BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038167
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S2T1|DDPS6_ARATH Dehydrodolichyl diphosphate synthase 6 OS=Arabidopsis thaliana
GN=At2g17570 PE=2 SV=2
Length = 295
Score = 342 bits (877), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 225/290 (77%), Gaps = 3/290 (1%)
Query: 3 RQVGAEESKLCRKLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRA 62
R +G S+L ++ F R+ +F ++S+G IP HIAFI+DGNRR+AKK L +G+GH+A
Sbjct: 9 RHIGGRMSQLLEQIYGFSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLL-DGSGHKA 67
Query: 63 GFLTLMSLLKYCAELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSK 122
GF LMS+L+YC EL +KYV+IYAFSIDNF+R E+ +MDLMLEK++ LL ++ + +
Sbjct: 68 GFSALMSMLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQ 127
Query: 123 YGVRVCFIGNLGLVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVT 182
YG+RV FIGNL L+++ +R AEKVM+AT+KN+R+V+LIC+AY+ST+EIV V+++C +
Sbjct: 128 YGIRVYFIGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSC-IN 186
Query: 183 KKTQPQAFKPRNPQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENR 242
K +A ++ +D + + +N+E+ I+LVD+E++M M V PNPDILIR+SGE R
Sbjct: 187 KSDNIEASNYKHEDSDSDIEGTDMENQEKK-IQLVDIEENMQMSVAPNPDILIRSSGETR 245
Query: 243 LSNFLLWQSSNCMLYSPAALWPEIGLRHLIWAILNFQRHHAYLEKKKKQL 292
LSNFLLWQ+ N L SPAALWPEIGLRHL+WAILNFQR+H+YLEK+KKQL
Sbjct: 246 LSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAILNFQRNHSYLEKRKKQL 295
>sp|Q8W3U4|HRT2_HEVBR Rubber cis-polyprenyltransferase HRT2 OS=Hevea brasiliensis GN=HRT2
PE=1 SV=1
Length = 284
Score = 308 bits (789), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/288 (52%), Positives = 208/288 (72%), Gaps = 12/288 (4%)
Query: 7 AEESKLCRKLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLT 66
E + R LG +MRK ++ IL+ G IP HIAFILDGN RFAKKH L EG GH+AGFL
Sbjct: 6 GERPSVFRLLGKYMRKGLYSILTQGPIPTHIAFILDGNGRFAKKHKLP-EGGGHKAGFLA 64
Query: 67 LMSLLKYCAELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVR 126
L+++L YC EL VKY +IYAFSIDNF+R +E++Y+M+LMLEK+E ++ E+ ++ Y +
Sbjct: 65 LLNVLTYCYELGVKYATIYAFSIDNFRRKPHEVQYVMNLMLEKIEGMIMEESIINAYDIC 124
Query: 127 VCFIGNLGLVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQ 186
V F+GNL L+ EP++ A+K+MRAT+KN++ V+L+ + Y+ST+EIVH VEE +
Sbjct: 125 VRFVGNLKLLDEPLKTAADKIMRATAKNSKFVLLLAVCYTSTDEIVHAVEE-------SS 177
Query: 187 PQAFKPRNPQNDVTEDA--DEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLS 244
K ND D + + + IKLV+LE++ Y+ P PD+LIRTSGE RLS
Sbjct: 178 KDKLKSDEICNDGNGDCVIKIEEMEPYSEIKLVELERNTYIN--PYPDVLIRTSGETRLS 235
Query: 245 NFLLWQSSNCMLYSPAALWPEIGLRHLIWAILNFQRHHAYLEKKKKQL 292
N+LLWQ++NC+LYSP ALWPEIGLRH++WA++N QRH++YLEK K+ L
Sbjct: 236 NYLLWQTTNCILYSPHALWPEIGLRHVVWAVINCQRHYSYLEKHKEYL 283
>sp|Q8LAR7|DDPS8_ARATH Dehydrodolichyl diphosphate synthase 8 OS=Arabidopsis thaliana
GN=At5g60510 PE=2 SV=2
Length = 272
Score = 258 bits (660), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/288 (43%), Positives = 185/288 (64%), Gaps = 22/288 (7%)
Query: 3 RQVGAEESKLCRKLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRA 62
R+ E +++ L MRK +F +L VG IP +I+FI+DGNRRFAKK NL G AGHRA
Sbjct: 5 REEVGEFTQIFNALMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAGHRA 64
Query: 63 GFLTLMSLLKYCAELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSK 122
GF+++ +L+YC E+ V YV++YAF +DNFKR E++ +MDLMLEK+E + + +
Sbjct: 65 GFISVKYILQYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVSGNM 124
Query: 123 YGVRVCFIGNLGLVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVT 182
GVR+ F G+L ++E R +K+M T +N +++++C+AYS++ EIVH V ++C+
Sbjct: 125 NGVRIIFAGDLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVHAVRDSCVRK 184
Query: 183 KKTQPQAFKPRNPQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENR 242
KT + + ++L D+E+ MY V P PD+++RT G +R
Sbjct: 185 SKTGDGS----------------------SALELSDIEECMYTSVVPVPDLVVRTGGGDR 222
Query: 243 LSNFLLWQSSNCMLYSPAALWPEIGLRHLIWAILNFQRHHAYLEKKKK 290
LSNF+ WQ+S +L+ ALWPE+GL HL+WAIL FQR YL+KKKK
Sbjct: 223 LSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQRMQDYLQKKKK 270
>sp|Q8LED0|DDPS7_ARATH Dehydrodolichyl diphosphate synthase 7 OS=Arabidopsis thaliana
GN=At5g60500 PE=2 SV=1
Length = 271
Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 181/283 (63%), Gaps = 22/283 (7%)
Query: 8 EESKLCRKLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTL 67
E + + L MRK +F +L VG IP +I+FI+DGNRRFAKKHNL G AGHRAGF+++
Sbjct: 9 ESTHIFNALMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISV 68
Query: 68 MSLLKYCAELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRV 127
+L+YC E+ V YV+++AF +DNFKR E++ +MDLMLEK+E + + + GVR+
Sbjct: 69 KYILQYCKEIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRI 128
Query: 128 CFIGNLGLVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQP 187
F G+L ++E R +K+M T +N +++++C+AYS++ EIVH V ++C+
Sbjct: 129 IFAGDLDSLNEHFRAATKKLMELTEENRDLIVVVCVAYSTSLEIVHAVRKSCV------- 181
Query: 188 QAFKPRNPQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFL 247
R N + ++L D+E+ MY + P PD++IRT G +RLSNF+
Sbjct: 182 -----RKCTN----------GDDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFM 226
Query: 248 LWQSSNCMLYSPAALWPEIGLRHLIWAILNFQRHHAYLEKKKK 290
WQ+S +L+ ALWPE+GL HL+WAIL FQR YL KKKK
Sbjct: 227 TWQTSRSLLHRTEALWPELGLWHLVWAILKFQRMQDYLTKKKK 269
>sp|Q99KU1|DHDDS_MOUSE Dehydrodolichyl diphosphate synthase OS=Mus musculus GN=Dhdds PE=2
SV=1
Length = 333
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 158/276 (57%), Gaps = 26/276 (9%)
Query: 15 KLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYC 74
+L ++ R C I+ G +P HIAFI+DGNRR+AKK + + GH GF L L++C
Sbjct: 8 ELSLWERFCA-NIIKAGPVPKHIAFIMDGNRRYAKKCQVERQ-EGHTQGFNKLAETLRWC 65
Query: 75 AELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLG 134
L + V++YAFSI+NFKR+++E+ L+DL +K L+ E L K+GV + +G+L
Sbjct: 66 LNLGILEVTVYAFSIENFKRSKSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLH 125
Query: 135 LVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRN 194
L+ ++ ++AT + + +C AY+S EI + V E ++ +P
Sbjct: 126 LLPLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANAVREMAWGVEQG---LLEP-- 180
Query: 195 PQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSS-N 253
+DV+E L+K +Y P+PDILIRTSGE RLS+FLLWQ+S +
Sbjct: 181 --SDVSESL---------------LDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHS 223
Query: 254 CMLYSPAALWPEIGLRHLIWAILNFQRHHAYLEKKK 289
C+++ P LWPE +L AIL FQR+H L+K +
Sbjct: 224 CLVFQP-VLWPEYTFWNLCEAILQFQRNHGALQKAR 258
>sp|Q86SQ9|DHDDS_HUMAN Dehydrodolichyl diphosphate synthase OS=Homo sapiens GN=DHDDS PE=1
SV=3
Length = 333
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 158/276 (57%), Gaps = 26/276 (9%)
