~~~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLli 40 (296)
T PRK13236 4 ENIRQIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIV 40 (296)
T ss_pred cCceEEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 4567766633 78899999999999999999999999
No 279
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=21.65 E-value=2.1e+02 Score=22.70 Aligned_cols=37 Identities=19% Similarity=0.092 Sum_probs=32.7
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPK 46 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~ 46 (439)
||++..-++.|=..-...|++.|+++|.+|.++-...
T Consensus 1 ~i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D~ 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 4788888999999999999999999999999886654
No 280
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase. This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH
Probab=21.65 E-value=81 Score=29.46 Aligned_cols=19 Identities=26% Similarity=0.259 Sum_probs=16.8
Q ss_pred HHHHHHHhCCCeEEEEeCC
Q 038151 27 DIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 27 ~La~~L~~~Gh~V~~~~~~ 45 (439)
.+|..|++.||+|++++..
T Consensus 5 ~~a~~L~~~G~~V~l~~r~ 23 (293)
T TIGR00745 5 LYGAYLARAGHDVTLLARG 23 (293)
T ss_pred HHHHHHHhCCCcEEEEecH
Confidence 4788999999999999875
No 281
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=21.45 E-value=2.4e+02 Score=23.98 Aligned_cols=60 Identities=13% Similarity=0.107 Sum_probs=38.8
Q ss_pred cEEEEecCC-------CccCHHHHHHHHHHHHhCCCeEEEEeCCCCchhhhhhhhhcccCCCCeEEEE
Q 038151 9 LHFVLFPFL-------IQGHIIPMIDIARLLAKQGAFVTIVTTPKNAARFQNVIERGIQSGLPIQVIE 69 (439)
Q Consensus 9 ~~il~~~~p-------~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 69 (439)
.|++++-.| +..|+.=++.=|.+|+..|.+..++.+-+.-=..+.+.+.+... ..++|..
T Consensus 44 KKvIifGvPgAFtPtCs~~HvPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~-~~V~f~a 110 (171)
T KOG0541|consen 44 KKVILFGVPGAFTPTCSSSHVPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGAN-DHVKFVA 110 (171)
T ss_pred ceEEEEcCCCccCCccccccCchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCcc-ceEEEEe
Confidence 456555443 56899999999999999999877776544333333444333222 2577764
No 282
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=21.36 E-value=91 Score=30.04 Aligned_cols=32 Identities=22% Similarity=0.170 Sum_probs=26.7
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
|||.++-.|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~IiG~G~mG-----~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 3 ARICVLGAGSIG-----CYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred ceEEEECCCHHH-----HHHHHHHHhcCCcEEEEecH
Confidence 689999877777 45789999999999999764
No 283
>PF01372 Melittin: Melittin; InterPro: IPR002116 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an Arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Api m 3. Melittin is the principal protein component of the venom of the honeybee, Apis mellifera. It inhibits protein kinase C, Ca2+/calmodulin-dependent protein kinase II, myosin light chain kinase and Na+/K+-ATPase (synaptosomal membrane) and is a cell membrane lytic factor. Melittin is a small peptide with no disulphide bridge; the N-terminal part of the molecule is predominantly hydrophobic and the C-terminal part is hydrophilic and strongly basic. The molecular mechanisms underlying the various effects of melittin on membranes have not been completely defined and much of the evidence indicates that different molecular mechanisms may underlie different actions of the peptide []. Extensive work with melittin has shown that the venom has multiple effects, probably, as a result of its interaction with negatively changed phospholipids. It inhibits well known transport pumps such as the Na+-K+-ATPase and the H+-K+-ATPase. Melittin increases the permeability of cell membranes to ions, particularly Na+ and indirectly Ca2+, because of the Na+-Ca2+-exchange. This effect results in marked morphological and functional changes, particularly in excitable tissues such as cardiac myocytes. In some other tissues, e.g., cornea, not only Na+ but Cl- permeability is also increased by melittin. Similar effects to melittin on H+-K+-ATPase have been found with the synthetic amphipathic polypeptide Trp-3 []. The study of melittin in model membranes has been useful for the development of methodology for determination of membrane protein structures. A molecular dynamics simulation of melittin in a hydrated dipalmitoylphosphatidylcholine (DPPC) bilayer was carried out. The effect of melittin on the surrounding membrane was localised to its immediate vicinity, and its asymmetry with respect to the two layers may be a result of the fact that it is not fully transmembranal. Melittin's hydrophilic C terminus anchors it at the extracellular interface, leaving the N terminus "loose" in the lower layer of the membrane [].; GO: 0004860 protein kinase inhibitor activity, 0005576 extracellular region; PDB: 3QRX_B 2MLT_A 1BH1_A.
