BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038171
(509 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 229/482 (47%), Gaps = 30/482 (6%)
Query: 26 TSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAK 85
TSS PPGP G P IG++ PH++ +S++YG ++ +RIG P +++S
Sbjct: 5 TSSKGLKNPPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLD 63
Query: 86 MAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSP-YGEYWREIRKICVVHL----FNS 140
++ L F GRP + T L NG + FSP G W R++ L S
Sbjct: 64 TIRQALVRQGDDFKGRP-DLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIAS 122
Query: 141 IRAQNFRPIREDEVSR----MIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDG 196
A + E+ VS+ +I ++ N + N IC + FG+R D
Sbjct: 123 DPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDH 182
Query: 197 NEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQE 256
N + + + E+ D+ P + ++ + + ++ ++ F Q+
Sbjct: 183 NHQELLSLVNLNNNFGEVVGSGNP---ADFIPILRYLPNPS--LNAFKDLNEKFYSFMQK 237
Query: 257 LIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGF----KVDLTLDHIKAVLMNIFVAGTDT 312
++ EH +T D+ D L++ + + V L+ + I +++++F AG DT
Sbjct: 238 MVKEHY---KTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDT 294
Query: 313 SAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQP 372
+ W++ YL+ +PRV +K+QEE+ +++G ++ D L Y++A + ET R
Sbjct: 295 VTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRR-PRLSDRSHLPYMEAFILETFRHSS 353
Query: 373 PAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI--DRSVD 430
P +P TT + + G+ IP V+VN W I D + W NP EF PERF+ D ++D
Sbjct: 354 FVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID 413
Query: 431 FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGI 490
K + + I FG G+R C G + V L LA LL + ++ +P G+K +D + G+
Sbjct: 414 -KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK---VDMTPIYGL 469
Query: 491 TV 492
T+
Sbjct: 470 TM 471
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 224/454 (49%), Gaps = 25/454 (5%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP IGN+ Q D SF SK YGP+ ++ G P ++ +
Sbjct: 5 TSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
KE L + +FSGR S +QR+T GL +I S G+ W+EIR+ + L N + ++
Sbjct: 65 VKEALIDNGEEFSGRGNSPISQRIT-KGLGII-SSNGKRWKEIRRFSLTTLRNFGMGKRS 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSD-GNEEAI 201
++E ++E + + + + T L CN IC + F KR D ++ +
Sbjct: 123 IEDRVQEEAHCLVEEL-----RKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFL 177
Query: 202 SGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH 261
+ RF+ + + I V + P + ID G ++ NV + + +E + EH
Sbjct: 178 TLMKRFNENFRILNSPWIQ--VCNNFPLL--IDCFPGTHNKVLKNVALTRSYIREKVKEH 233
Query: 262 LDPKRTKADMQQ-EDLVDV-LLQIRKHR-GFKVDLTLDHIKAVLMNIFVAGTDTSAATLV 318
+ D+ D +D L+++ + + K + ++++ + ++FVAGT+T++ TL
Sbjct: 234 ----QASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLR 289
Query: 319 WTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLV 378
+ + L+KHP V KVQEEI ++G ++S +D + Y AVV E R P V
Sbjct: 290 YGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR-SHMPYTDAVVHEIQRYSDLVPTGV 348
Query: 379 PRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEF 438
P T + Y IP T + ++ D + + NP F+P F+D++ +FK ++ F
Sbjct: 349 PHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-F 407
Query: 439 IPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
+PF AG+RIC G L + L L +L F+ +
Sbjct: 408 MPFSAGKRICAGEGLARMELFLFLTTILQNFNLK 441
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 227/471 (48%), Gaps = 32/471 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP IGNL Q + SF L++++GP+ +L +G +++ K
Sbjct: 5 TSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNF 146
KE L + +FSGR A G +IF+ G W++IR+ + L N +
Sbjct: 65 VKEALLDYKDEFSGRGDLPAFHAHRDRG--IIFN-NGPTWKDIRRFSLTTLRNYGMGKQG 121
Query: 147 RPIR-EDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
R + E ++E++ Q + T + CN I + F K D N+E
Sbjct: 122 NESRIQREAHFLLEAL-----RKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKF- 175
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH- 261
R L +E L ++ Y+ F ++ L G R++ NV E + E + EH
Sbjct: 176 --LRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHH 233
Query: 262 --LDPKRTKADMQQEDLVDVLL---QIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
LDP + DL D LL + KH ++ T+D I + ++F AGT+T++ T
Sbjct: 234 QSLDPNCPR------DLTDCLLVEMEKEKHSAERL-YTMDGITVTVADLFFAGTETTSTT 286
Query: 317 LVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
L + + LMK+P + +K+ EEI ++G ++ +D QE+ Y+ AVV E R P
Sbjct: 287 LRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR-QEMPYMDAVVHEIQRFITLVPS 345
Query: 377 LVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNF 436
+P E T +I GY IP T+V ++ D + + +PE+F PE F++ + FK ++
Sbjct: 346 NLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY 405
Query: 437 EFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSL 487
F PF G+R+C G L + L L +L F+ + P + +D+D +
Sbjct: 406 -FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK--PLVDPKDIDLSPI 453
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 174 bits (442), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 216/457 (47%), Gaps = 29/457 (6%)
Query: 26 TSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAK 85
TSS LPPGP LP IGN+ Q S LSK YGP+ +L G P +++ +
Sbjct: 5 TSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYE 64
Query: 86 MAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQ 144
KE L +FSGR +R G ++FS G+ W+EIR+ ++ L N + +
Sbjct: 65 AVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVFS-NGKKWKEIRRFSLMTLRNFGMGKR 122
Query: 145 NFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAI 201
+ ++E ++E + + + + T L CN IC + F KR D ++
Sbjct: 123 SIEDRVQEEARCLVEEL-----RKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQF 177
Query: 202 SGRSRFHTLLSEIQALSIAF--FVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
+ L I+ LS + ++SP ID G +L NV + E +
Sbjct: 178 --LNLMEKLNENIKILSSPWIQICNNFSPI---IDYFPGTHNKLLKNVAFMKSYILEKVK 232
Query: 260 EHLDPKRTKADMQQ-EDLVDVLL---QIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAA 315
EH + DM +D +D L + KH + T++ ++ +++F AGT+T++
Sbjct: 233 EH----QESMDMNNPQDFIDCFLMKMEKEKHNQ-PSEFTIESLENTAVDLFGAGTETTST 287
Query: 316 TLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
TL + + L+KHP V KVQEEI ++G N+S +D + Y AVV E R P
Sbjct: 288 TLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR-SHMPYTDAVVHEVQRYIDLLP 346
Query: 376 LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKN 435
+P T Y IP T + ++ ++ D + + NPE F+P F+D +FK
Sbjct: 347 TSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSK 406
Query: 436 FEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
+ F+PF AG+RIC G L + L L ++L F+ +
Sbjct: 407 Y-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 442
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 213/447 (47%), Gaps = 25/447 (5%)
Query: 34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKA 93
PPGP LP IGN+ Q S LSK YGP+ +L G P +++ + KE L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 94 HDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQNFRPIRED 152
+FSGR +R G ++FS G+ W+EIR+ ++ L N + ++ ++
Sbjct: 71 LGEEFSGRGIFPLAERAN-RGFGIVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 128
Query: 153 EVSRMIESIXXXXXXXXQVNLSEKTMSLSC---NTICRLAFGKRSDGNEEAISGRSRFHT 209
E ++E + + + + T L C N IC + F KR D ++ +
Sbjct: 129 EARCLVEELRKT-----KASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQF--LNLMEK 181
Query: 210 LLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKA 269
L I+ LS + ++ Y+ F +D G +L NV + E + EH +
Sbjct: 182 LNENIEILS-SPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEH----QESM 236
Query: 270 DMQQ-EDLVDVLL---QIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLM 325
DM +D +D L + KH + T++ ++ +++F AGT+T++ TL + + L+
Sbjct: 237 DMNNPQDFIDCFLMKMEKEKHNQ-PSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLL 295
Query: 326 KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEK 385
KHP V KVQEEI ++G N+S +D + Y AVV E R P +P T
Sbjct: 296 KHPEVTAKVQEEIERVIGRNRSPCMQDR-SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD 354
Query: 386 SIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGR 445
Y IP T + ++ ++ D + + NPE F+P F+D +FK + F+PF AG+
Sbjct: 355 IKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGK 413
Query: 446 RICPGMHLGIATVDLALANLLYKFDWE 472
RIC G L + L L ++L F+ +
Sbjct: 414 RICVGEALAGMELFLFLTSILQNFNLK 440
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 234/492 (47%), Gaps = 31/492 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP +GNL Q D SF L +KYG + ++ +G P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L FSGR +A + G +IF+ GE WR +R+ + + + + ++
Sbjct: 65 IREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRS 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTM---SLSCNTICRLAFGKRSDGNEEAIS 202
++E ++E + L + T+ S++ N IC + FGKR D +
Sbjct: 123 VEERIQEEARCLVEELRKSKGA-----LLDNTLLFHSITSNIICSIVFGKRFDYKDPVF- 176
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH- 261
R L + +L +F + F G++ G R++ N+QE + F + +++H
Sbjct: 177 --LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 262 --LDPKRTKADMQQEDLVDV-LLQIRKHRGF-KVDLTLDHIKAVLMNIFVAGTDTSAATL 317
LDP + D +DV LL++ K + + ++ ++++F AGT+T++ TL
Sbjct: 235 ATLDPSNPR------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 318 VWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLL 377
+ ++K+P V ++VQ+EI ++G ++ DD ++ Y AV+ E RL P
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFG 347
Query: 378 VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437
VP T+ + GY IP T V+ + DP +E P FNP F+D + K +N
Sbjct: 348 VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEG 406
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSL-SGITVHKKN 496
F+PF G+RIC G + + L +L F P + +D+D SG+ +
Sbjct: 407 FMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPRESGVGNVPPS 464
Query: 497 FLV-LLAKYHEY 507
+ + LA++H +
Sbjct: 465 YQIRFLARHHHH 476
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 235/492 (47%), Gaps = 31/492 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP +GNL Q D SF L +KYG + ++ +G P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L FSGR +A + G +IF+ GE WR +R+ + + + + ++
Sbjct: 65 IREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRS 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTM---SLSCNTICRLAFGKRSDGNEEAIS 202
++E ++E + + L + T+ S++ N IC + FGKR D +
Sbjct: 123 VEERIQEEARCLVEEL-----RKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVF- 176
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH- 261
R L + +L +F + F G++ G R++ N+QE + F + +++H
Sbjct: 177 --LRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 262 --LDPKRTKADMQQEDLVDV-LLQIRKHRG-FKVDLTLDHIKAVLMNIFVAGTDTSAATL 317
LDP + D +DV LL++ K + + ++ ++++F AGT+T++ TL
Sbjct: 235 ATLDPSNPR------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 318 VWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLL 377
+ ++K+P V ++VQ+EI ++G ++ DD ++ Y AV+ E RL P
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFG 347
Query: 378 VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437
VP T+ + GY IP T V+ + DP +E P FNP F+D + K +N
Sbjct: 348 VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEG 406
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSL-SGITVHKKN 496
F+PF G+RIC G + + L +L F P + +D+D SG+ +
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPRESGVGNVPPS 464
Query: 497 FLV-LLAKYHEY 507
+ + LA++H +
Sbjct: 465 YQIRFLARHHHH 476
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 235/492 (47%), Gaps = 31/492 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP +GNL Q D SF L +KYG + ++ +G P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L FSGR +A + G +IF+ GE WR +R+ + + + + ++
Sbjct: 65 IREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRS 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTM---SLSCNTICRLAFGKRSDGNEEAIS 202
++E ++E + + L + T+ S++ N IC + FGKR D +
Sbjct: 123 VEERIQEEARCLVEEL-----RKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVF- 176
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH- 261
R L + +L +F + F G++ G R++ N+QE + F + +++H
Sbjct: 177 --LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 262 --LDPKRTKADMQQEDLVDV-LLQIRKHRGF-KVDLTLDHIKAVLMNIFVAGTDTSAATL 317
LDP + D +DV LL++ K + + ++ ++++F AGT+T++ TL
Sbjct: 235 ATLDPSNPR------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 318 VWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLL 377
+ ++K+P V ++VQ+EI ++G ++ DD ++ Y AV+ E RL P
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFG 347
Query: 378 VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437
VP T+ + GY IP T V+ + DP +E P FNP F+D + K +N
Sbjct: 348 VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEG 406
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSL-SGITVHKKN 496
F+PF G+RIC G + + L +L F P + +D+D SG+ +
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDIDLTPRESGVGNVPPS 464
Query: 497 FLV-LLAKYHEY 507
+ + LA++H +
Sbjct: 465 YQIRFLARHHHH 476
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 29/466 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP +GNL Q D SF L +KYG + ++ +G P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L FSGR +A + G +IF+ GE WR +R+ + + + + ++
Sbjct: 65 IREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRS 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTM---SLSCNTICRLAFGKRSDGNEEAIS 202
++E ++E + + L + T+ S++ N IC + FGKR D +
Sbjct: 123 VEERIQEEARCLVEEL-----RKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVF- 176
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH- 261
R L + +L +F + F G++ G R++ N+QE + F + +++H
Sbjct: 177 --LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 262 --LDPKRTKADMQQEDLVDV-LLQIRKHRGF-KVDLTLDHIKAVLMNIFVAGTDTSAATL 317
LDP + D +DV LL++ K + + ++ ++++F AGT+T++ TL
Sbjct: 235 ATLDPSNPR------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFAAGTETTSTTL 288
Query: 318 VWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLL 377
+ ++K+P V ++VQ+EI ++G ++ DD ++ Y AV+ E RL P
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFG 347
Query: 378 VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437
VP T+ + GY IP T V+ + DP +E P FNP F+D + K +N
Sbjct: 348 VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEG 406
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLD 483
F+PF G+RIC G + + L +L F P + +D+D
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 223/466 (47%), Gaps = 29/466 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LP +GNL Q D SF L +KYG + ++ +G P +++
Sbjct: 5 TSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L FSGR +A + G +IF+ GE WR +R+ + + + + ++
Sbjct: 65 IREALVDQAEAFSGR-GKIAVVDPIFQGYGVIFA-NGERWRALRRFSLATMRDFGMGKRS 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTM---SLSCNTICRLAFGKRSDGNEEAIS 202
++E ++E + + L + T+ S++ N IC + FGKR D +
Sbjct: 123 VEERIQEEARCLVEEL-----RKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVF- 176
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH- 261
R L + +L +F + F G++ G R++ N+QE + F + +++H
Sbjct: 177 --LRLLDLFFQSFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHR 234
Query: 262 --LDPKRTKADMQQEDLVDV-LLQIRKHRG-FKVDLTLDHIKAVLMNIFVAGTDTSAATL 317
LDP + D +DV LL++ K + + ++ ++++F AGT+T++ TL
Sbjct: 235 ATLDPSNPR------DFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTL 288
Query: 318 VWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLL 377
+ ++K+P V ++VQ+EI ++G ++ DD ++ Y AV+ E RL P
Sbjct: 289 RYGFLLMLKYPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFG 347
Query: 378 VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437
VP T+ + GY IP T V+ + DP +E P FNP F+D + K +N
Sbjct: 348 VPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEG 406
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLD 483
F+PF G+RIC G + + L +L F P + +D+D
Sbjct: 407 FMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP--VPPEDID 450
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 220/466 (47%), Gaps = 24/466 (5%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP P IGN+ Q D+ S + S+ YGP+ ++ +G PT+++ +
Sbjct: 5 TSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNF 146
KE L +F+GR SV GL + FS + W+E+R+ F+ + +NF
Sbjct: 65 VKEALVDLGEEFAGR-GSVPILEKVSKGLGIAFS-NAKTWKEMRR------FSLMTLRNF 116
Query: 147 RPIREDEVSRMIESIXXXXXXXXQVNLS--EKTMSLS---CNTICRLAFGKRSDGNEEAI 201
+ R+ E + N S + T L CN IC + F R D +E
Sbjct: 117 GMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEF 176
Query: 202 SGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH 261
+L ++ L + Y+ F +D G+ + L N F E + EH
Sbjct: 177 --LKLMESLHENVELLGTPWLQV-YNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEH 233
Query: 262 LDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTM 321
++ D +D L I+ + ++ TL+ + + ++F AGT+T++ TL +++
Sbjct: 234 ---QKLLDVNNPRDFIDCFL-IKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSL 289
Query: 322 TYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRE 381
L+KHP V +VQEEI ++G ++S +D + Y AV+ E R P +P
Sbjct: 290 LLLLKHPEVAARVQEEIERVIGRHRSPCMQDR-SRMPYTDAVIHEIQRFIDLLPTNLPHA 348
