Query         038171
Match_columns 509
No_of_seqs    202 out of 1993
Neff          11.3
Searched_HMMs 46136
Date          Fri Mar 29 08:19:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038171.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038171hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-89 2.4E-94  650.0  47.5  462   31-506    25-488 (489)
  2 PLN03234 cytochrome P450 83B1; 100.0 7.7E-83 1.7E-87  626.9  49.1  471   29-505    25-498 (499)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0   1E-82 2.2E-87  592.3  41.5  471   17-506    16-499 (499)
  4 PLN02971 tryptophan N-hydroxyl 100.0 9.2E-82   2E-86  621.2  46.5  470   30-505    55-533 (543)
  5 PLN02966 cytochrome P450 83A1  100.0 5.6E-81 1.2E-85  612.4  47.0  471   29-504    26-498 (502)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 7.5E-81 1.6E-85  613.1  48.0  491   10-506    11-509 (517)
  7 PLN02183 ferulate 5-hydroxylas 100.0   6E-81 1.3E-85  613.6  46.2  464   29-505    33-511 (516)
  8 PLN00110 flavonoid 3',5'-hydro 100.0 1.3E-80 2.8E-85  607.5  47.5  492    3-506     3-497 (504)
  9 PLN03112 cytochrome P450 famil 100.0 5.9E-80 1.3E-84  608.1  48.8  476   27-506    27-508 (514)
 10 PTZ00404 cytochrome P450; Prov 100.0 8.5E-79 1.9E-83  595.6  45.6  456   28-505    25-482 (482)
 11 PLN00168 Cytochrome P450; Prov 100.0   2E-78 4.3E-83  596.2  48.4  469   28-506    31-517 (519)
 12 PLN02394 trans-cinnamate 4-mon 100.0 7.9E-78 1.7E-82  592.0  47.6  467   29-506    27-502 (503)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 1.7E-78 3.8E-83  586.9  38.6  456   30-507    33-497 (497)
 14 PLN02290 cytokinin trans-hydro 100.0 1.2E-77 2.6E-82  592.0  39.2  461   23-506    33-515 (516)
 15 PLN02655 ent-kaurene oxidase   100.0 6.5E-77 1.4E-81  578.1  43.1  458   34-507     1-465 (466)
 16 PLN03018 homomethionine N-hydr 100.0 1.6E-75 3.4E-80  572.1  48.7  472   27-505    35-523 (534)
 17 PLN02500 cytochrome P450 90B1  100.0 1.1E-75 2.4E-80  573.8  40.3  440   27-504    33-488 (490)
 18 KOG0159 Cytochrome P450 CYP11/ 100.0 1.5E-75 3.2E-80  530.7  36.2  455   32-506    50-518 (519)
 19 PLN02169 fatty acid (omega-1)- 100.0 9.1E-75   2E-79  565.0  42.3  450   33-505    32-499 (500)
 20 PLN02774 brassinosteroid-6-oxi 100.0 2.9E-75 6.4E-80  566.1  37.2  433   28-504    27-462 (463)
 21 PLN03195 fatty acid omega-hydr 100.0 2.3E-74 5.1E-79  568.1  40.0  456   34-506    32-516 (516)
 22 PLN02738 carotene beta-ring hy 100.0 3.1E-73 6.8E-78  561.4  42.0  443   44-507   143-596 (633)
 23 PF00067 p450:  Cytochrome P450 100.0 6.5E-75 1.4E-79  571.7  29.9  455   34-501     1-462 (463)
 24 PLN02196 abscisic acid 8'-hydr 100.0 3.1E-73 6.6E-78  551.4  39.8  431   26-504    29-461 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 3.1E-72 6.6E-77  543.8  38.2  437   28-506     3-450 (452)
 26 PLN02302 ent-kaurenoic acid ox 100.0 4.6E-71   1E-75  544.0  42.7  442   27-506    37-488 (490)
 27 PLN02936 epsilon-ring hydroxyl 100.0 1.6E-71 3.4E-76  542.6  38.6  456   32-509    12-485 (489)
 28 PLN02987 Cytochrome P450, fami 100.0 6.9E-71 1.5E-75  532.6  41.7  438   29-507    27-470 (472)
 29 PLN02426 cytochrome P450, fami 100.0 3.4E-69 7.3E-74  524.9  45.3  443   40-506    49-500 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 1.8E-67 3.9E-72  465.7  34.1  445   32-506    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 2.1E-61 4.6E-66  462.4  30.1  408   29-477    14-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.8E-56 8.2E-61  421.7  31.6  383   54-505    24-410 (411)
 33 KOG0114 Predicted RNA-binding   71.2      16 0.00036   26.6   5.4   63   28-93      8-76  (124)
 34 PF01102 Glycophorin_A:  Glycop  63.6      11 0.00023   28.9   3.5   18   10-27     77-94  (122)
 35 PF12508 DUF3714:  Protein of u  55.9     2.9 6.4E-05   35.1  -0.6   44  356-401    51-94  (200)
 36 COG3954 PrkB Phosphoribulokina  54.3      95  0.0021   25.9   7.5   61  307-368    15-87  (289)
 37 KOG3653 Transforming growth fa  49.4      71  0.0015   30.9   7.0   36   64-99    222-257 (534)
 38 PF05952 ComX:  Bacillus compet  48.5      18 0.00039   23.2   2.1   23  319-341     4-26  (57)
 39 PF14459 Prok-E2_C:  Prokaryoti  46.8     7.6 0.00017   28.2   0.4   20  433-452   102-121 (131)
 40 PRK06789 flagellar motor switc  42.8      23 0.00049   24.3   2.1   40  363-402    21-62  (74)
 41 PF05399 EVI2A:  Ectropic viral  42.8      29 0.00064   29.0   3.1   20    1-20    128-147 (227)
 42 PF09201 SRX:  SRX;  InterPro:   42.5      25 0.00054   27.2   2.5   22  447-468    19-40  (148)
 43 PF12554 MOZART1:  Mitotic-spin  40.4      89  0.0019   19.3   4.3   42  297-338     6-47  (48)
 44 PHA02681 ORF089 virion membran  39.3 1.3E+02  0.0028   20.9   6.2   20    1-20      1-20  (92)
 45 PF05393 Hum_adeno_E3A:  Human   38.0      69  0.0015   22.5   3.8    8   37-44     64-71  (94)
 46 PHA03049 IMV membrane protein;  37.7      84  0.0018   20.7   3.9   15    6-20      8-22  (68)
 47 PF05961 Chordopox_A13L:  Chord  36.5      91   0.002   20.7   4.0   15    6-20      8-22  (68)
 48 PF12273 RCR:  Chitin synthesis  35.9      18 0.00038   28.2   0.9   16   18-33     16-31  (130)
 49 COG0851 MinE Septum formation   34.6 1.2E+02  0.0026   21.5   4.6   42  303-344     4-52  (88)
 50 KOG3506 40S ribosomal protein   34.5      18 0.00039   22.7   0.6   11  439-449    12-22  (56)
 51 COG2101 SPT15 TATA-box binding  31.5      16 0.00035   29.6   0.1   38  418-455    36-73  (185)
 52 PF08492 SRP72:  SRP72 RNA-bind  31.2      32  0.0007   22.3   1.4    8  420-427    44-51  (59)
 53 PF12444 Sox_N:  Sox developmen  30.7      31 0.00068   24.3   1.3   20  457-476    61-80  (84)
 54 PF07886 BA14K:  BA14K-like pro  30.5      51  0.0011   18.2   1.8   16  434-449    16-31  (31)
 55 PHA03162 hypothetical protein;  30.4      47   0.001   25.4   2.3   24  442-465     2-25  (135)
 56 TIGR03779 Bac_Flav_CT_M Bacter  29.9      11 0.00023   35.7  -1.3   43  357-401   255-297 (410)
 57 PF13893 RRM_5:  RNA recognitio  29.7 1.5E+02  0.0032   18.6   5.2   35   59-93      2-40  (56)
 58 PRK10597 DNA damage-inducible   29.4 1.3E+02  0.0028   21.2   4.1   38   56-93     24-69  (81)
 59 cd05024 S-100A10 S-100A10: A s  29.3 2.2E+02  0.0048   20.6   5.6   37  274-311    47-83  (91)
 60 PF14129 DUF4296:  Domain of un  28.9 2.1E+02  0.0047   20.3   7.5   50  293-342    29-78  (87)
 61 PF06024 DUF912:  Nucleopolyhed  28.2      67  0.0015   23.7   2.8   14    4-17     65-78  (101)
 62 PF10717 ODV-E18:  Occlusion-de  27.7 1.7E+02  0.0037   20.5   4.4   13    8-20     31-43  (85)
 63 COG3763 Uncharacterized protei  25.9      70  0.0015   21.5   2.2   17   19-35     22-38  (71)
 64 PF09926 DUF2158:  Uncharacteri  25.0      79  0.0017   20.1   2.3   18   65-82      3-20  (53)
 65 PLN03134 glycine-rich RNA-bind  24.1 2.3E+02  0.0049   22.6   5.4   50   41-93     37-95  (144)
 66 PF14483 Cut8_M:  Cut8 dimerisa  23.3 1.3E+02  0.0027   17.6   2.7   13  324-336    23-35  (38)
 67 PF11227 DUF3025:  Protein of u  23.1      50  0.0011   28.1   1.5   20  404-423   192-211 (212)
 68 PF15330 SIT:  SHP2-interacting  22.9 2.2E+02  0.0047   21.4   4.6   11   39-49     45-55  (107)
 69 COG4471 Uncharacterized protei  22.3 1.9E+02  0.0041   20.6   3.8   35   59-93     19-53  (90)
 70 KOG1412 Aspartate aminotransfe  22.0 6.3E+02   0.014   23.3   9.3   65  292-373   342-408 (410)
 71 PRK13991 cell division topolog  21.8 2.9E+02  0.0063   19.8   4.8   18  327-344    35-52  (87)
 72 PF13625 Helicase_C_3:  Helicas  21.6 1.8E+02  0.0038   22.6   4.3   38   55-94     77-114 (129)
 73 PF08285 DPM3:  Dolichol-phosph  21.4 1.3E+02  0.0029   21.7   3.2   29  314-342    53-81  (91)
 74 KOG2376 Signal recognition par  20.8      52  0.0011   32.7   1.3    8  420-427   582-589 (652)
 75 PF06024 DUF912:  Nucleopolyhed  20.6      47   0.001   24.5   0.8   17    4-20     68-84  (101)
 76 PF01102 Glycophorin_A:  Glycop  20.5 1.2E+02  0.0027   23.3   3.0   22    7-28     70-91  (122)
 77 PF11829 DUF3349:  Protein of u  20.3 3.5E+02  0.0077   19.8   5.1   22  292-313    35-56  (96)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.1e-89  Score=649.96  Aligned_cols=462  Identities=46%  Similarity=0.820  Sum_probs=408.1

