BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038158
(123 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
Fluorogeranyl Diphosphate (Fgpp).
pdb|2ONG|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
Fluorogeranyl Diphosphate (Fgpp).
pdb|2ONH|A Chain A, Crystal Structure Of Of Limonene Synthase With 2-
Fluorolinalyl Diphosphate(flpp)
pdb|2ONH|B Chain B, Crystal Structure Of Of Limonene Synthase With 2-
Fluorolinalyl Diphosphate(flpp)
Length = 543
Score = 64.7 bits (156), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 6 VKTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXX--XXENVRVH 63
VK T + QLELID LQ +GL+ HF++E + IL +IY E ++
Sbjct: 40 VKMELEKETDQIRQLELIDDLQRMGLSDHFQNEFKEILSSIYLDHHYYKNPFPKEERDLY 99
Query: 64 ATSLEFGLLRQH------EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
+TSL F LLR+H EVF+ FK + +SDD G+L LY AS+
Sbjct: 100 STSLAFRLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASF 149
>pdb|3N0F|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens)
pdb|3N0F|B Chain B, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens)
pdb|3N0G|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens) In Complex With Three Mg2+
Ions And Dimethylallyl-S-Thiolodiphosphate
pdb|3N0G|B Chain B, Crystal Structure Of Isoprene Synthase From Grey Poplar
Leaves (Populus X Canescens) In Complex With Three Mg2+
Ions And Dimethylallyl-S-Thiolodiphosphate
Length = 555
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 7 KTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATS 66
+ I N+ + L LELID +Q LGL Y FES+IR L +HAT+
Sbjct: 55 REINNEKAEFLTLLELIDNVQRLGLGYRFESDIRRALDRFVSSGGFDGVT--KTSLHATA 112
Query: 67 LEFGLLRQH------EVFNGFKETKSYLIS---DDFNGILSLYVASYYSL 107
L F LLRQH E F+GFK+ + +D ILSLY AS+ +L
Sbjct: 113 LSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLAL 162
>pdb|3G4D|A Chain A, Crystal Structure Of (+)-Delta-Cadinene Synthase From
Gossypium Arboreum And Evolutionary Divergence Of Metal
Binding Motifs For Catalysis
pdb|3G4D|B Chain B, Crystal Structure Of (+)-Delta-Cadinene Synthase From
Gossypium Arboreum And Evolutionary Divergence Of Metal
Binding Motifs For Catalysis
pdb|3G4F|A Chain A, Crystal Structure Of (+)- -Cadinene Synthase From
Gossypium Arboreum In Complex With 2-Fluorofarnesyl
Diphosphate
pdb|3G4F|B Chain B, Crystal Structure Of (+)- -Cadinene Synthase From
Gossypium Arboreum In Complex With 2-Fluorofarnesyl
Diphosphate
Length = 554
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 20/121 (16%)
Query: 7 KTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATS 66
K I +L ID++Q LG++YHF EI + L NIY EN ++ TS
Sbjct: 61 KMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIY----HNNNDAEN-DLYTTS 115
Query: 67 LEFGLLRQH------EVFNGFKETKSYL---ISDDFNGILSLYVASYYSLIRRRKRHGEG 117
+ F LLR+H +VFN FK+ + ++ D G+L LY ASY + HGE
Sbjct: 116 IRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRV------HGED 169
Query: 118 L 118
+
Sbjct: 170 I 170
>pdb|2J5C|A Chain A, Rational Conversion Of Substrate And Product Specificity
In A Monoterpene Synthase. Structural Insights Into The
Molecular Basis Of Rapid Evolution.