Query: 15 KLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYC 74
+L ++ R C I+ G +P HIAFI+DGNRR+AKK + + GH GF L L++C
Sbjct: 8 ELSLWERFCA-NIIKAGPMPKHIAFIMDGNRRYAKKCQVERQ-EGHSQGFNKLAETLRWC 65
Query: 75 AELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLG 134
L + V++YAFSI+NFKR+++E+ LMDL +K L+ E L K+GV + +G+L
Sbjct: 66 LNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLH 125
Query: 135 LVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRN 194
L+ ++ + ++AT + + +C AY+S EI + V E ++ P
Sbjct: 126 LLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQG---LLDP-- 180
Query: 195 PQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSS-N 253
+D++E L+K +Y P+PDILIRTSGE RLS+FLLWQ+S +
Sbjct: 181 --SDISESL---------------LDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHS 223
Query: 254 CMLYSPAALWPEIGLRHLIWAILNFQRHHAYLEKKK 289
C+++ P LWPE +L AIL FQ +H+ L+K +
Sbjct: 224 CLVFQP-VLWPEYTFWNLFEAILQFQMNHSVLQKAR 258
>sp|Q8RA26|ISPT_THETN Isoprenyl transferase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=uppS PE=3
SV=1
Length = 247
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 142/247 (57%), Gaps = 26/247 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+ I+DGN R+A+K + GH+AG + +++ C EL +KY+++YAFS +N+
Sbjct: 18 LPQHVGIIMDGNGRWAQKRGMP-RVYGHKAGVNAVREVIRSCRELGIKYLTLYAFSTENW 76
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR + E+ +LMDL++E +L +E L+K V V FIG++ + E ++ EK + T
Sbjct: 77 KRPKEEVDFLMDLLVE---YLSKEVDELNKNNVVVKFIGDISRLPEKCQIEIEKAQKLTE 133
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
KNT +V+ I L Y +EIV + C KK + P D+TED
Sbjct: 134 KNTGLVVNIALNYGGRDEIVKATQNIC---KKVLNRELSP----EDITEDT--------- 177
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+ +H+Y P+PD++IRTSGE RLSNFLLWQS+ L+ LWP+ RHLI
Sbjct: 178 ------ITQHLYTASQPDPDLIIRTSGEKRLSNFLLWQSAYSELWFTEVLWPDFKKRHLI 231
Query: 273 WAILNFQ 279
A+L +Q
Sbjct: 232 EALLYYQ 238
>sp|P35196|RER2_YEAST Dehydrodolichyl diphosphate synthase RER2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RER2 PE=1
SV=1
Length = 286
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 37/262 (14%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+ FI+DGNRRFA+K + + GH AGF+++ +L+ C E V +++AFSI+NF
Sbjct: 31 VPRHVGFIMDGNRRFARKKEMDVK-EGHEAGFVSMSRILELCYEAGVDTATVFAFSIENF 89
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVS----EPIRVTAEKVM 148
KR+ E+ LM L E++ + KYGVR+ IG+L L+ E +RV E
Sbjct: 90 KRSSREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVE--- 146
Query: 149 RATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKN 208
T N R + IC Y+ EEI+H ++ET + ++
Sbjct: 147 -TTKNNKRATLNICFPYTGREEILHAMKETIV--------------------------QH 179
Query: 209 KEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSN--CMLYSPAALWPEI 266
K+ I LE H+Y P D+LIRTSG +RLS+FL+WQ+S+ + LWPE
Sbjct: 180 KKGAAIDESTLESHLYTAGVPPLDLLIRTSGVSRLSDFLIWQASSKGVRIELLDCLWPEF 239
Query: 267 GLRHLIWAILNFQRHHAYLEKK 288
G + W +L F H ++L K+
Sbjct: 240 GPIRMAWILLKFSFHKSFLNKE 261
>sp|Q8GDY3|ISPT_HELMO Isoprenyl transferase OS=Heliobacillus mobilis GN=uppS PE=3 SV=1
Length = 260
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 135/247 (54%), Gaps = 26/247 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IP HIA I+DGN R+AK+ L AGHRAG +L +L+ C + ++ Y+++YAFS +N+
Sbjct: 29 IPKHIAIIMDGNGRWAKRRGLP-RVAGHRAGVESLRRVLEVCEDYNIAYLTVYAFSTENW 87
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR +E+ L DL++E +L RE L GVR+ IG + + R EK + T+
Sbjct: 88 KRPADEVNALFDLLVE---YLHRELNTLHSKGVRIRAIGKIEDLPGGPRRELEKAIAKTA 144
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NTR+V+ + L Y EIV V+ + + + V D + K Q
Sbjct: 145 NNTRLVLNVALNYGGRFEIVEAVKSIARLAAEGK------------VNPDQIDEKYMSQ- 191
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
++Y P+PD+LIR SGE RLSNFLLWQS+ ++ LWP+ G + ++
Sbjct: 192 ---------YLYTADVPDPDLLIRPSGELRLSNFLLWQSAYTEIWVTPTLWPDFGRKEMV 242
Query: 273 WAILNFQ 279
AI+++Q
Sbjct: 243 QAIVDYQ 249
>sp|O87197|ISPT_THET2 Isoprenyl transferase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=uppS PE=3 SV=1
Length = 263
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 127/249 (51%), Gaps = 20/249 (8%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G +P H+ ILDGNRR+A+ L+ GH G +L++C E+ +K V+++ FS D
Sbjct: 27 GPMPRHLGLILDGNRRYARALGLS-PTKGHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTD 85
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
NFKR E+ LM+L L + E + ED + ++ VRV FIG S + E++ R
Sbjct: 86 NFKRPPEEVETLMNLFLREAERMA-EDHRILEHQVRVRFIGRREGFSPEVVRAIERLERR 144
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T + + + I L Y EEIV V+ L + + + P+ +T +
Sbjct: 145 TEGHRGMFLNIALGYGGREEIVDAVKRLLL---EAEARGLSPKEVAEGLTPE-------- 193
Query: 211 QNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
D+ +H+Y P+PD +IRTSGE RLS FLLWQS+ Y LWPE
Sbjct: 194 -------DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKID 246
Query: 271 LIWAILNFQ 279
+ A+ ++Q
Sbjct: 247 FLRALRSYQ 255
>sp|Q5SH15|ISPT_THET8 Isoprenyl transferase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=uppS PE=3 SV=1
Length = 263
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 12 LCRKLGVFMRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLL 71
L R L K + + G +P H+ ILDGNRR+A+ L+ GH G +L
Sbjct: 8 LSRPLYWLYEKRLLREVKRGPMPRHLGLILDGNRRYARALGLS-PTKGHEFGVQKAYEVL 66
Query: 72 KYCAELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIG 131
++C E+ +K V+++ FS DNFKR E+ LM+L L + E + ED + ++ VRV FIG
Sbjct: 67 EWCLEMGIKTVTVWVFSTDNFKRPPEEVETLMNLFLREAERMA-EDHRILEHQVRVRFIG 125
Query: 132 NLGLVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFK 191
S + E++ R T + + + I + Y EEIV V+ L + + +
Sbjct: 126 RREGFSPEVVRAIERLERRTEGHRGMFLNIAMGYGGREEIVDAVKRLLL---EAEARGLS 182
Query: 192 PRNPQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQS 251
P+ +T + D+ +H+Y P+PD +IRTSGE RLS FLLWQS
Sbjct: 183 PKEVAEGLTPE---------------DIARHLYTAGLPDPDFIIRTSGEIRLSGFLLWQS 227
Query: 252 SNCMLYSPAALWPEIGLRHLIWAILNFQ 279
+ Y LWPE + A+ ++Q
Sbjct: 228 AYSEFYFADVLWPEFRKIDFLRALRSYQ 255
>sp|Q8XJQ9|ISPT_CLOPE Isoprenyl transferase OS=Clostridium perfringens (strain 13 / Type
A) GN=uppS PE=3 SV=1
Length = 253
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 126/247 (51%), Gaps = 26/247 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P HIA I+DGN R+AKK L GHRAG T+ +++K C +L VKY+++YAFS +N+
Sbjct: 23 MPKHIAIIMDGNGRWAKKRGLP-RTMGHRAGVKTIKTIVKECDKLGVKYLTLYAFSTENW 81
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR ++E+ LM L++ EF+ E L + GVRV IG+L E + M T
Sbjct: 82 KRPEDEVNALMKLVV---EFIKNEIDELHQNGVRVQTIGDLSRFPEEPKKAILWAMEKTK 138
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NT +V+ + L Y EIV ++ K + +D+ ED