Q ss_pred             CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc-hhhhhc
Q 038171           31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA-SVATQR  109 (509)
Q Consensus        31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~-~~~~~~  109 (509)
                      .+.||||+++|++||++++....++..+.+|.++|||++.+|+|..++|||+|++.++|++++++..|.+||. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            8999999999999999999433499999999999999999999999999999999999999999999999997 334456


Q ss_pred             cccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHH
Q 038171          110 LTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLA  189 (509)
Q Consensus       110 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  189 (509)
                      ..+++.+++++.+|+.|+.+||.++..+++....+++...-.++++.+++.+.+ .+.+.+||+...+..++.++|++++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence            666788899998999999999999999999999999988889999999999987 2233899999999999999999999


Q ss_pred             hcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccc-hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171          190 FGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSP-FMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      ||.++...+  .+...++...+.+.......+.+.+++| ++.++.+..+..++......++.++++++++++++.. ..
T Consensus       184 fG~rf~~~~--~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~  260 (489)
T KOG0156|consen  184 FGRRFEEED--EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD  260 (489)
T ss_pred             hCCccccCC--chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc
Confidence            999998631  2244568888888888888888899999 6777764456677777777789999999999988765 22


Q ss_pred             cccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCC
Q 038171          269 ADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSF  348 (509)
Q Consensus       269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~  348 (509)
                       +.. .|++|.|+...+++.... +++++|...+.++++||.|||++|+.|++.+|++||++|+|+++||++++|.+ +.
T Consensus       261 -~~~-~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~-r~  336 (489)
T KOG0156|consen  261 -EEG-RDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKG-RL  336 (489)
T ss_pred             -CCC-CcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CC
Confidence             222 799999999977554222 99999999999999999999999999999999999999999999999999987 45


Q ss_pred             CChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCC
Q 038171          349 VDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRS  428 (509)
Q Consensus       349 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~  428 (509)
                      ++.+|+.+||||+|||+||+|+||++|+.+||.+++|+.++||.|||||.|+++.|++||||++|+||++|+||||++++
T Consensus       337 v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~  416 (489)
T KOG0156|consen  337 VSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN  416 (489)
T ss_pred             CChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999985


Q ss_pred             CCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171          429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       429 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                       +.+.....++|||.|.|+|||..+|.+++.+++|.||++|+|+++++    ++++... +.++..++++.....+|.
T Consensus       417 -d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  417 -DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             -cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcceeeeecCC
Confidence             33336788999999999999999999999999999999999998876    3345555 488888889988888773


No 2  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=7.7e-83  Score=626.92  Aligned_cols=471  Identities=48%  Similarity=0.895  Sum_probs=387.5

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171           29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ  108 (509)
Q Consensus        29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (509)
                      ++.+.||||+++|++||++.+...+++.++.+++++||++|++++|+.++|+++||+++++++.++...|..++......
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            34578999999999999988844468889999999999999999999999999999999999998877888777543333


Q ss_pred             ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171          109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL  188 (509)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~  188 (509)
                      .....+....++..++.|+++||.+..++|+++++..+.+.+++.++++++.+.....+++++|+.+.+..+++|+++++
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence            22222344445667899999999866789999999999999999999999999876666778999999999999999999


Q ss_pred             HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171          189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      +||.+++..+   .....+.+.+.+.............+|++.++..+.+..++..++.+.+.+++.++++++++....+
T Consensus       185 ~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (499)
T PLN03234        185 AFGKRYNEYG---TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK  261 (499)
T ss_pred             HhCCcccccc---hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            9999887532   1223344444443332222223344566555444444556778888999999999998876543222


Q ss_pred             cccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCC
Q 038171          269 ADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSF  348 (509)
Q Consensus       269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~  348 (509)
                      .. . .|+++.|++..++++....+++++|.+++.++++||+||||++++|++++|++||++|+++++|+++++++. +.
T Consensus       262 ~~-~-~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~-~~  338 (499)
T PLN03234        262 QE-T-ESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-GY  338 (499)
T ss_pred             CC-c-ccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CC
Confidence            11 2 789999998765433234689999999999999999999999999999999999999999999999999764 66


Q ss_pred             CChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCC-CCCCCCCCCcCCCC
Q 038171          349 VDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDR  427 (509)
Q Consensus       349 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~  427 (509)
                      ++++++.+|||++|||+||||++|++|+.++|.+.+|++++||.|||||.|+++++++||||++| +||++||||||+++
T Consensus       339 ~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~  418 (499)
T PLN03234        339 VSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKE  418 (499)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCC
Confidence            89999999999999999999999999987789999999999999999999999999999999999 89999999999976


Q ss_pred             CCC--CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171          428 SVD--FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH  505 (509)
Q Consensus       428 ~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (509)
                      +..  .+.....++|||+|+|+|+|+++|++|+++++|.|+++|+|+++++.+++.+......+++.+|++++.+.+++|
T Consensus       419 ~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        419 HKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            432  233467899999999999999999999999999999999999987755455666677899999999888888876


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-82  Score=592.27  Aligned_cols=471  Identities=27%  Similarity=0.423  Sum_probs=366.9

Q ss_pred             HHHHHhhhcccCCCCCCCCCCCCCcccccccCCCC-CCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCC
Q 038171           17 LFFVLRRHVTSSYASSLPPGPKGLPFIGNLHQFDS-SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHD   95 (509)
Q Consensus        17 ~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~   95 (509)
                      ++|+++.+...++.++..|+|+++|++||+..+.. +.+.....+...++|+++.++.+.+|.++|+|||.+++|+.+..
T Consensus        16 l~y~~~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F   95 (499)
T KOG0158|consen   16 LLYLWLRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDF   95 (499)
T ss_pred             HHHHHHHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhC
Confidence            33444444344455557788888999999988742 22233344444444999999999999999999999999999999


Q ss_pred             ccccCCC--chhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccch
Q 038171           96 LQFSGRP--ASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNL  173 (509)
Q Consensus        96 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~  173 (509)
                      ++|.++.  .......  ..+...+|+..|+.||++|.. ++|.||..+++.+.+.+++.++++++.+.+....+..+++
T Consensus        96 ~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~-lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~  172 (499)
T KOG0158|consen   96 DNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTK-LSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEI  172 (499)
T ss_pred             ccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHh-hccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccH
Confidence            9999854  2222111  123456778889999999998 8999999999999999999999999999886554468999


Q ss_pred             HHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHh-hhhhc----cccccchhhhhhhhhhHHHHHHHHHH
Q 038171          174 SEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQAL-SIAFF----VTDYSPFMGWIDKLTGMMRRLENNVQ  248 (509)
Q Consensus       174 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~  248 (509)
                      .+.+.+++.|||++++||.+.+...   ....++.......... ...+.    ....+|.+...  + .......+..+
T Consensus       173 ~dl~~~yT~DVI~~~AfG~~~~s~~---d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l-~~~~~~~~~~~  246 (499)
T KOG0158|consen  173 KDLCARYTTDVIGSCAFGLDANSLR---DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--L-RVKLFPEDVTD  246 (499)
T ss_pred             HHHHHHHHHHHHhHhhcccchhhhc---CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--h-hcccChHHHHH
Confidence            9999999999999999999998864   1334444433333322 11111    11122222211  0 11122333444


Q ss_pred             HHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHh---cCCCC-CCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHH
Q 038171          249 ESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKH---RGFKV-DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYL  324 (509)
Q Consensus       249 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~~~~-~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L  324 (509)
                      -+.+.+...++.|..+   +  ...+|+++.|++++.+   +.... .++.++|+++++.|++||.||||++|++++|+|
T Consensus       247 ~~~~~v~~~v~~R~~~---~--~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeL  321 (499)
T KOG0158|consen  247 FFRKLVNSRVEQREKE---N--IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYEL  321 (499)
T ss_pred             HHHHHHHHHHHHHHhc---C--CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHH
Confidence            4555566666665221   1  1228999999999854   11112 599999999999999999999999999999999


Q ss_pred             hhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCcccc-CceeCCCCEEEeeh
Q 038171          325 MKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIID-GYEIPAKTLVYVNA  403 (509)
Q Consensus       325 ~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~  403 (509)
                      |+||++|+|||+||+++.....+ +++|.+.+|+||++||+||||+||++|. +.|.+++|.+++ ++.||||+.|.+++
T Consensus       322 A~~PdvQ~kLreEI~~~~~~~~~-ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~~~i~~~~~i~kG~~V~Ip~  399 (499)
T KOG0158|consen  322 AKNPDVQDKLREEIDEVLEEKEG-LTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKDYEIPGGFVIPKGTPVMIPT  399 (499)
T ss_pred             hcChHHHHHHHHHHHHHhcccCC-CCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCceecCCCeEeCCCCEEEeec
Confidence            99999999999999999877644 9999999999999999999999999998 679999999999 99999999999999


Q ss_pred             hhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCC
Q 038171          404 WAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLD  483 (509)
Q Consensus       404 ~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~  483 (509)
                      +++||||++||||++|+||||.+++.+ ..++..|+|||.|||+|+|.+||++|+|+.|++||++|+++..+ ....+ .
T Consensus       400 ~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~-~t~~~-~  476 (499)
T KOG0158|consen  400 YALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCP-TTIIP-L  476 (499)
T ss_pred             ccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCC-cccCc-c
Confidence            999999999999999999999987654 34678899999999999999999999999999999999999877 33222 3


Q ss_pred             CCCCCCceeeeccceEEEEeecc
Q 038171          484 FDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                      .....+.++.|++++++++++|.
T Consensus       477 ~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  477 EGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCCccceeeecCCceEEEEEeCC
Confidence            33334899999999999999984


