BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038154
(293 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 237 bits (604), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 180/288 (62%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE++D DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 68 VKLLDVIHTENKLYLVFEHVDQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 127 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 127 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 179/289 (61%), Gaps = 3/289 (1%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE + EG YG V++A DS G V +K+I + EG+PS+ IRE+SLLKEL H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L++V S + LVFE ++ DL + T ++ +IK YL+Q+L GVA+CH
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS-QIKIYLYQLLRGVAHCHQHR 139
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
ILHRDLKP N LI+ S +K+ADFGLAR +P+ +YT + +L Y+AP+ L+GS +YS
Sbjct: 140 ILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEM+T + LF L IFSI+GTP+ P
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
K ++++ G +G+DLL MLC DP+KR++AR+A+ H YFKD
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/289 (43%), Positives = 179/289 (61%), Gaps = 3/289 (1%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE + EG YG V++A DS G V +K+I + EG+PS+ IRE+SLLKEL H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L++V S + LVFE ++ DL + T ++ +IK YL+Q+L GVA+CH
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS-QIKIYLYQLLRGVAHCHQHR 139
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
ILHRDLKP N LI+ S +K+ADFGLAR +P+ +YT + +L Y+AP+ L+GS +YS
Sbjct: 140 ILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEM+T + LF L IFSI+GTP+ P
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF 258
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
K ++++ G +G+DLL MLC DP+KR++AR+A+ H YFKD
Sbjct: 259 QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 126 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 244
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 127 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 126 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 244
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 69 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 127
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 128 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 187 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 246
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 247 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 127 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 179/288 (62%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YS
Sbjct: 131 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 249
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 250 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 125 VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 244 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 179/288 (62%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YS
Sbjct: 131 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 249
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 250 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 127 VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 179/288 (62%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YS
Sbjct: 128 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 247 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 70 LDVIHTENKLYLVFEFLSMDLKDFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 128
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YST V
Sbjct: 129 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 188 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 247
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 248 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 179/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE++ DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 67 LDVIHTENKLYLVFEHVHQDLKTFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 126 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 244
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 71 LDVIHTENKLYLVFEFLSMDLKDFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 129
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YST V
Sbjct: 130 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 248
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 249 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 235 bits (599), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 178/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+++CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLSFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 127 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YST V
Sbjct: 127 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V + KI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 127 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V + KI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 67 LDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 125
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ YT + +L Y+APE LLG YST V
Sbjct: 126 RDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 244
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 123 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 242 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 124 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 243 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 123 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 242 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 234 bits (597), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 124 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 243 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 124 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 243 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 127 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 127 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 126 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 125 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 244 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 125 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 244 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 126 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 234 bits (596), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 125 VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 243
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 244 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 234 bits (596), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/285 (46%), Positives = 177/285 (62%), Gaps = 4/285 (1%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
+E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NIV+L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQEILH 123
L+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS +LH
Sbjct: 68 LDVIHTENKLYLVFEFLHQDLKDFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHRVLH 126
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YST V
Sbjct: 127 RDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 184 DVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRS 243
D+W++ C FAEMVT + LF L IF +GTPD P P +
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWA 245
Query: 244 PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 R-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 234 bits (596), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 128 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 246
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 247 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 234 bits (596), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 126 VLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 245 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 233 bits (595), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/288 (45%), Positives = 178/288 (61%), Gaps = 4/288 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E I EG YG V++A + LTG+ V +KKI + +EGVPS+ IRE+SLLKEL H NI
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLHQILHGVAYCHSQE 120
V+LL+V + + + LVFE L DL FM +T PL IK YL Q+L G+A+CHS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+ ++ +K+ADFGLAR VP+ Y + +L Y+APE LLG YS
Sbjct: 127 VLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T VD+W++ C FAEMVT + LF L IF +GTPD P P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ +D + VV L+ DG LL +ML DP+KR++A+ AL H +F+D
Sbjct: 246 KWAR-QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE I EG YG V++A ++ G+T +KKI + EG+PS+ IRE+S+LKELKH N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV+L +V + + LVFE+LD DL + ++ + K +L Q+L+G+AYCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYCHDRR 120
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+R ++ KIADFGLAR +P+ YT + +L Y+AP+ L+GS +YS
Sbjct: 121 VLHRDLKPQNLLINREGEL-KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T +D+W+V C FAEMV LF L IF I+GTP+S+ P P
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP---NVTELPKYDP 236
Query: 241 NRSPIKDL--ATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N + + L + + GL+ G+DLL +ML LDP++R+TA++AL H YFK+
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE I EG YG V++A ++ G+T +KKI + EG+PS+ IRE+S+LKELKH N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV+L +V + + LVFE+LD DL + ++ + K +L Q+L+G+AYCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYCHDRR 120
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+R ++ KIADFGLAR +P+ YT + +L Y+AP+ L+GS +YS
Sbjct: 121 VLHRDLKPQNLLINREGEL-KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T +D+W+V C FAEMV LF L IF I+GTP+S+ P P
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWP---NVTELPKYDP 236
Query: 241 NRSPIKDL--ATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N + + L + + GL+ G+DLL +ML LDP++R+TA++AL H YFK+
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 184/290 (63%), Gaps = 8/290 (2%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE I EG YG V++A ++ G+T +KKI + EG+PS+ IRE+S+LKELKH N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV+L +V + + LVFE+LD DL + ++ + K +L Q+L+G+AYCH +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYCHDRR 120
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+R ++ KIADFGLAR +P+ YT + +L Y+AP+ L+GS +YS
Sbjct: 121 VLHRDLKPQNLLINREGEL-KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
T +D+W+V C FAEMV LF L IF I+GTP+S+ P P
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP---NVTELPKYDP 236
Query: 241 NRSPIKDL--ATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N + + L + + GL+ G+DLL +ML LDP++R+TA++AL H YFK+
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE I EG YG V +A + T + V +K++ + + EGVPSS +RE+ LLKELKH+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVRL +V S + LVFE D DL + + +P +K +L Q+L G+ +CHS+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+R+ ++ K+ADFGLAR +P+ Y+ + +L Y+ P+ L G+ YS
Sbjct: 122 VLHRDLKPQNLLINRNGEL-KLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 181 TPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXX 239
T +D+W+ C FAE+ R LF L IF ++GTP E P
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWP-SMTKLPDYKPY 239
Query: 240 PNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P L VV L G DLL+ +L +P +R++A EAL+H YF DF
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 207 bits (526), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 168/290 (57%), Gaps = 4/290 (1%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y LE I EG YG V +A + T + V +K++ + + EGVPSS +RE+ LLKELKH+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVRL +V S + LVFE D DL + + +P +K +L Q+L G+ +CHS+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+LHRDLKP N LI+R+ ++ K+A+FGLAR +P+ Y+ + +L Y+ P+ L G+ YS
Sbjct: 122 VLHRDLKPQNLLINRNGEL-KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 181 TPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXX 239
T +D+W+ C FAE+ R LF L IF ++GTP E P
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP-SMTKLPDYKPY 239
Query: 240 PNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P L VV L G DLL+ +L +P +R++A EAL+H YF DF
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 175/299 (58%), Gaps = 14/299 (4%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
++ LE + G Y V++ + TG V +K++ ++ EG PS+ IRE+SL+KELKHEN
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK-LDSEEGTPSTAIREISLMKELKHEN 64
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNP----LKIKKYLH-QILHGVAY 115
IVRL +V + + + LVFE +D DL +M + TV P L + KY Q+L G+A+
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSR-TVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLG 175
CH +ILHRDLKP N LI++ + +K+ DFGLAR +P+ ++ + +L Y+AP+ L+G
Sbjct: 124 CHENKILHRDLKPQNLLINK-RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMG 182
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXX 235
S YST +D+W+ C AEM+T + LF L IF IMGTP+ P
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242
Query: 236 XXXXPNRSPIKDLATVVG--GLEP-DG--VDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
R P +DL V+ EP DG +D L +L L+P RL+A++AL H +F ++
Sbjct: 243 NPNIQQRPP-RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 201 bits (510), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 167/291 (57%), Gaps = 8/291 (2%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY + + EG YG V++A D++T +TV +K+I + + EGVP + IREVSLLKEL+H N
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
I+ L +V + L+FE + DL +M P V+ IK +L+Q+++GV +CHS+
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMR--VIKSFLYQLINGVNFCHSRR 152
Query: 121 ILHRDLKPANFLIDRS----KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
LHRDLKP N L+ S ++KI DFGLAR +P+ +T + +L Y+ PE LLGS
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXX 236
YST VD+W++AC +AEM+ LF L IF ++G PD T P
Sbjct: 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWK 272
Query: 237 XXXPNRSPIKDLATVVGGLEPDGVDLLRR-MLCLDPSKRLTAREALRHEYF 286
P K L V+G L D L ML +DP KR++A+ AL H YF
Sbjct: 273 QSFPKFRG-KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 197 bits (502), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 163/285 (57%), Gaps = 3/285 (1%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L+ + EG Y V++ LT + V +K+I + + EG P + IREVSLLK+LKH NI
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANI 62
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L ++ + S+ LVFE LD DL ++ + N +K +L Q+L G+AYCH Q++
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNII-NMHNVKLFLFQLLRGLAYCHRQKV 121
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
LHRDLKP N LI+ ++ K+ADFGLAR +P + Y + +L Y+ P+ LLGS YST
Sbjct: 122 LHRDLKPQNLLINERGEL-KLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYST 180
Query: 182 PVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPN 241
+D+W V C F EM T + LF L IF I+GTP ET P
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYP 240
Query: 242 RSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ + L + L+ DG DLL ++L + R++A +A++H +F
Sbjct: 241 KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 159/294 (54%), Gaps = 14/294 (4%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKEL---K 57
RY + I G YG V++A D +G V +K + + N EG+P S +REV+LL+ L +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 58 HENIVRLLNVQSSVDS-----IDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H N+VRL++V ++ + + LVFE++D DL ++ P IK + Q L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ + H+ I+HRDLKP N L+ S VK+ADFGLAR + + + +L Y+APE
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVV-VTLWYRAPEV 182
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
LL S Y+TPVD+W+V C FAEM + LF L IF ++G P + P
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP--RDV 239
Query: 233 XXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P R P + + +VV +E G LL ML +P KR++A AL+H Y
Sbjct: 240 SLPRGAFPPRGP-RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 159/302 (52%), Gaps = 21/302 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDT-VVVKKIPIMNPSEGVPSSVIREVSLLKELK-- 57
+Y + I EG YG V +A D G V +K++ + EG+P S IREV++L+ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 58 -HENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
H N+VRL +V +V D LVFE++D DL ++ P IK + Q+L
Sbjct: 72 EHPNVVRLFDV-CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYK 168
G+ + HS ++HRDLKP N L+ S I K+ADFGLAR + L + + +L Y+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQI-KLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE LL S Y+TPVD+W+V C FAEM + LF L I ++G P E P
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ PI+ T + L G DLL + L +P+KR++A AL H YF+D
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDEL---GKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
Query: 289 FQ 290
+
Sbjct: 303 LE 304
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 159/302 (52%), Gaps = 21/302 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDT-VVVKKIPIMNPSEGVPSSVIREVSLLKELK-- 57
+Y + I EG YG V +A D G V +K++ + EG+P S IREV++L+ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 58 -HENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
H N+VRL +V +V D LVFE++D DL ++ P IK + Q+L
Sbjct: 72 EHPNVVRLFDV-CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYK 168
G+ + HS ++HRDLKP N L+ S I K+ADFGLAR + L + + +L Y+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQI-KLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE LL S Y+TPVD+W+V C FAEM + LF L I ++G P E P
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ PI+ T + L G DLL + L +P+KR++A AL H YF+D
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDEL---GKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
Query: 289 FQ 290
+
Sbjct: 303 LE 304
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 160/298 (53%), Gaps = 22/298 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKEL---K 57
RY + I G YG V++A D +G V +K + + N EG+P S +REV+LL+ L +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 58 HENIVRLLNVQSSVDS-----IDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H N+VRL++V ++ + + LVFE++D DL ++ P IK + Q L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG----SLCYK 168
+ + H+ I+HRDLKP N L+ S VK+ADFGLAR + +Y + +L Y+
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLAR-----IYSYQMALAPVVVTLWYR 178
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE LL S Y+TPVD+W+V C FAEM + LF L IF ++G P + P
Sbjct: 179 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP- 236
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P R P + + +VV +E G LL ML +P KR++A AL+H Y
Sbjct: 237 -RDVSLPRGAFPPRGP-RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 168 bits (425), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 160/296 (54%), Gaps = 18/296 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKEL---K 57
RY + I G YG V++A D +G V +K + + N EG+P S +REV+LL+ L +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 58 HENIVRLLNVQSSVDS-----IDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H N+VRL++V ++ + + LVFE++D DL ++ P IK + Q L G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYKAP 170
+ + H+ I+HRDLKP N L+ S VK+ADFGLAR + L+ + +L Y+AP
Sbjct: 125 LDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVV---TLWYRAP 180
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E LL S Y+TPVD+W+V C FAEM + LF L IF ++G P + P
Sbjct: 181 EVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP--R 237
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P R P + + +VV +E G LL ML +P KR++A AL+H Y
Sbjct: 238 DVSLPRGAFPPRGP-RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 157/299 (52%), Gaps = 21/299 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDT-VVVKKIPIMNPSEGVPSSVIREVSLLKELK-- 57
+Y + I EG YG V +A D G V +K++ + EG+P S IREV++L+ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 58 -HENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
H N+VRL +V +V D LVFE++D DL ++ P IK + Q+L
Sbjct: 72 EHPNVVRLFDV-CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYK 168
G+ + HS ++HRDLKP N L+ S I K+ADFGLAR + L + + +L Y+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQI-KLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE LL S Y+TPVD+W+V C FAEM + LF L I ++G P E P
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
+ PI+ T + L G DLL + L +P+KR++A AL H YF+
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDEL---GKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE---GVPSSVIREVSLLKELK 57
RY L+ + EG++ V++A D T V +KKI + + SE G+ + +RE+ LL+EL
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
H NI+ LL+ +I LVF+ ++ DL +K V P IK Y+ L G+ Y H
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVL-TPSHIKAYMLMTLQGLEYLH 129
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
ILHRDLKP N L+D + ++K+ADFGLA+ P Y + + Y+APE L G+
Sbjct: 130 QHWILHRDLKPNNLLLDEN-GVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y VD+WAV C AE++ L IF +GTP E P
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT 248
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
P L + D +DL++ + +P R+TA +AL+ +YF +
Sbjct: 249 F--KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L + Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 195
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 292 LD 293
D
Sbjct: 316 PD 317
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L I G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 142
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 292 LD 293
D
Sbjct: 319 PD 320
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 86
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 143
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 199
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 292 LD 293
D
Sbjct: 320 PD 321
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 91
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 148
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 204
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
Query: 292 LD 293
D
Sbjct: 325 PD 326
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 142
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 292 LD 293
D
Sbjct: 319 PD 320
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--KPFQSIIHAKRTYRELRLLKHMKH 92
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 149
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 205
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 292 LD 293
D
Sbjct: 326 PD 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 91
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 148
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 204
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 264
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 324
Query: 292 LD 293
D
Sbjct: 325 PD 326
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 100
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 157
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 213
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 292 LD 293
D
Sbjct: 334 PD 335
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 100
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 157
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 213
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 292 LD 293
D
Sbjct: 334 PD 335
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 133
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 189
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 292 LD 293
D
Sbjct: 310 PD 311
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 99
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 156
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 212
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 292 LD 293
D
Sbjct: 333 PD 334
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 103
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 160
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMXGYV---ATRWYRAPEI 216
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
Query: 292 LD 293
D
Sbjct: 337 PD 338
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 92
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 149
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 205
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 292 LD 293
D
Sbjct: 326 PD 327
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 92
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 149
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 205
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 265
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 325
Query: 292 LD 293
D
Sbjct: 326 PD 327
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 142
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 292 LD 293
D
Sbjct: 319 PD 320
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 86
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 143
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 199
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 259
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 319
Query: 292 LD 293
D
Sbjct: 320 PD 321
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 103
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 160
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 216
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 276
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 336
Query: 292 LD 293
D
Sbjct: 337 PD 338
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 90
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 147
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 203
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 263
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 264 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 323
Query: 292 LD 293
D
Sbjct: 324 PD 325
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 77
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 134
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 190
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
Query: 292 LD 293
D
Sbjct: 311 PD 312
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 78
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 135
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 191
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 251
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 252 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 311
Query: 292 LD 293
D
Sbjct: 312 PD 313
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 14/300 (4%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L + G YG+V A D+ TG V VKK+ S RE+ LLK +KHEN
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 61 IVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
++ LL+V + S++ LV + DL + +K + + ++ ++QIL G+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRGLK 145
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE +L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEIML 201
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 261
Query: 235 XXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
+ P + A V G P VDLL +ML LD KR+TA +AL H YF + D
Sbjct: 262 RNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K++ + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGL R D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSEL-KILDFGLCRHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 133
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 189
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 292 LD 293
D
Sbjct: 310 PD 311
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 77
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 134
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 190
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 250
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 310
Query: 292 LD 293
D
Sbjct: 311 PD 312
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 195
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 292 LD 293
D
Sbjct: 316 PD 317
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 153/300 (51%), Gaps = 14/300 (4%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L + G YG+V A D+ TG V VKK+ S RE+ LLK +KHEN
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 61 IVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
++ LL+V + S++ LV + DL + +K + + ++ ++QIL G+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRGLK 145
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE +L
Sbjct: 146 YIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEIML 201
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA 261
Query: 235 XXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
+ P + A V G P VDLL +ML LD KR+TA +AL H YF + D
Sbjct: 262 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 321
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 195
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 292 LD 293
D
Sbjct: 316 PD 317
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 195
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 255
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 315
Query: 292 LD 293
D
Sbjct: 316 PD 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 144
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
Query: 292 LD 293
D
Sbjct: 321 PD 322
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 157/297 (52%), Gaps = 17/297 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG---VPSSVIREVSLLKELK 57
RY + I G YG V++A D +G V +K + + N G +P S +REV+LL+ L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 58 ---HENIVRLLNVQSSVDS-----IDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQI 109
H N+VRL++V ++ + + LVFE++D DL ++ P IK + Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 110 LHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKA 169
L G+ + H+ I+HRDLKP N L+ S VK+ADFGLAR + T +L Y+A
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMA-LTPVVVTLWYRA 187
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE LL S Y+TPVD+W+V C FAEM + LF L IF ++G P + P
Sbjct: 188 PEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-- 244
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P R P + + +VV +E G LL ML +P KR++A AL+H Y
Sbjct: 245 RDVSLPRGAFPPRGP-RPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 99
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 156
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 212
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 272
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 332
Query: 292 LD 293
D
Sbjct: 333 PD 334
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 85
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 142
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 258
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 318
Query: 292 LD 293
D
Sbjct: 319 PD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 79
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 136
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 192
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 252
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 253 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 312
Query: 292 LD 293
D
Sbjct: 313 PD 314
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 157 bits (396), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + + + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMAGFV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + ++ ++QIL G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDH---VQFLIYQILRG 133
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 189
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 292 LD 293
D
Sbjct: 310 PD 311
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 133
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + + + Y+APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMAGFV---ATRWYRAPEI 189
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309
Query: 292 LD 293
D
Sbjct: 310 PD 311
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + + + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMAGFV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI D+GLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDYGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 151/294 (51%), Gaps = 16/294 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L+ + G YGAV A D TG V +KK+ SE RE+ LLK ++HEN+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 62 VRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ LL+V + +++D LV + DL MK E +I+ ++Q+L G+ Y
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED---RIQFLVYQMLKGLRY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLG 175
H+ I+HRDLKP N ++ ++ KI DFGLAR D + + + Y+APE +L
Sbjct: 144 IHAAGIIHRDLKPGNLAVNEDCEL-KILDFGLARQADSEMXGXVV---TRWYRAPEVILN 199
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXX 235
RY+ VD+W+V C AEM+T + LF L I + GTP +E +
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259
Query: 236 XXXX--PNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
P KD A+++ P V+LL +ML LD +R+TA EAL H YF+
Sbjct: 260 NYMKGLPELEK-KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 155/302 (51%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + T + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTD---DEMTGXVATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DF LAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFYLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI FGLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILGFGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 144
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR + Y + Y+APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTADEMTGYV---ATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
Query: 292 LD 293
D
Sbjct: 321 PD 322
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 100
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 157
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + + Y+APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMXGXV---ATRWYRAPEI 213
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 273
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 333
Query: 292 LD 293
D
Sbjct: 334 PD 335
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 154 bits (389), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 144
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR + Y + Y+APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTADEMTGYV---ATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
Query: 292 LD 293
D
Sbjct: 321 PD 322
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 24/307 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHEN 60
+ L ++ EG YG V A TG+ V +KKI P P + +RE+ +LK KHEN
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--RTLREIKILKHFKHEN 70
Query: 61 IVRLLNVQ-----SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + N+Q + + + ++ E + DL + T+ + I+ +++Q L V
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH---IQYFIYQTLRAVKV 127
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG----------SL 165
H ++HRDLKP+N LI+ + D+ K+ DFGLAR ID + + G +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDL-KVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP--DS 223
Y+APE +L S +YS +DVW+ C AE+ + +F R L IF I+GTP D+
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 224 ETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
+ P L + + P G+DLL+RML DP+KR+TA+EAL H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 284 EYFKDFQ 290
Y + +
Sbjct: 307 PYLQTYH 313
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 24/307 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHEN 60
+ L ++ EG YG V A TG+ V +KKI P P + +RE+ +LK KHEN
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--RTLREIKILKHFKHEN 70
Query: 61 IVRLLNVQ-----SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + N+Q + + + ++ E + DL + T+ + I+ +++Q L V
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH---IQYFIYQTLRAVKV 127
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG----------SL 165
H ++HRDLKP+N LI+ + D+ K+ DFGLAR ID + + G +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDL-KVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP--DS 223
Y+APE +L S +YS +DVW+ C AE+ + +F R L IF I+GTP D+
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 224 ETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
+ P L + + P G+DLL+RML DP+KR+TA+EAL H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 284 EYFKDFQ 290
Y + +
Sbjct: 307 PYLQTYH 313
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 24/307 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHEN 60
+ L ++ EG YG V A TG+ V +KKI P P + +RE+ +LK KHEN
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFAL--RTLREIKILKHFKHEN 70
Query: 61 IVRLLNVQ-----SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + N+Q + + + ++ E + DL + T+ + I+ +++Q L V
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH---IQYFIYQTLRAVKV 127
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG----------SL 165
H ++HRDLKP+N LI+ + D+ K+ DFGLAR ID + + G +
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDL-KVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP--DS 223
Y+APE +L S +YS +DVW+ C AE+ + +F R L IF I+GTP D+
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 224 ETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
+ P L + + P G+DLL+RML DP+KR+TA+EAL H
Sbjct: 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306
Query: 284 EYFKDFQ 290
Y + +
Sbjct: 307 PYLQTYH 313
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 87
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 144
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR + Y + Y+APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTADEMTGYV---ATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 260
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 320
Query: 292 LD 293
D
Sbjct: 321 PD 322
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 13/289 (4%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
+ G YG+V A D +G+ V +KK+ SE RE+ LLK ++HEN++ LL+V
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 68 QSSVDSIDLVFENLDFDL-LHFMKTEPT----VTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ S+ + DF L + FM+T+ + + KI+ ++Q+L G+ Y HS ++
Sbjct: 92 FTPASSLRNFY---DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVV 148
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLKP N ++ ++ KI DFGLAR D + Y + + Y+APE +L Y+
Sbjct: 149 HRDLKPGNLAVNEDCEL-KILDFGLARHADAEMTGYVV---TRWYRAPEVILSWMHYNQT 204
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP-N 241
VD+W+V C AEM+T + LF + L I + G P +E +
Sbjct: 205 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 264
Query: 242 RSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQ 290
++P KD + P DLL +ML LD KRLTA +AL H +F+ F+
Sbjct: 265 QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 154 bits (388), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 151/289 (52%), Gaps = 13/289 (4%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
+ G YG+V A D +G+ V +KK+ SE RE+ LLK ++HEN++ LL+V
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 68 QSSVDSIDLVFENLDFDL-LHFMKTEPT----VTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ S+ + DF L + FM+T+ + + KI+ ++Q+L G+ Y HS ++
Sbjct: 110 FTPASSLRNFY---DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVV 166
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLKP N ++ ++ KI DFGLAR D + Y + + Y+APE +L Y+
Sbjct: 167 HRDLKPGNLAVNEDCEL-KILDFGLARHADAEMTGYVV---TRWYRAPEVILSWMHYNQT 222
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP-N 241
VD+W+V C AEM+T + LF + L I + G P +E +
Sbjct: 223 VDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLP 282
Query: 242 RSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQ 290
++P KD + P DLL +ML LD KRLTA +AL H +F+ F+
Sbjct: 283 QTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI D GLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDAGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI D GLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDGGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V A D+ TG V VKK+ P + + RE+ LLK +KH
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI D GLAR D + Y + Y+APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDRGLARHTDDEMTGYV---ATRWYRAPEI 193
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I ++GTP +E L
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 253
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P + A V G P VDLL +ML LD KR+TA +AL H YF +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 313
Query: 292 LD 293
D
Sbjct: 314 PD 315
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 149/295 (50%), Gaps = 17/295 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y L ++ EG YG V + + TG V +KK + + V +RE+ LLK+L+HEN
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+V LL V LVFE +D +L ++ P + ++KYL QI++G+ +CHS
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQV-VQKYLFQIINGIGFCHSHN 144
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
I+HRD+KP N L+ +S +VK+ DFG AR + P E Y + + Y+APE L+G +Y
Sbjct: 145 IIHRDIKPENILVSQS-GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGT--PDSETL--PXXXXXXXXX 236
VDVWA+ C EM + LF L I +G P + L
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 237 XXXPNRSPIK----DLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
R P++ L+ VV +DL ++ L +DP KR E L H++F+
Sbjct: 264 PEIKEREPLERRYPKLSEVV-------IDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 154/302 (50%), Gaps = 18/302 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV--PSSVIREVSLLKELKH 58
RY L + G YG+V ++D +G + VKK+ P + + RE+ LLK +KH
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS--RPFQSIIHAKRTYRELRLLKHMKH 109
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
EN++ LL+V + S++ LV + DL + +K + + ++ ++QIL G
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH---VQFLIYQILRG 166
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ Y HS +I+HRDLKP+N ++ ++ KI DFGLAR D + Y + Y+APE
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVNEDCEL-KILDFGLARHTDDEMTGYV---ATRWYRAPEI 222
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L Y+ VD+W+V C AE++T + LF L I + GTP + +
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSH 282
Query: 233 XXXXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+ P ++ A V G P VDLL +ML LD KR+TA EAL H YF +
Sbjct: 283 EARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342
Query: 292 LD 293
D
Sbjct: 343 PD 344
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 20/302 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y L I +G +G V +A TG V +KK+ + N EG P + +RE+ +L+ LKHEN
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 61 IVRLLNV--------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+V L+ + SI LVF+ + DL + + V +IK+ + +L+G
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN----YTIKGGSLCYK 168
+ Y H +ILHRD+K AN LI R ++K+ADFGLAR + + Y + +L Y+
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
PE LLG Y P+D+W C AEM T + LA I + G+ E P
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 229 X---XXXXXXXXXXPNRSPIKD-LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHE 284
+ +KD L V +P +DL+ ++L LDP++R+ + +AL H+
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 285 YF 286
+F
Sbjct: 315 FF 316
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 151/296 (51%), Gaps = 14/296 (4%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
R L + G YG+V A+D+ V VKK+ S RE+ LLK LKHEN
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 61 IVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
++ LL+V + SI+ LV + DL + +K++ ++ ++ ++Q+L G+
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH---VQFLVYQLLRGLK 145
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS I+HRDLKP+N ++ ++ +I DFGLAR D + Y + Y+APE +L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSEL-RILDFGLARQADEEMTGYV---ATRWYRAPEIML 201
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y+ VD+W+V C AE++ + LF L I ++GTP E L
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHA 261
Query: 235 XXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P KDL+++ G P +DLL RML LD +R++A EAL H YF +
Sbjct: 262 RTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y L I +G +G V +A TG V +KK+ + N EG P + +RE+ +L+ LKHEN
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 61 IVRLLNV--------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL-KIKKYLHQILH 111
+V L+ + SI LVF+ + DL + + K L +IK+ + +L+
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLN 135
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN----YTIKGGSLCY 167
G+ Y H +ILHRD+K AN LI R ++K+ADFGLAR + + Y + +L Y
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP 227
+ PE LLG Y P+D+W C AEM T + LA I + G+ E P
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254
Query: 228 XX---XXXXXXXXXXPNRSPIKD-LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
+ +KD L V +P +DL+ ++L LDP++R+ + +AL H
Sbjct: 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNH 312
Query: 284 EYF 286
++F
Sbjct: 313 DFF 315
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y L I +G +G V +A TG V +KK+ + N EG P + +RE+ +L+ LKHEN
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 61 IVRLLNV--------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL-KIKKYLHQILH 111
+V L+ + SI LVF+ + DL + + K L +IK+ + +L+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLN 136
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN----YTIKGGSLCY 167
G+ Y H +ILHRD+K AN LI R ++K+ADFGLAR + + Y + +L Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP 227
+ PE LLG Y P+D+W C AEM T + LA I + G+ E P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 228 XX---XXXXXXXXXXPNRSPIKD-LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
+ +KD L V +P +DL+ ++L LDP++R+ + +AL H
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 284 EYF 286
++F
Sbjct: 314 DFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 153/303 (50%), Gaps = 22/303 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y L I +G +G V +A TG V +KK+ + N EG P + +RE+ +L+ LKHEN
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 61 IVRLLNV--------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL-KIKKYLHQILH 111
+V L+ + SI LVF+ + DL + + K L +IK+ + +L+
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLN 136
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN----YTIKGGSLCY 167
G+ Y H +ILHRD+K AN LI R ++K+ADFGLAR + + Y + +L Y
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP 227
+ PE LLG Y P+D+W C AEM T + LA I + G+ E P
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 228 XX---XXXXXXXXXXPNRSPIKD-LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
+ +KD L V +P +DL+ ++L LDP++R+ + +AL H
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 284 EYF 286
++F
Sbjct: 314 DFF 316
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 153/304 (50%), Gaps = 16/304 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y ++E I G YG V A LTG V +KKIP +RE+ +LK KH+NI
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 115
Query: 62 VRLLNV------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ S+ +V + ++ DL + + +T ++ +L+Q+L G+ Y
Sbjct: 116 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE--HVRYFLYQLLRGLKY 173
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLEN---YTIKGGSLCYKAPE 171
HS +++HRDLKP+N L++ + ++ KI DFG+AR + P E+ T + Y+APE
Sbjct: 174 MHSAQVIHRDLKPSNLLVNENCEL-KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX--X 229
+L Y+ +D+W+V C F EM+ ++LF + L I ++GTP +
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P R P+ TV G + + LL RML +PS R++A ALRH + +
Sbjct: 293 ERVRAYIQSLPPRQPVP-WETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351
Query: 290 QSLD 293
D
Sbjct: 352 HDPD 355
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 18/300 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L+ I EG YG V A+D + V +KKI + +RE+ +L +HEN
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE-HQTYCQRTLREIQILLRFRHEN 102
Query: 61 IVRLLNV--QSSVDSIDLVF---ENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
++ + ++ S+++++ V+ + ++ DL +K++ + I +L+QIL G+ Y
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDH---ICYFLYQILRGLKY 159
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYT----IKGGSLCYKAPE 171
HS +LHRDLKP+N LI+ + D+ KI DFGLAR D P ++T + Y+APE
Sbjct: 160 IHSANVLHRDLKPSNLLINTTCDL-KICDFGLARIAD-PEHDHTGFLTEXVATRWYRAPE 217
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XX 229
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + A + + +DLL RML +P+KR+T EAL H Y + +
Sbjct: 278 MKARNYLQSLPSKTKVA-WAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQY 336
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 150/296 (50%), Gaps = 14/296 (4%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
R L + G YG+V A+D+ V VKK+ S RE+ LLK LKHEN
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 61 IVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
++ LL+V + SI+ LV + DL + +K + ++ ++ ++Q+L G+
Sbjct: 89 VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH---VQFLVYQLLRGLK 145
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS I+HRDLKP+N ++ ++ +I DFGLAR D + Y + Y+APE +L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDSEL-RILDFGLARQADEEMTGYV---ATRWYRAPEIML 201
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y+ VD+W+V C AE++ + LF L I ++GTP E L
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHA 261
Query: 235 XXXXXP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P KDL+++ G P +DLL RML LD +R++A EAL H YF +
Sbjct: 262 RTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQY 317
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 153/304 (50%), Gaps = 16/304 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y ++E I G YG V A LTG V +KKIP +RE+ +LK KH+NI
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI 116
Query: 62 VRLLNV------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ S+ +V + ++ DL + + +T ++ +L+Q+L G+ Y
Sbjct: 117 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE--HVRYFLYQLLRGLKY 174
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLEN---YTIKGGSLCYKAPE 171
HS +++HRDLKP+N L++ + ++ KI DFG+AR + P E+ T + Y+APE
Sbjct: 175 MHSAQVIHRDLKPSNLLVNENCEL-KIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX--X 229
+L Y+ +D+W+V C F EM+ ++LF + L I ++GTP +
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 293
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P R P+ TV G + + LL RML +PS R++A ALRH + +
Sbjct: 294 ERVRAYIQSLPPRQPVP-WETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 352
Query: 290 QSLD 293
D
Sbjct: 353 HDPD 356
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 149/292 (51%), Gaps = 14/292 (4%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
L + G YG+V A+D+ V VKK+ S RE+ LLK LKHEN++ L
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGL 84
Query: 65 LNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
L+V + SI+ LV + DL + +K + ++ ++ ++Q+L G+ Y HS
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH---VQFLVYQLLRGLKYIHS 141
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
I+HRDLKP+N ++ ++ +I DFGLAR D + Y + Y+APE +L
Sbjct: 142 AGIIHRDLKPSNVAVNEDCEL-RILDFGLARQADEEMTGYV---ATRWYRAPEIMLNWMH 197
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
Y+ VD+W+V C AE++ + LF L I ++GTP E L
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYI 257
Query: 239 XP-NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P KDL+++ G P +DLL RML LD +R++A EAL H YF +
Sbjct: 258 QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQY 309
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYXQRTLREIKILLRFRHEN 86
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 263 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 263 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 80
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 137
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P+ E L
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINL 256
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 257 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 314
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 18/300 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYT----IKGGSLCYKAPE 171
HS +LHRDLKP+N L++ + D+ KI DFGLAR D P ++T + Y+APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVAD-PDHDHTGFLXEXVATRWYRAPE 201
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XX 229
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 262 LKARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 141 bits (355), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 18/300 (6%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 87
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 144
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYT----IKGGSLCYKAPE 171
HS +LHRDLKP+N L++ + D+ KI DFGLAR D P ++T + Y+APE
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVAD-PDHDHTGFLXEXVATRWYRAPE 202
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XX 229
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 262
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 263 LKARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 321
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 5/295 (1%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y + I EG YG V + + TG V +KK + +RE+ +LK+LKH N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+V LL V + LVFE D +LH + L +K Q L V +CH
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHL-VKSITWQTLQAVNFCHKHN 122
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+HRD+KP N LI + ++K+ DFG AR + P + Y + + Y++PE L+G +Y
Sbjct: 123 CIHRDVKPENILITKHS-VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMG--TPDSETLPXXXXXXXXXXX 238
PVDVWA+ C FAE+++ L+ + L I +G P + +
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV-FSTNQYFSGVK 240
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
P+ ++ L + + LL+ L +DP++RLT + L H YF++ + ++
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 80
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 137
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 256
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 257 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 314
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 87
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 144
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 264 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 321
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 88
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 145
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 264
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 265 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 322
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 79
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 136
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 255
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 256 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 313
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 263 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX--XX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 259 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 259 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDL-KIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX--XX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINL 258
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 259 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLAFRHEN 84
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 141
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTSDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL 260
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y +
Sbjct: 261 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 259 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 84
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 141
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 261 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V ++KI + +RE+ +L +HEN
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 263 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 152/299 (50%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 102
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + LV + DL +KT+ + I +L+QIL G+ Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDH---ICYFLYQILRGLKY 159
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTXDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 279 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 90
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 147
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 148 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 266