Sbjct: 139 DNTGVVLSLALNYGGRNEIVRGIKSVIEDVKAGKISI-------DDINEDM--------- 182
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
++Y P+PD++IR SGE RLSNFLLWQ + + WP+ L
Sbjct: 183 ------FNDYLYTKGMPDPDLIIRPSGEQRLSNFLLWQCAYSEFWYSQINWPDFNGEDLR 236
Query: 273 WAILNFQ 279
AI ++Q
Sbjct: 237 KAIFDYQ 243
>sp|Q9V157|UPPS_PYRAB Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
abyssi (strain GE5 / Orsay) GN=uppS PE=3 SV=1
Length = 264
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 134/253 (52%), Gaps = 24/253 (9%)
Query: 28 LSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAF 87
+ GV+P H+A I+DGNRR+AKK GH G L +L++C EL ++ +++YAF
Sbjct: 29 VKAGVLPKHVAIIMDGNRRWAKKRE-KPPWYGHLFGSKKLEEILEWCHELGIRILTVYAF 87
Query: 88 SIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKV 147
S +NFKR++ E+ LM L +K L+ D + +YGVRV IG L+ + +R AE+
Sbjct: 88 STENFKRSKEEVERLMQLFEQKFRELV-TDKRVHEYGVRVNVIGRKELLPKSVRDAAEEA 146
Query: 148 MRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHK 207
RAT K V+ + +AY EIV V++ + + + ED DE
Sbjct: 147 ERATRKYNNYVLNVAIAYGGRSEIVDAVKD---IVRDVMDGKLR--------VEDIDEEL 195
Query: 208 NKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIG 267
L+K++Y+ P+PDI+IRT GE R+SNFLL+Q + L+ +PE
Sbjct: 196 -----------LKKYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFR 244
Query: 268 LRHLIWAILNFQR 280
+ I FQ+
Sbjct: 245 KIDFLRIIREFQK 257
>sp|Q5JGE1|UPPS_PYRKO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=uppS PE=3 SV=1
Length = 264
Score = 141 bits (355), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 137/254 (53%), Gaps = 28/254 (11%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G IP H+A I+DGNRR+A+K GH G L +L++C EL+++ +++YAFS +
Sbjct: 32 GNIPKHVAIIMDGNRRWARKLE-KPPWYGHLFGSKKLEEILEWCRELNIRTLTVYAFSTE 90
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
NFKR++ E+ LM+L EK + L+ +D + +YG+RV +G ++ E +R AE+ RA
Sbjct: 91 NFKRSKEEVEALMNLFEEKFKELV-QDERVHRYGIRVNVLGRKDMLPENVRKAAEEAERA 149
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETC--LVTKKTQPQAFKPRNPQNDVTEDADEHKN 208
T K + + I LAY EI V E ++ K +P+ D+ E+A
Sbjct: 150 TRKYSNYNLNIALAYGGRSEIADAVREIVRDVLEGKIKPE---------DIDEEA----- 195
Query: 209 KEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGL 268
+++++Y P+PDI+IRT GE R+SNFLL+Q + L+ +PE
Sbjct: 196 ----------IKRYLYYPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRK 245
Query: 269 RHLIWAILNFQRHH 282
+ I FQ+
Sbjct: 246 IDFLRIIREFQKRQ 259
>sp|O59258|UPPS_PYRHO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=uppS PE=3 SV=1
Length = 264
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 28/252 (11%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
GV+P H+A I+DGNRR+A+KH GH G L +L++C EL ++ +++YAFS +
Sbjct: 32 GVLPKHVAIIMDGNRRWARKHE-KPPWYGHLFGSKKLEEILEWCHELGIRILTVYAFSTE 90
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
NFKR++ E+ LM L EK L+ D + +YGVRV IG L+ + +R E+ RA
Sbjct: 91 NFKRSKEEVDRLMKLFEEKFRELV-TDKRVHEYGVRVNVIGRKELLPKSVRDAVEEAERA 149
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETC--LVTKKTQPQAFKPRNPQNDVTEDADEHKN 208
T K ++ + LAY EIV V++ +++ K + E+ DE
Sbjct: 150 TRKYNNYILNVALAYGGRSEIVDAVKDIARDVISGKLR-------------IEEIDEEL- 195
Query: 209 KEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGL 268
L +++Y+ P+PDI+IRT GE R+SNFLL+Q + L+ +PE
Sbjct: 196 ----------LRRYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFRK 245
Query: 269 RHLIWAILNFQR 280
+ I FQ+
Sbjct: 246 IDFLRIIREFQK 257
>sp|Q8TXA7|UPPS_METKA Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=uppS PE=3 SV=1
Length = 271
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 142/290 (48%), Gaps = 32/290 (11%)
Query: 1 MKRQVGAEESKLCRKLGVFMRKCVFGI--------LSVGVIPNHIAFILDGNRRFAKKHN 52
MKR G ++ R+ K V+ + + G +P H+ I+DGNRRFA++
Sbjct: 1 MKRVTGVNSRRVLRQAVRVSLKPVYKMYERILEEKVKEGRVPEHVGIIMDGNRRFARELG 60
Query: 53 LAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEF 112
L GHR G L +L++C +L VK V++YA S +N R + E++ L DLM E+ +
Sbjct: 61 LE-PWEGHRYGADKLEDVLEWCLDLGVKAVTVYALSTENLNRPKEELKRLFDLMEERFKA 119
Query: 113 LLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATSKNTRIVILICLAYSSTEEIV 172
L E + + V V +G L L+ +R +K RAT + + + +AY +EI+
Sbjct: 120 LA-ESERIHRRKVAVRAVGRLHLLPTRVRRAIKKAERATKEYKDRFLNVAVAYGGRQEII 178
Query: 173 HTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPD 232
V E +DV + ++ T + K++Y+G P+P+
Sbjct: 179 DAVREIA-----------------HDVKVGRLDPDEIDEGTFR-----KYVYVGDLPDPE 216
Query: 233 ILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLIWAILNFQRHH 282
++IRTSGE RLSNFLLW S+ LY WPE L+ AI FQ+
Sbjct: 217 LIIRTSGEERLSNFLLWYSAYSELYFVDVYWPEFRKIDLLRAIREFQKRE 266
>sp|Q8DI29|ISPT_THEEB Isoprenyl transferase OS=Thermosynechococcus elongatus (strain
BP-1) GN=uppS PE=3 SV=1
Length = 251
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 128/250 (51%), Gaps = 26/250 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+A I+DGN R+AK+ NL GH+ G TL LL+ C + ++ ++ YAFS +N+
Sbjct: 22 LPRHVAVIMDGNGRWAKQRNLP-RIMGHQRGVDTLKDLLRCCKDWGIEALTAYAFSTENW 80
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R E+ +LM L + L RE G + GV++ F+G+L + + ++ E+ + AT+
Sbjct: 81 GRPLPEVEFLMTLF---EQVLRRELGEMVAEGVQIHFVGDLTCLPKSLQAEIERAVAATA 137
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N +I ++ Y EI+H + + + P D DE
Sbjct: 138 NNQKIKFVVATNYGGRREIIHACRS---IAAQVKAGLLDP--------ADIDE------- 179
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
V E+H+Y G P+PD+LIRTSGE R+SNF LWQ + +Y LWP+
Sbjct: 180 ----VLFERHLYTGGLPDPDLLIRTSGELRISNFFLWQVAYAEIYVTKTLWPDFDRSAFH 235
Query: 273 WAILNFQRHH 282
A+ ++Q+
Sbjct: 236 EALRDYQQRQ 245
>sp|Q8RE08|ISPT_FUSNN Isoprenyl transferase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=uppS PE=3 SV=1
Length = 230
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 128/253 (50%), Gaps = 34/253 (13%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IP HIA I+DGN R+AKK LA GH G TL L+Y E+ VKY+++YAFS +N+
Sbjct: 5 IPKHIAIIMDGNGRWAKKRGLA-RSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFSTENW 63
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R Q+E+ LM L L+ ++ E + K +R G V E ++ EK+ T
Sbjct: 64 NRPQDEVSTLMKLFLK---YIKNERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETK 120
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N +I + I Y S EIV V N + +D E+ +E
Sbjct: 121 NNDKITLNIAFNYGSRAEIVDAV---------------------NRIIKDGKENITEE-- 157
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
D K++Y +P+PD++IRTSGE R+SNFLLWQ + LY LWP+ + +
Sbjct: 158 -----DFSKYLY-NDFPDPDLVIRTSGEMRISNFLLWQIAYSELYITDVLWPDFDEKEID 211
Query: 273 WAILNF-QRHHAY 284
AI ++ QR +
Sbjct: 212 KAIESYNQRERRF 224