Query: 382 TTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPF 441
T Y IP T + + ++ D +A+ NP+ F+P F+D S +FK ++ F+PF
Sbjct: 349 VTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPF 407
Query: 442 GAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSL 487
AG+R+C G L + L L ++L F ++ ++ +DLD ++
Sbjct: 408 SAGKRMCVGEGLARMELFLFLTSILQNF--KLQSLVEPKDLDITAV 451
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 226/476 (47%), Gaps = 35/476 (7%)
Query: 34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKA 93
PP P G P +G++ + PH++ +S++YG ++ +RIG P L++S ++ L
Sbjct: 18 PPEPWGWPLLGHVLTLGKN-PHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVR 76
Query: 94 HDLQFSGRPASVATQRLTYNGLDLIFSP-YGEYWREIRKIC--VVHLFN--SIRAQNFRP 148
F GRP + T L +G L FS G W R++ ++ F+ S A +
Sbjct: 77 QGDDFKGRP-DLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSC 135
Query: 149 IREDEVSR----MIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKR-SDGNEEAISG 203
E+ VS+ +I + + + + N I + FG+ + ++E +S
Sbjct: 136 YLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSL 195
Query: 204 RSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLD 263
H + + + D+ P + ++ ++R + Q F Q+ + EH
Sbjct: 196 VKNTHEFVETASSGN----PLDFFPILRYLP--NPALQRFKAFNQRFLWFLQKTVQEHYQ 249
Query: 264 PKRTKADMQQEDLVDVLLQIRKH--RGFKVDLTL---DHIKAVLMNIFVAGTDTSAATLV 318
D + + D+ + KH +G + L + I ++ +IF AG DT +
Sbjct: 250 ------DFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAIS 303
Query: 319 WTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLV 378
W++ YL+ P + +K+Q+E+ +++G + D Q L YL+A + ET R P +
Sbjct: 304 WSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQ-LPYLEAFILETFRHSSFLPFTI 362
Query: 379 PRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI--DRSVDFKGKNF 436
P TT + ++G+ IP K V+VN W + DPE WE+P EF PERF+ D + K +
Sbjct: 363 PHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSE 422
Query: 437 EFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITV 492
+ + FG G+R C G L + L LA LL + ++ +PPG+K +D + G+T+
Sbjct: 423 KMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTM 475
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 212/465 (45%), Gaps = 27/465 (5%)
Query: 44 GNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA 103
G LH + P + L++K GP+ LR+G ++++S + +E + + F+GRP
Sbjct: 36 GFLHLLQPNLP-IHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ 94
Query: 104 SVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESIXX 163
+ + ++ D+ Y W+ +K+ L R+ + P + E +
Sbjct: 95 IPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRS-SMEPWVDQLTQEFCERMRV 153
Query: 164 XXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQAL--SIAF 221
V + ++ L+C+ IC L FG + D A FH + ++ +
Sbjct: 154 QAGAP--VTIQKEFSLLTCSIICYLTFGNKEDTLVHA------FHDCVQDLMKTWDHWSI 205
Query: 222 FVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLL 281
+ D PF+ + G+ R L+ ++ D ++ + H K + Q D+ D +L
Sbjct: 206 QILDMVPFLRFFPN-PGLWR-LKQAIENRDHMVEKQLRRH---KESMVAGQWRDMTDYML 260
Query: 282 Q-IRKHRGFKV--DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEI 338
Q + + R + L H+ ++++F+ GT+T+A+TL W + +L+ HP + +++QEE+
Sbjct: 261 QGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEEL 320
Query: 339 -RSL-VGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAK 396
R L G + S V D L L A + E +RL+P PL +P TT S I GY+IP
Sbjct: 321 DRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEG 380
Query: 397 TLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIA 456
+V N D WE P EF P+RF++ G N + FG G R+C G L
Sbjct: 381 MVVIPNLQGAHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGARVCLGESLARL 435
Query: 457 TVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL 501
+ + LA LL F PP L D G+ + + F V L
Sbjct: 436 ELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVRL 480
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 220/461 (47%), Gaps = 37/461 (8%)
Query: 26 TSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAK 85
TSS LPPGP LP IGN+ Q D S LSK YGP+ +L G +++ +
Sbjct: 5 TSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYE 64
Query: 86 MAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQ 144
+ KE L +FSGR +R G ++FS G+ W+EIR+ ++ L N + +
Sbjct: 65 VVKEALIDLGEEFSGRGHFPLAERAN-RGFGIVFS-NGKRWKEIRRFSLMTLRNFGMGKR 122
Query: 145 NFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAI 201
+ ++E ++E + + + + T L CN IC + F KR D ++
Sbjct: 123 SIEDRVQEEARCLVEEL-----RKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQF 177
Query: 202 SGRSRFHTLLSEIQALSIAFF--------VTDYSPFMGWIDKLTGMMRRLENNVQESDRF 253
+ L I+ +S + + DY P G +KL + +E+++ E +
Sbjct: 178 --LNLMEKLNENIRIVSTPWIQICNNFPTIIDYFP--GTHNKLLKNLAFMESDILEKVKE 233
Query: 254 YQELIDEHLDPKRTKADMQQEDLVDVLL--QIRKHRGFKVDLTLDHIKAVLMNIFVAGTD 311
+QE +D + +P+ D +D L ++ + + + T++++ ++ AGT+
Sbjct: 234 HQESMDIN-NPR---------DFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTE 283
Query: 312 TSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
T++ TL + + L+KHP V KVQEEI +VG N+S +D + Y AVV E R
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDR-GHMPYTDAVVHEVQRYI 342
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
P +P T Y IP T + + ++ D + + NPE F+P F+D +F
Sbjct: 343 DLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNF 402
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
K N+ F+PF AG+RIC G L + L L +L F+ +
Sbjct: 403 KKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 224/463 (48%), Gaps = 29/463 (6%)
Query: 40 LPFIGNLHQFD-SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQF 98
LP +G+L H +F++L KKYGP+ S+R+G T+IV ++AKE L F
Sbjct: 16 LPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDF 75
Query: 99 SGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVV--HLFNSIRAQNFRPIREDEVSR 156
SGRP + N + F+ G +W+ R++ + LF Q I E+S
Sbjct: 76 SGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKD-GDQKLEKIICQEIST 134
Query: 157 MIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQA 216
+ + + +++S N I + F + ++ ++ + I
Sbjct: 135 LCDMLATHNGQ--SIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGI--IDN 190
Query: 217 LSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDL 276
LS V D P++ T + +L+++V+ + ++++ + + R+ + ++
Sbjct: 191 LSKDSLV-DLVPWLKIFPNKT--LEKLKSHVKIRNDLLNKILENYKEKFRSDS---ITNM 244
Query: 277 VDVLLQIRKHR-----GFKVD---LTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHP 328
+D L+Q + + G D L+ +HI + +IF AG +T+ + + WT+ +L+ +P
Sbjct: 245 LDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNP 304
Query: 329 RVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII 388
+V KK+ EEI VG +++ D L L+A ++E +RL+P AP+L+P + S I
Sbjct: 305 QVKKKLYEEIDQNVGFSRTPTISDR-NRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI 363
Query: 389 DGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRS-VDFKGKNFEFIPFGAGRRI 447
+ + T V +N WA+ + + W P++F PERF++ + + ++PFGAG R
Sbjct: 364 GEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRS 423
Query: 448 CPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGI 490
C G L + L +A LL +FD E+P D SL GI
Sbjct: 424 CIGEILARQELFLIMAWLLQRFDLEVP-----DDGQLPSLEGI 461
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 210/482 (43%), Gaps = 30/482 (6%)
Query: 34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKA 93
PPGP P IGN + H+SF L+++YG + +R+G P ++++ + + L
Sbjct: 11 PPGPFAWPLIGNAAAVGQAA-HLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 94 HDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSI-RAQNFRPIRE- 151
F+ RP S A+ R+ G + F Y E+W+ R+ + N R R + E
Sbjct: 70 QGSAFADRP-SFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEG 128
Query: 152 ---DEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFH 208
E ++ + ++ T+ N + + FG R ++ F
Sbjct: 129 HVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDD------PEFR 182
Query: 209 TLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDE----HLDP 264
LLS + M W+ +R + ++ +R + I + H +
Sbjct: 183 ELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCES 242
Query: 265 KRTKADMQQEDLVDVLLQIRKHR------GFKVDLTLDHIKAVLMNIFVAGTDTSAATLV 318
R A D++D + + + G L L+++ A + +IF A DT + L
Sbjct: 243 LRPGA--APRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQ 300
Query: 319 WTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLV 378
W + ++P V +VQ E+ +VG ++ D L Y+ A + E MR P+ +
Sbjct: 301 WLLLLFTRYPDVQTRVQAELDQVVGRDR-LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTI 359
Query: 379 PRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDR-SVDFKGKNFE 437
P TT + + GY IP T+V+VN W++ DP W NPE F+P RF+D+ + K
Sbjct: 360 PHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSR 419
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNF 497
+ F G+R C G L + L ++ L ++ D+ P + ++F G+T+ K+F
Sbjct: 420 VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPN-EPAKMNFS--YGLTIKPKSF 476
Query: 498 LV 499
V
Sbjct: 477 KV 478
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 226/492 (45%), Gaps = 31/492 (6%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LPFIGN Q ++ + + S ++S++YGP+ ++ +G +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
KE L +FSGR AT + G + FS GE +++R+ + L + +
Sbjct: 65 VKEALVDQAEEFSGR-GEQATFDWLFKGYGVAFS-NGERAKQLRRFSIATLRGFGVGKRG 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
++E +I+++ N+ + T LS N I + FG R D ++
Sbjct: 123 IEERIQEEAGFLIDALRGTHG----ANI-DPTFFLSRTVSNVISSIVFGDRFDYEDK--- 174
Query: 203 GRSRFHTLLSEIQALSIAFFVTD----YSPFMGWIDKLTGMMRRLENNVQESDRFYQELI 258
F +LL + S F T Y F + L G ++ +Q + F + +
Sbjct: 175 ---EFLSLLRMMLG-SFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKV 230
Query: 259 DEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLM---NIFVAGTDTSAA 315
+ + +RT D +D L IR K T ++K ++M N+F AGT+T +
Sbjct: 231 EHN---QRTLDPNSPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVST 286
Query: 316 TLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
TL + LMKHP V KV EEI ++G N+ ED + + Y +AV+ E R P
Sbjct: 287 TLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYTEAVIHEIQRFGDMLP 345
Query: 376 LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKN 435
+ + + + + +P T V+ ++ RDP + NP +FNP+ F+D+ FK K+
Sbjct: 346 MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFK-KS 404
Query: 436 FEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKK 495
F+PF G+R C G L + L ++ F ++ P K D+ + T+ +
Sbjct: 405 DAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFATIPRN 464
Query: 496 NFLVLLAKYHEY 507
+ L ++H +
Sbjct: 465 YTMSFLPRHHHH 476
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 228/494 (46%), Gaps = 35/494 (7%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LPFIGN Q ++ + + S ++S++YGP+ ++ +G +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L +FSGR AT + G ++FS GE +++R+ + L + + +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRG 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
++E +I+++ + T LS N I + FG R D ++
Sbjct: 123 IEERIQEEAGFLIDALRGTGGANI-----DPTFFLSRTVSNVISSIVFGDRFDYKDKE-- 175
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID--- 259
LS ++ + +F T S + + + +M+ L Q++ + Q L D
Sbjct: 176 -------FLSLLRMMLGSFQFTSTSTGQLY-EMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 260 ---EHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLM---NIFVAGTDTS 313
EH +RT D +D L IR K T ++K ++M N+F AGT+T
Sbjct: 228 KKVEH--NQRTLDPNSPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETV 284
Query: 314 AATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPP 373
+ TL + LMKHP V KV EEI ++G N+ ED + + Y++AV+ E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDV 343
Query: 374 APLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKG 433
P+ + R + + + +P T VY ++ RDP + NP++FNP+ F++ FK
Sbjct: 344 IPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK- 402
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVH 493
K+ F+PF G+R C G L + L ++ F + K D+ + T+
Sbjct: 403 KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 494 KKNFLVLLAKYHEY 507
+ + L ++H +
Sbjct: 463 RNYTMSFLPRHHHH 476
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 226/494 (45%), Gaps = 35/494 (7%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LPFIGN Q ++ + + S ++S++YGP+ ++ +G +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L +FSGR AT + G ++FS GE +++R+ + L + + +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRG 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
++E +I+++ + T LS N I + FG R D ++
Sbjct: 123 IEERIQEEAGFLIDALRGTGGANI-----DPTFFLSRTVSNVISSIVFGDRFDYKDKE-- 175
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID--- 259
LS ++ + F T S + + + +M+ L Q++ + Q L D
Sbjct: 176 -------FLSLLRMMLGIFQFTSTSTGQLY-EMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 260 ---EHLDPKRTKADMQQEDLVDVLLQIR---KHRGFKVDLTLDHIKAVLMNIFVAGTDTS 313
EH +RT D +D L IR + + + L ++ +N+F+ GT+T
Sbjct: 228 KKVEH--NQRTLDPNSPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETV 284
Query: 314 AATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPP 373
+ TL + LMKHP V KV EEI ++G N+ ED + + Y++AV+ E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDV 343
Query: 374 APLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKG 433
P+ + R + + + +P T VY ++ RDP + NP++FNP+ F++ FK
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK- 402
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVH 493
K+ F+PF G+R C G L + L ++ F + K D+ + T+
Sbjct: 403 KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 494 KKNFLVLLAKYHEY 507
+ + L ++H +
Sbjct: 463 RNYTMSFLPRHHHH 476
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 225/494 (45%), Gaps = 35/494 (7%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LPFIGN Q ++ + + S ++S++YGP+ ++ +G +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L +FSGR AT + G ++FS GE +++R+ + L + + +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRG 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
++E +I+++ + T LS N I + FG R D ++
Sbjct: 123 IEERIQEEAGFLIDALRGTGGANI-----DPTFFLSRTVSNVISSIVFGDRFDYKDKE-- 175
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID--- 259
LS ++ + F T S + + + +M+ L Q++ + Q L D
Sbjct: 176 -------FLSLLRMMLGIFQFTSTSTGQLY-EMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 260 ---EHLDPKRTKADMQQEDLVDVLLQIR---KHRGFKVDLTLDHIKAVLMNIFVAGTDTS 313
EH +RT D +D L IR + + + L ++ + +FV GT+T
Sbjct: 228 KKVEH--NQRTLDPNSPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETV 284
Query: 314 AATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPP 373
+ TL + LMKHP V KV EEI ++G N+ ED + + Y++AV+ E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDV 343
Query: 374 APLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKG 433
P+ + R + + + +P T VY ++ RDP + NP++FNP+ F++ FK
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK- 402
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVH 493
K+ F+PF G+R C G L + L ++ F + K D+ + T+
Sbjct: 403 KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 494 KKNFLVLLAKYHEY 507
+ + L ++H +
Sbjct: 463 RNYTMSFLPRHHHH 476
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 222/488 (45%), Gaps = 23/488 (4%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LPFIGN Q ++ + + S ++S++YGP+ ++ +G +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L +FSGR AT + G ++FS GE +++R+ + L + + +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRG 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
++E +I+++ + T LS N I + FG R D ++
Sbjct: 123 IEERIQEEAGFLIDALRGTGGANI-----DPTFFLSRTVSNVISSIVFGDRFDYKDKEFL 177
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHL 262
R + + + S Y F + L G ++ +Q + F + ++ +
Sbjct: 178 SLLRMMLGIFQFTSTSTGQL---YEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHN- 233
Query: 263 DPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLM---NIFVAGTDTSAATLVW 319
+RT D +D L IR K T ++K ++M +F+ GT+T + TL +
Sbjct: 234 --QRTLDPNSPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRY 290
Query: 320 TMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVP 379
LMKHP V KV EEI ++G N+ ED + + Y++AV+ E R P+ +
Sbjct: 291 GFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDVIPMSLA 349
Query: 380 RETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439
R + + + +P T VY ++ RDP + NP++FNP+ F++ FK K+ F+
Sbjct: 350 RRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK-KSDAFV 408
Query: 440 PFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
PF G+R C G L + L ++ F + K D+ + T+ + +
Sbjct: 409 PFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMS 468
Query: 500 LLAKYHEY 507
L ++H +
Sbjct: 469 FLPRHHHH 476
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 225/494 (45%), Gaps = 35/494 (7%)
Query: 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKM 86
+S LPPGP LPFIGN Q ++ + + S ++S++YGP+ ++ +G +++
Sbjct: 5 TSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDA 64
Query: 87 AKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQN 145
+E L +FSGR AT + G ++FS GE +++R+ + L + + +
Sbjct: 65 VREALVDQAEEFSGR-GEQATFDWVFKGYGVVFS-NGERAKQLRRFSIATLRDFGVGKRG 122
Query: 146 FRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLS---CNTICRLAFGKRSDGNEEAIS 202
++E +I+++ + T LS N I + FG R D ++
