BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038161
(54 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ARD5|LT02_HORVU Low temperature-induced protein lt101.2 OS=Hordeum vulgare
GN=LT101.2 PE=2 SV=1
Length = 54
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 49/54 (90%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
M S TF+EVILAI+LPPVGVFLRYG VEFWICLLLT+LGYIPGIIYA+YVLV
Sbjct: 1 MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLVA 54
>sp|P68179|LT01_HORVU Low temperature-induced protein lt101.1 OS=Hordeum vulgare
GN=LT101.1 PE=2 SV=1
Length = 54
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 49/53 (92%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
MGS T LEVILAI+LPPVGVFLRY GVEFWICLLLT+LGYIPGIIYA+YVLV
Sbjct: 1 MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|P68178|ESI3_LOPEL Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum
elongatum GN=ESI3 PE=2 SV=1
Length = 54
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 49/53 (92%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
MGS T LEVILAI+LPPVGVFLRY GVEFWICLLLT+LGYIPGIIYA+YVLV
Sbjct: 1 MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53
>sp|Q9ZNQ7|RCI2A_ARATH Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2
SV=1
Length = 54
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
M + TF+++I+AILLPP+GVFLR+GCGVEFWICL+LT+LGYIPGIIYAIYVL
Sbjct: 1 MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52
>sp|Q9ZNS6|RCI2B_ARATH Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2
SV=1
Length = 54
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 48/53 (90%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
M + TF+E+ILAI+LPP+GVFL++GC VEFWICL+LT+ GY+PGI+YA+Y++
Sbjct: 1 MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIIT 53
>sp|Q9LRI7|OSR8_ORYSJ Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8
PE=3 SV=1
Length = 72
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 47/51 (92%), Gaps = 1/51 (1%)
Query: 5 TFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLVG 54
TFLE++LAI+LPP+GVFLR+GC +EF ICLLLT+LGY+PGIIYA+YVLV
Sbjct: 8 TFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVA 58
>sp|Q0DKW8|LTI6B_ORYSJ Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica
GN=LTI6B PE=2 SV=1
Length = 55
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
G+ +++++AI+LPP+GVFL++GCG EFWICLLLT LGYIPGIIYAIY +
Sbjct: 3 GTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAIT 54
>sp|A2Y075|LTI6B_ORYSI Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B
PE=3 SV=2
Length = 55
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 2 GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
G+ +++++AI+LPP+GVFL++GCG EFWICLLLT LGYIPGIIYAIY +
Sbjct: 3 GTANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAIT 54
>sp|Q8H5T6|LTI6A_ORYSJ Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica
GN=LTI6A PE=2 SV=1
Length = 56
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 45/52 (86%)
Query: 2 GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
+ T +++ILAI+LPP+GVF ++GCG+EFWICLLLT GY+PGIIYA++V+
Sbjct: 4 STATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVIT 55
>sp|Q9FE70|RC21_ARATH UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana
GN=At1g57550 PE=2 SV=1
Length = 52
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%), Gaps = 2/52 (3%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
MGS FLEV+ AI +PPVGVFLRYG G+EFW+CLLLT+ +IPG+IYAIYVL
Sbjct: 1 MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50
>sp|Q9M095|RC23_ARATH UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana
GN=At4g30650 PE=3 SV=1
Length = 73
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%), Gaps = 1/51 (1%)
Query: 4 ETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLV 53
E F E+++AILLPP+GV L+ GC VEF ICL+LT+LGYIPGIIYA+YV+V
Sbjct: 6 EVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56
>sp|Q9SUI0|RC24_ARATH UPF0057 membrane protein At4g30660 OS=Arabidopsis thaliana
GN=At4g30660 PE=2 SV=1
Length = 74
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Query: 2 GSETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVLV 53
E E+I+AILLPP+GV R GC VEF ICL+LT+LGY+PGIIYAIYV+V
Sbjct: 4 NCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIV 56
>sp|Q4HXT6|PMP3_GIBZE Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3
SV=2
Length = 57
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 43/51 (84%)
Query: 3 SETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