>sp|O26334|UPPS_METTH Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific)
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=uppS PE=3 SV=1
Length = 255
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 128/250 (51%), Gaps = 23/250 (9%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+A I+DGNRR++K GH+ G TL +L +C +L ++ V+ YAFS +NF
Sbjct: 24 MPRHVAIIMDGNRRYSKLQGSMNPIEGHKKGIETLEKVLDWCVDLGIEIVTAYAFSTENF 83
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR + E++ LM L E E + + + K VRV +G L L+ E +R E ++T
Sbjct: 84 KRPEKEVKGLMKLFRENFEAIASNEK-IHKNRVRVRAVGKLELLPEDVRRAIEIAEKSTE 142
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
+ + ++ I + Y +EIV T + + + P D+ ED
Sbjct: 143 QYSDRLVNIAIGYDGRQEIVDA---TRKIAEDVKAGLIDP----EDIDEDM--------- 186
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+ +++Y +P ++IRTSGE RLS FLLWQSS LY +LWPE+ +
Sbjct: 187 ------INRNLYTAGLEDPHLIIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFL 240
Query: 273 WAILNFQRHH 282
AI ++Q+
Sbjct: 241 RAIRSYQQRE 250
>sp|Q9K1G6|ISPT_NEIMB Isoprenyl transferase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=uppS PE=3 SV=1
Length = 248
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 139/273 (50%), Gaps = 32/273 (11%)
Query: 20 MRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSV 79
M+ +L IP HIA I+DGN R+AKK L GH+ G L +++K+CA+L V
Sbjct: 1 MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLP-RIMGHKRGLDALENMVKHCAKLGV 59
Query: 80 KYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEP 139
+Y++++AFS +N++R ++E+ +LM L L+ ++ +R L + +R+ +G+ +
Sbjct: 60 QYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRR---LHENNMRLKILGSRERFNRQ 116
Query: 140 IRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDV 199
I E+ T+ NT + + I Y +I+ + L+ + +++
Sbjct: 117 ILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANK--LIAEGV-----------SEI 163
Query: 200 TEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSP 259
TED L KH+ +G P PD+ IRT GE R+SNFLLWQ + LY
Sbjct: 164 TEDT---------------LAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFT 208
Query: 260 AALWPEIGLRHLIWAILNFQRHHAYLEKKKKQL 292
LWP+ + L A+ +FQ+ + +QL
Sbjct: 209 DILWPDFDGKALDDAVASFQKRERRFGRTSEQL 241
>sp|Q5F5X2|ISPT_NEIG1 Isoprenyl transferase OS=Neisseria gonorrhoeae (strain ATCC 700825
/ FA 1090) GN=uppS PE=3 SV=1
Length = 248
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 32/273 (11%)
Query: 20 MRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSV 79
M+ IL IP HIA I+DGN R+AKK L GH+ G L +++K+CA+L V
Sbjct: 1 MKSSTQTILEHTAIPRHIAVIMDGNGRWAKKRFLP-RIMGHKRGLDALENMVKHCAKLGV 59
Query: 80 KYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEP 139
+Y++++AFS +N++R ++E+ +LM L L+ ++ +R L + +R+ +G+ +
Sbjct: 60 QYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRR---LHENNMRLKILGSRERFNRQ 116
Query: 140 IRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDV 199
I E+ T+ NT + + I Y +I+ + L+ + +++
Sbjct: 117 ILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANK--LIAEGV-----------SEI 163
Query: 200 TEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSP 259
TED L KH+ +G P PD+ IRT GE R+SNFLLWQ + LY
Sbjct: 164 TEDT---------------LAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFT 208
Query: 260 AALWPEIGLRHLIWAILNFQRHHAYLEKKKKQL 292
LWP+ L A+ +FQ+ + +QL
Sbjct: 209 DILWPDFDETALDAAVASFQKRERRFGRTSEQL 241
>sp|Q8U0I8|UPPS_PYRFU Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=uppS PE=3 SV=1
Length = 264
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 133/253 (52%), Gaps = 24/253 (9%)
Query: 28 LSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAF 87
+ GVIP H+A I+DGNRR+A+K GH G L ++++C EL ++ +++YAF
Sbjct: 29 VKAGVIPKHVAIIMDGNRRWARKRE-KPPWYGHFFGSKKLEEIVEWCHELGIRILTVYAF 87
Query: 88 SIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKV 147
S +NFKR++ E+ LM L EK L+ D + +YG+RV +G L+ + +R AE+
Sbjct: 88 STENFKRSKEEVDRLMKLFEEKFRELV-TDRRVHEYGIRVNVMGRKELLPKNVREAAEEA 146
Query: 148 MRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHK 207
R T K + I LAY EIV +++ NDV E + +
Sbjct: 147 ERVTRKYNNYFLNIALAYGGRSEIVDAIKDIV-----------------NDVLEGRLKLE 189
Query: 208 NKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIG 267
+ + ++ K++Y+ P+PDI+IRT GE R+SNFLL+Q + L+ +PE
Sbjct: 190 DINEEIVR-----KYLYVPNMPDPDIVIRTGGEVRISNFLLYQIAYSELFFVDVYFPEFR 244
Query: 268 LRHLIWAILNFQR 280
+ I FQ+
Sbjct: 245 KIDFLRIIREFQK 257
>sp|Q5L0J8|ISPT_GEOKA Isoprenyl transferase OS=Geobacillus kaustophilus (strain HTA426)
GN=uppS PE=3 SV=1
Length = 257
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 128/248 (51%), Gaps = 26/248 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+PNH+A I+DGN R+AKK L AGH G + + ++ EL ++ +S+YAFS +N+
Sbjct: 25 MPNHVAIIMDGNGRWAKKRALP-RAAGHYEGMQVVRKITRFANELGIQILSLYAFSTENW 83
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR ++E+ YLM L + + L E L V+V IG+ + + R EK ++ TS
Sbjct: 84 KRPKSEVDYLMKLPEQFLTTFLPE---LVAENVKVQVIGHTEALPDHTRRAVEKAVKETS 140
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NT +V+ L Y S EI V++ + K + P D+TE
Sbjct: 141 GNTGLVLNFALNYGSRAEIAAAVKQ---IAKDVERGMLAP----EDITEPL--------- 184
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+ ++ +PD+LIRTSGE RLSNF+LWQ + L+ LWP+ +H +
Sbjct: 185 ------ISSYLMTSGLADPDLLIRTSGEIRLSNFMLWQLAYTELWFTDVLWPDFTEQHFL 238
Query: 273 WAILNFQR 280
AI +QR
Sbjct: 239 EAIAAYQR 246
>sp|Q8YRL4|ISPT2_NOSS1 Isoprenyl transferase 2 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=uppS2 PE=3 SV=1
Length = 258
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 127/248 (51%), Gaps = 26/248 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IP HIA I+DGN R+A L AGHR G TL LL+ C + +K ++ YAFS +N+
Sbjct: 23 IPQHIAVIMDGNGRWATSRGLP-RIAGHRQGARTLKELLRCCKDWGIKALTAYAFSTENW 81
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
+R E+ +LM L+ E++ L RE + + GVR+ FIG+L + + ++ E+ M T
Sbjct: 82 QRPIEEVDFLM-LLFERL--LRRELSQMHREGVRISFIGDLTALPKSLQTEMERSMTETL 138
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N I + + Y S EI + + + Q ++ DA
Sbjct: 139 NNQAIHFTVAVNYGSRNEITRACRQVAELVQ------------QGKLSADA--------- 177
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+ +E+H+Y PD+LIRTSGE RLSNFLLWQ + +Y LWP+
Sbjct: 178 -VNEGIVEQHLYTTDTQPPDLLIRTSGEMRLSNFLLWQMAYTEMYFTDILWPDFDREAFH 236
Query: 273 WAILNFQR 280
A+L++Q+
Sbjct: 237 QALLSYQK 244
>sp|Q732P6|ISPT_BACC1 Isoprenyl transferase OS=Bacillus cereus (strain ATCC 10987)
GN=uppS PE=3 SV=1
Length = 258
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 36/254 (14%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G IP HIA I+DGN R+AK+ + AGH G + + K+ ++L+VK +++YAFS +
Sbjct: 27 GYIPEHIAIIMDGNGRWAKRRAMP-RIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTE 85