Sbjct: 123 IEERIQEEAGFLIDALRGTGGANI-----DPTFFLSRTVSNVISSIVFGDRFDYKDKE-- 175
Query: 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID--- 259
LS ++ + F T S + + + +M+ L Q++ + Q L D
Sbjct: 176 -------FLSLLRMMLGIFQFTSTSTGQLY-EMFSSVMKHLPGPQQQAFQLLQGLEDFIA 227
Query: 260 ---EHLDPKRTKADMQQEDLVDVLLQIR---KHRGFKVDLTLDHIKAVLMNIFVAGTDTS 313
EH +RT D +D L IR + + + L ++ + +F+ GT+T
Sbjct: 228 KKVEH--NQRTLDPNSPRDFIDSFL-IRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETV 284
Query: 314 AATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPP 373
+ TL + LMKHP V KV EEI ++G N+ ED + + Y++AV+ E R
Sbjct: 285 STTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAK-MPYMEAVIHEIQRFGDV 343
Query: 374 APLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKG 433
P+ + R + + + +P T VY ++ RDP + NP++FNP+ F++ FK
Sbjct: 344 IPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK- 402
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVH 493
K+ F+PF G+R C G L + L ++ F + K D+ + T+
Sbjct: 403 KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP 462
Query: 494 KKNFLVLLAKYHEY 507
+ + L ++H +
Sbjct: 463 RNYTMSFLPRHHHH 476
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 207/445 (46%), Gaps = 23/445 (5%)
Query: 45 NLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPAS 104
NL Q D SF +KYG + ++ +G P +++ + +E L FSGR
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGR-GK 81
Query: 105 VATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFN-SIRAQNFRPIREDEVSRMIESIXX 163
+A + G +IF+ G W+ +R+ V + + + ++ ++E +IE +
Sbjct: 82 IAMVDPFFRGYGVIFAN-GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRK 140
Query: 164 XXXXXXQVNLSEKTMSLSCNTICRLAFGKRSD-GNEEAISGRSRFHTLLSEIQALSIAFF 222
+ S++ N IC + FGKR ++E + + F+ S I ++ F
Sbjct: 141 SKGALMDPTFLFQ--SITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSV----F 194
Query: 223 VTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH---LDPKRTKADMQQEDLVDV 279
+ F G++ G R++ N+QE + + +++H LDP + DL+D
Sbjct: 195 GQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPR------DLIDT 248
Query: 280 -LLQIRKHR-GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE 337
LL + K + + + ++ +++F AGT+T++ TL + ++K+P V ++V E
Sbjct: 249 YLLHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYRE 308
Query: 338 IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKT 397
I ++G ++ + D ++ Y +AV+ E R P+ VP T+ + GY IP T
Sbjct: 309 IEQVIGPHRP-PELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDT 367
Query: 398 LVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIAT 457
V++ DP +E P+ FNP+ F+D + K K FIPF G+RIC G + A
Sbjct: 368 EVFLILSTALHDPHYFEKPDAFNPDHFLDANGALK-KTEAFIPFSLGKRICLGEGIARAE 426
Query: 458 VDLALANLLYKFDWEMPPGMKKQDL 482
+ L +L F P + DL
Sbjct: 427 LFLFFTTILQNFSMASPVAPEDIDL 451
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 193/436 (44%), Gaps = 31/436 (7%)
Query: 57 SFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYN--G 114
F +L +++G + SL++ + P ++++ +E L H + RP TQ L +
Sbjct: 35 CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRS 94
Query: 115 LDLIFSPYGEYWREIRKICVVHLFN-SIRAQNFRPIREDEVSRMIESIXXXXXXXXQVN- 172
+ + YG WRE R+ V L N + ++ +E + + + + N
Sbjct: 95 QGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNG 154
Query: 173 LSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQ---ALSIAFF--VTDYS 227
L +K +S N I L G+R + ++ RF LL Q F V +
Sbjct: 155 LLDKAVS---NVIASLTCGRRFEYDD------PRFLRLLDLAQEGLKEESGFLREVLNAV 205
Query: 228 PFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH---LDPKRTKADMQQEDLVDVLLQIR 284
P + I L G + R + EL+ EH DP + D+ + L ++
Sbjct: 206 PVLLHIPALAGKVLRFQKAFLTQ---LDELLTEHRMTWDPAQPPRDLTEA----FLAEME 258
Query: 285 KHRGF-KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVG 343
K +G + ++++ V+ ++F AG T++ TL W + ++ HP V ++VQ+EI ++G
Sbjct: 259 KAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
Query: 344 GNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNA 403
+ + D + Y AV+ E R PL V T+ + G+ IP T + N
Sbjct: 319 QVRR-PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNL 377
Query: 404 WAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALA 463
++ +D WE P F+PE F+D F K F+PF AGRR C G L + L
Sbjct: 378 SSVLKDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 464 NLLYKFDWEMPPGMKK 479
+LL F + +P G +
Sbjct: 437 SLLQHFSFSVPTGQPR 452
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 192/436 (44%), Gaps = 31/436 (7%)
Query: 57 SFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYN--G 114
F +L +++G + SL++ + P ++++ +E L H + RP TQ L +
Sbjct: 35 CFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRS 94
Query: 115 LDLIFSPYGEYWREIRKICVVHLFN-SIRAQNFRPIREDEVSRMIESIXXXXXXXXQVN- 172
+ + YG WRE R+ V L N + ++ +E + + + + N
Sbjct: 95 QGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNG 154
Query: 173 LSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQ---ALSIAFF--VTDYS 227
L +K +S N I L G+R + ++ RF LL Q F V +
Sbjct: 155 LLDKAVS---NVIASLTCGRRFEYDD------PRFLRLLDLAQEGLKEESGFLREVLNAV 205
Query: 228 PFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH---LDPKRTKADMQQEDLVDVLLQIR 284
P I L G + R + EL+ EH DP + D+ + L ++
Sbjct: 206 PVDRHIPALAGKVLRFQKAFLTQ---LDELLTEHRMTWDPAQPPRDLTEA----FLAEME 258
Query: 285 KHRGF-KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVG 343
K +G + ++++ V+ ++F AG T++ TL W + ++ HP V ++VQ+EI ++G
Sbjct: 259 KAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIG 318
Query: 344 GNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNA 403
+ + D + Y AV+ E R PL + T+ + G+ IP T + N
Sbjct: 319 QVRR-PEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNL 377
Query: 404 WAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALA 463
++ +D WE P F+PE F+D F K F+PF AGRR C G L + L
Sbjct: 378 SSVLKDEAVWEKPFRFHPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFT 436
Query: 464 NLLYKFDWEMPPGMKK 479
+LL F + +P G +
Sbjct: 437 SLLQHFSFSVPTGQPR 452
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 205/466 (43%), Gaps = 29/466 (6%)
Query: 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL 110
S PHV + S+ YG + SL +G + T++++ + KE L F+ RP ++
Sbjct: 33 SELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKM 92
Query: 111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSIR-----AQNFRPIREDEVSRMIESIXXXX 165
T G L+ S YG W + R++ V NS R ++F +E ++I
Sbjct: 93 TKMG-GLLNSRYGRGWVDHRRLAV----NSFRYFGYGQKSFESKILEETKFFNDAIETYK 147
Query: 166 XXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTD 225
+ + + N + FG+R + + E+ A S + F+ +
Sbjct: 148 GR--PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAA-SASVFLYN 204
Query: 226 YSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRK 285
P++G + G ++L N F LI++ + + VD L
Sbjct: 205 AFPWIGILP--FGKHQQLFRNAAVVYDFLSRLIEK---ASVNRKPQLPQHFVDAYLD-EM 258
Query: 286 HRGFKVDLTLDHIKAVLM----NIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSL 341
+G K D + K L+ + +AGT+T+ L W + ++ +P + +VQ+EI +
Sbjct: 259 DQG-KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 342 VGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYV 401
+G N DD ++ Y +AV+ E +R PL + T+E +++ GY IP T V
Sbjct: 318 MGPNGK-PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT 376
Query: 402 NAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLA 461
N +++ D + W +PE F+PERF+D S F K +PF GRR C G HL + L
Sbjct: 377 NLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLF 435
Query: 462 LANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEY 507
LL +F P + D G+T+ + +L+ + H +
Sbjct: 436 FTALLQRFHLHFPHELVP---DLKPRLGMTLQPQPYLICAERRHHH 478
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 202/458 (44%), Gaps = 29/458 (6%)
Query: 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL 110
S PHV + S+ YG + SL +G + T++++ + KE L F+ RP ++
Sbjct: 33 SELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKM 92
Query: 111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSIR-----AQNFRPIREDEVSRMIESIXXXX 165
T G L+ S YG W + R++ V NS R ++F +E ++I
Sbjct: 93 TKMG-GLLNSRYGRGWVDHRRLAV----NSFRYFGYGQKSFESKILEETKFFNDAIETYK 147
Query: 166 XXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTD 225
+ + + N + FG+R + + E+ A S + F+ +
Sbjct: 148 GR--PFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAA-SASVFLYN 204
Query: 226 YSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRK 285
P++G + G ++L N F LI++ + + VD L
Sbjct: 205 AFPWIGILP--FGKHQQLFRNAAVVYDFLSRLIEK---ASVNRKPQLPQHFVDAYLD-EM 258
Query: 286 HRGFKVDLTLDHIKAVLM----NIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSL 341
+G K D + K L+ + +AGT+T+ L W + ++ +P + +VQ+EI +
Sbjct: 259 DQG-KNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 342 VGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYV 401
+G N DD ++ Y +AV+ E +R PL + T+E +++ GY IP T V
Sbjct: 318 MGPNGK-PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVIT 376
Query: 402 NAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLA 461
N +++ D + W +PE F+PERF+D S F K +PF GRR C G HL + L
Sbjct: 377 NLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLF 435
Query: 462 LANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
LL +F P + D G+T+ + +L+
Sbjct: 436 FTALLQRFHLHFPHELVP---DLKPRLGMTLQPQPYLI 470
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 199/469 (42%), Gaps = 72/469 (15%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFW----ELSKKYGPLMSLRIGFVPTLIVSSAKMAKET 90
PGP LPF+GN+ + H F E KKYG + G P L ++ M K
Sbjct: 19 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 73
Query: 91 LKAHDLQFSGRPASVATQRLTYNGLDLIFSPYG----EYWREIRKICVVHLFNSIRAQNF 146
L SV T R + + + S E W+ +R + + F S + +
Sbjct: 74 LVKECY-------SVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSL-LSPTFTSGKLKEM 125
Query: 147 RPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGK-------------- 192
PI ++ ++ V L + + S + I +FG
Sbjct: 126 VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 185
Query: 193 ------RSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMR--RLE 244
R D + + F L+ ++ L+I F + + F+ K M+ RLE
Sbjct: 186 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFL---RKSVKRMKESRLE 242
Query: 245 NNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMN 304
+ + F Q +ID + K T++ DL V I
Sbjct: 243 DTQKHRVDFLQLMIDSQ-NSKETESHKALSDLELVAQSI--------------------- 280
Query: 305 IFV-AGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363
IF+ AG +T+++ L + M L HP V +K+QEEI +++ NK+ D V ++ YL V
Sbjct: 281 IFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMV 339
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V ET+RL P A + + R + I+G IP +V + ++A+ RDP+ W PE+F PER
Sbjct: 340 VNETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 398
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F ++ D + + PFG+G R C GM + + LAL +L F ++
Sbjct: 399 FSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 199/469 (42%), Gaps = 72/469 (15%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFW----ELSKKYGPLMSLRIGFVPTLIVSSAKMAKET 90
PGP LPF+GN+ + H F E KKYG + G P L ++ M K
Sbjct: 17 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 71
Query: 91 LKAHDLQFSGRPASVATQRLTYNGLDLIFSPYG----EYWREIRKICVVHLFNSIRAQNF 146
L SV T R + + + S E W+ +R + + F S + +
Sbjct: 72 LVKECY-------SVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSL-LSPTFTSGKLKEM 123
Query: 147 RPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGK-------------- 192
PI ++ ++ V L + + S + I +FG
Sbjct: 124 VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 183
Query: 193 ------RSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMR--RLE 244
R D + + F L+ ++ L+I F + + F+ K M+ RLE
Sbjct: 184 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFL---RKSVKRMKESRLE 240
Query: 245 NNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMN 304
+ + F Q +ID + K T++ DL V I
Sbjct: 241 DTQKHRVDFLQLMIDSQ-NSKETESHKALSDLELVAQSI--------------------- 278
Query: 305 IFV-AGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363
IF+ AG +T+++ L + M L HP V +K+QEEI +++ NK+ D V ++ YL V
Sbjct: 279 IFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMV 337
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V ET+RL P A + + R + I+G IP +V + ++A+ RDP+ W PE+F PER
Sbjct: 338 VNETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 396
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F ++ D + + PFG+G R C GM + + LAL +L F ++
Sbjct: 397 FSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 199/469 (42%), Gaps = 72/469 (15%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFW----ELSKKYGPLMSLRIGFVPTLIVSSAKMAKET 90
PGP LPF+GN+ + H F E KKYG + G P L ++ M K
Sbjct: 18 PGPTPLPFLGNILSY-----HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTV 72
Query: 91 LKAHDLQFSGRPASVATQRLTYNGLDLIFSPYG----EYWREIRKICVVHLFNSIRAQNF 146
L SV T R + + + S E W+ +R + + F S + +
Sbjct: 73 LVKECY-------SVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSL-LSPTFTSGKLKEM 124
Query: 147 RPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGK-------------- 192
PI ++ ++ V L + + S + I +FG
Sbjct: 125 VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVE 184
Query: 193 ------RSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMR--RLE 244
R D + + F L+ ++ L+I F + + F+ K M+ RLE
Sbjct: 185 NTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFL---RKSVKRMKESRLE 241
Query: 245 NNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMN 304
+ + F Q +ID + K T++ DL V I
Sbjct: 242 DTQKHRVDFLQLMIDSQ-NSKETESHKALSDLELVAQSI--------------------- 279
Query: 305 IFV-AGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363
IF+ AG +T+++ L + M L HP V +K+QEEI +++ NK+ D V ++ YL V
Sbjct: 280 IFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLP-NKAPPTYDTVLQMEYLDMV 338
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V ET+RL P A + + R + I+G IP +V + ++A+ RDP+ W PE+F PER
Sbjct: 339 VNETLRLFPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPER 397
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F ++ D + + PFG+G R C GM + + LAL +L F ++
Sbjct: 398 FSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 194/428 (45%), Gaps = 31/428 (7%)
Query: 58 FWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKA----HDLQFSGRPASVATQRLTYN 113
F + +KKYGP++ + + ++IV+S + K+ L + D + +V +RL
Sbjct: 16 FLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQ 75
Query: 114 GLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESIXXXXXXXXQVNL 173
GL + E W + R++ + S E + +++E + V++
Sbjct: 76 GL--VSECNYERWHKQRRVIDLAFSRSSLVSLMETFNE-KAEQLVEILEAKADGQTPVSM 132
Query: 174 SEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALS--IAFFVTDYSPFMG 231
+ + + + + AFG + LL + LS + + +
Sbjct: 133 QDMLTYTAMDILAKAAFGMETS-------------MLLGAQKPLSQAVKLMLEGITASRN 179
Query: 232 WIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRK-HRGFK 290
+ K R+ V+ES RF +++ + + +R +E D+L QI K G +
Sbjct: 180 TLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQ 239
Query: 291 VDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVD 350
D + + + F+AG +TSA L +T+ L + P ++ ++Q E+ ++G +K ++D
Sbjct: 240 DD---EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIG-SKRYLD 295
Query: 351 EDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDP 410
+D+ L YL V+KE++RL PPA R E+++IDG +P T + + + +GR
Sbjct: 296 FEDLGRLQYLSQVLKESLRLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMD 354
Query: 411 EAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD 470
+E+P FNP+RF F + PF G R C G V + +A LL + +
Sbjct: 355 TYFEDPLTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLE 411
Query: 471 WEMPPGMK 478
+ + PG +
Sbjct: 412 FRLVPGQR 419
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 204/453 (45%), Gaps = 44/453 (9%)
Query: 35 PGPKGLPFIGNLHQF----DSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAK-- 88
PGP P +G+L + K H + E KKYG + +++G ++ + S + +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 89 -ETLKAHDLQFSGRP-ASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNF 146
T AH + +P + R GL ++ G+ W+ +R L +
Sbjct: 87 YRTESAHPQRLEIKPWKAYRDHRNEAYGLMIL---EGQEWQRVRSAFQKKLMKPVEIMKL 143
Query: 147 RPIREDEVSRMIESIXXXXXXXXQV-NLSEKTMSLSCNTICRLAFGKR-----SDGNEEA 200
+ ++ +E + ++ +L + S +IC + + KR + EEA
Sbjct: 144 DKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEA 203
Query: 201 ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDE 260
+ T ++ I+ + F +P + +RL V ++ + I +
Sbjct: 204 L-------TFITAIKTMMSTFGKMMVTP--------VELHKRLNTKVWQAHTLAWDTIFK 248
Query: 261 HLDP---KRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATL 317
+ P R + QQ D L I + L+ + A + + +A +T+A +L
Sbjct: 249 SVKPCIDNRLQRYSQQPG-ADFLCDIYQQD----HLSKKELYAAVTELQLAAVETTANSL 303
Query: 318 VWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLL 377
+W + L ++P+ +++ +E++S++ N++ ED ++ + YLKA +KE+MRL P P
Sbjct: 304 MWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAED-LRNMPYLKACLKESMRLTPSVPFT 362
Query: 378 VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437
R + +++ Y +P T++ +N +G + +E+ +F PER++ + + K F
Sbjct: 363 T-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQK--EKKINPFA 419
Query: 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFD 470
+PFG G+R+C G L + LAL ++ K+D