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 267 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 324
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 82
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 259 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 154/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 102
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 159
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 279 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 336
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D++ V +KKI + +RE+ +L +HEN
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLAFRHEN 84
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +KT+ + I +L+QIL G+ Y
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH---ICYFLYQILRGLKY 141
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y +
Sbjct: 261 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQY 318
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 153/299 (51%), Gaps = 16/299 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RYT L I EG YG V A+D+L V +KKI + +RE+ +L +HEN
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHEN 86
Query: 61 IVRLLNVQSS-----VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ + ++ + + + +V + ++ DL +K + + I +L+QIL G+ Y
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH---ICYFLYQILRGLKY 143
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN---YTIKGGSLCYKAPER 172
HS +LHRDLKP+N L++ + D+ KI DFGLAR D ++ T + Y+APE
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDL-KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP--XXX 230
+L S Y+ +D+W+V C AEM++++ +F + L I I+G+P E L
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P+++ + + + +DLL +ML +P KR+ +AL H Y + +
Sbjct: 263 KARNYLLSLPHKNKVP-WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 156/353 (44%), Gaps = 69/353 (19%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY + +I G YG V A+D L V +KKI + ++RE+++L L H++
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 61 IVRLLNVQ-----SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+V++L++ D + +V E D D +T +T+ L IK L+ +L GV Y
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTE--LHIKTLLYNLLVGVKY 171
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYT---------------- 159
HS ILHRDLKPAN L+++ VK+ DFGLAR +D P +
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCS-VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTF 230
Query: 160 ---------IKGGSLC--YKAPERLLGSGRYSTPVDVWAVACTFAEMVT----------- 197
+ G + Y+APE +L Y+ +DVW++ C FAE++
Sbjct: 231 PHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290
Query: 198 --------------------HQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
+ FH+R L IF+I+GTP E +
Sbjct: 291 RGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRY 350
Query: 238 XX--PNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
P R DLA D + LL+RML +P+KR+T E L H +FK+
Sbjct: 351 IRIFPKREGT-DLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L+ + G G V A D+ V +KKI + +P +RE+ +++ L H+N
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS--VKHALREIKIIRRLDHDN 69
Query: 61 IVRLLNVQ--------------SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYL 106
IV++ + + ++S+ +V E ++ DL + ++ P + ++ + ++
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHA---RLFM 126
Query: 107 HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG--- 163
+Q+L G+ Y HS +LHRDLKPAN I+ ++KI DFGLAR +D +Y+ KG
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD---PHYSHKGHLSE 183
Query: 164 ---SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGT 220
+ Y++P LL Y+ +D+WA C FAEM+T + LF + I +
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 221 PDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREA 280
E P K L ++ G+ + VD L ++L P RLTA EA
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 281 LRHEYF 286
L H Y
Sbjct: 304 LSHPYM 309
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 144/280 (51%), Gaps = 36/280 (12%)
Query: 41 GVPSSVIREVSLLKELKHENIVRLLNV-QSSVD-SIDLVFENLDFDLLHFMKTE--PTVT 96
G+ S RE++LL+ELKH N++ L V S D + L+F+ + DL H +K
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN 119
Query: 97 KNPLK-----IKKYLHQILHGVAYCHSQEILHRDLKPANFLI-----DRSKDIVKIADFG 146
K P++ +K L+QIL G+ Y H+ +LHRDLKPAN L+ +R + VKIAD G
Sbjct: 120 KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR--VKIADMG 177
Query: 147 LARPIDVPLENYTIKGG---SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFH 203
AR + PL+ + Y+APE LLG+ Y+ +D+WA+ C FAE++T + +FH
Sbjct: 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
Query: 204 SR---------WAPGLLAAIFSIMGTP------DSETLPXXXXXXX--XXXXXPNRSPIK 246
R + L IF++MG P D + +P N S IK
Sbjct: 238 CRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIK 297
Query: 247 DLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ + LL+++L +DP KR+T+ +A++ YF
Sbjct: 298 YMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 145/300 (48%), Gaps = 21/300 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V +A + D V +KK+ + RE+ +++ +KH N+
Sbjct: 42 YTNCKVIGNGSFGVVFQAK-LVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNV 94
Query: 62 VRLLNV-QSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
V L S+ D D VF NL + + H+ K + T+ L IK Y++Q+L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM--LLIKLYMYQLLR 152
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ I + E S Y+APE
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK-ILIAGEPNVSXICSRYYRAPE 211
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y+T +D+W+ C AE++ Q LF L I ++GTP E +
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI-KTMN 270
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
P P PD +DL+ R+L PS RLTA EAL H +F + ++
Sbjct: 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 153/344 (44%), Gaps = 61/344 (17%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + +I G YG V+ A+D T V +KK+ M ++RE+++L LK + I
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 62 VRLLNV-----QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
+RL ++ D + +V E D DL KT +T+ IK L+ +L G +
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEE--HIKTILYNLLLGENFI 145
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLE----------------NYTI 160
H I+HRDLKPAN L+++ VK+ DFGLAR I+ + N +
Sbjct: 146 HESGIIHRDLKPANCLLNQDCS-VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 161 KGG------SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT----------------- 197
K + Y+APE +L Y+ +D+W+ C FAE++
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 198 -----------HQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX--XXXXXXXXPNRSP 244
+ + H + L IF+I+GTP + L P+R P
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP 324
Query: 245 IKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
I +L + DG++LL ML +P+KR+T +AL H Y KD
Sbjct: 325 I-NLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKXVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 252 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 310 ISVDDALQHPY 320
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKXVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 252 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 310 ISVDDALQHPY 320
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKXVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 252 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 310 ISVDDALQHPY 320
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 75
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 131
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 187
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 188 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 244
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 245 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 303 ISVDDALQHPY 313
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 45/332 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HE 59
+Y L++ + +G YG V ++ D TG+ V VKKI + RE+ +L EL HE
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 60 NIVRLLNVQSSVDSID--LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV LLNV + + D LVF+ ++ DL ++ P+ + ++Q++ + Y H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLH 126
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--------DVPL------ENY----- 158
S +LHRD+KP+N L++ ++ VK+ADFGL+R ++PL EN+
Sbjct: 127 SGGLLHRDMKPSNILLN-AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 159 --TIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
T + Y+APE LLGS +Y+ +D+W++ C E++ + +F L I
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 217 IMGTPDSETLPXXXXXXXXXXXXP-------NRSPIKDLATVVGGL----------EPDG 259
++ P +E + +S +D+ T L +
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 260 VDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
+DLL ++L +P+KR++A +AL+H + F +
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFVSIFHN 337
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDXTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 252 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 310 ISVDDALQHPY 320
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 148/311 (47%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A D++ G V VKK+ P N + RE+ LLK + H
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA--KRAYRELVLLKCVNH 80
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L + E + ++ L+Q+L G
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCG 136
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + + Y + + Y+AP
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTASTNFMMTPYVV---TRYYRAP 192
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C E+V +F + +GTP +E +
Sbjct: 193 EVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR +A L PD + DLL +ML +DP KR
Sbjct: 252 PTVRNYVE--NRPAYPGIA--FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 307
Query: 275 LTAREALRHEY 285
++ EALRH Y
Sbjct: 308 ISVDEALRHPY 318
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 120
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 176
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 232
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 233 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 289
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 290 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 347
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 348 ISVDDALQHPY 358
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 120
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 176
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 232
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 233 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 289
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 290 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 347
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 348 ISVDDALQHPY 358
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 83
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 195
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 196 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 252
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 253 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 310
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 311 ISVDDALQHPY 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 83
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 195
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 196 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 252
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 253 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 310
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 311 ISVDDALQHPY 321
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 81
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 137
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 193
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 194 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 250
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 251 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 308
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 309 ISVDDALQHPY 319
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 252 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 310 ISVDDALQHPY 320
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 251
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 252 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 309
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 310 ISVDDALQHPY 320
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 75
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 131
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 187
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 188 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 244
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 245 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 303 ISVDDALQHPY 313
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 147/311 (47%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A D++ G V VKK+ P N + RE+ LLK + H
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA--KRAYRELVLLKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L + E + ++ L+Q+L G
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARP--IDVPLENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTACTNFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y+ VD+W+V C E+V +F + +GTP +E +
Sbjct: 195 EVILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
+ P L PD + DLL +ML +DP KR
Sbjct: 254 PTVRNYVENRPKYP----GIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 309
Query: 275 LTAREALRHEY 285
++ EALRH Y
Sbjct: 310 ISVDEALRHPY 320
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 132
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 188
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 189 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 245
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 246 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 303
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 304 ISVDDALQHPY 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + +++ LV E +D +L ++ E + ++ L+Q+L G
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 132
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 188
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 189 EVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM--KK 245
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGV----------------DLLRRMLCLDPSKR 274
NR L L PD + DLL +ML +DP+KR
Sbjct: 246 LQPTVRNYVENRPKYAGLT--FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 303
Query: 275 LTAREALRHEY 285
++ +AL+H Y
Sbjct: 304 ISVDDALQHPY 314
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 145/307 (47%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D+V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 192
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 248 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 304 SFFDELR 310
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 190
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 247
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 248 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 302 AHSFFDELR 310
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 141/299 (47%), Gaps = 20/299 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 192
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-REMN 251
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQ 290
P P+ + L R+L P+ RLT EA H +F + +
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 142/301 (47%), Gaps = 24/301 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 190
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-RE 249
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P P+ + L R+L P+ RLT EA H +F +
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 290 Q 290
+
Sbjct: 310 R 310
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 150/347 (43%), Gaps = 64/347 (18%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + +I G YG V+ A+D V +KK+ M ++RE+++L LK + I
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 62 VRLLNV-----QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
+RL ++ D + +V E D DL KT +T+ +K L+ +L G +
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQ--HVKTILYNLLLGEKFI 147
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLE-------------------N 157
H I+HRDLKPAN L+++ VKI DFGLAR I+ + N
Sbjct: 148 HESGIIHRDLKPANCLLNQDCS-VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 158 YTIKGG------SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQR----------- 200
+K + Y+APE +L Y+ +D+W+ C FAE++ +
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 201 LF-----------------HSRWAPGLLAAIFSIMGTPDSETLP--XXXXXXXXXXXXPN 241
LF H + L IF+++GTP E L P
Sbjct: 267 LFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPT 326
Query: 242 RSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
R I DL+ + +G+DLL ML + KR+T +AL H Y KD
Sbjct: 327 RDGI-DLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 83
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 141
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 200
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 255
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 256 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 311
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 312 SFFDELR 318
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 145
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 204
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 259
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 260 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 316 SFFDELR 322
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 94
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 152
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 211
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 266
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 267 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 322
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 323 SFFDELR 329
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 76
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 134
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 193
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 248
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 249 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 304
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 305 SFFDELR 311
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 192
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 248 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 304 SFFDELR 310
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 192
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 248 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 304 SFFDELR 310
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 87
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 145
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 204
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 259
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 260 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 315
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 316 SFFDELR 322
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 79
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 137
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 196
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 251
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 252 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 307
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 308 SFFDELR 314
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 33/307 (10%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 87
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 143
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 199
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL---- 226
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 200 EVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 258
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPD--------GVDLLRRMLCLDPSKRLTAR 278
P S K V+ + + DLL +ML +D SKR++
Sbjct: 259 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 318
Query: 279 EALRHEY 285
EAL+H Y
Sbjct: 319 EALQHPY 325
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 103
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 161
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 218
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 275
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 276 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 329
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 330 AHSFFDELR 338
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 167
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSXICSRYYRAPE 226
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 281
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 282 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 338 SFFDELR 344
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 80
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 138
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 195
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 252
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 253 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 307 AHSFFDELR 315
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 33/307 (10%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 76
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 132
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 188
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL---- 226
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 189 EVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPD--------GVDLLRRMLCLDPSKRLTAR 278
P S K V+ + + DLL +ML +D SKR++
Sbjct: 248 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 307
Query: 279 EALRHEY 285
EAL+H Y
Sbjct: 308 EALQHPY 314
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 75
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 133
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRYYRAPE 192
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 247
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 248 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 304 SFFDELR 310
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 154
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 212
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 269
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 326
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 327 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 380
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 381 AHSFFDELR 389
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 36/307 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 88
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 146
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+AY HS I HRD+KP N L+D ++K+ DFG A+ + V E S Y+APE
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSYICSRYYRAPE 205
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+ G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI----- 260
Query: 232 XXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
PN + K P+ + L R+L P+ RLT EA H
Sbjct: 261 ----REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 316
Query: 284 EYFKDFQ 290
+F + +
Sbjct: 317 SFFDELR 323
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 113
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 171
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 228
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 285
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 286 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 339
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 340 AHSFFDELR 348
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 109
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 167
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 224
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 281
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 282 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 336 AHSFFDELR 344
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 40/309 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YT +VI G +G V++A +G+ V +KK+ + RE+ ++++L H NI
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN------RELQIMRKLDHCNI 111
Query: 62 VRL-LNVQSSVDSIDLVFENLDFDLL---------HFMKTEPTVTKNPLKIKKYLHQILH 111
VRL SS + D V+ NL D + H+ + + T+ + +K Y++Q+
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV--IYVKLYMYQLFR 169
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKA 169
+AY HS I HRD+KP N L+D ++K+ DFG A+ + P +Y S Y+A
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 226
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXX 229
PE + G+ Y++ +DVW+ C AE++ Q +F L I ++GTP E +
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI--- 283
Query: 230 XXXXXXXXXXPNRSPIKD--------LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREAL 281
PN + K P+ + L R+L P+ RLT EA
Sbjct: 284 ------REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 337
Query: 282 RHEYFKDFQ 290
H +F + +
Sbjct: 338 AHSFFDELR 346
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 33/307 (10%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR +E + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL---- 226
E +LG G Y VD+W+V C EMV H+ LF R + +GTP E +
Sbjct: 195 EVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPD--------GVDLLRRMLCLDPSKRLTAR 278
P S K V+ + + DLL +ML +D SKR++
Sbjct: 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 279 EALRHEY 285
EAL+H Y
Sbjct: 314 EALQHPY 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 23/310 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG----------VPSSVIREVS 51
YT+ I G YGAV DS G V +K++ S+G + V+RE+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRV-FNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 52 LLKELKHENIVRLLNV-----QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYL 106
LL H NI+ L ++ + ++ + LV E + DL + + V +P I+ ++
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI-SPQHIQYFM 140
Query: 107 HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC 166
+ IL G+ H ++HRDL P N L+ + DI I DF LAR D N T
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT-ICDFNLARE-DTADANKTHYVTHRW 198
Query: 167 YKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
Y+APE ++ ++ VD+W+ C AEM + LF L I ++GTP E +
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 227 PXXXXXXXXXXXXPNRS--PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHE 284
+ S P + VV +P +DL+ +ML +P +R++ +ALRH
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
Query: 285 YFKD-FQSLD 293
YF+ F LD
Sbjct: 319 YFESLFDPLD 328
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 146/311 (46%), Gaps = 41/311 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR +E + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EMV H+ LF R + +GTP P
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP----CPAFM 249
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPD----------------GVDLLRRMLCLDPSKR 274
+ K L PD DLL +ML +D SKR
Sbjct: 250 KKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 275 LTAREALRHEY 285
++ EAL+H Y
Sbjct: 310 ISVDEALQHPY 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 23/310 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG----------VPSSVIREVS 51
YT+ I G YGAV DS G V +K++ S+G + V+RE+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRV-FNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 52 LLKELKHENIVRLLNV-----QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYL 106
LL H NI+ L ++ + ++ + LV E + DL + + V +P I+ ++
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI-SPQHIQYFM 140
Query: 107 HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC 166
+ IL G+ H ++HRDL P N L+ + DI I DF LAR D N T
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT-ICDFNLARE-DTADANKTHYVTHRW 198
Query: 167 YKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
Y+APE ++ ++ VD+W+ C AEM + LF L I ++GTP E +
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258
Query: 227 PXXXXXXXXXXXXPNRS--PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHE 284
+ S P + VV +P +DL+ +ML +P +R++ +ALRH
Sbjct: 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
Query: 285 YFKD-FQSLD 293
YF+ F LD
Sbjct: 319 YFESLFDPLD 328
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKVVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKVVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 146/307 (47%), Gaps = 33/307 (10%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL---- 226
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPD--------GVDLLRRMLCLDPSKRLTAR 278
P S K V+ + + DLL +ML +D SKR++
Sbjct: 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 279 EALRHEY 285
EAL+H Y
Sbjct: 314 EALQHPY 320
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 145/305 (47%), Gaps = 29/305 (9%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPER 172
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR T + + Y+APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPEVVTRYYRAPEV 196
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL----PX 228
+LG G Y VD+W+V C EM+ LF + +GTP E + P
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPD--------GVDLLRRMLCLDPSKRLTAREA 280
S K V+ + + DLL +ML +D SKR++ EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 281 LRHEY 285
L+H Y
Sbjct: 316 LQHPY 320
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 146/307 (47%), Gaps = 33/307 (10%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 83
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 139
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 195
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL---- 226
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 196 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPD--------GVDLLRRMLCLDPSKRLTAR 278
P S K V+ + + DLL +ML +D SKR++
Sbjct: 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314
Query: 279 EALRHEY 285
EAL+H Y
Sbjct: 315 EALQHPY 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 148/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKCVNH 84
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 140
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + + + + Y+AP
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSFMMVPFVV---TRYYRAP 196
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V C EM+ LF + +GTP E +
Sbjct: 197 EVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 255
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 256 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 307
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 308 ASKRISVDEALQHPY 322
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKVVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 49/315 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKH 58
RY L+ I G G V A+D++ V +KK+ P N + RE+ L+K + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA--KRAYRELVLMKVVNH 82
Query: 59 ENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
+NI+ LLNV + S++ +V E +D +L ++ E + ++ L+Q+L G
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVG 138
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP--LENYTIKGGSLCYKAP 170
+ + HS I+HRDLKP+N ++ +S +KI DFGLAR + Y + + Y+AP
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV-KSDATLKILDFGLARTAGTSFMMTPYVV---TRYYRAP 194
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E +LG G Y VD+W+V EM+ LF + +GTP E +
Sbjct: 195 EVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 231 XXXXXXXXXPNRSPIKDLATVVG----GLEPD----------------GVDLLRRMLCLD 270
R+ +++ G L PD DLL +ML +D
Sbjct: 254 PTV--------RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 271 PSKRLTAREALRHEY 285
SKR++ EAL+H Y
Sbjct: 306 ASKRISVDEALQHPY 320
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKHE 59
Y +++ + EG +G V A+ + TG V +K I ++ S+ + + RE+S L+ L+H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHP 64
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+I++L +V S D I +V E +L ++ +++ + +++ QI+ V YCH
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIISAVEYCHRH 122
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSG 177
+I+HRDLKP N L+D + VKIADFGL+ ++ + +K GS Y APE + G
Sbjct: 123 KIVHRDLKPENLLLDEHLN-VKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
VDVW+ M+ + F P L I + TLP
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVYTLPKF-------- 225
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
L P L++RML ++P R++ E ++ ++FK
Sbjct: 226 -----------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKHE 59
Y +++ + EG +G V A+ + TG V +K I ++ S+ + + RE+S L+ L+H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHP 68
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+I++L +V S D I +V E +L ++ +++ + +++ QI+ V YCH
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIISAVEYCHRH 126
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSG 177
+I+HRDLKP N L+D + VKIADFGL+ ++ + +K GS Y APE + G
Sbjct: 127 KIVHRDLKPENLLLDEHLN-VKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
VDVW+ M+ + F P L I + TLP
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVYTLPKF-------- 229
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
L P L++RML ++P R++ E ++ ++FK
Sbjct: 230 -----------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKHE 59
Y +++ + EG +G V A+ + TG V +K I ++ S+ + + RE+S L+ L+H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHP 73
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+I++L +V S D I +V E +L ++ +++ + +++ QI+ V YCH
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIISAVEYCHRH 131
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSG 177
+I+HRDLKP N L+D + VKIADFGL+ ++ + +K GS Y APE + G
Sbjct: 132 KIVHRDLKPENLLLDEHLN-VKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
VDVW+ M+ + F P L I + TLP
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVYTLPKF-------- 234
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
L P L++RML ++P R++ E ++ ++FK
Sbjct: 235 -----------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKI--PIMNPSEGVPSSVIREVSLLKELKHE 59
Y +++ + EG +G V A+ + TG V +K I ++ S+ + + RE+S L+ L+H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-MQGRIEREISYLRLLRHP 74
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+I++L +V S D I +V E +L ++ +++ + +++ QI+ V YCH
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRFFQQIISAVEYCHRH 132
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSG 177
+I+HRDLKP N L+D + VKIADFGL+ ++ + +K GS Y APE + G
Sbjct: 133 KIVHRDLKPENLLLDEHLN-VKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
VDVW+ M+ + F P L I + TLP
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI-----SNGVYTLPKF-------- 235
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
L P L++RML ++P R++ E ++ ++FK
Sbjct: 236 -----------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 27/299 (9%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH-EN 60
Y L+ + G+Y V A + + VVVK I+ P + + + RE+ +L+ L+ N
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK---ILKPVK--KNKIKREIKILENLRGGPN 93
Query: 61 IVRLLNVQSSVDSID--LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
I+ L ++ S LVFE N DF L+ T+ I+ Y+++IL + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDY 146
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLG 175
CHS I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVD 205
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y +D+W++ C A M+ + FH L I ++GT D
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 235 XXXXXP--NRSPIKDLATVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
R K V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 56/330 (16%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y+L + + G +G V D +G +KK+ P RE+ ++K L H N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLDHVN 61
Query: 61 IVRLLNV--------------------------------------QSSVDSIDLVFENLD 82
I++L++ S ++++ E +
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 83 FDLLH-----FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSK 137
D LH F+++ ++ N + I Y++Q+ V + HS I HRD+KP N L++
Sbjct: 122 -DTLHKVLKSFIRSGRSIPMNLISI--YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 138 DIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ +K+ DFG A+ + +P E S Y+APE +LG+ Y+ +D+W++ C F E++
Sbjct: 179 NTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237
Query: 198 HQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEP 257
+ LF + L I IMGTP E + ++ KD ++ P
Sbjct: 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKA--KDWRKILPEGTP 295
Query: 258 D-GVDLLRRMLCLDPSKRLTAREALRHEYF 286
+DLL ++L +P R+ EA+ H +F
Sbjct: 296 SLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 43/290 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIP--IMNPSEGVPSSVIREVSLLKELKHE 59
Y + E + EG +G V A T V +K I ++ S+ + V RE+S LK L+H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSD-MHMRVEREISYLKLLRHP 69
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+I++L +V ++ I +V E +L ++ + +T++ + +++ QI+ + YCH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTED--EGRRFFQQIICAIEYCHRH 127
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSG 177
+I+HRDLKP N L+D + + VKIADFGL+ ++ + +K GS Y APE + G
Sbjct: 128 KIVHRDLKPENLLLDDNLN-VKIADFGLS---NIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS-IMGTPDSETLPXXXXXXXXX 236
VDVW+ M+ + F + P L + S + PD
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF------------- 230
Query: 237 XXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L P L+RRM+ DP +R+T +E R +F
Sbjct: 231 ------------------LSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 33/311 (10%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R+ + + +G +G V + TG +V +KK+ I +P RE+ ++++L
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-IQDPR-----FRNRELQIMQDLAVLH 77
Query: 58 HENIVRLLNVQSSVDS-------IDLVFENLDFDLLH-----FMKTEPTVTKNPLKIKKY 105
H NIV+L + ++ +++V E + D LH + + + V P+ IK +
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQ--VAPPPILIKVF 134
Query: 106 LHQILHGVAYCH--SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG 163
L Q++ + H S + HRD+KP N L++ + +K+ DFG A+ + P E
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYIC 193
Query: 164 SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDS 223
S Y+APE + G+ Y+T VD+W+V C FAEM+ + +F + G L I ++G P
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
Query: 224 ETL----PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTARE 279
E L P S + ++ E DLL +L P +R+ E
Sbjct: 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKE--AYDLLSALLQYLPEERMKPYE 311
Query: 280 ALRHEYFKDFQ 290
AL H YF +
Sbjct: 312 ALCHPYFDELH 322
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 132/298 (44%), Gaps = 42/298 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPI--MNPSEGVPSSVI-REVSLLKELKH 58
Y L EVI +G + V R + TG VK + + S G+ + + RE S+ LKH
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHF---MKTEPTVTKNPLKIKKYLHQILHGVAY 115
+IV LL SS + +VFE +D L F + + + Y+ QIL + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 116 CHSQEILHRDLKPANFLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLC---YKAP 170
CH I+HRD+KP N L+ ++ VK+ DFG+A + E+ + GG + + AP
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG---ESGLVAGGRVGTPHFMAP 202
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E ++ Y PVDVW LF LL+ GT E L
Sbjct: 203 E-VVKREPYGKPVDVWGCGVI---------LFI------LLSGCLPFYGT--KERLFEGI 244
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
S I + A DL+RRML LDP++R+T EAL H + K+
Sbjct: 245 IKGKYKMNPRQWSHISESAK----------DLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 139
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 198
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 234 XXXXXXP-----NRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 287 KDFQS 291
+ ++
Sbjct: 319 QQVRA 323
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 140
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 141 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 199
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXX-- 231
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 259
Query: 232 ---XXXXXXXXPNRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 260 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
Query: 287 KDFQS 291
+ ++
Sbjct: 320 QQVRA 324
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 139
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 198
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 234 XXXXXXP-----NRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 287 KDFQS 291
+ ++
Sbjct: 319 QQVRA 323
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 139
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 198
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 234 XXXXXXP-----NRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 287 KDFQS 291
+ ++
Sbjct: 319 QQVRA 323
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 139
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 198
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXX-- 231
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 232 ---XXXXXXXXPNRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 287 KDFQS 291
+ ++
Sbjct: 319 QQVRA 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 139
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 198
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 234 XXXXXXP-----NRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 287 KDFQS 291
+ ++
Sbjct: 319 QQVRA 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 139
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 140 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 198
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 199 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 258
Query: 234 XXXXXXP-----NRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 259 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
Query: 287 KDFQS 291
+ ++
Sbjct: 319 QQVRA 323
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 141
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 142 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 200
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXX-- 231
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 201 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 260
Query: 232 ---XXXXXXXXPNRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 261 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 320
Query: 287 KDFQS 291
+ ++
Sbjct: 321 QQVRA 325
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 160
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 161 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 219
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXX-- 231
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 220 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIE 279
Query: 232 ---XXXXXXXXPNRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 280 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 339
Query: 287 KDFQS 291
+ ++
Sbjct: 340 QQVRA 344
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 21/245 (8%)
Query: 60 NIVRLLNVQSSVDSI--DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NIV+LL++ S L+FE N DF +L+ PT+T I+ Y++++L +
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTD--YDIRYYIYELLKALD 140
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHSQ I+HRD+KP N +ID +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 141 YCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-PGKEYNVRVASRYFKGPELLV 199
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXX-- 231
Y +D+W++ C FA M+ + F+ L I ++GT
Sbjct: 200 DLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIE 259
Query: 232 ---XXXXXXXXPNRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+R P + P+ +D L ++L D +RLTA EA+ H YF
Sbjct: 260 LDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
Query: 287 KDFQS 291
+ ++
Sbjct: 320 QQVRA 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 29/244 (11%)
Query: 60 NIVRLLN-VQSSVDSI-DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NI++L++ V+ V LVFE N DF L+ + T+ I+ Y++++L +
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD-------FDIRFYMYELLKALD 146
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHS+ I+HRD+KP N +ID + +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH-PAQEYNVRVASRYFKGPELLV 205
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C A M+ + FH + L I ++GT +
Sbjct: 206 DYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEEL----YGYLKK 261
Query: 234 XXXXXXPNRSPI------KDLATVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALR 282
P+ + I K + + P+ +DLL ++L D +RLTA+EA+
Sbjct: 262 YHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME 321
Query: 283 HEYF 286
H YF
Sbjct: 322 HPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 29/244 (11%)
Query: 60 NIVRLLN-VQSSVDSI-DLVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
NI++L++ V+ V LVFE N DF L+ + T+ I+ Y++++L +
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTD-------FDIRFYMYELLKALD 151
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
YCHS+ I+HRD+KP N +ID + +++ D+GLA P + Y ++ S +K PE L+
Sbjct: 152 YCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH-PAQEYNVRVASRYFKGPELLV 210
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
Y +D+W++ C A M+ + FH + L I ++GT +
Sbjct: 211 DYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEEL----YGYLKK 266
Query: 234 XXXXXXPNRSPI------KDLATVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALR 282
P+ + I K + + P+ +DLL ++L D +RLTA+EA+
Sbjct: 267 YHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME 326
Query: 283 HEYF 286
H YF
Sbjct: 327 HPYF 330
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 52/303 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ ++ +G +G V + D +T VK I + S+++REV LLK+L H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKY--------LHQILHG 112
I++L + S +V E + T + +K K++ + Q+ G
Sbjct: 83 IMKLFEILEDSSSFYIVGE---------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 113 VAYCHSQEILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKG--GSLCYK 168
+ Y H I+HRDLKP N L++ + KD +KI DFGL+ +N +K G+ Y
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYI 190
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE L G+ Y DVW+ +++ F+ + +L + + D
Sbjct: 191 APEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD------ 242
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
P I D D DL+R+ML PS R+TA + L H + +
Sbjct: 243 ----------LPQWRTISD----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
Query: 289 FQS 291
+ S
Sbjct: 283 YSS 285
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 52/303 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ ++ +G +G V + D +T VK I + S+++REV LLK+L H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKY--------LHQILHG 112
I++L + S +V E + T + +K K++ + Q+ G
Sbjct: 83 IMKLFEILEDSSSFYIVGE---------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 113 VAYCHSQEILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKG--GSLCYK 168
+ Y H I+HRDLKP N L++ + KD +KI DFGL+ +N +K G+ Y
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYI 190
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE L G+ Y DVW+ +++ F+ + +L + + D
Sbjct: 191 APEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD------ 242
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
P I D D DL+R+ML PS R+TA + L H + +
Sbjct: 243 ----------LPQWRTISD----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
Query: 289 FQS 291
+ S
Sbjct: 283 YSS 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 52/303 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ ++ +G +G V + D +T VK I + S+++REV LLK+L H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKY--------LHQILHG 112
I++L + S +V E + T + +K K++ + Q+ G
Sbjct: 83 IMKLFEILEDSSSFYIVGE---------LYTGGELFDEIIKRKRFSEHDAARIIKQVFSG 133
Query: 113 VAYCHSQEILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKG--GSLCYK 168
+ Y H I+HRDLKP N L++ + KD +KI DFGL+ +N +K G+ Y
Sbjct: 134 ITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYI 190
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE L G+ Y DVW+ +++ F+ + +L + + D
Sbjct: 191 APEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD------ 242
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
P I D D DL+R+ML PS R+TA + L H + +
Sbjct: 243 ----------LPQWRTISD----------DAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
Query: 289 FQS 291
+ S
Sbjct: 283 YSS 285
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N L
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVL 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 110 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 162
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 163 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 281
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 282 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 109 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 161
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 162 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 110 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 162
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 163 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 281
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 282 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 116 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 168
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 169 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 227
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 228 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 287
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 288 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 76 LVFE---NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFL 132
LVFE N DF L+ T+ I+ Y+++IL + YCHS I+HRD+KP N +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTD-------YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 133 IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTF 192
ID +++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C
Sbjct: 164 IDHEHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
Query: 193 AEMVTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLA 249
A M+ + FH L I ++GT D R K
Sbjct: 223 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 282
Query: 250 TVVGG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
V + P+ +D L ++L D RLTAREA+ H YF
Sbjct: 283 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 7 VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
V+ +G YG V+ D + +K+IP + P + E++L K LKH+NIV+ L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLG 86
Query: 67 VQSSVDSIDLVFENLDFDLLHFM---KTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
S I + E + L + K P + N I Y QIL G+ Y H +I+H
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGP-LKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 124 RDLKPANFLIDRSKDIVKIADFGLAR---PIDVPLENYTIKGGSLCYKAPERL-LGSGRY 179
RD+K N LI+ ++KI+DFG ++ I+ E +T G+L Y APE + G Y
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRGY 202
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSI 217
D+W++ CT EM T + F+ P AA+F +
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEP--QAAMFKV 238
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 7 VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
V+ +G YG V+ D + +K+IP + P + E++L K LKH+NIV+ L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLG 72
Query: 67 VQSSVDSIDLVFENLDFDLLHFM---KTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
S I + E + L + K P + N I Y QIL G+ Y H +I+H
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGP-LKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 124 RDLKPANFLIDRSKDIVKIADFGLAR---PIDVPLENYTIKGGSLCYKAPERL-LGSGRY 179
RD+K N LI+ ++KI+DFG ++ I+ E +T G+L Y APE + G Y
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGPRGY 188
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSI 217
D+W++ CT EM T + F+ P AA+F +
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEP--QAAMFKV 224
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 13/219 (5%)
Query: 76 LVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDR 135
LVFE+++ F + T+T I+ Y+++IL + YCHS I+HRD+KP N +ID
Sbjct: 111 LVFEHVN--NTDFKQLRQTLTD--YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH 166
Query: 136 SKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEM 195
+++ D+GLA P + Y ++ S +K PE L+ Y +D+W++ C A M
Sbjct: 167 EHRKLRLIDWGLAEFYH-PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 225
Query: 196 VTHQR-LFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP--NRSPIKDLATVV 252
+ + FH L I ++GT D R K V
Sbjct: 226 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 285
Query: 253 GG-----LEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ P+ +D L ++L D RLTAREA+ H YF
Sbjct: 286 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPI--MNPSEGVPSSVI-REVSLLKELKH 58
Y L EVI +G + V R + TG VK + + S G+ + + RE S+ LKH
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHF---MKTEPTVTKNPLKIKKYLHQILHGVAY 115
+IV LL SS + +VFE +D L F + + + Y+ QIL + Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 116 CHSQEILHRDLKPANFLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLC---YKAP 170
CH I+HRD+KP L+ ++ VK+ FG+A + E+ + GG + + AP
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG---ESGLVAGGRVGTPHFMAP 204
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E ++ Y PVDVW LF LL+ GT E L
Sbjct: 205 E-VVKREPYGKPVDVWGCGVI---------LFI------LLSGCLPFYGT--KERLFEGI 246
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
S I + A DL+RRML LDP++R+T EAL H + K+
Sbjct: 247 IKGKYKMNPRQWSHISESAK----------DLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 31/284 (10%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
E++ GR+G VH+ ++ TG + K I + V E+S++ +L H N+++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD--KEEVKNEISVMNQLDHANLIQLY 152
Query: 66 NVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRD 125
+ S + I LV E +D L + + L ++ QI G+ + H ILH D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 126 LKPANFL-IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVD 184
LKP N L ++R +KI DFGLAR P E + G+ + APE ++ S P D
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPE-VVNYDFVSFPTD 270
Query: 185 VWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSP 244
+W+V A LL+ + +G D+ETL R
Sbjct: 271 MWSVGVI---------------AYMLLSGLSPFLGDNDAETLNNILAC---------RWD 306
Query: 245 IKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
++D + + + + ++L + S R++A EAL+H + D
Sbjct: 307 LED--EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 130/298 (43%), Gaps = 42/298 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPI--MNPSEGVPSSVI-REVSLLKELKH 58
Y L EVI +G + V R + TG VK + + S G+ + + RE S+ LKH
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHF---MKTEPTVTKNPLKIKKYLHQILHGVAY 115
+IV LL SS + +VFE +D L F + + + Y+ QIL + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 116 CHSQEILHRDLKPANFLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLC---YKAP 170
CH I+HRD+KP L+ ++ VK+ FG+A + E+ + GG + + AP
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG---ESGLVAGGRVGTPHFMAP 202
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXX 230
E ++ Y PVDVW LF LL+ GT E L
Sbjct: 203 E-VVKREPYGKPVDVWGCGVI---------LFI------LLSGCLPFYGT--KERLFEGI 244
Query: 231 XXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
S I + A DL+RRML LDP++R+T EAL H + K+
Sbjct: 245 IKGKYKMNPRQWSHISESAK----------DLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 124
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 125 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 184 AEPVDVWSCGIVLTAMLAGE 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 44/292 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE----GVPSSVIREVSLLKELK 57
Y L + + G +G V LTG V VK I+N + V + RE+ LK +
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK---ILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +I++L V S+ I +V E + +L ++ + + + ++ QIL GV YC
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK--ESRRLFQQILSGVDYC 132
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H ++HRDLKP N L+D + KIADFGL+ + E GS Y APE + G
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMN-AKIADFGLSNMMS-DGEFLRXSCGSPNYAAPEVISGR 190
