Query 038158
Match_columns 123
No_of_seqs 142 out of 708
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 13:48:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ong_A 4S-limonene synthase; m 100.0 9.4E-39 3.2E-43 275.0 9.9 113 2-116 36-161 (543)
2 3m00_A Aristolochene synthase; 100.0 2.4E-38 8.2E-43 273.6 10.5 108 2-116 51-169 (550)
3 3n0f_A Isoprene synthase; terp 100.0 3.4E-38 1.2E-42 272.9 9.2 112 2-116 49-171 (555)
4 2j5c_A 1,8-cineole synthase; t 100.0 8.7E-38 3E-42 270.6 9.4 110 2-116 69-189 (569)
5 1n1b_A (+)-bornyl diphosphate 100.0 6.3E-38 2.2E-42 270.4 8.2 115 2-116 40-165 (549)
6 3g4d_A (+)-delta-cadinene synt 100.0 1.3E-37 4.3E-42 269.3 8.3 109 2-116 55-174 (554)
7 3sdr_A Alpha-bisabolene syntha 100.0 2.8E-31 9.5E-36 237.7 7.7 103 14-116 296-414 (817)
8 3p5p_A Taxadiene synthase; cla 100.0 5.1E-31 1.7E-35 234.7 8.5 102 14-116 244-362 (764)
9 3s9v_A Abietadiene synthase, c 100.0 8.6E-31 2.9E-35 233.8 8.7 103 14-116 268-386 (785)
10 3pya_A ENT-copalyl diphosphate 100.0 2.1E-30 7.4E-35 229.8 8.6 102 14-116 243-360 (727)
11 1pd3_A Nonstructural protein N 66.0 2.3 8E-05 26.2 1.2 28 2-29 21-48 (58)
12 1q08_A Zn(II)-responsive regul 22.5 73 0.0025 19.9 3.0 26 17-45 3-28 (99)
13 1b0n_B Protein (SINI protein); 21.0 96 0.0033 18.7 3.1 27 15-44 11-37 (57)
No 1
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=9.4e-39 Score=274.97 Aligned_cols=113 Identities=40% Similarity=0.556 Sum_probs=100.7
Q ss_pred cHHHHHHHHhhcCCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccc--c-CCchhhhhHHhhhhhhc---
Q 038158 2 QKGKVKTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKK--E-NVRVHATSLEFGLLRQH--- 75 (123)
Q Consensus 2 lkeeVr~ml~~~~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~--~-~~dL~~~AL~FRLLRqh--- 75 (123)
||++||+|+.++.+++++|+|||+||||||+|||++||+++|+++|+.|.+.. ++ . ..|||+|||+|||||||
T Consensus 36 Lk~~V~~~~~~~~d~~~~l~liD~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~-~~~~~~~~dl~~~al~FRlLR~hGy~ 114 (543)
T 2ong_A 36 LVTLVKMELEKETDQIRQLELIDDLQRMGLSDHFQNEFKEILSSIYLDHHYYK-NPFPKEERDLYSTSLAFRLLREHGFQ 114 (543)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHTTGGGTTHHHHHHHHHHHHHTTTCCC-SSCCCCCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcccCHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhhcccc-cccccccCCHHHHHHHHHHHHHcCCC
Confidence 79999999988779999999999999999999999999999999999875421 11 1 36999999999999999
Q ss_pred ---ccccccccC----CcccccCchHHHHHHHHhhccccccccccccc
Q 038158 76 ---EVFNGFKET----KSYLISDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 76 ---DvF~~F~d~----~~~l~~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
|||++|||+ +.++ ++|++|||||||||||++|||.+|.+.