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
N+KR + E+ YLM L E + L E L + V+V IG + R EK M
Sbjct: 86 NWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAMEKAMEE 142
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T +NT +++ L Y S +EIV V+ K++E
Sbjct: 143 TKENTGLILNFALNYGSRDEIVSAVQHMM---------------------------KDRE 175
Query: 211 QNTIKLVD-----LEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPE 265
+ +++ D L ++ P+P++LIRTSGE R+SNF+LWQ + + WP+
Sbjct: 176 EGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPD 235
Query: 266 IGLRHLIWAILNFQ 279
HL+ AI +FQ
Sbjct: 236 FTEEHLLNAITDFQ 249
>sp|Q81WL2|ISPT_BACAN Isoprenyl transferase OS=Bacillus anthracis GN=uppS PE=3 SV=1
Length = 258
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 131/249 (52%), Gaps = 26/249 (10%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G IP HIA I+DGN R+AK+ + AGH G + + K+ ++L+VK +++YAFS +
Sbjct: 27 GYIPEHIAIIMDGNGRWAKRRAMP-RIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTE 85
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
N+KR + E+ YLM L E + L E L + V+V IG + R EK M
Sbjct: 86 NWKRPKKEVDYLMQLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAMEKAMEE 142
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T +NT +++ L Y S +EIV V+ + +D++E K +
Sbjct: 143 TKENTGLILNFALNYGSRDEIVSAVQH---------------------MMKDSEEGKVRV 181
Query: 211 QNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
++ + + L ++ P+P++LIRTSGE R+SNF+LWQ + + WP+ H
Sbjct: 182 EDVSEEM-LSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEH 240
Query: 271 LIWAILNFQ 279
L+ AI +FQ
Sbjct: 241 LLNAITDFQ 249
>sp|Q97I62|ISPT_CLOAB Isoprenyl transferase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=uppS PE=3 SV=1
Length = 257
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 27/249 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IP HIA I+DGN R+AKK NL GH+AG L +++ C+++ VKY+++Y FS +N+
Sbjct: 24 IPKHIAIIMDGNGRWAKKRNLP-RTMGHKAGGEALKRIVRECSDIGVKYLTVYGFSTENW 82
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R + E+ +M L++E FL RE L+K V + IGN+ + E T
Sbjct: 83 IRPKEEVNAIMRLIVE---FLKREFNELNKNNVIINPIGNILGLPEACITALNDAKNKTK 139
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NT +++ + L Y +EI++ V+ ++ +E+K +
Sbjct: 140 NNTGLMLNLALNYGGRDEILNAVK---------------------NIFASYEENKISKDE 178
Query: 213 TIKLVDLE--KHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
L D E ++Y G P+PDI+IR SGE RLSNFLLWQ + + WP+ +
Sbjct: 179 IFNLSDEEFSSYLYTGCIPDPDIIIRPSGEKRLSNFLLWQCAYSEFWYSNINWPDFSIED 238
Query: 271 LIWAILNFQ 279
L AI ++Q
Sbjct: 239 LHTAIKDYQ 247
>sp|Q9JX35|ISPT_NEIMA Isoprenyl transferase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=uppS PE=3 SV=1
Length = 248
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 32/273 (11%)
Query: 20 MRKCVFGILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSV 79
M+ +L IP HIA I+DGN R+AKK L GH+ G L +++K+CA+L V
Sbjct: 1 MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLP-RIMGHKRGLDALENMVKHCAKLGV 59
Query: 80 KYVSIYAFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEP 139
+Y++++AFS +N++R ++E+ +LM L L+ ++ +R L + +R+ +G+ +
Sbjct: 60 QYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRR---LHENNMRLKILGSRERFNRQ 116
Query: 140 IRVTAEKVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDV 199
I E+ T+ NT + + I Y +I+ + L+ + +++
Sbjct: 117 ILKGIEEAEALTANNTGLTLSIAADYGGRWDILQAANK--LIAEGV-----------SEI 163
Query: 200 TEDADEHKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSP 259
TED L K++ +G P PD+ IRT GE R+SNFLLWQ + LY
Sbjct: 164 TEDT---------------LAKYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFT 208
Query: 260 AALWPEIGLRHLIWAILNFQRHHAYLEKKKKQL 292
LWP+ + L A+ +FQ+ + +QL
Sbjct: 209 DILWPDFDGKALDDAVASFQKRERRFGRTSEQL 241
>sp|Q6HEZ2|ISPT_BACHK Isoprenyl transferase OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=uppS PE=3 SV=1
Length = 258
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 131/249 (52%), Gaps = 26/249 (10%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G IP HIA I+DGN R+AK+ + AGH G + + K+ ++L+VK +++YAFS +
Sbjct: 27 GYIPEHIAIIMDGNGRWAKRRAMP-RIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTE 85
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
N+KR + E+ YLM L E + L E L + V+V IG + R EK M
Sbjct: 86 NWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQQDRLPTHTRRAMEKAMEE 142
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T +NT +++ L Y S +EIV V+ + +D++E K +
Sbjct: 143 TKENTGLILNFALNYGSRDEIVSAVQH---------------------MMKDSEEGKVRV 181
Query: 211 QNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
++ + + L ++ P+P++LIRTSGE R+SNF+LWQ + + WP+ H
Sbjct: 182 EDVSEEM-LSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFTEEH 240
Query: 271 LIWAILNFQ 279
L+ AI +FQ
Sbjct: 241 LLNAITDFQ 249
>sp|Q895K8|ISPT_CLOTE Isoprenyl transferase OS=Clostridium tetani (strain Massachusetts /
E88) GN=uppS PE=3 SV=1
Length = 255
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 26/252 (10%)
Query: 28 LSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAF 87
L + IP HIA I+DGN R+AK+ L GH+AG T+ ++K C + V+Y+++YAF
Sbjct: 21 LDLDNIPKHIAIIMDGNGRWAKERKLP-RSLGHKAGVETIRDIVKECNNIGVRYLTLYAF 79
Query: 88 SIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKV 147
S +N+KR + EI LM+L++ +L +E L + V V IG++ + + K
Sbjct: 80 STENWKRPKEEINALMELLVN---YLRKEVAELHQNNVVVNTIGDVSKLPKACEDELMKA 136
Query: 148 MRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHK 207
T NT +V+ + L Y +EI+ ++ L+ K + + N D+
Sbjct: 137 YNKTKNNTGLVLNLALNYGGRDEIIRAIK---LMYKDIEKKGLDIENVNEDL-------- 185
Query: 208 NKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIG 267
L+ ++Y P+PD++IR SGE R+SNFLLWQ + + WP+
Sbjct: 186 -----------LKNYLYTKGMPDPDLIIRPSGEQRISNFLLWQCAYSEFWYSNIKWPDFK 234
Query: 268 LRHLIWAILNFQ 279
HL AI ++Q
Sbjct: 235 KHHLHKAIKDYQ 246
>sp|O14171|YE54_SCHPO Uncharacterized protein C4D7.04c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4D7.04c PE=3 SV=2
Length = 264
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 126/250 (50%), Gaps = 24/250 (9%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G +P HIAF++DGNRR+A++ + GH +GF L SLLK C +L VK VS + FSI+
Sbjct: 32 GKVPQHIAFVMDGNRRWARQRRMET-IEGHSSGFEALKSLLKVCLKLGVKEVSAFTFSIE 90
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
NFKR++ E+ LM++ + + + +YG+R+ +G+L + + TA K +
Sbjct: 91 NFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRLQPDVLETALKAVEI 150
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T NT+ + +C Y+S EI +V+ + K + P + D+
Sbjct: 151 TKHNTKATLNVCFPYTSRHEIATSVQS---IVKMAEDGTITPEDIDEDI----------- 196
Query: 211 QNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQS-SNCMLYSPAALWPEIGLR 269