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIF-SIMGTPDSETLPXXXXXXXX 235
VD+W+ ++ F P L I I TP
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY------------ 238
Query: 236 XXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
L P + LL+ ML +DP KR T ++ HE+FK
Sbjct: 239 -------------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG YG V A + +T + V VK I M + P ++ +E+ + L HEN+
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 127 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR- 63
+ V+ +G +G V +A ++L +KKI +E S+++ EV LL L H+ +VR
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 64 ---------LLNVQSSVDSIDLVFENLDF-------DLLHFMKTEPTVTKNPLKIKKYLH 107
+ ++V +F +++ DL+H + + + +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH----SENLNQQRDEYWRLFR 123
Query: 108 QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPL------------ 155
QIL ++Y HSQ I+HRDLKP N ID S++ VKI DFGLA+ + L
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 156 --ENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMV 196
+N T G+ Y A E L G+G Y+ +D++++ F EM+
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 39/223 (17%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR- 63
+ V+ +G +G V +A ++L +KKI +E S+++ EV LL L H+ +VR
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 64 ---------LLNVQSSVDSIDLVFENLDF-------DLLHFMKTEPTVTKNPLKIKKYLH 107
+ ++V +F +++ DL+H + + + +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH----SENLNQQRDEYWRLFR 123
Query: 108 QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPL------------ 155
QIL ++Y HSQ I+HRDLKP N ID S++ VKI DFGLA+ + L
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 156 --ENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMV 196
+N T G+ Y A E L G+G Y+ +D++++ F EM+
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V VK I + + REV ++K L H NI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 62 VRLLNVQSSVDSIDLVFEN------LDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVA 114
V+L V + ++ LV E D+ + H +MK + K QI+ V
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK--------FRQIVSAVQ 120
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKAPER 172
YCH + I+HRDLK N L+D +I KIADFG + L+ + GS Y APE
Sbjct: 121 YCHQKFIVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFC---GSPPYAAPEL 176
Query: 173 LLGSGRYSTP-VDVWAVACTFAEMVT 197
G +Y P VDVW++ +V+
Sbjct: 177 FQGK-KYDGPEVDVWSLGVILYTLVS 201
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ L++ + EG G V A + +T + V VK I M + P ++ +E+ + K L HEN+
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V+ + + L E L F + EP + +++ HQ++ GV Y H I
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGRY 179
HRD+KP N L+D +D +KI+DFGLA + G+L Y APE L +
Sbjct: 126 THRDIKPENLLLD-ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 180 STPVDVWAVACTFAEMVTHQ 199
+ PVDVW+ M+ +
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 33/292 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV-PSSVIREVSLLKELKHE 59
RY V+ +G +G V D +TG VK I + S++REV LLK+L H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI++L LV E L F + + + + + Q+L G+ Y H
Sbjct: 93 NIMKLYEFFEDKGYFYLVGEVYTGGEL-FDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 120 EILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
+I+HRDLKP N L++ +SKD ++I DFGL+ + + K G+ Y APE L G+
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 209
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y DVW+ LL+ G + + L
Sbjct: 210 -YDEKCDVWSTGVILYI---------------LLSGCPPFNGANEYDILK-KVEKGKYTF 252
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P + + A DL+R+ML PS R++AR+AL HE+ + +
Sbjct: 253 ELPQWKKVSESAK----------DLIRKMLTYVPSMRISARDALDHEWIQTY 294
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 43/323 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE- 59
RY +L+VI +G +G V +A+D V +K ++ + E+ +L+ L+ +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALK---MVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 60 -----NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
N++ +L + + I + FE L +L +K + ++K+ H IL +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 115 YCHSQEILHRDLKPANFLI-DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+H DLKP N L+ + + +K+ DFG + + S Y+APE +
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAPEVI 271
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
LG+ RY P+D+W++ C AE++T L LA + ++G P + L
Sbjct: 272 LGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK 330
Query: 234 X--XXXXXPNRSPIKDLA---------------------------TVVGGLEPDGVDLLR 264
P + L+ + G +P +D L+
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 265 RMLCLDPSKRLTAREALRHEYFK 287
+ L DP+ R+T +ALRH + +
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 122/289 (42%), Gaps = 36/289 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E + +G + V R L G K I S + RE + + LKH NI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
VRL + S L+F+ + L F + + QIL V +CH +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 122 LHRDLKPANFLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+HRDLKP N L+ VK+ADFGLA ++ + + G+ Y +PE +L Y
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKDPY 201
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP---DSETLPXXXXXXXXX 236
PVD+WA G++ I ++G P D +
Sbjct: 202 GKPVDLWAC--------------------GVILYIL-LVGYPPFWDEDQHRLYQQIKAGA 240
Query: 237 XXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP D T P+ DL+ +ML ++PSKR+TA EAL+H +
Sbjct: 241 YDFP--SPEWDTVT------PEAKDLINKMLTINPSKRITAAEALKHPW 281
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 43/323 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE- 59
RY +L+VI +G +G V +A+D V +K ++ + E+ +L+ L+ +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALK---MVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 60 -----NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
N++ +L + + I + FE L +L +K + ++K+ H IL +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 115 YCHSQEILHRDLKPANFLI-DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+H DLKP N L+ + + +K+ DFG + + S Y+APE +
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAPEVI 271
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
LG+ RY P+D+W++ C AE++T L LA + ++G P + L
Sbjct: 272 LGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAK 330
Query: 234 X--XXXXXPNRSPIKDLA---------------------------TVVGGLEPDGVDLLR 264
P + L+ + G +P +D L+
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 265 RMLCLDPSKRLTAREALRHEYFK 287
+ L DP+ R+T +ALRH + +
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV-PSSVIREVSLLKELKHE 59
RY V+ +G +G V D +TG VK I + S++REV LLK+L H
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI++L LV E L F + + + + + Q+L G+ Y H
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGEL-FDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 120 EILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
+I+HRDLKP N L++ +SKD ++I DFGL+ + + K G+ Y APE L G+
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 227
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y DVW+ +++ F+ +L +
Sbjct: 228 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGKYTF 270
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P + + A DL+R+ML PS R++AR+AL HE+ + +
Sbjct: 271 ELPQWKKVSESAK----------DLIRKMLTYVPSMRISARDALDHEWIQTY 312
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV-PSSVIREVSLLKELKHE 59
RY V+ +G +G V D +TG VK I + S++REV LLK+L H
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI++L LV E L F + + + + + Q+L G+ Y H
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGEL-FDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 120 EILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
+I+HRDLKP N L++ +SKD ++I DFGL+ + + K G+ Y APE L G+
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 226
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y DVW+ +++ F+ +L +
Sbjct: 227 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGKYTF 269
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P + + A DL+R+ML PS R++AR+AL HE+ + +
Sbjct: 270 ELPQWKKVSESAK----------DLIRKMLTYVPSMRISARDALDHEWIQTY 311
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 127/292 (43%), Gaps = 33/292 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV-PSSVIREVSLLKELKHE 59
RY V+ +G +G V D +TG VK I + S++REV LLK+L H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI++L LV E L F + + + + + Q+L G+ Y H
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGEL-FDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 120 EILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
+I+HRDLKP N L++ +SKD ++I DFGL+ + + K G+ Y APE L G+
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT- 203
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y DVW+ +++ F+ +L +
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGKYTF 246
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P + + A DL+R+ML PS R++AR+AL HE+ + +
Sbjct: 247 ELPQWKKVSESAK----------DLIRKMLTYVPSMRISARDALDHEWIQTY 288
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 29/209 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSV---IREVSLLKELKH 58
Y LL+ I +G + V A LTG V +K I++ ++ P+S+ REV ++K L H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFEN------LDFDLLHF-MKTEPTVTKNPLKIKKYLHQILH 111
NIV+L V + ++ L+ E D+ + H MK + +K QI+
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK--------FRQIVS 122
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKA 169
V YCH + I+HRDLK N L+D +I KIADFG + V L+ + GS Y A
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDTFC---GSPPYAA 178
Query: 170 PERLLGSGRYSTP-VDVWAVACTFAEMVT 197
PE G +Y P VDVW++ +V+
Sbjct: 179 PELFQGK-KYDGPEVDVWSLGVILYTLVS 206
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPAFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 43/323 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE- 59
RY +L+VI +G +G V +A+D V +K ++ + E+ +L+ L+ +
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALK---MVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 60 -----NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
N++ +L + + I + FE L +L +K + ++K+ H IL +
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 115 YCHSQEILHRDLKPANFLI-DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+H DLKP N L+ + + +K+ DFG + + S Y+APE +
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQSRFYRAPEVI 271
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
LG+ RY P+D+W++ C AE++T L LA + ++G P + L
Sbjct: 272 LGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAK 330
Query: 234 X--XXXXXPNRSPIKDLA---------------------------TVVGGLEPDGVDLLR 264
P + L+ + G +P +D L+
Sbjct: 331 NFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLK 390
Query: 265 RMLCLDPSKRLTAREALRHEYFK 287
+ L DP+ R+T +ALRH + +
Sbjct: 391 QCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V VK I + + REV ++K L H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
V+L V + ++ LV E ++ ++ + + + K QI+ V YCH +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQKF 133
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKAPERLLGSGR 178
I+HRDLK N L+D +I KIADFG + L+ + GS Y APE G +
Sbjct: 134 IVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGK-K 188
Query: 179 YSTP-VDVWAVACTFAEMVT 197
Y P VDVW++ +V+
Sbjct: 189 YDGPEVDVWSLGVILYTLVS 208
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 126/294 (42%), Gaps = 46/294 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E + +G + V R TG K I S + RE + + LKH NI
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + + QIL V +C
Sbjct: 66 VRLH------DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
H I+HRDLKP N L+ +SK VK+ADFGLA + + + G+ Y +PE +L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VL 178
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP---DSETLPXXXX 231
Y PVD+WA G++ I ++G P D +
Sbjct: 179 RKDPYGKPVDMWAC--------------------GVILYIL-LVGYPPFWDEDQHRLYQQ 217
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP D T P+ DL+ +ML ++P+KR+TA EAL+H +
Sbjct: 218 IKAGAYDFP--SPEWDTVT------PEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V VK I + + REV ++K L H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
V+L V + ++ LV E ++ ++ + + + K QI+ V YCH +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQKF 133
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKAPERLLGSGR 178
I+HRDLK N L+D +I KIADFG + L+ + GS Y APE G +
Sbjct: 134 IVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGK-K 188
Query: 179 YSTP-VDVWAVACTFAEMVT 197
Y P VDVW++ +V+
Sbjct: 189 YDGPEVDVWSLGVILYTLVS 208
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 126/294 (42%), Gaps = 46/294 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E + +G + V R TG K I S + RE + + LKH NI
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + + QIL V +C
Sbjct: 66 VRLH------DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
H I+HRDLKP N L+ +SK VK+ADFGLA + + + G+ Y +PE +L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VL 178
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP---DSETLPXXXX 231
Y PVD+WA G++ I ++G P D +
Sbjct: 179 RKDPYGKPVDMWAC--------------------GVILYIL-LVGYPPFWDEDQHRLYQQ 217
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP D T P+ DL+ +ML ++P+KR+TA EAL+H +
Sbjct: 218 IKAGAYDFP--SPEWDTVT------PEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 125/294 (42%), Gaps = 46/294 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E I +G + V R TG K I S + RE + + LKH NI
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNI 65
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + + QIL V +C
Sbjct: 66 VRLH------DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
H ++HRDLKP N L+ + K VK+ADFGLA + + + G+ Y +PE +L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE-VL 178
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP---DSETLPXXXX 231
Y PVD+WA G++ I ++G P D +
Sbjct: 179 RKEAYGKPVDIWAC--------------------GVILYIL-LVGYPPFWDEDQHKLYQQ 217
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP D T P+ +L+ +ML ++P+KR+TA EAL+H +
Sbjct: 218 IKAGAYDFP--SPEWDTVT------PEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 129
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 187
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 188 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 231
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 232 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 129
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 187
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 188 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 231
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 232 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 40/288 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E I G + V A LTG+ V +K + +P + E+ LK L+H++I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHI 70
Query: 62 VRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+L +V + + I +V E +L ++ ++ +++ ++ QI+ VAY HSQ
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV--VFRQIVSAVAYVHSQG 128
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGL-ARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
HRDLKP N L D + K+ DFGL A+P + GSL Y APE + G
Sbjct: 129 YAHRDLKPENLLFDEYHKL-KLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP--DSETLPXXXXXXXXXX 237
+ DVW++ G+L + P D +
Sbjct: 188 GSEADVWSM--------------------GILLYVLMCGFLPFDDDNVMALYKKIMRGKY 227
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P L P + LL++ML +DP KR++ + L H +
Sbjct: 228 DVPK------------WLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 105/209 (50%), Gaps = 29/209 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSV---IREVSLLKELKH 58
Y LL+ I +G + V A LTG V +K I++ ++ P+S+ REV ++K L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIK---IIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 59 ENIVRLLNVQSSVDSIDLVFEN------LDFDLLHF-MKTEPTVTKNPLKIKKYLHQILH 111
NIV+L V + ++ L+ E D+ + H MK + +K QI+
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK--------FRQIVS 125
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKA 169
V YCH + I+HRDLK N L+D +I KIADFG + V L+ + G+ Y A
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNI-KIADFGFSNEFTVGGKLDAFC---GAPPYAA 181
Query: 170 PERLLGSGRYSTP-VDVWAVACTFAEMVT 197
PE G +Y P VDVW++ +V+
Sbjct: 182 PELFQGK-KYDGPEVDVWSLGVILYTLVS 209
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V VK I + + REV ++K L H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
V+L V + ++ LV E ++ ++ + + + K QI+ V YCH +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQKF 133
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC----YKAPERLLGS 176
I+HRDLK N L+D +I KIADFG + + K + C Y APE G
Sbjct: 134 IVHRDLKAENLLLDADMNI-KIADFGFSNEF-----TFGNKLDAFCGAPPYAAPELFQGK 187
Query: 177 GRYSTP-VDVWAVACTFAEMVT 197
+Y P VDVW++ +V+
Sbjct: 188 -KYDGPEVDVWSLGVILYTLVS 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V V+ I + + REV ++K L H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
V+L V + ++ LV E ++ ++ + + + K QI+ V YCH +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQKF 133
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKAPERLLGSGR 178
I+HRDLK N L+D +I KIADFG + L+ + GS Y APE G +
Sbjct: 134 IVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGK-K 188
Query: 179 YSTP-VDVWAVACTFAEMVT 197
Y P VDVW++ +V+
Sbjct: 189 YDGPEVDVWSLGVILYTLVS 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V V+ I + + REV ++K L H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
V+L V + ++ LV E ++ ++ + + + K QI+ V YCH +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCHQKF 133
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKAPERLLGSGR 178
I+HRDLK N L+D +I KIADFG + L+ + GS Y APE G +
Sbjct: 134 IVHRDLKAENLLLDADMNI-KIADFGFSNEFTFGNKLDEFC---GSPPYAAPELFQGK-K 188
Query: 179 YSTP-VDVWAVACTFAEMVT 197
Y P VDVW++ +V+
Sbjct: 189 YDGPEVDVWSLGVILYTLVS 208
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSV---IREVSLLKELKH 58
Y L + I +G + V A LTG V VK I++ ++ P+S+ REV ++K L H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVK---IIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 59 ENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+L V + ++ LV E ++ ++ + + + K QI+ V YCH
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK--FRQIVSAVQYCH 131
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDV--PLENYTIKGGSLCYKAPERLLG 175
+ I+HRDLK N L+D +I KIADFG + V L+ + GS Y APE G
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNI-KIADFGFSNEFTVGNKLDTFC---GSPPYAAPELFQG 187
Query: 176 SGRYSTP-VDVWAVACTFAEMVT 197
+Y P VDVW++ +V+
Sbjct: 188 K-KYDGPEVDVWSLGVILYTLVS 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG-VPSSVIREVSLLKELKHENIVRLLN 66
I G++ V+RA L G V +KK+ I + + + I+E+ LLK+L H N+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 67 VQSSVDSIDLVFENLDFDLL-----HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+ +++V E D L HF K + + + + KY Q+ + + HS+ +
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER--TVWKYFVQLCSALEHMHSRRV 157
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
+HRD+KPAN I + +VK+ D GL R G+ Y +PER+ +G Y+
Sbjct: 158 MHRDIKPANVFIT-ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG-YNF 215
Query: 182 PVDVWAVACTFAEMVTHQRLFHS 204
D+W++ C EM Q F+
Sbjct: 216 KSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 137/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G++ V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNP----SEGVPSSVIREVSLLKELK 57
Y L + + G +G V LTG V VK I+N S V + RE+ LK +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVK---ILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +I++L V S+ +V E + +L ++ V + ++ ++ QIL V YC
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE--MEARRLFQQILSAVDYC 127
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H ++HRDLKP N L+D + KIADFGL+ + E GS Y APE + S
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMN-AKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVI--S 183
Query: 177 GR-YSTP-VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAI-FSIMGTPDSETLPXXXXXX 233
GR Y+ P VD+W+ ++ F P L I + P+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----------- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
NRS +AT LL ML +DP KR T ++ HE+FK
Sbjct: 233 -----YLNRS----VAT-----------LLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y E + G + V + + TG +KK + GV I REVS+LKE++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HENIVRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L V + + L+ E + +L F+ + ++T+ + ++L QIL+GV Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE--EATEFLKQILNGVYYL 130
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS +I H DLKP N L+DR+ K +KI DFGLA ID E I G+ + APE +
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPEFVAPE-I 188
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ ++T+ LL+ +G ETL
Sbjct: 189 VNYEPLGLEADMWSIG-----VITYI----------LLSGASPFLGDTKQETLANVSAV- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
N + + L D +RR+L DP KR+T +++L+H + K
Sbjct: 233 -------NYEFEDEYFSNTSAL---AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 33/292 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGV-PSSVIREVSLLKELKHE 59
RY V+ +G +G V D +TG VK I + S++REV LLK+L H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI +L LV E L F + + + + + Q+L G+ Y H
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGEL-FDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 120 EILHRDLKPANFLID-RSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
+I+HRDLKP N L++ +SKD ++I DFGL+ + + K G+ Y APE L G+
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAYYIAPEVLHGT- 203
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y DVW+ +++ F+ +L +
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV----------------EKGKYTF 246
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
P + + A DL+R+ L PS R++AR+AL HE+ + +
Sbjct: 247 ELPQWKKVSESAK----------DLIRKXLTYVPSXRISARDALDHEWIQTY 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 121/289 (41%), Gaps = 36/289 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E + +G + V R L G I S + RE + + LKH NI
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
VRL + S L+F+ + L F + + QIL V +CH +
Sbjct: 73 VRLHDSISEEGHHYLIFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 131
Query: 122 LHRDLKPANFLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+HR+LKP N L+ VK+ADFGLA ++ + + G+ Y +PE +L Y
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE-VLRKDPY 190
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP---DSETLPXXXXXXXXX 236
PVD+WA G++ I ++G P D +
Sbjct: 191 GKPVDLWAC--------------------GVILYIL-LVGYPPFWDEDQHRLYQQIKAGA 229
Query: 237 XXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP D T P+ DL+ +ML ++PSKR+TA EAL+H +
Sbjct: 230 YDFP--SPEWDTVT------PEAKDLINKMLTINPSKRITAAEALKHPW 270
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 129/294 (43%), Gaps = 48/294 (16%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNP----SEGVPSSVIREVSLLKELK 57
Y L + + G +G V LTG V VK I+N S V + RE+ LK +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVK---ILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +I++L V S+ +V E + +L ++ V + ++ ++ QIL V YC
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE--MEARRLFQQILSAVDYC 127
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H ++HRDLKP N L+D + KIADFGL+ + E GS Y APE + S
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMN-AKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVI--S 183
Query: 177 GR-YSTP-VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAI-FSIMGTPDSETLPXXXXXX 233
GR Y+ P VD+W+ ++ F P L I + P+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----------- 232
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
NRS +AT LL ML +DP KR T ++ HE+FK
Sbjct: 233 -----YLNRS----VAT-----------LLMHMLQVDPLKRATIKDIREHEWFK 266
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y LL+ I +G + V A LTG V VK I + + REV + K L H NI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFEN------LDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
V+L V + ++ LV E D+ + H E + QI+ V Y
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-------RAKFRQIVSAVQY 128
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC----YKAPE 171
CH + I+HRDLK N L+D +I KIADFG + + K + C Y APE
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNI-KIADFGFSNEF-----TFGNKLDAFCGAPPYAAPE 182
Query: 172 RLLGSGRYSTP-VDVWAVACTFAEMVT 197
G +Y P VDVW++ +V+
Sbjct: 183 LFQGK-KYDGPEVDVWSLGVILYTLVS 208
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E + G +G VHR + TG+ K + M P E +V +E+ + L+H +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L + + + +++E + L + + + +Y+ Q+ G+ + H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 170
Query: 122 LHRDLKPAN--FLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS--G 177
+H DLKP N F RS ++ K+ DFGL +D P ++ + G+ + APE G G
Sbjct: 171 VHLDLKPENIMFTTKRSNEL-KLIDFGLTAHLD-PKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y+ D+W+V + LL+ + G D ETL
Sbjct: 229 YYT---DMWSVGVL---------------SYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ G+ DG D +R++L DP+ R+T +AL H +
Sbjct: 271 D-----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 37/289 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E + G +G VHR + TG+ K + M P E +V +E+ + L+H +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L + + + +++E + L + + + +Y+ Q+ G+ + H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY 276
Query: 122 LHRDLKPAN--FLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS--G 177
+H DLKP N F RS ++ K+ DFGL +D P ++ + G+ + APE G G
Sbjct: 277 VHLDLKPENIMFTTKRSNEL-KLIDFGLTAHLD-PKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y+ D+W+V + LL+ + G D ETL
Sbjct: 335 YYT---DMWSVGVL---------------SYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ G+ DG D +R++L DP+ R+T +AL H +
Sbjct: 377 D-----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 42/297 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y ++ + G YG V D +T +K I + S S ++ EV++LK L H NI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 62 VRLLNVQSSVDSIDLVFE-----NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
++L + + LV E L +++H MK N + + Q+L GV Y
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKF------NEVDAAVIIKQVLSGVTYL 152
Query: 117 HSQEILHRDLKPANFLID-RSKD-IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
H I+HRDLKP N L++ + KD ++KI DFGL+ + + + G+ Y APE L
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVL- 210
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
+Y DVW++ LF LLA G D E L
Sbjct: 211 -RKKYDEKCDVWSIGVI---------LFI------LLAGYPPFGGQTDQEIL-RKVEKGK 253
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
P + + A DL+++ML D +R++A++AL H + K+ S
Sbjct: 254 YTFDSPEWKNVSEGAK----------DLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 7 VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE-GVPSSVIREVSLLKELKHENIVRLL 65
++ +G + V+RA TG V +K I + G+ V EV + +LKH +I+ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 66 NVQSSVDSIDLVFENL-DFDLLHFMKTE-PTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
N + + LV E + ++ ++K ++N + + ++HQI+ G+ Y HS ILH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSEN--EARHFMHQIITGMLYLHSHGILH 135
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPV 183
RDL +N L+ R+ +I KIADFGLA + +P E + G+ Y +PE S +
Sbjct: 136 RDLTLSNLLLTRNMNI-KIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA-HGLES 193
Query: 184 DVWAVACTFAEMV 196
DVW++ C F ++
Sbjct: 194 DVWSLGCMFYTLL 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 39/223 (17%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR- 63
+ V+ +G +G V +A ++L +KKI +E S+++ EV LL L H+ +VR
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 64 ---------LLNVQSSVDSIDLVFENLDF-------DLLHFMKTEPTVTKNPLKIKKYLH 107
+ ++V +F ++ DL+H + + + +
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH----SENLNQQRDEYWRLFR 123
Query: 108 QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPL------------ 155
QIL ++Y HSQ I+HR+LKP N ID S++ VKI DFGLA+ + L
Sbjct: 124 QILEALSYIHSQGIIHRNLKPXNIFIDESRN-VKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 156 --ENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMV 196
+N T G+ Y A E L G+G Y+ +D +++ F E +
Sbjct: 183 SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 118/283 (41%), Gaps = 38/283 (13%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR-EVSLLKELKHENIVRLLNVQS 69
G +G VH + +G V+K I VP I E+ +LK L H NI+++ V
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTIN--KDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE 90
Query: 70 SVDSIDLVFENLDF-DLLHFMKTEPTVTK--NPLKIKKYLHQILHGVAYCHSQEILHRDL 126
++ +V E + +LL + + K + + + + Q+++ +AY HSQ ++H+DL
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150
Query: 127 KPANFLIDRSK--DIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVD 184
KP N L + +KI DFGLA E+ T G+ Y APE + D
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVFKRDVTFK--CD 207
Query: 185 VWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSP 244
+W+ LL GT E PN
Sbjct: 208 IWSAGVVMY---------------FLLTGCLPFTGTSLEEV------QQKATYKEPN--- 243
Query: 245 IKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
A L P VDLL++ML DP +R +A + L HE+FK
Sbjct: 244 ---YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 126/300 (42%), Gaps = 45/300 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDT---VVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
RY ++ + G YG V D LTG ++KK + S +++ EV++LK+L
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSN--SGALLDEVAVLKQLD 79
Query: 58 HENIVRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
H NI++L + LV E FD + + V + + Q+L G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI-----MKQVLSGT 134
Query: 114 AYCHSQEILHRDLKPANFLID-RSKD-IVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
Y H I+HRDLKP N L++ +S+D ++KI DFGL+ +V + G+ Y APE
Sbjct: 135 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERLGTAYYIAPE 193
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
L +Y DVW+ LL G D E L
Sbjct: 194 VL--RKKYDEKCDVWSCGVILYI---------------LLCGYPPFGGQTDQEILK-RVE 235
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
P+ + + D A L++ ML +PSKR++A EAL H + F S
Sbjct: 236 KGKFSFDPPDWTQVSDEAK----------QLVKLMLTYEPSKRISAEEALNHPWIVKFCS 285
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 17 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 73 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ YT + G+ + + APE + G
Sbjct: 131 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-AINYGT 186
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 12 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 68 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ YT + G+ + + APE + G
Sbjct: 126 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-AINYGT 181
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRI 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 23 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 79 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ YT + G+ + + APE + G
Sbjct: 137 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-AINYGT 192
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRI 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 22 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 78 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ YT + G+ + + APE + G
Sbjct: 136 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-AINYGT 191
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRI 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 27 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 83 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ YT + G+ + + APE + G
Sbjct: 141 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-AINYGT 196
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRI 219
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 126/300 (42%), Gaps = 45/300 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDT---VVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
RY ++ + G YG V D LTG ++KK + S +++ EV++LK+L
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSN--SGALLDEVAVLKQLD 62
Query: 58 HENIVRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
H NI++L + LV E FD + + V + + Q+L G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVI-----MKQVLSGT 117
Query: 114 AYCHSQEILHRDLKPANFLID-RSKD-IVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
Y H I+HRDLKP N L++ +S+D ++KI DFGL+ +V + G+ Y APE
Sbjct: 118 TYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERLGTAYYIAPE 176
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
L +Y DVW+ LL G D E L
Sbjct: 177 VL--RKKYDEKCDVWSCGVILYI---------------LLCGYPPFGGQTDQEILK-RVE 218
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQS 291
P+ + + D A L++ ML +PSKR++A EAL H + F S
Sbjct: 219 KGKFSFDPPDWTQVSDEAK----------QLVKLMLTYEPSKRISAEEALNHPWIVKFCS 268
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 124/294 (42%), Gaps = 46/294 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L E + +G + V R K I S + RE + + LKH NI
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + +HQIL V +
Sbjct: 93 VRLH------DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
H +I+HRDLKP N L+ + K VK+ADFGLA + + + G+ Y +PE +L
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE-VL 205
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP---DSETLPXXXX 231
Y PVD+WA G++ I ++G P D +
Sbjct: 206 RKDPYGKPVDIWAC--------------------GVILYIL-LVGYPPFWDEDQHKLYQQ 244
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP D T P+ +L+ +ML ++P+KR+TA +AL+H +
Sbjct: 245 IKAGAYDFP--SPEWDTVT------PEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +L I G YG + G +V K++ + +E ++ EV+LL+ELKH NI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 62 VRLLN--VQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVAYC 116
VR + + + ++ +V E + L + T+ T + L + + + Q+ + C
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 117 HSQE-----ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
H + +LHRDLKPAN +D K VK+ DFGLAR ++ G+ Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLD-GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPE 186
Query: 172 RLLGSGRYSTPVDVWAVACTFAEM 195
+ + Y+ D+W++ C E+
Sbjct: 187 Q-MNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVV---VKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + TG +KK + + GV I REV++L+E++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H NI+ L ++ + + L+ E + +L F+ + ++T++ + ++L QIL GV Y
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED--EATQFLKQILDGVHYL 124
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS+ I H DLKP N L+D++ +K+ DFG+A I+ E I G+ + APE +
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-FGTPEFVAPE-I 182
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F L I ++ D E
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF------- 235
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
S +LA D +RR+L DP +R+T ++L H + K
Sbjct: 236 ---------SNTSELAK----------DFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +L I G YG + G +V K++ + +E ++ EV+LL+ELKH NI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 62 VRLLN--VQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVAYC 116
VR + + + ++ +V E + L + T+ T + L + + + Q+ + C
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 117 HSQE-----ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
H + +LHRDLKPAN +D K VK+ DFGLAR ++ G+ Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLD-GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPE 186
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + Y+ D+W++ C E+
Sbjct: 187 Q-MNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 3/217 (1%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y L+ I EG +G + G V+K+I I S REV++L +KH N
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 61 IVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
IV+ S+ +V + + DL + + V +I + QI + + H +
Sbjct: 85 IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ILHRD+K N + + V++ DFG+AR ++ +E G+ Y +PE + + Y
Sbjct: 145 KILHRDIKSQNIFLTKD-GTVQLGDFGIARVLNSTVELARACIGTPYYLSPE-ICENKPY 202
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
+ D+WA+ C E+ T + F + L+ I S
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E + +G + V R TG K I S + RE + ++L+H NI
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + + QIL +AYC
Sbjct: 68 VRLH------DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
HS I+HR+LKP N L+ ++K VK+ADFGLA ++ E + G+ Y +PE +L
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE-VL 179
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
YS PVD+WA ++ F L A I + G D
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA--GAYDYP---------- 227
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALR 282
SP D T P+ L+ ML ++P KR+TA +AL+
Sbjct: 228 --------SPEWDTVT------PEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E + +G + V R TG K I S + RE + ++L+H NI
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + + QIL +AYC
Sbjct: 68 VRLH------DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
HS I+HR+LKP N L+ ++K VK+ADFGLA ++ E + G+ Y +PE +L
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE-VL 179
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
YS PVD+WA ++ F L A I + G D
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA--GAYDYP---------- 227
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALR 282
SP D T P+ L+ ML ++P KR+TA +AL+
Sbjct: 228 --------SPEWDTVT------PEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E + +G + V R TG K I S + RE + ++L+H NI
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLH----FMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ F + + QIL +AYC
Sbjct: 67 VRLH------DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
HS I+HR+LKP N L+ ++K VK+ADFGLA ++ E + G+ Y +PE +L
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE-VL 178
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
YS PVD+WA ++ F L A I + G D
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA--GAYDYP---------- 226
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALR 282
SP D T P+ L+ ML ++P KR+TA +AL+
Sbjct: 227 --------SPEWDTVT------PEAKSLIDSMLTVNPKKRITADQALK 260
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 127/288 (44%), Gaps = 41/288 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E + +G + V R TG K I S + RE + ++L+H NI
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 62 VRLLNVQSSVDSI-DLVFENLDFDLLHFMKT-EPTVTK---NPLKIKKYLHQILHGVAYC 116
VRL DSI + F L FDL+ + E V + + + QIL +AYC
Sbjct: 91 VRLH------DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 117 HSQEILHRDLKPANFLI-DRSKDI-VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
HS I+HR+LKP N L+ ++K VK+ADFGLA ++ E + G+ Y +PE +L
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPE-VL 202
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
YS PVD+WA ++ F L A I + G D
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA--GAYDYP---------- 250
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALR 282
SP D T P+ L+ ML ++P KR+TA +AL+
Sbjct: 251 --------SPEWDTVT------PEAKSLIDSMLTVNPKKRITADQALK 284
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 20/205 (9%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 19 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLH---QILHGVAYCHSQ 119
L V S + I +V E ++ LL F+K E T L++ + + QI G+AY
Sbjct: 75 LYAVVSE-EPIYIVTEYMNKGSLLDFLKGE---TGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L
Sbjct: 131 NYVHRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-Y 186
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRL 201
GR++ DVW+ E+ T R+
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 13 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 69 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HR+L+ AN L+ + KIADFGLAR I+ YT + G+ + + APE + G
Sbjct: 127 IHRNLRAANILVSDTLS-CKIADFGLARLIED--NEYTAREGAKFPIKWTAPE-AINYGT 182
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRI 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 12/206 (5%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +L I G YG + G +V K++ + +E ++ EV+LL+ELKH NI
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 62 VRLLN--VQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVAYC 116
VR + + + ++ +V E + L + T+ T + L + + + Q+ + C
Sbjct: 68 VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC 127
Query: 117 HSQE-----ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
H + +LHRDLKPAN +D K VK+ DFGLAR ++ + G+ Y +PE
Sbjct: 128 HRRSDGGHTVLHRDLKPANVFLD-GKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPE 186
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + Y+ D+W++ C E+
Sbjct: 187 Q-MNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L++ + G++G V + G+T V I + P P S + E ++K+LKH+ +V+
Sbjct: 13 LIKRLGNGQFGEVWMG--TWNGNTKVA--IKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMK-TEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V S + I +V E ++ LL F+K E K P + Q+ G+AY
Sbjct: 69 LYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLP-NLVDMAAQVAAGMAYIERMNY 126
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ I KIADFGLAR I+ T + G+ + + APE L GR
Sbjct: 127 IHRDLRSANILVGNGL-ICKIADFGLARLIED--NEXTARQGAKFPIKWTAPEAAL-YGR 182
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VT R+
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRV 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 15 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 71 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 130 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 185
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 186 TIKSDVWSFGILLTELTTKGRV 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 188 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 303 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 358
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRV 380
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+Y + E + G +G VHR ++ + T + K + + + + V +E+S+L +H N
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL---VKKEISILNIARHRN 62
Query: 61 IVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+ L S++ + ++FE + D+ + T N +I Y+HQ+ + + HS
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 120 EILHRDLKPANFLID-RSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
I H D++P N + R +KI +FG AR + P +N+ + + Y APE +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNFRLLFTAPEYYAPE-VHQHDV 179
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
ST D+W++ +++ F + ++ I + T D E
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKE---------- 229
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
+ + +D + R+L + R+TA EAL+H + K
Sbjct: 230 ----------------ISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLDFD-LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 188 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 303 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 358
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRV 380
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 188 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 244 LYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 303 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 358
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 359 TIKSDVWSFGILLTELTTKGRV 380
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+YT E I +G G V+ A D TG V ++++ + + +I E+ +++E K+ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 78
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L+ D + +V E L L + TE + + +I + L + + HS +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHSNQ 136
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
++HRD+K N L+ VK+ DFG I + G+ + APE ++ Y
Sbjct: 137 VIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKAYG 194
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
VD+W++ EM+ + + + P + + GTP+ +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQ---------------- 237
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
+P K L+ + D L R L +D KR +A+E L+H++ K
Sbjct: 238 --NPEK-LSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+YT E I +G G V+ A D TG V ++++ + + +I E+ +++E K+ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 78
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L+ D + +V E L L + TE + + +I + L + + HS +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHSNQ 136
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
++HRD+K N L+ VK+ DFG I + G+ + APE ++ Y
Sbjct: 137 VIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTRKAYG 194
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
VD+W++ EM+ + + + P + + GTP+ +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQ---------------- 237
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
+P K L+ + D L R L +D KR +A+E L+H++ K
Sbjct: 238 --NPEK-LSAIFR-------DFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 271 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 327 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 386 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 441
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 442 TIKSDVWSFGILLTELTTKGRV 463
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVV---VKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + TG +KK + + GV I REV++L+E++
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H NI+ L ++ + + L+ E + +L F+ + ++T++ + ++L QIL GV Y
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED--EATQFLKQILDGVHYL 145
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS+ I H DLKP N L+D++ +K+ DFG+A I+ E I G+ + APE +
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-FGTPEFVAPE-I 203
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F L I ++ D E
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF------- 256
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
S +LA D +RR+L DP +R+ ++L H + K
Sbjct: 257 ---------SNTSELAK----------DFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 13 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 69 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 128 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 183
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 184 TIKSDVWSFGILLTELTTKGRV 205
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 11 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 67 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 126 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 181
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 182 TIKSDVWSFGILLTELTTKGRV 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 20/205 (9%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 19 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLH---QILHGVAYCHSQ 119
L V S + I +V E ++ LL F+K E T L++ + + QI G+AY
Sbjct: 75 LYAVVSE-EPIYIVTEYMNKGSLLDFLKGE---TGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+HRDL+ AN L+ + + K+ADFGLAR I+ +T + G+ + + APE L
Sbjct: 131 NYVHRDLRAANILVGENL-VCKVADFGLARLIED--NEWTARQGAKFPIKWTAPEAAL-Y 186
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRL 201
GR++ DVW+ E+ T R+
Sbjct: 187 GRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVV---VKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + TG +KK + + GV I REV++L+E++
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H NI+ L ++ + + L+ E + +L F+ + ++T++ + ++L QIL GV Y
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED--EATQFLKQILDGVHYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRS--KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
HS+ I H DLKP N L+D++ +K+ DFG+A I+ E I G+ + APE +
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F L I ++ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
S +LA D +RR+L DP +R+ ++L H + K
Sbjct: 243 ---------SNTSELAK----------DFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V +K K I + E P+ +V E+ +LK+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 188
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 189 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 228
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 229 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 18 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 74 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 131
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 132 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 187
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRI 210
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 17 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 73 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 131 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 186
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLDFD-LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V +K K I + E P+ +V E+ +LK+
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 78 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 194
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 195 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 234
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 235 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 19 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 75 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 132
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 133 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 188
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRI 211
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 130/324 (40%), Gaps = 44/324 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY +++ + EG +G V D G V + I+ + + E+ +L+ L +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVA--VKIVKNVDRYCEAARSEIQVLEHLNTTD 72
Query: 61 ------IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
V++L I +VFE L F+K + I+K +QI V
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 115 YCHSQEILHRDLKPANFLIDRSKDI------------------VKIADFGLARPIDVPLE 156
+ HS ++ H DLKP N L +S +K+ DFG A D E
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD---E 189
Query: 157 NYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
+++ + Y+APE +L G +S P DVW++ C E +F + + LA +
Sbjct: 190 HHSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 217 IMG--------------TPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDL 262
I+G + L P+K+ DL
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 263 LRRMLCLDPSKRLTAREALRHEYF 286
+++ML DP+KR+T REAL+H +F
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFF 332
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V +K K I + E P+ +V E+ +LK+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 188
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 189 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 228
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 229 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V +K K I + E P+ +V E+ +LK+
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 71 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 187
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 188 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 227
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 228 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 26 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 82 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 139
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 140 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 195
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRI 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V +K K I + E P+ +V E+ +LK+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 188
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 189 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 228
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 229 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 121/287 (42%), Gaps = 34/287 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ E + G + V A + TG VK IP +G SS+ E+++L+++KHENI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIP-KKALKGKESSIENEIAVLRKIKHENI 82
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L ++ S + + LV + + L F + + Q+L V Y H I
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGEL-FDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 122 LHRDLKPANFLI---DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+HRDLKP N L D I+ I+DFGL++ ++ + + G+ Y APE +L
Sbjct: 142 VHRDLKPENLLYYSQDEESKIM-ISDFGLSK-MEGKGDVMSTACGTPGYVAPE-VLAQKP 198
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
YS VD W++ ++ F+ L I DS
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS--------------- 243
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P I D A D +R ++ DP+KR T +A RH +
Sbjct: 244 -PYWDDISDSAK----------DFIRNLMEKDPNKRYTCEQAARHPW 279
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 17 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 73 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 131 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 186
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRI 209
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 23 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 79 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 137 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 192
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRI 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+YT E I +G G V+ A D TG V ++++ + + +I E+ +++E K+ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 79
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L+ D + +V E L L + TE + + +I + L + + HS +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHSNQ 137
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
++HRD+K N L+ VK+ DFG I + G+ + APE ++ Y
Sbjct: 138 VIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTRKAYG 195
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
VD+W++ EM+ + + + P + + GTP+ +
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQ---------------- 238
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
+P K L+ + D L R L +D KR +A+E ++H++ K
Sbjct: 239 --NPEK-LSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G++G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 25 LVERLGAGQFGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 81 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 139 IHRDLRAANILVSDTLS-CKIADFGLARLIED--NEXTAREGAKFPIKWTAPE-AINYGT 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRI 217
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+++HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+YT E I +G G V+ A D TG V ++++ + + +I E+ +++E K+ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 78
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L+ D + +V E L L + TE + + +I + L + + HS +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHSNQ 136
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
++HRD+K N L+ VK+ DFG I + G+ + APE ++ Y
Sbjct: 137 VIHRDIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE-VVTRKAYG 194
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
VD+W++ EM+ + + + P + + GTP+ +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQ---------------- 237
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
+P K L+ + D L R L +D KR +A+E L+H++ K
Sbjct: 238 --NPEK-LSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V ++ K I + E P+ +V E+ +LK+
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 197 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 313
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 314 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 353
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 354 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 118/288 (40%), Gaps = 32/288 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L++ I G +G D + + V VK I E + ++V RE+ + L+H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIAANVKREIINHRSLRHPN 76
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVR V + + +V E L F + + + + + Q++ GV+YCH+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 121 ILHRDLKPANFLIDRS-KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ HRDLK N L+D S +KI DFG ++ V G+ Y APE LL
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAP-GLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
DVW+ T M+ F P I I+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV------------------ 236
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ I D + P+ L+ R+ DP+KR++ E HE+F
Sbjct: 237 ---QYAIPDYVHI----SPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL AN L+ + + K+ADFGLAR I+ YT + G+ + + APE L GR+
Sbjct: 137 HRDLAAANILVGENL-VCKVADFGLARLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 11/212 (5%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM-NPSEGVPSSVIREVSLLKELKHE 59
RY +++ + G V+ A D++ V +K I I E REV +L H+
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYC 116