T Consensus 115 vs~dvf~~Fk~~~g~F~~~l-~~d~~glL~Ly~As~l~~~gE~iL~eA 161 (543)
T 2ong_A 115 VAQEVFDSFKNEEGEFKESL-SDDTRGLLQLYEASFLLTEGETTLESA 161 (543)
T ss_dssp CCGGGGGGGBCTTSSBCTTG-GGCHHHHHHHHHHHTTCCSSCHHHHHH
T ss_pred ccHHHHhcccCCCCCccchh-hhccHHHHHHHHHHHcCCCChHHHHHH
Confidence 999999987 4555 789999999999999999999999764
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=2.4e-38 Score=273.63 Aligned_cols=108 Identities=37% Similarity=0.587 Sum_probs=99.6
Q ss_pred cHHHHHHHHhh-cCCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccccCCchhhhhHHhhhhhhc-----
Q 038158 2 QKGKVKTITND-ATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKKENVRVHATSLEFGLLRQH----- 75 (123)
Q Consensus 2 lkeeVr~ml~~-~~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~~~~dL~~~AL~FRLLRqh----- 75 (123)
||+|||+||.+ ..++.++|+|||+||||||+|||++||+++|+++|+.|.. ..|||+|||+|||||||
T Consensus 51 Lk~eVr~~l~~~~~~~~~~L~lID~lqrLGi~~hF~~EI~~~L~~i~~~~~~------~~dl~~~al~FRLLR~hGy~VS 124 (550)
T 3m00_A 51 LKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKEIDDILDQIYNQNSN------CNDLCTSALQFRLLRQHGFNIS 124 (550)
T ss_dssp HHHHHHHHHTCSSCCHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHHHHHCCC------CSSHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHHhccc------CCCHHHHHHHHHHHHhcCCCCC
Confidence 79999999975 5789999999999999999999999999999999998854 37999999999999999
Q ss_pred -ccccccccC----CcccccCchHHHHHHHHhhccccccccccccc
Q 038158 76 -EVFNGFKET----KSYLISDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 76 -DvF~~F~d~----~~~l~~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
|||++|+|+ ++++ ++|++||||||||||+++|||.+|.+.
T Consensus 125 ~dvf~~F~~~~G~F~~~l-~~d~~glL~LYeAs~l~~~gE~iLdeA 169 (550)
T 3m00_A 125 PEIFSKFQDENGKFKESL-ASDVLGLLNLYEASHVRTHADDILEDA 169 (550)
T ss_dssp GGGGGGGBCTTSCBCGGG-GGCHHHHHHHHHHHTTCCTTCGGGTTH
T ss_pred hHHhhhccccCCCccccc-hhchHHHHHHHHHHhcCCCCcHHHHHH
Confidence 999999976 5667 799999999999999999999998764
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=3.4e-38 Score=272.88 Aligned_cols=112 Identities=39% Similarity=0.556 Sum_probs=98.2
Q ss_pred cHHHHHHHHhhcC-CccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccccCCchhhhhHHhhhhhhc-----
Q 038158 2 QKGKVKTITNDAT-KPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKKENVRVHATSLEFGLLRQH----- 75 (123)
Q Consensus 2 lkeeVr~ml~~~~-~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~~~~dL~~~AL~FRLLRqh----- 75 (123)
||+|||+||.+.. +++++|+|||+||||||+|||++||+++|+++|+.. ...++...|||+|||+|||||||
T Consensus 49 Lk~eVr~~l~~~~~~~~~~L~lID~lqRLGi~~hF~~EI~~~L~~i~~~~--~~~~~~~~DL~~~Al~FRLLR~hGy~VS 126 (555)
T 3n0f_A 49 LEAEVRREINNEKAEFLTLLELIDNVQRLGLGYRFESDIRRALDRFVSSG--GFDGVTKTSLHATALSFRLLRQHGFEVS 126 (555)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHHHHHHTTCGGGSHHHHHHHHHHHHHTC--HHHHHTTTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHhhc--cccccccCCHHHHHHHHHHHHhcCCCcC
Confidence 7999999997666 899999999999999999999999999999999741 00012247999999999999999
Q ss_pred -ccccccccC----CcccccCchHHHHHHHHhhccccccccccccc
Q 038158 76 -EVFNGFKET----KSYLISDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 76 -DvF~~F~d~----~~~l~~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
|||++|+|+ ++++ ++|++||||||||||+++|||.+|.+.
T Consensus 127 ~dvF~~F~d~~G~F~~~l-~~dv~glL~LYeAs~l~~~gE~iLdeA 171 (555)
T 3n0f_A 127 QEAFSGFKDQNGNFLENL-KEDTKAILSLYEASFLALEGENILDEA 171 (555)
T ss_dssp GGGGGGGBCTTSCBCGGG-GGCHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred hHHHhcccccCccchhhh-hhhhHHHHHHHHHHhcccCCcHHHHHH
Confidence 999999976 5667 899999999999999999999988754
No 4
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=8.7e-38 Score=270.56 Aligned_cols=110 Identities=37% Similarity=0.554 Sum_probs=98.9
Q ss_pred cHHHHHHHHhhcCCccchhhHHHHHHhcCCccchHHHHHHHHHHHH-hhcCCCcccccCCchhhhhHHhhhhhhc-----
Q 038158 2 QKGKVKTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIY-NKNKDDKWKKENVRVHATSLEFGLLRQH----- 75 (123)
Q Consensus 2 lkeeVr~ml~~~~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~-~~~~~~~~~~~~~dL~~~AL~FRLLRqh----- 75 (123)
||++||+|+.+..+++++|+|||+||||||+|||++||+++|+++| +.+.+ ...|||+|||+|||||||
T Consensus 69 Lk~~Vr~~~~~~~d~~~~l~lID~lqrLGi~~hFe~EI~~~L~~i~~~~~~~-----~~~Dl~~~al~FRlLR~hGy~Vs 143 (569)
T 2j5c_A 69 MIDQVKMMLQEEVDSIRRLELIDDLRRLGISCHFEREIVEILNSKYYTNNEI-----DERDLYSTALRFRLLRQYDFSVS 143 (569)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTSSCCS-----CTTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhccCc-----ccCChhhhhHHhHHHHhcCCCcC
Confidence 7999999998877999999999999999999999999999999999 76432 246999999999999999
Q ss_pred -ccccccccCCc-ccc---cCchHHHHHHHHhhccccccccccccc
Q 038158 76 -EVFNGFKETKS-YLI---SDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 76 -DvF~~F~d~~~-~l~---~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
|||++|+|++| .+. ++|++|||||||||||++|||.+|.+.