Sbjct: 420 HLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 20/255 (7%)
Query: 252 RFYQELIDEHL-----DPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIF 306
RF L D HL +R + + +DL+ LL+ + G + H + V I
Sbjct: 215 RFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVV--AIL 272
Query: 307 VAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKE 366
G++T A+T++W + L HP ++++E+ ++ GG V +DV++L + V+ E
Sbjct: 273 TPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP--VAFEDVRKLRHTGNVIVE 330
Query: 367 TMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI- 425
MRL+P +L R E S + GY IPA + + +AI RDP+++++ EF+P+R++
Sbjct: 331 AMRLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLP 389
Query: 426 DRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFD 485
+R+ + + PF AG+R CP H +A + L A L K+ +E G D
Sbjct: 390 ERAANV--PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN------D 441
Query: 486 SLS-GITVHKKNFLV 499
++ GIT+ + LV
Sbjct: 442 AVRVGITLRPHDLLV 456
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 202/472 (42%), Gaps = 60/472 (12%)
Query: 29 YASSLPPGPKGLPFIGNLHQF----DSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSA 84
Y+ PG G NL+ F S + H E +KYGP+ ++G + ++ +
Sbjct: 10 YSEIPSPGDNGW---LNLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLESVYIIHP 66
Query: 85 KMAKETLKAHDLQFSGR-------PASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHL 137
+ AH +F G P +A R + ++F G W++ R + +
Sbjct: 67 EDV-----AHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGT-WKKDRVVLNTEV 120
Query: 138 FNSIRAQNF----RPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKR 193
+NF P+ +D VS + + I ++ E + +I + FG+R
Sbjct: 121 MAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGER 180
Query: 194 SDGNEEAISGRSR---------FHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLE 244
EE ++ ++ FHT + L++ + W D +
Sbjct: 181 LGMLEETVNPEAQKFIDAVYKMFHT---SVPLLNVPPELYRLFRTKTWRDHVAAWDTIFN 237
Query: 245 NNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMN 304
+ ++ FYQ+L +R ++ LL+ K + L+ +KA +
Sbjct: 238 KAEKYTEIFYQDL-------RRKTEFRNYPGILYCLLKSEK-------MLLEDVKANITE 283
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEI---RSLVGGNKSFVDEDDVQELHYLK 361
+ G +T++ TL W + + + V + ++EE+ R G+ S + +Q + LK
Sbjct: 284 MLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKM----LQMVPLLK 339
Query: 362 AVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP 421
A +KET+RL P + + + R ++ Y IPAKTLV V +A+GRDP + +P++F+P
Sbjct: 340 ASIKETLRLHPIS-VTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDP 398
Query: 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
R++ + D +F + FG G R C G + + L L ++L F EM
Sbjct: 399 TRWLSKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 231 GWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFK 290
GW+ L RR + + D FY+ + KR ++ + +D++ LL G
Sbjct: 195 GWL-PLPSFRRRDRAHREIKDIFYKAI------QKRRQSQEKIDDILQTLLDATYKDG-- 245
Query: 291 VDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVD 350
LT D + +L+ + +AG TS+ T W +L + + KK E +++ G N +
Sbjct: 246 RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLT 305
Query: 351 EDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDP 410
D +++L+ L +KET+RL+PP +++ T +++ GY IP V V+ R
Sbjct: 306 YDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVA-GYTIPPGHQVCVSPTVNQRLK 364
Query: 411 EAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANL--LYK 468
++W +FNP+R++ + G+ F ++PFGAGR C G + + + + LY+
Sbjct: 365 DSWVERLDFNPDRYLQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYE 423
Query: 469 FD 470
FD
Sbjct: 424 FD 425
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
Query: 289 FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSF 348
K +L+L+ IKA M + DT+A L+ T+ L ++P V + +++E + + S
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLA-AAASISE 327
Query: 349 VDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGR 408
+ EL L+A +KET+RL P L + R + ++ Y IPA TLV V +++GR
Sbjct: 328 HPQKATTELPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGR 386
Query: 409 DPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPG 450
+ + PE +NP+R++D + G+NF +PFG G R C G
Sbjct: 387 NAALFPRPERYNPQRWLD--IRGSGRNFHHVPFGFGMRQCLG 426
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 270 DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPR 329
D D++DVL+ ++ G + D I + +++ AG TS+ T WT+ LM+H
Sbjct: 219 DKSDRDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIID 389
V +E+ L G +S V ++++ L+ V+KET+RL PP +L+ R + +
Sbjct: 278 AYAAVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQ 335
Query: 390 GYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449
G+ I LV + R PE + +P +F P R+ + + +IPFGAGR C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
Query: 450 GMHLGIATVDLALANLLYKFDWEM--PPGMKKQD 481
G I + + LL ++++EM PP + D
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRND 429
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 270 DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPR 329
D D++DVL+ ++ G + D I + +++ AG TS+ T WT+ LM+H
Sbjct: 219 DKSDRDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIID 389
V +E+ L G +S V ++++ L+ V+KET+RL PP +L+ R + +
Sbjct: 278 AYAAVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQ 335
Query: 390 GYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449
G+ I LV + R PE + +P +F P R+ + + +IPFGAGR C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
Query: 450 GMHLGIATVDLALANLLYKFDWEM--PPGMKKQD 481
G I + + LL ++++EM PP + D
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRND 429
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 270 DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPR 329
D D++DVL+ ++ G + D I + +++ AG TS+ T WT+ LM+H
Sbjct: 219 DKSDRDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIID 389
V +E+ L G +S V ++++ L+ V+KET+RL PP +L+ R + +
Sbjct: 278 AYAAVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQ 335
Query: 390 GYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449
G+ I LV + R PE + +P +F P R+ + + +IPFGAGR C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
Query: 450 GMHLGIATVDLALANLLYKFDWEM--PPGMKKQD 481
G I + + LL ++++EM PP + D
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRND 429
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 5/214 (2%)
Query: 270 DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPR 329
D D++DVL+ ++ G + D I + +++ AG TS+ T WT+ LM+H
Sbjct: 219 DKSDRDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 330 VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIID 389
V +E+ L G +S V ++++ L+ V+KET+RL PP +L+ R + +
Sbjct: 278 AYAAVIDELDELYGDGRS-VSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQ 335
Query: 390 GYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449
G+ I LV + R PE + +P +F P R+ + + +IPFGAGR C
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395
Query: 450 GMHLGIATVDLALANLLYKFDWEM--PPGMKKQD 481
G I + + LL ++++EM PP + D
Sbjct: 396 GAAFAIMQIKAIFSVLLREYEFEMAQPPESYRND 429
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 197/459 (42%), Gaps = 56/459 (12%)
Query: 31 SSLPPGPKGL-PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKE 89
LPP G PF+G++ QF P + KKYG + ++ I +V
Sbjct: 2 GKLPPVVHGTTPFVGHIIQF-GKDPLGFMLKAKKKYGGIFTMNICGNRITVVGD------ 54
Query: 90 TLKAHDLQFSGRPASVATQRLTYNGLDLIF-------SPYGEYWREIRKICVVHLFNSIR 142
+ H F+ R + + R Y+ + +F +PY ++ + +
Sbjct: 55 -VHQHSKFFTPR-NEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFL--AEELTVAK 110
Query: 143 AQNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNE 198
QNF P + EV + +++ ++N+ + ++ NT C+ FG KR D +
Sbjct: 111 FQNFAPSIQHEVRKFMKA--NWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDARQ 168
Query: 199 EAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLT-GMMRRLENNVQESDRFYQEL 257
F LL+++++ I V F+ WI KL R + E E+
Sbjct: 169 --------FAQLLAKMESCLIPAAV-----FLPWILKLPLPQSYRCRDARAELQDILSEI 215
Query: 258 IDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATL 317
I + + + D DL+ LL G + ++ + +++ AG TS T
Sbjct: 216 IIAR-EKEEAQKDTNTSDLLAGLLGAVYRDGTR--MSQHEVCGMIVAAMFAGQHTSTITT 272
Query: 318 VWTMTYLM--KHPRVMKKVQEEIRSLVGGNKSFVDEDDV-QELHYLKAVVKETMRLQPPA 374
W++ +LM ++ R + K+ +EI + ++ D+V +E+ + + +E++R PP
Sbjct: 273 TWSLLHLMDPRNKRHLAKLHQEIDEF----PAQLNYDNVMEEMPFAEQCARESIRRDPPL 328
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
+L+ R+ + + Y +P ++ + +D EA+ NP E+NPER + K
Sbjct: 329 VMLM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER------NMKLV 381
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
+ F FGAG C G G+ V LA +L +D+E+
Sbjct: 382 DGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 123/237 (51%), Gaps = 16/237 (6%)
Query: 235 KLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVL--LQIRKHRGFKVD 292
K++ + ++ E +V++ + LI E +R + + E+ +D L + + RG D
Sbjct: 236 KISWLYKKYEKSVKDLKDAIEVLIAE--KRRRISTEEKLEECMDFATELILAEKRG---D 290
Query: 293 LTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDED 352
LT +++ ++ + +A DT + +L + + + KHP V + + +EI++++G + D
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD--IKID 348
Query: 353 DVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEA 412
D+Q+L ++ + E+MR QP LV R+ E +IDGY + T + +N + R E
Sbjct: 349 DIQKLKVMENFIYESMRYQPVVD-LVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEF 406
Query: 413 WENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ P EF E F ++V ++ F PFG G R C G ++ + + L LL +F
Sbjct: 407 FPKPNEFTLENF-AKNVPYR----YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 195/491 (39%), Gaps = 76/491 (15%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYISSQRLVKEACDES 66
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL ++ + + W++ R I + L + + + D
Sbjct: 67 RFDKNLSQARKFVRDFAGDGLATSWT-HEKNWKKARNILLPRLSQQA-MKGYHAMMVDIA 124
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 125 VQLVQK-WERLNSDEHIEVPEDMTRLTLDTIGLCGFNYRIN------------------- 164
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLE---NNVQES---DRFYQELIDEHLDPKRTK 268
+F+ PF +T M+R L+ N +Q + D Y E + ++ +
Sbjct: 165 -----SFYRDQPHPF------ITSMVRALDEVMNKLQRANPDDPAYDE------NKRQFQ 207
Query: 269 ADMQ-QEDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGT 310
D++ DLVD ++ RK G + D L H I+ ++ +AG
Sbjct: 208 EDIKVMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGH 267
Query: 311 DTSAATLVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMR 369
+T++ L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +R
Sbjct: 268 ETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALR 324
Query: 370 LQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRS 428
+ P AP + + Y + + V + RD W ++ EEF PERF + S
Sbjct: 325 IWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS 384
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLS 488
F PFG G+R C G + L L +L FD+E + + D
Sbjct: 385 A---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-----DHTNYELDIEE 436
Query: 489 GITVHKKNFLV 499
+T+ K F++
Sbjct: 437 TLTLKPKGFVI 447
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 195/459 (42%), Gaps = 48/459 (10%)
Query: 27 SSYASSLPPG-PKGLPFIGNLHQFDSSKPHVSFWELSKK--YGPLMSLRIGFVPTLIVSS 83
+S LPP P +PF+G++ QF K + F + K+ + ++ IG IV
Sbjct: 2 TSGKGKLPPVYPVTVPFLGHIVQF--GKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGD 59
Query: 84 AKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIF-------SPYGEYWREIRKICVVH 136
H FS R + + R Y + +F +PY ++ +
Sbjct: 60 PH-------EHSRFFSPR-NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFL--AE 109
Query: 137 LFNSIRAQNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDG 196
+ QNF P + EV + + +NL E ++ NT C+ FG +
Sbjct: 110 ELTIAKFQNFVPAIQHEVRKFMAE--NWKEDEGVINLLEDCGAMIINTACQCLFG---ED 164
Query: 197 NEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLT-GMMRRLENNVQESDRFYQ 255
+ ++ R F LLS++++ I V FM W+ +L R E +
Sbjct: 165 LRKRLNAR-HFAQLLSKMESSLIPAAV-----FMPWLLRLPLPQSARCREARAELQKILG 218
Query: 256 ELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAA 315
E+I + +K D DL+ LL+ G + ++L + +++ AG TS
Sbjct: 219 EIIVAREKEEASK-DNNTSDLLGGLLKAVYRDGTR--MSLHEVCGMIVAAMFAGQHTSTI 275
Query: 316 TLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV-QELHYLKAVVKETMRLQPPA 374
T W+M +LM HP+ KK +++ + + ++ D+V E+ + + V+E++R PP
Sbjct: 276 TTSWSMLHLM-HPK-NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL 333
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
L+V R + + Y +P ++ + D EA+ NP ++PER D VD
Sbjct: 334 -LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-- 388
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G + V LA ++D+++
Sbjct: 389 ---FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 387
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R CPG + L L +L FD+E
Sbjct: 388 QHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 193/460 (41%), Gaps = 47/460 (10%)
Query: 35 PGPKGLPFIGNLHQF----DSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKET 90
PG G NL+ F + K H+ + +KYGP+ ++G V ++ V +
Sbjct: 11 PGDNGWL---NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALL 67
Query: 91 LKAH--DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRP 148
K+ + + P VA + + ++ W++ R + +NF P
Sbjct: 68 FKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAA-WKKDRVALNQEVMAPEATKNFLP 126
Query: 149 ----IREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGR 204
+ D VS + I ++S+ + +I + FG+R EE ++
Sbjct: 127 LLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPE 186
Query: 205 S-RFHTLLSEIQALSIAFFVTDYSPF-----MGWIDKLTGMMRRLENNVQESDRFYQELI 258
+ RF + ++ S+ F W D + + FY EL
Sbjct: 187 AQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWEL- 245
Query: 259 DEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLV 318
R K + D +L ++ ++ + IKA + + G DT++ TL
Sbjct: 246 -------RQKGSVHH-DYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQ 293
Query: 319 WTMTYLMKHPRVMKKVQEEI---RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
W + + ++ +V ++ E+ R G+ + + +Q + LKA +KET+RL P +
Sbjct: 294 WHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM----LQLVPLLKASIKETLRLHPIS- 348
Query: 376 LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI--DRSVDFKG 433
+ + R ++ Y IPAKTLV V +A+GR+P + +PE F+P R++ D+++ +
Sbjct: 349 VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY-- 406
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
F + FG G R C G + + + L N+L F E+
Sbjct: 407 --FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 444
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 193/460 (41%), Gaps = 47/460 (10%)
Query: 35 PGPKGLPFIGNLHQF----DSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKET 90
PG G NL+ F + K H+ + +KYGP+ ++G V ++ V +
Sbjct: 14 PGDNGWL---NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALL 70
Query: 91 LKAH--DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRP 148
K+ + + P VA + + ++ W++ R + +NF P
Sbjct: 71 FKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAA-WKKDRVALNQEVMAPEATKNFLP 129
Query: 149 ----IREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGR 204
+ D VS + I ++S+ + +I + FG+R EE ++
Sbjct: 130 LLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPE 189
Query: 205 S-RFHTLLSEIQALSIAFFVTDYSPFM-----GWIDKLTGMMRRLENNVQESDRFYQELI 258
+ RF + ++ S+ F W D + + FY EL
Sbjct: 190 AQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWEL- 248
Query: 259 DEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLV 318
R K + D +L ++ ++ + IKA + + G DT++ TL
Sbjct: 249 -------RQKGSVHH-DYRGILYRLLG----DSKMSFEDIKANVTEMLAGGVDTTSMTLQ 296
Query: 319 WTMTYLMKHPRVMKKVQEEI---RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
W + + ++ +V ++ E+ R G+ + + +Q + LKA +KET+RL P +
Sbjct: 297 WHLYEMARNLKVQDMLRAEVLAARHQAQGDMATM----LQLVPLLKASIKETLRLHPIS- 351
Query: 376 LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI--DRSVDFKG 433
+ + R ++ Y IPAKTLV V +A+GR+P + +PE F+P R++ D+++ +
Sbjct: 352 VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY-- 409
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
F + FG G R C G + + + L N+L F E+
Sbjct: 410 --FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 447
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 220 DLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLL 279
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+T+ +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 280 SFTLYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 336
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 337 FS-LYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 392
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 393 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 191/451 (42%), Gaps = 47/451 (10%)
Query: 34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKK--YGPLMSLRIGFVPTLIVSSAKMAKETL 91
P P +PF+G++ QF K + F + K+ + ++ IG IV
Sbjct: 19 PVYPVTVPFLGHIVQF--GKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPH------ 70
Query: 92 KAHDLQFSGRPASVATQRLTYNGLDLIF-------SPYGEYWREIRKICVVHLFNSIRAQ 144
H FS R + + R Y + +F +PY ++ + + Q
Sbjct: 71 -EHSRFFSPR-NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFL--AEELTIAKFQ 126
Query: 145 NFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGR 204