Probab=21.36 E-value=14 Score=20.37 Aligned_cols=17 Identities=29% Similarity=0.724 Sum_probs=13.2
Q ss_pred ChhhHHHHHHcCCCEec
Q 038151 328 GWNSVLEAVSNGLPMVT 344 (439)
Q Consensus 328 G~gs~~eal~~GvP~v~ 344 (439)
|.|+++..|+.|.|.++
T Consensus 1 gIGa~Lkvla~~LP~lI 17 (26)
T PF01372_consen 1 GIGAILKVLATGLPTLI 17 (26)
T ss_dssp -HHHHHHHHHTHHHHHH
T ss_pred ChhHHHHHHHhcChHHH
Confidence 67888888888888765
No 284
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=21.22 E-value=5.8e+02 Score=22.55 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=21.9
Q ss_pred cEEEEecCCCccCHHHHHHHHHHHHhCC--CeEEEEeCC
Q 038151 9 LHFVLFPFLIQGHIIPMIDIARLLAKQG--AFVTIVTTP 45 (439)
Q Consensus 9 ~~il~~~~p~~GHv~P~l~La~~L~~~G--h~V~~~~~~ 45 (439)
|||+++..+...-+. +|.+.+.+.+ ++|.++.+.
T Consensus 2 ~ki~vl~sg~gs~~~---~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 2 KRIVVLASGNGSNLQ---AIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred ceEEEEEcCCChhHH---HHHHHHHcCCCCcEEEEEEec
Confidence 588888887744444 5556676653 677776444
No 285
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=21.05 E-value=1.5e+02 Score=22.90 Aligned_cols=44 Identities=11% Similarity=0.049 Sum_probs=33.1
Q ss_pred CCcEEEEecCCCccC-------HHHHHHHHHHHHhCCCeEEEEeCCCCchhh
Q 038151 7 SQLHFVLFPFLIQGH-------IIPMIDIARLLAKQGAFVTIVTTPKNAARF 51 (439)
Q Consensus 7 ~~~~il~~~~p~~GH-------v~P~l~La~~L~~~Gh~V~~~~~~~~~~~~ 51 (439)
.+.| +++|+++..- ...+-.|.++|+.-+.||.+..++...+.+
T Consensus 39 ~RpR-VcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~l 89 (97)
T PF06722_consen 39 GRPR-VCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAEL 89 (97)
T ss_dssp SSEE-EEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGC
T ss_pred CCCE-EEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhh
Confidence 3455 6677775443 358889999999999999999988666554
No 286
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=21.03 E-value=4e+02 Score=20.68 Aligned_cols=49 Identities=12% Similarity=0.071 Sum_probs=33.1
Q ss_pred EEEecCCCccC-HHHHHHHHHHHHhCC-CeEEEEeCCCCchhhhhhhhhccc
Q 038151 11 FVLFPFLIQGH-IIPMIDIARLLAKQG-AFVTIVTTPKNAARFQNVIERGIQ 60 (439)
Q Consensus 11 il~~~~p~~GH-v~P~l~La~~L~~~G-h~V~~~~~~~~~~~~~~~~~~~~~ 60 (439)
|+++..+++.. -..+..|+..|++++ -.|.+++-+ ..+.+++.+.....
T Consensus 3 illvgHGSr~~~~~~~~~l~~~l~~~~~~~v~~~~lE-~~P~i~~~l~~l~~ 53 (103)
T cd03413 3 VVFMGHGTDHPSNAVYAALEYVLREEDPANVFVGTVE-GYPGLDDVLAKLKK 53 (103)
T ss_pred EEEEECCCCchhhhHHHHHHHHHHhcCCCcEEEEEEc-CCCCHHHHHHHHHH
Confidence 67888887764 468889999998876 345555555 55566666555433
No 287
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=20.88 E-value=1.1e+02 Score=27.44 Aligned_cols=36 Identities=14% Similarity=0.050 Sum_probs=30.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
-|++.-+|+.|-..-.-.||++|.+++|+|.-++..