NIV +++V D LV E ++ L +E + PL + + +QIL G+ +
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTL----SEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERLLG 175
H I+HRD+KP N LID +K +KI DFG+A+ + + L G++ Y +PE+ G
Sbjct: 128 HDMRIVHRDIKPQNILIDSNK-TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQRLFHSRWA 207
D++++ EM+ + F+ A
Sbjct: 187 EAT-DECTDIYSIGIVLYEMLVGEPPFNGETA 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 127/297 (42%), Gaps = 38/297 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK-----KIPIMNPSEGVPS-SVIREVSLLKE 55
Y + + + G G V A + T V ++ K I + E P+ +V E+ +LK+
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
L H I+++ N + D +V E ++ L F K K Y +Q+L V Y
Sbjct: 211 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 116 CHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H I+HRDLKP N L+ ++ ++KI DFG ++ + T+ G+ Y APE L
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-CGTPTYLAPEVL 327
Query: 174 --LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
+G+ Y+ VD W++ G++ I P SE
Sbjct: 328 VSVGTAGYNRAVDCWSL--------------------GVILFICLSGYPPFSEHRTQVSL 367
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKD 288
N P V + +DL++++L +DP R T EALRH + +D
Sbjct: 368 KDQITSGKYNFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 189 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 245 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGL R I+ YT + G+ + + APE L GR+
Sbjct: 304 HRDLRAANILVGENL-VCKVADFGLGRLIED--NEYTARQGAKFPIKWTAPEAAL-YGRF 359
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 360 TIKSDVWSFGILLTELTTKGRV 381
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNP-SEGVPSSVIREVSLLKELKHEN 60
++ L I G +GAV+ A D + V +KK+ S +I+EV L++L+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 61 IVRLLNVQSSVDSIDLVFE---NLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVA 114
++ + LV E DLL V K PL+ I H L G+A
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLE-------VHKKPLQEVEIAAVTHGALQGLA 168
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS ++HRD+K N L+ +VK+ DFG A I P + G+ + APE +L
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEP-GLVKLGDFGSAS-IMAPANXFV---GTPYWMAPEVIL 223
Query: 175 G--SGRYSTPVDVWAVACTFAEMV 196
G+Y VDVW++ T E+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELA 247
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 116/287 (40%), Gaps = 31/287 (10%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +LE + G +G VHR + TG V K I P + +V E+S++ +L H +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHHPKL 110
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+ L + + L+ E L L + ++ Y+ Q G+ + H I
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI 170
Query: 122 LHRDLKPANFLIDRSK-DIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+H D+KP N + + K VKI DFGLA ++ P E + + + APE ++
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPE-IVDREPVG 228
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
D+WA+ LL+ + G D ETL
Sbjct: 229 FYTDMWAIGVL---------------GYVLLSGLSPFAGEDDLETLQNV----------- 262
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
R + + P+ D ++ +L +P KRLT +AL H + K
Sbjct: 263 KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 13/229 (5%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L++ + G++G V + + V VK + P + + E +L+K L+H+ +VR
Sbjct: 17 LVKRLGAGQFGEVWMGYYN-NSTKVAVK---TLKPGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 64 LLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V + + I ++ E + LL F+K++ K+ + QI G+AY + +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 132
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ S + KIADFGLAR I+ YT + G+ + + APE + G +
Sbjct: 133 HRDLRAANVLVSESL-MCKIADFGLARVIED--NEYTAREGAKFPIKWTAPE-AINFGCF 188
Query: 180 STPVDVWAVACTFAEMVTHQRL-FHSRWAPGLLAAIFSIMGTPDSETLP 227
+ DVW+ E+VT+ ++ + R ++ A+ P E P
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCP 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 1 RYTLLEVIREGRYGAVHRAHDS--LTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH 58
+Y + +++ EG YG V DS L V + K + ++V +E+ LL+ L+H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 59 ENIVRLLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
+N+++L++V + +V E + + + P + Y Q++ G+ Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYL 125
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPERLL 174
HSQ I+H+D+KP N L+ + +KI+ G+A + + T + GS ++ PE
Sbjct: 126 HSQGIVHKDIKPGNLLL-TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN 184
Query: 175 GSGRYST-PVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
G +S VD+W+ T + T F + +F +G
Sbjct: 185 GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD----NIYKLFENIG-------------- 226
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
K + G P DLL+ ML +P+KR + R+ +H +F+
Sbjct: 227 ------------KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 129/324 (39%), Gaps = 44/324 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY +++ + EG +G V D G V + I+ + + E+ +L+ L +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVA--VKIVKNVDRYCEAARSEIQVLEHLNTTD 72
Query: 61 ------IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
V++L I +VFE L F+K + I+K +QI V
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 115 YCHSQEILHRDLKPANFLIDRSKDI------------------VKIADFGLARPIDVPLE 156
+ HS ++ H DLKP N L +S +K+ DFG A D E
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD---E 189
Query: 157 NYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
+++ Y+APE +L G +S P DVW++ C E +F + + LA +
Sbjct: 190 HHSTLVXXRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 217 IMG--------------TPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDL 262
I+G + L P+K+ DL
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 263 LRRMLCLDPSKRLTAREALRHEYF 286
+++ML DP+KR+T REAL+H +F
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFF 332
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + + TG +KK GV I REVS+L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L +V + + L+ E + +L F+ + ++++ + ++ QIL GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILDGVNYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H+++I H DLKP N L+D++ I +K+ DFGLA I+ +E I G+ + APE +
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F LA I S+ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
S +LA D +R++L + KRLT +EALRH +
Sbjct: 243 ---------SHTSELAK----------DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +V+ G + V A D T V +K I EG S+ E+++L ++KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L ++ S + L+ + + L F + + + Q+L V Y H I
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGEL-FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 122 LHRDLKPANFL---IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+HRDLKP N L +D I+ I+DFGL++ D P + G+ Y APE +L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED-PGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
YS VD W++ ++ F+ L I DS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS--------------- 239
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
P I D A D +R ++ DP KR T +AL+H + +LD
Sbjct: 240 -PYWDDISDSAK----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +V+ G + V A D T V +K I EG S+ E+++L ++KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L ++ S + L+ + + L F + + + Q+L V Y H I
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGEL-FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 122 LHRDLKPANFL---IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+HRDLKP N L +D I+ I+DFGL++ D P + G+ Y APE +L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED-PGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
YS VD W++ ++ F+ L I DS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS--------------- 239
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
P I D A D +R ++ DP KR T +AL+H + +LD
Sbjct: 240 -PYWDDISDSAK----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNP-SEGVPSSVIREVSLLKELKHEN 60
++ L I G +GAV+ A D + V +KK+ S +I+EV L++L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 61 IVRLLNVQSSVDSIDLVFE---NLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVA 114
++ + LV E DLL V K PL+ I H L G+A
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLE-------VHKKPLQEVEIAAVTHGALQGLA 129
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS ++HRD+K N L+ +VK+ DFG A I P + G+ + APE +L
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEP-GLVKLGDFGSA-SIMAPANXFV---GTPYWMAPEVIL 184
Query: 175 G--SGRYSTPVDVWAVACTFAEMV 196
G+Y VDVW++ T E+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELA 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 72
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HR+L N L++ +++ VKI DFGL + + E Y +K G S + + APE L
Sbjct: 133 TKRYIHRNLATRNILVE-NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 192 ES-KFSVASDVWSFGVVLYELFTY 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 38/290 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + + TG +KK GV I REVS+L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L +V + + L+ E + +L F+ + ++++ + ++ QIL GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILDGVNYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H+++I H DLKP N L+D++ I +K+ DFGLA I+ +E I G+ + APE +
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F LA I S+ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
S +LA D +R++L + KRLT +EALRH
Sbjct: 243 ---------SHTSELAK----------DFIRKLLVKETRKRLTIQEALRH 273
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +V+ G + V A D T V +K I EG S+ E+++L ++KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L ++ S + L+ + + L F + + + Q+L V Y H I
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGEL-FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 122 LHRDLKPANFL---IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+HRDLKP N L +D I+ I+DFGL++ D P + G+ Y APE +L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED-PGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
YS VD W++ ++ F+ L I DS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS--------------- 239
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
P I D A D +R ++ DP KR T +AL+H + +LD
Sbjct: 240 -PYWDDISDSAK----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 121/295 (41%), Gaps = 34/295 (11%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y +V+ G + V A D T V +K I EG S+ E+++L ++KH NI
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
V L ++ S + L+ + + L F + + + Q+L V Y H I
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGEL-FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 122 LHRDLKPANFL---IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+HRDLKP N L +D I+ I+DFGL++ D P + G+ Y APE +L
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIM-ISDFGLSKMED-PGSVLSTACGTPGYVAPE-VLAQKP 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
YS VD W++ ++ F+ L I DS
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS--------------- 239
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSLD 293
P I D A D +R ++ DP KR T +AL+H + +LD
Sbjct: 240 -PYWDDISDSAK----------DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALD 283
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 117/288 (40%), Gaps = 32/288 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L++ I G +G D + + V VK I E + +V RE+ + L+H N
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSLRHPN 75
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVR V + + +V E L F + + + + + Q++ GV+YCH+ +
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 121 ILHRDLKPANFLIDRS-KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ HRDLK N L+D S +KI DFG ++ V G+ Y APE LL
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAP-GLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
DVW+ T M+ F P I I+
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV------------------ 235
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ I D + P+ L+ R+ DP+KR++ E HE+F
Sbjct: 236 ---QYAIPDYVHI----SPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 116/291 (39%), Gaps = 40/291 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YTL I G +G V A T KKIP + +E+ ++K L H NI
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPNI 85
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVAYCHS 118
+RL I LV E L E V K + + + +L VAYCH
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELF----ERVVHKRVFRESDAARIMKDVLSAVAYCHK 141
Query: 119 QEILHRDLKPANFLI--DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
+ HRDLKP NFL D +K+ DFGLA P + K G+ Y +P+ L G
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPYYVSPQVLEG- 199
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXX 236
++ C W+ G++ + + G P + P
Sbjct: 200 --------LYGPEC-------------DEWSAGVMMYVL-LCGYPPF-SAPTDXEVMLKI 236
Query: 237 XXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
P KD V P L+RR+L P +R+T+ +AL HE+F+
Sbjct: 237 REGTFTFPEKDWLNV----SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 12 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 68 LYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ T + G+ + + APE L GR+
Sbjct: 127 HRDLRAANILVGENL-VCKVADFGLARLIED--NEXTARQGAKFPIKWTAPEAAL-YGRF 182
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 183 TIKSDVWSFGILLTELTTKGRV 204
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + + TG +KK GV I REVS+L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L +V + + L+ E + +L F+ + ++++ + ++ QIL GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILDGVNYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H+++I H DLKP N L+D++ I +K+ DFGLA I+ +E I G+ + APE +
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F LA I S+ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
S +LA D +R++L + KRLT +EALRH +
Sbjct: 243 ---------SHTSELAK----------DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 5 LEV-IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LEV + +G +G V + G T V I + P P + ++E ++K+L+HE +V+
Sbjct: 22 LEVKLGQGCFGEVWMG--TWNGTTRVA--IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 64 LLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V S + I +V E + LL F+K E ++ QI G+AY +
Sbjct: 78 LYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ + + K+ADFGLAR I+ T + G+ + + APE L GR+
Sbjct: 137 HRDLRAANILVGENL-VCKVADFGLARLIED--NEXTARQGAKFPIKWTAPEAAL-YGRF 192
Query: 180 STPVDVWAVACTFAEMVTHQRL 201
+ DVW+ E+ T R+
Sbjct: 193 TIKSDVWSFGILLTELTTKGRV 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 71
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E + +K G S + + APE L
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 191 ES-KFSVASDVWSFGVVLYELFTY 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
+YT E I +G G V+ A D TG V ++++ + + +I E+ +++E K+ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPN 79
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IV L+ D + +V E L L + TE + + +I + L + + HS +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHSNQ 137
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
++HR++K N L+ VK+ DFG I + G+ + APE ++ Y
Sbjct: 138 VIHRNIKSDNILLGMDGS-VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKAYG 195
Query: 181 TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXP 240
VD+W++ EM+ + + + P + + GTP+ +
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQ---------------- 238
Query: 241 NRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
+P K L+ + D L R L +D KR +A+E ++H++ K
Sbjct: 239 --NPEK-LSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L++ + G++G V + + V VK + P + + E +L+K L+H+ +VR
Sbjct: 16 LVKKLGAGQFGEVWMGYYN-NSTKVAVK---TLKPGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 64 LLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
L V + + I ++ E + LL F+K++ K+ + QI G+AY + +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRY 179
HRDL+ AN L+ S + KIADFGLAR I+ YT + G+ + + APE + G +
Sbjct: 132 HRDLRAANVLVSESL-MCKIADFGLARVIED--NEYTAREGAKFPIKWTAPEA-INFGCF 187
Query: 180 STPVDVWAVACTFAEMVTHQRL-FHSRWAPGLLAAIFSIMGTPDSETLP 227
+ +VW+ E+VT+ ++ + R +++A+ P E P
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCP 236
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 10 EGRYGAVHRAHD---SLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
EG +G V A S T D ++V + +P+ RE LL L+HE+IV+
Sbjct: 25 EGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYG 84
Query: 67 VQSSVDSIDLVFENLDF-DLLHFMKT-----------EPTVTKNPLKIKKYLH---QILH 111
V D + +VFE + DL F++ +P K L + + LH QI
Sbjct: 85 VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIAS 144
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS----LCY 167
G+ Y SQ +HRDL N L+ + +VKI DFG++R DV +Y GG + +
Sbjct: 145 GMVYLASQHFVHRDLATRNCLVG-ANLLVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRW 201
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTHQR 200
PE ++ +++T DVW+ E+ T+ +
Sbjct: 202 MPPESIMYR-KFTTESDVWSFGVILWEIFTYGK 233
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
EV+ G +G V +A V +K+I SE + I E+ L + H NIV+L
Sbjct: 14 EVVGRGAFGVVCKA--KWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 66 NVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE- 120
+ ++ + LV E + +++LH EP + Q GVAY HS +
Sbjct: 68 G--ACLNPVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 121 --ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
++HRDLKP N L+ ++KI DFG A I + N GS + APE GS
Sbjct: 124 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGS-N 179
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP 227
YS DV++ E++T ++ F P F IM + T P
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPA-----FRIMWAVHNGTRP 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 116/291 (39%), Gaps = 40/291 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
YTL I G +G V A T KKIP + +E+ ++K L H NI
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPNI 68
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK---IKKYLHQILHGVAYCHS 118
+RL I LV E L E V K + + + +L VAYCH
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELF----ERVVHKRVFRESDAARIMKDVLSAVAYCHK 124
Query: 119 QEILHRDLKPANFLI--DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
+ HRDLKP NFL D +K+ DFGLA P + K G+ Y +P+ L G
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKVGTPYYVSPQVLEG- 182
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXX 236
++ C W+ G++ + + G P + P
Sbjct: 183 --------LYGPEC-------------DEWSAGVMMYVL-LCGYPPF-SAPTDXEVMLKI 219
Query: 237 XXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
P KD V P L+RR+L P +R+T+ +AL HE+F+
Sbjct: 220 REGTFTFPEKDWLNV----SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 133/290 (45%), Gaps = 38/290 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + + TG +KK GV I REVS+L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L +V + + L+ E + +L F+ + ++++ + ++ QIL GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILDGVNYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H+++I H DLKP N L+D++ I +K+ DFGLA I+ +E I G+ + APE +
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F LA I ++ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRH 283
S +LA D +R++L + KRLT +EALRH
Sbjct: 243 ---------SQTSELAK----------DFIRKLLVKETRKRLTIQEALRH 273
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
L+E + G+ G V + G T V K + P + + E +L+K+L+H+ +VR
Sbjct: 17 LVERLGAGQAGEVWMGY--YNGHTKVAVKS--LKQGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L V Q + I EN L+ F+KT + K+ QI G+A+ +
Sbjct: 73 LYAVVTQEPIYIITEYMEN--GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL+ AN L+ + KIADFGLAR I+ T + G+ + + APE + G
Sbjct: 131 IHRDLRAANILVSDTLS-CKIADFGLARLIEDA--EXTAREGAKFPIKWTAPE-AINYGT 186
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
++ DVW+ E+VTH R+
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRI 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
EV+ G +G V +A V +K+I SE + I E+ L + H NIV+L
Sbjct: 15 EVVGRGAFGVVCKA--KWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 66 NVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE- 120
+ ++ + LV E + +++LH EP + Q GVAY HS +
Sbjct: 69 G--ACLNPVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 121 --ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
++HRDLKP N L+ ++KI DFG A I + N GS + APE GS
Sbjct: 125 KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAWMAPEVFEGS-N 180
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLP 227
YS DV++ E++T ++ F P F IM + T P
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPA-----FRIMWAVHNGTRP 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + + TG +KK GV I REVS+L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H N++ L +V + + L+ E + +L F+ + ++++ + ++ QIL GV Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILDGVNYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H+++I H DLKP N L+D++ I +K+ DFGLA I+ +E I G+ + APE +
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F LA I ++ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
S +LA D +R++L + KRLT +EALRH +
Sbjct: 243 ---------SQTSELAK----------DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 102
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 163 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 222 ES-KFSVASDVWSFGVVLYELFTY 244
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 76
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 137 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 196 ES-KFSVASDVWSFGVVLYELFTY 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 77
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 138 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 197 ES-KFSVASDVWSFGVVLYELFTY 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 78
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 139 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 198 ES-KFSVASDVWSFGVVLYELFTY 220
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 75
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 136 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 195 ES-KFSVASDVWSFGVVLYELFTY 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 89
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 150 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 209 ES-KFSVASDVWSFGVVLYELFTY 231
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 89
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 150 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 209 ES-KFSVASDVWSFGVVLYELFTY 231
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 69
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 130 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 189 ES-KFSVASDVWSFGVVLYELFTY 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 74
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 135 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 194 ES-KFSVASDVWSFGVVLYELFTY 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 71
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 191 ES-KFSVASDVWSFGVVLYELFTY 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 71
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 132 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 191 ES-KFSVASDVWSFGVVLYELFTY 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 70
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 131 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 190 ES-KFSVASDVWSFGVVLYELFTY 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G++G V A + T V K M P + + E +++K L+H+ +V+L V +
Sbjct: 26 GQFGEVWMA--TYNKHTKVAVKT--MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 71 VDSIDLVFENL-DFDLLHFMKTEPTVTKNPL-KIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ I ++ E + LL F+K++ +K PL K+ + QI G+A+ + +HRDL+
Sbjct: 82 -EPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVDV 185
AN L+ S + KIADFGLAR I+ YT + G+ + + APE + G ++ DV
Sbjct: 140 ANILVSASL-VCKIADFGLARVIED--NEYTAREGAKFPIKWTAPE-AINFGSFTIKSDV 195
Query: 186 WAVACTFAEMVTHQRL 201
W+ E+VT+ R+
Sbjct: 196 WSFGILLMEIVTYGRI 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L+ + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 74
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + +K+ +Y QI G+ Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 135 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 194 ES-KFSVASDVWSFGVVLYELFTY 216
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTG---DTVVVKKIPIMNPSEGVPSSVI-REVSLLKELK 57
Y + E + G++ V + + TG +KK GV I REVS+L+++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H NI+ L +V + + L+ E + +L F+ + ++++ + ++ QIL GV Y
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILDGVNYL 131
Query: 117 HSQEILHRDLKPAN-FLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
H+++I H DLKP N L+D++ I +K+ DFGLA I+ +E I G+ + APE +
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI-FGTPEFVAPE-I 189
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ D+W++ +++ F LA I ++ D E
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFF------- 242
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
S +LA D +R++L + KRLT +EALRH +
Sbjct: 243 ---------SQTSELAK----------DFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G++G V A + T V + M P + + E +++K L+H+ +V+L V +
Sbjct: 199 GQFGEVWMA--TYNKHTKVA--VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 71 VDSIDLVFENL-DFDLLHFMKTEPTVTKNPL-KIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ I ++ E + LL F+K++ +K PL K+ + QI G+A+ + +HRDL+
Sbjct: 255 -EPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 312
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVDV 185
AN L+ S + KIADFGLAR I+ YT + G+ + + APE + G ++ DV
Sbjct: 313 ANILVSASL-VCKIADFGLARVIED--NEYTAREGAKFPIKWTAPE-AINFGSFTIKSDV 368
Query: 186 WAVACTFAEMVTHQRL 201
W+ E+VT+ R+
Sbjct: 369 WSFGILLMEIVTYGRI 384
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 46/284 (16%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIP---IMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
+G + D+ T + K +P ++ P + S+ E+S+ + L H+++V
Sbjct: 25 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVV---G 79
Query: 67 VQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ D VF L+ LL K +T+ + + YL QI+ G Y H ++
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNRVI 137
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N ++ + VKI DFGLA ++ E + G+ Y APE L G +S
Sbjct: 138 HRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFE 195
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNR 242
VDVW++ C + ++G P ET
Sbjct: 196 VDVWSIGCIMYTL---------------------LVGKPPFETSCLKETYLRIK------ 228
Query: 243 SPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
K+ ++ + P L+++ML DP+ R T E L E+F
Sbjct: 229 ---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPIMNPSEGVP--SSVIREVSLLKELKHENIVR 63
EG +G V + TG+ V VK + P G + + +E+ +L+ L HENIV+
Sbjct: 19 EGHFGKVELCRYDPEGDNTGEQVAVKS---LKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYCHS 118
+ + + I L+ E L L K KN + +K KY QI G+ Y S
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSL---KEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK---GGSLCYKAPERLLG 175
++ +HRDL N L++ S+ VKI DFGL + I+ E T+K + + APE L+
Sbjct: 133 RQYVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 176 SGRYSTPVDVWAVACTFAEMVTH 198
S ++ DVW+ T E++T+
Sbjct: 192 S-KFYIASDVWSFGVTLHELLTY 213
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPIMNPSEGVP--SSVIREVSLLKELKHENIVR 63
EG +G V + TG+ V VK + P G + + +E+ +L+ L HENIV+
Sbjct: 31 EGHFGKVELCRYDPEGDNTGEQVAVKS---LKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 64 LLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYCHS 118
+ + + I L+ E L L K KN + +K KY QI G+ Y S
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSL---KEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK---GGSLCYKAPERLLG 175
++ +HRDL N L++ S+ VKI DFGL + I+ E T+K + + APE L+
Sbjct: 145 RQYVHRDLAARNVLVE-SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 176 SGRYSTPVDVWAVACTFAEMVTH 198
S ++ DVW+ T E++T+
Sbjct: 204 S-KFYIASDVWSFGVTLHELLTY 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
L + +G +G+V +D L TG+ V VKK+ + +E RE+ +LK L+H+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHD 74
Query: 60 NIVRLLNVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
NIV+ V S ++ L+ E L + L + + +K+ +Y QI G+ Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLL 174
++ +HRDL N L++ +++ VKI DFGL + + E +K G S + + APE L
Sbjct: 135 TKRYIHRDLATRNILVE-NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
S ++S DVW+ E+ T+
Sbjct: 194 ES-KFSVASDVWSFGVVLYELFTY 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 46/284 (16%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIP---IMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
+G + D+ T + K +P ++ P + S+ E+S+ + L H+++V
Sbjct: 49 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVV---G 103
Query: 67 VQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ D VF L+ LL K +T+ + + YL QI+ G Y H ++
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNRVI 161
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N ++ + VKI DFGLA ++ E + G+ Y APE L G +S
Sbjct: 162 HRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFE 219
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNR 242
VDVW++ C + ++G P ET
Sbjct: 220 VDVWSIGCIMYTL---------------------LVGKPPFETSCLKETYLRIK------ 252
Query: 243 SPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
K+ ++ + P L+++ML DP+ R T E L E+F
Sbjct: 253 ---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 46/284 (16%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIP---IMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
+G + D+ T + K +P ++ P + S+ E+S+ + L H+++V
Sbjct: 51 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVV---G 105
Query: 67 VQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ D VF L+ LL K +T+ + + YL QI+ G Y H ++
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNRVI 163
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N ++ + VKI DFGLA ++ E + G+ Y APE L G +S
Sbjct: 164 HRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG-HSFE 221
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNR 242
VDVW++ C + ++G P ET
Sbjct: 222 VDVWSIGCIMYTL---------------------LVGKPPFETSCLKETYLRIK------ 254
Query: 243 SPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
K+ ++ + P L+++ML DP+ R T E L E+F
Sbjct: 255 ---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L++ I G +G D + + V VK I E + +V RE+ + L+H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSLRHPN 76
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVR V + + +V E L F + + + + + Q++ GV+YCH+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 121 ILHRDLKPANFLIDRS-KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ HRDLK N L+D S +KI FG ++ V G+ Y APE LL
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAP-GLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
DVW+ T M+ F P I I+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV------------------ 236
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ I D + P+ L+ R+ DP+KR++ E HE+F
Sbjct: 237 ---QYAIPDYVHI----SPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 36 MNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSSVDSIDLV-----FENLDF------- 83
M+ E V+ + LLK + E + + + S+D+ +V FE+ DF
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 84 ----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI 139
LL K VT+ + + ++ Q + GV Y H+ ++HRDLK N ++ D
Sbjct: 124 CRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 180
Query: 140 VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQ 199
VKI DFGLA I+ E G+ Y APE L G +S VD+W++ C +
Sbjct: 181 VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTL---- 235
Query: 200 RLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDG 259
++G P ET K+ +V + P
Sbjct: 236 -----------------LVGKPPFETSCLKETYIRIK---------KNEYSVPRHINPVA 269
Query: 260 VDLLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP+ R + E L E+F
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L++ I G +G D + + V VK I E + +V RE+ + L+H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYI---ERGEKIDENVKREIINHRSLRHPN 76
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVR V + + +V E L F + + + + + Q++ GV+YCH+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 121 ILHRDLKPANFLIDRS-KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ HRDLK N L+D S +KI FG ++ V G+ Y APE LL
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKS-SVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAP-GLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
DVW+ T M+ F P I I+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV------------------ 236
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ I D + P+ L+ R+ DP+KR++ E HE+F
Sbjct: 237 ---QYAIPDYVHI----SPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 116/288 (40%), Gaps = 32/288 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY L++ I G +G D + V VK I E + +V RE+ + L+H N
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYI---ERGEKIDENVKREIINHRSLRHPN 76
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
IVR V + + +V E L F + + + + + Q++ GV+Y H+ +
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 121 ILHRDLKPANFLIDRS-KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ HRDLK N L+D S +KIADFG ++ V G+ Y APE LL
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKA-SVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAP-GLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
DVW+ T M+ F P I I+
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV------------------ 236
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+ I D + P+ L+ R+ DP+KR++ E HE+F
Sbjct: 237 ---QYAIPDYVHI----SPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 36 MNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSSVDSIDLV-----FENLDF------- 83
M+ E V+ + LLK + E + + + S+D+ +V FE+ DF
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 84 ----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI 139
LL K VT+ + + ++ Q + GV Y H+ ++HRDLK N ++ D
Sbjct: 124 CRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 180
Query: 140 VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQ 199
VKI DFGLA I+ E G+ Y APE L G +S VD+W++ C +
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTL---- 235
Query: 200 RLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDG 259
++G P ET K+ +V + P
Sbjct: 236 -----------------LVGKPPFETSCLKETYIRIK---------KNEYSVPRHINPVA 269
Query: 260 VDLLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP+ R + E L E+F
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E+I G +G V +A + G T V++++ N REV L +L H NI
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEK------AEREVKALAKLDHVNI 67
Query: 62 VRLLNVQSSVD----SIDLVFENLDFDLLHFMKTEPTVTK-------------------- 97
V D + D E+ D+D + + + TK
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 98 -NPLKIKKYL-----HQILHGVAYCHSQEILHRDLKPAN-FLIDRSKDIVKIADFGLARP 150
K+ K L QI GV Y HS++++HRDLKP+N FL+D + VKI DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ--VKIGDFGLVTS 185
Query: 151 IDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMV 196
+ + T G+L Y +PE+ + S Y VD++A+ AE++
Sbjct: 186 LKNDGKR-TRSKGTLRYMSPEQ-ISSQDYGKEVDLYALGLILAELL 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIP---IMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
+G + D+ T + K +P ++ P + S+ E+S+ + L H+++V
Sbjct: 31 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVV---G 85
Query: 67 VQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ D VF L+ LL K +T+ + + YL QI+ G Y H ++
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNRVI 143
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N ++ + VKI DFGLA ++ E G+ Y APE L G +S
Sbjct: 144 HRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFE 201
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNR 242
VDVW++ C + ++G P ET
Sbjct: 202 VDVWSIGCIMYTL---------------------LVGKPPFETSCLKETYLRIK------ 234
Query: 243 SPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
K+ ++ + P L+++ML DP+ R T E L E+F
Sbjct: 235 ---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIP---IMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
+G + D+ T + K +P ++ P + S+ E+S+ + L H+++V
Sbjct: 27 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVV---G 81
Query: 67 VQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ D VF L+ LL K +T+ + + YL QI+ G Y H ++
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNRVI 139
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N ++ + VKI DFGLA ++ E G+ Y APE L G +S
Sbjct: 140 HRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFE 197
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNR 242
VDVW++ C + ++G P ET
Sbjct: 198 VDVWSIGCIMYTL---------------------LVGKPPFETSCLKETYLRIK------ 230
Query: 243 SPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
K+ ++ + P L+++ML DP+ R T E L E+F
Sbjct: 231 ---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIP---IMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
+G + D+ T + K +P ++ P + S+ E+S+ + L H+++V
Sbjct: 27 KGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM--EISIHRSLAHQHVV---G 81
Query: 67 VQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ D VF L+ LL K +T+ + + YL QI+ G Y H ++
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNRVI 139
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N ++ + VKI DFGLA ++ E G+ Y APE L G +S
Sbjct: 140 HRDLKLGNLFLNEDLE-VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFE 197
Query: 183 VDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNR 242
VDVW++ C + ++G P ET
Sbjct: 198 VDVWSIGCIMYTL---------------------LVGKPPFETSCLKETYLRIK------ 230
Query: 243 SPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
K+ ++ + P L+++ML DP+ R T E L E+F
Sbjct: 231 ---KNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ I G +G D LT + V VK I + +V RE+ + L+H N
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI---ERGAAIDENVQREIINHRSLRHPN 77
Query: 61 IVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
IVR V + + ++ E +L + +++ + + Q+L GV+YCHS
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF--FFQQLLSGVSYCHSM 135
Query: 120 EILHRDLKPANFLIDRS-KDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+I HRDLK N L+D S +KI DFG ++ V G+ Y APE LL
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKS-SVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAP 208
DVW+ T M+ F P
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEP 224
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 135/332 (40%), Gaps = 54/332 (16%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKEL-KHE 59
RY + +I +G +G V +A+D + + V +K I+ + + EV LL+ + KH+
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNKHD 111
Query: 60 N-----IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
IV L + + LVFE L ++L ++ + +K+ Q+ +
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 115 YCHSQE--ILHRDLKPANFLI-DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ + E I+H DLKP N L+ + + +KI DFG + + + S Y++PE
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXI---QSRFYRSPE 228
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
LLG Y +D+W++ C EM T + LF + I ++G P + L
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 287
Query: 232 XXXXXXXXP----NRSPIKD----------------LATVVGGLEPDG------------ 259
P N KD L GG P G
Sbjct: 288 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG--PGGRRAGESGHTVAD 345
Query: 260 ----VDLLRRMLCLDPSKRLTAREALRHEYFK 287
DL+ RML DP R+ AL+H +FK
Sbjct: 346 YLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 36 MNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSSVDSIDLV-----FENLDF------- 83
M+ E V+ + LLK + E + + + S+D+ +V FE+ DF
Sbjct: 48 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 107
Query: 84 ----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI 139
LL K VT+ + + ++ Q + GV Y H+ ++HRDLK N ++ D
Sbjct: 108 CRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 164
Query: 140 VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQ 199
VKI DFGLA I+ E G+ Y APE L G +S VD+W++ C +
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTL---- 219
Query: 200 RLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDG 259
++G P ET K+ +V + P
Sbjct: 220 -----------------LVGKPPFETSCLKETYIRIK---------KNEYSVPRHINPVA 253
Query: 260 VDLLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP+ R + E L E+F
Sbjct: 254 SALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+T LE I +G +G V + D+ T V +K I + + + +E+++L + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSSYV 83
Query: 62 VRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+ + ++ E L L ++ P + +I L +IL G+ Y HS++
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF---DEFQIATMLKEILKGLDYLHSEK 140
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERLLGSGRY 179
+HRD+K AN L+ D VK+ADFG+A + D ++ T G + APE + S Y
Sbjct: 141 KIHRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPEVIQQSA-Y 197
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXX 239
+ D+W++ T E+ + P+S+ P
Sbjct: 198 DSKADIWSLGITAIELAKGE--------------------PPNSDMHPMRVLFLI----- 232
Query: 240 PNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P +P T+VG + + L DPS R TA+E L+H++
Sbjct: 233 PKNNP----PTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 110/267 (41%), Gaps = 50/267 (18%)
Query: 36 MNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSSVDSIDLV-----FENLDF------- 83
M+ E V+ + LLK + E + + + S+D+ +V FE+ DF
Sbjct: 64 MDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEI 123
Query: 84 ----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI 139
LL K VT+ + + ++ Q + GV Y H+ ++HRDLK N ++ D
Sbjct: 124 CRRRSLLELHKRRKAVTEP--EARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 180
Query: 140 VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQ 199
VKI DFGLA I+ E G+ Y APE L G +S VD+W++ C +
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTL---- 235
Query: 200 RLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDG 259
++G P ET K+ +V + P
Sbjct: 236 -----------------LVGKPPFETSCLKETYIRIK---------KNEYSVPRHINPVA 269
Query: 260 VDLLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP+ R + E L E+F
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 135/332 (40%), Gaps = 54/332 (16%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKEL-KHE 59
RY + +I +G +G V +A+D + + V +K I+ + + EV LL+ + KH+
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNKHD 111
Query: 60 N-----IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
IV L + + LVFE L ++L ++ + +K+ Q+ +
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 171
Query: 115 YCHSQE--ILHRDLKPANFLI-DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ + E I+H DLKP N L+ + + +KI DFG + + + S Y++PE
Sbjct: 172 FLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXI---QSRFYRSPE 228
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
LLG Y +D+W++ C EM T + LF + I ++G P + L
Sbjct: 229 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 287
Query: 232 XXXXXXXXP----NRSPIKD----------------LATVVGGLEPDG------------ 259
P N KD L GG P G
Sbjct: 288 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG--PGGRRAGESGHTVAD 345
Query: 260 ----VDLLRRMLCLDPSKRLTAREALRHEYFK 287
DL+ RML DP R+ AL+H +FK
Sbjct: 346 YLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 135/332 (40%), Gaps = 54/332 (16%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKEL-KHE 59
RY + +I +G +G V +A+D + + V +K I+ + + EV LL+ + KH+
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK---IIKNKKAFLNQAQIEVRLLELMNKHD 92
Query: 60 N-----IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
IV L + + LVFE L ++L ++ + +K+ Q+ +
Sbjct: 93 TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALL 152
Query: 115 YCHSQE--ILHRDLKPANFLI-DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ + E I+H DLKP N L+ + + +KI DFG + + + S Y++PE
Sbjct: 153 FLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXI---QSRFYRSPE 209
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXX 231
LLG Y +D+W++ C EM T + LF + I ++G P + L
Sbjct: 210 VLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPK 268
Query: 232 XXXXXXXXP----NRSPIKD----------------LATVVGGLEPDG------------ 259
P N KD L GG P G
Sbjct: 269 ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG--PGGRRAGESGHTVAD 326
Query: 260 ----VDLLRRMLCLDPSKRLTAREALRHEYFK 287
DL+ RML DP R+ AL+H +FK
Sbjct: 327 YLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ + EG +G V D G + V KI I N + ++ + E+++LK++K ++
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKI-IRNVGKYREAARL-EINVLKKIKEKD 77
Query: 61 ------IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL-KIKKYLHQILHGV 113
V + + + + + FE L + F+K E PL ++ +Q+ H +
Sbjct: 78 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLK-ENNFQPYPLPHVRHMAYQLCHAL 136
Query: 114 AYCHSQEILHRDLKPANFLIDRSK------------------DIVKIADFGLARPIDVPL 155
+ H ++ H DLKP N L S+ +++ADFG A
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDH 193
Query: 156 ENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIF 215
E++T + Y+ PE +L G ++ P DVW++ C E LF + L +
Sbjct: 194 EHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 216 SIMGTPDSETLPXXXXXXXXXX--------------XXPNRSPIKDLATVVGGLEPDGVD 261
I+G S + N P+K D
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 262 LLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP++R+T EAL H +F
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ + EG +G V D G + V KI I N + ++ + E+++LK++K ++
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKI-IRNVGKYREAARL-EINVLKKIKEKD 86
Query: 61 ------IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL-KIKKYLHQILHGV 113
V + + + + + FE L + F+K E PL ++ +Q+ H +
Sbjct: 87 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLK-ENNFQPYPLPHVRHMAYQLCHAL 145
Query: 114 AYCHSQEILHRDLKPANFLIDRSK------------------DIVKIADFGLARPIDVPL 155
+ H ++ H DLKP N L S+ +++ADFG A
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDH 202
Query: 156 ENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIF 215
E++T + Y+ PE +L G ++ P DVW++ C E LF + L +
Sbjct: 203 EHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 261
Query: 216 SIMGTPDSETLPXXXXXXXXXX--------------XXPNRSPIKDLATVVGGLEPDGVD 261
I+G S + N P+K D
Sbjct: 262 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 321
Query: 262 LLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP++R+T EAL H +F
Sbjct: 322 LMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
L E I G +G V V VK P + + + ++E +LK+ H NIV
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIV 175
Query: 63 RLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQI---LHGVAYCHS 118
RL+ V + I +V E + D L F++TE L++K L + G+ Y S
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLES 231
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG----SLCYKAPERLL 174
+ +HRDL N L+ K+++KI+DFG++R + Y GG + + APE L
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPE-AL 287
Query: 175 GSGRYSTPVDVWAVACTFAEMVT 197
GRYS+ DVW+ E +
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS 310
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 46/325 (14%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ + EG +G V D G + V KI I N + ++ + E+++LK++K ++
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKI-IRNVGKYREAARL-EINVLKKIKEKD 109
Query: 61 ------IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL-KIKKYLHQILHGV 113
V + + + + + FE L + F+K E PL ++ +Q+ H +
Sbjct: 110 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLK-ENNFQPYPLPHVRHMAYQLCHAL 168
Query: 114 AYCHSQEILHRDLKPANFLIDRSK------------------DIVKIADFGLARPIDVPL 155
+ H ++ H DLKP N L S+ +++ADFG A
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDH 225
Query: 156 ENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIF 215
E++T + Y+ PE +L G ++ P DVW++ C E LF + L +
Sbjct: 226 EHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 284
Query: 216 SIMGTPDSETLPXXXXXXXXXX--------------XXPNRSPIKDLATVVGGLEPDGVD 261
I+G S + N P+K D
Sbjct: 285 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 344
Query: 262 LLRRMLCLDPSKRLTAREALRHEYF 286
L+RRML DP++R+T EAL H +F
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +E+I G +G V +A + G T V+K++ N REV L +L H NI
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEK------AEREVKALAKLDHVNI 66
Query: 62 VRLLNV-------------QSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKK 104
V SS +F ++F L +++ + + +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 105 YLHQILHGVAYCHSQEILHRDLKPAN-FLIDRSKDIVKIADFGLARPIDVPLENYTIKGG 163
QI GV Y HS+++++RDLKP+N FL+D + VKI DFGL + + K G
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ--VKIGDFGLVTSLKNDGKRXRSK-G 183
Query: 164 SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMV 196
+L Y +PE+ + S Y VD++A+ AE++
Sbjct: 184 TLRYMSPEQ-ISSQDYGKEVDLYALGLILAELL 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 83 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 142 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGR-XHDEKVDLWSL 197
Query: 189 ACTFAEMV 196
E +
Sbjct: 198 GVLCYEFL 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 22 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 81
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 82 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 141 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 196
Query: 189 ACTFAEMV 196
E +
Sbjct: 197 GVLCYEFL 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 81 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 140 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 195
Query: 189 ACTFAEMV 196
E +
Sbjct: 196 GVLCYEFL 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
EG +G V + + TG+ V VK + + S +E+ +L+ L HE+I++
Sbjct: 41 EGHFGKVSLYCYDPTNDGTGEMVAVKALK-ADAGPQHRSGWKQEIDILRTLYHEHIIKYK 99
Query: 66 NV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
+ S+ LV E + L ++ L + + QI G+AY H+Q +H
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQHYIH 157
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPERLLGSGRYST 181
RDL N L+D + +VKI DFGLA+ + E Y ++ G S + L ++
Sbjct: 158 RDLAARNVLLDNDR-LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYY 216
Query: 182 PVDVWAVACTFAEMVTH 198
DVW+ T E++TH
Sbjct: 217 ASDVWSFGVTLYELLTH 233
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 17 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 76
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 77 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 135
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 136 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 191
Query: 189 ACTFAEMV 196
E +
Sbjct: 192 GVLCYEFL 199
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 22 KGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 81
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 82 HDATRVYLILEYAPLGTV-YRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 141 ENLLLGSNGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 196
Query: 189 ACTFAEMV 196
E +
Sbjct: 197 GVLCYEFL 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 129/324 (39%), Gaps = 44/324 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ + EG +G V + D G V KI + E + E+++L+++ ++
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKI--IKNVEKYKEAARLEINVLEKINEKD 91
Query: 61 ------IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
V++ + + + FE L F+K + +++ Q+ V
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVK 151
Query: 115 YCHSQEILHRDLKPANFL-----------IDRSKD-------IVKIADFGLARPIDVPLE 156
+ H ++ H DLKP N L +++ +D V++ DFG A E
Sbjct: 152 FLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA---TFDHE 208
Query: 157 NYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
+++ + Y+APE +L G +S P DVW++ C E LF + LA +
Sbjct: 209 HHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMER 267
Query: 217 IMGTPDSET--------------LPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDL 262
I+G S L N P++ T DL
Sbjct: 268 ILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDL 327
Query: 263 LRRMLCLDPSKRLTAREALRHEYF 286
+ ML +P+KRLT EAL+H +F
Sbjct: 328 IESMLEYEPAKRLTLGEALQHPFF 351
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTXLCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 83 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 142 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 197
Query: 189 ACTFAEMV 196
E +
Sbjct: 198 GVLCYEFL 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 81 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 140 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 195
Query: 189 ACTFAEMV 196
E +
Sbjct: 196 GVLCYEFL 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
L E I G +G V V VK P + + + ++E +LK+ H NIV
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD-LKAKFLQEARILKQYSHPNIV 175
Query: 63 RLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQI---LHGVAYCHS 118
RL+ V + I +V E + D L F++TE L++K L + G+ Y S
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLES 231
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYKAPERLLGS 176
+ +HRDL N L+ K+++KI+DFG++R V + ++ + + APE L
Sbjct: 232 KCCIHRDLAARNCLVT-EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE-ALNY 289
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
GRYS+ DVW+ E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 117/280 (41%), Gaps = 33/280 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A + TG V VKK+ + + EV ++++ H+N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR--ELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++Y H+Q ++HRD+K
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ S +K++DFG + + G+ + APE ++ Y T VD+W+
Sbjct: 169 SDSILLT-SDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE-VISRLPYGTEVDIWS 226
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EM+ G P P P R +KD
Sbjct: 227 LGIMVIEMID---------------------GEPPYFNEPPLQAMRRIRDSLPPR--VKD 263
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
L V L L ML +PS+R TA+E L H + K
Sbjct: 264 LHKVSSVLR----GFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ +LE + EG YG+V++A TG V +K++P+ E +I+E+S++++ ++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV----ESDLQEIIKEISIMQQCDSPHV 86
Query: 62 VRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
V+ + +V E D++ T+T++ +I L L G+ Y H
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK--TLTED--EIATILQSTLKGLEYLH 142
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
+HRD+K N L++ ++ K+ADFG+A + + G+ + APE + G
Sbjct: 143 FMRKIHRDIKAGNILLN-TEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 178 RYSTPVDVWAVACTFAEMV 196
Y+ D+W++ T EM
Sbjct: 202 -YNCVADIWSLGITAIEMA 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 37/233 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHD----SLTGDTVVVKKIPIMNPS----------------- 39
+YTL + I +G YG V A++ + V+ KK I
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 40 ---EGVPSSVIREVSLLKELKHENIVRLLNV--QSSVDSIDLVFENLDFDLLHFMKTEPT 94
G V +E+++LK+L H N+V+L+ V + D + +VFE ++ + + T
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 95 VTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--- 151
++++ + Y ++ G+ Y H Q+I+HRD+KP+N L+ I KIADFG++
Sbjct: 134 LSEDQARF--YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHI-KIADFGVSNEFKGS 190
Query: 152 DVPLENYTIKGGSLCYKAPERLLGSGRY--STPVDVWAVACTFAEMVTHQRLF 202
D L N G+ + APE L + + +DVWA+ T V Q F
Sbjct: 191 DALLSNTV---GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 80
Query: 59 ENIVRLLNVQ--------SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 131
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++Y ++ +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 191 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 220
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + +K + GV + REV + L+H NI+RL
Sbjct: 15 KGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 74
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 75 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 133
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 134 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 189
Query: 189 ACTFAEMV 196
E +
Sbjct: 190 GVLCYEFL 197
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 79 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + P T G+L Y PE + G + VD+W++
Sbjct: 138 ENLLLGSAGEL-KIADFGWS--CHAPSSRRTTLSGTLDYLPPEMIEGR-MHDEKVDLWSL 193
Query: 189 ACTFAEMV 196
E +
Sbjct: 194 GVLCYEFL 201
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 103
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 104 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 163 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 218
Query: 189 ACTFAEMVTHQRLFHS 204
E + + F +
Sbjct: 219 GVLCYEFLVGKPPFEA 234
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 70
Query: 59 ENIVRLLNVQ--------SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 121
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++Y ++ +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 181 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 74
Query: 59 ENIVRLLNVQ--------SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 75 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 125