EK++ + D+LIRTSG RLS+F+LWQ N + WP+ +
Sbjct: 197 --------FEKNLLIKDSLPLDLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFSIW 248
Query: 270 HLIWAILNFQ 279
++ +Q
Sbjct: 249 KFFPMLIQYQ 258
>sp|Q819Y1|ISPT_BACCR Isoprenyl transferase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=uppS PE=3 SV=1
Length = 258
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 26/249 (10%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G IP HIA I+DGN R+AK+ + AGH G + + K+ ++L+VK +++YAFS +
Sbjct: 27 GYIPEHIAIIMDGNGRWAKRRAMP-RIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTE 85
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
N+KR + E+ YLM L E + L E L + V+V IG + R EK M
Sbjct: 86 NWKRPKKEVDYLMKLPEEFLGTFLPE---LIEENVQVRVIGQKDRLPTHTRRAMEKAMED 142
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T +NT +++ L Y S +EIV V+ + +D +E K +
Sbjct: 143 TKENTGLILNFALNYGSRDEIVSAVQH---------------------MMKDNEEGKIRS 181
Query: 211 QNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
+ + + L ++ P+P++LIRTSGE R+SNF+LWQ + + WP+ H
Sbjct: 182 EEVSEEM-LSSYLMTSSLPDPELLIRTSGELRISNFMLWQIAYSEFWFTDVYWPDFKEEH 240
Query: 271 LIWAILNFQ 279
L+ AI +FQ
Sbjct: 241 LLNAITDFQ 249
>sp|Q9ZEJ7|ISPT_ANAVT Isoprenyl transferase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=uppS PE=3 SV=2
Length = 249
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 26/251 (10%)
Query: 32 VIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDN 91
++P H+A I+DGN R+AK+ L GH+ G L LL+ C + ++ ++ YAFS +N
Sbjct: 19 LLPKHVAVIMDGNGRWAKRQGLP-RIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTEN 77
Query: 92 FKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRAT 151
+KR Q E+ +LM L + LRE + + V++ F+GNL + ++ + M AT
Sbjct: 78 WKRPQEEVEFLMTLFQRVLRQELRE---MVEENVQIQFVGNLAALPRSLQAEISRSMEAT 134
Query: 152 SKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQ 211
N I + Y +EI+ + +K Q +P +++ E+
Sbjct: 135 KNNRGIRFSVATNYGGRQEILQACRA---IAQKVQQGLLQP----DEIDEEV-------- 179
Query: 212 NTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHL 271
E+H+Y +PD+LIRTSGE RLSNFLLWQ + +Y LWP+
Sbjct: 180 -------FERHLYTAGIADPDLLIRTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEF 232
Query: 272 IWAILNFQRHH 282
A+ +Q+
Sbjct: 233 HRALCAYQQRE 243
>sp|Q82TZ9|ISPT_NITEU Isoprenyl transferase OS=Nitrosomonas europaea (strain ATCC 19718 /
NBRC 14298) GN=uppS PE=3 SV=1
Length = 263
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 29/267 (10%)
Query: 26 GILSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIY 85
GI G IP HIA I+DGN R+A+K L AGH G + +K C E V +++I+
Sbjct: 10 GIPETGAIPKHIAIIMDGNGRWARKRFLP-RIAGHTQGVEAVRGTIKACIERGVSHLTIF 68
Query: 86 AFSIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAE 145
AFS +N++R E++ LM L L +E RE L + GVR IG++ I +
Sbjct: 69 AFSSENWRRPAEEVKLLMQLFLAALE---REVTGLHENGVRFRVIGDISKFDPKIVDFVQ 125
Query: 146 KVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADE 205
+ T+ N+R+ + Y +I+ V + ++T+ NP + VT D
Sbjct: 126 QGEALTAGNSRLNFTVAANYGGRWDIMQAVRK--MITE----------NPDSAVTFDEP- 172
Query: 206 HKNKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPE 265
D+ +H+ + P PD+ IRT GE R+SNFLLWQ + LY LWP+
Sbjct: 173 ------------DIARHLALADAPEPDLFIRTGGECRISNFLLWQLAYTELYFTDTLWPD 220
Query: 266 IGLRHLIWAILNFQRHHAYLEKKKKQL 292
L AI ++++ + +Q+
Sbjct: 221 FDASALDEAIASYRKRERRFGRTSEQI 247
>sp|Q8F144|ISPT_LEPIN Isoprenyl transferase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=uppS
PE=3 SV=1
Length = 241
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 25/240 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P HIA I+DGN R+A GHR G + L+ EL +K +S+YAFS +N+
Sbjct: 8 LPKHIAVIMDGNGRWATSRG-KSRSEGHREGAQAIDRLMDASLELGLKNISLYAFSTENW 66
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR EIR + L++E +E L + K G+R+ G+ ++ + + + T
Sbjct: 67 KRPVTEIRSIFSLLIEFIETRLDT---IHKRGIRILHSGSRKKLTRGVLDKIDFAVDKTQ 123
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
KN + + CL Y S +E++ +E L K+++ KP
Sbjct: 124 KNKNLTVNFCLNYGSRDELLRAAQELFLERKRSKVALEKP-------------------- 163
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+K + EK +Y + P D+LIRT+GE RLSNFLLWQS+ LY LWPE L+
Sbjct: 164 -LKEKEFEKFLYTSILPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPEFDKNSLV 222
>sp|Q72U10|ISPT_LEPIC Isoprenyl transferase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=uppS PE=3 SV=1
Length = 241
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 25/240 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P HIA I+DGN R+A GHR G + L+ EL +K +S+YAFS +N+
Sbjct: 8 LPKHIAVIMDGNGRWATSRG-KSRSEGHREGAQAIDRLMDASLELGLKNISLYAFSTENW 66
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR EIR + L++E +E L + K G+R+ G+ ++ + + + T
Sbjct: 67 KRPVTEIRSIFSLLIEFIETRLDT---IHKRGIRILHSGSRKKLTRGVLDKIDFAVDKTQ 123
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
KN + + CL Y S +E++ +E L K+++ KP
Sbjct: 124 KNKNLTVNFCLNYGSRDELLRAAQELFLERKRSKVALEKP-------------------- 163
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+K + EK +Y + P D+LIRT+GE RLSNFLLWQS+ LY LWPE L+
Sbjct: 164 -LKEKEFEKFLYTSILPPVDLLIRTAGEQRLSNFLLWQSAYAELYFTDTLWPEFDKNSLV 222
>sp|Q58767|UPPS_METJA Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific)
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=uppS PE=3
SV=1
Length = 280
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 133/252 (52%), Gaps = 26/252 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+A I+DGNRR A+ + GH G + +L++ +L + V++YAFS +NF
Sbjct: 48 LPKHVAIIMDGNRRAAEIYG-KDRYYGHYLGAEKVREVLRWARDLGINVVTLYAFSTENF 106
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
+R + E+ LM+L EK + + +D + +Y VRV IG + L+ + ++ + T
Sbjct: 107 RRPKEEVDKLMEL-FEKKFYEIADDEEIHRYEVRVRAIGRINLLPKNVQKAIKYAEERTK 165
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
+ + I +AY +EI+ V++ + +K + +P ED D+
Sbjct: 166 NYNKFFVNIAIAYGGQQEIIDAVKK---IAEKVKRGEIEP--------EDIDK------- 207
Query: 213 TIKLVDLEKHMYMG--VYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
+L+D KH+Y +PNPD++IRTSGE R+SNFL+WQSS LY WP
Sbjct: 208 --ELID--KHLYTANLPFPNPDLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVD 263
Query: 271 LIWAILNFQRHH 282
+ A+ ++QR
Sbjct: 264 FLRAVRDYQRRQ 275
>sp|Q03175|SRT1_YEAST Dehydrodolichyl diphosphate synthase SRT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SRT1 PE=1
SV=1
Length = 343
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 137/274 (50%), Gaps = 39/274 (14%)
Query: 28 LSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAF 87
L VG +P H++FI+DGNRR+AK L + GH AG LTL++LL C L VK VS YAF
Sbjct: 61 LRVGPVPEHVSFIMDGNRRYAKSRRLPVK-KGHEAGGLTLLTLLYICKRLGVKCVSAYAF 119