T Consensus 144 ~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~gE~iLdeA 189 (569)
T 2j5c_A 144 QEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLRLA 189 (569)
T ss_dssp GGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred HHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCChHHHHHH
Confidence 99999998755 331 689999999999999999999999764
No 5
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=6.3e-38 Score=270.38 Aligned_cols=115 Identities=37% Similarity=0.501 Sum_probs=99.5
Q ss_pred cHHHHHHHHhhcCCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcc-cccCCchhhhhHHhhhhhhc-----
Q 038158 2 QKGKVKTITNDATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKW-KKENVRVHATSLEFGLLRQH----- 75 (123)
Q Consensus 2 lkeeVr~ml~~~~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~-~~~~~dL~~~AL~FRLLRqh----- 75 (123)
||++||+|+.+..+++++|+|||+||||||+|||++||+++|+++|+.+..... .....|||+|||+|||||||
T Consensus 40 Lk~~V~~~~~~~~d~~~~l~lvD~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs 119 (549)
T 1n1b_A 40 LIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNIS 119 (549)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhcccCHHHHHHhHHHHHhCCchhhhHHHHHHHHHHHHhhhccccccccccCChhhchhhhhHHHhcCCCcC
Confidence 799999999877799999999999999999999999999999999987532100 01136999999999999999
Q ss_pred -ccccccccCCc-ccc---cCchHHHHHHHHhhccccccccccccc
Q 038158 76 -EVFNGFKETKS-YLI---SDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 76 -DvF~~F~d~~~-~l~---~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
|||++|+|++| .+. ++|++||||||||||+++|||.+|.+.
T Consensus 120 ~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~gE~iL~eA 165 (549)
T 1n1b_A 120 QDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELA 165 (549)
T ss_dssp GGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred HHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCCChHHHHHH
Confidence 99999998755 331 689999999999999999999998764
No 6
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=1.3e-37 Score=269.34 Aligned_cols=109 Identities=36% Similarity=0.615 Sum_probs=97.5
Q ss_pred cHHHHHHHHhh-cCCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccccCCchhhhhHHhhhhhhc-----
Q 038158 2 QKGKVKTITND-ATKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKKENVRVHATSLEFGLLRQH----- 75 (123)
Q Consensus 2 lkeeVr~ml~~-~~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~~~~dL~~~AL~FRLLRqh----- 75 (123)
||+|||+||.+ ..++.++|+|||+||||||+|||++||+++|+++|+. . . ....|||+|||+|||||||
T Consensus 55 Lk~eVr~~l~~~~~~~~~~l~lID~lqrLGi~~hF~~EI~~~L~~i~~~-~-~---~~~~dl~~~al~FRlLR~hGy~VS 129 (554)
T 3g4d_A 55 LKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHN-N-N---DAENDLYTTSIRFRLLREHGYNVS 129 (554)
T ss_dssp HHHHHHHHHHSCCSSHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHHHHS-C-C---CTTCCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHHHHHHHHHHHhc-c-C---CCCCCHHHHHHHHHHHHhcCCCCC
Confidence 79999999976 5799999999999999999999999999999999986 2 1 1136999999999999999
Q ss_pred -ccccccccC----CcccccCchHHHHHHHHhhccccccccccccc
Q 038158 76 -EVFNGFKET----KSYLISDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 76 -DvF~~F~d~----~~~l~~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
|||++|+|+ ++++ ++|++||||||||||+++|||.+|.+.