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++Y ++ +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 185 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 70
Query: 59 ENIVRLLNVQ--------SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 121
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++Y ++ +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 181 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 36/277 (12%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 35 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 94
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 95 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 153
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 154 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 209
Query: 189 ACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDL 248
G+L F ++G P P +R
Sbjct: 210 --------------------GVLCYEF-LVGKP-----PFEANTYQETYKRISRVEFTFP 243
Query: 249 ATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
V G DL+ R+L +PS+R RE L H +
Sbjct: 244 DFVTEG----ARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 74
Query: 59 ENIVRLLNVQ--------SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 75 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 125
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++Y ++ +
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 185 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 214
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 130/299 (43%), Gaps = 41/299 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPI----MNPS--EGVPSSVIREVSLLK 54
+Y +VI G V R TG VK + + ++P E V + RE +L+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 55 ELK-HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
++ H +I+ L++ S + LVF+ + L TE V + + + + +L V
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAV 213
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
++ H+ I+HRDLKP N L+D + I +++DFG + ++ P E G+ Y APE L
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQI-RLSDFGFSCHLE-PGEKLRELCGTPGYLAPEIL 271
Query: 174 LGSGR-----YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
S Y VD+WA ++ F W + + IM + P
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF---WHRRQILMLRMIMEGQYQFSSPE 328
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK 287
D ++ V DL+ R+L +DP RLTA +AL+H +F+
Sbjct: 329 ----------------WDDRSSTVK-------DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTELCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 83 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 142 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGR-MHDEKVDLWSL 197
Query: 189 ACTFAEMV 196
E +
Sbjct: 198 GVLCYEFL 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 79 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 138 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTDLCGTLDYLPPEMIEGR-MHDEKVDLWSL 193
Query: 189 ACTFAEMV 196
E +
Sbjct: 194 GVLCYEFL 201
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 81 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIA+FG + + P T G+L Y PE + G + VD+W++
Sbjct: 140 ENLLLGSAGEL-KIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 195
Query: 189 ACTFAEMV 196
E +
Sbjct: 196 GVLCYEFL 203
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 33/248 (13%)
Query: 42 VPSSVIR-EVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPL 100
V ++R E+ +L L H NI++L + + I LV E + L F + +
Sbjct: 90 VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL-FDRIVEKGYYSER 148
Query: 101 KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDR-SKDI-VKIADFGLARPIDVPLENY 158
+ QIL VAY H I+HRDLKP N L + D +KIADFGL++ ++ +
Sbjct: 149 DAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 159 TIKGGSLCYKAPERLLGSGRYSTPVDVWAVA-CTFAEMVTHQRLFHSRWAPGLLAAIFSI 217
T+ G+ Y APE L G Y VD+W+V T+ + + + R + I +
Sbjct: 209 TV-CGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC 266
Query: 218 MGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTA 277
SP D ++ + DL+R+++ LDP KRLT
Sbjct: 267 --------------------EYYFISPWWDEVSL------NAKDLVRKLIVLDPKKRLTT 300
Query: 278 REALRHEY 285
+AL+H +
Sbjct: 301 FQALQHPW 308
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 20 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 79
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 80 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 138
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIA+FG + + P T G+L Y PE + G + VD+W++
Sbjct: 139 ENLLLGSAGEL-KIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 194
Query: 189 ACTFAEMV 196
E +
Sbjct: 195 GVLCYEFL 202
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 41/254 (16%)
Query: 45 SVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK 103
+ ++EV +L+++ H NI++L + + LVF+ + L TE VT + + +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 127
Query: 104 KYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG 163
K + +L + H I+HRDLKP N L+D +I K+ DFG + +D P E G
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFSCQLD-PGEKLRSVCG 185
Query: 164 SLCYKAPERLLGSGR-----YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS-- 216
+ Y APE + S Y VD+W+ ++ F R +L I S
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 217 -IMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRL 275
G+P+ + D + V DL+ R L + P KR
Sbjct: 246 YQFGSPEWD----------------------DYSDTVK-------DLVSRFLVVQPQKRY 276
Query: 276 TAREALRHEYFKDF 289
TA EAL H +F+ +
Sbjct: 277 TAEEALAHPFFQQY 290
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 115/293 (39%), Gaps = 48/293 (16%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVV---VKKIPIMNPSEGVPSSVIREVSLLKELKH 58
+ +EV+ G + V LTG +KK P S S+ E+++LK++KH
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDS-----SLENEIAVLKKIKH 65
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
ENIV L ++ S LV + + +L + T+ + + Q+L V Y H
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL--VIQQVLSAVKYLH 123
Query: 118 SQEILHRDLKPAN--FLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPER 172
I+HRDLKP N +L + I DFGL++ +E I G+ Y APE
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-----MEQNGIMSTACGTPGYVAPE- 177
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXX 232
+L YS VD W++ G++ I P E
Sbjct: 178 VLAQKPYSKAVDCWSI--------------------GVITYILLCGYPPFYEETESKLFE 217
Query: 233 XXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
SP D + D + +L DP++R T +AL H +
Sbjct: 218 KIKEGYYEFESPFWD------DISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 81 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 140 ENLLLGSAGEL-KIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGR-MHDEKVDLWSL 195
Query: 189 ACTFAEMV 196
E +
Sbjct: 196 GVLCYEFL 203
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSS---VIREVSLLKELKHE 59
TL E+I G +G V+RA GD V VK +P E + + V +E L LKH
Sbjct: 10 TLEEIIGIGGFGKVYRAF--WIGDEVAVKAAR-HDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI+ L V ++ LV E L+ + + + P + + QI G+ Y H +
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP--PDILVNWAVQIARGMNYLHDE 124
Query: 120 EI---LHRDLKPANFLI-------DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKA 169
I +HRDLK +N LI D S I+KI DFGLAR + G+ + A
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHRTTKMSAAGAYAWMA 182
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHS 204
PE + S +S DVW+ E++T + F
Sbjct: 183 PEVIRAS-MFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 41/254 (16%)
Query: 45 SVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK 103
+ ++EV +L+++ H NI++L + + LVF+ + L TE VT + + +
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 127
Query: 104 KYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG 163
K + +L + H I+HRDLKP N L+D +I K+ DFG + +D P E G
Sbjct: 128 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFSCQLD-PGEKLREVCG 185
Query: 164 SLCYKAPERLLGSGR-----YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS-- 216
+ Y APE + S Y VD+W+ ++ F R +L I S
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 245
Query: 217 -IMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRL 275
G+P+ + D + V DL+ R L + P KR
Sbjct: 246 YQFGSPEWD----------------------DYSDTVK-------DLVSRFLVVQPQKRY 276
Query: 276 TAREALRHEYFKDF 289
TA EAL H +F+ +
Sbjct: 277 TAEEALAHPFFQQY 290
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 81 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 140 ENLLLGSAGEL-KIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGR-MHDEKVDLWSL 195
Query: 189 ACTFAEMV 196
E +
Sbjct: 196 GVLCYEFL 203
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 144 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 199
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 200 VWAFGVLLWEIATY 213
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 83 HDATRVYLILEYAPRGEV-YKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P T G+L Y PE + G + VD+W++
Sbjct: 142 ENLLLGSAGEL-KIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 197
Query: 189 ACTFAEMV 196
E +
Sbjct: 198 GVLCYEFL 205
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 41/254 (16%)
Query: 45 SVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK 103
+ ++EV +L+++ H NI++L + + LVF+ + L TE VT + + +
Sbjct: 56 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETR 114
Query: 104 KYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG 163
K + +L + H I+HRDLKP N L+D +I K+ DFG + +D P E G
Sbjct: 115 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNI-KLTDFGFSCQLD-PGEKLREVCG 172
Query: 164 SLCYKAPERLLGSGR-----YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS-- 216
+ Y APE + S Y VD+W+ ++ F R +L I S
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 232
Query: 217 -IMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRL 275
G+P+ + D + V DL+ R L + P KR
Sbjct: 233 YQFGSPEWD----------------------DYSDTVK-------DLVSRFLVVQPQKRY 263
Query: 276 TAREALRHEYFKDF 289
TA EAL H +F+ +
Sbjct: 264 TAEEALAHPFFQQY 277
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 78 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMV 196
E +
Sbjct: 193 GVLCYEFL 200
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPI-MNPSEGVPSSVIREVSLLKELKHENIVRL 64
EG +G V + + TG+ V VK + P S +E+ +L+ L HE+I++
Sbjct: 24 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH--RSGWKQEIDILRTLYHEHIIKY 81
Query: 65 LNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
S+ LV E + L ++ L + + QI G+AY HSQ +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHSQHYI 139
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGSGRY 179
HR+L N L+D + +VKI DFGLA+ + E Y ++ G S + + APE L ++
Sbjct: 140 HRNLAARNVLLDNDR-LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEYKF 197
Query: 180 STPVDVWAVACTFAEMVTH 198
DVW+ T E++TH
Sbjct: 198 YYASDVWSFGVTLYELLTH 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 52/285 (18%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 18 KGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 77
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS++++HRD+KP
Sbjct: 78 HDSTRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 137 ENLLLGSAGEL-KIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEGR-MHDEKVDLWSL 192
Query: 189 ACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDL 248
G+L F ++G P E + +D
Sbjct: 193 --------------------GVLCYEF-LVGKPPFEA-----------------NTYQDT 214
Query: 249 ATVVGGLE---PDGV-----DLLRRMLCLDPSKRLTAREALRHEY 285
+ +E PD V DL+ R+L +PS+R RE L H +
Sbjct: 215 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 22 KGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 81
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 82 HDATRVYLILEYAPLGTV-YRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKP 140
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 141 ENLLLGSNGEL-KIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 196
Query: 189 ACTFAEMV 196
E +
Sbjct: 197 GVLCYEFL 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 46/259 (17%)
Query: 40 EGVPSSVIREVSLLKELKHENIVRLLNVQSSVDSIDLVFE-----NLDFDLLHFMKTEPT 94
E + E+SLLK L H NI++L +V LV E L +++ K +
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 95 VTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI--VKIADFGLARPID 152
N +K QIL G+ Y H I+HRD+KP N L++ + +KI DFGL+
Sbjct: 147 DAANIMK------QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 153 VPLENYTIKG--GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGL 210
++Y ++ G+ Y APE L +Y+ DVW+ +
Sbjct: 201 ---KDYKLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMY----------------I 239
Query: 211 LAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLD 270
L + G + + + + I D A +L++ ML D
Sbjct: 240 LLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK----------ELIKLMLTYD 289
Query: 271 PSKRLTAREALRHEYFKDF 289
+KR TA EAL + K +
Sbjct: 290 YNKRCTAEEALNSRWIKKY 308
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 19 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 78
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 79 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 137
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 138 ENLLLGSAGEL-KIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGR-MHDEKVDLWSL 193
Query: 189 ACTFAEMV 196
E +
Sbjct: 194 GVLCYEFL 201
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 18/213 (8%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIP---------IMNPSEGVPSSVIREVS 51
+Y+ + + G +G V A D VVVK I I +P G V E++
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG---KVTLEIA 81
Query: 52 LLKELKHENIVRLLNVQSSVDSIDLVFE--NLDFDLLHFMKTEPTVTKNPLKIKKYLHQI 109
+L ++H NI+++L++ + LV E DL F+ P + + PL Q+
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE-PLA-SYIFRQL 139
Query: 110 LHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKA 169
+ V Y ++I+HRD+K N +I I K+ DFG A ++ YT G++ Y A
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTI-KLIDFGSAAYLERGKLFYTF-CGTIEYCA 197
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
PE L+G+ +++W++ T +V + F
Sbjct: 198 PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 20 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 79
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 80 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 138
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 139 ENLLLGSAGEL-KIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEGR-MHDEKVDLWSL 194
Query: 189 ACTFAEMV 196
E +
Sbjct: 195 GVLCYEFL 202
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 122/303 (40%), Gaps = 44/303 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L EVI G V A+ + + V +K+I + + +++E+ + + H NI
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPL---KIKKYLHQILHGVA 114
V D + LV + L D++ + + L I L ++L G+
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFG----LARPIDVPLENYTIKG--GSLCYK 168
Y H +HRD+K N L+ V+IADFG LA D+ N K G+ C+
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGS-VQIADFGVSAFLATGGDIT-RNKVRKTFVGTPCWM 193
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE + Y D+W+ T E+ T +H P + + ++ P S
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY--PPMKVLMLTLQNDPPS----- 246
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRM--LCL--DPSKRLTAREALRHE 284
++ +K R+M LCL DP KR TA E LRH+
Sbjct: 247 ------LETGVQDKEMLKKYGKS-----------FRKMISLCLQKDPEKRPTAAELLRHK 289
Query: 285 YFK 287
+F+
Sbjct: 290 FFQ 292
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 122/303 (40%), Gaps = 44/303 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y L EVI G V A+ + + V +K+I + + +++E+ + + H NI
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPL---KIKKYLHQILHGVA 114
V D + LV + L D++ + + L I L ++L G+
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFG----LARPIDVPLENYTIKG--GSLCYK 168
Y H +HRD+K N L+ V+IADFG LA D+ N K G+ C+
Sbjct: 131 YLHKNGQIHRDVKAGNILLGEDGS-VQIADFGVSAFLATGGDIT-RNKVRKTFVGTPCWM 188
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPX 228
APE + Y D+W+ T E+ T +H P + + ++ P S
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY--PPMKVLMLTLQNDPPS----- 241
Query: 229 XXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRM--LCL--DPSKRLTAREALRHE 284
++ +K R+M LCL DP KR TA E LRH+
Sbjct: 242 ------LETGVQDKEMLKKYGKS-----------FRKMISLCLQKDPEKRPTAAELLRHK 284
Query: 285 YFK 287
+F+
Sbjct: 285 FFQ 287
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 144 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 199
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 200 VWAFGVLLWEIATY 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 139 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 194
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 195 VWAFGVLLWEIATY 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIP--IMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK + M E ++E +++KE+KH N+V+LL V
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 139 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 194
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 195 VWAFGVLLWEIATY 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 140
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 141 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 196
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 197 VWAFGVLLWEIATY 210
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 21/194 (10%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G++G V A + T V + M P + + E +++K L+H+ +V+L V +
Sbjct: 193 GQFGEVWMA--TYNKHTKVA--VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 71 VDSIDLVFENL-DFDLLHFMKTEPTVTKNPL-KIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ I ++ E + LL F+K++ +K PL K+ + QI G+A+ + +HRDL+
Sbjct: 249 -EPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 306
Query: 129 ANFLIDRSKDIVKIADFGLAR-PIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
AN L+ S + KIADFGLAR P++ + APE + G ++ DVW+
Sbjct: 307 ANILVSASL-VCKIADFGLARVGAKFPIK----------WTAPE-AINFGSFTIKSDVWS 354
Query: 188 VACTFAEMVTHQRL 201
E+VT+ R+
Sbjct: 355 FGILLMEIVTYGRI 368
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 144 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 199
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 200 VWAFGVLLWEIATY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 82
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 83 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 142
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 143 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 198
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 199 VWAFGVLLWEIATY 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 22/202 (10%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPIMNPSEGVP----SSVIREVSLLKELKHENI 61
EG +G V + + TG+ V VK + EG S RE+ +L+ L HE+I
Sbjct: 18 EGHFGKVSLYCYDPTNDGTGEMVAVKAL-----KEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 62 VRLLNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
V+ S+ LV E + L V L + + QI G+AY H+Q
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQ 130
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGS 176
+HR L N L+D + +VKI DFGLA+ + E Y ++ G S + + APE L
Sbjct: 131 HYIHRALAARNVLLDNDR-LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKE 188
Query: 177 GRYSTPVDVWAVACTFAEMVTH 198
++ DVW+ T E++T+
Sbjct: 189 CKFYYASDVWSFGVTLYELLTY 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 91
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 92 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 151
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 152 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 207
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 208 VWAFGVLLWEIATY 221
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
EG +G V + + TG+ V VK + + S RE+ +L+ L HE+IV+
Sbjct: 19 EGHFGKVSLYCYDPTNDGTGEMVAVKALK-EGCGPQLRSGWQREIEILRTLYHEHIVKYK 77
Query: 66 NV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
S+ LV E + L V L + + QI G+AY H+Q +H
Sbjct: 78 GCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHYIH 135
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGSGRYS 180
R L N L+D + +VKI DFGLA+ + E Y ++ G S + + APE L ++
Sbjct: 136 RALAARNVLLDNDR-LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKECKFY 193
Query: 181 TPVDVWAVACTFAEMVTH 198
DVW+ T E++T+
Sbjct: 194 YASDVWSFGVTLYELLTY 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 140
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 141 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 196
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 197 VWAFGVLLWEIATY 210
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 128/341 (37%), Gaps = 82/341 (24%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPS---EGVPSSVIR---EVSLLK 54
+Y L I +G YG V A + T ++ I IMN + + P V R EV L+K
Sbjct: 27 KYHLKGAIGQGSYGVVRVA---IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 55 ELKHENIVRLLNVQSSVDSIDLVFE-----------NLDFD------LLHFMKTE--PTV 95
+L H NI RL V I LV E N+ D + +KT+ P
Sbjct: 84 KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143
Query: 96 TKNPLKIKKYLH--------------------QILHGVAYCHSQEILHRDLKPANFLIDR 135
N I +H QI + Y H+Q I HRD+KP NFL
Sbjct: 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST 203
Query: 136 SKDI-VKIADFGLARPIDVPLEN-----YTIKGGSLCYKAPERLLGSGR-YSTPVDVWAV 188
+K +K+ DFGL++ L N T K G+ + APE L + Y D W+
Sbjct: 204 NKSFEIKLVDFGLSKEF-YKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 189 ACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDL 248
L H LL G D++T+ PN + + L
Sbjct: 263 GV----------LLHL-----LLMGAVPFPGVNDADTIS-QVLNKKLCFENPNYNVLSPL 306
Query: 249 ATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDF 289
A DLL +L + +R A AL+H + F
Sbjct: 307 AR----------DLLSNLLNRNVDERFDAMRALQHPWISQF 337
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 80 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 139
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 140 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAPAGAKFPIKWTAPES-LAYNKFSIKSD 195
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 196 VWAFGVLLWEIATY 209
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 114/279 (40%), Gaps = 33/279 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A +G V VKK+ + + EV ++++ +HEN+V + N
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYNS 89
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++ H+Q ++HRD+K
Sbjct: 90 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ VK++DFG + + G+ + APE L+ Y VD+W+
Sbjct: 148 SDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 205
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EMV G P P P R +K+
Sbjct: 206 LGIMVIEMVD---------------------GEPPYFNEPPLKAMKMIRDNLPPR--LKN 242
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L V P L R+L DP++R TA E L+H +
Sbjct: 243 LHKV----SPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 33/279 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A +G V VKK+ + + EV ++++ +HEN+V + N
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYNS 85
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++ H+Q ++HRD+K
Sbjct: 86 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ VK++DFG + + G+ + APE L+ Y VD+W+
Sbjct: 144 SDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 201
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EMV G P P P R +K+
Sbjct: 202 LGIMVIEMVD---------------------GEPPYFNEPPLKAMKMIRDNLPPR--LKN 238
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L V L+ L R+L DP++R TA E L+H +
Sbjct: 239 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 80
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 81 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 140
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 141 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAPAGAKFPIKWTAPES-LAYNKFSIKSD 196
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 197 VWAFGVLLWEIATY 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 21 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 80
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 81 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 139
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 140 ENLLLGSAGEL-KIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGR-MHDEKVDLWSL 195
Query: 189 ACTFAEMVTHQRLFHS 204
E + + F +
Sbjct: 196 GVLCYEFLVGKPPFEA 211
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 33/279 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A +G V VKK+ + + EV ++++ +HEN+V + N
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYNS 94
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++ H+Q ++HRD+K
Sbjct: 95 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ VK++DFG + + G+ + APE L+ Y VD+W+
Sbjct: 153 SDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 210
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EMV G P P P R +K+
Sbjct: 211 LGIMVIEMVD---------------------GEPPYFNEPPLKAMKMIRDNLPPR--LKN 247
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L V L+ L R+L DP++R TA E L+H +
Sbjct: 248 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
++ + G +G V A + + +K+I + N E V+REV L +L+H IVR
Sbjct: 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRY 68
Query: 65 LN----------VQSSVDSIDLVFENL---DFDLLHFMKTEPTVTKNPLKIKKYLH-QIL 110
N +Q S + L + +L +M T+ + + ++ QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 111 HGVAYCHSQEILHRDLKPAN--FLIDRSKDIVKIADFGLARPIDVPLENYTI-------- 160
V + HS+ ++HRDLKP+N F +D D+VK+ DFGL +D E T+
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 161 ----KGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMV 196
+ G+ Y +PE++ G+ YS VD++++ E++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 33/279 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A +G V VKK+ + + EV ++++ +HEN+V + N
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYNS 96
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++ H+Q ++HRD+K
Sbjct: 97 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ VK++DFG + + G+ + APE L+ Y VD+W+
Sbjct: 155 SDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 212
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EMV G P P P R +K+
Sbjct: 213 LGIMVIEMVD---------------------GEPPYFNEPPLKAMKMIRDNLPPR--LKN 249
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L V L+ L R+L DP++R TA E L+H +
Sbjct: 250 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 10 EGRYGAV----HRAHDSLTGDTVVVKKIPI-MNPSEGVPSSVIREVSLLKELKHENIVRL 64
EG +G V + + TG+ V VK + P S +E+ +L+ L HE+I++
Sbjct: 24 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH--RSGWKQEIDILRTLYHEHIIKY 81
Query: 65 LNV--QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
S+ LV E + L ++ L + + QI G+AY H+Q +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQHYI 139
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGSGRY 179
HR+L N L+D + +VKI DFGLA+ + E Y ++ G S + + APE L ++
Sbjct: 140 HRNLAARNVLLDNDR-LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE-CLKEYKF 197
Query: 180 STPVDVWAVACTFAEMVTH 198
DVW+ T E++TH
Sbjct: 198 YYASDVWSFGVTLYELLTH 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 33/279 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A +G V VKK+ + + EV ++++ +HEN+V + N
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYNS 139
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++ H+Q ++HRD+K
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ VK++DFG + + G+ + APE L+ Y VD+W+
Sbjct: 198 SDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 255
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EMV G P P P R +K+
Sbjct: 256 LGIMVIEMVD---------------------GEPPYFNEPPLKAMKMIRDNLPPR--LKN 292
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L V L+ L R+L DP++R TA E L+H +
Sbjct: 293 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 80
Query: 59 ENIVRLLNV--------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 131
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++ ++ +
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 191 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 220
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 26 DTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDF-D 84
D ++V + + S+ RE LL L+HE+IV+ V D + +VFE + D
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 85 LLHFMKTEP-----TVTKNP---LKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLI 133
L F++ NP L + LH QI G+ Y SQ +HRDL N L+
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV 161
Query: 134 DRSKDIVKIADFGLARPIDVPLENYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVA 189
+ +VKI DFG++R DV +Y GG + + PE ++ +++T DVW++
Sbjct: 162 GENL-LVKIGDFGMSR--DVYSTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSLG 217
Query: 190 CTFAEMVTHQR 200
E+ T+ +
Sbjct: 218 VVLWEIFTYGK 228
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 13/203 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T ++ I G++G VH + L D V +K I + SE I E ++ +L H +V
Sbjct: 30 TFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKLV 85
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+L V I LVFE ++ L +++T+ + + L + G+AY +
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 144
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+ ++ ++K++DFG+ R V + YT G+ + + +PE + R
Sbjct: 145 IHRDLAARNCLVGENQ-VIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPE-VFSFSR 200
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
YS+ DVW+ E+ + ++
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKI 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 23 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 82
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 83 HDATRVYLILEYAPRGEV-YKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 141
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 142 ENLLLGSAGEL-KIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEGR-MHDEKVDLWSL 197
Query: 189 ACTFAEMV 196
E +
Sbjct: 198 GVLCYEFL 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + + +K + GV + REV + L+H NI+RL
Sbjct: 44 KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 103
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
+ L+ E + + + + + + Y+ ++ + ++YCHS+ ++HRD+KP
Sbjct: 104 HDATRVYLILEYAPLGTV-YRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKP 162
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ + ++ KIADFG + + P G+L Y PE + G + VD+W++
Sbjct: 163 ENLLLGSAGEL-KIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEGR-MHDEKVDLWSL 218
Query: 189 ACTFAEMVTHQRLFHS 204
E + + F +
Sbjct: 219 GVLCYEFLVGKPPFEA 234
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 139 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 194
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 195 VWAFGVLLWEIATY 208
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 28/211 (13%)
Query: 4 LLEVIREGRYGAVHRAH-DSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELKH 58
LLE + +G +G V R D+ +G TV V K +++ E + IREV+ + L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM-DDFIREVNAMHSLDH 70
Query: 59 ENIVRLLNV--------QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL 110
N++RL V + + + + + L HF+ + +Y Q+
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG---------TLSRYAVQVA 121
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCY 167
G+ Y S+ +HRDL N L+ ++D+VKI DFGL R + ++ ++ +
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
APE L + +S D W T EM T+
Sbjct: 181 CAPES-LKTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 139 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 194
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 195 VWAFGVLLWEIATY 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T ++ I G++G VH + L D V +K I SE I E ++ +L H +V
Sbjct: 10 TFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLV 65
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+L V I LVFE ++ L +++T+ + + L + G+AY +
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASV 124
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+ ++ ++K++DFG+ R V + YT G+ + + +PE + R
Sbjct: 125 IHRDLAARNCLVGENQ-VIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPE-VFSFSR 180
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
YS+ DVW+ E+ + ++
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELKH 58
+ + E + G +G V R TG+ V +K+ E P + R E+ ++K+L H
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR----QELSPKNRERWCLEIQIMKKLNH 71
Query: 59 ENIVRLLNVQSSVDSI---DLVFENLDF----DLLHFMKT-EPTVTKNPLKIKKYLHQIL 110
N+V V + + DL +++ DL ++ E I+ L I
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYK 168
+ Y H I+HRDLKP N ++ I KI D G A+ +D E T G+L Y
Sbjct: 132 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYL 190
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAP 208
APE LL +Y+ VD W+ E +T R F W P
Sbjct: 191 APE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G ++ +K+ + + + +IRE+ +L E IV S
Sbjct: 27 GNGGVVTKVQHRPSG-LIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 85
Query: 71 VDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKPA 129
I + E++D L + E + + K +L G+AY + +I+HRD+KP+
Sbjct: 86 DGEISICMEHMDGGSLDQVLKEAKRIPEEI-LGKVSIAVLRGLAYLREKHQIMHRDVKPS 144
Query: 130 NFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAVA 189
N L++ S+ +K+ DFG++ + + N + G+ Y APERL G+ YS D+W++
Sbjct: 145 NILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMAPERLQGT-HYSVQSDIWSMG 200
Query: 190 CTFAEMVT 197
+ E+
Sbjct: 201 LSLVELAV 208
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELKH 58
+ + E + G +G V R TG+ V +K+ E P + R E+ ++K+L H
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR----QELSPKNRERWCLEIQIMKKLNH 72
Query: 59 ENIVRLLNVQSSVDSI---DLVFENLDF----DLLHFMKT-EPTVTKNPLKIKKYLHQIL 110
N+V V + + DL +++ DL ++ E I+ L I
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYK 168
+ Y H I+HRDLKP N ++ I KI D G A+ +D E T G+L Y
Sbjct: 133 SALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYL 191
Query: 169 APERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAP 208
APE LL +Y+ VD W+ E +T R F W P
Sbjct: 192 APE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A + +G V VK + + + EV ++++ +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR--ELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ + ++ E L L + ++ V N +I +L +AY H+Q ++HRD+K
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 128 PANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDV 185
+ L+ VK++DFG I DVP + G+ + APE ++ Y+T VD+
Sbjct: 169 SDSILLTLDGR-VKLSDFGFCAQISKDVPKRKXLV--GTPYWMAPE-VISRSLYATEVDI 224
Query: 186 WAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPI 245
W++ EMV + + S DS P P
Sbjct: 225 WSLGIMVIEMVDGEPPYFS-----------------DS---PVQAMKRLRDSPPPKLKNS 264
Query: 246 KDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
++ V+ D L RML DP +R TA+E L H +
Sbjct: 265 HKVSPVLR-------DFLERMLVRDPQERATAQELLDHPFL 298
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMN--PSEGVPSSVIREVSLLKELKHENIVRLLNV 67
EG +G V++ + + TV VKK+ M +E + +E+ ++ + +HEN+V LL
Sbjct: 41 EGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 68 QSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYCHSQE 120
S D + LV+ + D L + P PL K +G+ + H
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLSWHMRCKIAQGAANGINFLHENH 153
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGR 178
+HRD+K AN L+D + KI+DFGLAR + + G+ Y APE L G
Sbjct: 154 HIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--RGE 210
Query: 179 YSTPVDVWAVACTFAEMVT 197
+ D+++ E++T
Sbjct: 211 ITPKSDIYSFGVVLLEIIT 229
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 33/279 (11%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I EG G V A +G V VKK+ + + EV ++++ +HEN+V + N
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYNS 216
Query: 68 QSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
D + +V E L+ L + T + N +I +L ++ H+Q ++HRD+K
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRM--NEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWA 187
+ L+ VK++DFG + + G+ + APE L+ Y VD+W+
Sbjct: 275 SDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWS 332
Query: 188 VACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKD 247
+ EMV G P P P R +K+
Sbjct: 333 LGIMVIEMVD---------------------GEPPYFNEPPLKAMKMIRDNLPPR--LKN 369
Query: 248 LATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
L V L+ L R+L DP++R TA E L+H +
Sbjct: 370 LHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 78/265 (29%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
++ + G +G V A + + +K+I + N E V+REV L +L+H IVR
Sbjct: 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRY 69
Query: 65 LNV---------QSSVDSIDLVFENLDFDL----------LHFMKTEPTVTKN------P 99
N Q +D I L E+ D+ L + + +P TKN P
Sbjct: 70 FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129
Query: 100 LKIKKYLH----------------------------------QILHGVAYCHSQEILHRD 125
K YL+ QI V + HS+ ++HRD
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 126 LKPAN--FLIDRSKDIVKIADFGLARPIDVPLENYTI------------KGGSLCYKAPE 171
LKP+N F +D D+VK+ DFGL +D E T+ + G+ Y +PE
Sbjct: 190 LKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE 246
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMV 196
++ G+ YS VD++++ E++
Sbjct: 247 QIHGNN-YSHKVDIFSLGLILFELL 270
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSS----VIREVSLLKEL-KHEN 60
+V+ G +G V A T V ++ + E SS ++ E+ ++ +L HEN
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 61 IVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-------EPTVTKNPLKIKK-------- 104
IV LL + I L+FE + DLL+++++ + +N ++++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 105 ------YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ +Q+ G+ + + +HRDL N L+ K +VKI DFGLAR I + NY
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK-VVKICDFGLARDI-MSDSNY 228
Query: 159 TIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
++G + + + APE L G Y+ DVW+ E+ +
Sbjct: 229 VVRGNARLPVKWMAPESLF-EGIYTIKSDVWSYGILLWEIFS 269
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMN--PSEGVPSSVIREVSLLKELKHENIVRLLNV 67
EG +G V++ + + TV VKK+ M +E + +E+ ++ + +HEN+V LL
Sbjct: 41 EGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98
Query: 68 QSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYCHSQE 120
S D + LV+ + D L + P PL K +G+ + H
Sbjct: 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLSWHMRCKIAQGAANGINFLHENH 153
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGR 178
+HRD+K AN L+D + KI+DFGLAR + + G+ Y APE L G
Sbjct: 154 HIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--RGE 210
Query: 179 YSTPVDVWAVACTFAEMVT 197
+ D+++ E++T
Sbjct: 211 ITPKSDIYSFGVVLLEIIT 229
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 144 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 199
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 200 VWAFGVLLWEIATY 213
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 139 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 194
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 195 VWAFGVLLWEIATY 208
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMN--PSEGVPSSVIREVSLLKELKHENIVRLLNV 67
EG +G V++ + + TV VKK+ M +E + +E+ ++ + +HEN+V LL
Sbjct: 35 EGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 92
Query: 68 QSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYCHSQE 120
S D + LV+ + D L + P PL K +G+ + H
Sbjct: 93 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLSWHMRCKIAQGAANGINFLHENH 147
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGR 178
+HRD+K AN L+D + KI+DFGLAR + + G+ Y APE L G
Sbjct: 148 HIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--RGE 204
Query: 179 YSTPVDVWAVACTFAEMVT 197
+ D+++ E++T
Sbjct: 205 ITPKSDIYSFGVVLLEIIT 223
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 46 VIREVSLLKELKHENIVRLLNVQSSVDSIDLVFE-----NLDFDLLHFMKTEPTVTKNPL 100
+ E +L+++ +V L + D++ LV +L F + H + +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 101 KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI 160
Y +I G+ H + I++RDLKP N L+D I +I+D GLA + VP E TI
Sbjct: 291 ----YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHI-RISDLGLA--VHVP-EGQTI 342
Query: 161 KG--GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIM 218
KG G++ Y APE ++ + RY+ D WA+ C EM+ Q F R
Sbjct: 343 KGRVGTVGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR------------- 388
Query: 219 GTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVV-----GGLEPDGVDLLRRMLCLDPSK 273
R ++ L V P L ++LC DP++
Sbjct: 389 ------------------KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAE 430
Query: 274 RL-----TAREALRHEYFK 287
RL +ARE H FK
Sbjct: 431 RLGCRGGSAREVKEHPLFK 449
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 139 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 194
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 195 VWAFGVLLWEIATY 208
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T ++ I G++G VH + L D V +K I SE I E ++ +L H +V
Sbjct: 13 TFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLV 68
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+L V I LVFE ++ L +++T+ + + L + G+AY +
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 127
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+ ++ ++K++DFG+ R V + YT G+ + + +PE + R
Sbjct: 128 IHRDLAARNCLVGENQ-VIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPE-VFSFSR 183
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
YS+ DVW+ E+ + ++
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HRDL N ++ VKI DFG+ R D+ +Y KGG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 10 EGRYGAVHRA--HDSL-TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
EG +G V A H+ L D ++V + SE RE LL L+H++IVR
Sbjct: 22 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFG 81
Query: 67 VQSSVDSIDLVFENLDF-DLLHFMKTE----------PTVTKNPLKIKKYL---HQILHG 112
V + + +VFE + DL F+++ V PL + + L Q+ G
Sbjct: 82 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 141
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC---YKA 169
+ Y +HRDL N L+ + +VKI DFG++R I + Y + G ++ +
Sbjct: 142 MVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMP 199
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQR 200
PE +L +++T DVW+ E+ T+ +
Sbjct: 200 PESILYR-KFTTESDVWSFGVVLWEIFTYGK 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 76
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 77 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HRDL N ++ VKI DFG+ R D+ +Y KGG
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTR--DIYETDYYRKGGKGLL 193
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 194 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 139
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + T G+ + + APE L ++S D
Sbjct: 140 ARNCLVGENH-LVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPES-LAYNKFSIKSD 195
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 196 VWAFGVLLWEIATY 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 10 EGRYGAVHRA--HDSL-TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
EG +G V A H+ L D ++V + SE RE LL L+H++IVR
Sbjct: 28 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFG 87
Query: 67 VQSSVDSIDLVFENLDF-DLLHFMKTE----------PTVTKNPLKIKKYL---HQILHG 112
V + + +VFE + DL F+++ V PL + + L Q+ G
Sbjct: 88 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 147
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC---YKA 169
+ Y +HRDL N L+ + +VKI DFG++R I + Y + G ++ +
Sbjct: 148 MVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMP 205
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQR 200
PE +L +++T DVW+ E+ T+ +
Sbjct: 206 PESILYR-KFTTESDVWSFGVVLWEIFTYGK 235
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 282
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HR+L
Sbjct: 283 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLA 342
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 343 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 398
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 399 VWAFGVLLWEIATY 412
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 10 EGRYGAVHRA--HDSL-TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
EG +G V A H+ L D ++V + SE RE LL L+H++IVR
Sbjct: 51 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFG 110
Query: 67 VQSSVDSIDLVFENLDF-DLLHFMKTE----------PTVTKNPLKIKKYL---HQILHG 112
V + + +VFE + DL F+++ V PL + + L Q+ G
Sbjct: 111 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAG 170
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC---YKA 169
+ Y +HRDL N L+ + +VKI DFG++R I + Y + G ++ +
Sbjct: 171 MVYLAGLHFVHRDLATRNCLVGQGL-VVKIGDFGMSRDI-YSTDYYRVGGRTMLPIRWMP 228
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQR 200
PE +L +++T DVW+ E+ T+ +
Sbjct: 229 PESILYR-KFTTESDVWSFGVVLWEIFTYGK 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T ++ I G++G VH + L D V +K I SE I E ++ +L H +V
Sbjct: 10 TFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLV 65
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+L V I LVFE ++ L +++T+ + + L + G+AY +
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 124
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+ ++ ++K++DFG+ R V + YT G+ + + +PE + R
Sbjct: 125 IHRDLAARNCLVGENQ-VIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPE-VFSFSR 180
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
YS+ DVW+ E+ + ++
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 46 VIREVSLLKELKHENIVRLLNVQSSVDSIDLVFE-----NLDFDLLHFMKTEPTVTKNPL 100
+ E +L+++ +V L + D++ LV +L F + H + +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 101 KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI 160
Y +I G+ H + I++RDLKP N L+D I +I+D GLA + VP E TI
Sbjct: 291 ----YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHI-RISDLGLA--VHVP-EGQTI 342
Query: 161 KG--GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIM 218
KG G++ Y APE ++ + RY+ D WA+ C EM+ Q F R
Sbjct: 343 KGRVGTVGYMAPE-VVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR------------- 388
Query: 219 GTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVV-----GGLEPDGVDLLRRMLCLDPSK 273
R ++ L V P L ++LC DP++
Sbjct: 389 ------------------KKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAE 430
Query: 274 RL-----TAREALRHEYFK 287
RL +ARE H FK
Sbjct: 431 RLGCRGGSAREVKEHPLFK 449
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 8/202 (3%)
Query: 3 TLLEVIREGRYGAVHRAH-DSLTGDTVVVKKIPIMNP--SEGVPSSVIREVSLLKELKHE 59
T +VI G +G V++ + +G V I + +E + E ++ + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI+RL V S + ++ E ++ L E + L++ L I G+ Y +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGS 176
+HRDL N L++ S + K++DFGL+R + D P YT GG + + APE +
Sbjct: 167 NYVHRDLAARNILVN-SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPE-AISY 224
Query: 177 GRYSTPVDVWAVACTFAEMVTH 198
++++ DVW+ E++T+
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTY 246
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T ++ I G++G VH + L D V +K I SE I E ++ +L H +V
Sbjct: 8 TFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLV 63
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+L V I LVFE ++ L +++T+ + + L + G+AY +
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 122
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+ ++ ++K++DFG+ R V + YT G+ + + +PE + R
Sbjct: 123 IHRDLAARNCLVGENQ-VIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPE-VFSFSR 178
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
YS+ DVW+ E+ + ++
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHEN 60
T+ + G+YG V+ TV VK K M E ++E +++KE+KH N
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPN 316
Query: 61 IVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+V+LL V + ++ E + + +LL +++ N + + QI + Y +
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+HR+L N L+ + +VK+ADFGL+R + + YT G+ + + APE L
Sbjct: 377 NFIHRNLAARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAY 432
Query: 177 GRYSTPVDVWAVACTFAEMVTH 198
++S DVWA E+ T+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATY 454
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 14/206 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSS----VIREVSLLKELK 57
Y L ++ +G +G V H V +K IP P S EV+LL ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 58 ----HENIVRLLNVQSSVDSIDLVFENL--DFDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
H ++RLL+ + + LV E DL ++ + + + P + + Q++
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC--FFGQVVA 150
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ +CHS+ ++HRD+K N LID + K+ DFG + E YT G+ Y PE
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--EPYTDFDGTRVYSPPE 208
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ ++ P VW++ +MV
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVC 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
E+I +GR+G V+ H G+ V ++ I I +E + REV ++ +HEN+V +
Sbjct: 39 ELIGKGRFGQVY--HGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 66 NVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRD 125
S + ++ L+ + + + + K ++ +I+ G+ Y H++ ILH+D
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKD 155
Query: 126 LKPANFLIDRSKDIVKIADFGLARPIDV-----PLENYTIKGGSLCYKAPE--RLLGSGR 178
LK N D K V I DFGL V + I+ G LC+ APE R L
Sbjct: 156 LKSKNVFYDNGK--VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213
Query: 179 ------YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGT 220
+S DV+A+ + E+ H R + + P AI MGT
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYEL--HAREWPFKTQPA--EAIIWQMGT 257
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 83
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ N + + QI + Y + +HRDL
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + T G+ + + APE L ++S D
Sbjct: 144 ARNCLVGENH-LVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPES-LAYNKFSIKSD 199
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 200 VWAFGVLLWEIATY 213
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 65/297 (21%)
Query: 22 SLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFEN 80
S G V VK++ I + E+ LL E H N++R +++ + + E
Sbjct: 36 SFQGRPVAVKRMLI-----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90
Query: 81 LDFDLLHFMKTEPTVTKNPLKIKK------YLHQILHGVAYCHSQEILHRDLKPANFLID 134
+ +L ++++ V+ LK++K L QI GVA+ HS +I+HRDLKP N L+
Sbjct: 91 CNLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
Query: 135 RSKDI------------VKIADFGLARPIDVPLENYTIK----GGSLCYKAPERLLGSG- 177
S + I+DFGL + +D ++ G+ ++APE L S
Sbjct: 150 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN 209
Query: 178 -----RYSTPVDVWAVACTFAEMVTHQRL-FHSRWA--PGLLAAIFSIMGTPDSETLPXX 229
R + +D++++ C F +++ + F +++ ++ IFS+
Sbjct: 210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL------------ 257
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+RS I + DL+ +M+ DP KR TA + LRH F
Sbjct: 258 ----DEMKCLHDRSLI-----------AEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 61/293 (20%)
Query: 22 SLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFEN 80
S G V VK++ I + E+ LL E H N++R +++ + + E
Sbjct: 54 SFQGRPVAVKRMLI-----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 108
Query: 81 LDFDLLHFMKTEPTVTKNPLKIKK------YLHQILHGVAYCHSQEILHRDLKPANFLID 134
+ +L ++++ V+ LK++K L QI GVA+ HS +I+HRDLKP N L+
Sbjct: 109 CNLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
Query: 135 RSKDI------------VKIADFGLARPIDVPL----ENYTIKGGSLCYKAPERLLGSG- 177
S + I+DFGL + +D N G+ ++APE L S
Sbjct: 168 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTK 227
Query: 178 -RYSTPVDVWAVACTFAEMVTHQRL-FHSRWA--PGLLAAIFSIMGTPDSETLPXXXXXX 233
R + +D++++ C F +++ + F +++ ++ IFS+
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL---------------- 271
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+RS I + DL+ +M+ DP KR TA + LRH F
Sbjct: 272 DEMKCLHDRSLI-----------AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 61/293 (20%)
Query: 22 SLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFEN 80
S G V VK++ I + E+ LL E H N++R +++ + + E
Sbjct: 54 SFQGRPVAVKRMLI-----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 108
Query: 81 LDFDLLHFMKTEPTVTKNPLKIKK------YLHQILHGVAYCHSQEILHRDLKPANFLID 134
+ +L ++++ V+ LK++K L QI GVA+ HS +I+HRDLKP N L+
Sbjct: 109 CNLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
Query: 135 RSKDI------------VKIADFGLARPIDVPL----ENYTIKGGSLCYKAPERLLGSG- 177
S + I+DFGL + +D N G+ ++APE L S
Sbjct: 168 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTK 227
Query: 178 -RYSTPVDVWAVACTFAEMVTHQRL-FHSRWA--PGLLAAIFSIMGTPDSETLPXXXXXX 233
R + +D++++ C F +++ + F +++ ++ IFS+
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL---------------- 271
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+RS I + DL+ +M+ DP KR TA + LRH F
Sbjct: 272 DEMKCLHDRSLI-----------AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + +T G+ + + APE L ++S D
Sbjct: 137 ARNCLVGENH-LVKVADFGLSRLMTG--DTFTAHAGAKFPIKWTAPES-LAYNKFSIKSD 192
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 193 VWAFGVLLWEIATY 206
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HRDL N ++ VKI DFG+ R D+ Y KGG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTR--DIYETAYYRKGGKGLL 194
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMN--PSEGVPSSVIREVSLLKELKHENIVRLLNV 67
EG +G V++ + + TV VKK+ M +E + +E+ + + +HEN+V LL
Sbjct: 32 EGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 68 QSSVDSIDLVF----ENLDFDLLHFMKTEPTVTKNPLKIK---KYLHQILHGVAYCHSQE 120
S D + LV+ D L + P PL K +G+ + H
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-----PLSWHXRCKIAQGAANGINFLHENH 144
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERLLGSGR 178
+HRD+K AN L+D + KI+DFGLAR + + G+ Y APE L G
Sbjct: 145 HIHRDIKSANILLDEAF-TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--RGE 201
Query: 179 YSTPVDVWAVACTFAEMVT 197
+ D+++ E++T
Sbjct: 202 ITPKSDIYSFGVVLLEIIT 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
E I G +G VHRA G V VK + + + +REV+++K L+H NIV +
Sbjct: 43 EKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 66 NVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE- 120
+ ++ +V E L + LLH K+ + + + + G+ Y H++
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 121 -ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
I+HRDLK N L+D+ K VK+ DFGL+R G+ + APE +L
Sbjct: 159 PIVHRDLKSPNLLVDK-KYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPE-VLRDEPS 216
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAI 214
+ DV++ E+ T Q+ + + ++AA+
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 63 RLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYL---HQILHGVAYCHS 118
+ S+ + +V + + L H + T ++KK + Q G+ Y H+
Sbjct: 84 LFMGY-STAPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA 138
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 139 KSIIHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
S YS DV+A E++T Q
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 45 SVIREVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM--KTEPTVTKN-- 98
+++ E+ ++ L +HENIV LL + + ++ E + DLL+F+ K E + K
Sbjct: 87 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG 146
Query: 99 -PLKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP 154
PL+++ LH Q+ G+A+ S+ +HRD+ N L+ + KI DFGLAR I +
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAKIGDFGLARDI-MN 204
Query: 155 LENYTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
NY +KG + + + APE + Y+ DVW+ E+ +
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 16/166 (9%)
Query: 45 SVIREVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM--KTEPTVTKN-- 98
+++ E+ ++ L +HENIV LL + + ++ E + DLL+F+ K E + K
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG 154
Query: 99 -PLKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP 154
PL+++ LH Q+ G+A+ S+ +HRD+ N L+ + KI DFGLAR I +
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAKIGDFGLARDI-MN 212
Query: 155 LENYTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
NY +KG + + + APE + Y+ DVW+ E+ +
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFS 257
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+T L+ I +G +G V++ D+ T + V +K I + + + + +E+++L + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYI 79
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
R + ++ E L DLL E T I L +IL G+ Y H
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETY------IATILREILKGLDYLH 133
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
S+ +HRD+K AN L+ D VK+ADFG+A + G+ + APE ++
Sbjct: 134 SERKIHRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQS 191
Query: 178 RYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXX 237
Y D+W++ T E+ + P+S+ P
Sbjct: 192 AYDFKADIWSLGITAIELAKGE--------------------PPNSDLHP-----MRVLF 226
Query: 238 XXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P SP T+ G + + L DP R TA+E L+H++
Sbjct: 227 LIPKNSP----PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 36 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 94
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 95 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 152
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 153 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 208
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 209 GLSLVEMAV 217