+ ++ILAI+LPPVGVFL GCG +F+I +LLT+LGYIPGII+A+Y+++
Sbjct: 5 ASDICKIILAIILPPVGVFLERGCGADFFINILLTILGYIPGIIHALYIIL 55
>sp|O82232|RC22_ARATH UPF0057 membrane protein At2g24040 OS=Arabidopsis thaliana
GN=At2g24040 PE=3 SV=1
Length = 75
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 2 GSETFLEVILAILLPPVGVFLRYGC-GVEFWICLLLTVLGYIPGIIYAIYVL 52
E E+ +AILLPPVGV LR+GC VEF+ICL+LT LGY+PGIIYAIY +
Sbjct: 4 SCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55
>sp|Q22700|YCU3_CAEEL UPF0057 membrane protein T23F2.3 OS=Caenorhabditis elegans
GN=T23F2.3 PE=3 SV=1
Length = 57
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 8 EVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
+ I A+LLPP+GVFL GC IC+LLT+LGYIPGIIYA YV++
Sbjct: 10 KFICAVLLPPIGVFLEKGCDYHLAICILLTILGYIPGIIYACYVILA 56
>sp|Q22701|YCU4_CAEEL UPF0057 membrane protein T23F2.4 OS=Caenorhabditis elegans
GN=T23F2.4 PE=3 SV=2
Length = 57
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 8 EVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
+ + A+LLPPVGVFL GC IC+LLT+LGYIPGIIYA Y+++
Sbjct: 10 KFLFALLLPPVGVFLEKGCTHHLAICILLTILGYIPGIIYACYIILA 56
>sp|Q871V2|PMP3_NEUCR Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pmp-3 PE=3 SV=1
Length = 57
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 41/51 (80%)
Query: 3 SETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
+ ++I+A++LPP+GVF GCG + +I +LLT+LGY+PGI++A+Y+++
Sbjct: 5 ASDICKIIVAVILPPLGVFFERGCGADLFINILLTILGYLPGIVHALYIIL 55
>sp|Q9C1W4|PMP3_SCHPO Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2
Length = 57
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Query: 2 GSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
GS+ F +VI AI+LPP+GVFL GCG + I +LL LGY+PGII+A+Y+++
Sbjct: 5 GSDIF-KVIFAIILPPLGVFLERGCGADVIINILLCCLGYVPGIIHALYIIL 55
>sp|Q6BVN0|PMP3_DEBHA Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 15 LPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
LPP+GVFL GC FWI ++LT+LGYIPGII+A+YV++
Sbjct: 17 LPPLGVFLERGCASSFWINIVLTILGYIPGIIHALYVIL 55
>sp|Q4WYA5|PMP3_ASPFU Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=pmp3 PE=3 SV=1
Length = 57
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 3 SETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
+ +++ AI+LPP+GVFL GCG + I + LT+LG+IPGII+A Y++
Sbjct: 5 ASDICKILFAIILPPLGVFLERGCGADLLINICLTILGWIPGIIHAFYII 54
>sp|Q9Y068|RIC1_PHYIN Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1
Length = 57
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 8 EVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
+I ++++PPVGVF + GC + I LLTVLGYIPG+I+A+Y+L+
Sbjct: 10 RLICSVIIPPVGVFFQVGCTKDLAINCLLTVLGYIPGVIHAVYILI 55
>sp|Q9P824|PMP3_CANAX Plasma membrane proteolipid 3 homolog OS=Candida albicans GN=PMP3
PE=3 SV=1
Length = 55
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
M SE +EVI+AI LPPV VF++ G WI L+L + + P I++A+YV++
Sbjct: 1 MNSEKIIEVIIAIFLPPVAVFMKCGATTPLWINLVLCIFIWFPAILHALYVVLK 54
>sp|P74805|Y1169_SYNY3 UPF0057 membrane protein ssr1169 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssr1169 PE=3 SV=2
Length = 54
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
Query: 8 EVILAILLPPVGVFLRYGCGVEFWICLLLTVLG-YIPGIIYAIYVL 52
++I AILLPP+GVFL+ G G +FWI LLLT+ G YI G+++AI+V+
Sbjct: 5 KIICAILLPPLGVFLQVGIGKDFWINLLLTIFGLYILGLVHAIWVI 50
>sp|Q9I5W9|Y567_PSEAE UPF0057 membrane protein PA0567 OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA0567
PE=3 SV=1
Length = 52
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 32/38 (84%)
Query: 16 PPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
PP+GVFL+ G G FW+ +LLT+LGYIPGI++A+Y++
Sbjct: 13 PPLGVFLQVGFGGAFWLNILLTLLGYIPGIVHAVYIIA 50
>sp|Q75C38|PMP3_ASHGO Plasma membrane proteolipid 3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PMP3
PE=3 SV=1
Length = 55
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
M S + VI+AI LPPV VFL G GVE + LLLT+ + PG++YA+Y++
Sbjct: 1 MNSTKVVNVIIAIFLPPVAVFLARGWGVECIVDLLLTIFFFFPGMLYALYIV 52
>sp|P0CS18|PMP3_CRYNJ Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PMP3 PE=3 SV=1
Length = 57
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 3 SETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
S+ F ++ILAI+LPP+GVFL GCG + I +LLT+LGYIPGII+A+Y+++
Sbjct: 6 SDIF-KIILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYIIL 55
>sp|P0CS19|PMP3_CRYNB Plasma membrane proteolipid 3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PMP3 PE=3
SV=1
Length = 57
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 3 SETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLV 53