T Consensus 130 ~dvf~~F~~~~g~F~~~l-~~d~~glL~LYeAs~l~~~gE~iLdeA 174 (554)
T 3g4d_A 130 CDVFNKFKDEQGNFKSSV-TSDVRGLLELYQASYLRVHGEDILDEA 174 (554)
T ss_dssp GGGGGGGBCTTSSBCHHH-HHCHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred hhHHhhhcccCCCccccc-ccchHHHHHHHHHHhCCCCCcHHHHHH
Confidence 999999987 4556 689999999999999999999988754
No 7
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=99.97 E-value=2.8e-31 Score=237.72 Aligned_cols=103 Identities=28% Similarity=0.460 Sum_probs=87.7
Q ss_pred CCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccc----cCCchhhhhHHhhhhhhc------cccccccc
Q 038158 14 TKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKK----ENVRVHATSLEFGLLRQH------EVFNGFKE 83 (123)
Q Consensus 14 ~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~----~~~dL~~~AL~FRLLRqh------DvF~~F~d 83 (123)
.+++++|++||+||||||+|||++||+++|+++|+.|.+++.++ ...||++|||+||||||| |||++|+|
T Consensus 296 ~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d 375 (817)
T 3sdr_A 296 VDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKD 375 (817)
T ss_dssp CHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBC
T ss_pred CcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHHcCCCccHhHHHHHhh
Confidence 47799999999999999999999999999999999886532211 236999999999999999 99999997
Q ss_pred CCcccc------cCchHHHHHHHHhhccccccccccccc
Q 038158 84 TKSYLI------SDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 84 ~~~~l~------~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
+++.+. .+|++||||||||||+++|||.+|.+.
T Consensus 376 ~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA 414 (817)
T 3sdr_A 376 ANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEA 414 (817)
T ss_dssp C--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred cCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHH
Confidence 744331 479999999999999999999988754
No 8
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=99.97 E-value=5.1e-31 Score=234.69 Aligned_cols=102 Identities=25% Similarity=0.412 Sum_probs=88.6
Q ss_pred CCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccc----cCCchhhhhHHhhhhhhc------cccccccc
Q 038158 14 TKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKK----ENVRVHATSLEFGLLRQH------EVFNGFKE 83 (123)
Q Consensus 14 ~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~----~~~dL~~~AL~FRLLRqh------DvF~~F~d 83 (123)
.+++++|++||+||||||+|||++||+++|+++|+.|.+++.++ ...||++|||+||||||| |||++|+|
T Consensus 244 ~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d 323 (764)
T 3p5p_A 244 IDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKD 323 (764)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBC
T ss_pred CcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHhcCCCccHhHHHhhhc
Confidence 47799999999999999999999999999999999886532211 136999999999999999 99999997
Q ss_pred CCc-------ccccCchHHHHHHHHhhccccccccccccc
Q 038158 84 TKS-------YLISDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 84 ~~~-------~l~~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
+++ ++ .+|++||||||||||+++|||.+|.+.
T Consensus 324 ~~g~F~~~~~~~-~~dv~gmL~LYeAS~l~~~gE~iLdeA 362 (764)
T 3p5p_A 324 ENGRFFSSAGQT-HVELRSVVNLFRASDLAFPDERAMDDA 362 (764)
T ss_dssp TTSCBCSCTTCS-CCCHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred CCCCcccccccc-ccccHHHHHHHHHHhCCCCCcHHHHHH
Confidence 633 34 689999999999999999999988754
No 9
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=99.96 E-value=8.6e-31 Score=233.77 Aligned_cols=103 Identities=19% Similarity=0.324 Sum_probs=88.5
Q ss_pred CCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCcccc----cCCchhhhhHHhhhhhhc------cccccccc
Q 038158 14 TKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWKK----ENVRVHATSLEFGLLRQH------EVFNGFKE 83 (123)
Q Consensus 14 ~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~~----~~~dL~~~AL~FRLLRqh------DvF~~F~d 83 (123)
.+++++|++||+||||||+|||++||+++|+++|+.|.+++.++ ...||++|||+||||||| |||++|+|
T Consensus 268 ~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d 347 (785)
T 3s9v_A 268 LDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRD 347 (785)
T ss_dssp CHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBC
T ss_pred CcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 47899999999999999999999999999999999886533211 236999999999999999 99999997
Q ss_pred CCcccc------cCchHHHHHHHHhhccccccccccccc
Q 038158 84 TKSYLI------SDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 84 ~~~~l~------~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
+++.+. .+|++||||||||||+++|||.+|.+.