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 19 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 78
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 79 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HR+L N ++ VKI DFG+ R D+ +Y KGG
Sbjct: 139 EIADGMAYLNAKKFVHRNLAARNCMVAHDF-TVKIGDFGMTR--DIYETDYYRKGGKGLL 195
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 196 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HR+L N ++ VKI DFG+ R D+ +Y KGG
Sbjct: 138 EIADGMAYLNAKKFVHRNLAARNCMVAHDF-TVKIGDFGMTR--DIYETDYYRKGGKGLL 194
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 65/297 (21%)
Query: 22 SLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HENIVRLLNVQSSVDSIDLVFEN 80
S G V VK++ I + E+ LL E H N++R +++ + + E
Sbjct: 36 SFQGRPVAVKRMLI-----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90
Query: 81 LDFDLLHFMKTEPTVTKNPLKIKK------YLHQILHGVAYCHSQEILHRDLKPANFLID 134
+ +L ++++ V+ LK++K L QI GVA+ HS +I+HRDLKP N L+
Sbjct: 91 CNLNLQDLVESK-NVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
Query: 135 RSKDI------------VKIADFGLARPIDVPL----ENYTIKGGSLCYKAPERLLGSG- 177
S + I+DFGL + +D N G+ ++APE L S
Sbjct: 150 TSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNN 209
Query: 178 -----RYSTPVDVWAVACTFAEMVTHQRL-FHSRWA--PGLLAAIFSIMGTPDSETLPXX 229
R + +D++++ C F +++ + F +++ ++ IFS+
Sbjct: 210 LQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSL------------ 257
Query: 230 XXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
+RS I + DL+ +M+ DP KR TA + LRH F
Sbjct: 258 ----DEMKCLHDRSLI-----------AEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 22/207 (10%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
EV+ +G +G + TG+ +V+K++ + E + ++EV +++ L+H N+++ +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKEL--IRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 66 NVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK-KYLHQILHGVAYCHSQEILHR 124
V ++ + E + L + + ++ P + + I G+AY HS I+HR
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGI-IKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHR 132
Query: 125 DLKPANFLIDRSKDIVKIADFGLAR-PIDVPLE--------------NYTIKGGSLCYKA 169
DL N L+ +K++V +ADFGLAR +D + YT+ G + A
Sbjct: 133 DLNSHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY-WMA 190
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMV 196
PE + G Y VDV++ E++
Sbjct: 191 PEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIP--IMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK + M E ++E +++KE+KH N+V+LL V
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 97
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ +V E + + +LL +++ + + QI + Y + +HRDL
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLA 157
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L +S D
Sbjct: 158 ARNCLVGENH-VVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNTFSIKSD 213
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 214 VWAFGVLLWEIATY 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 38/291 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L +++ +G +G V A T +K K ++ + V +++ + L +H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ + + +++ V E L+ DL++ +++ + + Y +I+ G+ + HS
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYAAEIILGLQFLHS 136
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+ I++RDLK N L+D+ I KIADFG+ + + G+ Y APE LLG +
Sbjct: 137 KGIVYRDLKLDNILLDKDGHI-KIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ-K 194
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
Y+ VD W+ EM+ Q FH + L +I D+ P
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-----RMDNPFYPR---------- 239
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALR-HEYFKD 288
LE + DLL ++ +P KRL R +R H F++
Sbjct: 240 ---------------WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 44 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 102
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 103 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 160
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 161 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 216
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 217 GLSLVEMAV 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + T G+ + + APE L ++S D
Sbjct: 137 ARNCLVGENH-LVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPES-LAYNKFSIKSD 192
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 193 VWAFGVLLWEIATY 206
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 74
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 75 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HRDL N ++ VKI DFG+ R D+ + KGG
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTR--DIXETDXXRKGGKGLL 191
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 192 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVK-KIPIMNPSEGVPSSV--IREVSLLKELKHENI 61
++V+ G +G V++ G+TV + I I+N + G ++V + E ++ + H ++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 62 VRLLNVQSSVDSIDLVFENLDFD-LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
VRLL V S +I LV + + LL ++ + L + + QI G+ Y +
Sbjct: 103 VRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN-WCVQIAKGMMYLEERR 160
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK-APERLLGSGRY 179
++HRDL N L+ +S + VKI DFGLAR ++ + Y GG + K + ++
Sbjct: 161 LVHRDLAARNVLV-KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 180 STPVDVWAVACTFAEMVT 197
+ DVW+ T E++T
Sbjct: 220 THQSDVWSYGVTIWELMT 237
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G+YG V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 285
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HR+L
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLA 345
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + YT G+ + + APE L ++S D
Sbjct: 346 ARNCLVGENH-LVKVADFGLSRLMTG--DTYTAHAGAKFPIKWTAPES-LAYNKFSIKSD 401
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 402 VWAFGVLLWEIATY 415
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HRDL N ++ VKI DFG+ R D+ + KGG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTR--DIXETDXXRKGGKGLL 194
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKHEN 60
+ ++ + +G++G V+ A + + +K + EGV + RE+ + L+H N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 61 IVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
I+R+ N I L+ E L + + + + + ++ ++ + YCH ++
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGEL-YKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
++HRD+KP N L+ K +KIADFG + + P G+L Y PE + G +
Sbjct: 135 VIHRDIKPENLLMG-YKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKT-HD 190
Query: 181 TPVDVWAVACTFAEMVT 197
VD+W E +
Sbjct: 191 EKVDLWCAGVLCYEFLV 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 63 RLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYL---HQILHGVAYCHS 118
+ S+ + +V + + L H + T ++KK + Q G+ Y H+
Sbjct: 84 LFMGY-STKPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA 138
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 139 KSIIHRDLKSNNIFL-HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
S YS DV+A E++T Q
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 1 RYTLLEVIREGRYGAVHR--AHDSLTGDTVVVKKIPIMNPSEGVPSSV--IREVSLLKEL 56
+ TLL + +G +G V+ A D + G+ + +N S + + + E S++K
Sbjct: 18 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 77
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKT-EPTVTKNPLKIKKYLHQILH--- 111
++VRLL V S +V E + DL ++++ P NP + L +++
Sbjct: 78 TCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 112 ----GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS--- 164
G+AY ++++ +HRDL N ++ VKI DFG+ R D+ + KGG
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDF-TVKIGDFGMTR--DIXETDXXRKGGKGLL 194
Query: 165 -LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + APE L G ++T D+W+ E+ +
Sbjct: 195 PVRWMAPES-LKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 8 IREGRYGAVHRAHDS----LTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
I EG +G V +A T+V K+ S + + RE +L+ E + NIV+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 64 LLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVT-------------------KNPLKIK 103
LL V + + L+FE + + DL F+++ T PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 104 KYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI 160
+ L Q+ G+AY ++ +HRDL N L+ + +VKIADFGL+R I + Y
Sbjct: 175 EQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM-VVKIADFGLSRNI-YSADYYKA 232
Query: 161 KGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
G + + PE + RY+T DVWA E+ ++
Sbjct: 233 DGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIFSY 272
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 124/293 (42%), Gaps = 45/293 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E I G Y R T VK +++ S+ PS I LL+ +H NI
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVK---VIDKSKRDPSEEIE--ILLRYGQHPNI 83
Query: 62 VRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+ L +V + LV E + +LL + + ++ LH I V Y HSQ
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF--VLHTIGKTVEYLHSQG 141
Query: 121 ILHRDLKPANFL-IDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYK----APERL 173
++HRDLKP+N L +D S + ++I DFG A+ + EN + + CY APE L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA--ENGLLM--TPCYTANFVAPEVL 197
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDS-ETLPXXXXX 232
G Y D+W++ M+ F + G D+ E +
Sbjct: 198 KRQG-YDEGCDIWSLGILLYTMLAGYTPFAN--------------GPSDTPEEILTRIGS 242
Query: 233 XXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
N + + + A DL+ +ML +DP +RLTA++ L+H +
Sbjct: 243 GKFTLSGGNWNTVSETAK----------DLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVK-KIPIMNPSEGVPSSV--IREVSLLKELKHENI 61
++V+ G +G V++ G+TV + I I+N + G ++V + E ++ + H ++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 62 VRLLNVQSSVDSIDLVFENLDFD-LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
VRLL V S +I LV + + LL ++ + L + + QI G+ Y +
Sbjct: 80 VRLLGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN-WCVQIAKGMMYLEERR 137
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE-RLLGSGRY 179
++HRDL N L+ +S + VKI DFGLAR ++ + Y GG + K + ++
Sbjct: 138 LVHRDLAARNVLV-KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 180 STPVDVWAVACTFAEMVT 197
+ DVW+ T E++T
Sbjct: 197 THQSDVWSYGVTIWELMT 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 17 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 134 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 189
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 190 GLSLVEMAV 198
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 17 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 134 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 189
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 190 GLSLVEMAV 198
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 20 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 78
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 79 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 137 SNILVN-SRGEIKLCDFGVSGQLIDEMANEFV--GTRSYMSPERLQGT-HYSVQSDIWSM 192
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 193 GLSLVEMAV 201
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 17 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 134 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 189
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 190 GLSLVEMAV 198
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
E I G +G VHRA G V VK + + + +REV+++K L+H NIV +
Sbjct: 43 EKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 66 NVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE- 120
+ ++ +V E L + LLH K+ + + + + G+ Y H++
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 121 -ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
I+HR+LK N L+D+ K VK+ DFGL+R + G+ + APE +L
Sbjct: 159 PIVHRNLKSPNLLVDK-KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPE-VLRDEPS 216
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAI 214
+ DV++ E+ T Q+ + + ++AA+
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 17 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 134 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 189
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 190 GLSLVEMAV 198
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 124/293 (42%), Gaps = 45/293 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E I G Y R T VK +++ S+ PS I LL+ +H NI
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVK---VIDKSKRDPSEEIE--ILLRYGQHPNI 83
Query: 62 VRLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+ L +V + LV E + +LL + + ++ LH I V Y HSQ
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF--VLHTIGKTVEYLHSQG 141
Query: 121 ILHRDLKPANFL-IDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYK----APERL 173
++HRDLKP+N L +D S + ++I DFG A+ + EN + + CY APE L
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA--ENGLLM--TPCYTANFVAPEVL 197
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDS-ETLPXXXXX 232
G Y D+W++ M+ F + G D+ E +
Sbjct: 198 KRQG-YDEGCDIWSLGILLYTMLAGYTPFAN--------------GPSDTPEEILTRIGS 242
Query: 233 XXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
N + + + A DL+ +ML +DP +RLTA++ L+H +
Sbjct: 243 GKFTLSGGNWNTVSETAK----------DLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 67
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E ++ DL F+ TE + L + + Q+L
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 125
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 183
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVC 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + +K + EGV + RE+ + L+H NI+R+ N
Sbjct: 24 KGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF 83
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
I L+ E L + + + + + ++ ++ + YCH ++++HRD+KP
Sbjct: 84 HDRKRIYLMLEFAPRGEL-YKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 142
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ K +KIADFG + + P G+L Y PE + G + VD+W
Sbjct: 143 ENLLMG-YKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCA 198
Query: 189 ACTFAEMVT 197
E +
Sbjct: 199 GVLCYEFLV 207
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 79 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 137
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 138 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 195
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 196 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 251
Query: 189 ACTFAEMV 196
+ EM
Sbjct: 252 GLSLVEMA 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQSS 70
G G V + +G V+ +K+ + + + +IRE+ +L E IV S
Sbjct: 17 GNGGVVFKVSHKPSG-LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 75
Query: 71 VDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ-EILHRDLKP 128
I + E++D L +K + + L K ++ G+ Y + +I+HRD+KP
Sbjct: 76 DGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
+N L++ S+ +K+ DFG++ + + N + G+ Y +PERL G+ YS D+W++
Sbjct: 134 SNILVN-SRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQGT-HYSVQSDIWSM 189
Query: 189 ACTFAEMVT 197
+ EM
Sbjct: 190 GLSLVEMAV 198
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 126/292 (43%), Gaps = 50/292 (17%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+T LE I +G +G V + D+ T V +K I + + + +E+++L + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED-EIEDIQQEITVLSQCDSPYV 87
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPL---KIKKYLHQILHGVA 114
+ + ++ E L DLL EP PL +I L +IL G+
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EP----GPLDETQIATILREILKGLD 138
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERL 173
Y HS++ +HRD+K AN L+ + VK+ADFG+A + D ++ T G + APE +
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPE-V 195
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ Y + D+W++ T E+ +R P P SE P
Sbjct: 196 IKQSAYDSKADIWSLGITAIEL--------ARGEP------------PHSELHP-----M 230
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P +P T+ G + + L +PS R TA+E L+H++
Sbjct: 231 KVLFLIPKNNP----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 278
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + +K + EGV + RE+ + L+H NI+R+ N
Sbjct: 25 KGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF 84
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
I L+ E L + + + + + ++ ++ + YCH ++++HRD+KP
Sbjct: 85 HDRKRIYLMLEFAPRGEL-YKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKP 143
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ K +KIADFG + + P G+L Y PE + G + VD+W
Sbjct: 144 ENLLMG-YKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCA 199
Query: 189 ACTFAEMVT 197
E +
Sbjct: 200 GVLCYEFLV 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 38/291 (13%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L +++ +G +G V A T +K K ++ + V +++ + L +H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ + + +++ V E L+ DL++ +++ + + Y +I+ G+ + HS
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATFYAAEIILGLQFLHS 137
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+ I++RDLK N L+D+ I KIADFG+ + + G+ Y APE LLG +
Sbjct: 138 KGIVYRDLKLDNILLDKDGHI-KIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ-K 195
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXX 238
Y+ VD W+ EM+ Q FH + L +I D+ P
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-----RMDNPFYPR---------- 240
Query: 239 XPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALR-HEYFKD 288
LE + DLL ++ +P KRL R +R H F++
Sbjct: 241 ---------------WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 181
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 182 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 50/292 (17%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+T LE I +G +G V + D+ T V +K I + + + + +E+++L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYV 67
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPL---KIKKYLHQILHGVA 114
+ + ++ E L DLL EP PL +I L +IL G+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EP----GPLDETQIATILREILKGLD 118
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERL 173
Y HS++ +HRD+K AN L+ + VK+ADFG+A + D ++ T G + APE +
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNTFVGTPF-WMAPE-V 175
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
+ Y + D+W++ T E+ +R P P SE P
Sbjct: 176 IKQSAYDSKADIWSLGITAIEL--------ARGEP------------PHSELHP-----M 210
Query: 234 XXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P +P T+ G + + L +PS R TA+E L+H++
Sbjct: 211 KVLFLIPKNNP----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 15 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 63 RLLNVQSSVDSIDLVFENLD-FDLLHFMKTEPTVTKNPLKIKKYL---HQILHGVAYCHS 118
+ S+ + +V + + L H + T ++KK + Q G+ Y H+
Sbjct: 72 LFMGY-STKPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLIDIARQTARGMDYLHA 126
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 127 KSIIHRDLKSNNIFL-HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
S YS DV+A E++T Q
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDT-------VVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ LL V+ +G YG V + +T V+ K + + N + + R + L+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LE 76
Query: 55 ELKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
E+KH IV L+ + + L+ E L L FM+ E YL +I +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK---GGSLCYKAPE 171
+ H + I++RDLKP N +++ VK+ DFGL + + + T+ G++ Y APE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKE---SIHDGTVTHXFCGTIEYMAPE 191
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
L+ SG ++ VD W++ +M+T
Sbjct: 192 ILMRSG-HNRAVDWWSLGALMYDMLT 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 191
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 192 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDT-------VVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ LL V+ +G YG V + +T V+ K + + N + + R + L+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI--LE 76
Query: 55 ELKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
E+KH IV L+ + + L+ E L L FM+ E YL +I +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL-FMQLEREGIFMEDTACFYLAEISMALG 135
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK---GGSLCYKAPE 171
+ H + I++RDLKP N +++ VK+ DFGL + + + T+ G++ Y APE
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKE---SIHDGTVTHTFCGTIEYMAPE 191
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
L+ SG ++ VD W++ +M+T
Sbjct: 192 ILMRSG-HNRAVDWWSLGALMYDMLT 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 10 EGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
+G +G+V +D L TG V VK++ P + RE+ +LK L + IV+
Sbjct: 33 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYR 90
Query: 66 NVQ--SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
V S+ LV E L L + ++ Y QI G+ Y S+ +H
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGSGRYS 180
RDL N L++ S+ VKIADFGLA+ + + + Y ++ G S + + APE L +S
Sbjct: 151 RDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES-LSDNIFS 208
Query: 181 TPVDVWAVACTFAEMVTH 198
DVW+ E+ T+
Sbjct: 209 RQSDVWSFGVVLYELFTY 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSS----VIREVSLLKELK 57
+ +L I +G +G V DT + + MN + V + V +E+ +++ L+
Sbjct: 17 FEILRAIGKGSFGKVCIVQ---KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 58 HENIVRLL-NVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +V L + Q D +V L DL + ++ + +K+ ++ +++ + Y
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL--FICELVMALDYL 131
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLE-NYTIKGGSLCYKAPERL-- 173
+Q I+HRD+KP N L+D V I DF +A + P E T G+ Y APE
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGH-VHITDFNIAAML--PRETQITTMAGTKPYMAPEMFSS 188
Query: 174 -LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
G+G YS VD W++ T E++ +R +H R
Sbjct: 189 RKGAG-YSFAVDWWSLGVTAYELLRGRRPYHIR 220
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 10 EGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
+G +G+V +D L TG V VK++ P + RE+ +LK L + IV+
Sbjct: 20 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYR 77
Query: 66 NVQ--SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
V S+ LV E L L + ++ Y QI G+ Y S+ +H
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGSGRYS 180
RDL N L++ S+ VKIADFGLA+ + + + Y ++ G S + + APE L +S
Sbjct: 138 RDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES-LSDNIFS 195
Query: 181 TPVDVWAVACTFAEMVTH 198
DVW+ E+ T+
Sbjct: 196 RQSDVWSFGVVLYELFTY 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 10 EGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
+G +G+V +D L TG V VK++ P + RE+ +LK L + IV+
Sbjct: 21 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ--QRDFQREIQILKALHSDFIVKYR 78
Query: 66 NVQ--SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
V S+ LV E L L + ++ Y QI G+ Y S+ +H
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGS-LCYKAPERLLGSGRYS 180
RDL N L++ S+ VKIADFGLA+ + + + Y ++ G S + + APE L +S
Sbjct: 139 RDLAARNILVE-SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES-LSDNIFS 196
Query: 181 TPVDVWAVACTFAEMVTH 198
DVW+ E+ T+
Sbjct: 197 RQSDVWSFGVVLYELFTY 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T ++ I G++G VH + L D V +K I SE I E ++ +L H +V
Sbjct: 11 TFVQEIGSGQFGLVHLGY-WLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLV 66
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+L V I LV E ++ L +++T+ + + L + G+AY +
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACV 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+ ++ ++K++DFG+ R V + YT G+ + + +PE + R
Sbjct: 126 IHRDLAARNCLVGENQ-VIKVSDFGMTRF--VLDDQYTSSTGTKFPVKWASPE-VFSFSR 181
Query: 179 YSTPVDVWAVACTFAEMVTHQRL 201
YS+ DVW+ E+ + ++
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 185
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 186 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDT---VVVKKIPIMNPSEGVPSSVIREVSLLKELKHE 59
T+ VI G +G V L G V +K + + +E + E S++ + H
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHP 83
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
NI+ L V + + +V E ++ L + +++ L I G+ Y
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGS 176
+HRDL N LI+ S + K++DFGL+R + D P YT +GG + + APE +
Sbjct: 144 GYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE-AIAF 201
Query: 177 GRYSTPVDVWAVACTFAEMVTH 198
++++ DVW+ E+V++
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSY 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKI-PIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
+G++G V+ A + + V +K + EGV + RE+ + L H NI+RL N
Sbjct: 33 KGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYF 92
Query: 69 SSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLKP 128
I L+ E L + + + + T + + + ++ + YCH ++++HRD+KP
Sbjct: 93 YDRRRIYLILEYAPRGEL-YKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKP 151
Query: 129 ANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVDVWAV 188
N L+ K +KIADFG + + P G+L Y PE + G ++ VD+W +
Sbjct: 152 EN-LLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGR-MHNEKVDLWCI 207
Query: 189 ACTFAEMVTHQRLFHS 204
E++ F S
Sbjct: 208 GVLCYELLVGNPPFES 223
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 184
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 185 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 63
Query: 56 LK--HENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 121
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 179
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMV 196
+ + VW++ +MV
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 178
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 126
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 127 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 182
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 183 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 117/290 (40%), Gaps = 38/290 (13%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH-ENIVRLLNVQS 69
G++ V + TG K + + + ++ E+++L+ K ++ L V
Sbjct: 40 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99
Query: 70 SVDSIDLVFENL---DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+ I L+ E + L + V++N + + + QIL GV Y H I+H DL
Sbjct: 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSEN--DVIRLIKQILEGVYYLHQNNIVHLDL 157
Query: 127 KPANFLIDRSKDI--VKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTPVD 184
KP N L+ + +KI DFG++R I E I G Y APE +L +T D
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE-YLAPE-ILNYDPITTATD 215
Query: 185 VWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSP 244
+W + ++TH F +G + ET S
Sbjct: 216 MWNIGIIAYMLLTHTSPF---------------VGEDNQETY-LNISQVNVDYSEETFSS 259
Query: 245 IKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFK--DFQSL 292
+ LAT D ++ +L +P KR TA L H + + DF++L
Sbjct: 260 VSQLAT----------DFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL 299
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 213
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 214 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 2 YTLLEVIREGRYGAV----HRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVS-LLKEL 56
+ L+VI +G +G V H+A + V+ KK + E ++ E + LLK +
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE---KHIMSERNVLLKNV 96
Query: 57 KHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
KH +V L + D + V + ++ L + P + + Y +I + Y
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-RARFYAAEIASALGYL 155
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
HS I++RDLKP N L+D IV + DFGL + + G+ Y APE +L
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLHK 213
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
Y VD W + EM+ F+SR
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 191
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 192 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIYET 184
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 185 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 125/253 (49%), Gaps = 30/253 (11%)
Query: 49 EVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDFD-LLHFMKTEPTVTKN-----PLK- 101
E+ ++ ++K+E + + ++ D + +++E ++ D +L F + + KN P++
Sbjct: 93 ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 102 IKKYLHQILHGVAYCHSQE-ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI 160
IK + +L+ +Y H+++ I HRD+KP+N L+D++ VK++DFG + + + I
Sbjct: 153 IKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR-VKLSDFGESE----YMVDKKI 207
Query: 161 KG--GSLCYKAPERLLGSGRYS-TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSI 217
KG G+ + PE Y+ VD+W++ M + F + + L +F+
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVELFNN 264
Query: 218 MGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGG--LEPDGVDLLRRMLCLDPSKRL 275
+ T + E P P+ + + L + +D L+ L +P++R+
Sbjct: 265 IRTKNIE-YPLDRNHFLY--------PLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315
Query: 276 TAREALRHEYFKD 288
T+ +AL+HE+ D
Sbjct: 316 TSEDALKHEWLAD 328
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQS 69
+G +G V++A + TG K I SE I E+ +L H IV+LL
Sbjct: 21 DGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 70 SVDSIDLVFE-----NLDFDLLHFMK--TEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ ++ E +D +L + TEP +I+ Q+L + + HS+ I+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------QIQVVCRQMLEALNFLHSKRII 131
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N L+ DI ++ADFG++ L+ G+ + APE ++ TP
Sbjct: 132 HRDLKAGNVLMTLEGDI-RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 183 ----VDVWAVACTFAEMV 196
D+W++ T EM
Sbjct: 191 YDYKADIWSLGITLIEMA 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ ++ + +G +G V++A + T +V+ I SE + E+ +L H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHF----------MKTEPTVTKNPLKIKKYLHQILH 111
V+LL+ +EN + L+ F ++ E +T++ +++ Q L
Sbjct: 97 VKLLDA--------FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--VCKQTLD 146
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ Y H +I+HRDLK N L DI K+ADFG++ ++ G+ + APE
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 172 RLLGSGR----YSTPVDVWAVACTFAEMV 196
++ Y DVW++ T EM
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 21/198 (10%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQS 69
+G +G V++A + TG K I SE I E+ +L H IV+LL
Sbjct: 29 DGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 70 SVDSIDLVFE-----NLDFDLLHFMK--TEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
+ ++ E +D +L + TEP +I+ Q+L + + HS+ I+
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------QIQVVCRQMLEALNFLHSKRII 139
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYSTP 182
HRDLK N L+ DI ++ADFG++ L+ G+ + APE ++ TP
Sbjct: 140 HRDLKAGNVLMTLEGDI-RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 183 ----VDVWAVACTFAEMV 196
D+W++ T EM
Sbjct: 199 YDYKADIWSLGITLIEMA 216
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 146
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 147 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 261
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 262 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 287 K 287
+
Sbjct: 297 Q 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 146
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 147 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 261
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 262 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 287 K 287
+
Sbjct: 297 Q 297
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 133/329 (40%), Gaps = 50/329 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLT----------GDTVV-------VKKIPIMNPSEGVP 43
RY L+ + G + V A D + GD V +K + +N ++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 44 SSVIREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK 103
+ +LK L H N V + +VFE L +LL +K + +K
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVH-----VVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 104 KYLHQILHGVAYCHSQ-EILHRDLKPANFL---IDRSKDIV--KIADFGLARPIDVPLEN 157
+ Q+L G+ Y H + I+H D+KP N L +D ++++ KIAD G A D E+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EH 191
Query: 158 YTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGL------L 211
YT + Y++PE LLG+ + D+W+ AC E++T LF +
Sbjct: 192 YTNSIQTREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250
Query: 212 AAIFSIMGTPDSETLPXXXXXXXXXXXXP---NRS-----PIKDLATVVGGLEPDGV--- 260
A I ++G S L N S P++D+ T D
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 261 -DLLRRMLCLDPSKRLTAREALRHEYFKD 288
D L ML LDP KR A + H + KD
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 96 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 150
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 151 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 133/329 (40%), Gaps = 50/329 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLT----------GDTVV-------VKKIPIMNPSEGVP 43
RY L+ + G + V A D + GD V +K + +N ++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 44 SSVIREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIK 103
+ +LK L H N V + +VFE L +LL +K + +K
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVH-----VVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 104 KYLHQILHGVAYCHSQ-EILHRDLKPANFL---IDRSKDIV--KIADFGLARPIDVPLEN 157
+ Q+L G+ Y H + I+H D+KP N L +D ++++ KIAD G A D E+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD---EH 191
Query: 158 YTIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGL------L 211
YT + Y++PE LLG+ + D+W+ AC E++T LF +
Sbjct: 192 YTNSIQTREYRSPEVLLGA-PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250
Query: 212 AAIFSIMGTPDSETLPXXXXXXXXXXXXP---NRS-----PIKDLATVVGGLEPDGV--- 260
A I ++G S L N S P++D+ T D
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 261 -DLLRRMLCLDPSKRLTAREALRHEYFKD 288
D L ML LDP KR A + H + KD
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 68 LFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 122
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 123 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 31 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 88 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 142
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 143 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 15/194 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQ 68
G++G V+ TV VK K M E ++E +++KE+KH N+V+LL V
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 69 SSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+ ++ E + + +LL +++ + + + QI + Y + +HRDL
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 128 PANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVD 184
N L+ + +VK+ADFGL+R + + T G+ + + APE L ++S D
Sbjct: 137 ARNCLVGENH-LVKVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPES-LAYNKFSIKSD 192
Query: 185 VWAVACTFAEMVTH 198
VWA E+ T+
Sbjct: 193 VWAFGVLLWEIATY 206
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGLAR + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 90
Query: 56 LK--HENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 148
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 206
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVC 232
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 130
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 131 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 245
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 246 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 280
Query: 287 K 287
+
Sbjct: 281 Q 281
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 68 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 122
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 123 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 126
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 127 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 241
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 242 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 276
Query: 287 K 287
+
Sbjct: 277 Q 277
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 63
Query: 56 LK--HENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 121
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 179
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVC 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ ++ + +G +G V++A + T +V+ I SE + E+ +L H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHF----------MKTEPTVTKNPLKIKKYLHQILH 111
V+LL+ +EN + L+ F ++ E +T++ +++ Q L
Sbjct: 97 VKLLDA--------FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--VCKQTLD 146
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ Y H +I+HRDLK N L DI K+ADFG++ ++ G+ + APE
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 172 RLLGSGR----YSTPVDVWAVACTFAEMV 196
++ Y DVW++ T EM
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 83
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 141
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 199
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVC 225
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 82
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 140
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 198
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVC 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 83
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 141
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 199
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVC 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 82
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 140
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 198
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVC 224
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 83
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 141
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 199
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVC 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 174
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 175 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 289
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 290 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 324
Query: 287 K 287
+
Sbjct: 325 Q 325
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 68
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 126
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 184
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVC 210
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 63
Query: 56 LK--HENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 121
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 179
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVC 205
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 68
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 126
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 184
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMV 196
+ + VW++ +MV
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 110
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 168
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 226
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVC 252
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+ ++ + +G +G V++A + T +V+ I SE + E+ +L H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHF----------MKTEPTVTKNPLKIKKYLHQILH 111
V+LL+ +EN + L+ F ++ E +T++ +++ Q L
Sbjct: 97 VKLLDA--------FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--VCKQTLD 146
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ Y H +I+HRDLK N L DI K+ADFG++ ++ G+ + APE
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 172 RLLGSGR----YSTPVDVWAVACTFAEMV 196
++ Y DVW++ T EM
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 110
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 168
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 226
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVC 252
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 95
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 153
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 211
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 102
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 160
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 218
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVC 244
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 96
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 154
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 212
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 115
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 173
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 231
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVC 257
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 127
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 128 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 242
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 243 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 277
Query: 287 K 287
+
Sbjct: 278 Q 278
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 96
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 154
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 212
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 95
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 153
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 211
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+T LE I +G +G V + D+ T V +K I + + + + +E+++L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYV 67
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPL---KIKKYLHQILHGVA 114
+ + ++ E L DLL EP PL +I L +IL G+
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EP----GPLDETQIATILREILKGLD 118
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS++ +HRD+K AN L+ + VK+ADFG+A + G+ + APE ++
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VI 176
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y + D+W++ T E+ +R P P SE P
Sbjct: 177 KQSAYDSKADIWSLGITAIEL--------ARGEP------------PHSELHP-----MK 211
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P +P T+ G + + L +PS R TA+E L+H++
Sbjct: 212 VLFLIPKNNP----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 66
Query: 56 LK--HENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 124
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 182
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVC 208
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 95
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 153
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 211
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 96
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 154
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 212
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 20/170 (11%)
Query: 45 SVIREVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMK-------TEPT- 94
+++ E+ ++ L +HENIV LL + + ++ E + DLL+F++ T+P
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF 154
Query: 95 -VTKNPLKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARP 150
+ + L + LH Q+ G+A+ S+ +HRD+ N L+ + KI DFGLAR
Sbjct: 155 AIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAKIGDFGLARD 213
Query: 151 IDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
I + NY +KG + + + APE + Y+ DVW+ E+ +
Sbjct: 214 I-MNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFS 261
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 67
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 125
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 183
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVC 209
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 38 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 95 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 149
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 150 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 68
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 126
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 184
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVC 210
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 95
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 153
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 211
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
+T LE I +G +G V + D+ T V +K I + + + + +E+++L + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYV 82
Query: 62 VRLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPL---KIKKYLHQILHGVA 114
+ + ++ E L DLL EP PL +I L +IL G+
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EP----GPLDETQIATILREILKGLD 133
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y HS++ +HRD+K AN L+ + VK+ADFG+A + G+ + APE ++
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VI 191
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXX 234
Y + D+W++ T E+ +R P P SE P
Sbjct: 192 KQSAYDSKADIWSLGITAIEL--------ARGEP------------PHSELHP-----MK 226
Query: 235 XXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P +P T+ G + + L +PS R TA+E L+H++
Sbjct: 227 VLFLIPKNNP----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 96 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 150
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 151 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 RYTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSS--VIREVSLLKE 55
+Y + ++ G +G+V+ R D+L V+K I + E +P+ V EV LLK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLKK 96
Query: 56 LKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKKYLHQILH 111
+ ++RLL+ DS L+ E + DL F+ TE + L + + Q+L
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RSFFWQVLE 154
Query: 112 GVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+ Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPE 212
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ + VW++ +MV
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 174
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 175 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 289
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 290 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 324
Query: 287 K 287
+
Sbjct: 325 Q 325
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 11 GRYGAVHRAHDSLTGDTV-VVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQS 69
G +G+V + + + V K+ + ++RE ++ +L + IVRL+ V
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-C 79
Query: 70 SVDSIDLVFENLDFDLLH-FM--KTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+++ LV E LH F+ K E N + + LHQ+ G+ Y + +HRDL
Sbjct: 80 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSN---VAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPV 183
N L+ ++ KI+DFGL++ + YT + L + APE + ++S+
Sbjct: 137 AARNVLL-VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRS 194
Query: 184 DVWAVACTFAEMVTH-QRLFHSRWAPGLLAAI 214
DVW+ T E +++ Q+ + P ++A I
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 53/300 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
++ LL+V+ +G +G V D + + ++ + +R E +L E+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
H IV+L + + L+ LDF DL + E T+ +K YL ++ +
Sbjct: 85 HPFIVKLHYAFQTEGKLYLI---LDFLRGGDLFTRLSKEVMFTEEDVKF--YLAELALAL 139
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR-PIDVPLENYTIKGGSLCYKAPER 172
+ HS I++RDLKP N L+D I K+ DFGL++ ID + Y+ G++ Y APE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHI-KLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEV 197
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSI-MGTPDSETLPXXXX 231
+ G ++ D W+ EM+T F + + I +G P
Sbjct: 198 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------- 248
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTA-----REALRHEYF 286
L P+ LLR + +P+ RL A E RH +F
Sbjct: 249 -----------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 48/301 (15%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH--E 59
Y++L+ I G V + + +K + + S E++ L +L+ +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
I+RL + + + I +V E + DL ++K + ++ +P + K Y +L V H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSI--DPWERKSYWKNMLEAVHTIHQH 174
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKAPERL--L 174
I+H DLKPANFLI ++K+ DFG+A + P +K G++ Y PE + +
Sbjct: 175 GIVHSDLKPANFLI--VDGMLKLIDFGIANQMQ-PDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 175 GSGRYS--------TPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
S R + DVW++ C M + F ++ + +I+
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ--IINQISKLHAIIDPNHEIEF 289
Query: 227 PXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYF 286
P P KDL D+L+ L DP +R++ E L H Y
Sbjct: 290 PDI--------------PEKDLQ-----------DVLKCCLKRDPKQRISIPELLAHPYV 324
Query: 287 K 287
+
Sbjct: 325 Q 325
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 71 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES-I 184
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMH 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 53/300 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
++ LL+V+ +G +G V D + + ++ + +R E +L E+
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
H IV+L + + L+ LDF DL + E T+ +K YL ++ +
Sbjct: 86 HPFIVKLHYAFQTEGKLYLI---LDFLRGGDLFTRLSKEVMFTEEDVKF--YLAELALAL 140
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR-PIDVPLENYTIKGGSLCYKAPER 172
+ HS I++RDLKP N L+D I K+ DFGL++ ID + Y+ G++ Y APE
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHI-KLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEV 198
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSI-MGTPDSETLPXXXX 231
+ G ++ D W+ EM+T F + + I +G P
Sbjct: 199 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------- 249
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTA-----REALRHEYF 286
L P+ LLR + +P+ RL A E RH +F
Sbjct: 250 -----------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 16 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 73 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 127
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 128 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N + ++D VKI DFG+ R D+
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXV--AEDFTVKIGDFGMTR--DIYET 178
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+Y KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 179 DYYRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 13 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 70 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 124
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 125 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 183
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELKH 58
+ LL+V+ +G +G V D+ + + ++ + +R E +L ++ H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGVA 114
+V+L + + L+ LDF DL + E T+ +K YL ++ G+
Sbjct: 90 PFVVKLHYAFQTEGKLYLI---LDFLRGGDLFTRLSKEVMFTEEDVKF--YLAELALGLD 144
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR-PIDVPLENYTIKGGSLCYKAPERL 173
+ HS I++RDLKP N L+D I K+ DFGL++ ID + Y+ G++ Y APE +
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHI-KLTDFGLSKEAIDHEKKAYSF-CGTVEYMAPEVV 202
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
G +S D W+ EM+T F +
Sbjct: 203 NRQG-HSHSADWWSYGVLMFEMLTGSLPFQGK 233
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 16 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 73 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 127
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 128 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 186
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
++ LL+V+ +G +G V D + + ++ + +R E +L E+
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
H IV+L + + L+ LDF DL + E T+ +K YL ++ +
Sbjct: 85 HPFIVKLHYAFQTEGKLYLI---LDFLRGGDLFTRLSKEVMFTEEDVKF--YLAELALAL 139
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLAR-PIDVPLENYTIKGGSLCYKAPER 172
+ HS I++RDLKP N L+D I K+ DFGL++ ID + Y+ G++ Y APE
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHI-KLTDFGLSKESIDHEKKAYSF-CGTVEYMAPEV 197
Query: 173 LLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIF-SIMGTPDSETLPXXXX 231
+ G ++ D W+ EM+T F + + I + +G P
Sbjct: 198 VNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------- 248
Query: 232 XXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTA-----REALRHEYF 286
L P+ LLR + +P+ RL A E RH +F
Sbjct: 249 -----------------------LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 140
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 141 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 198
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 199 TSASDVWSYGIVLWEVMSY 217
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 4 LLEVIRE-GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
E+I E G +G V++A + T +V+ I SE + E+ +L H NIV
Sbjct: 13 FWEIIGELGDFGKVYKAQNKET--SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHF----------MKTEPTVTKNPLKIKKYLHQILHG 112
+LL+ +EN + L+ F ++ E +T++ +++ Q L
Sbjct: 71 KLLDA--------FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--VCKQTLDA 120
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGL-ARPIDVPLENYTIKGGSLCYKAPE 171
+ Y H +I+HRDLK N L DI K+ADFG+ A+ ++ G+ + APE
Sbjct: 121 LNYLHDNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 172 RLLGSGR----YSTPVDVWAVACTFAEMV 196
++ Y DVW++ T EM
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T+ + I G +G V++ GD V VK + + P+ + EV +L++ +H NI+
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 63 RLLNVQSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ S+ + +V + + + LH ++T+ + +K+ Q G+ Y H+
Sbjct: 68 LFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEM----IKLIDIARQTAQGMDYLHA 122
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK--GGSLCYKAPE--RLL 174
+ I+HRDLK N + VKI DFGLA ++ + GS+ + APE R+
Sbjct: 123 KSIIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 181
Query: 175 GSGRYSTPVDVWAVACTFAEMVTHQ 199
YS DV+A E++T Q
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 157
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 158 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 215
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 216 TSASDVWSYGIVLWEVMSY 234
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 140
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 141 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 198
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 199 TSASDVWSYGIVLWEVMSY 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 76 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 132 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 189
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMH 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 73 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 129 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 186
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMH 210
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 167
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL+R + D P YT +GG + + +PE + ++
Sbjct: 168 HRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 225
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 226 TSASDVWSYGIVLWEVMSY 244
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 71 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 184
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMH 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 74 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 130 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 187
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMH 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 99 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 155 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 212
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMH 236
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 71 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 184
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMH 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 68 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 124 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 181
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMH 205
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGD---TVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+V+ G +G V L +V +K + + +E + E S++ + H NI+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 63 RLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEIL 122
RL V + + +V E ++ L + +++ L I G+ Y +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 123 HRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRY 179
HRDL N LI+ S + K++DFGL R + D P YT +GG + + +PE + ++
Sbjct: 170 HRDLAARNILIN-SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE-AIAYRKF 227
Query: 180 STPVDVWAVACTFAEMVTH 198
++ DVW+ E++++
Sbjct: 228 TSASDVWSYGIVLWEVMSY 246