NF P + EV + + +NL E ++ NT C+ FG + + ++ R
Sbjct: 127 NFVPAIQHEVRKFMAE--NWKEDEGVINLLEDCGAMIINTACQCLFG---EDLRKRLNAR 181
Query: 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLT-GMMRRLENNVQESDRFYQELIDEHLD 263
F LLS++++ I V FM W+ +L R E + E+I
Sbjct: 182 -HFAQLLSKMESSLIPAAV-----FMPWLLRLPLPQSARCREARAELQKILGEIIVAREK 235
Query: 264 PKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTY 323
+ +K D DL+ LL+ G + ++L + +++ AG TS T W+M +
Sbjct: 236 EEASK-DNNTSDLLGGLLKAVYRDGTR--MSLHEVCGMIVAAMFAGQHTSTITTSWSMLH 292
Query: 324 LMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV-QELHYLKAVVKETMRLQPPAPLLVPRET 382
LM HP+ KK +++ + + ++ D+V E+ + + V+E++R PP L+V R
Sbjct: 293 LM-HPK-NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRMV 349
Query: 383 TEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFG 442
+ + Y +P ++ + D EA+ NP ++PER D VD FI FG
Sbjct: 350 KAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGFG 402
Query: 443 AGRRICPGMHLGIATVDLALANLLYKFDWEM 473
AG C G + V LA ++D+++
Sbjct: 403 AGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 191/451 (42%), Gaps = 47/451 (10%)
Query: 34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKK--YGPLMSLRIGFVPTLIVSSAKMAKETL 91
P P +PF+G++ QF K + F + K+ + ++ IG IV
Sbjct: 4 PVYPVTVPFLGHIVQF--GKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPH------ 55
Query: 92 KAHDLQFSGRPASVATQRLTYNGLDLIF-------SPYGEYWREIRKICVVHLFNSIRAQ 144
H FS R + + R Y + +F +PY ++ + + Q
Sbjct: 56 -EHSRFFSPR-NEILSPREVYTIMTPVFGEGVAYAAPYPRMREQLNFL--AEELTIAKFQ 111
Query: 145 NFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGR 204
NF P + EV + + +NL E ++ NT C+ FG + + ++ R
Sbjct: 112 NFVPAIQHEVRKFMAE--NWKEDEGVINLLEDCGAMIINTACQCLFG---EDLRKRLNAR 166
Query: 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLT-GMMRRLENNVQESDRFYQELIDEHLD 263
F LLS++++ I V FM W+ +L R E + E+I
Sbjct: 167 -HFAQLLSKMESSLIPAAV-----FMPWLLRLPLPQSARCREARAELQKILGEIIVAREK 220
Query: 264 PKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTY 323
+ +K D DL+ LL+ G + ++L + +++ AG TS T W+M +
Sbjct: 221 EEASK-DNNTSDLLGGLLKAVYRDGTR--MSLHEVCGMIVAAMFAGQHTSTITTSWSMLH 277
Query: 324 LMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV-QELHYLKAVVKETMRLQPPAPLLVPRET 382
LM HP+ KK +++ + + ++ D+V E+ + + V+E++R PP L+V R
Sbjct: 278 LM-HPK-NKKWLDKLHKEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPL-LMVMRMV 334
Query: 383 TEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFG 442
+ + Y +P ++ + D EA+ NP ++PER D VD FI FG
Sbjct: 335 KAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DEKVDGA-----FIGFG 387
Query: 443 AGRRICPGMHLGIATVDLALANLLYKFDWEM 473
AG C G + V LA ++D+++
Sbjct: 388 AGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 16/230 (6%)
Query: 248 QESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLD--HIKAVLMNI 305
QE + +L+D+ + + KA +Q D D+L Q+ + + LD +I ++
Sbjct: 206 QEDIKVMNDLVDKIIADR--KASGEQSD--DLLTQMLNGKDPETGEPLDDGNISYQIITF 261
Query: 306 FVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVV 364
+AG +T++ L + + +L+K+P V++KV EE R LV S+ V++L Y+ V+
Sbjct: 262 LIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSY---KQVKQLKYVGMVL 318
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPE 422
E +RL P AP E +++ G Y + V V + RD W ++ EEF PE
Sbjct: 319 NEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
RF + S F PFG G+R C G + L L +L FD+E
Sbjct: 378 RFENPSA---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 265 KRTKADMQQ----EDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWT 320
K KA QQ ED + +LL R L+L +K ++ + AG +T + L
Sbjct: 209 KIIKARQQQPPSEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSF 266
Query: 321 MTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPR 380
L +H + ++V++E L + + + ++++ YL V++E +RL PP R
Sbjct: 267 CLLLGQHSDIRERVRQEQNKLQLSQE--LTAETLKKMPYLDQVLQEVLRLIPPVGGGF-R 323
Query: 381 ETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIP 440
E + G+ P LV DP+ + +PE+F+PERF F +P
Sbjct: 324 ELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVP 383
Query: 441 FGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPG 476
FG G R C G + L L+ +FDW + PG
Sbjct: 384 FGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG 419
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 185/459 (40%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL ++ + + W++ I + F+ + + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLATSWT-HEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 123
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 124 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 164 -----SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVM 212
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ +AG +T++
Sbjct: 213 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 317 LVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAP 329
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---I 385
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 181/463 (39%), Gaps = 69/463 (14%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE A
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEA--AD 64
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVH--LFNSIRAQNFRPIRED 152
+ +F + + G L S W + C H L S Q +
Sbjct: 65 ESRFDKNLSQALKFVRDFAGDGLFTS-----WTHEKNWCKAHNILLPSFSQQAMKGYHAM 119
Query: 153 EVSRMIESIXX--XXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTL 210
V ++ + + + E L+ +TI F R +
Sbjct: 120 MVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSGFNYRFN--------------- 164
Query: 211 LSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKAD 270
+F+ PF +T M+R L+ + + R + + ++ + D
Sbjct: 165 ---------SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQED 209
Query: 271 MQ-QEDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDT 312
++ DLVD ++ RK G + D L H I+ ++ +AG +T
Sbjct: 210 IKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHET 269
Query: 313 SAATLVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
++ L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL
Sbjct: 270 TSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLW 326
Query: 372 PPAPLLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSV 429
P AP E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 327 PTAPAFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA 385
Query: 430 DFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 386 ---IPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 277 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 333
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 334 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 389
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 390 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 387
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 388 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL L + + W++ I + F+ + + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGL-LTSWTHEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 123
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 124 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 164 -----SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVM 212
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ +AG ++++
Sbjct: 213 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGL 272
Query: 317 LVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAP 329
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---I 385
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 65
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL L + + W++ I + F+ + + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGL-LTSWTHEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 123
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 124 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 164 -----SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVM 212
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ +AG ++++
Sbjct: 213 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGL 272
Query: 317 LVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAP 329
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---I 385
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 184/459 (40%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDES 66
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL L + + W++ I + F+ + + + D
Sbjct: 67 RFDKNLSQALKFVRDFAGDGL-LTSWTHEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 124
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 125 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 165 -----SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVM 213
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ +AG ++++
Sbjct: 214 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGL 273
Query: 317 LVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAP 330
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 AFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---I 386
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPP 331
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 387
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 388 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P +P
Sbjct: 277 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTSPA 333
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 334 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 389
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 390 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F P+G G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 184/459 (40%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL ++ + + W++ I + F+ + + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLATSWT-HEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 123
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 124 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 164 -----SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVM 212
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ +AG + ++
Sbjct: 213 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGL 272
Query: 317 LVWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAP 329
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---I 385
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ + G +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P P
Sbjct: 277 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTVPA 333
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 334 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 389
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 390 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG + ++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG + ++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG + ++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ + G +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ + G +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ + G +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 185/459 (40%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 6 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 65
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + +GL ++ + + W++ I + F+ + + + D
Sbjct: 66 RFDKNLSQALKFVRDFAGDGLFTSWT-HEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 123
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 124 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 163
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 164 -----SFYRDQPHPF------ITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVM 212
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ +AG +T++
Sbjct: 213 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGL 272
Query: 317 LVWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 273 LSFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAP 329
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---I 385
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F P+G G+R C G + L L +L FD+E
Sbjct: 386 PQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ + G +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 144/342 (42%), Gaps = 46/342 (13%)
Query: 144 QNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNEE 199
QNF P + EV + + + ++NL E ++ NT C+ FG KR D
Sbjct: 126 QNFVPAIQHEVRKFMAA--NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR-- 181
Query: 200 AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
RF LL+++++ I P ++ L + E+ Q+++
Sbjct: 182 ------RFAQLLAKMESSLI--------PAAVFLPILLKLPLPQSARCHEARTELQKILS 227
Query: 260 EHLDPKRTKA---DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
E + ++ A D DL+ LL G ++L + +++ AG TS+ T
Sbjct: 228 EIIIARKAAAVNKDSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 285
Query: 317 LVWTMTYLM-----KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
W+M +LM KH ++K EE + + N + + E+ + + +E++R
Sbjct: 286 TTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN------NVMDEMPFAERCARESIRRD 339
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
PP L++ R+ + Y +P ++ + D EA+ P ++PER D V+
Sbjct: 340 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEG 396
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G G+ V LA +D+++
Sbjct: 397 A-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ + G +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F P G G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ +AG +T++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEE-IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 F-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F P G G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 46/342 (13%)
Query: 144 QNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNEE 199
QNF P + EV + + + ++NL E ++ NT C+ FG KR D
Sbjct: 113 QNFVPAIQHEVRKFMAA--NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR-- 168
Query: 200 AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
RF LL+++++ I P ++ L + E+ Q+++
Sbjct: 169 ------RFAQLLAKMESSLI--------PAAVFLPILLKLPLPQSARCHEARTELQKILS 214
Query: 260 EHLDPKR---TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
E + ++ D DL+ LL G ++L + +++ AG TS+ T
Sbjct: 215 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 272
Query: 317 LVWTMTYLM-----KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
W+M +LM KH ++K EE + + N + + E+ + + +E++R
Sbjct: 273 TTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN------NVMDEMPFAERCARESIRRD 326
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
PP L++ R+ + Y +P ++ + D EA+ P ++PER D V+
Sbjct: 327 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEG 383
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G G+ V LA +D+++
Sbjct: 384 A-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 46/342 (13%)
Query: 144 QNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNEE 199
QNF P + EV + + + ++NL E ++ NT C+ FG KR D
Sbjct: 114 QNFVPAIQHEVRKFMAA--NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR-- 169
Query: 200 AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
RF LL+++++ I P ++ L + E+ Q+++
Sbjct: 170 ------RFAQLLAKMESSLI--------PAAVFLPILLKLPLPQSARCHEARTELQKILS 215
Query: 260 EHLDPKR---TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
E + ++ D DL+ LL G ++L + +++ AG TS+ T
Sbjct: 216 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 273
Query: 317 LVWTMTYLM-----KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
W+M +LM KH ++K EE + + N + + E+ + + +E++R
Sbjct: 274 TTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN------NVMDEMPFAERCARESIRRD 327
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
PP L++ R+ + Y +P ++ + D EA+ P ++PER D V+
Sbjct: 328 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEG 384
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G G+ V LA +D+++
Sbjct: 385 A-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 46/342 (13%)
Query: 144 QNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNEE 199
QNF P + EV + + + ++NL E ++ NT C+ FG KR D
Sbjct: 112 QNFVPAIQHEVRKFMAA--NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR-- 167
Query: 200 AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
RF LL+++++ I P ++ L + E+ Q+++
Sbjct: 168 ------RFAQLLAKMESSLI--------PAAVFLPILLKLPLPQSARCHEARTELQKILS 213
Query: 260 EHLDPKR---TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
E + ++ D DL+ LL G ++L + +++ AG TS+ T
Sbjct: 214 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 271
Query: 317 LVWTMTYLM-----KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
W+M +LM KH ++K EE + + N + + E+ + + +E++R
Sbjct: 272 TTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN------NVMDEMPFAERCARESIRRD 325
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
PP L++ R+ + Y +P ++ + D EA+ P ++PER D V+
Sbjct: 326 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEG 382
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G G+ V LA +D+++
Sbjct: 383 A-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 46/342 (13%)
Query: 144 QNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNEE 199