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kd 38 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKD 38 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccchh
Confidence 355666799999999999999999999999877543
No 288
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=20.82 E-value=1.1e+02 Score=29.60 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=24.6
Q ss_pred hHHHHHHHHhcCCCCeEEEEeC-----------------------CCCcccEEEechh
Q 038151 106 QLPLENLFREIQPKPSCLISDI-----------------------KFNVPRIVFHGFS 140 (439)
Q Consensus 106 ~~~l~~~~~~~~~~pd~vv~D~-----------------------~lgiP~v~~~~~~ 140 (439)
..=+.+++.. .+||+||..+ ..||||++...++
T Consensus 89 t~F~~rvL~s--E~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNH 144 (379)
T KOG1432|consen 89 TNFVSRVLAS--EKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDRKIPWAAVLGNH 144 (379)
T ss_pred HHHHHHHHhc--cCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhcCCCeEEEeccc
Confidence 3445666666 8999999988 7899998875443
No 289
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=20.78 E-value=1.3e+02 Score=25.77 Aligned_cols=35 Identities=20% Similarity=0.149 Sum_probs=26.9
Q ss_pred CcEEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 038151 8 QLHFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTPKN 47 (439)
Q Consensus 8 ~~~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~~~ 47 (439)
..+|.++-++++||.+ |.-|++.|++|++..-+..
T Consensus 4 ~k~IAViGyGsQG~a~-----AlNLrDSG~~V~Vglr~~s 38 (165)
T PF07991_consen 4 GKTIAVIGYGSQGHAH-----ALNLRDSGVNVIVGLREGS 38 (165)
T ss_dssp TSEEEEES-SHHHHHH-----HHHHHHCC-EEEEEE-TTC
T ss_pred CCEEEEECCChHHHHH-----HHHHHhCCCCEEEEecCCC
Confidence 4689999999999965 7789999999999876644
No 290
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=20.75 E-value=1.2e+02 Score=25.87 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=23.3
Q ss_pred cCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 15 PFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 15 ~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
-+|+.|++-- .|+++|.++||+|+.++-.
T Consensus 3 V~GatG~vG~--~l~~~L~~~~~~V~~~~R~ 31 (183)
T PF13460_consen 3 VFGATGFVGR--ALAKQLLRRGHEVTALVRS 31 (183)
T ss_dssp EETTTSHHHH--HHHHHHHHTTSEEEEEESS
T ss_pred EECCCChHHH--HHHHHHHHCCCEEEEEecC
Confidence 3567777754 5899999999999999866
No 291
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=20.67 E-value=1.6e+02 Score=29.33 Aligned_cols=36 Identities=25% Similarity=0.194 Sum_probs=30.3
Q ss_pred CcEEEEecC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 038151 8 QLHFVLFPF--LIQGHIIPMIDIARLLAKQGAFVTIVT 43 (439)
Q Consensus 8 ~~~il~~~~--p~~GHv~P~l~La~~L~~~Gh~V~~~~ 43 (439)
+++|+.+.. |+.|=..-.+.||..|+.+|++|.++=
T Consensus 120 ~~~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlID 157 (405)
T PRK13869 120 HLQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVD 157 (405)
T ss_pred CceEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEc
Confidence 456555554 899999999999999999999999983
No 292
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=20.62 E-value=4.5e+02 Score=23.73 Aligned_cols=33 Identities=24% Similarity=0.094 Sum_probs=24.3
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAFVTIVTTP 45 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~V~~~~~~ 45 (439)
|.++++ |+.|.+- .+++++|+++|++|.++...
T Consensus 16 k~vlIt-Gas~gIG--~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 16 KVAIVT-GGNTGLG--QGYAVALAKAGADIIITTHG 48 (258)
T ss_pred CEEEEe-CCCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 455554 4455555 78899999999999988665
No 293
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=20.47 E-value=1.8e+02 Score=26.48 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=26.6
Q ss_pred EEEEecCCCccCHHHHHHHHHHHHhCCCe
Q 038151 10 HFVLFPFLIQGHIIPMIDIARLLAKQGAF 38 (439)
Q Consensus 10 ~il~~~~p~~GHv~P~l~La~~L~~~Gh~ 38 (439)
-|+|+-.|..|--.....|.+.|+++|+.