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 7/197 (3%)
Query: 7 VIREGRYGAVHRAHDSLTG--DTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRL 64
VI G +G V L G D V K + +E + E S++ + H N+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 65 LNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHR 124
V + + +V E ++ L + +++ L I G+ Y +HR
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHR 169
Query: 125 DLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLC--YKAPERLLGSGRYST 181
DL N L++ S + K++DFGL+R I D P YT GG + + APE + ++++
Sbjct: 170 DLAARNILVN-SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR-KFTS 227
Query: 182 PVDVWAVACTFAEMVTH 198
DVW+ E++++
Sbjct: 228 ASDVWSYGIVMWEVMSY 244
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIXET 185
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 186 DXXRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT-EPTVTKNPL---- 100
+ E S++KE ++VRLL V S ++ E + DL ++++ P + NP+
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 101 ---KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLE 156
K+ + +I G+AY ++ + +HRDL N ++ ++D VKI DFG+ R D+
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--AEDFTVKIGDFGMTR--DIXET 176
Query: 157 NYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ KGG + + +PE L G ++T DVW+ E+ T
Sbjct: 177 DXXRKGGKGLLPVRWMSPES-LKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 120/307 (39%), Gaps = 41/307 (13%)
Query: 2 YTLLE-VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG-VPSSVIREVSLLKELK-H 58
Y L E V+ EG + V + +T VK I+ G + S V REV +L + + H
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVK---IIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFD--LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
N++ L+ D LVFE + L H K N L+ + + + +
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF---NELEASVVVQDVASALDFL 127
Query: 117 HSQEILHRDLKPANFLIDRSKDI--VKIADFGLA---------RPIDVPLENYTIKGGSL 165
H++ I HRDLKP N L + + VKI DFGL PI P GS
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP--ELLTPCGSA 185
Query: 166 CYKAPERLLG----SGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP 221
Y APE + + Y D+W++ +++ P + S G
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY--------PPFVGRCGSDCGWD 237
Query: 222 DSETLPXXXXXXXXXXXXPNRS-PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREA 280
E P P KD A + + DL+ ++L D +RL+A +
Sbjct: 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAK----DLISKLLVRDAKQRLSAAQV 293
Query: 281 LRHEYFK 287
L+H + +
Sbjct: 294 LQHPWVQ 300
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 4 LLEVIREGRYGAVHRAHDSLTG-----DTVVVKKIPIMNPSEGVPSSVIREVSLLK-ELK 57
+E + E R+G V++ H L G T V + + +EG R ++L+ L+
Sbjct: 13 FMEELGEDRFGKVYKGH--LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ 70
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLH---FMKT---------EPTVTKNPLKIKKY 105
H N+V LL V + + ++F LH M++ + K+ L+ +
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 106 LH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG 162
+H QI G+ Y S ++H+DL N L+ K VKI+D GL R + + Y + G
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREV-YAADYYKLLG 188
Query: 163 GSLC---YKAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
SL + APE ++ G++S D+W+ E+ ++
Sbjct: 189 NSLLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSY 226
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 116/297 (39%), Gaps = 51/297 (17%)
Query: 10 EGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HENIVRLLNVQ 68
EG + + + VK I S+ + ++ +E++ LK + H NIV+L V
Sbjct: 21 EGSFSICRKCVHKKSNQAFAVKII-----SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 69 SSVDSIDLVFENLDFDLL--------HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
LV E L+ L HF +TE + + +++ V++ H
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYI---------MRKLVSAVSHMHDVG 126
Query: 121 ILHRDLKPANFLIDRSKDI--VKIADFGLAR---PIDVPLENYTIKGGSLCYKAPERLLG 175
++HRDLKP N L D +KI DFG AR P + PL+ +L Y APE LL
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF---TLHYAAPE-LLN 182
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXX 235
Y D+W++ M++ Q F S + IM
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM----------------- 225
Query: 236 XXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEYFKDFQSL 292
+ + + DL++ +L +DP+KRL +E+ +D L
Sbjct: 226 --KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL 280
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ N S ++ E ++ +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENV---KIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ RLL + ++ LV + + + L E + + QI G++Y
Sbjct: 79 PYVSRLLGI-CLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED 137
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
++HRDL N L+ +S + VKI DFGLAR +D+ Y GG + K A E +L
Sbjct: 138 VRLVHRDLAARNVLV-KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL-R 195
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
R++ DVW+ T E++T
Sbjct: 196 RRFTHQSDVWSYGVTVWELMT 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ G+ + H + I++RDLKP N L+D + V+I+D GLA + G+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGT 352
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
+ APE LLG Y VD +A+ T EM+ + F +R
Sbjct: 353 PGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ G+ + H + I++RDLKP N L+D + V+I+D GLA + G+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGT 352
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
+ APE LLG Y VD +A+ T EM+ + F +R
Sbjct: 353 PGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 29/219 (13%)
Query: 4 LLEVIREGRYGAVHRAHDSLTG-----DTVVVKKIPIMNPSEGVPSSVIREVSLLK-ELK 57
+E + E R+G V++ H L G T V + + +EG R ++L+ L+
Sbjct: 30 FMEELGEDRFGKVYKGH--LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ 87
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLH---FMKT---------EPTVTKNPLKIKKY 105
H N+V LL V + + ++F LH M++ + K+ L+ +
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 106 LH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG 162
+H QI G+ Y S ++H+DL N L+ K VKI+D GL R + + Y + G
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLV-YDKLNVKISDLGLFREV-YAADYYKLLG 205
Query: 163 GSLC---YKAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
SL + APE ++ G++S D+W+ E+ ++
Sbjct: 206 NSLLPIRWMAPEAIM-YGKFSIDSDIWSYGVVLWEVFSY 243
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ G+ + H + I++RDLKP N L+D + V+I+D GLA + G+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGT 352
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
+ APE LLG Y VD +A+ T EM+ + F +R
Sbjct: 353 PGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 451 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ S D VK+ DFGL+R ++ KG + + APE +
Sbjct: 507 LESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 564
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMH 588
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 1 RYTLLEVIREGRYGAV--HRAHDSLTGDTVVVKKIPIMNPSEGVPS--SVIREVSLLKEL 56
R + + + G +G V A+ + D + + ++ PS + +++ E+ +L L
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 57 -KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM----------KTEPTV------TKN 98
H NIV LL + ++ E + DLL+F+ KT P + +
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ + +Q+ G+A+ S+ +HRDL N L+ + I KI DFGLAR I NY
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIKND-SNY 201
Query: 159 TIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+KG + + + APE + Y+ DVW+ E+ +
Sbjct: 202 VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFS 242
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ G+ + H + I++RDLKP N L+D + V+I+D GLA + G+
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYAGT 352
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
+ APE LLG Y VD +A+ T EM+ + F +R
Sbjct: 353 PGFMAPELLLGE-EYDFSVDYFALGVTLYEMIAARGPFRAR 392
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 20/170 (11%)
Query: 45 SVIREVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMK-------TEPT- 94
+++ E+ ++ L +HENIV LL + + ++ E + DLL+F++ T+P
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF 154
Query: 95 -VTKNPLKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARP 150
+ + + LH Q+ G+A+ S+ +HRD+ N L+ + KI DFGLAR
Sbjct: 155 AIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAKIGDFGLARD 213
Query: 151 IDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
I + NY +KG + + + APE + Y+ DVW+ E+ +
Sbjct: 214 I-MNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFS 261
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 2 YTLLEVIREGRYGAVH---RAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH 58
+ +L + G +G VH H+ V+KK ++ + ++ E +L + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN--DERLMLSIVTH 65
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
I+R+ I ++ + ++ L + + NP+ K Y ++ + Y HS
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA-KFYAAEVCLALEYLHS 124
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
++I++RDLKP N L+D++ I KI DFG A+ VP Y + G+ Y APE ++ +
Sbjct: 125 KDIIYRDLKPENILLDKNGHI-KITDFGFAKY--VPDVTYXL-CGTPDYIAPE-VVSTKP 179
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFH 203
Y+ +D W+ EM+ F+
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 11 GRYGAVHRAHDSLTGDTV-VVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNVQS 69
G +G+V + + + V K+ + ++RE ++ +L + IVRL+ V
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV-C 405
Query: 70 SVDSIDLVFENLDFDLLH-FM--KTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+++ LV E LH F+ K E N + + LHQ+ G+ Y + +HR+L
Sbjct: 406 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSN---VAELLHQVSMGMKYLEEKNFVHRNL 462
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPV 183
N L+ ++ KI+DFGL++ + YT + L + APE + ++S+
Sbjct: 463 AARNVLL-VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRS 520
Query: 184 DVWAVACTFAEMVTH-QRLFHSRWAPGLLAAI 214
DVW+ T E +++ Q+ + P ++A I
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 1 RYTLLEVIREGRYGAV--HRAHDSLTGDTVVVKKIPIMNPSEGVPS--SVIREVSLLKEL 56
R + + + G +G V A+ + D + + ++ PS + +++ E+ +L L
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 57 -KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM----------KTEPTV------TKN 98
H NIV LL + ++ E + DLL+F+ KT P + +
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ + +Q+ G+A+ S+ +HRDL N L+ + I KI DFGLAR I NY
Sbjct: 160 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIKND-SNY 217
Query: 159 TIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+KG + + + APE + Y+ DVW+ E+ +
Sbjct: 218 VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 1 RYTLLEVIREGRYGAV--HRAHDSLTGDTVVVKKIPIMNPSEGVPS--SVIREVSLLKEL 56
R + + + G +G V A+ + D + + ++ PS + +++ E+ +L L
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 101
Query: 57 -KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM----------KTEPTV------TKN 98
H NIV LL + ++ E + DLL+F+ KT P + +
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ + +Q+ G+A+ S+ +HRDL N L+ + I KI DFGLAR I NY
Sbjct: 162 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIKND-SNY 219
Query: 159 TIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+KG + + + APE + Y+ DVW+ E+ +
Sbjct: 220 VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFS 260
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 13/198 (6%)
Query: 10 EGRYGAVHRA-HDSL---TGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLL 65
+G +G+V +D L TG V VK++ P + RE+ +LK L + IV+
Sbjct: 17 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQILKALHSDFIVKYR 74
Query: 66 NVQSSVD--SIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
V + LV E L L + ++ Y QI G+ Y S+ +H
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 134
Query: 124 RDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGS-LCYKAPERLLGSGRYS 180
RDL N L++ S+ VKIADFGLA+ P+D G S + + APE L +S
Sbjct: 135 RDLAARNILVE-SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES-LSDNIFS 192
Query: 181 TPVDVWAVACTFAEMVTH 198
DVW+ E+ T+
Sbjct: 193 RQSDVWSFGVVLYELFTY 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 1 RYTLLEVIREGRYGAV--HRAHDSLTGDTVVVKKIPIMNPSEGVPS--SVIREVSLLKEL 56
R + + + G +G V A+ + D + + ++ PS + +++ E+ +L L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 57 -KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM----------KTEPTV------TKN 98
H NIV LL + ++ E + DLL+F+ KT P + +
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ + +Q+ G+A+ S+ +HRDL N L+ + I KI DFGLAR I NY
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARDIKND-SNY 224
Query: 159 TIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+KG + + + APE + Y+ DVW+ E+ +
Sbjct: 225 VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFS 265
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 29/179 (16%)
Query: 45 SVIREVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTE------PTVT 96
+++ E+ ++ L +HENIV LL + + ++ E + DLL+F++ + P++
Sbjct: 80 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLA 139
Query: 97 KN------------PLKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVK 141
PL+++ LH Q+ G+A+ S+ +HRD+ N L+ + K
Sbjct: 140 PGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAK 198
Query: 142 IADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
I DFGLAR I + NY +KG + + + APE + Y+ DVW+ E+ +
Sbjct: 199 IGDFGLARDI-MNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFS 255
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 71 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ + D VK+ DFGL+R ++ KG + + APE +
Sbjct: 127 LESKRFVHRDIAARNVLVS-ATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 184
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMH 208
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 28/222 (12%)
Query: 1 RYTLLEVIREGRYGAV--HRAHDSLTGDTVVVKKIPIMNPSEGVPS--SVIREVSLLKEL 56
R + + + G +G V A+ + D + + ++ PS + +++ E+ +L L
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 57 -KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM----------KTEPTV------TKN 98
H NIV LL + ++ E + DLL+F+ KT P + +
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ + +Q+ G+A+ S+ +HRDL N L+ + I KI DFGLAR I NY
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR-ITKICDFGLARHIKND-SNY 224
Query: 159 TIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+KG + + + APE + Y+ DVW+ E+ +
Sbjct: 225 VVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGIFLWELFS 265
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 7 VIREGRYGAVH------RAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
VI +G +G V+ +A + + + +I M E + +RE L++ L H N
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVE----AFLREGLLMRGLNHPN 83
Query: 61 IVRLLNVQSSVDSIDLVF--ENLDFDLLHFMKT---EPTVTKNPLKIKKYLHQILHGVAY 115
++ L+ + + + V DLL F+++ PTV + + Q+ G+ Y
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKD----LISFGLQVARGMEY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS-----LCYKAP 170
Q+ +HRDL N ++D S VK+ADFGLAR I + E Y+++ + + A
Sbjct: 140 LAEQKFVHRDLAARNCMLDESF-TVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTAL 197
Query: 171 ERLLGSGRYSTPVDVWAVACTFAEMVT 197
E L + R++T DVW+ E++T
Sbjct: 198 ES-LQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +K+ADFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIKVADFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +K+ADFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIKVADFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +K+ADFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIKVADFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 16/207 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH-EN 60
+ L+E++ G YG V++ TG +K + + E + +E+++LK+ H N
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRN 82
Query: 61 IVRLL------NVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGV 113
I N D + LV E + +K T I +IL G+
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERL 173
++ H +++HRD+K N L+ + + VK+ DFG++ +D + G+ + APE +
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAE-VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 174 LG----SGRYSTPVDVWAVACTFAEMV 196
Y D+W++ T EM
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 8/153 (5%)
Query: 49 EVSLLKELKH--ENIVRLLNVQSSVDSIDLVFENLD--FDLLHFMKTEPTVTKNPLKIKK 104
EV LLK++ ++RLL+ DS L+ E + DL F+ TE + L +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI-TERGALQEELA-RS 161
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
+ Q+L V +CH+ +LHRD+K N LID ++ +K+ DFG + + YT G+
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGT 219
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y PE + + VW++ +MV
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +K+ADFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIKVADFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 67
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 124
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+ LHRDL N L++ + +VK++DFGL+R V + YT GS + + PE L+ S
Sbjct: 125 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRY--VLDDEYTSSRGSKFPVRWSPPEVLMYS 181
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
++S+ D+WA E+ + ++ + R
Sbjct: 182 -KFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK---KIPIMNPSEGVPSSVIREVSLLKELKH 58
+ L +++ +G V R TGD +K I + P + +RE +LK+L H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD----VQMREFEVLKKLNH 66
Query: 59 ENIVRLLNVQSSVDSID--LVFENLDFDLLHFMKTEPTVTKN--PLKIKKYLHQILHGVA 114
+NIV+L ++ + L+ E L+ + EP+ + L ++ G+
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 115 YCHSQEILHRDLKPANFL---IDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ I+HR++KP N + + + + K+ DFG AR ++ E + G+ Y P+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVXLYGTEEYLHPD 185
Query: 172 -------RLLGSGRYSTPVDVWAVACTFAEMVT 197
R +Y VD+W++ TF T
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 1 RYTLLEVIREGRYGAVHRA-HDSLTGDTVVVKKIPIMN-PSEGVPSSVIREVSLLKELKH 58
R L I EG++G VH+ + S + V N S+ V ++E +++ H
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAY 115
+IV+L+ V + + V+ ++ L +++ V K L + Y +Q+ +AY
Sbjct: 451 PHIVKLIGVITE----NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG-SLCYKAPERLL 174
S+ +HRD+ N L+ + D VK+ DFGL+R ++ KG + + APE +
Sbjct: 507 LESKRFVHRDIAARNVLVS-ATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES-I 564
Query: 175 GSGRYSTPVDVWAVACTFAEMVTH 198
R+++ DVW E++ H
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMH 588
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 4 LLEVIREGRYGAVHRAH---DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
L +++ EG +G+V + + T V VK + + N S+ + E + +K+ H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 61 IVRLLNVQSSVDSIDL-----VFENLDFDLLH----FMKTEPTVTKNPLK-IKKYLHQIL 110
++RLL V + S + + + + LH + + E PL+ + K++ I
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 111 HGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAP 170
G+ Y ++ LHRDL N ++ R V +ADFGL++ I + G + K P
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCML-RDDMTVCVADFGLSKKI---YSGDYYRQGRIA-KMP 212
Query: 171 ERL-----LGSGRYSTPVDVWAVACTFAEMVT 197
+ L Y++ DVWA T E+ T
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
TLL+ + G++G V D V VK I + SE +E + +L H +V
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSE---DEFFQEAQTMMKLSHPKLV 66
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
+ V S I +V E + + LL+++++ + P ++ + + + G+A+ S +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLE-PSQLLEMCYDVCEGMAFLESHQF 125
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGR 178
+HRDL N L+DR VK++DFG+ R V + Y G+ + + APE + +
Sbjct: 126 IHRDLAARNCLVDRDL-CVKVSDFGMTRY--VLDDQYVSSVGTKFPVKWSAPE-VFHYFK 181
Query: 179 YSTPVDVWAVACTFAEMVT 197
YS+ DVWA E+ +
Sbjct: 182 YSSKSDVWAFGILMWEVFS 200
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 128/310 (41%), Gaps = 65/310 (20%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E I G Y R T VK I++ S+ P+ I LL+ +H NI
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVK---IIDKSKRDPTEEIE--ILLRYGQHPNI 78
Query: 62 VRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+ L +V + +V E + +LL + + ++ + L I V Y H+Q
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSER--EASAVLFTITKTVEYLHAQG 136
Query: 121 ILHRDLKPANFL-IDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYK----APERL 173
++HRDLKP+N L +D S + ++I DFG A+ + EN + + CY APE L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLLM--TPCYTANFVAPEVL 192
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
G Y D+W++ M+T ++ +A G
Sbjct: 193 ERQG-YDAACDIWSLGVLLYTMLTG----YTPFANG------------------------ 223
Query: 234 XXXXXXPNRSPIKDLATVVGG-----------LEPDGVDLLRRMLCLDPSKRLTAREALR 282
P+ +P + LA + G + DL+ +ML +DP +RLTA LR
Sbjct: 224 ------PDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277
Query: 283 HEYFKDFQSL 292
H + + L
Sbjct: 278 HPWIVHWDQL 287
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 73
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 130
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+ LHRDL N L++ + +VK++DFGL+R V + YT GS + + PE L+ S
Sbjct: 131 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
++S+ D+WA E+ + ++ + R
Sbjct: 188 -KFSSKSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 82
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 139
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+ LHRDL N L++ + +VK++DFGL+R V + YT GS + + PE L+ S
Sbjct: 140 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
++S+ D+WA E+ + ++ + R
Sbjct: 197 -KFSSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 67
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 124
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+ LHRDL N L++ + +VK++DFGL+R V + YT GS + + PE L+ S
Sbjct: 125 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
++S+ D+WA E+ + ++ + R
Sbjct: 182 -KFSSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 66
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 123
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+ LHRDL N L++ + +VK++DFGL+R V + YT GS + + PE L+ S
Sbjct: 124 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSR 205
++S+ D+WA E+ + ++ + R
Sbjct: 181 -KFSSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 82
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 139
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+ LHRDL N L++ + +VK++DFGL+R + E ++ +P +L ++
Sbjct: 140 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSR 205
S+ D+WA E+ + ++ + R
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LLEV GR+G V +A L + V VK PI + EV L +KHENI++
Sbjct: 28 LLEVKARGRFGCVWKAQ--LLNEYVAVKIFPIQDKQSWQNEY---EVYSLPGMKHENILQ 82
Query: 64 LLNVQSSVDSIDL------VFENLDFDLLHFMKTEPTVTKNPL--------KIKKYLHQI 109
+ + S+D+ F L F+K V+ N L + YLH+
Sbjct: 83 FIGAEKRGTSVDVDLWLITAFHE-KGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHED 140
Query: 110 LHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCY 167
+ G+ H I HRD+K N L+ ++ IADFGLA + G G+ Y
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLL-KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 168 KAPERLLGSGRYSTP----VDVWAVACTFAEMVT 197
APE L G+ + +D++A+ E+ +
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 3 TLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
T L+ + G++G V D V +K I + SE I E ++ L HE +V
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLV 62
Query: 63 RLLNVQSSVDSIDLVFENL-DFDLLHFMKT--EPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+L V + I ++ E + + LL++++ T+ L++ K + + Y S+
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK---DVCEAMEYLESK 119
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGS 176
+ LHRDL N L++ + +VK++DFGL+R V + YT GS + + PE L+ S
Sbjct: 120 QFLHRDLAARNCLVN-DQGVVKVSDFGLSRY--VLDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHSRWA 207
++S+ D+WA E+ + ++ + R+
Sbjct: 177 -KFSSKSDIWAFGVLMWEIYSLGKMPYERFT 206
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFGLA+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGLAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK---KIPIMNPSEGVPSSVIREVSLLKELKH 58
+ L +++ +G V R TGD +K I + P + +RE +LK+L H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD----VQMREFEVLKKLNH 66
Query: 59 ENIVRLLNVQSSVDSID--LVFENLDFDLLHFMKTEPTVTKN--PLKIKKYLHQILHGVA 114
+NIV+L ++ + L+ E L+ + EP+ + L ++ G+
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 115 YCHSQEILHRDLKPANFLI---DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPE 171
+ I+HR++KP N + + + + K+ DFG AR ++ E + G+ Y P+
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYLHPD 185
Query: 172 -------RLLGSGRYSTPVDVWAVACTFAEMVT 197
R +Y VD+W++ TF T
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 119/307 (38%), Gaps = 41/307 (13%)
Query: 2 YTLLE-VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG-VPSSVIREVSLLKELK-H 58
Y L E V+ EG + V + +T VK I+ G + S V REV +L + + H
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVK---IIEKQPGHIRSRVFREVEMLYQCQGH 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFD--LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
N++ L+ D LVFE + L H K N L+ + + + +
Sbjct: 71 RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF---NELEASVVVQDVASALDFL 127
Query: 117 HSQEILHRDLKPANFLIDRSKDI--VKIADF---------GLARPIDVPLENYTIKGGSL 165
H++ I HRDLKP N L + + VKI DF G PI P GS
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP--ELLTPCGSA 185
Query: 166 CYKAPERLLG----SGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP 221
Y APE + + Y D+W++ +++ P + S G
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG--------YPPFVGRCGSDCGWD 237
Query: 222 DSETLPXXXXXXXXXXXXPNRS-PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREA 280
E P P KD A + + DL+ ++L D +RL+A +
Sbjct: 238 RGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAK----DLISKLLVRDAKQRLSAAQV 293
Query: 281 LRHEYFK 287
L+H + +
Sbjct: 294 LQHPWVQ 300
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 22/172 (12%)
Query: 45 SVIREVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDF-DLLHFM--KTEPTV----- 95
+++ E+ ++ L +HENIV LL + + ++ E + DLL+F+ K P +
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYN 154
Query: 96 -TKNP---LKIKKYLH---QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLA 148
+ NP L + LH Q+ G+A+ S+ +HRD+ N L+ + KI DFGLA
Sbjct: 155 PSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH-VAKIGDFGLA 213
Query: 149 RPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
R I + NY +KG + + + APE + Y+ DVW+ E+ +
Sbjct: 214 RDI-MNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGILLWEIFS 263
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ V +T+ G+
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK--RVKGRTWTL-CGT 202
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y APE +L G Y+ VD WA+ EM
Sbjct: 203 PEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I G +G V++ GD V VK + +++P+ + EV++L++ +H NI+ +
Sbjct: 44 IGSGSFGTVYKG--KWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 68 QSSVDSIDLVFENLD----FDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
+ D++ +V + + + LH +T+ + ++ Q G+ Y H++ I+H
Sbjct: 101 MTK-DNLAIVTQWCEGSSLYKHLHVQETKFQM----FQLIDIARQTAQGMDYLHAKNIIH 155
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPE--RLLGSGRY 179
RD+K N + VKI DFGLA + ++ GS+ + APE R+ + +
Sbjct: 156 RDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 180 STPVDVWAVACTFAEMVT 197
S DV++ E++T
Sbjct: 215 SFQSDVYSYGIVLYELMT 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ V +T+ G+
Sbjct: 132 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK--RVKGRTWTL-CGT 187
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y APE +L G Y+ VD WA+ EM
Sbjct: 188 PEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 20/195 (10%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK--ELKHENIVRLLNVQ 68
G +G VHR D TG VKK+ + V R L+ L IV L
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRL---------EVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 69 SSVDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+++ E L+ L +K + + ++ + YL Q L G+ Y HS+ ILH D+K
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPED--RALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 128 PANFLIDRSKDIVKIADFGLARPIDV-PLENYTIKG----GSLCYKAPERLLGSGRYSTP 182
N L+ + DFG A + L + G G+ + APE +LG
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR-SCDAK 271
Query: 183 VDVWAVACTFAEMVT 197
VDVW+ C M+
Sbjct: 272 VDVWSSCCMMLHMLN 286
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGG- 163
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGAT 216
Query: 164 -SLC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+LC Y APE +L G Y+ VD WA+ EM
Sbjct: 217 WTLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 254
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 143/368 (38%), Gaps = 92/368 (25%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH-- 58
RY ++ + G + V + D + G V K+ + +E + + E+ LLK +++
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWD-IQGKKFVAMKV--VKSAEHYTETALDEIRLLKSVRNSD 78
Query: 59 ------ENIVRLLN--VQSSVDS--IDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLH 107
E +V+LL+ S V+ I +VFE L LL ++ + PL +KK +
Sbjct: 79 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI-IKSNYQGLPLPCVKKIIQ 137
Query: 108 QILHGVAYCHSQ-EILHRDLKPANFLI--------------------------------- 133
Q+L G+ Y H++ I+H D+KP N L+
Sbjct: 138 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 197
Query: 134 ---------------DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+ K VKIAD G A + +++T + Y++ E L+GSG
Sbjct: 198 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG- 253
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGL------LAAIFSIMGTPDSETLPXXXXX 232
Y+TP D+W+ AC E+ T LF +A I ++G + +
Sbjct: 254 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 313
Query: 233 XXXXXXXPNRSPIKDLATVVGGL-------------EPDG-VDLLRRMLCLDPSKRLTAR 278
+ I L GL E G D L ML L P KR TA
Sbjct: 314 KEFFTKKGDLKHITKLKP--WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAA 371
Query: 279 EALRHEYF 286
E LRH +
Sbjct: 372 ECLRHPWL 379
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 24/197 (12%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK--ELKHENIVRLLNVQ 68
G +G VHR D TG VKK+ + V R L+ L IV L
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRL---------EVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 69 SSVDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+++ E L+ L +K + + ++ + YL Q L G+ Y HS+ ILH D+K
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPED--RALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 128 PANFLIDRSKDIVKIADFGLARPI-------DVPLENYTIKGGSLCYKAPERLLGSGRYS 180
N L+ + DFG A + D+ +Y G+ + APE +LG
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIP--GTETHMAPEVVLGR-SCD 250
Query: 181 TPVDVWAVACTFAEMVT 197
VDVW+ C M+
Sbjct: 251 AKVDVWSSCCMMLHMLN 267
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 143/368 (38%), Gaps = 92/368 (25%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH-- 58
RY ++ + G + V + D + G V K+ + +E + + E+ LLK +++
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWD-IQGKKFVAMKV--VKSAEHYTETALDEIRLLKSVRNSD 94
Query: 59 ------ENIVRLLN--VQSSVDS--IDLVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLH 107
E +V+LL+ S V+ I +VFE L LL ++ + PL +KK +
Sbjct: 95 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI-IKSNYQGLPLPCVKKIIQ 153
Query: 108 QILHGVAYCHSQ-EILHRDLKPANFLI--------------------------------- 133
Q+L G+ Y H++ I+H D+KP N L+
Sbjct: 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 213
Query: 134 ---------------DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+ K VKIAD G A + +++T + Y++ E L+GSG
Sbjct: 214 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG- 269
Query: 179 YSTPVDVWAVACTFAEMVTHQRLFHSRWAPGL------LAAIFSIMGTPDSETLPXXXXX 232
Y+TP D+W+ AC E+ T LF +A I ++G + +
Sbjct: 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 329
Query: 233 XXXXXXXPNRSPIKDLATVVGGL-------------EPDG-VDLLRRMLCLDPSKRLTAR 278
+ I L GL E G D L ML L P KR TA
Sbjct: 330 KEFFTKKGDLKHITKLKP--WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAA 387
Query: 279 EALRHEYF 286
E LRH +
Sbjct: 388 ECLRHPWL 395
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ V + + G+
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK--RVKGRTWXL-AGT 201
Query: 165 LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y APE +L G Y+ VD WA+ EM
Sbjct: 202 PEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +K+ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIKVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +++ DFGLA+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIQVTDFGLAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 141 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 190
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 191 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 228
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 188
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 189 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 226
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 11/203 (5%)
Query: 7 VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
++ G +G V++ L T+V K +G EV ++ H N++RL
Sbjct: 45 ILGRGGFGKVYKGR--LADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRG 102
Query: 67 VQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL---HGVAYCHSQ---E 120
+ LV+ + + E ++ PL K L G+AY H +
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK-GGSLCYKAPERLLGSGRY 179
I+HRD+K AN L+D + V + DFGLA+ +D + G++ + APE L +G+
Sbjct: 163 IIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE-YLSTGKS 220
Query: 180 STPVDVWAVACTFAEMVTHQRLF 202
S DV+ E++T QR F
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAF 243
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 106/253 (41%), Gaps = 45/253 (17%)
Query: 48 REVSLLKEL-KHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKN----PLKI 102
REV LL+E +H N++R + D F+ + +L E K+ L+
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEK-----DRQFQYIAIELCAATLQEYVEQKDFAHLGLEP 120
Query: 103 KKYLHQILHGVAYCHSQEILHRDLKPANFLID----RSKDIVKIADFGLARPIDVPLENY 158
L Q G+A+ HS I+HRDLKP N LI K I+DFGL + + V ++
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 159 TIKG---GSLCYKAPERLLGSGRY--STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAA 213
+ + G+ + APE L + + VD+++ C F +++ + L
Sbjct: 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS---HPFGKSLQRQ 237
Query: 214 IFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLCLDPSK 273
++G + L P K + +L+ +M+ +DP K
Sbjct: 238 ANILLGACSLDCL----------------HPEKHEDVI-------ARELIEKMIAMDPQK 274
Query: 274 RLTAREALRHEYF 286
R +A+ L+H +F
Sbjct: 275 RPSAKHVLKHPFF 287
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 139 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 188
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 189 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 226
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 163 ----GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLXGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 147 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 196
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 197 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 6 EVIREGRYGAVHRAHDSLTGDT-----VVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
EVI G +G V+ H +L + VK + + G S + E ++K+ H N
Sbjct: 54 EVIGRGHFGCVY--HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPN 110
Query: 61 IVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGVA 114
++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 111 VLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMK 165
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y S++ +HRDL N ++D K VK+ADFGLAR D+ + Y K P + +
Sbjct: 166 YLASKKFVHRDLAARNCMLDE-KFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 222
Query: 175 G-----SGRYSTPVDVWAVACTFAEMVT 197
+ +++T DVW+ E++T
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 7 VIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLN 66
++ G +G V++ + G V VK++ ++G EV ++ H N++RL
Sbjct: 37 ILGRGGFGKVYKGRLA-DGXLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRG 94
Query: 67 VQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQIL---HGVAYCHSQ---E 120
+ LV+ + + E ++ PL K L G+AY H +
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154
Query: 121 ILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK-GGSLCYKAPERLLGSGRY 179
I+HRD+K AN L+D + V + DFGLA+ +D + G + + APE L +G+
Sbjct: 155 IIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE-YLSTGKS 212
Query: 180 STPVDVWAVACTFAEMVTHQRLF 202
S DV+ E++T QR F
Sbjct: 213 SEKTDVFGYGVMLLELITGQRAF 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 33 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 89 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 143
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 144 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 198
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LL+ I +G +G V G+ V VK I ++ + + E S++ +L+H N+V+
Sbjct: 25 LLQTIGKGEFGDVMLG--DYRGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQ 78
Query: 64 LLNV-QSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
LL V + +V E + L+ ++++ + K+ + + Y
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
+HRDL N L+ ++ K++DFGL + + + + + APE L ++ST
Sbjct: 139 VHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL---PVKWTAPEALR-EKKFST 193
Query: 182 PVDVWAVACTFAEMVTHQRLFHSR 205
DVW+ E+ + R+ + R
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 36 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 92 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 146
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 147 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 201
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 34 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 90 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 144
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 145 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 199
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 216
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 217 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 28 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 84 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 138
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 139 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 193
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 6 EVIREGRYGAVHRAHDSLTGDT-----VVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
EVI G +G V+ H +L + VK + + G S + E ++K+ H N
Sbjct: 55 EVIGRGHFGCVY--HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPN 111
Query: 61 IVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGVA 114
++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 112 VLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMK 166
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLL 174
Y S++ +HRDL N ++D K VK+ADFGLAR D+ + Y K P + +
Sbjct: 167 YLASKKFVHRDLAARNCMLDE-KFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 223
Query: 175 G-----SGRYSTPVDVWAVACTFAEMVT 197
+ +++T DVW+ E++T
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ + V+ +G +G V A TGD VK K ++ + V ++ + L H
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
+ +L + D + V E ++ L F + + + + + Y +I+ + + H +
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMF-HIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
I++RDLK N L+D K+ADFG+ + G+ Y APE +L Y
Sbjct: 144 GIIYRDLKLDNVLLDHEGH-CKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQEMLY 201
Query: 180 STPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
VD WA+ EM+ F + L AI +
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 167 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 216
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 217 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKY 105
+ E S++ + H NI+RL V + +V E ++ L F++T +++
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGM 156
Query: 106 LHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGS 164
L + G+ Y +HRDL N L+D S + K++DFGL+R + D P YT GG
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 165 LC--YKAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
+ + APE + +S+ DVW+ E++ +
Sbjct: 216 IPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLAY 250
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 116/302 (38%), Gaps = 40/302 (13%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEG-VPSSVIREVSLLKELK-HENIVR 63
E++ EG Y V A G VK I+ G S V REV L + + ++NI+
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVK---IIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 64 LLNVQSSVDSIDLVFENLDFD--LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
L+ LVFE L L H K + N + + + + + + H++ I
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHF---NEREASRVVRDVAAALDFLHTKGI 132
Query: 122 LHRDLKPANFLIDRSKDI--VKIADFGLAR---------PIDVPLENYTIKGGSLCYKAP 170
HRDLKP N L + + + VKI DF L PI P T GS Y AP
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP--ELTTPCGSAEYMAP 190
Query: 171 ERLL----GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETL 226
E + + Y D+W++ M++ P + + G E
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG--------YPPFVGHCGADCGWDRGEVC 242
Query: 227 PXXXXXXXXXXXXPNRS-PIKDLATVVGGLEPDGVDLLRRMLCLDPSKRLTAREALRHEY 285
P KD A + + DL+ ++L D +RL+A + L+H +
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHI----SSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
Query: 286 FK 287
+
Sbjct: 299 VQ 300
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 35 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 91 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 145
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 146 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 200
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 36 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 92 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 146
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 147 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 201
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID + +++ DFG A+ +KG +
Sbjct: 133 YAAQIVLTFEYLHSLDLIYRDLKPENLLID-EQGYIQVTDFGFAK---------RVKGRT 182
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 183 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 65
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 123
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 181
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLFH 203
Y VD W + EM+ H+RLF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 31 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 87 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 141
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI--KGGSLCYKAPE 171
Y S++ +HRDL N ++D K VK+ADFGLAR + E Y++ K G+ K P
Sbjct: 142 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDM-YDKEYYSVHNKTGA---KLPV 196
Query: 172 RLLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + + +++T DVW+ E++T
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 35 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 91 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 145
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI----DVPLENYTIKGGSLCYKA 169
Y S++ +HRDL N ++D K VK+ADFGLAR + + N T + + A
Sbjct: 146 KYLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVT 197
E L + +++T DVW+ E++T
Sbjct: 205 LES-LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LL+ I +G +G V G+ V VK I ++ + + E S++ +L+H N+V+
Sbjct: 16 LLQTIGKGEFGDVMLG--DYRGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQ 69
Query: 64 LLNV-QSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
LL V + +V E + L+ ++++ + K+ + + Y
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 129
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
+HRDL N L+ ++ K++DFGL + + + + + APE L + +ST
Sbjct: 130 VHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL---PVKWTAPEALREAA-FST 184
Query: 182 PVDVWAVACTFAEMVTHQRLFHSR 205
DVW+ E+ + R+ + R
Sbjct: 185 KSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LL+ I +G +G V G+ V VK I ++ + + E S++ +L+H N+V+
Sbjct: 10 LLQTIGKGEFGDVMLG--DYRGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQ 63
Query: 64 LLNV-QSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
LL V + +V E + L+ ++++ + K+ + + Y
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 123
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
+HRDL N L+ ++ K++DFGL + + + + + APE L ++ST
Sbjct: 124 VHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL---PVKWTAPEALR-EKKFST 178
Query: 182 PVDVWAVACTFAEMVTHQRLFHSR 205
DVW+ E+ + R+ + R
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 68
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 126
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 127 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 184
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLF 202
Y VD W + EM+ H+RLF
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 65
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 123
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKTFCGTPEYLAPE-VLEDND 181
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLF 202
Y VD W + EM+ H+RLF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 70
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 128
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 129 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 186
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLFH 203
Y VD W + EM+ H+RLF
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LL+ I +G +G V G+ V VK I ++ + + E S++ +L+H N+V+
Sbjct: 197 LLQTIGKGEFGDVMLG--DYRGNKVAVKCIK----NDATAQAFLAEASVMTQLRHSNLVQ 250
Query: 64 LLNV-QSSVDSIDLVFENL-DFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
LL V + +V E + L+ ++++ + K+ + + Y
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 310
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
+HRDL N L+ ++ K++DFGL + + + + + APE L ++ST
Sbjct: 311 VHRDLAARNVLVSED-NVAKVSDFGLTKEASSTQDTGKL---PVKWTAPEALR-EKKFST 365
Query: 182 PVDVWAVACTFAEMVTHQRLFHSR 205
DVW+ E+ + R+ + R
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 65
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 123
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLFH 203
Y VD W + EM+ H+RLF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 65
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 123
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLF 202
Y VD W + EM+ H+RLF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 37 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 93 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 147
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARP-IDVPLENYTIKGGSLCYKAPER 172
+ S++ +HRDL N ++D K VK+ADFGLAR +D ++ K G+ K P +
Sbjct: 148 KFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMLDKEFDSVHNKTGA---KLPVK 203
Query: 173 LLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK--KIPIMNPSEGVPSSVIREVSLLKELKHE 59
+ L+++ +G +G V + TG +K + ++ + V +V E +L+ +H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-ESRVLQNTRHP 65
Query: 60 NIVRLLNVQSSVDSIDLVFENLDFDLLHF-MKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
+ L + D + V E + L F + E T+ + + Y +I+ + Y HS
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE--RARFYGAEIVSALEYLHS 123
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR 178
+++++RD+K N ++D+ I KI DFGL + G+ Y APE +L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGATMKXFCGTPEYLAPE-VLEDND 181
Query: 179 YSTPVDVWAVACTFAEMVT---------HQRLF 202
Y VD W + EM+ H+RLF
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 36 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 92 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 146
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPER 172
+ S++ +HRDL N ++D K VK+ADFGLAR + D ++ K G+ K P +
Sbjct: 147 KFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGA---KLPVK 202
Query: 173 LLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 37 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 93 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 147
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPER 172
+ S++ +HRDL N ++D K VK+ADFGLAR + D ++ K G+ K P +
Sbjct: 148 KFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGA---KLPVK 203
Query: 173 LLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 36 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 92 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 146
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPER 172
+ S++ +HRDL N ++D K VK+ADFGLAR + D ++ K G+ K P +
Sbjct: 147 KFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGA---KLPVK 202
Query: 173 LLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 34 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 90 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 144
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPER 172
+ S++ +HRDL N ++D K VK+ADFGLAR + D ++ K G+ K P +
Sbjct: 145 KFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGA---KLPVK 200
Query: 173 LLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLMIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 6 EVIREGRYGAVHRAHDSLTGDT-----VVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
EVI G +G V+ H +L + VK + + G S + E ++K+ H N
Sbjct: 95 EVIGRGHFGCVY--HGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPN 151
Query: 61 IVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGVA 114
++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 152 VLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMK 206
Query: 115 YCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERL 173
+ S++ +HRDL N ++D K VK+ADFGLAR + D ++ K G+ K P +
Sbjct: 207 FLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGA---KLPVKW 262
Query: 174 LG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 263 MALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 33/230 (14%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK-HE 59
R + V+ EG + V+ A D +G +K++ ++ E ++I+EV +K+L H
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHP 86
Query: 60 NIVRLLNVQS--------SVDSIDLVFENLDFDLLHFMKTEPTVTKNPLK---IKKYLHQ 108
NIV+ + S L+ E L+ F+K ++ PL + K +Q
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK--MESRGPLSCDTVLKIFYQ 144
Query: 109 ILHGVAYCHSQE--ILHRDLKPANFLIDRSKDIVKIADFGLARPID------------VP 154
V + H Q+ I+HRDLK N L+ ++ +K+ DFG A I
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 155 LENYTIKGGSLCYKAPE--RLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
+E + + Y+ PE L + D+WA+ C + Q F
Sbjct: 204 VEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 31/210 (14%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSE------GVPSSVIREVSLLKELKHE 59
EVI G +G V+ H +L + KKI S G S + E ++K+ H
Sbjct: 41 EVIGRGHFGCVY--HGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 60 NIVRLLNVQSSVDSIDLVFENLDF----DLLHFMKTEPTVTKNPL--KIKKYLHQILHGV 113
N++ LL + + LV L + DL +F++ E T NP + + Q+ G+
Sbjct: 97 NVLSLLGICLRSEGSPLVV--LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGM 151
Query: 114 AYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPER 172
+ S++ +HRDL N ++D K VK+ADFGLAR + D ++ K G+ K P +
Sbjct: 152 KFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSVHNKTGA---KLPVK 207
Query: 173 LLG-----SGRYSTPVDVWAVACTFAEMVT 197
+ + +++T DVW+ E++T
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE +L G Y+ VD WA+ +M
Sbjct: 196 WXLCGTPEYLAPEIILSKG-YNKAVDWWALGVLIYQMAA 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNP--SEGVPSSVIREVSLLKELKHENIVR 63
+VI G +G V H L G + I + +E + E S++ + H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 64 LLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
L V + + ++ E ++ L + +++ L I G+ Y +H
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 158
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGS---LCYKAPERLLGSGR 178
RDL N L++ S + K++DFGL+R + D YT G + + APE + +
Sbjct: 159 RDLAARNILVN-SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-K 216
Query: 179 YSTPVDVWAVACTFAEMVTH 198
+++ DVW+ E++++
Sbjct: 217 FTSASDVWSYGIVMWEVMSY 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 81 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 140 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMT 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 77 PHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 136 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 195 -IYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 76 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 135 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 78 PHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 137 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 196 -IYTHQSDVWSYGVTVWELMT 215
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N +ID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLIIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y APE ++ G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPEIIISKG-YNKAVDWWALGVLIYEMAA 233
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 76
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 77 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 136 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 195 LHR-IYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 77
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 78 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 137 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 196 LHR-IYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 78 PHVCRLLGI-CLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 137 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 196 -IYTHQSDVWSYGVTVWELMT 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
RY L E++ G VH A D V VK + + PS +R E L
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALN 70
Query: 58 HENIVRLLNVQSSVDSID----LVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H IV + + + +V E +D L + TE +T P + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQA 128
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKA 169
+ + H I+HRD+KPAN +I + + VK+ DFG+AR I + T G+ Y +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
PE+ G DV+++ C E++T + F
Sbjct: 188 PEQARGDS-VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
RY L E++ G VH A D V VK + + PS +R E L
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALN 70
Query: 58 HENIVRLLNVQSSVDSID----LVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H IV + + + +V E +D L + TE +T P + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQA 128
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKA 169
+ + H I+HRD+KPAN +I + + VK+ DFG+AR I + T G+ Y +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
PE+ G DV+++ C E++T + F
Sbjct: 188 PEQARGDS-VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
RY L E++ G VH A D V VK + + PS +R E L
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALN 70
Query: 58 HENIVRLLNVQSSVDSID----LVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H IV + + + +V E +D L + TE +T P + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQA 128
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKA 169
+ + H I+HRD+KPAN +I + + VK+ DFG+AR I + T G+ Y +
Sbjct: 129 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
PE+ G DV+++ C E++T + F
Sbjct: 188 PEQARGDS-VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 81 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 140 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMT 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 17/213 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
RY L E++ G VH A D V VK + + PS +R E L
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALN 87
Query: 58 HENIVRLLNVQSSVDSID----LVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H IV + + + +V E +D L + TE +T P + + +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQA 145
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKA 169
+ + H I+HRD+KPAN +I + + VK+ DFG+AR I + T G+ Y +
Sbjct: 146 LNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
PE+ G DV+++ C E++T + F
Sbjct: 205 PEQARGDS-VDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 20 IKVLSSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 77 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 136 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 195 -IYTHQSDVWSYGVTVWELMT 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIP--IMNPSEGVP----SSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP IM E ++ E ++ + +
Sbjct: 54 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 111 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 170 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 229 -IYTHQSDVWSYGVTVWELMT 248