T Consensus 348 ~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA 386 (785)
T 3s9v_A 348 ENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEA 386 (785)
T ss_dssp TTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred cCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHH
Confidence 643331 589999999999999999999988754
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=99.96 E-value=2.1e-30 Score=229.76 Aligned_cols=102 Identities=26% Similarity=0.416 Sum_probs=87.1
Q ss_pred CCccchhhHHHHHHhcCCccchHHHHHHHHHHHHhhcCCCccc----ccCCchhhhhHHhhhhhhc------cccccccc
Q 038158 14 TKPLHQLELIDTLQGLGLAYHFESEIRNILRNIYNKNKDDKWK----KENVRVHATSLEFGLLRQH------EVFNGFKE 83 (123)
Q Consensus 14 ~~~~~~L~lID~LqRLGi~yhFe~EI~~~L~~i~~~~~~~~~~----~~~~dL~~~AL~FRLLRqh------DvF~~F~d 83 (123)
.+++++|++||+||||||+|||++||+++|+++|+.|...+.+ ....||++|||+||||||| |||++|++
T Consensus 243 ~d~~e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~tAL~FRLLRqhGy~VS~DvF~~Fk~ 322 (727)
T 3pya_A 243 VDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNFEK 322 (727)
T ss_dssp CHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHHHHHHHHHHHTTCCCCGGGGGGGEE
T ss_pred CcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHHHHHHHHHHhCCCCCCHHHHHhccC
Confidence 5789999999999999999999999999999999987643321 1236999999999999999 99999984
Q ss_pred C---C---cccccCchHHHHHHHHhhccccccccccccc
Q 038158 84 T---K---SYLISDDFNGILSLYVASYYSLIRRRKRHGE 116 (123)
Q Consensus 84 ~---~---~~l~~~D~~glLsLYeAS~L~~~gE~~l~~e 116 (123)
+ + +.. .+|++|||+||||||+++|||.+|.+.
T Consensus 323 ~G~F~~~~~e~-~~Dv~glLsLYeAS~l~~~gE~iLdeA 360 (727)
T 3pya_A 323 EGEFFCFVGQS-NQAVTGMFNLYRASQLAFPREEILKNA 360 (727)
T ss_dssp TTEECSSTTCC-CCCHHHHHHHHHHHTTCCTTCHHHHHH
T ss_pred CCccccccccc-ccccHHHHHHHHHHHcCCCchHHHHHH
Confidence 3 2 233 579999999999999999999988653
No 11
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=65.98 E-value=2.3 Score=26.19 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=23.0
Q ss_pred cHHHHHHHHhhcCCccchhhHHHHHHhc
Q 038158 2 QKGKVKTITNDATKPLHQLELIDTLQGL 29 (123)
Q Consensus 2 lkeeVr~ml~~~~~~~~~L~lID~LqRL 29 (123)
|.+|||.-|..+.+.++++.+..+||-|
T Consensus 21 lIeE~Rh~Lk~TensfeQItfmqalQLl 48 (58)
T 1pd3_A 21 LIEEVRHRLKITENSFEQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHTCCCCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHH
Confidence 4678888887788999999999888864
No 12
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=22.54 E-value=73 Score=19.94 Aligned_cols=26 Identities=31% Similarity=0.566 Sum_probs=21.6
Q ss_pred cchhhHHHHHHhcCCccchHHHHHHHHHH
Q 038158 17 LHQLELIDTLQGLGLAYHFESEIRNILRN 45 (123)
Q Consensus 17 ~~~L~lID~LqRLGi~yhFe~EI~~~L~~ 45 (123)
+.+|.+|-.++.+|++= +||+.+|+.
T Consensus 3 l~rL~~I~~lr~lGfsL---~eIk~~l~~ 28 (99)
T 1q08_A 3 LQRLKFIRHARQLGFSL---ESIRELLSI 28 (99)
T ss_dssp HHHHHHHHHHHHTTCCH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCH---HHHHHHHHH
Confidence 56799999999999884 788888864
No 13
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=21.03 E-value=96 Score=18.74 Aligned_cols=27 Identities=22% Similarity=0.233 Sum_probs=22.3
Q ss_pred CccchhhHHHHHHhcCCccchHHHHHHHHH
Q 038158 15 KPLHQLELIDTLQGLGLAYHFESEIRNILR 44 (123)
Q Consensus 15 ~~~~~L~lID~LqRLGi~yhFe~EI~~~L~ 44 (123)
-..+.+.||...+++|++ -+||.+.|.
T Consensus 11 ~d~ewl~LI~~Ak~lGls---leEIrefL~ 37 (57)
T 1b0n_B 11 LDQEWVELMVEAKEANIS---PEEIRKYLL 37 (57)
T ss_dssp CCHHHHHHHHHHHHTTCC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCC---HHHHHHHHH
Confidence 356789999999999998 478888774
Done!