T Consensus 3 LVvi~G~P~SGKstrA~~L~~~l~~~~~K 31 (281)
T KOG3062|consen 3 LVVICGLPCSGKSTRAVELREALKERGTK 31 (281)
T ss_pred eEEEeCCCCCCchhHHHHHHHHHHhhccc
Confidence 47888889999999999999999999985
No 294
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=20.21 E-value=1e+02 Score=29.37 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=29.9
Q ss_pred hhccCCcceeeecCChhhHHHHHH----cCCCEeccccccc
Q 038151 314 ILSHPTVGGFLTHCGWNSVLEAVS----NGLPMVTWPFFAD 350 (439)
Q Consensus 314 ll~~~~~~~~I~HgG~gs~~eal~----~GvP~v~~P~~~D 350 (439)
.|..-+++++|.=||.||...|.. .++|+|.+|-.-|
T Consensus 86 ~l~~~~Id~Li~IGGdgs~~~a~~L~e~~~i~vigiPkTID 126 (301)
T TIGR02482 86 NLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIPVIGLPGTID 126 (301)
T ss_pred HHHHcCCCEEEEeCCchHHHHHHHHHHhhCCCEEeeccccc
Confidence 355678888999999999877753 7999999998655
No 295
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=20.13 E-value=1.4e+02 Score=31.39 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=45.5
Q ss_pred hhhhhccCCcceeeecC-Chh-hHHHHHHcCCCEeccccc-cchhhhHH--HHHHHhceeEEecccCCCcccCCCCHHHH
Q 038151 311 QVVILSHPTVGGFLTHC-GWN-SVLEAVSNGLPMVTWPFF-ADQFCNEK--LVVQVLRIGVSIGAERPLHLADEVKKEAV 385 (439)
Q Consensus 311 ~~~ll~~~~~~~~I~Hg-G~g-s~~eal~~GvP~v~~P~~-~DQ~~na~--rv~~~~G~G~~~~~~~~~~~~~~~~~~~l 385 (439)
+.+++.-++++.|-+-= =|| |-+||+++|+|.|.-=.. +-++.+-. .- +..|+-+.-++. .+.++.
T Consensus 463 Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~-~~~GV~VvdR~~--------~n~~e~ 533 (633)
T PF05693_consen 463 YYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP-EEYGVYVVDRRD--------KNYDES 533 (633)
T ss_dssp HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH-GGGTEEEE-SSS--------S-HHHH
T ss_pred HHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC-cCCcEEEEeCCC--------CCHHHH
Confidence 44444445553332210 133 889999999999987542 11221111 11 244554444443 666666
Q ss_pred HHHHHHhhc-----CCCccHHHHHHHHHHHHHH
Q 038151 386 EKAVNMLMD-----EGGEGDERRRRAKEYGEMA 413 (439)
Q Consensus 386 ~~ai~~vl~-----~~~~~~~~r~~a~~l~~~~ 413 (439)
.+.|...|- +.++....|++|++|++.+
T Consensus 534 v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 534 VNQLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 666655542 2333446777777777653
No 296
>PF01470 Peptidase_C15: Pyroglutamyl peptidase This is family C15 in the peptidase classification. ; InterPro: IPR000816 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C15 (pyroglutamyl peptidase I, clan CF). The type example being pyroglutamyl peptidase I of Bacillus amyloliquefaciens. Pyroglutamyl/pyrrolidone carboxyl peptidase (Pcp or PYRase) is an exopeptidase that hydrolytically removes the pGlu from pGlu-peptides or pGlu-proteins [, ]. PYRase has been found in prokaryotes and eukaryotes where at least two different classes have been characterised: the first containing bacterial and animal type I PYRases, and the second containing animal type II and serum PYRases. Type I and bacterial PYRases are soluble enzymes, while type II PYRases are membrane-bound. The primary application of PYRase has been its utilisation for protein or peptide sequencing, and bacterial diagnosis []. The conserved residues Cys-144 and His-168 have been identified by inhibition and mutagenesis studies [, ].; GO: 0006508 proteolysis; PDB: 1A2Z_A 1IU8_A 3RNZ_A 3RO0_D 1AUG_D 2EBJ_A 3LAC_A 1X12_B 1Z8X_B 1X10_C ....
Probab=20.11 E-value=1.5e+02 Score=26.38 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=19.8
Q ss_pred cEEEEecCCCccC--HHHHHHHHHHHHhC
Q 038151 9 LHFVLFPFLIQGH--IIPMIDIARLLAKQ 35 (439)
Q Consensus 9 ~~il~~~~p~~GH--v~P~l~La~~L~~~ 35 (439)
||||+.-|+-.|+ +||.-.++++|.+.
T Consensus 1 m~ILvTGFgpF~~~~~NpS~~~v~~L~~~ 29 (202)
T PF01470_consen 1 MRILVTGFGPFGGVPVNPSWELVKRLPGE 29 (202)
T ss_dssp EEEEEEEE-S-TT-SS-HHHHHHHHHTTS
T ss_pred CEEEEecccCCCCCCCChHHHHHHHcCCC
Confidence 6899998855544 79999999999853
Done!