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9.2e-82  Score=621.21  Aligned_cols=470  Identities=26%  Similarity=0.498  Sum_probs=369.1

Q ss_pred             CCCCCCCCCCCcccccccCCCCCC-CchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171           30 ASSLPPGPKGLPFIGNLHQFDSSK-PHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT  107 (509)
Q Consensus        30 ~~~~ppgp~~~p~~G~~~~~~~~~-~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (509)
                      +.+.||||+++|++||++.+.... .+..+.+|.++|| +++++++|++++|+|+||+.+++++.++...|..++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            457899999999999998874333 3567889999999 79999999999999999999999999988888888754332


Q ss_pred             hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHH
Q 038171          108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICR  187 (509)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~  187 (509)
                      .....+..+++++.+|+.|+++||.+..+++++...+.+.+.++++++.+++.+.+...+++++|+.+.+.+++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            22222223467888899999999996677787777777888888888899888776545567899999999999999999


Q ss_pred             HHhcCCCCCCcc--chhhhhHHHHHHHHHHHhhhh---hccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171          188 LAFGKRSDGNEE--AISGRSRFHTLLSEIQALSIA---FFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHL  262 (509)
Q Consensus       188 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (509)
                      ++||.+......  ......+..+.+.........   ..+.+++|++.++. +.+..+...+..+.+.+++.+.+++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  293 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLD-LNGHEKIMRESSAIMDKYHDPIIDERI  293 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998743110  000111222233333322111   12334556554432 112334455566777888888888776


Q ss_pred             CccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171          263 DPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV  342 (509)
Q Consensus       263 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  342 (509)
                      +..+.+......|+++.|++..++++ ...+++++|.+++.++++||+|||+++++|++++|+.||++|+|+++||++++
T Consensus       294 ~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~  372 (543)
T PLN02971        294 KMWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVV  372 (543)
T ss_pred             HHHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            43222111112699999998654322 12489999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCC
Q 038171          343 GGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE  422 (509)
Q Consensus       343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  422 (509)
                      +.+ +.++++++.+|||++|||+||||++|++|+.++|.+.+|++++||.|||||.|++++|++||||++|+||++|+||
T Consensus       373 g~~-~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~Pe  451 (543)
T PLN02971        373 GKE-RFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPE  451 (543)
T ss_pred             CCC-CCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcc
Confidence            864 6799999999999999999999999999987899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCC--CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEE
Q 038171          423 RFIDRSVD--FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVL  500 (509)
Q Consensus       423 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (509)
                      ||+++...  ....++.++|||+|+|+|+|++||++|+++++|+||++|+|++.++..  .++.....+ ++..++++.+
T Consensus       452 Rfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~  528 (543)
T PLN02971        452 RHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSET--RVELMESSH-DMFLSKPLVM  528 (543)
T ss_pred             cCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCC--CcchhhhcC-ccccccccee
Confidence            99975422  112456799999999999999999999999999999999999876542  345556666 7767779999


Q ss_pred             EEeec
Q 038171          501 LAKYH  505 (509)
Q Consensus       501 ~~~~~  505 (509)
                      .+++|
T Consensus       529 ~~~~~  533 (543)
T PLN02971        529 VGELR  533 (543)
T ss_pred             eeeec
Confidence            99998


No 5  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=5.6e-81  Score=612.41  Aligned_cols=471  Identities=43%  Similarity=0.829  Sum_probs=371.8

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171           29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ  108 (509)
Q Consensus        29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (509)
                      ...+.||||+++|++||++.+...+++.++.+|+++||++|++++|+.++|+|+||+.+++++.++...|.+++......
T Consensus        26 ~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~  105 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE  105 (502)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence            34578999999999999998855578899999999999999999999999999999999999998776676554332222


Q ss_pred             ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171          109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL  188 (509)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~  188 (509)
                      ....+..+..++.+|+.|+++|+.++++.|+..++..+.+.++++++++++.|.+...+++++|+.+++..+++|+++.+
T Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~  185 (502)
T PLN02966        106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ  185 (502)
T ss_pred             eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence            22222233445667999999999877899999999999999999999999999876556678999999999999999999


Q ss_pred             HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171          189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      +||.+++..+   .....+.+.+...........+..++|++..+..+....+......+...+++.+.+++..+.....
T Consensus       186 ~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (502)
T PLN02966        186 AFGKKYNEDG---EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK  262 (502)
T ss_pred             HhCCccCccc---hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            9999887532   1223344444443333332223344554333322222223334455566666777766654332111


Q ss_pred             cccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCC-C
Q 038171          269 ADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNK-S  347 (509)
Q Consensus       269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~-~  347 (509)
                      .+  ..|+++.|+++.++...+..++++++.++++++++||+|||+++++|++++|++||++|+|+++||+++++.++ +
T Consensus       263 ~~--~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~  340 (502)
T PLN02966        263 PE--TESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGST  340 (502)
T ss_pred             cc--cccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCC
Confidence            11  16899999987654322346899999999999999999999999999999999999999999999999987532 3


Q ss_pred             CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCC-CCCCCCCCCcCCC
Q 038171          348 FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFID  426 (509)
Q Consensus       348 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~  426 (509)
                      .++++++++|||++|||+||||++|++|+.++|.+.+|++++||.|||||.|.++++++||||++| |||++|+||||++
T Consensus       341 ~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~  420 (502)
T PLN02966        341 FVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLE  420 (502)
T ss_pred             cCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcC
Confidence            579999999999999999999999999987789999999999999999999999999999999999 9999999999997


Q ss_pred             CCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171          427 RSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY  504 (509)
Q Consensus       427 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (509)
                      +..........++|||+|+|+|+|++||++|+++++|.||++|+|++.++.+.+.++.+...+++..+++++.++..+
T Consensus       421 ~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (502)
T PLN02966        421 KEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPEK  498 (502)
T ss_pred             CCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEEe
Confidence            543222345679999999999999999999999999999999999998876555566666678887666666655444


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=7.5e-81  Score=613.09  Aligned_cols=491  Identities=37%  Similarity=0.728  Sum_probs=390.7

Q ss_pred             HHHHHHHHHHHHhhh-cccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHH
Q 038171           10 LLCLPIFLFFVLRRH-VTSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAK   88 (509)
Q Consensus        10 ~l~~~~~~~~~~~~~-~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~   88 (509)
                      +++++++++++++.. ..++...+.||||.++|++||++.+ ..+++..+.+|+++||++|++++|+.++|+++||++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~   89 (517)
T PLN02687         11 TVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAA   89 (517)
T ss_pred             HHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHH
Confidence            444455555554333 2334455689999999999999888 56788999999999999999999999999999999999


Q ss_pred             HHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccC
Q 038171           89 ETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAAS  168 (509)
Q Consensus        89 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  168 (509)
                      +++.++...|..++...........+.+++++.+|+.|+++||.+..+.|+.++++.+.+.++++++++++.+.+.. ++
T Consensus        90 ~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~  168 (517)
T PLN02687         90 QFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GT  168 (517)
T ss_pred             HHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CC
Confidence            99998877788776543322232334567888889999999999544899999999999999999999999997642 45


Q ss_pred             CccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHH
Q 038171          169 KQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQ  248 (509)
Q Consensus       169 ~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~  248 (509)
                      +++|+.+++..+++|+++..+||.++...+.. .....+.+.+...............+|++.++.. ....++..+..+
T Consensus       169 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~-~~~~~~~~~~~~  246 (517)
T PLN02687        169 APVNLGQLVNVCTTNALGRAMVGRRVFAGDGD-EKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL-QGVVGKMKRLHR  246 (517)
T ss_pred             CceeHHHHHHHHHHHHHHHHHhCccccccCCc-chHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCc-ccHHHHHHHHHH
Confidence            68999999999999999999999987543211 1234455555555443322222245565544321 122345566677


Q ss_pred             HHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhc---CCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHh
Q 038171          249 ESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHR---GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLM  325 (509)
Q Consensus       249 ~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~  325 (509)
                      .+.+++.++++++++....+... ..|+++.|+++.++.   +.+..++++++.+++.++++||+|||+++++|++++|+
T Consensus       247 ~~~~~~~~~i~~r~~~~~~~~~~-~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~  325 (517)
T PLN02687        247 RFDAMMNGIIEEHKAAGQTGSEE-HKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELI  325 (517)
T ss_pred             HHHHHHHHHHHHHHHhccccCcc-cccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHH
Confidence            88888999998887654321111 279999999876532   11246999999999999999999999999999999999


Q ss_pred             hChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhh
Q 038171          326 KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWA  405 (509)
Q Consensus       326 ~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~  405 (509)
                      +||++|+++++|++++.+.+ +.++.+++.+||||+|||+||||++|+++..++|.+.+|++++||.||+||.|.++.++
T Consensus       326 ~~P~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~  404 (517)
T PLN02687        326 RHPDILKKAQEELDAVVGRD-RLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWA  404 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCC-CCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHH
Confidence            99999999999999998765 67899999999999999999999999999878899999999999999999999999999


Q ss_pred             hcCCCCCCCCCCCCCCCcCCCCCCC----CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCc
Q 038171          406 IGRDPEAWENPEEFNPERFIDRSVD----FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQD  481 (509)
Q Consensus       406 ~~~d~~~~~dp~~F~P~R~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~  481 (509)
                      +||||++|+||++|+||||++++..    .......++|||+|+|+|+|++||++|+++++|+||++|++++.++...++
T Consensus       405 ~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~  484 (517)
T PLN02687        405 IARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDK  484 (517)
T ss_pred             hcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCccc
Confidence            9999999999999999999975321    122456799999999999999999999999999999999999877654334


Q ss_pred             CCCCCCCCceeeeccceEEEEeecc
Q 038171          482 LDFDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                      ++.....++++.++.++.+++++|.
T Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        485 LNMEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             CCcccccceeeecCCCeEEeeccCC
Confidence            4444456777778888999999884


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=6e-81  Score=613.62  Aligned_cols=464  Identities=42%  Similarity=0.808  Sum_probs=371.9