Query: 88 SIDNFKRTQNEIRYLMDLMLEKM-EFLLREDGFLSK-YGVRVCFIGNLGLVSEPIRVTAE 145
SI+NF R + E+ LM+L K+ EF R + YG ++ +G+ L+S +R +
Sbjct: 120 SIENFNRPKEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRIVGDQSLLSPEMRKKIK 179
Query: 146 KVMRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADE 205
KV T + IC Y+S +++HT+ D ED E
Sbjct: 180 KVEEITQDGDDFTLFICFPYTSRNDMLHTIR---------------------DSVEDHLE 218
Query: 206 HKNKEQNTIKLVDLEKHMYMGVYPNP-DILIRTSGENRLSNFLLWQ-SSNCMLYSPAALW 263
+K+ N K + MYMG + N ++LIRTSG RLS+++LWQ N + LW
Sbjct: 219 NKSPRINIRKFTN---KMYMGFHSNKCELLIRTSGHRRLSDYMLWQVHENATIEFSDTLW 275
Query: 264 PEIGLRHLIWAILNF----------QRHHAYLEK 287
P + IL + +++H+ EK
Sbjct: 276 PNFSFFAMYLMILKWSFFSTIQKYNEKNHSLFEK 309
>sp|Q7NPE7|ISPT_GLOVI Isoprenyl transferase OS=Gloeobacter violaceus (strain PCC 7421)
GN=uppS PE=3 SV=1
Length = 249
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 124/247 (50%), Gaps = 26/247 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+A I+DGN R+A K NL GH+AG L LL+ C + + +++YAFS +N+
Sbjct: 20 LPRHVAAIMDGNGRWASKRNLP-RVMGHQAGVSALKELLRCCKDWGIGALTVYAFSTENW 78
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR Q E+ +LM L + + L E + GVR+ F+G L + ++ E M AT
Sbjct: 79 KRPQYEVEFLMALFEKVLNHELSE---MVDEGVRIRFVGALAHLPGALQSAIEGAMAATE 135
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NT + + Y +EIV+ E + ++ + P E DE
Sbjct: 136 ANTAVEFTVATNYGGRQEIVNACRE---LAEQVRSGRLLP--------EQIDE------- 177
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
KL +H+Y +PD+LIRTSGE RLSN+LLWQ + +Y LWP+
Sbjct: 178 --KL--FAQHLYTRELSDPDLLIRTSGEQRLSNYLLWQMAYTEIYVADVLWPDFDRAAFH 233
Query: 273 WAILNFQ 279
A+ ++Q
Sbjct: 234 AALQSYQ 240
>sp|P58563|ISPT1_NOSS1 Isoprenyl transferase 1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=uppS1 PE=3 SV=1
Length = 249
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 26/251 (10%)
Query: 32 VIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDN 91
++P H+A I+DGN R+AK+ L GH+ G L LL+ C + ++ ++ YAFS +N
Sbjct: 19 LLPKHVAVIMDGNGRWAKRQGLP-RIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTEN 77
Query: 92 FKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRAT 151
+KR Q E+ +LM L + LRE + + V++ F+GNL + ++ + M T
Sbjct: 78 WKRPQEEVEFLMTLFQRVLRQELRE---MVEENVQIQFVGNLTALPRSLQAEISRSMEET 134
Query: 152 SKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQ 211
N I + Y +EI+ + +K Q +P +++ E+
Sbjct: 135 KNNRGIRFSVATNYGGRQEILQACR---AIAQKVQQGLLQP----DEINEEV-------- 179
Query: 212 NTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHL 271
E+H+Y +PD+LIRTSGE RLSNFLLWQ + +Y LWP+
Sbjct: 180 -------FERHLYTAGISDPDLLIRTSGEMRLSNFLLWQMAYGEIYITDTLWPDFDRTEF 232
Query: 272 IWAILNFQRHH 282
A+ +Q+
Sbjct: 233 HRALCAYQQRE 243
>sp|Q570Q8|DDPS5_ARATH Dehydrodolichyl diphosphate synthase 5 OS=Arabidopsis thaliana
GN=At5g58784 PE=2 SV=2
Length = 302
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 28/246 (11%)
Query: 32 VIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDN 91
++P H+A ILDGNRR+A+K L G GH AG LM K C + +S++AFS +N
Sbjct: 69 IMPKHVAVILDGNRRWAEKRGL-GTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTEN 127
Query: 92 FKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRAT 151
++R ++E++ LM L EK +L + +L +++ IGN + E + E+V AT
Sbjct: 128 WERPEDEVKCLMAL-FEK--YLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEAT 184
Query: 152 SKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQ 211
++I + YS +I+ + K Q ED +E +++
Sbjct: 185 KSYEGKNLIIAIDYSGRYDILQACKSLANKVKDGLIQ-----------VEDINEKAMEKE 233
Query: 212 NTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIG---- 267
K + +PNPD+LIRTSGE R+SNF LWQS+ LY P LWP+ G
Sbjct: 234 LLTKCSE---------FPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFGEAEY 284
Query: 268 LRHLIW 273
L L W
Sbjct: 285 LEALTW 290
>sp|Q9HKQ0|UPPS_THEAC Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=uppS PE=3 SV=1
Length = 258
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 125/252 (49%), Gaps = 30/252 (11%)
Query: 34 PNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNFK 93
P HI I DGNRR+A+ ++ E GH G + ++ +C EL ++ V+ YAFS +NF+
Sbjct: 29 PRHIGIITDGNRRYARNVGIS-ENEGHVKGKEKVEEVVDWCMELDIRIVTFYAFSTENFR 87
Query: 94 RTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATSK 153
R+ E+ +L L+ + LL+ D + K + V IGNL ++ +R T V T
Sbjct: 88 RSPEEVDFLFHLIDNAFKSLLK-DERVYKNRINVKVIGNLSILPAYLRQTIHIVEETTKN 146
Query: 154 NTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQNT 213
+ + + Y EEI+ ++ +T DA + K
Sbjct: 147 FNNYQLNLAIGYGGREEILDAIKR---------------------ITRDAMDGKL----N 181
Query: 214 IKLVDLEK---HMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRH 270
I +D EK ++Y G P+PD+++RTSGE R+SNFLLWQS+ LY WPE
Sbjct: 182 IDELDEEKFRMYLYDGRIPDPDLILRTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLD 241
Query: 271 LIWAILNFQRHH 282
+ AI ++QR
Sbjct: 242 FLRAIYSYQRRQ 253
>sp|Q97B58|UPPS_THEVO Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=uppS PE=3 SV=1
Length = 258
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 26/250 (10%)
Query: 34 PNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNFK 93
P H+ I DGNRR+A+ + E GH G + +L +C EL +K V+ YAFS +NFK
Sbjct: 29 PRHVGIITDGNRRYARIVGIP-ENEGHVKGKNKVEEVLDWCMELDIKIVTFYAFSTENFK 87
Query: 94 RTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATSK 153
R+ E+ +L L+ + LL+ D + K + V IGN+ ++ E +R T K+ T+K
Sbjct: 88 RSPEEVDFLFHLINDAFISLLK-DERVYKNKINVKVIGNVSMLPEYLRETI-KITEETTK 145
Query: 154 N-TRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N + + + + Y EEI+ + K+ A + +++ DE K
Sbjct: 146 NFSNYHMNLAIGYGGREEILDAI-------KRIARDAIAGKINVDEI----DESK----- 189
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
++Y G P+PD+++RTSGE R+SNFLLWQS+ LY WPE +
Sbjct: 190 ------FRNYLYDGNLPDPDLILRTSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFL 243
Query: 273 WAILNFQRHH 282
AI ++QR
Sbjct: 244 RAIYSYQRRQ 253
>sp|O29049|UPPS_ARCFU Tritrans,polycis-undecaprenyl-diphosphate synthase
(geranylgeranyl-diphosphate specific) OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=uppS PE=3 SV=1
Length = 251
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 133/250 (53%), Gaps = 25/250 (10%)
Query: 31 GVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSID 90
G IP+HIA I+DGNRRFA+K L GH G +L++C +L VK +++YAFS +
Sbjct: 18 GAIPHHIAIIMDGNRRFARKKGLEPH-EGHFFGSKKAEEVLEWCWDLGVKMLTLYAFSTE 76
Query: 91 NFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRA 150
NF+R++ E + + L+ ++ LL+ D + +RV +G L+ E +R T ++V
Sbjct: 77 NFRRSEKEKKNIFQLLESELRRLLK-DRRTYERELRVKVVGKRELLPENLRETIKEVEER 135
Query: 151 TSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKE 210
T K+ R + + +AY +EI+ V + +K + +P E+ DE