pdb|2J5C|B Chain B, Rational Conversion Of Substrate And Product Specificity
In A Monoterpene Synthase. Structural Insights Into The
Molecular Basis Of Rapid Evolution
Length = 569
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 5 KVKTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHA 64
+VK + + + +LELID L+ LG++ HFE EI IL + Y + +++
Sbjct: 72 QVKMMLQEEVDSIRRLELIDDLRRLGISCHFEREIVEILNSKY----YTNNEIDERDLYS 127
Query: 65 TSLEFGLLRQH------EVFNGFKETKSY----LISDDFNGILSLYVASYYS 106
T+L F LLRQ+ EVF+ FK K + DD G+L LY AS+ S
Sbjct: 128 TALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLS 179
>pdb|1N1B|A Chain A, Crystal Structure Of (+)-bornyl Diphosphate Synthase From
Sage
pdb|1N1B|B Chain B, Crystal Structure Of (+)-bornyl Diphosphate Synthase From
Sage
pdb|1N1Z|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Pyrophosphate
pdb|1N1Z|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Pyrophosphate
pdb|1N20|A Chain A, (+)-bornyl Diphosphate Synthase: Complex With Mg And
3-aza- 2,3-dihydrogeranyl Diphosphate
pdb|1N20|B Chain B, (+)-bornyl Diphosphate Synthase: Complex With Mg And
3-aza- 2,3-dihydrogeranyl Diphosphate
pdb|1N21|A Chain A, (+)-Bornyl Diphosphate Synthase: Cocrystal With Mg And 3-
Aza-2,3-Dihydrogeranyl Diphosphate
pdb|1N22|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (4r)-7-Aza-7,8-Dihydrolimonene
pdb|1N22|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (4r)-7-Aza-7,8-Dihydrolimonene
pdb|1N23|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (1r,4s)-2-Azabornane
pdb|1N23|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg,
Pyrophosphate, And (1r,4s)-2-Azabornane
pdb|1N24|A Chain A, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Product
pdb|1N24|B Chain B, (+)-Bornyl Diphosphate Synthase: Complex With Mg And
Product
Length = 549
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 5 KVKTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYXX-XXXXXXXXENVRVH 63
+V+ + + +P+ QLELI L+ LGL+ F+ EI+ IL IY E + ++
Sbjct: 43 QVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLY 102
Query: 64 ATSLEFGLLRQH------EVFNGFKETKSY----LISDDFNGILSLYVASYYSLIRR 110
T+L F LLRQH +VFN FK K ++ D G+L LY AS+ L+R+
Sbjct: 103 FTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASF--LLRK 157
>pdb|3LZ9|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase M4
Mut Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl
Diphospha
pdb|3M00|A Chain A, Crystal Structure Of 5-Epi-Aristolochene Synthase M4
Mutant Complexed With (2-Cis,6-Trans)-2-Fluorofarnesyl
Diphosphate
Length = 550
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 70 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 123
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 124 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 157
>pdb|3M01|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase
Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl
Diphosphate
pdb|3M02|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase
Complexed With (2-Cis,6-Trans)-2-Fluorofarnesyl
Diphosphate
Length = 550
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 70 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 123
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 124 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 157
>pdb|4DI5|A Chain A, Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synthase
From Nicotiana Tobaccum With Geraniline
Length = 535
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 55 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 108
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 109 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 142
>pdb|1HXC|A Chain A, Crystal Structure Of Teas C440w
Length = 548
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 68 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 121
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 122 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 155
>pdb|1HX9|A Chain A, Crystal Structure Of Teas W273s Form 1
pdb|1HXA|A Chain A, Crystal Structure Of Teas W273s Form 2
Length = 548
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 68 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 121
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 122 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 155
>pdb|1HXG|A Chain A, Crystal Structure Of Teas W273sC440W
Length = 548
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 68 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 121
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 122 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 155
>pdb|5EAU|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum
Length = 548