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171           29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ  108 (509)
Q Consensus        29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (509)
                      .+.+.||||+++|++||++.+ ....+..+.+|+++||++|++++|+.++|+|+||+++++++.++...|..++......
T Consensus        33 ~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         33 RRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            346789999999999999877 4556778999999999999999999999999999999999998877777776543322


Q ss_pred             ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171          109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL  188 (509)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~  188 (509)
                      ....++.+++++.+|+.|+++||.++.++|+...++.+.+. .++++.+++.+..  ..++++|+.+++..+++|+++.+
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~vi~~~  188 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSS--NIGKPVNIGELIFTLTRNITYRA  188 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHh--cCCCcEeHHHHHHHHHHHHHHhH
Confidence            22222346788888999999999866889999999988886 4688999999864  34678999999999999999999


Q ss_pred             HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171          189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      +||.+.+.      ..+.+.+.+..+............+|++.++.. ....++..+..+.+.+++.+.++++.+..+.+
T Consensus       189 ~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  261 (516)
T PLN02183        189 AFGSSSNE------GQDEFIKILQEFSKLFGAFNVADFIPWLGWIDP-QGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQ  261 (516)
T ss_pred             hhcCcccc------hHHHHHHHHHHHHHHhCCccHHHhcchhHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            99987653      224455555555444333333455666554321 12344566677778888888777665432211


Q ss_pred             -----cccCcchHHHHHHHHHHhcC---------CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHH
Q 038171          269 -----ADMQQEDLVDVLLQIRKHRG---------FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKV  334 (509)
Q Consensus       269 -----~~~~~~d~l~~ll~~~~~~~---------~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l  334 (509)
                           .+....|+++.|+++..++.         ....++++++.+++.++++||+||||++++|++++|++||++|+|+
T Consensus       262 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl  341 (516)
T PLN02183        262 NADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRV  341 (516)
T ss_pred             ccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHH
Confidence                 11122689999998654321         1135899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCC
Q 038171          335 QEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWE  414 (509)
Q Consensus       335 ~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~  414 (509)
                      ++|++++++.+ +.++++++.+|||++|||+||||++|++|+. .|.+.+|++++||.|||||.|.++.+++||||++|+
T Consensus       342 ~~Ei~~v~~~~-~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~  419 (516)
T PLN02183        342 QQELADVVGLN-RRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWE  419 (516)
T ss_pred             HHHHHHHcCCC-CCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccC
Confidence            99999999754 5689999999999999999999999999985 599999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCCC-CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceee
Q 038171          415 NPEEFNPERFIDRSVD-FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVH  493 (509)
Q Consensus       415 dp~~F~P~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (509)
                      ||++|+||||++++.. ...+.+.++|||+|+|+|+|++||++|+++++|.|+++|++++.++.....++....++.+..
T Consensus       420 dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  499 (516)
T PLN02183        420 DPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAP  499 (516)
T ss_pred             CccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccc
Confidence            9999999999975432 223456899999999999999999999999999999999999877654333444455566666


Q ss_pred             eccceEEEEeec
Q 038171          494 KKNFLVLLAKYH  505 (509)
Q Consensus       494 ~~~~~~~~~~~~  505 (509)
                      +++++.+.+++|
T Consensus       500 ~~~~~~~~~~~r  511 (516)
T PLN02183        500 RATRLVAVPTYR  511 (516)
T ss_pred             cCCCcEEEeecC
Confidence            667888888888


No 8  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.3e-80  Score=607.46  Aligned_cols=492  Identities=33%  Similarity=0.654  Sum_probs=391.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEec
Q 038171            3 LLIVMIILLCLPIFLFFVLRRHVTSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVS   82 (509)
Q Consensus         3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~   82 (509)
                      ++..+.+..++.++..|++++. ......+.||||+++|++||++.+ ..+++.++.+|+++||+||++++|++++|+|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~   80 (504)
T PLN00110          3 LLLELAAATLLFFITRFFIRSL-LPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVAS   80 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEEC
Confidence            4444444444555555555555 344556789999999999999877 55678999999999999999999999999999


Q ss_pred             CHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHH
Q 038171           83 SAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESIS  162 (509)
Q Consensus        83 dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~  162 (509)
                      ||+++++++.+....|..++..........++.+++++.+|+.|+++|+.+..+.|+++.++.+.+.+.+++..+++.+.
T Consensus        81 dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~  160 (504)
T PLN00110         81 TPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAML  160 (504)
T ss_pred             CHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHH
Confidence            99999999998877888777543322222334567788889999999999544689999999999999999999999997


Q ss_pred             HhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHH
Q 038171          163 KSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRR  242 (509)
Q Consensus       163 ~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~  242 (509)
                      +...+++++|+.+++..+++|+|+.++||.++....  ....+++.+.+..............++|++.|+. .....++
T Consensus       161 ~~~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~  237 (504)
T PLN00110        161 ELSQRGEPVVVPEMLTFSMANMIGQVILSRRVFETK--GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMD-IQGIERG  237 (504)
T ss_pred             HhccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccC--chhHHHHHHHHHHHHHHhccccHHHHcchHhhhC-cchHHHH
Confidence            765567789999999999999999999999862211  1123456666665554333222334556554432 1123345


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHH
Q 038171          243 LENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMT  322 (509)
Q Consensus       243 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~  322 (509)
                      ..+..+.+.+++.+.++++++.......  ..|+++.|+++..+.. +..++++++.++++++++||+|||+++++|+++
T Consensus       238 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~  314 (504)
T PLN00110        238 MKHLHKKFDKLLTRMIEEHTASAHERKG--NPDFLDVVMANQENST-GEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLA  314 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccc--CCChhhHHhhcccccC-CCCCCHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            5566777778888888776654322111  1689999997643221 246999999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEee
Q 038171          323 YLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVN  402 (509)
Q Consensus       323 ~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~  402 (509)
                      +|++||++|+|+++|++++++.+ +.++++++++|||++|||+||||++|++|+.++|.+.+|++++||.|||||.|+++
T Consensus       315 ~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~  393 (504)
T PLN00110        315 EMLKNPSILKRAHEEMDQVIGRN-RRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVN  393 (504)
T ss_pred             HHHhCHHHHHHHHHHHHHHhCCC-CCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEe
Confidence            99999999999999999999765 56899999999999999999999999999878899999999999999999999999


Q ss_pred             hhhhcCCCCCCCCCCCCCCCcCCCCCCCC---CCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCC
Q 038171          403 AWAIGRDPEAWENPEEFNPERFIDRSVDF---KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKK  479 (509)
Q Consensus       403 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~~---~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~  479 (509)
                      ++++||||++|+||++|+||||++++...   ....+.++|||+|+|.|+|++||++|+++++|+|+++|++++.++.  
T Consensus       394 ~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~--  471 (504)
T PLN00110        394 IWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV--  471 (504)
T ss_pred             HHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC--
Confidence            99999999999999999999999754321   1123579999999999999999999999999999999999987653  


Q ss_pred             CcCCCCCCCCceeeeccceEEEEeecc
Q 038171          480 QDLDFDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                       ++......+++++|++++.+++++|.
T Consensus       472 -~~~~~~~~~~~~~~~~~~~~~~~~r~  497 (504)
T PLN00110        472 -ELNMDEAFGLALQKAVPLSAMVTPRL  497 (504)
T ss_pred             -ccCcccccccccccCCCceEeeccCC
Confidence             23334457889999999999999884


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.9e-80  Score=608.13  Aligned_cols=476  Identities=36%  Similarity=0.652  Sum_probs=383.6

Q ss_pred             cCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhh
Q 038171           27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVA  106 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~  106 (509)
                      .+...+.||||+++|++||++.+ ..+++..+.+|+++||++|++++|+.++++++||+.+++++.++...|..++....
T Consensus        27 ~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~  105 (514)
T PLN03112         27 MRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLA  105 (514)
T ss_pred             ccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccc
Confidence            44556789999999999999888 56788999999999999999999999999999999999999988778887765433


Q ss_pred             hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHH
Q 038171          107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTIC  186 (509)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~  186 (509)
                      .....++...++++.+|+.|+++||.+..+.|+..+++.+.+.+.++++.+++.+.+...+++++|+.+.+..+++++++
T Consensus       106 ~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~  185 (514)
T PLN03112        106 AVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVT  185 (514)
T ss_pred             ceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHH
Confidence            22222233445677789999999999667889999999999999999999999887655556789999999999999999


Q ss_pred             HHHhcCCCCCCccc-hhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 038171          187 RLAFGKRSDGNEEA-ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPK  265 (509)
Q Consensus       187 ~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (509)
                      .++||.++...+.. ......+.+.+..+...........++|++.++.. ....++..+..+.+.+++...++++++..
T Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  264 (514)
T PLN03112        186 RMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDP-YGCEKKMREVEKRVDEFHDKIIDEHRRAR  264 (514)
T ss_pred             HHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999987543211 01234455555555433222223345565544321 12335566677778888888888766543


Q ss_pred             cccc-ccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCC
Q 038171          266 RTKA-DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       266 ~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  344 (509)
                      +... .....|+++.|+++..+++ ...++++++.++++.+++||+||||++++|++++|++||++|+++++||+++++.
T Consensus       265 ~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~  343 (514)
T PLN03112        265 SGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR  343 (514)
T ss_pred             cccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC
Confidence            2211 1122699999998754332 2358999999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcC
Q 038171          345 NKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF  424 (509)
Q Consensus       345 ~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  424 (509)
                      + +.++++++++|||++|||+||+|++|++|+.++|.+.+|++++|+.|||||.|.++++++||||++|+||++||||||
T Consensus       344 ~-~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf  422 (514)
T PLN03112        344 N-RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERH  422 (514)
T ss_pred             C-CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCccc
Confidence            5 568999999999999999999999999998778999999999999999999999999999999999999999999998


Q ss_pred             CCCCC---C-CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEE
Q 038171          425 IDRSV---D-FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVL  500 (509)
Q Consensus       425 l~~~~---~-~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (509)
                      .++..   . ..+..+.++|||+|+|+|+|++||++|+++++++||++|+|++.++.+.+++......++++++++++.+
T Consensus       423 ~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (514)
T PLN03112        423 WPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRA  502 (514)
T ss_pred             CCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEE
Confidence            75421   1 1123567999999999999999999999999999999999998766544455666677888888999999