Sbjct: 136 TKKHRRHYLNVAVAYGGRQEIIDAVR---AILRKVRKGEVRP--------EEIDEKM--- 181
Query: 211 QNTIKLVDLEKHMY-MGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLR 269
LE+H+Y G Y D++IRT GE RLSNFL WQ++N + Y WPE
Sbjct: 182 --------LEEHLYGEGRYSKVDLIIRTGGEQRLSNFLPWQAANSVAYFCDVYWPEFRKI 233
Query: 270 HLIWAILNFQ 279
L+ AI +Q
Sbjct: 234 DLLRAIRAWQ 243
>sp|Q5M677|ISPT_STRT2 Isoprenyl transferase OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=uppS PE=3 SV=1
Length = 249
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 22/250 (8%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IPNHI I+DGN R+AKK L GH+AG L + ++L VK +++YAFS +N+
Sbjct: 16 IPNHIGIIMDGNGRWAKKR-LQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R Q+E++++M+L +E + E L K VR+ IG+ + + EK + T
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPE---LDKNNVRILTIGDNSRLPKETLDALEKAVEQTK 131
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N+ +++ L Y EIV V+ + K+ + +P D+ K
Sbjct: 132 HNSGLILNFALNYGGRAEIVSAVQA---IAKEVEIGRLRPEAIDEDLIA-------KHLM 181
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
T KL L Y +PD++IRTSGE RLSNFL WQS+ Y WP+ + L
Sbjct: 182 TDKLPYL--------YRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQQGLH 233
Query: 273 WAILNFQRHH 282
AI ++ + H
Sbjct: 234 QAISDYNKRH 243
>sp|Q5M1N6|ISPT_STRT1 Isoprenyl transferase OS=Streptococcus thermophilus (strain CNRZ
1066) GN=uppS PE=3 SV=1
Length = 249
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 22/250 (8%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IPNHI I+DGN R+AKK L GH+AG L + ++L VK +++YAFS +N+
Sbjct: 16 IPNHIGIIMDGNGRWAKKR-LQPRVMGHKAGMDALQKVTIEASQLGVKVLTVYAFSTENW 74
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R Q+E++++M+L +E + E L K VR+ IG+ + + EK + T
Sbjct: 75 SRPQDEVKFIMNLPVEFFNKYVPE---LDKNNVRILTIGDNSRLPKETLDALEKAVEQTK 131
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N+ +++ L Y EIV V+ + K+ + +P D+ K
Sbjct: 132 HNSGLILNFALNYGGRAEIVSAVQA---IAKEVEIGRLRPEAIDEDLIA-------KHLM 181
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
T KL L Y +PD++IRTSGE RLSNFL WQS+ Y WP+ + L
Sbjct: 182 TDKLPYL--------YRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTDVFWPDFDQQGLH 233
Query: 273 WAILNFQRHH 282
AI ++ + H
Sbjct: 234 QAISDYNKRH 243
>sp|Q8EQU9|ISPT_OCEIH Isoprenyl transferase OS=Oceanobacillus iheyensis (strain DSM 14371
/ JCM 11309 / KCTC 3954 / HTE831) GN=uppS PE=3 SV=1
Length = 252
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 123/248 (49%), Gaps = 26/248 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IP+HIA I+DGN R+A+K L AGHR G T+ ++K +VK +++Y FS +N+
Sbjct: 23 IPSHIAIIMDGNGRWAQKRGLP-RIAGHREGVSTVNRIVKTAVNANVKVLTLYTFSTENW 81
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
KR ++E+ +++ L E + L G + VRV IG+ V + + E M T
Sbjct: 82 KRPKSEVDFILKLPKEFLHVYL--PGLIEN-NVRVQTIGDFNAVPKHTQDAIEYAMEKTK 138
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
N +V+ L Y S EI+H V++ TK ++ E DE
Sbjct: 139 DNDGLVLNFALNYGSRYEIIHAVKQIVQKTKASELDV-----------EQLDESY----- 182
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
EKH++ +PD+LIRT GE RLSNF+LWQ + + LWPE
Sbjct: 183 ------FEKHLFTNGLSDPDLLIRTGGEYRLSNFMLWQLAYTEFWFTEKLWPEFDEDTFH 236
Query: 273 WAILNFQR 280
A++ +Q+
Sbjct: 237 QALMEYQQ 244
>sp|Q8A1E0|ISPT_BACTN Isoprenyl transferase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=uppS
PE=3 SV=1
Length = 244
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 28/260 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
IP HIA I+DGN R+AK+ GH+AG T+ +++ A L VKY+++Y FS +N+
Sbjct: 12 IPQHIAIIMDGNGRWAKQRG-KERTYGHQAGAETVHKIIEDAARLGVKYLTLYTFSTENW 70
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R Q E+ LM+L+++ +E + L K +R IG++ + ++ + + T+
Sbjct: 71 NRPQEEVAALMNLLVDSIE-----EETLMKNNIRFRIIGDIKKLPAEVQEGLSRCIEHTA 125
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NT +++ L+YSS E+ V + + K + P + DE+
Sbjct: 126 NNTGTCLVLALSYSSRWEMTEAVRQIATLAKTGE---ISPE-------QITDEY------ 169
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
+ H+ P+PD+LIRT GE RLSN+LLWQ + LY WP+
Sbjct: 170 ------ITAHLTTNFMPDPDLLIRTGGEIRLSNYLLWQCAYSELYFCDTFWPDFDKEEFC 223
Query: 273 WAILNFQRHHAYLEKKKKQL 292
AI +Q+ K +Q+
Sbjct: 224 KAIYEYQQRERRFGKTSEQI 243
>sp|Q9KA67|ISPT_BACHD Isoprenyl transferase OS=Bacillus halodurans (strain ATCC BAA-125 /
DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=uppS PE=3
SV=1
Length = 256
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 26/253 (10%)
Query: 28 LSVGVIPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAF 87
L IP H+A I+DGN R+AKK L AGHR G + +++ +L ++ +S+YAF
Sbjct: 22 LDESAIPKHVAIIMDGNGRWAKKKGLP-RIAGHREGMKVINKIVRKAIDLKIEVLSLYAF 80
Query: 88 SIDNFKRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKV 147
S +N+KR + E+ YL+ L FL E L + V+V +G L + E K
Sbjct: 81 STENWKRPRTEVDYLLKL---PERFLKLELPNLMEENVQVRIMGGLDTLPEHTAKAVTKA 137
Query: 148 MRATSKNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHK 207
M T NT +++ L Y S E+V +++ V K+ + + +TED
Sbjct: 138 MEETKDNTGLILNFALNYGSRYEMVEAMKQ---VAKEVETGTLS----SDAITEDV---- 186
Query: 208 NKEQNTIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIG 267
+ +H+ +PD+LIRTSGE RLSNF+LWQ + + LWP+
Sbjct: 187 -----------ISRHLMTADLRDPDLLIRTSGEIRLSNFMLWQLAYSEFWFTDVLWPDFT 235
Query: 268 LRHLIWAILNFQR 280
HL AI +Q+
Sbjct: 236 EHHLTEAIAVYQK 248
>sp|Q55482|ISPT_SYNY3 Isoprenyl transferase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=uppS PE=3 SV=1
Length = 249
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 26/250 (10%)
Query: 33 IPNHIAFILDGNRRFAKKHNLAGEGAGHRAGFLTLMSLLKYCAELSVKYVSIYAFSIDNF 92
+P H+A I+DGN R+AK+ + GH+ G +L +LL+ C + + ++ YAFS +N+
Sbjct: 20 LPQHVAVIMDGNGRWAKQRGMP-RIMGHQRGVDSLKNLLRCCDDWGIAALTAYAFSTENW 78
Query: 93 KRTQNEIRYLMDLMLEKMEFLLREDGFLSKYGVRVCFIGNLGLVSEPIRVTAEKVMRATS 152
R E+ +LM L + L+E + VR+ F+GNL + ++ + M T
Sbjct: 79 GRPLEEVEFLMTLFERVLRRELKE---MMAENVRIRFVGNLTSLPRSLQDEIARSMEDTK 135
Query: 153 KNTRIVILICLAYSSTEEIVHTVEETCLVTKKTQPQAFKPRNPQNDVTEDADEHKNKEQN 212
NT I + Y +EIVH + + ++ Q P
Sbjct: 136 NNTGIRFTVATNYGGRQEIVHVCQA---IAREVQSGKLDP-------------------E 173
Query: 213 TIKLVDLEKHMYMGVYPNPDILIRTSGENRLSNFLLWQSSNCMLYSPAALWPEIGLRHLI 272
TI +EK++Y +PD+LIRTSGE R+SNFLLWQ + +Y + LWP+ +
Sbjct: 174 TIDEGVVEKYLYTEGLSHPDLLIRTSGELRISNFLLWQMAYAEIYVTSTLWPDFDRQAFH 233
Query: 273 WAILNFQRHH 282
A+ ++Q+ H
Sbjct: 234 LALRDYQQRH 243
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,033,788
Number of Sequences: 539616
Number of extensions: 4294591
Number of successful extensions: 9623
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 8868
Number of HSP's gapped (non-prelim): 258
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)