BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 038160
         (270 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
           thaliana GN=At4g11170 PE=2 SV=1
          Length = 1095

 Score = 33.1 bits (74), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 22/149 (14%)

Query: 36  LTRLVVWYCDKLKYIFSASMIGNLKQLQHLELTTLRLQGLPKLRCLYPGMHTSEWPALEI 95
           L RL + +C+ L       +  ++K LQHL L  L +    KL  +   ++    P+LE+
Sbjct: 656 LNRLDLGWCESL-----VELPSSIKNLQHLIL--LEMSCCKKLEIIPTNINL---PSLEV 705

Query: 96  LSVHRCDKLKIFTEDLSQNNENDQLGIPAQQPPLPLE-----KEGCLEKHLGKLAMIKEL 150
           L    C +L+ F E  +     + +G    + P  ++      E C+E+     A +K L
Sbjct: 706 LHFRYCTRLQTFPEISTNIRLLNLIGTAITEVPPSVKYWSKIDEICMER-----AKVKRL 760

Query: 151 KLYRPYHLKQLC-KQDSKLGPIFQYLEIL 178
            ++ PY L++LC +++ +L  I +YL+ L
Sbjct: 761 -VHVPYVLEKLCLRENKELETIPRYLKYL 788


>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
          Length = 418

 Score = 32.7 bits (73), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 26/129 (20%)

Query: 145 AMIKELKLYRPYHLKQLCKQ--DSKLGPIFQYLEILGVYHSQSLLILLPSSSVSFRNLAK 202
           A ++E+   R  +L  LCKQ  DS LG I QYL+ L V      L L   S+++   L  
Sbjct: 111 AFVQEIGSLRALNLS-LCKQITDSSLGRIAQYLKGLEV------LELGGCSNITNTGLL- 162

Query: 203 LVAFGCKELIHLVTSSTAKTLVRLVKVQVYGCRAMTEVVINDKDGVEKEEIVFC-KLKTL 261
           L+A+G               L RL  + +  CR +++V I    G+ +     C  L+ L
Sbjct: 163 LIAWG---------------LQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQL 207

Query: 262 QLFDLDSLT 270
            L D   LT
Sbjct: 208 TLQDCQKLT 216


>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
          Length = 400

 Score = 32.7 bits (73), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 26/129 (20%)

Query: 145 AMIKELKLYRPYHLKQLCKQ--DSKLGPIFQYLEILGVYHSQSLLILLPSSSVSFRNLAK 202
           A ++E+   R  +L  LCKQ  DS LG I QYL+ L V      L L   S+++   L  
Sbjct: 111 AFVQEIGSLRALNLS-LCKQITDSSLGRIAQYLKGLEV------LELGGCSNITNTGLL- 162

Query: 203 LVAFGCKELIHLVTSSTAKTLVRLVKVQVYGCRAMTEVVINDKDGVEKEEIVFC-KLKTL 261
           L+A+G               L RL  + +  CR +++V I    G+ +     C  L+ L
Sbjct: 163 LIAWG---------------LQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQL 207

Query: 262 QLFDLDSLT 270
            L D   LT
Sbjct: 208 TLQDCQKLT 216


>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
          Length = 400

 Score = 32.7 bits (73), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 26/129 (20%)

Query: 145 AMIKELKLYRPYHLKQLCKQ--DSKLGPIFQYLEILGVYHSQSLLILLPSSSVSFRNLAK 202
           A ++E+   R  +L  LCKQ  DS LG I QYL+ L V      L L   S+++   L  
Sbjct: 111 AFVQEIGSLRALNLS-LCKQITDSSLGRIAQYLKGLEV------LELGGCSNITNTGLL- 162

Query: 203 LVAFGCKELIHLVTSSTAKTLVRLVKVQVYGCRAMTEVVINDKDGVEKEEIVFC-KLKTL 261
           L+A+G               L RL  + +  CR +++V I    G+ +     C  L+ L
Sbjct: 163 LIAWG---------------LQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQL 207

Query: 262 QLFDLDSLT 270
            L D   LT
Sbjct: 208 TLQDCQKLT 216


>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
           thaliana GN=At5g47260 PE=3 SV=2
          Length = 948

 Score = 32.7 bits (73), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)

Query: 36  LTRLVVWYCDKLKYIFSA----SMIGNLKQLQHLELTTLRLQGLPKLRCLYPGMHTSEWP 91
           L  L V  C +++ + S     + +GN  +     LT L L GLPKL  +Y       +P
Sbjct: 746 LGELSVSECPQMEEVISKDKAMAKLGNTSEQPFQNLTKLVLDGLPKLESIY--WTPLPFP 803

Query: 92  ALEILSVHRCDKLK 105
            LE L + RC +L+
Sbjct: 804 VLEYLVIRRCPELR 817


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.138    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,561,517
Number of Sequences: 539616
Number of extensions: 3633886
Number of successful extensions: 7912
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7906
Number of HSP's gapped (non-prelim): 13
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)