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LIDT++ LG++YHFE EI +IL IY + ++L+F LLRQH
Sbjct: 68 LNLIDTIERLGISYHFEKEIDDILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 121
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 122 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 155
>pdb|5EAS|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum
Length = 548
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LID ++ LG++YHFE EI IL IY + ++L+F LLRQH
Sbjct: 68 LNLIDIIERLGISYHFEKEIDEILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 121
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 122 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 155
>pdb|5EAT|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum With
Substrate Analog Farnesyl Hydroxyphosphonate
Length = 548
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 20 LELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVRVHATSLEFGLLRQH---- 75
L LID ++ LG++YHFE EI IL IY + ++L+F LLRQH
Sbjct: 68 LNLIDIIERLGISYHFEKEIDEILDQIYNQNSNCND------LCTSALQFRLLRQHGFNI 121
Query: 76 --EVFNGFKETKSYL---ISDDFNGILSLYVASY 104
E+F+ F++ ++ D G+L+LY AS+
Sbjct: 122 SPEIFSKFQDENGKFKESLASDVLGLLNLYEASH 155
>pdb|3SAE|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDQ|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDR|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDT|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDU|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
pdb|3SDV|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A
Prospective Target For Advanced Biofuels Production
Length = 817
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 16/103 (15%)
Query: 17 LHQLELIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVR----VHATSLEFGLL 72
L +L ++D + LG+ HFE EI+ L +Y + + T+L F LL
Sbjct: 299 LERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLL 358
Query: 73 RQHE------VFNGFKETKSYLI------SDDFNGILSLYVAS 103
R H +F+ FK+ I + D +L+LY AS
Sbjct: 359 RLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRAS 401
>pdb|3PYA|A Chain A, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From
Arabidopsis Thaliana In Complex With
(S)-15-Aza-14,15-Dihydrogeranylgeranyl Thiolodiphosphate
pdb|3PYB|A Chain A, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From
Arabidopsis Thaliana In Complex With
13-Aza-13,14-Dihydrocopalyl Diphosphate
pdb|3PYB|B Chain B, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From
Arabidopsis Thaliana In Complex With
13-Aza-13,14-Dihydrocopalyl Diphosphate
pdb|3PYB|C Chain C, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From
Arabidopsis Thaliana In Complex With
13-Aza-13,14-Dihydrocopalyl Diphosphate
Length = 727
Score = 32.3 bits (72), Expect = 0.071, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 22 LIDTLQGLGLAYHFESEIRNILRNIYXXXXXXXXXXENVR----VHATSLEFGLLRQH-- 75
++D LQ LG++ +FE EI+ L ++ + T++ F LLRQH
Sbjct: 251 IVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGY 310
Query: 76 ----EVFNGFKETKSYLI-----SDDFNGILSLYVASYYSLIR 109
+VF F++ + + G+ +LY AS + R
Sbjct: 311 QVSADVFKNFEKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPR 353
>pdb|3P5P|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew
(Taxus Brevifolia) In Complex With Mg2+ And
13-Aza-13,14-Dihydrocopalyl Diphosphate
pdb|3P5R|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew
(Taxus Brevifolia) In Complex With Mg2+ And
2-Fluorogeranylgeranyl Diphosphate
pdb|3P5R|B Chain B, Crystal Structure Of Taxadiene Synthase From Pacific Yew
(Taxus Brevifolia) In Complex With Mg2+ And
2-Fluorogeranylgeranyl Diphosphate
Length = 764
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 17 LHQLELIDTLQGLGLAYHFESEIRNILRNIY 47
L +L L+D ++ LG+ HF+ EI+ L +Y
Sbjct: 247 LERLSLVDNIEHLGIGRHFKQEIKGALDYVY 277
>pdb|3S9V|A Chain A, Abietadiene Synthase From Abies Grandis
pdb|3S9V|B Chain B, Abietadiene Synthase From Abies Grandis
pdb|3S9V|C Chain C, Abietadiene Synthase From Abies Grandis
pdb|3S9V|D Chain D, Abietadiene Synthase From Abies Grandis
Length = 785
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 17 LHQLELIDTLQGLGLAYHFESEIRNILRNIY 47
+L +DT++ LG+ HF+ EI+ L +Y
Sbjct: 271 FERLWAVDTVERLGIDRHFKEEIKEALDYVY 301
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,128,814
Number of Sequences: 62578
Number of extensions: 97522
Number of successful extensions: 370
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 344
Number of HSP's gapped (non-prelim): 20
length of query: 123
length of database: 14,973,337
effective HSP length: 85
effective length of query: 38
effective length of database: 9,654,207
effective search space: 366859866
effective search space used: 366859866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)