Q ss_pred             EEeecc
Q 038171          501 LAKYHE  506 (509)
Q Consensus       501 ~~~~~~  506 (509)
                      .+.||.
T Consensus       503 ~~~~r~  508 (514)
T PLN03112        503 VATPRL  508 (514)
T ss_pred             EeecCC
Confidence            999984


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=8.5e-79  Score=595.61  Aligned_cols=456  Identities=26%  Similarity=0.426  Sum_probs=359.1

Q ss_pred             CCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171           28 SYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT  107 (509)
Q Consensus        28 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (509)
                      +...+.+|||+++|++||++.+ ..+++..+.+|+++||++|++++|+.++|+++||+++++++.++...|..++.....
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~  103 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSI  103 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCccee
Confidence            3556778999999999999888 557899999999999999999999999999999999999999876667666544332


Q ss_pred             hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHH
Q 038171          108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICR  187 (509)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~  187 (509)
                      ....+ +. ++++.+|+.|+++|+. +.+.|+...++.+.+.+.+.++.+++.+.+..+.++++|+.+++.++++|+++.
T Consensus       104 ~~~~~-~~-~l~~~~g~~w~~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~  180 (482)
T PTZ00404        104 KHGTF-YH-GIVTSSGEYWKRNREI-VGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFK  180 (482)
T ss_pred             eeecc-CC-ceeccChHHHHHHHHH-HHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHH
Confidence            22111 33 4556689999999998 789999999999999999999999999976555667899999999999999999


Q ss_pred             HHhcCCCCCCccc-hhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 038171          188 LAFGKRSDGNEEA-ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKR  266 (509)
Q Consensus       188 ~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (509)
                      ++||.+.+..++. ......+.+.+..+............++++...  +....+...+..+.+.+++.+.++++++...
T Consensus       181 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  258 (482)
T PTZ00404        181 YIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL--YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID  258 (482)
T ss_pred             HHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            9999987653211 111234455454444332221111222222211  0111122344566677777777766544322


Q ss_pred             cccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCC
Q 038171          267 TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNK  346 (509)
Q Consensus       267 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~  346 (509)
                      .  .. ..|+++.|+++.++.   .....+++++++.++++||+||||++++|++++|++||++|+||++||+++++++ 
T Consensus       259 ~--~~-~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-  331 (482)
T PTZ00404        259 P--EV-PRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGR-  331 (482)
T ss_pred             C--CC-cccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCC-
Confidence            1  11 279999999875321   1233445899999999999999999999999999999999999999999999875 


Q ss_pred             CCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc-cCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCC
Q 038171          347 SFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII-DGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI  425 (509)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  425 (509)
                      +.++++++++|||++|||+||||+||++|..++|.+.+|+++ +||.|||||.|.++.+++||||++||||++||||||+
T Consensus       332 ~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl  411 (482)
T PTZ00404        332 NKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFL  411 (482)
T ss_pred             CCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccC
Confidence            568999999999999999999999999997678999999999 9999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171          426 DRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH  505 (509)
Q Consensus       426 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (509)
                      +..     .+..++|||+|+|+|+|++||++|++++++.|+++|++++.++.   +.+.....++++.| .++++.+++|
T Consensus       412 ~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~-~~~~v~~~~R  482 (482)
T PTZ00404        412 NPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYGLTLKP-NKFKVLLEKR  482 (482)
T ss_pred             CCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccceeecC-CCceeeeecC
Confidence            753     35679999999999999999999999999999999999986553   22223346777774 5799999887


No 11 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2e-78  Score=596.23  Aligned_cols=469  Identities=27%  Similarity=0.462  Sum_probs=368.0

Q ss_pred             CCCCCCCCCCCCCcccccccCCC--CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh
Q 038171           28 SYASSLPPGPKGLPFIGNLHQFD--SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV  105 (509)
Q Consensus        28 ~~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~  105 (509)
                      +...+.||||+++|++||++.+.  ..+++..+.+|+++||++|++++|+.++|+|+||+++++++.++...|..++...
T Consensus        31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            34557899999999999997652  2346788999999999999999999999999999999999998888888777643


Q ss_pred             hhhccccCCcceEe-cCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHH
Q 038171          106 ATQRLTYNGLDLIF-SPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNT  184 (509)
Q Consensus       106 ~~~~~~~~~~~~~~-~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~v  184 (509)
                      ...... .+.+++. +.+|+.|+++||.++.+.|+.+.++.+.+.+.++++.+++.+.+..+.++++|+.+.+..++.++
T Consensus       111 ~~~~~~-~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        111 SSRLLG-ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             chhhhc-cCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence            222221 1122333 36799999999866899999999999999999999999999987554556789999999999999


Q ss_pred             HHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhh-hhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038171          185 ICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALS-IAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLD  263 (509)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (509)
                      ++.++||.+++..     ....+........... ....+..++|.+.+.. .....++..++.+.+.+++..+++++++
T Consensus       190 i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (519)
T PLN00168        190 LVLMCFGERLDEP-----AVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHL-FRGRLQKALALRRRQKELFVPLIDARRE  263 (519)
T ss_pred             HHHHHcCCCcChh-----hHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987531     1222323332222111 1112223445432211 1122345556777888888888887665


Q ss_pred             cccc----cc-c----cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHH
Q 038171          264 PKRT----KA-D----MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKV  334 (509)
Q Consensus       264 ~~~~----~~-~----~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l  334 (509)
                      ....    +. .    ....|+++.|++.......+..++++++.++++++++||+|||+++++|++++|++||++|+|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl  343 (519)
T PLN00168        264 YKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKL  343 (519)
T ss_pred             HhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHH
Confidence            3210    00 0    0126899999986543222246999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCC
Q 038171          335 QEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWE  414 (509)
Q Consensus       335 ~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~  414 (509)
                      ++||+++++++.+.++++++++||||+|||+||||++|+++..++|.+.+|++++||.|||||.|.++++++||||++|+
T Consensus       344 ~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~  423 (519)
T PLN00168        344 HDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWE  423 (519)
T ss_pred             HHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccC
Confidence            99999999765466899999999999999999999999999877899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCCC----C-CCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCC
Q 038171          415 NPEEFNPERFIDRSVD----F-KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSG  489 (509)
Q Consensus       415 dp~~F~P~R~l~~~~~----~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  489 (509)
                      ||++|+||||++++..    . ....+.++|||+|+|+|||++||++|++++++.||++|+|++.++..   ++.....+
T Consensus       424 ~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~  500 (519)
T PLN00168        424 RPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDE---VDFAEKRE  500 (519)
T ss_pred             CccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCc---CChhhhce
Confidence            9999999999974321    1 11346799999999999999999999999999999999999876532   23333345


Q ss_pred             ceeeeccceEEEEeecc
Q 038171          490 ITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       490 ~~~~~~~~~~~~~~~~~  506 (509)
                      ++..+++++.+++++|+
T Consensus       501 ~~~~~~~~~~~~~~~R~  517 (519)
T PLN00168        501 FTTVMAKPLRARLVPRR  517 (519)
T ss_pred             eEEeecCCcEEEEEecc
Confidence            67778889999999986


No 12 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.9e-78  Score=591.98  Aligned_cols=467  Identities=30%  Similarity=0.571  Sum_probs=356.4

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171           29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ  108 (509)
Q Consensus        29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~  108 (509)
                      ++.+.||||++.|++|+++.+.....+..+.+|+++||++|++++|++++|+|+||+.+++++.++...|..++......
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            45678999999999999988743335678999999999999999999999999999999999988776676665433323


Q ss_pred             ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhc-cCCccchHHHHHHhHHHHHHH
Q 038171          109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAA-ASKQVNLSEKTMSLSCNTICR  187 (509)
Q Consensus       109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~~vi~~  187 (509)
                      .....+.+++++.+|+.|+++||.+..++|+.+.++.+.+.++++++.+++.+.+... .++.+++.+++..+++|+++.
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            2222344677888899999999985469999999999999999999999999976432 245699999999999999999


Q ss_pred             HHhcCCCCCCccchhhhhHHHHHHHHHHHhhhh--hccccccchhhhhhhhhhHHHHHHHHHHHHHH-HHHHHHHhhcCc
Q 038171          188 LAFGKRSDGNEEAISGRSRFHTLLSEIQALSIA--FFVTDYSPFMGWIDKLTGMMRRLENNVQESDR-FYQELIDEHLDP  264 (509)
Q Consensus       188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~  264 (509)
                      ++||.+++..+.  .....+.............  .....++|++...  +....+..........+ +....++++++.
T Consensus       187 ~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  262 (503)
T PLN02394        187 MMFDRRFESEDD--PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF--LRGYLKICQDVKERRLALFKDYFVDERKKL  262 (503)
T ss_pred             HHhCCCcccccc--hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998865321  1112222222222111111  1122334443321  11111112222222222 223345544432


Q ss_pred             ccc--ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171          265 KRT--KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV  342 (509)
Q Consensus       265 ~~~--~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  342 (509)
                      ...  .......|+++.|+++..+    ..++++++..++.++++||+||||++++|++++|++||++|++|++||++++
T Consensus       263 ~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~  338 (503)
T PLN02394        263 MSAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVL  338 (503)
T ss_pred             hhhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            110  0111127899999987543    2589999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCC
Q 038171          343 GGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE  422 (509)
Q Consensus       343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  422 (509)
                      +.+ +.++++++++||||+|||+||||++|++|+..+|.+.+|++++||.||+||.|.+++|++||||++|+||++||||
T Consensus       339 ~~~-~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~Pe  417 (503)
T PLN02394        339 GPG-NQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPE  417 (503)
T ss_pred             CCC-CCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCcc
Confidence            764 5688999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCC--CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCC-CceeeeccceE
Q 038171          423 RFIDRSVD--FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLS-GITVHKKNFLV  499 (509)
Q Consensus       423 R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  499 (509)
                      ||++++..  .......++|||+|+|+|+|++||++|+++++|.|+++|++++.++.+  +++..... +++...+.+++
T Consensus       418 Rwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  495 (503)
T PLN02394        418 RFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHST  495 (503)
T ss_pred             ccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCC--cCccccccCceeeccCCCce
Confidence            99975432  122456799999999999999999999999999999999999876642  24444444 36665666999