QNF P + EV + + + ++NL E ++ NT C+ FG KR D
Sbjct: 113 QNFVPAIQHEVRKFMAA--NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR-- 168
Query: 200 AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
RF LL+++++ I P ++ L + E+ Q+++
Sbjct: 169 ------RFAQLLAKMESSLI--------PAAVFLPILLKLPLPQSARCHEARTELQKILS 214
Query: 260 EHLDPKR---TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
E + ++ D DL+ LL G ++L + +++ AG TS+ T
Sbjct: 215 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 272
Query: 317 LVWTMTYLM-----KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
W+M +LM KH ++K EE + + N + + E+ + + +E++R
Sbjct: 273 TTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN------NVMDEMPFAERCARESIRRD 326
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
PP L++ R+ + Y +P ++ + D EA+ P ++PER D V+
Sbjct: 327 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEG 383
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G G+ V LA +D+++
Sbjct: 384 A-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ AG + ++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P P
Sbjct: 274 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTGPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ AG + ++ L
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 274
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P V++K EE R LV S+ V++L Y+ V+ E +RL P P
Sbjct: 275 SFALYFLVKNPHVLQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTGPA 331
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 387
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 388 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 46/342 (13%)
Query: 144 QNFRPIREDEVSRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFG----KRSDGNEE 199
QNF P + EV + + + ++NL E ++ NT C+ FG KR D
Sbjct: 126 QNFVPAIQHEVRKFMAA--NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDAR-- 181
Query: 200 AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259
RF LL+++++ I P ++ L + E+ Q+++
Sbjct: 182 ------RFAQLLAKMESSLI--------PAAVFLPILLKLPLPQSARCHEARTELQKILS 227
Query: 260 EHLDPKR---TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAAT 316
E + ++ D DL+ LL G ++L + +++ AG TS+ T
Sbjct: 228 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSIT 285
Query: 317 LVWTMTYLM-----KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371
W+M +LM KH ++K EE + + N + + E+ + + +E++R
Sbjct: 286 TTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYN------NVMDEMPFAERCARESIRRD 339
Query: 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDF 431
PP L++ R+ + Y +P ++ + D EA+ P ++PER D V+
Sbjct: 340 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER--DEKVEG 396
Query: 432 KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEM 473
FI FGAG C G G+ V LA +D+++
Sbjct: 397 A-----FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 99/459 (21%), Positives = 182/459 (39%), Gaps = 61/459 (13%)
Query: 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH 94
P PK + NL ++ KP + +++ + G + T +SS ++ KE
Sbjct: 7 PQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES 66
Query: 95 DLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEV 154
+ A + L +GL ++ + + W++ I + F+ + + + D
Sbjct: 67 RFDKNLSQAPKFVRDLAGDGLFTSWT-HEKNWKKAHNILLPS-FSQQAMKGYHAMMVDIA 124
Query: 155 SRMIESIXXXXXXXXQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEI 214
++++ + + E L+ +TI F R +
Sbjct: 125 VQLVQK-WERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFN------------------- 164
Query: 215 QALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ-Q 273
+F+ PF +T M+R L+ + + R + + ++ + D++
Sbjct: 165 -----SFYRDQPHPF------ITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVM 213
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAAT 316
DLVD ++ RK G + D L H I+ ++ AG + ++
Sbjct: 214 NDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGL 273
Query: 317 LVWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP 375
L + + +L+K+P ++K EE R LV S V++L Y+ V+ E +RL P AP
Sbjct: 274 LSFALYFLVKNPHELQKAAEEAARVLVDPVPS---HKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 376 LLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKG 433
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 AFS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA---I 386
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 27/218 (12%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDH-----------------IKAVLMNIFVAGTDTSAATL 317
DLVD ++ RK G + D L H I+ ++ AG + ++ L
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 273
Query: 318 VWTMTYLMKHPRVMKKVQEEI-RSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPL 376
+ + +L+K+P ++K EE R LV S+ V++L Y+ V+ E +RL P AP
Sbjct: 274 SFALYFLVKNPHELQKAAEEAARVLVDPVPSY---KQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 377 LVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGK 434
E +++ G Y + + V + RD W ++ EEF PERF + S
Sbjct: 331 FS-LYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA---IP 386
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWE 472
F PFG G+R C G + L L +L FD+E
Sbjct: 387 QHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 26/193 (13%)
Query: 275 DLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKV 334
DL+ +L ++ G L+ I A+++N+ +A T+ + TL + +L+ +P M V
Sbjct: 239 DLISILC-TSEYEGMA--LSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV 295
Query: 335 QEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIP 394
+ RSLV + ET+R +PP L +PR+ ++ +++ G EI
Sbjct: 296 LAD-RSLV------------------PRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIK 335
Query: 395 AKTLVYVNAWAIGRDPEAWENPEEFNPERF-IDRSVDFKGKNFEFIPFGAGRRICPGMHL 453
T+V+ A RDPEA+E P+ FN R + F G + FG+G C G
Sbjct: 336 KDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAA-RHLAFGSGIHNCVGTAF 394
Query: 454 GIATVDLALANLL 466
+++ +AN++
Sbjct: 395 AKNEIEI-VANIV 406
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 295 LDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEI-RSL--------VGGN 345
L+ K L+ ++ + +T AT W++ ++++P MK EE+ R+L + GN
Sbjct: 256 LEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGN 314
Query: 346 KSFVDEDDVQELHYLKAVVKETMRLQPPA-PLLVPRETTEKSIIDG-YEIPAKTLVYVNA 403
+ + ++ +L L +++KE++RL + + +E + DG Y I ++ +
Sbjct: 315 PICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 404 WAIGRDPEAWENPEEFNPERFIDRSVDFKGK--------NFEFIPFGAGRRICPGMHLGI 455
+ DPE + +P F +R++D + K + ++PFG+G ICPG I
Sbjct: 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAI 434
Query: 456 ATVDLALANLLYKFDWEMPPGMKK 479
+ L +L F+ E+ G K
Sbjct: 435 HEIKQFLILMLSYFELELIEGQAK 458
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 295 LDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEI-RSL--------VGGN 345
L+ K L+ ++ + +T AT W++ ++++P MK EE+ R+L + GN
Sbjct: 256 LEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGN 314
Query: 346 KSFVDEDDVQELHYLKAVVKETMRLQPPA-PLLVPRETTEKSIIDG-YEIPAKTLVYVNA 403
+ + ++ +L L +++KE++RL + + +E + DG Y I ++ +
Sbjct: 315 PICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYP 374
Query: 404 WAIGRDPEAWENPEEFNPERFIDRSVDFKGK--------NFEFIPFGAGRRICPGMHLGI 455
+ DPE + +P F +R++D + K + ++PFG+G ICPG I
Sbjct: 375 QLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAI 434
Query: 456 ATVDLALANLLYKFDWEMPPGMKK 479
+ L +L F+ E+ G K
Sbjct: 435 HEIKQFLILMLSYFELELIEGQAK 458
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 299 KAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELH 358
+A+L+ ++V + A W M YL+ HP ++ V+EEI+ G K E+ +
Sbjct: 256 RAMLLQLWVTQGNAGPAAF-WVMGYLLTHPEALRAVREEIQ----GGKHLRLEERQKNTP 310
Query: 359 YLKAVVKETMRLQPPAPLLVPRETTEKSII---DGYEIPAK---TLVYVNAWAIGRDPEA 412
+V+ ET+RL A L+ R+ T+ I +G E + L + DP+
Sbjct: 311 VFDSVLWETLRLTAAA--LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQI 368
Query: 413 WENPEEFNPERFI--DRS--VDF--KGKNFEF--IPFGAGRRICPGMHLGIATVDLALAN 464
+ PE F +RF+ DR+ DF G ++ +P+G +CPG H + + +
Sbjct: 369 HQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFT 428
Query: 465 LLYKFDWEM 473
+L +FD E+
Sbjct: 429 ILTRFDVEL 437
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI----CPGMHLGIATVDLALANLLYKF 469
+P+EF PERF D +F FIP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 470 DWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
+++P QDL D + K F++
Sbjct: 383 RYDVP----DQDLSIDFARLPALPKSGFVM 408
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI----CPGMHLGIATVDLALANLLYKF 469
+P+EF PERF D +F FIP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 470 DWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
+++P QDL D + K F++
Sbjct: 375 RYDVP----DQDLSIDFARLPALPKSGFVM 400
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI----CPGMHLGIATVDLALANLLYKF 469
+P+EF PERF D +F FIP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 470 DWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
+++P QDL D + K F++
Sbjct: 375 RYDVP----DQDLSIDFARLPALPKSGFVM 400
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI----CPGMHLGIATVDLALANLLYKF 469
+P+EF PERF D +F FIP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 470 DWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
+++P QDL D + K F++
Sbjct: 383 RYDVP----DQDLSIDFARLPALPKSGFVM 408
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW 318
Query: 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI----CPGMHLGIATVDLALANLLYKF 469
+P+EF PERF D +F FIP G G CPG + +A + +A L+
Sbjct: 319 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 374
Query: 470 DWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
+++P QDL D + K F++
Sbjct: 375 RYDVP----DQDLSIDFARLPALPKSGFVM 400
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 13/150 (8%)
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
VQ+ Y + V+E R P P +V R + + +G P V ++ + D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEW-EGMAFPEGRQVVLDLYGSNHDAATW 326
Query: 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI----CPGMHLGIATVDLALANLLYKF 469
+P+EF PERF D +F FIP G G CPG + +A + +A L+
Sbjct: 327 ADPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAM 382
Query: 470 DWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499
+++P QDL D + K F++
Sbjct: 383 RYDVP----DQDLSIDFARLPALPKSGFVM 408
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E R P P L + + + E T V ++ + DP W++P+EF PER
Sbjct: 280 VQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 424 FIDRSVDFKGKNFEFIPFGAGR----RICPGMHLGIATVDLALANLLYKFDWEMP 474
F +R + F+ IP G G CPG + I + +L L+++ ++++P
Sbjct: 339 FAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 360 LKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIG--RDPEAWENPE 417
+ A+V+E +R +PP P + R TT+ + + G IPA V VN W + RD +A ++P+
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 330
Query: 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
F+P R K + FG G C G L +AL ++ +F
Sbjct: 331 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 13/112 (11%)
Query: 360 LKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIG--RDPEAWENPE 417
+ A+V+E +R +PP P + R TT+ + + G IPA V VN W + RD +A ++P+
Sbjct: 294 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPAD--VMVNTWVLSANRDSDAHDDPD 350
Query: 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
F+P R K + FG G C G L +AL ++ +F
Sbjct: 351 RFDPSR--------KSGGAAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 273 QEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMK 332
Q+D++ +LL+ R+ K LT + + + + +AG +T+ + ++ L++HP +
Sbjct: 203 QQDMISMLLKGRE----KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLL 258
Query: 333 KVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYE 392
K++E L+G V+E +R + P + R +E I G
Sbjct: 259 KLREN-PDLIG------------------TAVEECLRYESPTQM-TARVASEDIDICGVT 298
Query: 393 IPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMH 452
I VY+ A RDP + NP+ F+ I RS + + FG G +C G
Sbjct: 299 IRQGEQVYLLLGAANRDPSIFTNPDVFD----ITRSPN------PHLSFGHGHHVCLGSS 348
Query: 453 LGIATVDLALANLLYK--------FDWEMPP 475
L +A+ LL + F+W P
Sbjct: 349 LARLEAQIAINTLLQRMPSLNLADFEWRYRP 379
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 33/187 (17%)
Query: 292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDE 351
DLT+D + N+ + G +T+ + + L P ++ +++ + VD
Sbjct: 238 DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRD--------GSADVD- 288
Query: 352 DDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPE 411
VV+E +R PA + V R TT I+G ++P+ T V A RDP
Sbjct: 289 ----------TVVEEVLRWTSPA-MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPA 337
Query: 412 AWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLG---IATVDLALANLLYK 468
+++P+ F P R +R I FG G C G L ++ V LA + +
Sbjct: 338 EFDDPDTFLPGRKPNR----------HITFGHGMHHCLGSALARIELSVVLRVLAERVSR 387
Query: 469 FDWEMPP 475
D E P
Sbjct: 388 VDLEREP 394
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
+ + VAG +T A+ L W+ L P K+V E A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESE-------------------EAALA 256
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYE-IPAKTLVYVNAWAIGRDPEAWENPEEFNP 421
+E +RL PPA +L R E+ ++ G + +P T + ++ + R + + E F P
Sbjct: 257 AFQEALRLYPPAWILTRR--LERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRP 312
Query: 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
ERF++ G+ F PFG G+R+C G + + L +F
Sbjct: 313 ERFLEERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 329 RVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTE---K 385
+V ++ EEIRS++ N + ++++ K+VV E +R +PP R + +
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 386 SIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI 425
S +++ A ++Y RDP+ ++ +EF PERF+
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 329 RVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTE---K 385
+V ++ EEIRS++ N + ++++ K+VV E +R +PP R + +
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 386 SIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI 425
S +++ A ++Y RDP+ ++ +EF PERF+
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV 415
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 298 IKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQEL 357
++ ++ + VAG +T+ L M +HP K++E N +
Sbjct: 243 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKE--------NPELAPQ------ 288
Query: 358 HYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPE 417
V+E +R P P+ R E ++G IP T V++ A RDP + + +
Sbjct: 289 -----AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGM 477
F D +V + + I FG G C G L + A+A L + D PP +
Sbjct: 344 RF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLD---PPQI 391
Query: 478 KKQ 480
+
Sbjct: 392 AGE 394
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 298 IKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQEL 357
++ ++ + VAG +T+ L M +HP K++E N +
Sbjct: 233 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKE--------NPELAPQ------ 278
Query: 358 HYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPE 417
V+E +R P P+ R E ++G IP T V++ A RDP + + +
Sbjct: 279 -----AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 333
Query: 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGM 477
F D +V + + I FG G C G L + A+A L + D PP +
Sbjct: 334 RF------DITVKREAPS---IAFGGGPHFCLGTALARLELTEAVAALATRLD---PPQI 381
Query: 478 KKQ 480
+
Sbjct: 382 AGE 384
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 158/417 (37%), Gaps = 76/417 (18%)
Query: 63 KKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGR---PA---SVATQRLT-YNGL 115
++ GP + + V VS + K+ L + D+ R PA V T L + +
Sbjct: 25 REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAV 84
Query: 116 DLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESIXXXXXXXXQVNLSE 175
+ +F+ YG R++R++ V F++ R RP E V+ +++ + E
Sbjct: 85 ENMFTAYGPNHRKLRRL-VAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQE 143
Query: 176 KTMSLSCNTICRL--AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWI 233
L I L R DG + G F T L + +A +
Sbjct: 144 LAYPLPIAVIGHLMGVPQDRRDGFRALVDGV--FDTTLDQAEAQA--------------- 186
Query: 234 DKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDL 293
+ R Y E++D+ + KR +D+ +L+ R G L
Sbjct: 187 ---------------NTARLY-EVLDQLIAAKRAT---PGDDMTSLLIAARDDEGDGDRL 227
Query: 294 TLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDD 353
+ + ++ L+ + AG +T+ + + L+ P + V++ G ++ D
Sbjct: 228 SPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRK-------GEVTWAD--- 277
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPR-ETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEA 412
VV+ET+R +P L R T+ ++ DG I + + A R P+
Sbjct: 278 ---------VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDW 328
Query: 413 WENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
E+ + F+ R + E + FG G C G L V LAL +L +F
Sbjct: 329 HEDADTFDATRTVK----------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
+ + VAG +T A+ L W+ L P K+V E A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESE-------------------EAALA 256
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYE-IPAKTLVYVNAWAIGR--DPEAWENPEEF 419
+E +RL PPA +L R E+ ++ G + +P T + ++ + R PE E F
Sbjct: 257 AFQEALRLYPPAWILTRR--LERPLLLGEDRLPQGTTLVLSPYVTQRLYFPEG----EAF 310