S+ F ++ILAI+LPP+GVFL GCG + I +LLT+LGYIPGII+A+Y+++
Sbjct: 6 SDIF-KIILAIILPPLGVFLERGCGADLLINILLTILGYIPGIIHALYIIL 55
>sp|Q22702|YCU5_CAEEL UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans
GN=T23F2.5 PE=3 SV=1
Length = 57
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 8 EVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVLVG 54
+ + A+LLPP+GV+L GC I +LLT+LGYIPGII+A YV++
Sbjct: 10 KFLCALLLPPIGVWLEKGCTYHLAINILLTILGYIPGIIHACYVILA 56
>sp|P87284|PMP3_YEAST Plasma membrane proteolipid 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PMP3 PE=1 SV=1
Length = 55
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 1 MGSETFLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYV 51
M S + +IL++ LPPV VFL G G + + ++LT+L + PG++YA+Y+
Sbjct: 1 MDSAKIINIILSLFLPPVAVFLARGWGTDCIVDIILTILAWFPGMLYALYI 51
>sp|P34655|YOT0_CAEEL UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans
GN=ZK632.10 PE=3 SV=2
Length = 80
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 10 ILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYVL 52
ILAI LPP+ V L GC + I +LLT LG IPGII+A Y++
Sbjct: 8 ILAIFLPPIAVLLDVGCNCDLLINILLTCLGIIPGIIHAWYII 50
>sp|P0AE42|YQAE_ECOLI UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12)
GN=yqaE PE=3 SV=1
Length = 52
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 6 FLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYV 51
F +++ I+LPP+GV L G G F I +LLT+LGYIPG+I+A +V
Sbjct: 3 FWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWV 48
>sp|P0AE43|YQAE_ECOL6 UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1
Length = 52
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 6 FLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYV 51
F +++ I+LPP+GV L G G F I +LLT+LGYIPG+I+A +V
Sbjct: 3 FWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWV 48
>sp|P0AE44|YQAE_ECO57 UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE
PE=3 SV=1
Length = 52
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 6 FLEVILAILLPPVGVFLRYGCGVEFWICLLLTVLGYIPGIIYAIYV 51
F +++ I+LPP+GV L G G F I +LLT+LGYIPG+I+A +V
Sbjct: 3 FWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIHAFWV 48
>sp|Q17638|YAM5_CAEEL UPF0057 membrane protein C04G6.5 OS=Caenorhabditis elegans
GN=C04G6.5 PE=3 SV=1
Length = 59
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2 GSETFLEVILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYV 51
++ +EVIL I LPP+ ++ C + I ++ +L ++PGI+YA+Y+
Sbjct: 4 DADVIIEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVYI 54
>sp|Q20516|YV31_CAEEL UPF0057 membrane protein F47B7.1 OS=Caenorhabditis elegans
GN=F47B7.1 PE=3 SV=1
Length = 59
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 4 ETFLEVILAILLPPVGVFLR-YGCGVEFWICLLLTVLGYIPGIIYAIY 50
+ +E+ILAI LPP+ +F+ C + + ++L ++P +I+A++
Sbjct: 6 QQIIELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53
>sp|Q07549|SNA4_YEAST Protein SNA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SNA4 PE=1 SV=1
Length = 140
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 4 ETFLEVILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYVLV 53
F+ I+A PP V LR G C +F + +LLT+LG++PG+++A Y +
Sbjct: 11 SDFILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFYYIT 61
>sp|O74837|PMP31_SCHPO Plasma membrane proteolipid 31 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pmp31 PE=1 SV=2
Length = 109
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 4 ETFLEVILAILLPPVGVFLRYG-CGVEFWICLLLTVLGYIPGIIYAIYVLV 53
FL ++L+ +P + V +R G C +F I + L LG IPGII+AIY+++
Sbjct: 7 SDFLLIVLSFFVPFIVVGIRRGFCTADFLINICLCALG-IPGIIHAIYIVI 56
>sp|Q2HAR0|PMP3_CHAGB Plasma membrane proteolipid 3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=PMP3 PE=3 SV=1
Length = 53
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 8 EVILAILLPPVGVFLRYGCGVE 29
++I A++LPP+GVFL GC +
Sbjct: 10 KIIFAVILPPLGVFLERGCNSD 31
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.335 0.158 0.516
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,388,291
Number of Sequences: 539616
Number of extensions: 563397
Number of successful extensions: 1562
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1520
Number of HSP's gapped (non-prelim): 42
length of query: 54
length of database: 191,569,459
effective HSP length: 27
effective length of query: 27
effective length of database: 176,999,827
effective search space: 4778995329
effective search space used: 4778995329
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 55 (25.8 bits)