Q ss_pred             EEEeecc
Q 038171          500 LLAKYHE  506 (509)
Q Consensus       500 ~~~~~~~  506 (509)
                      +++.||.
T Consensus       496 ~~~~~r~  502 (503)
T PLN02394        496 VVFKPRS  502 (503)
T ss_pred             EEeecCC
Confidence            9999996


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.7e-78  Score=586.92  Aligned_cols=456  Identities=29%  Similarity=0.502  Sum_probs=367.5

Q ss_pred             CCCCCCCCCCCcccccccCCCCC--CCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh-h
Q 038171           30 ASSLPPGPKGLPFIGNLHQFDSS--KPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV-A  106 (509)
Q Consensus        30 ~~~~ppgp~~~p~~G~~~~~~~~--~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~-~  106 (509)
                      ....||||+++|++|++..+...  +...++.++..+||++|+.|+|+.++|+++||+.+++|+.++...+...+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            56788999999999999988533  55667889999999999999999999999999999999976555554444443 2


Q ss_pred             hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHH
Q 038171          107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTIC  186 (509)
Q Consensus       107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~  186 (509)
                      ....  .|.+++++. |+.|+++||+ +.+.|+...++.+...+.+....++..+.... .++.+|+++.++++++|+||
T Consensus       113 ~~~~--lG~gll~~~-g~~W~~~Rk~-~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  113 LKPW--LGDGLLFSD-GEKWHKHRKL-LTPAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHH--hcCccccCC-chHHHHHHhh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHH
Confidence            2222  245666665 9999999998 79999999999999999999999888887643 23339999999999999999


Q ss_pred             HHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccc-hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 038171          187 RLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSP-FMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPK  265 (509)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (509)
                      .++||.....  ...+...++.+++..+...+..   ....| +..++..+. ..++.+++.+.++++++++|++++++.
T Consensus       188 ~~~~G~~~~~--~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~a~~~~~~~~~~iI~~rr~~~  261 (497)
T KOG0157|consen  188 KTAMGPESLD--AEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLK-SERKLKKARKILHDFLEKIIRERREEL  261 (497)
T ss_pred             HHhcCCcccc--ccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999932211  1123445666666655544332   23345 444444332 678899999999999999999888654


Q ss_pred             ccccc---cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171          266 RTKAD---MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV  342 (509)
Q Consensus       266 ~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  342 (509)
                      .....   ....|+++.+....+     ..+++++|++++.+|++||+||||++++|++++|+.||++|+++++|+++++
T Consensus       262 ~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~  336 (497)
T KOG0157|consen  262 EKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEIL  336 (497)
T ss_pred             HhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            32211   222677776332222     3799999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc-cCceeCCCCEEEeehhhhcCCCCCCC-CCCCCC
Q 038171          343 GGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII-DGYEIPAKTLVYVNAWAIGRDPEAWE-NPEEFN  420 (509)
Q Consensus       343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~~-dp~~F~  420 (509)
                      +..+...+....++|+|+++||+|||||||++|+ ..|.+.+|+++ +||.||||+.|+++++++|||+.+|+ ||++||
T Consensus       337 ~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  337 GNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             CCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence            8653333333334699999999999999999998 56999999999 58999999999999999999999996 999999


Q ss_pred             CCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEE
Q 038171          421 PERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVL  500 (509)
Q Consensus       421 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (509)
                      ||||+++......++++|+|||+|+|.|+|++||++|+|+++++++++|+|++..+..     ......++++++++++|
T Consensus       416 PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  416 PERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKV  490 (497)
T ss_pred             ccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEE
Confidence            9999976443344678999999999999999999999999999999999999877642     45678999999999999


Q ss_pred             EEeeccc
Q 038171          501 LAKYHEY  507 (509)
Q Consensus       501 ~~~~~~~  507 (509)
                      ++++|..
T Consensus       491 ~~~~r~~  497 (497)
T KOG0157|consen  491 KLRPRGS  497 (497)
T ss_pred             EEEeCCC
Confidence            9999963


No 14 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.2e-77  Score=591.99  Aligned_cols=461  Identities=24%  Similarity=0.391  Sum_probs=359.7

Q ss_pred             hhcccCCCCCCCCCCCCCcccccccCCCC------------------CCCchhHHHHHhhhCCeEEEeecCccEEEecCH
Q 038171           23 RHVTSSYASSLPPGPKGLPFIGNLHQFDS------------------SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSA   84 (509)
Q Consensus        23 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp   84 (509)
                      ++.+....++.||||+++|++||++.+..                  .+....+.+|+++||++|++++|+.++|+|+||
T Consensus        33 ~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp  112 (516)
T PLN02290         33 RRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTET  112 (516)
T ss_pred             HHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCH
Confidence            33344456677999999999999877621                  122235788999999999999999999999999


Q ss_pred             HHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHh
Q 038171           85 KMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKS  164 (509)
Q Consensus        85 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~  164 (509)
                      +++++++.++.. +..++...........|.+ +++.+|+.|+++||. +.+.|+..+++.+.+.+.++++.+++.+.+.
T Consensus       113 ~~v~~il~~~~~-~~~r~~~~~~~~~~~~g~~-l~~~~g~~Wk~~Rk~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~  189 (516)
T PLN02290        113 ELIKELLTKYNT-VTGKSWLQQQGTKHFIGRG-LLMANGADWYHQRHI-AAPAFMGDRLKGYAGHMVECTKQMLQSLQKA  189 (516)
T ss_pred             HHHHHHHhcCCC-CCCCcchhhhHHHHHhcCC-ccccCchHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987633 4444422111111112334 455679999999998 6899999999999999999999999999865


Q ss_pred             hccC-CccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHH
Q 038171          165 AAAS-KQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRL  243 (509)
Q Consensus       165 ~~~~-~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~  243 (509)
                      .+.+ .++|+.+++..+++|+++.++||.+++..       +++...+..+............+|++.+++  ....++.
T Consensus       190 ~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p--~~~~~~~  260 (516)
T PLN02290        190 VESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG-------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP--SKYNREI  260 (516)
T ss_pred             HhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc-------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC--ChhHHHH
Confidence            4433 58999999999999999999999987532       222333333332221111112234433332  1233455


Q ss_pred             HHHHHHHHHHHHHHHHhhcCcccccc-ccCcchHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHH
Q 038171          244 ENNVQESDRFYQELIDEHLDPKRTKA-DMQQEDLVDVLLQIRKHR-GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTM  321 (509)
Q Consensus       244 ~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~-~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l  321 (509)
                      .+..+.+.+++.+.++++++..+.+. .....|+++.++++..+. ..+..++++++.+++.++++||+|||+++++|++
T Consensus       261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l  340 (516)
T PLN02290        261 KSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTL  340 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            66677888888888887765432211 111279999999865432 1123588999999999999999999999999999


Q ss_pred             HHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEe
Q 038171          322 TYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYV  401 (509)
Q Consensus       322 ~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~  401 (509)
                      ++|++||++|+|+++||+++++.+  .++++++++||||+|||+||||++|++|. ++|.+.+|++++||.|||||.|++
T Consensus       341 ~~L~~~P~vq~kl~~Ei~~v~~~~--~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~  417 (516)
T PLN02290        341 MLLASNPTWQDKVRAEVAEVCGGE--TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWI  417 (516)
T ss_pred             HHHhcCHHHHHHHHHHHHHHhCCC--CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEe
Confidence            999999999999999999999763  68999999999999999999999999996 689999999999999999999999


Q ss_pred             ehhhhcCCCCCC-CCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCC
Q 038171          402 NAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQ  480 (509)
Q Consensus       402 ~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~  480 (509)
                      +.+++||||++| +||++||||||++++.   .....++|||+|+|+|+|++||++|++++++.||++|++++.++.+  
T Consensus       418 ~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~--  492 (516)
T PLN02290        418 PVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYR--  492 (516)
T ss_pred             cHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcc--
Confidence            999999999999 8999999999995432   1345799999999999999999999999999999999999876532  


Q ss_pred             cCCCCCCCCceeeeccceEEEEeecc
Q 038171          481 DLDFDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                         .....+++..|++++++++++|.
T Consensus       493 ---~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        493 ---HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             ---cCccceeeecCCCCCeEEEEeCC
Confidence               12234689999999999999985


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.5e-77  Score=578.13  Aligned_cols=458  Identities=27%  Similarity=0.462  Sum_probs=365.8

Q ss_pred             CCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccC
Q 038171           34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYN  113 (509)
Q Consensus        34 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  113 (509)
                      ||||+++|++||++++...+++..+.+|+++||++|++++|++++|+|+||+++++++.++...|..++.......+..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            68999999999999885556889999999999999999999999999999999999999888888777644333222221


Q ss_pred             CcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhc--cCCccchHHHHHHhHHHHHHHHHhc
Q 038171          114 GLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAA--ASKQVNLSEKTMSLSCNTICRLAFG  191 (509)
Q Consensus       114 ~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG  191 (509)
                      +..++++.+|+.|+++||.+..++|+...++.+.+.+++.++.+++.+.+...  .++++|+.+.+..+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            22233444689999999987888999888899999999999999998876543  4578999999999999999999999


Q ss_pred             CCCCCCccchhh-----hhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 038171          192 KRSDGNEEAISG-----RSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKR  266 (509)
Q Consensus       192 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (509)
                      .+.+......-.     ...+...+..+........+.+++|++.+++. ....+...+......+++..+++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  239 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPN-KSFETRVQTTEFRRTAVMKALIKQQKKRIA  239 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            987653211000     12233333333333222233456676655532 122233333344556777788776665433


Q ss_pred             cccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCC
Q 038171          267 TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNK  346 (509)
Q Consensus       267 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~  346 (509)
                      .+.. . .|+++.|++..      ..++++++.++++++++||+|||+++++|++++|++||++|+++++||+++.++. 
T Consensus       240 ~~~~-~-~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-  310 (466)
T PLN02655        240 RGEE-R-DCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDE-  310 (466)
T ss_pred             CCCC-c-ccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCC-
Confidence            2222 2 68999999753      2589999999999999999999999999999999999999999999999999864 