Query: 420 NPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
PERF+ G+ F PFG G+R+C G + + L +F
Sbjct: 311 QPERFLAERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 38/206 (18%)
Query: 273 QEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMK 332
++ L+D L+ + G DL D + + + + VAG +T+ + L++HP
Sbjct: 211 EDGLLDELIARQLEEG---DLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHP---- 263
Query: 333 KVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYE 392
E+I L+ ++ + VV+E +R + +V R E + G
Sbjct: 264 ---EQIDVLL------------RDPGAVSGVVEELLRFTSVSDHIV-RMAKEDIEVGGAT 307
Query: 393 IPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMH 452
I A V V+ + RD +A+ENP+ F+ R V FG G C G +
Sbjct: 308 IKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVG----------FGHGIHQCLGQN 357
Query: 453 LGIATVDLALANLLYKFDWEMPPGMK 478
L A +++AL L + PG++
Sbjct: 358 LARAELEIALGGLFARI-----PGLR 378
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 255 QELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSA 314
+E+++ LD + +DL+ L++++ + L+ D + ++ + + +AG +TS
Sbjct: 190 REVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFETSV 247
Query: 315 ATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPA 374
+ + L+ HP + V+ + + L V+E +R P
Sbjct: 248 SLIGIGTYLLLTHPDQLALVRRDPSA-------------------LPNAVEEILRYIAP- 287
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
P R E+ I G IP + V V A RDP+ + +P F+ R D +G
Sbjct: 288 PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH 341
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L ++AL L +F
Sbjct: 342 ----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 40/217 (18%)
Query: 253 FYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDT 312
+ + LIDE +RT EDL+ L+ + + LT D I A + +AG +T
Sbjct: 211 YLRALIDER---RRTPG----EDLMSGLVAVEESGD---QLTEDEIIATCNLLLIAGHET 260
Query: 313 SAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQP 372
+ + +++ P + + G+++ AV++ETMR P
Sbjct: 261 TVNLIANAALAMLRTPGQWAALAAD------GSRA-------------SAVIEETMRYDP 301
Query: 373 PAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFK 432
P LV R + I + +P + + A RDP P+ F+P+R
Sbjct: 302 PV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR--------- 351
Query: 433 GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L +AL L +F
Sbjct: 352 -AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 30/196 (15%)
Query: 274 EDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKK 333
+DL L+Q ++ LT I + L + AG +T+ + +V + L HP
Sbjct: 211 DDLTSALIQASENGDH---LTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP----- 262
Query: 334 VQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEI 393
E R+LV ++ AVV+ET+R P ++ R E + I
Sbjct: 263 ---EQRALVLSGEA-----------EWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVI 308
Query: 394 PAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHL 453
PA + V+ A+GRD A P DR + I FG G +CPG L
Sbjct: 309 PAGDALIVSYGALGRDERA-HGPTA-------DRFDLTRTSGNRHISFGHGPHVCPGAAL 360
Query: 454 GIATVDLALANLLYKF 469
+AL L +F
Sbjct: 361 SRMEAGVALPALYARF 376
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 255 QELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSA 314
+E+++ LD + +DL+ L++++ + L+ D + ++ + + +AG ++S
Sbjct: 190 REVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFESSV 247
Query: 315 ATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPA 374
+ + L+ HP + V+ + + L V+E +R P
Sbjct: 248 SLIGIGTYLLLTHPDQLALVRRDPSA-------------------LPNAVEEILRYIAP- 287
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
P R E+ I G IP + V V A RDP+ + +P F+ R D +G
Sbjct: 288 PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH 341
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L ++AL L +F
Sbjct: 342 ----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 32/215 (14%)
Query: 255 QELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSA 314
+E+++ LD + +DL+ L++++ + L+ D + ++ + + +AG ++S
Sbjct: 189 REVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFESSV 246
Query: 315 ATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPA 374
+ + L+ HP + V+ + + L V+E +R P
Sbjct: 247 SLIGIGTYLLLTHPDQLALVRRDPSA-------------------LPNAVEEILRYIAP- 286
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
P R E+ I G IP + V V A RDP+ + +P F+ R D +G
Sbjct: 287 PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH 340
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L ++AL L +F
Sbjct: 341 ----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 352 DDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPE 411
D V+E LKAV +E +R PP + R T EK I I LV V + RD E
Sbjct: 233 DYVREKGALKAV-EEALRFSPPV-MRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEE 290
Query: 412 AWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDW 471
+++P+ F P+R + + FG+G +C G L +AL KF
Sbjct: 291 VFKDPDSFIPDRTPN----------PHLSFGSGIHLCLGAPLARLEARIALEEFAKKF-- 338
Query: 472 EMPPGMKKQDLDFDSLSG 489
+ +KK+ +D + L+G
Sbjct: 339 RVKEIVKKEKIDNEVLNG 356
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 32/215 (14%)
Query: 255 QELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSA 314
+E+++ LD + +DL+ L++++ + L+ D + ++ + + +AG + S
Sbjct: 190 REVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFEASV 247
Query: 315 ATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPA 374
+ + L+ HP + V+ + + L V+E +R P
Sbjct: 248 SLIGIGTYLLLTHPDQLALVRRDPSA-------------------LPNAVEEILRYIAP- 287
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
P R E+ I G IP + V V A RDP+ + +P F+ R D +G
Sbjct: 288 PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH 341
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L ++AL L +F
Sbjct: 342 ----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 32/215 (14%)
Query: 255 QELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSA 314
+E+++ LD + +DL+ L++++ + L+ D + ++ + + +AG + S
Sbjct: 189 REVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGR--LSADELTSIALVLLLAGFEASV 246
Query: 315 ATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPA 374
+ + L+ HP + V+ + + L V+E +R P
Sbjct: 247 SLIGIGTYLLLTHPDQLALVRRDPSA-------------------LPNAVEEILRYIAP- 286
Query: 375 PLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434
P R E+ I G IP + V V A RDP+ + +P F+ R D +G
Sbjct: 287 PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR------DTRGH 340
Query: 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L ++AL L +F
Sbjct: 341 ----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 300 AVLMNIFVAGTDTSAATLVWT-MTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELH 358
AV N F TL W + H ++ ++++ I+S GN V + ++++
Sbjct: 272 AVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGN---VTLEAIEQMP 328
Query: 359 YLKAVVKETMRLQPPAPLLVPRETTEKSIID---GYEIPAKTLVYVNAWAIGRDPEAWEN 415
K+VV E++R++PP P + + +I +E+ +++ +DP+ ++
Sbjct: 329 LTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDR 388
Query: 416 PEEFNPERFI 425
PEE+ P+RF+
Sbjct: 389 PEEYVPDRFV 398
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 34/216 (15%)
Query: 255 QELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSA 314
+E+++ LD + +DL+ L+ ++ + L+ D + ++ + + +AG + S
Sbjct: 189 REVVNFILDLVERRRTEPGDDLLSALISVQDDDDGR--LSADELTSIALVLLLAGFEASV 246
Query: 315 ATLVWTMTYLM-KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPP 373
+L+ TYL+ HP + V+ + + L V+E +R P
Sbjct: 247 -SLIGIGTYLLLTHPDQLALVRADPSA-------------------LPNAVEEILRYIAP 286
Query: 374 APLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKG 433
P R E+ I G IP + V V A RDP + +P F+ R D +G
Sbjct: 287 -PETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR------DTRG 339
Query: 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ FG G C G L ++AL L +F
Sbjct: 340 H----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 81/225 (36%), Gaps = 38/225 (16%)
Query: 244 ENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLM 303
+ + E + LID +K EDL+ L++ G + LT + + +
Sbjct: 208 QTAMAEMSGYLSRLID-------SKRGQDGEDLLSALVRTSDEDGSR--LTSEELLGMAH 258
Query: 304 NIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363
+ VAG +T+ + M L+ HP + ++ ++ L
Sbjct: 259 ILLVAGHETTVNLIANGMYALLSHPDQLAALR-------------------ADMTLLDGA 299
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E +R + P R E +DG IPA V V R PE + +P F
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF---- 355
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYK 468
D + + FG G C G L +A+ LL +
Sbjct: 356 ------DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 81/225 (36%), Gaps = 38/225 (16%)
Query: 244 ENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLM 303
+ + E + LID +K EDL+ L++ G + LT + + +
Sbjct: 208 QTAMAEMSGYLSRLID-------SKRGQDGEDLLSALVRTSDEDGSR--LTSEELLGMAH 258
Query: 304 NIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363
+ VAG +T+ + M L+ HP + ++ ++ L
Sbjct: 259 ILLVAGHETTVNLIANGMYALLSHPDQLAALR-------------------ADMTLLDGA 299
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E +R + P R E +DG IPA V V R PE + +P F
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF---- 355
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYK 468
D + + FG G C G L +A+ LL +
Sbjct: 356 ------DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 81/225 (36%), Gaps = 38/225 (16%)
Query: 244 ENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLM 303
+ + E + LID +K EDL+ L++ G + LT + + +
Sbjct: 208 QTAMAEMSGYLSRLID-------SKRGQDGEDLLSALVRTSDEDGSR--LTSEELLGMAH 258
Query: 304 NIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363
+ VAG +T+ + M L+ HP + ++ ++ L
Sbjct: 259 ILLVAGHETTVNLIANGMYALLSHPDQLAALR-------------------ADMTLLDGA 299
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E +R + P R E +DG IPA V V R PE + +P F
Sbjct: 300 VEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRF---- 355
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYK 468
D + + FG G C G L +A+ LL +
Sbjct: 356 ------DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 34/193 (17%)
Query: 262 LDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTM 321
L+ KRT+ D + L+ LL + G + L+ + + A+ M + +AG +T+ + +
Sbjct: 195 LERKRTEPD---DALLSSLLAVSDEDGDR--LSQEELVAMAMLLLIAGHETTVNLIGNGV 249
Query: 322 TYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRE 381
L+ HP + R L+ + S + + V+E +R P R
Sbjct: 250 LALLTHP--------DQRKLLAEDPSLI-----------SSAVEEFLRFDSPVSQAPIRF 290
Query: 382 TTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPF 441
T E G IPA +V + A RD + P+ + R D G F F
Sbjct: 291 TAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR------DASGGVF----F 340
Query: 442 GAGRRICPGMHLG 454
G G C G L
Sbjct: 341 GHGIHFCLGAQLA 353
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 34/193 (17%)
Query: 262 LDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTM 321
L+ KRT+ D + L+ LL + G + L+ + + A+ M + +AG +T+ + +
Sbjct: 195 LERKRTEPD---DALLSSLLAVSDMDGDR--LSQEELVAMAMLLLIAGHETTVNLIGNGV 249
Query: 322 TYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRE 381
L+ HP + R L+ + S + + V+E +R P R
Sbjct: 250 LALLTHP--------DQRKLLAEDPSLI-----------SSAVEEFLRFDSPVSQAPIRF 290
Query: 382 TTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPF 441
T E G IPA +V + A RD + P+ + R D G F F
Sbjct: 291 TAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR------DASGGVF----F 340
Query: 442 GAGRRICPGMHLG 454
G G C G L
Sbjct: 341 GHGIHFCLGAQLA 353
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 358 HYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPE 417
+ L +V+E +R P + T+ + G +I A + +N A DP + P
Sbjct: 320 NLLPGIVEEAIRWTTPVQHFMRTAATDTELC-GQKIAAGDWLMLNYVAANHDPAQFPEPR 378
Query: 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD 470
+F+P R +R + FGAG C G+HL + + L LL + D
Sbjct: 379 KFDPTRPANR----------HLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDE 351
++T + + + L AG +T+ + + + L+ P + ++++ D
Sbjct: 233 NVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRK-------------DP 279
Query: 352 DDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPE 411
D + A V E +R+ A + R E + G +PA V DPE
Sbjct: 280 D------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPE 333
Query: 412 AWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYK 468
+++PE VDF + + FG G C G HL +++AL LL +
Sbjct: 334 QFDDPER----------VDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 30/174 (17%)
Query: 293 LTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDED 352
L++D I +++ AG +T+ L + L H + V +E+R+
Sbjct: 239 LSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAH----RDVLDELRTTPESTP------ 288
Query: 353 DVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEA 412
A V+E MR PP V R E + ++IP + V + RDP
Sbjct: 289 ---------AAVEELMRYDPPV-QAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPAR 338
Query: 413 WENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLL 466
+ +P+ + R +R V FG G C G L A ++ L LL
Sbjct: 339 FPDPDVLDVHRAAERQVG----------FGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 276
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 277 EELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 335
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 336 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 237 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 277
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 278 EELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 336
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 337 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 275
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 276 EELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 334
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 276
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 277 EELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 335
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 336 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 275
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 276 EELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 334
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 299 KAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDD----- 353
+A+++ ++ + A W + +L+K+P + V+ E+ S++ + V +
Sbjct: 253 RALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 311
Query: 354 -VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSI--IDGYEIPAKT---LVYVNAWAIG 407
+ L +V+ E++RL AP + + ++ DG E + L+ +
Sbjct: 312 VLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQ 370
Query: 408 RDPEAWENPEEFNPERFID----RSVDF-----KGKNFEFIPFGAGRRICPGMHLGIATV 458
RDPE + +PE F RF++ DF + KN+ +P+GAG C G + ++
Sbjct: 371 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYN-MPWGAGHNHCLGRSYAVNSI 429
Query: 459 DLALANLLYKFDWEM 473
+ +L D E+
Sbjct: 430 KQFVFLVLVHLDLEL 444
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 299 KAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDD----- 353
+A+++ ++ + A W + +L+K+P + V+ E+ S++ + V +
Sbjct: 265 RALVLQLWATQGNMGPAAF-WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323
Query: 354 -VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSI--IDGYEIPAKT---LVYVNAWAIG 407
+ L +V+ E++RL AP + + ++ DG E + L+ +
Sbjct: 324 VLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQ 382
Query: 408 RDPEAWENPEEFNPERFID----RSVDF-----KGKNFEFIPFGAGRRICPGMHLGIATV 458
RDPE + +PE F RF++ DF + KN+ +P+GAG C G + ++
Sbjct: 383 RDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYN-MPWGAGHNHCLGRSYAVNSI 441
Query: 459 DLALANLLYKFDWEM 473
+ +L D E+
Sbjct: 442 KQFVFLVLVHLDLEL 456
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 276
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 277 EELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 335
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 336 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 236 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 276
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 277 EELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 335
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 336 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 275
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 276 EELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 334
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 27/165 (16%)
Query: 305 IFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364
+ VAG T + + L +HP + +++ N S + V
Sbjct: 235 LLVAGNATMVNMIALGVATLAQHPDQLAQLK--------ANPSLAPQ-----------FV 275
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E R L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 276 EELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR- 334
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 -------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 14/138 (10%)
Query: 335 QEEIRSLVGGNKSFVDED-DV--QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGY 391
E +L+G +DE+ D+ L V+ET+R P L R E S I+
Sbjct: 190 NETTTNLIGNMIRVIDENPDIIDDALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNK 249
Query: 392 EIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGM 451