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LC----YKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC Y AP +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEYLAPAIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 17 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 74 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 133 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 192 -IYTHQSDVWSYGVTVWELMT 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 6 EVIREGRYGAVHRAHDSLTG--DTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
EVI G +G V R G ++ V K +E + E S++ + +H NI+R
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 64 LLNVQSSVDSIDLV---FENLDFD-LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
L V ++ + ++ EN D L + TV +++ L I G+ Y
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAEM 137
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDV----PLENYTIKGG-SLCYKAPERLL 174
+HRDL N L++ S + K++DFGL+R ++ P E ++ G + + APE +
Sbjct: 138 SYVHRDLAARNILVN-SNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE-AI 195
Query: 175 GSGRYSTPVDVWAVACTFAEMVT 197
++++ D W+ E+++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 76
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 77 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 136 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 195 LHR-IYTHQSDVWSYGVTVWELMT 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 125/310 (40%), Gaps = 65/310 (20%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENI 61
Y + E I G Y R T VK I++ S+ P+ I LL+ +H NI
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVK---IIDKSKRDPTEEIE--ILLRYGQHPNI 78
Query: 62 VRLLNVQSSVDSIDLVFE-NLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE 120
+ L +V + +V E +LL + + ++ + L I V Y H+Q
Sbjct: 79 ITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSER--EASAVLFTITKTVEYLHAQG 136
Query: 121 ILHRDLKPANFL-IDRSKD--IVKIADFGLARPIDVPLENYTIKGGSLCYK----APERL 173
++HRDLKP+N L +D S + ++I DFG A+ + EN + + CY APE L
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA--ENGLLX--TPCYTANFVAPEVL 192
Query: 174 LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXX 233
G Y D+W++ +T ++ +A G
Sbjct: 193 ERQG-YDAACDIWSLGVLLYTXLTG----YTPFANG------------------------ 223
Query: 234 XXXXXXPNRSPIKDLATVVGG-----------LEPDGVDLLRRMLCLDPSKRLTAREALR 282
P+ +P + LA + G + DL+ + L +DP +RLTA LR
Sbjct: 224 ------PDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLR 277
Query: 283 HEYFKDFQSL 292
H + + L
Sbjct: 278 HPWIVHWDQL 287
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 77 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 136 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 195 -IYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 81 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 140 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMT 221
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 20/198 (10%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR--EVSLLKELKHENIVRLL 65
+ G +G VHR D TG VKK+ + V R E+ L IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRL---------EVFRVEELVACAGLSSPRIVPLY 116
Query: 66 NVQSSVDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHR 124
+++ E L+ L +K + ++ + YL Q L G+ Y H++ ILH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED--RALYYLGQALEGLEYLHTRRILHG 174
Query: 125 DLKPANFLIDRSKDIVKIADFGLARPIDV-PLENYTIKG----GSLCYKAPERLLGSGRY 179
D+K N L+ + DFG A + L + G G+ + APE ++G
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK-PC 233
Query: 180 STPVDVWAVACTFAEMVT 197
VD+W+ C M+
Sbjct: 234 DAKVDIWSSCCMMLHMLN 251
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 74 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 133 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMT 214
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDXXK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 83
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 84 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 143 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 202 LHR-IYTHQSDVWSYGVTVWELMT 224
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLL----KELK 57
+ L + G YG V + G VK+ M+P G P R+++ + K +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRS--MSPFRG-PKDRARKLAEVGSHEKVGQ 115
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
H VRL + L E L + + ++ YL L +A+ H
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLH 174
Query: 118 SQEILHRDLKPAN-FLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
SQ ++H D+KPAN FL R + K+ DFGL + ++ G Y APE L GS
Sbjct: 175 SQGLVHLDVKPANIFLGPRGR--CKLGDFGLLVELGTAGAG-EVQEGDPRYMAPELLQGS 231
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLFHS 204
Y T DV+++ T E+ + L H
Sbjct: 232 --YGTAADVFSLGLTILEVACNMELPHG 257
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 79 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 138 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 197 -IYTHQSDVWSYGVTVWELMT 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 79
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 80 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +
Sbjct: 139 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 198 LHR-IYTHQSDVWSYGVTVWELMT 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 14 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 71 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 130 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 189 -IYTHQSDVWSYGVTVWELMT 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 80 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 139 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 198 -IYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 77 PHVCRLLGI-CLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 136 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 195 -IYTHQSDVWSYGVTVWELMT 214
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 80/195 (41%), Gaps = 20/195 (10%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR--EVSLLKELKHENIVRLLNVQ 68
G +G VHR D TG VKK+ + V R E+ L IV L
Sbjct: 83 GSFGEVHRMKDKQTGFQCAVKKVRL---------EVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 69 SSVDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDLK 127
+++ E L+ L +K + ++ + YL Q L G+ Y H++ ILH D+K
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPED--RALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 128 PANFLIDRSKDIVKIADFGLARPIDV-PLENYTIKG----GSLCYKAPERLLGSGRYSTP 182
N L+ + DFG A + L + G G+ + APE ++G
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK-PCDAK 250
Query: 183 VDVWAVACTFAEMVT 197
VD+W+ C M+
Sbjct: 251 VDIWSSCCMMLHMLN 265
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 80 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 139 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 198 -IYTHQSDVWSYGVTVWELMT 217
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 20/198 (10%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR--EVSLLKELKHENIVRLL 65
+ G +G VHR D TG VKK+ + V R E+ L IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRL---------EVFRVEELVACAGLSSPRIVPLY 132
Query: 66 NVQSSVDSIDLVFENLDFDLL-HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHR 124
+++ E L+ L +K + ++ + YL Q L G+ Y H++ ILH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED--RALYYLGQALEGLEYLHTRRILHG 190
Query: 125 DLKPANFLIDRSKDIVKIADFGLARPIDV-PLENYTIKG----GSLCYKAPERLLGSGRY 179
D+K N L+ + DFG A + L + G G+ + APE ++G
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK-PC 249
Query: 180 STPVDVWAVACTFAEMVT 197
VD+W+ C M+
Sbjct: 250 DAKVDIWSSCCMMLHMLN 267
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDXXK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKELKH 58
++V+ G +G V++ G+ V KIP+ S ++ E ++ + +
Sbjct: 45 IKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHS 118
++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 102 PHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 119 QEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERLLGS 176
+ ++HRDL N L+ ++ VKI DFGLA+ + + Y +GG + K A E +L
Sbjct: 161 RRLVHRDLAARNVLV-KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 177 GRYSTPVDVWAVACTFAEMVT 197
Y+ DVW+ T E++T
Sbjct: 220 -IYTHQSDVWSYGVTVWELMT 239
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 142/366 (38%), Gaps = 88/366 (24%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
RY ++ + G + V D + G V K+ + ++ + + E+ LLK ++ +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWD-MQGKRFVAMKV--VKSAQHYTETALDEIKLLKCVRESD 88
Query: 61 --------IVRLLN--VQSSVDSID--LVFENLDFDLLHFMKTEPTVTKNPLK-IKKYLH 107
+V+L++ S ++ I +VFE L LL ++ + P++ +K +
Sbjct: 89 PSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWI-IKSNYQGLPVRCVKSIIR 147
Query: 108 QILHGVAYCHSQ-EILHRDLKPANFLI--------------------------------- 133
Q+L G+ Y HS+ +I+H D+KP N L+
Sbjct: 148 QVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTA 207
Query: 134 -------------DRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYS 180
+ K VKIAD G A + +++T + Y++ E L+G+G YS
Sbjct: 208 PAADLLVNPLDPRNADKIRVKIADLGNACWVH---KHFTEDIQTRQYRSIEVLIGAG-YS 263
Query: 181 TPVDVWAVACTFAEMVTHQRLF-------------HSRWAPGLLAAI---FSIMGTPDSE 224
TP D+W+ AC E+ T LF H LL +I F++ G E
Sbjct: 264 TPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSRE 323
Query: 225 TLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGV---DLLRRMLCLDPSKRLTAREAL 281
P S L G D D L ML + P KR +A E L
Sbjct: 324 FFNRRGELRHITKLKP-WSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECL 382
Query: 282 RHEYFK 287
RH +
Sbjct: 383 RHPWLN 388
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 96 TKNPLKIKKYLHQI---LHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPID 152
T+ P+ K+ + I + + H I+HRD+KPAN +I + + VK+ DFG+AR I
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIA 167
Query: 153 VPLENYTIKG---GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
+ T G+ Y +PE+ G DV+++ C E++T + F
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y QI+ Y HS ++++RDLKP N LID+ + +++ DFG A+ +KG +
Sbjct: 146 YAAQIVLTFEYLHSLDLIYRDLKPENLLIDQ-QGYIQVTDFGFAK---------RVKGRT 195
Query: 165 --LCYK----APERLLGSGRYSTPVDVWAVACTFAEMVT 197
LC APE +L G Y+ VD WA+ EM
Sbjct: 196 WXLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAA 233
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIR---EVSLLKELK 57
RY L E++ G VH A D V VK + + PS +R E L
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD--PSFYLRFRREAQNAAALN 70
Query: 58 HENIVRLLNVQSSVDSID----LVFENLD-FDLLHFMKTEPTVTKNPLKIKKYLHQILHG 112
H IV + + + +V E +D L + TE +T P + + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT--PKRAIEVIADACQA 128
Query: 113 VAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG---GSLCYKA 169
+ + H I+HRD+KPAN LI + + VK+ DFG+AR I + G+ Y +
Sbjct: 129 LNFSHQNGIIHRDVKPANILIS-ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 170 PERLLGSGRYSTPVDVWAVACTFAEMVTHQRLF 202
PE+ G DV+++ C E++T + F
Sbjct: 188 PEQARGDS-VDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 NTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 47 IREVSLLKELKHENIVRLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLKIKKY 105
+ E S++ + H NI+RL V + +V E ++ L F++T +++
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGM 156
Query: 106 LHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGS 164
L + G+ Y +HRDL N L+D S + K++DFGL+R + D P T GG
Sbjct: 157 LRGVGAGMRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 165 LC--YKAPERLLGSGRYSTPVDVWAVACTFAEMVTH 198
+ + APE + +S+ DVW+ E++ +
Sbjct: 216 IPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLAY 250
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 25/120 (20%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS 164
Y Q+ G+ + S++ +HRDL N L+ + ++VKI DFGLAR I +Y KG +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSEN-NVVKICDFGLARDI-YKNPDYVRKGDT 261
Query: 165 ---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGTP 221
L + APE + YST DVW+ LL IFS+ G+P
Sbjct: 262 RLPLKWMAPESIFDK-IYSTKSDVWSYGV-------------------LLWEIFSLGGSP 301
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 30/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFE-----------------NLDFDLLHFMKTEPTVT 96
+ KH+NI+ LL + + ++ E L+F E ++
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 97 KNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLE 156
L Y Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I
Sbjct: 149 SKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDX 205
Query: 157 NYTIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 247
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 95/244 (38%), Gaps = 57/244 (23%)
Query: 101 KIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI--------- 151
++++Y+ + + H I+HRD+KP+NFL +R + DFGLA+
Sbjct: 118 EVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 152 ----DVPLENYTIKGGSLC---------------YKAPERLLGSGRYSTPVDVWAVACTF 192
+ E + S+C ++APE L +T +D+W+ F
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 193 AEMVTHQRLFHSRWAPGLLAAIFSIMGTPDSETLPXXXXXXXXXXXXPNRSPIKDL---- 248
+++ + F+ A L A+ IM S P +DL
Sbjct: 238 LSLLSGRYPFYK--ASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLC 295
Query: 249 --------------------ATVVGGLE--PD-GVDLLRRMLCLDPSKRLTAREALRHEY 285
AT + G PD DLL ++L L+P+ R+TA EAL H +
Sbjct: 296 ERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPF 355
Query: 286 FKDF 289
FKD
Sbjct: 356 FKDM 359
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGR- 178
+I+HRD+KP+N L+DRS +I K+ DFG++ + V T G Y APER+ S
Sbjct: 146 KIIHRDIKPSNILLDRSGNI-KLCDFGISGQL-VDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 179 --YSTPVDVWAVACTFAEMVTHQRLFHSRW 206
Y DVW++ T E+ T R + +W
Sbjct: 204 QGYDVRSDVWSLGITLYELATG-RFPYPKW 232
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 3 TLLEVIREGRYGAVHRAH----DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH 58
L + + EG +G V +A G T V K+ N S ++ E ++LK++ H
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLK---------------- 101
++++L S + L+ E + L F++ V L
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 102 ------IKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPL 155
+ + QI G+ Y +++HRDL N L+ + + KI+DFGL+R DV
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM-KISDFGLSR--DVYE 202
Query: 156 ENYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
E+ +K + + A E L Y+T DVW+ E+VT
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVT 247
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 7 VIREGRYGAVHRA-HDSLTGDTVVV-----KKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
++ EG +G V+ + + G+ + V KK ++ E + E ++K L H +
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE----KFMSEAVIMKNLDHPH 86
Query: 61 IVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAYC 116
IV+L+ + + ++ E + +L H+++ KN LK+ Y QI +AY
Sbjct: 87 IVKLIGIIEE-EPTWIIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYL 141
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERLLG 175
S +HRD+ N L+ S + VK+ DFGL+R I D ++ + + +PE +
Sbjct: 142 ESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES-IN 199
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQR 200
R++T DVW A E+++ +
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGK 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 7 VIREGRYGAVHRA-HDSLTGDTVVV-----KKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
++ EG +G V+ + + G+ + V KK ++ E + E ++K L H +
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE----KFMSEAVIMKNLDHPH 74
Query: 61 IVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAYC 116
IV+L+ + + ++ E + +L H+++ KN LK+ Y QI +AY
Sbjct: 75 IVKLIGIIEE-EPTWIIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYL 129
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERLLG 175
S +HRD+ N L+ S + VK+ DFGL+R I D ++ + + +PE +
Sbjct: 130 ESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES-IN 187
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQR 200
R++T DVW A E+++ +
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGK 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 35/226 (15%)
Query: 3 TLLEVIREGRYGAVHRAH----DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH 58
L + + EG +G V +A G T V K+ N S ++ E ++LK++ H
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLK---------------- 101
++++L S + L+ E + L F++ V L
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 102 ------IKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPL 155
+ + QI G+ Y +++HRDL N L+ + + KI+DFGL+R DV
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM-KISDFGLSR--DVYE 202
Query: 156 ENYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
E+ +K + + A E L Y+T DVW+ E+VT
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVT 247
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 7 VIREGRYGAVHRA-HDSLTGDTVVV-----KKIPIMNPSEGVPSSVIREVSLLKELKHEN 60
++ EG +G V+ + + G+ + V KK ++ E S E ++K L H +
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS----EAVIMKNLDHPH 70
Query: 61 IVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKK---YLHQILHGVAYC 116
IV+L+ + + ++ E + +L H+++ KN LK+ Y QI +AY
Sbjct: 71 IVKLIGIIEE-EPTWIIMELYPYGELGHYLER----NKNSLKVLTLVLYSLQICKAMAYL 125
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLENYTIKGGSLCYKAPERLLG 175
S +HRD+ N L+ S + VK+ DFGL+R I D ++ + + +PE +
Sbjct: 126 ESINCVHRDIAVRNILV-ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES-IN 183
Query: 176 SGRYSTPVDVWAVACTFAEMVTHQR 200
R++T DVW A E+++ +
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGK 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 35/226 (15%)
Query: 3 TLLEVIREGRYGAVHRAH----DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKH 58
L + + EG +G V +A G T V K+ N S ++ E ++LK++ H
Sbjct: 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 59 ENIVRLLNVQSSVDSIDLVFENLDFDLLH-FMKTEPTVTKNPLK---------------- 101
++++L S + L+ E + L F++ V L
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 102 ------IKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPL 155
+ + QI G+ Y ++HRDL N L+ + + KI+DFGL+R DV
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKM-KISDFGLSR--DVYE 202
Query: 156 ENYTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
E+ +K + + A E L Y+T DVW+ E+VT
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVT 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +L
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKLN 92
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 210
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 211 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +L
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKLN 106
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 224
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 225 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 76 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFG A+ + + Y +GG + K A E +
Sbjct: 135 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMT 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 6 EVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNP--SEGVPSSVIREVSLLKELKHENIVR 63
+VI G +G V H L G + I + +E + E S++ + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 64 LLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILH 123
L V + + ++ E ++ L + +++ L I G+ Y +H
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 132
Query: 124 RDLKPANFLIDRSKDIVKIADFGLARPI--DVPLENYTIKGGS---LCYKAPERLLGSGR 178
R L N L++ S + K++DFGL+R + D YT G + + APE + +
Sbjct: 133 RALAARNILVN-SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE-AIQYRK 190
Query: 179 YSTPVDVWAVACTFAEMVTH 198
+++ DVW+ E++++
Sbjct: 191 FTSASDVWSYGIVMWEVMSY 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 77
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 78 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFG A+ + + Y +GG + K A E +
Sbjct: 137 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 196 LHR-IYTHQSDVWSYGVTVWELMT 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 76 VDNPHVCRLLGI-CLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFG A+ + + Y +GG + K A E +
Sbjct: 135 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMT 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 203
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 204 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 206
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 207 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTEN-NVMKIADFGLARDINNIDYYK 201
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 202 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 241
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP-LENYTIKGG 163
Y +++ + HS +HRD+KP N L+D+S + K+ADFG ++ + G
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL-KLADFGTCMKMNKEGMVRCDTAVG 231
Query: 164 SLCYKAPERLL---GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGT 220
+ Y +PE L G G Y D W+V EM+ F+ A L+ IM
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY---ADSLVGTYSKIMNH 288
Query: 221 PDSETLP 227
+S T P
Sbjct: 289 KNSLTFP 295
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP-LENYTIKGG 163
Y +++ + HS +HRD+KP N L+D+S + K+ADFG ++ + G
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL-KLADFGTCMKMNKEGMVRCDTAVG 236
Query: 164 SLCYKAPERLL---GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGT 220
+ Y +PE L G G Y D W+V EM+ F+ A L+ IM
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY---ADSLVGTYSKIMNH 293
Query: 221 PDSETLP 227
+S T P
Sbjct: 294 KNSLTFP 300
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYK 260
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 261 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 300
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVP-LENYTIKGG 163
Y +++ + HS +HRD+KP N L+D+S + K+ADFG ++ + G
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL-KLADFGTCMKMNKEGMVRCDTAVG 236
Query: 164 SLCYKAPERLL---GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIMGT 220
+ Y +PE L G G Y D W+V EM+ F+ A L+ IM
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY---ADSLVGTYSKIMNH 293
Query: 221 PDSETLP 227
+S T P
Sbjct: 294 KNSLTFP 300
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 6 EVIREGRYGAVHRAHDSLTG--DTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
EVI G +G V R G ++ V K +E + E S++ + +H NI+R
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 64 LLNVQSSVDSIDLV---FENLDFD-LLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQ 119
L V ++ + ++ EN D L + TV +++ L I G+ Y
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAEM 135
Query: 120 EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN-----YTIKGGS---LCYKAPE 171
+HRDL N L++ S + K++DFGL+R ++ EN YT G + + APE
Sbjct: 136 SYVHRDLAARNILVN-SNLVCKVSDFGLSRFLE---ENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 172 RLLGSGRYSTPVDVWAVACTFAEMVT 197
+ ++++ D W+ E+++
Sbjct: 192 -AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSS----VIREVSLLKEL 56
++TL ++ +G +G+V A D VK M ++ + SS +RE + +KE
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLK-QEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 57 KHENIVRLLNVQSSVDSID------LVFENLDFDLLHFMKTEPTVTKNPLKIK-----KY 105
H ++ +L+ V + ++ + LH + +NP + ++
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 106 LHQILHGVAYCHSQEILHRDLKPANFLIDRSKDI-VKIADFGLARPIDVPLENYTIKGGS 164
+ I G+ Y S+ +HRDL N ++ ++D+ V +ADFGL+R I +Y +G +
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCML--AEDMTVCVADFGLSRKIYSG--DYYRQGCA 198
Query: 165 LCYKAPERL-----LGSGRYSTPVDVWAVACTFAEMVT 197
K P + L Y+ DVWA T E++T
Sbjct: 199 --SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
+ TL + + EG +G V A D V K+ + +E S ++ E+ ++K
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKTE-----------PTVTKNPLK 101
+ KH+NI+ LL + + ++ E +L +++ V + +
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
K + +Q+ G+ Y SQ+ +HRDL N L+ + ++++IADFGLAR I+
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMRIADFGLARDINNIDYYK 214
Query: 159 TIKGGSLCYK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
G L K APE L Y+ DVW+ E+ T
Sbjct: 215 KTTNGRLPVKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANSFV 195
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL S D+WA+ C ++V
Sbjct: 196 GTAQYVSPE-LLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 34/224 (15%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKILI 86
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDFDLLHFMKTEPTVTKNPLKIKK--- 104
H N+V LL + +V F NL L + E K P + K
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 105 -------YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN 157
Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR D+ +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLAR--DIXKDP 202
Query: 158 YTIKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
++ G L + APE + Y+ DVW+ E+ +
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 81 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFG A+ + + Y +GG + K A E +
Sbjct: 140 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 199 LHR-IYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 76 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFG A+ + + Y +GG + K A E +
Sbjct: 135 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 194 LHR-IYTHQSDVWSYGVTVWELMT 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELK 57
+++ +I G +G V+ + TG +K K M E + + +SL+
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
IV + + D + + + ++ LH+ ++ V ++ Y +I+ G+ + H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAEIILGLEHMH 309
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
++ +++RDLKPAN L+D V+I+D GLA D + G+ Y APE L
Sbjct: 310 NRFVVYRDLKPANILLDEHGH-VRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 178 RYSTPVDVWAVACTFAEMV 196
Y + D +++ C +++
Sbjct: 367 AYDSSADWFSLGCMLFKLL 385
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 92
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 210
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 211 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 25 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 83
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 84 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 144 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 201
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 202 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLDFDLL--HFMKTEP---TVTKNP-------LK 101
+ KH+NI+ LL + + ++ E L + EP + NP L
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 102 IKKYL---HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLEN 157
K + +Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYK 207
Query: 158 YTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 208 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 247
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELK 57
+++ +I G +G V+ + TG +K K M E + + +SL+
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
IV + + D + + + ++ LH+ ++ V ++ Y +I+ G+ + H
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAEIILGLEHMH 308
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
++ +++RDLKPAN L+D V+I+D GLA D + G+ Y APE L
Sbjct: 309 NRFVVYRDLKPANILLDEHGH-VRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGV 365
Query: 178 RYSTPVDVWAVACTFAEMV 196
Y + D +++ C +++
Sbjct: 366 AYDSSADWFSLGCMLFKLL 384
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELK 57
+++ +I G +G V+ + TG +K K M E + + +SL+
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
IV + + D + + + ++ LH+ ++ V ++ Y +I+ G+ + H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAEIILGLEHMH 309
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
++ +++RDLKPAN L+D V+I+D GLA D + G+ Y APE L
Sbjct: 310 NRFVVYRDLKPANILLDEHGH-VRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 178 RYSTPVDVWAVACTFAEMV 196
Y + D +++ C +++
Sbjct: 367 AYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVK----KIPIMNPSEGVPSSVIREVSLLKELK 57
+++ +I G +G V+ + TG +K K M E + + +SL+
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCH 117
IV + + D + + + ++ LH+ ++ V ++ Y +I+ G+ + H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-DMRFYAAEIILGLEHMH 309
Query: 118 SQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSG 177
++ +++RDLKPAN L+D V+I+D GLA D + G+ Y APE L
Sbjct: 310 NRFVVYRDLKPANILLDEHGH-VRISDLGLA--CDFSKKKPHASVGTHGYMAPEVLQKGV 366
Query: 178 RYSTPVDVWAVACTFAEMV 196
Y + D +++ C +++
Sbjct: 367 AYDSSADWFSLGCMLFKLL 385
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVY-SEQDELDFLMEALIISKFN 106
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 107 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 224
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 225 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 89/230 (38%), Gaps = 20/230 (8%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVRLLNV 67
I G + V++ D+ T V ++ ++ E LK L+H NIVR +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 68 QSSV----DSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE--I 121
S I LV E L V K + ++ + QIL G+ + H++ I
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV-LRSWCRQILKGLQFLHTRTPPI 152
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGSGRYST 181
+HRDLK N I VKI D GLA I G+ + APE +Y
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI--GTPEFXAPEXY--EEKYDE 208
Query: 182 PVDVWAVACTFAEMVTHQRLF---------HSRWAPGLLAAIFSIMGTPD 222
VDV+A E T + + + R G+ A F + P+
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 258
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 91
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 92 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 152 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 209
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 210 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 106
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 107 HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 167 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 224
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 225 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 YTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIM------NPSEGVPSSVIREVSLLKE 55
+ ++V+ G +G V++ G+ V KIP+ S ++ E ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKV---KIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 56 LKHENIVRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAY 115
+ + ++ RLL + ++ L+ + + F L E + + QI G+ Y
Sbjct: 74 VDNPHVCRLLGI-CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 116 CHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYK--APERL 173
+ ++HRDL N L+ ++ VKI DFG A+ + + Y +GG + K A E +
Sbjct: 133 LEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 174 LGSGRYSTPVDVWAVACTFAEMVT 197
L Y+ DVW+ T E++T
Sbjct: 192 LHR-IYTHQSDVWSYGVTVWELMT 214
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 91
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 92 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 152 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 209
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 210 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 40 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 98
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 99 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 159 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 216
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 217 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 50 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 108
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 109 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 169 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 226
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 227 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKILI 87
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDF-------DLLHFMKTEPTVTKNPL 100
H N+V LL + +V F NL + + + + + K+ L
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 101 KIKK---YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN 157
++ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDI-YKDPD 205
Query: 158 YTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y KG + L + APE + Y+ DVW+ E+ +
Sbjct: 206 YVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 247
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 51 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 109
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 110 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ Y KGG +
Sbjct: 170 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPV 227
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 228 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 132
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 133 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ Y KGG +
Sbjct: 193 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRAGYYRKGGCAMLPV 250
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 251 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 4 LLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIVR 63
LLE+ GR+G V +A L D V VK P+ + RE+ +KHEN+++
Sbjct: 19 LLEIKARGRFGCVWKAQ--LMNDFVAVKIFPLQDKQSWQSE---REIFSTPGMKHENLLQ 73
Query: 64 LLNVQSSVDSIDL------VFENLDFDLLHFMKTEPTVTKNPL-----KIKKYLHQILHG 112
+ + ++++ F + L ++K +T N L + + L +
Sbjct: 74 FIAAEKRGSNLEVELWLITAFHD-KGSLTDYLKGN-IITWNELCHVAETMSRGLSYLHED 131
Query: 113 VAYC----HSQEILHRDLKPANFLIDRSKDIVKIADFGLA---RPIDVPLENYTIKGGSL 165
V +C H I HRD K N L+ +S +ADFGLA P P + + + G+
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLL-KSDLTAVLADFGLAVRFEPGKPPGDTHG-QVGTR 189
Query: 166 CYKAPERLLGSGRYSTP----VDVWAVACTFAEMVT 197
Y APE L G+ + +D++A+ E+V+
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKK-IPIMNPSEGVPS--SVIREVSLLKELKHENI 61
L+V+ G +G VH+ G+++ + I ++ G S +V + + L H +I
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
VRLL + S+ LV + L L + P + + QI G+ Y +
Sbjct: 78 VRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 136
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+HR+L N L+ +S V++ADFG+A P D Y+ + + A E + G+Y
Sbjct: 137 VHRNLAARNVLL-KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI-HFGKY 194
Query: 180 STPVDVWAVACTFAEMVT 197
+ DVW+ T E++T
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 16 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 74
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 75 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 131
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 132 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 188
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 189 SDVWSFGVLMWEAFSY 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 60 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 118
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 119 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+AR D+ +Y KGG +
Sbjct: 179 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPV 236
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 237 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 86
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 87 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 143
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 144 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 200
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 201 SDVWSFGVLMWEAFSY 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 18 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 76
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 77 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 133
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 134 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 190
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 191 SDVWSFGVLMWEAFSY 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 80
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 81 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 137
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 138 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 194
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 195 SDVWSFGVLMWEAFSY 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR--ALMSELKILI 85
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDFDLLHFMKTEPTVTKNPLK------ 101
H N+V LL + +V F NL L + E K+ K
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKDLYKDFLTLE 144
Query: 102 -IKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTI 160
+ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +Y
Sbjct: 145 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDI-YKDPDYVR 202
Query: 161 KGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
KG + L + APE + Y+ DVW+ E+ +
Sbjct: 203 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 241
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 96
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 97 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 153
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 154 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 210
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 211 SDVWSFGVLMWEAFSY 226
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 96
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 97 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 153
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 154 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 210
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 211 SDVWSFGVLMWEAFSY 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 5 LEVIREGRYGAVHRAHDSLTGDTVVVKK-IPIMNPSEGVPS--SVIREVSLLKELKHENI 61
L+V+ G +G VH+ G+++ + I ++ G S +V + + L H +I
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEI 121
VRLL + S+ LV + L L + P + + QI G+ Y +
Sbjct: 96 VRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 154
Query: 122 LHRDLKPANFLIDRSKDIVKIADFGLAR--PIDVPLENYTIKGGSLCYKAPERLLGSGRY 179
+HR+L N L+ +S V++ADFG+A P D Y+ + + A E + G+Y
Sbjct: 155 VHRNLAARNVLL-KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI-HFGKY 212
Query: 180 STPVDVWAVACTFAEMVT 197
+ DVW+ T E++T
Sbjct: 213 THQSDVWSYGVTVWELMT 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 36 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 94
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 95 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 151
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 152 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 208
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 209 SDVWSFGVLMWEAFSY 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 107 HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC 166
+Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+ G L
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 167 YK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
K APE L Y+ DVW+ E+ T
Sbjct: 223 VKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 107 HQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLC 166
+Q+ G+ Y SQ+ +HRDL N L+ + +++KIADFGLAR I+ G L
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTEN-NVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 167 YK--APERLLGSGRYSTPVDVWAVACTFAEMVT 197
K APE L Y+ DVW+ E+ T
Sbjct: 223 VKWMAPEALFDR-VYTHQSDVWSFGVLMWEIFT 254
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR--ALMSELKILI 85
Query: 58 ----HENIVRLLNVQSSVDS-IDLVFENLDF-DLLHFMKTEPT-------VTKNPLKIKK 104
H N+V LL + + ++ E F +L +++++ + K+ L ++
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 105 ---YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIK 161
Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +Y K
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLARDI-YKDPDYVRK 203
Query: 162 GGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G + L + APE + Y+ DVW+ E+ +
Sbjct: 204 GDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 241
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 103 KKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPID-VPLENYTIK 161
K Y +++ + HS ++HRD+KP N L+D+ + K+ADFG +D + +
Sbjct: 177 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL-KLADFGTCMKMDETGMVHCDTA 235
Query: 162 GGSLCYKAPERLL---GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFSIM 218
G+ Y +PE L G G Y D W+V EM+ F+ A L+ IM
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFY---ADSLVGTYSKIM 292
Query: 219 GTPDSETLP 227
+S P
Sbjct: 293 DHKNSLCFP 301
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 37/172 (21%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
YL +++ + H +HRD+KP N L+D + I ++ADFG + +E+ T++
Sbjct: 180 YLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHI-RLADFGSCLKL---MEDGTVQSSV 235
Query: 163 --GSLCYKAPERLL----GSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPGLLAAIFS 216
G+ Y +PE L G GRY D W++ EM+ + F+ A L+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY---AESLVETYGK 292
Query: 217 IMGTPDSETLPXXXXXXXXXXXXPNRSPIKDLATVVGGLEPDGVDLLRRMLC 268
IM + P T V + + DL+RR++C
Sbjct: 293 IMNHKERFQFP----------------------TQVTDVSENAKDLIRRLIC 322
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 80
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFE-----------------NLDFDLLHFMKTEPTVT 96
+ KH+NI+ LL + + ++ E L++ E ++
Sbjct: 81 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 140
Query: 97 KNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPL 155
L Y Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 141 SKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 197
Query: 156 ENYTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFE-----------------NLDFDLLHFMKTEPTVT 96
+ KH+NI+ LL + + ++ E L++ E ++
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 97 KNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPL 155
L Y Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 149 SKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 205
Query: 156 ENYTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 247
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANAFV 193
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 194 GTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 81
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFE-----------------NLDFDLLHFMKTEPTVT 96
+ KH+NI+ LL + + ++ E L++ E ++
Sbjct: 82 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 97 KNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPL 155
L Y Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 142 SKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 198
Query: 156 ENYTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 43/244 (17%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT--------------EPTVTKN 98
+ KH+NI+ LL + + ++ E +L +++ P +
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 148
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENY 158
+ +Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR D+ +Y
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLAR--DIHHIDY 205
Query: 159 TIKGGSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWAPG-LLAAIFSI 217
K +GR PV A F + THQ W+ G LL IF++
Sbjct: 206 YKK------------TTNGR--LPVKWMAPEALFDRIYTHQ---SDVWSFGVLLWEIFTL 248
Query: 218 MGTP 221
G+P
Sbjct: 249 GGSP 252
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 77
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFE-----------------NLDFDLLHFMKTEPTVT 96
+ KH+NI+ LL + + ++ E L++ E ++
Sbjct: 78 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 97 KNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPL 155
L Y Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 138 SKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 194
Query: 156 ENYTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 236
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 6 EVIREGRYGAVHRAH---DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+VI EG +G V +A D L D + + + + + EV L K H NI+
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNII 89
Query: 63 RLLNVQSSVDSIDLVFENLDF-DLLHFMK------TEPTV-----TKNPLKIKKYLH--- 107
LL + L E +LL F++ T+P T + L ++ LH
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 108 QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCY 167
+ G+ Y ++ +HRDL N L+ + + KIADFGL+R +V ++ T+ + +
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENY-VAKIADFGLSRGQEVYVKK-TMGRLPVRW 207
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
A E L S Y+T DVW+ E+V+
Sbjct: 208 MAIESLNYS-VYTTNSDVWSYGVLLWEIVS 236
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 30/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFE-----------------NLDFDLLHFMKTEPTVT 96
+ KH+NI+ LL + + ++ E L++ E ++
Sbjct: 130 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 189
Query: 97 KNPLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPL 155
L Y Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 190 SKDLVSCAY--QVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDY 246
Query: 156 ENYTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 288
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 80
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 81 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 137
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGS---LCYKAPERLLGSGRYSTPV 183
N L+ ++ KI+DFGL++ + Y + + + APE + ++S+
Sbjct: 138 AARNVLL-VTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE-CINYYKFSSKS 195
Query: 184 DVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 196 DVWSFGVLMWEAFSY 210
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 22/210 (10%)
Query: 6 EVIREGRYGAVHRAH---DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELKHENIV 62
+VI EG +G V +A D L D + + + + + EV L K H NI+
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNII 79
Query: 63 RLLNVQSSVDSIDLVFENLDF-DLLHFMK------TEPTV-----TKNPLKIKKYLH--- 107
LL + L E +LL F++ T+P T + L ++ LH
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 108 QILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCY 167
+ G+ Y ++ +HRDL N L+ + + KIADFGL+R +V ++ T+ + +
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENY-VAKIADFGLSRGQEVYVKK-TMGRLPVRW 197
Query: 168 KAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
A E L Y+T DVW+ E+V+
Sbjct: 198 MAIES-LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 109 ILHGVAYCHSQ-EILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCY 167
I+ + + HS+ ++HRD+KP+N LI+ + VK+ DFG++ + V TI G Y
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLIN-ALGQVKMCDFGISGYL-VDSVAKTIDAGCKPY 219
Query: 168 KAPERL---LGSGRYSTPVDVWAVACTFAEMVTHQRLFHSRWA 207
APER+ L YS D+W++ T E+ R + W
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAIL-RFPYDSWG 261
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 26/221 (11%)
Query: 1 RYTLLEVIREGRYGAVHRAH------DSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLK 54
R L + + EG +G V A D T V K+ + +E S +I E+ ++K
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 55 EL-KHENIVRLLNVQSSVDSIDLVFENLD-FDLLHFMKT--------------EPTVTKN 98
+ KH+NI+ LL + + ++ E +L +++ P +
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 99 PLKIKKYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPI-DVPLEN 157
+ +Q+ G+ Y S++ +HRDL N L+ +++KIADFGLAR I +
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED-NVMKIADFGLARDIHHIDYYK 192
Query: 158 YTIKGG-SLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
T G + + APE L Y+ DVW+ E+ T
Sbjct: 193 KTTNGRLPVKWMAPEALFDR-IYTHQSDVWSFGVLLWEIFT 232
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 2 YTLLEVIREGRYGAVH----RAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
+ LL VI G Y V + D + VV K++ +N E + + +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--VNDDEDIDWVQTEKHVFEQASN 68
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +V L + + + V E ++ DL+ M+ + + + + Y +I + Y
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--YSAEISLALNYL 126
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H + I++RDLK N L+D S+ +K+ D+G+ + P + + G+ Y APE L G
Sbjct: 127 HERGIIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLF 202
Y VD WA+ EM+ + F
Sbjct: 186 D-YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 380 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 438
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 439 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 495
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 496 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 552
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 553 SDVWSFGVLMWEAFSY 568
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANSFV 196
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 197 GTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 15/196 (7%)
Query: 11 GRYGAVHRAHDSLTGDTVVVKKIPIMNPSE--GVPSSVIREVSLLKELKHENIVRLLNVQ 68
G +G V + + + V + N + + ++ E +++++L + IVR++ +
Sbjct: 381 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI- 439
Query: 69 SSVDSIDLVFENLDFDLL--HFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQEILHRDL 126
+S LV E + L + + KN +++ +HQ+ G+ Y +HRDL
Sbjct: 440 CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL---VHQVSMGMKYLEESNFVHRDL 496
Query: 127 KPANFLIDRSKDIVKIADFGLARPIDVPLENY----TIKGGSLCYKAPERLLGSGRYSTP 182
N L+ ++ KI+DFGL++ + ENY T + + APE + ++S+
Sbjct: 497 AARNVLL-VTQHYAKISDFGLSKALRAD-ENYYKAQTHGKWPVKWYAPE-CINYYKFSSK 553
Query: 183 VDVWAVACTFAEMVTH 198
DVW+ E ++
Sbjct: 554 SDVWSFGVLMWEAFSY 569
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 2 YTLLEVIREGRYGAVH----RAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
+ LL VI G Y V + D + VV K++ +N E + + +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--VNDDEDIDWVQTEKHVFEQASN 79
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +V L + + + V E ++ DL+ M+ + + + + Y +I + Y
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--YSAEISLALNYL 137
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H + I++RDLK N L+D S+ +K+ D+G+ + P + + G+ Y APE L G
Sbjct: 138 HERGIIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLF 202
Y VD WA+ EM+ + F
Sbjct: 197 D-YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 2 YTLLEVIREGRYGAVH----RAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
+ LL VI G Y V + D + VV K++ +N E + + +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL--VNDDEDIDWVQTEKHVFEQASN 64
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +V L + + + V E ++ DL+ M+ + + + + Y +I + Y
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--YSAEISLALNYL 122
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H + I++RDLK N L+D S+ +K+ D+G+ + P + + G+ Y APE L G
Sbjct: 123 HERGIIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLF 202
Y VD WA+ EM+ + F
Sbjct: 182 D-YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 8 IREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSV------IREVSLLKELKHENI 61
I +G +G VH+ V +K + I+ SEG + REV ++ L H NI
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSL-ILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 62 VRLLNVQSSVDSIDLVFENLDFDLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYCHSQE- 120
V+L + + + + F DL H + + K +K++ L I G+ Y +Q
Sbjct: 86 VKLYGLMHNPPRMVMEFVPCG-DLYHRLLDKAHPIKWSVKLRLML-DIALGIEYMQNQNP 143
Query: 121 -ILHRDLKPANFLI----DRSKDIVKIADFGLARPIDVPLENYTIKG--GSLCYKAPERL 173
I+HRDL+ N + + + K+ADFGL++ +++ G G+ + APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ-----SVHSVSGLLGNFQWMAPETI 198
Query: 174 LGSGR-YSTPVDVWAVACTFAEMVTHQRLF 202
Y+ D ++ A ++T + F
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANSFV 192
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 193 GTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKILI 76
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDF-------DLLHFMKTEPTVTKNPL 100
H N+V LL + +V F NL + + + + K+ L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 101 KIKK---YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN 157
++ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDI-YKDPD 194
Query: 158 YTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y KG + L + APE + Y+ DVW+ E+ +
Sbjct: 195 YVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKILI 122
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDF-------DLLHFMKTEPTVTKNPL 100
H N+V LL + +V F NL + + + + K+ L
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 101 KIKK---YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN 157
++ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDI-YKDPD 240
Query: 158 YTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y KG + L + APE + Y+ DVW+ E+ +
Sbjct: 241 YVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKILI 85
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDF-------DLLHFMKTEPTVTKNPL 100
H N+V LL + +V F NL + + + + K+ L
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 101 KIKK---YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN 157
++ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDI-YKDPD 203
Query: 158 YTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y KG + L + APE + Y+ DVW+ E+ +
Sbjct: 204 YVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 31/222 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR--ALMSELKILI 87
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDFDLL----HFMKTEPT-VTKNPLKI 102
H N+V LL + +V F NL L F+ +P + K+ L +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 103 K---KYLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYT 159
+ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR D+ +
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS-EKNVVKICDFGLAR--DIXKDPDX 204
Query: 160 IKGGS----LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
++ G L + APE + Y+ DVW+ E+ +
Sbjct: 205 VRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 245
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 3 TLLEVIREGRYGAVHRAHDS-LTGD----TVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
TL+ + G +G V+ S + D V VK +P + SE + E ++ +
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFN 92
Query: 58 HENIVRLLNVQ-SSVDSIDLVFENLDFDLLHFMK-TEPTVTK-NPLKIKKYLH---QILH 111
H+NIVR + V S+ L+ DL F++ T P ++ + L + LH I
Sbjct: 93 HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 112 GVAYCHSQEILHRDLKPANFLID--RSKDIVKIADFGLARPIDVPLENYTIKGGS----L 165
G Y +HRD+ N L+ + KI DFG+A+ D+ +Y KGG +
Sbjct: 153 GCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ--DIYRASYYRKGGCAMLPV 210
Query: 166 CYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
+ PE + G +++ D W+ E+ +
Sbjct: 211 KWMPPEAFM-EGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 2 YTLLEVIREGRYGAVH----RAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK 57
+ LL VI G Y V + D + VV K++ +N E + + +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL--VNDDEDIDWVQTEKHVFEQASN 111
Query: 58 HENIVRLLNVQSSVDSIDLVFENLDF-DLLHFMKTEPTVTKNPLKIKKYLHQILHGVAYC 116
H +V L + + + V E ++ DL+ M+ + + + + Y +I + Y
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF--YSAEISLALNYL 169
Query: 117 HSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKGGSLCYKAPERLLGS 176
H + I++RDLK N L+D S+ +K+ D+G+ + P + + G+ Y APE L G
Sbjct: 170 HERGIIYRDLKLDNVLLD-SEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 177 GRYSTPVDVWAVACTFAEMVTHQRLF 202
Y VD WA+ EM+ + F
Sbjct: 229 D-YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 1 RYTLLEVIREGRYGAVHRAHDSLTGDTVVVKKIPIMNPSEGVPSSVIREVSLLKELK--- 57
R L + + G +G V A T + + + EG S R +L+ ELK
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR--ALMSELKILI 76
Query: 58 ----HENIVRLLNVQSSVDSIDLV------FENLDF-------DLLHFMKTEPTVTKNPL 100
H N+V LL + +V F NL + + + + K+ L
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 101 KIKK---YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLEN 157
++ Y Q+ G+ + S++ +HRDL N L+ K++VKI DFGLAR I +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGLARDI-YKDPD 194
Query: 158 YTIKGGS---LCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
Y KG + L + APE + Y+ DVW+ E+ +
Sbjct: 195 YVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFS 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANXFV 195
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 196 GTAQYVSPE-LLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANXFV 193
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 194 GTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANXFV 170
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 171 GTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 105 YLHQILHGVAYCHSQEILHRDLKPANFLIDRSKDIVKIADFGLARPIDVPLENYTIKG-- 162
Y +I+ + Y H + I+HRDLKP N L++ I +I DFG A+ + +
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANXFV 171
Query: 163 GSLCYKAPERLLGSGRYSTPVDVWAVACTFAEMVT 197
G+ Y +PE LL D+WA+ C ++V
Sbjct: 172 GTAQYVSPE-LLTEKSACKSSDLWALGCIIYQLVA 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,674,832
Number of Sequences: 62578
Number of extensions: 350542
Number of successful extensions: 3819
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 298
Number of HSP's that attempted gapping in prelim test: 1017
Number of HSP's gapped (non-prelim): 1424
length of query: 293
length of database: 14,973,337
effective HSP length: 98
effective length of query: 195
effective length of database: 8,840,693
effective search space: 1723935135
effective search space used: 1723935135
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)