Q ss_pred             CCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCC
Q 038171          347 SFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFID  426 (509)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  426 (509)
                      . +++++++++||++|||+||||++|++|...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++
T Consensus       311 ~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~  389 (466)
T PLN02655        311 R-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLG  389 (466)
T ss_pred             C-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCC
Confidence            3 899999999999999999999999999877899999999999999999999999999999999999999999999997


Q ss_pred             CCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171          427 RSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       427 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                      ++... .....++|||+|+|.|||++||..|++++++.||++|++++.++.. .   .....+++..+++++.+.+++|.
T Consensus       390 ~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        390 EKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-E---KEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             CCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-c---ccchhheeEeecCCcEEEEeecC
Confidence            64321 1346799999999999999999999999999999999999876643 1   23456888999999999999986


Q ss_pred             c
Q 038171          507 Y  507 (509)
Q Consensus       507 ~  507 (509)
                      .
T Consensus       465 ~  465 (466)
T PLN02655        465 S  465 (466)
T ss_pred             C
Confidence            4


No 16 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1.6e-75  Score=572.13  Aligned_cols=472  Identities=24%  Similarity=0.432  Sum_probs=354.4

Q ss_pred             cCCCCCCCCCCCCCcccccccCCCCCCCc-hhHHHHHhhh-CCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCch
Q 038171           27 SSYASSLPPGPKGLPFIGNLHQFDSSKPH-VSFWELSKKY-GPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPAS  104 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~-~~~~~~~~ky-G~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~  104 (509)
                      +....+.||||+++|++||++.+....+. .++.++.++| |+||++++|++++|+|+||+.+++++.++...|..++..
T Consensus        35 ~~~~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~  114 (534)
T PLN03018         35 KDRSRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQL  114 (534)
T ss_pred             CCCCCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCc
Confidence            33445689999999999999887433333 3466666666 799999999999999999999999999888888888754


Q ss_pred             hhhhccccCCcceEecCCchhHHHHHHHHHHhh-cchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHH
Q 038171          105 VATQRLTYNGLDLIFSPYGEYWREIRKICVVHL-FNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCN  183 (509)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~-f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~  183 (509)
                      ........++.+++++.+|+.|+++||. +++. ++......+.+..+.+++++++.+.+..+.+.++|+.+.+..+++|
T Consensus       115 ~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~  193 (534)
T PLN03018        115 SIMETIGDNYKSMGTSPYGEQFMKMKKV-ITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYA  193 (534)
T ss_pred             hhhhhhccCCCceEecCCCHHHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHH
Confidence            4433222222346666679999999999 4555 4555555566666677899999997654456689999999999999


Q ss_pred             HHHHHHhcCCCCCCccc----hhhhhHHHHHHHHHHHhhhhh---ccccccc-hhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 038171          184 TICRLAFGKRSDGNEEA----ISGRSRFHTLLSEIQALSIAF---FVTDYSP-FMGWIDKLTGMMRRLENNVQESDRFYQ  255 (509)
Q Consensus       184 vi~~~~fG~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~  255 (509)
                      ++++++||.++...+..    ......+.............+   ...+.+| ++.++. +....++.......+.+++.
T Consensus       194 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~  272 (534)
T PLN03018        194 VTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWN-IDGQEERAKVNVNLVRSYNN  272 (534)
T ss_pred             HHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhc-ccchHHHHHHHHHHHHHHHH
Confidence            99999999987542210    001111222222222211111   1112222 222110 11223345555667788888


Q ss_pred             HHHHhhcCcccc-ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHH
Q 038171          256 ELIDEHLDPKRT-KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKV  334 (509)
Q Consensus       256 ~~i~~~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l  334 (509)
                      ++++++++..+. .......|+++.|++..++.+ ...++++++++++.++++||+|||+++++|++++|+.||++|+++
T Consensus       273 ~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl  351 (534)
T PLN03018        273 PIIDERVELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKA  351 (534)
T ss_pred             HHHHHHHHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence            888877653221 111112689999998754332 114899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCC
Q 038171          335 QEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWE  414 (509)
Q Consensus       335 ~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~  414 (509)
                      ++||+++++.+ +.++.+++.++||++|||+||||++|++|...+|.+.+|++++||.||||+.|+++.+++||||++|+
T Consensus       352 ~~Ei~~v~~~~-~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~  430 (534)
T PLN03018        352 LKELDEVVGKD-RLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWK  430 (534)
T ss_pred             HHHHHHHhCCC-CCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCC
Confidence            99999999764 67899999999999999999999999999877899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcCCCCCCCC-----CCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCC
Q 038171          415 NPEEFNPERFIDRSVDF-----KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSG  489 (509)
Q Consensus       415 dp~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  489 (509)
                      ||++|+||||++++...     ......++|||+|+|+|+|++||.+|+++++++|+++|++++.++..  ++++....+
T Consensus       431 ~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~  508 (534)
T PLN03018        431 DPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFG--PLSLEEDDA  508 (534)
T ss_pred             CccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCC--CCCcccccc
Confidence            99999999999754211     12456799999999999999999999999999999999999876532  233333345


Q ss_pred             ceeeeccceEEEEeec
Q 038171          490 ITVHKKNFLVLLAKYH  505 (509)
Q Consensus       490 ~~~~~~~~~~~~~~~~  505 (509)
                      .+.. ++++.+++++|
T Consensus       509 ~~~~-p~~~~v~~~~R  523 (534)
T PLN03018        509 SLLM-AKPLLLSVEPR  523 (534)
T ss_pred             ceec-CCCeEEEEEec
Confidence            5554 46999999999


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.1e-75  Score=573.79  Aligned_cols=440  Identities=17%  Similarity=0.316  Sum_probs=335.7

Q ss_pred             cCCCCCCCCCCCCCcccccccCCCC----CCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCC
Q 038171           27 SSYASSLPPGPKGLPFIGNLHQFDS----SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRP  102 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~~G~~~~~~~----~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~  102 (509)
                      .+++.+.||||+++|++||++.+..    ++++..+.+++++||++|++++|++++|+|+||+++++++.+++..|..+.
T Consensus        33 ~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~  112 (490)
T PLN02500         33 KQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSY  112 (490)
T ss_pred             ccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeC
Confidence            3455678999999999999865421    345677899999999999999999999999999999999998776665332


Q ss_pred             chhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhc-cccchHHHHHHHHHHHHHhhccCCccchHHHHHHhH
Q 038171          103 ASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLS  181 (509)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~  181 (509)
                      ...... . . |...++..+|+.|+++||. +.+.|++..++. +.+.+.+.+..+++.|.    .++++|+.+.+..++
T Consensus       113 ~~~~~~-~-~-g~~~~~~~~g~~wr~~Rk~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~~  184 (490)
T PLN02500        113 PRSIGG-I-L-GKWSMLVLVGDMHRDMRSI-SLNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKFT  184 (490)
T ss_pred             chHHHH-H-h-CcccccccCCHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHHH
Confidence            211111 1 1 2223444579999999998 578899888876 45666666666666653    345799999999999


Q ss_pred             HHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 038171          182 CNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH  261 (509)
Q Consensus       182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (509)
                      +|++++++||.+.+..     ....+...+.........  ....+|..        ..++..++.+.+.+++.+.++++
T Consensus       185 ~~vi~~~~fg~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~~  249 (490)
T PLN02500        185 FNLMAKHIMSMDPGEE-----ETEQLKKEYVTFMKGVVS--APLNFPGT--------AYRKALKSRATILKFIERKMEER  249 (490)
T ss_pred             HHHHHHHHhCCCCCch-----HHHHHHHHHHHHHhhhhc--chhcCCCc--------ccHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999875431     122222222222221111  11112221        12334456677888888888776


Q ss_pred             cCcccccc-ccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171          262 LDPKRTKA-DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS  340 (509)
Q Consensus       262 ~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~  340 (509)
                      +++.+.+. .....|+++.+++.       ..++++++++++.++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       250 ~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~  322 (490)
T PLN02500        250 IEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLE  322 (490)
T ss_pred             HHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence            65432211 11126899999873       25899999999999999999999999999999999999999999999999


Q ss_pred             hhCC----CCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCC
Q 038171          341 LVGG----NKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENP  416 (509)
Q Consensus       341 ~~~~----~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp  416 (509)
                      +.+.    .++.++++++++|||++|||+||||+||++|. ++|.+.+|++++||.|||||.|+++.|++||||++|+||
T Consensus       323 v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP  401 (490)
T PLN02500        323 IARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQP  401 (490)
T ss_pred             HhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-eeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCc
Confidence            8742    22458999999999999999999999999998 579999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCCCCC------CCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCc
Q 038171          417 EEFNPERFIDRSVDFK------GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGI  490 (509)
Q Consensus       417 ~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  490 (509)
                      ++||||||++++....      ..++.++|||+|+|+|+|++||++|+++++++||++|+|++.++..  ..   . ...
T Consensus       402 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~--~~---~-~~~  475 (490)
T PLN02500        402 QLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQ--AF---A-FPF  475 (490)
T ss_pred             cccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCc--ce---e-ccc
Confidence            9999999997543211      1356799999999999999999999999999999999999876542  11   1 112


Q ss_pred             eeeeccceEEEEee
Q 038171          491 TVHKKNFLVLLAKY  504 (509)
Q Consensus       491 ~~~~~~~~~~~~~~  504 (509)
                      + .+.+++.|++++
T Consensus       476 ~-~~~~~l~~~~~~  488 (490)
T PLN02500        476 V-DFPKGLPIRVRR  488 (490)
T ss_pred             c-cCCCCceEEEEe
Confidence            2 334699988875


No 18 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.5e-75  Score=530.74  Aligned_cols=455  Identities=24%  Similarity=0.403  Sum_probs=381.6

Q ss_pred             CCCCCCCCCcccccccCC---CCCCCchhHHHHHhhhCCeEEEe-ecCccEEEecCHHHHHHHHHhCCccccCCC-chhh
Q 038171           32 SLPPGPKGLPFIGNLHQF---DSSKPHVSFWELSKKYGPLMSLR-IGFVPTLIVSSAKMAKETLKAHDLQFSGRP-ASVA  106 (509)
Q Consensus        32 ~~ppgp~~~p~~G~~~~~---~~~~~~~~~~~~~~kyG~v~~i~-~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~-~~~~  106 (509)
                      ...|||+++|++|.++.+   ...+.|+.....+++|||||+.. +|++..|.|.||+.++.++++++. ++-|+ ....
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccch
Confidence            455899999999998843   24567888999999999999999 888999999999999999997653 35554 2222