+I V V + RD ++ P+ F G+ + FG G +C G
Sbjct: 250 KIKKGDQVIVYLGSANRDETFFDEPDLFKI-----------GRREMHLAFGIGIHMCLGA 298
Query: 452 HLGIATVDLALANLLYKF 469
L +AL ++L F
Sbjct: 299 PLARLEASIALNDILNHF 316
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 --------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 380 RETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439
R E I G I A VYV+ A RDPE + +P+ +DF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 440 PFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
FG G CPG L +L + +L + PG+K
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 --------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 8/106 (7%)
Query: 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423
V+E R + L + R E +I + A + + + RD E +ENP+EFN R
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
Query: 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
K + + FG G C HL A + + L KF
Sbjct: 335 --------KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 380 RETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439
R E I G I A VYV+ A RDPE + +P+ +DF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 440 PFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
FG G CPG L +L + +L + PG+K
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 380 RETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439
R E I G I A VYV+ A RDPE + +P+ +DF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 440 PFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
FG G CPG L +L + +L + PG+K
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 388 IDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI 447
I G I A VYV+ A RDPE + +P+ +DF+ + FG G
Sbjct: 303 IKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHY 352
Query: 448 CPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
CPG L +L + +L + PG+K
Sbjct: 353 CPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 388 IDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI 447
I G I A VYV+ A RDPE + +P+ +DF+ + FG G
Sbjct: 303 IKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHVSFGFGPHY 352
Query: 448 CPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
CPG L +L + +L + PG+K
Sbjct: 353 CPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 30/173 (17%)
Query: 297 HIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQE 356
+I A + I AG DT++++ + L ++P E +L + + +
Sbjct: 256 YINAYYVAIATAGHDTTSSSSGGAIIGLSRNP--------EQLALAKSDPALIPR----- 302
Query: 357 LHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENP 416
+V E +R P + R + + G I + ++ + RD E + NP
Sbjct: 303 ------LVDEAVRWTAPVKSFM-RTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNP 355
Query: 417 EEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+EF+ RF +R + FG G +C G HL + + LL K
Sbjct: 356 DEFDITRFPNRHLG----------FGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 380 RETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439
R E I G I A VYV+ A RDPE + +P+ +DF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 440 PFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
FG G CPG L +L + +L + PG+K
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 15/99 (15%)
Query: 380 RETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439
R E I G I A VYV+ A RDPE + +P+ +DF+ +
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDR----------IDFERSPNPHV 344
Query: 440 PFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
FG G CPG L +L + +L + PG+K
Sbjct: 345 SFGFGPHYCPGGMLARLESELLVDAVLDRV-----PGLK 378
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 21/130 (16%)
Query: 294 TLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDD 353
T+D + + N+ G DT AA + +L +HP + ++E
Sbjct: 220 TVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERP--------------- 264
Query: 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413
+ A E MR P + V R DG I LVY+ + DP ++
Sbjct: 265 ----DLIPAAADELMRRYP--TVAVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF 318
Query: 414 ENPEEFNPER 423
E PEE +R
Sbjct: 319 EAPEEVRFDR 328
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 278 DVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE 337
DVL + + L+ + A++ I AGTDT+ + + + L++ P ++ V+ E
Sbjct: 224 DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
Query: 338 IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKT 397
G ++ +DE L + + T+R R+ E G I
Sbjct: 284 ----PGLMRNALDE----VLRFENILRIGTVRFA--------RQDLEYC---GASIKKGE 324
Query: 398 LVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIAT 457
+V++ + RD + P+ F+ R S + +G G +CPG+ L
Sbjct: 325 MVFLLIPSALRDGTVFSRPDVFDVRRDTSAS----------LAYGRGPHVCPGVSLARLE 374
Query: 458 VDLALANLLYKF 469
++A+ + +F
Sbjct: 375 AEIAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 278 DVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE 337
DVL + + L+ + A++ I AGTDT+ + + + L++ P ++ V+ E
Sbjct: 224 DVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
Query: 338 IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKT 397
G ++ +DE L + + T+R R+ E G I
Sbjct: 284 ----PGLMRNALDE----VLRFDNILRIGTVRFA--------RQDLEYC---GASIKKGE 324
Query: 398 LVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIAT 457
+V++ + RD + P+ F+ R S + +G G +CPG+ L
Sbjct: 325 MVFLLIPSALRDGTVFSRPDVFDVRRDTSAS----------LAYGRGPHVCPGVSLARLE 374
Query: 458 VDLALANLLYKF 469
++A+ + +F
Sbjct: 375 AEIAVGTIFRRF 386
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 362 AVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP 421
A++ E +R+ PP L R TE I G I A + + A RDPE +++P+ F+
Sbjct: 268 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD 470
R S + FG G C G + A A L +++
Sbjct: 327 TRPPAASRNLS--------FGLGPHSCAGQIISRAEATTVFAVLAERYE 367
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 362 AVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP 421
A++ E +R+ PP L R TE I G I A + + A RDPE +++P+ F+
Sbjct: 266 AIINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD 470
R S + FG G C G + A A L +++
Sbjct: 325 TRPPAASRNLS--------FGLGPHSCAGQIISRAEATTVFAVLAERYE 365
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 355 QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWE 414
+E YLKA+ +E +R PP V R+T E+ + I V V + RD E +
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTV-RKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 415 NPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ E+F P+R + + FG+G +C G L +A+ +F
Sbjct: 294 DGEKFIPDRNPN----------PHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 355 QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWE 414
+E YLKA+ +E +R PP V R+T E+ + I V V + RD E +
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTV-RKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFH 293
Query: 415 NPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+ E+F P+R + + FG+G +C G L +A+ +F
Sbjct: 294 DGEKFIPDRNPN----------PHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +CPG HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCPGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Query: 398 LVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHL 453
+V V A A RDP ++ P++F+ ER + FGAG R C G +L
Sbjct: 303 VVVVLAGAANRDPRRYDRPDDFDIER----------DPVPSMSFGAGMRYCLGSYL 348
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDE 351
+LT D + + M + AG D+ A+ + + L HP + R+ + D
Sbjct: 225 ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHP--------DQRA-----AALADP 271
Query: 352 DDVQELHYLKAVVKETMRL-QPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDP 410
D + V+E +R + +L PR +E G I A LV + D
Sbjct: 272 D------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDE 325
Query: 411 EAWENPEEFNPER 423
A+ PEEF+ R
Sbjct: 326 RAFTGPEEFDAAR 338
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 34/187 (18%)
Query: 292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDE 351
++T + +K + + + G +T A + + + L+ +P ++ + E
Sbjct: 229 NVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKA---------- 278
Query: 352 DDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPE 411
+ VV E +R P PR + +IDG I A V + RD
Sbjct: 279 ---------ERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEA 329
Query: 412 AWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDW 471
+P+ + R + FG G C G L + + +A Y+ W
Sbjct: 330 LTPDPDVLDANR----------AAVSDVGFGHGIHYCVGAALARSMLRMA-----YQTLW 374
Query: 472 EMPPGMK 478
PG++
Sbjct: 375 RRFPGLR 381
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 97/256 (37%), Gaps = 41/256 (16%)
Query: 224 TDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQI 283
D+ F W +QE+ + + +D +R + +DLV L+Q
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEP---TDDLVSALVQA 232
Query: 284 RKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVG 343
R + L+ + + + + VAG +++ + + LM P E+R
Sbjct: 233 RDQQD---SLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRP--------ELR---- 277
Query: 344 GNKSFVDEDDVQELHYLKAVVKETMRLQP-PAPLLVPRETTEKSIIDGYEIPAKTLVYVN 402
+ +D ++ + + V+E R P VPR E + G I A V +
Sbjct: 278 --RQLLDRPEL-----IPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLAS 330
Query: 403 AWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLAL 462
A RD + + + + +DR+ + + + FG G C G L + +AL
Sbjct: 331 TGAANRDQAQFPDADRID----VDRTPN------QHLGFGHGVHHCLGAPLARVELQVAL 380
Query: 463 ANLLYKFDWEMPPGMK 478
LL + PG++
Sbjct: 381 EVLLQRL-----PGIR 391
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 29/164 (17%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
M + +AG +T+A+ ++ L+ HP ++ + RSLV G
Sbjct: 239 MLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLVPG------------------ 279
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE 422
V+E +R A + R T ++G I A V V RD +E+P+
Sbjct: 280 AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD----- 334
Query: 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLL 466
++D + FG G C G +L +++ L L+
Sbjct: 335 -----ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 29/164 (17%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
M + +AG +T+A+ ++ L+ HP ++ + RSLV G
Sbjct: 239 MLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLVPG------------------ 279
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE 422
V+E +R A + R T ++G I A V V RD +E+P+
Sbjct: 280 AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD----- 334
Query: 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLL 466
++D + FG G C G +L +++ L L+
Sbjct: 335 -----ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 29/164 (17%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
M + +AG +T+A+ ++ L+ HP ++ + RSLV G
Sbjct: 239 MLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLVPG------------------ 279
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE 422
V+E +R A + R T ++G I A V V RD +E+P+
Sbjct: 280 AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD----- 334
Query: 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLL 466
++D + FG G C G +L +++ L L+
Sbjct: 335 -----ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 29/164 (17%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
M + +AG +T+A+ ++ L+ HP ++ + RSLV G
Sbjct: 239 MLLLIAGHETTASMTSLSVITLLDHPEQYAALRAD-RSLVPG------------------ 279
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE 422
V+E +R A + R T ++G I A V V RD +E+P+
Sbjct: 280 AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD----- 334
Query: 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLL 466
++D + FG G C G +L +++ L L+
Sbjct: 335 -----ALDIHRSARHHLAFGFGVHQCLGQNLARLELEVILNALM 373
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 388 IDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI 447
+ G I A VYV+ A RDP+ + +P+ + +DR + + +G G
Sbjct: 306 VHGTRIAAGEPVYVSYLAANRDPDVFPDPDRID----LDRDPN------PHLAYGNGHHF 355
Query: 448 CPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
C G L +L + LL + PG++
Sbjct: 356 CTGAVLARMQTELLVDTLLERL-----PGLR 381
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 339 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 391
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 338 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 390
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 329 VDFSRQKVSHTTFGHGSHLCLGQHLARLQIIVTLKEWLTRIPDFSIAPGAQIQ 381
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 40/198 (20%)
Query: 292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDE 351
D T + ++ + + +AG D + + + +++HP E+I + G +S +
Sbjct: 220 DATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP-------EQIDAFRGDEQSA--Q 270
Query: 352 DDVQEL-HYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDP 410
V EL YL P +P PR E + G EI V + A RDP
Sbjct: 271 RAVDELIRYLTV---------PYSP--TPRIAREDLTLAGQEIKKGDSVICSLPAANRDP 319
Query: 411 EAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD 470
P+ +DR +D + + FG G C LG A L L + +
Sbjct: 320 -------ALAPD--VDR-LDVTREPIPHVAFGHGVHHC----LGAALARLELRTVFTEL- 364
Query: 471 WEMPPGMK----KQDLDF 484
W P ++ QD +F
Sbjct: 365 WRRFPALRLADPAQDTEF 382
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 15/91 (16%)
Query: 388 IDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI 447
+ G I A VYV+ A RDP+ + +P+ + +DR + + +G G
Sbjct: 306 VHGTRIAAGEPVYVSYLAANRDPDVFPDPDRID----LDRDPN------PHLAYGNGHHF 355
Query: 448 CPGMHLGIATVDLALANLLYKFDWEMPPGMK 478
C G L +L + LL + PG++
Sbjct: 356 CTGAVLARMQTELLVDTLLERL-----PGLR 381
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 329 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 381
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 329 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 381
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQ 480
VDF + FG G +C G HL + + L L + D+ + PG + Q
Sbjct: 329 VDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ 381
>pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F96|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F97|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F97|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F9F|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|C Chain C, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|D Chain D, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|E Chain E, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|F Chain F, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|3VDM|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDM|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDN|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
Length = 497
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 75 FVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPY--GEYWREIRK 131
F ++ SSA+ A HD Q G PA + QR L + P+ +YWR + K
Sbjct: 138 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 196
>pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form
pdb|3T5T|B Chain B, Vall From Streptomyces Hygroscopicus In Apo Form
Length = 496
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 75 FVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPY--GEYWREIRK 131
F ++ SSA+ A HD Q G PA + QR L + P+ +YWR + K
Sbjct: 137 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 195
>pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
pdb|3T7D|B Chain B, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
Length = 497
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 75 FVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPY--GEYWREIRK 131
F ++ SSA+ A HD Q G PA + QR L + P+ +YWR + K
Sbjct: 138 FADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 196
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 11/104 (10%)
Query: 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424
+E +R + P R TT + G I V + + RDP W++P+ +
Sbjct: 289 EEAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY----- 342
Query: 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYK 468
D K + FG+G +C G + ++ LA L K
Sbjct: 343 -----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 28/167 (16%)
Query: 303 MNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362
+ F AG ++ + L + L++ P++ + E+ + G V+EL +
Sbjct: 228 VTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAG---------VEELLRINL 278
Query: 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE 422
+ + PR T + + LV V DPE + NP
Sbjct: 279 AFADGL----------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE-- 326
Query: 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF 469
+DR + FG G+ CPG LG + + LL K
Sbjct: 327 --LDRP-----NPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,481,467
Number of Sequences: 62578
Number of extensions: 597346
Number of successful extensions: 1876
Number of sequences better than 100.0: 221
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 1406
Number of HSP's gapped (non-prelim): 299
length of query: 509
length of database: 14,973,337
effective HSP length: 103
effective length of query: 406
effective length of database: 8,527,803
effective search space: 3462288018
effective search space used: 3462288018
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)