Q ss_pred             hh--ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhc---cCCccchHHHHHHhH
Q 038171          107 TQ--RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAA---ASKQVNLSEKTMSLS  181 (509)
Q Consensus       107 ~~--~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vd~~~~~~~~~  181 (509)
                      +.  ...+++..++++.+|+.|.+.|..+...+++++.++.|.+.+++.+++++..+....+   +..+.|+.+.+.+++
T Consensus       129 w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~ws  208 (519)
T KOG0159|consen  129 WVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWS  208 (519)
T ss_pred             hhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHH
Confidence            11  2234466678888899999999998888899999999999999999999999988765   335899999999999


Q ss_pred             HHHHHHHHhcCCCCCCcc-chhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 038171          182 CNTICRLAFGKRSDGNEE-AISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDE  260 (509)
Q Consensus       182 ~~vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  260 (509)
                      ++.||.++||.++++++. .++..+.+.++++.++.....+..  ..++++++.  ++.++++.++.+.+.++..+.|++
T Consensus       209 lEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~--~p~l~r~~~--t~~wk~~~~~~D~i~~~~~~~Id~  284 (519)
T KOG0159|consen  209 LESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLML--MPSLWRYFP--TKVWKDFVRAWDQIFDVGDKYIDN  284 (519)
T ss_pred             HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHh--cchHHHhCC--ChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999765 335667777777777765443222  113333332  578889999999999999999988


Q ss_pred             hcCccccccc---cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHH
Q 038171          261 HLDPKRTKAD---MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE  337 (509)
Q Consensus       261 ~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~E  337 (509)
                      ..++.+....   .....++..|.+        .+++.+++..++++++.||.||||+|+.|+||+|++||++|++|++|
T Consensus       285 ~l~~l~~~~~~~~~~~~~l~~~L~~--------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~E  356 (519)
T KOG0159|consen  285 ALEELEKQDSAGSEYTGSLLELLLR--------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREE  356 (519)
T ss_pred             HHHHHHhccccccchhHHHHHHHHH--------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHH
Confidence            8776544222   111233333333        26899999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCC
Q 038171          338 IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPE  417 (509)
Q Consensus       338 i~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~  417 (509)
                      +.++.+..++.++.+++.++|||+||||||+||||.+|++ .|...+|.+++||.|||||.|.++++...+||.+|++|+
T Consensus       357 i~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~  435 (519)
T KOG0159|consen  357 ILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPE  435 (519)
T ss_pred             HHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCCcc
Confidence            9999998668899999999999999999999999999985 599999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccc
Q 038171          418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNF  497 (509)
Q Consensus       418 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (509)
                      +|+|||||+++. ...+++.++|||.|+|+|+|++||++|+-++||.|+++|+++..++.     ++.....+++.|..+
T Consensus       436 ~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~-----pv~~~~~~il~P~~~  509 (519)
T KOG0159|consen  436 EFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE-----PVEYVYRFILVPNRP  509 (519)
T ss_pred             ccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC-----CccceeEEEEcCCCC
Confidence            999999999874 23478999999999999999999999999999999999999987652     356778899999999


Q ss_pred             eEEEEeecc
Q 038171          498 LVLLAKYHE  506 (509)
Q Consensus       498 ~~~~~~~~~  506 (509)
                      +.+++++|.
T Consensus       510 l~f~f~~r~  518 (519)
T KOG0159|consen  510 LRFKFRPRN  518 (519)
T ss_pred             cceeeeeCC
Confidence            999999985


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=9.1e-75  Score=565.04  Aligned_cols=450  Identities=19%  Similarity=0.359  Sum_probs=342.4

Q ss_pred             CCCCCCCCcccccccCCCCCCCchhHHHHHh----hhCCeEE---EeecCccEEEecCHHHHHHHHHhCCccccCCCchh
Q 038171           33 LPPGPKGLPFIGNLHQFDSSKPHVSFWELSK----KYGPLMS---LRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV  105 (509)
Q Consensus        33 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~----kyG~v~~---i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~  105 (509)
                      ..|||+++|++||+..+... ... +.++..    +||..++   .++|+.++|+|+||+.+++|+.++...|.+++...
T Consensus        32 ~~p~p~~~pl~G~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~  109 (500)
T PLN02169         32 GQPILKNWPFLGMLPGMLHQ-IPR-IYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFK  109 (500)
T ss_pred             CCCCCCCCCcccchHHHHHc-cCc-HHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHH
Confidence            35788899999999776332 222 444444    4887665   57899999999999999999998766666654322


Q ss_pred             hhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhc--cccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHH
Q 038171          106 ATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQN--FRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCN  183 (509)
Q Consensus       106 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~  183 (509)
                      ...  ...|.+ +++.+|+.|+++||. +.+.|+...+..  +.+.+.+.++.+++.+.+...++.++|+.+.+.++++|
T Consensus       110 ~~~--~~~g~g-l~~~~g~~Wr~~Rk~-l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~d  185 (500)
T PLN02169        110 KIF--DVLGEG-ILTVDFELWEDLRKS-NHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFD  185 (500)
T ss_pred             HHH--HhhcCc-ccccCcHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHH
Confidence            211  122444 445579999999999 689999887654  23666677888888887665567789999999999999


Q ss_pred             HHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhh-h-hhh-hhHHHHHHHHHHHHHHHHHHHHHh
Q 038171          184 TICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGW-I-DKL-TGMMRRLENNVQESDRFYQELIDE  260 (509)
Q Consensus       184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~  260 (509)
                      +|+.++||.+.+..+.. .....+.+.+.......   ......|++.+ + .++ .+..++..++.+.+.+++.++|++
T Consensus       186 vi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~  261 (500)
T PLN02169        186 TSSILMTGYDPMSLSIE-MLEVEFGEAADIGEEAI---YYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISS  261 (500)
T ss_pred             HHHhheeCCCccccCCC-CCCCHHHHHHHHHHHHH---HhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999987643211 11234554444433221   11223343322 1 122 234567788888999999999988


Q ss_pred             hcCcccc--ccccCcchHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHH
Q 038171          261 HLDPKRT--KADMQQEDLVDVLLQIRKHRG-FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE  337 (509)
Q Consensus       261 ~~~~~~~--~~~~~~~d~l~~ll~~~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~E  337 (509)
                      +++...+  +.+...+|+++.++++..+.. ....++++++.+++.++++||+||||++++|++++|+.||++|+|+++|
T Consensus       262 r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~E  341 (500)
T PLN02169        262 RRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHE  341 (500)
T ss_pred             HHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            7653211  111112689999997643211 0124788999999999999999999999999999999999999999999


Q ss_pred             HHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCC-ccccCceeCCCCEEEeehhhhcCCCCCC-CC
Q 038171          338 IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEK-SIIDGYEIPAKTLVYVNAWAIGRDPEAW-EN  415 (509)
Q Consensus       338 i~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~-~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~d  415 (509)
                      |++++       +.+++.+||||+|||+||||+||++|... |.+.+| +.++|+.||||+.|++++|++||||++| +|
T Consensus       342 i~~v~-------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~d  413 (500)
T PLN02169        342 INTKF-------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGED  413 (500)
T ss_pred             HHhhC-------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCC
Confidence            99863       57899999999999999999999999865 665555 5569999999999999999999999999 89


Q ss_pred             CCCCCCCcCCCCCCCCC-CCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeee
Q 038171          416 PEEFNPERFIDRSVDFK-GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHK  494 (509)
Q Consensus       416 p~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  494 (509)
                      |++||||||++++.... .+++.|+|||+|+|+|+|++||++|+++++++||++|++++.++.   +  +....+++++|
T Consensus       414 P~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~--~~~~~~~~l~~  488 (500)
T PLN02169        414 ALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---K--IEAIPSILLRM  488 (500)
T ss_pred             hhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---C--cccccceEEec
Confidence            99999999997644322 246789999999999999999999999999999999999987543   2  23356789999


Q ss_pred             ccceEEEEeec
Q 038171          495 KNFLVLLAKYH  505 (509)
Q Consensus       495 ~~~~~~~~~~~  505 (509)
                      ++++.+++++|
T Consensus       489 ~~gl~l~l~~~  499 (500)
T PLN02169        489 KHGLKVTVTKK  499 (500)
T ss_pred             CCCEEEEEEeC
Confidence            99999999987


No 20 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.9e-75  Score=566.07  Aligned_cols=433  Identities=22%  Similarity=0.327  Sum_probs=340.5

Q ss_pred             CCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171           28 SYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT  107 (509)
Q Consensus        28 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (509)
                      +.+++.||||+++|++||++.+ .+++..++++++++||++|++++|++++++++||+.+++++.++...|..+......
T Consensus        27 ~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~  105 (463)
T PLN02774         27 YSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML  105 (463)
T ss_pred             cCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH
Confidence            4556788999999999999887 556778899999999999999999999999999999999998776655332211111


Q ss_pred             hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhc-cccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHH
Q 038171          108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQN-FRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTIC  186 (509)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~  186 (509)
                       .. + |.+++++.+|+.|+++|+. +.+.|++..++. +.+.+.+.+++++++|.    .++++|+.+.+..+++++++
T Consensus       106 -~~-l-g~~~~~~~~g~~w~~~R~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~  177 (463)
T PLN02774        106 -DI-L-GTCNIAAVHGSTHRYMRGS-LLSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSAL  177 (463)
T ss_pred             -HH-h-CccchhhcCCHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHH
Confidence             11 2 3334556689999999998 578999988875 67888888888877764    34679999999999999999


Q ss_pred             HHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccc
Q 038171          187 RLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKR  266 (509)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (509)
                      .++||.+.+.      ....+.+.+..+..  ........+|.        ...++..++.+.+.+++.+.++++.++. 
T Consensus       178 ~~~~g~~~~~------~~~~~~~~~~~~~~--~~~~~~~~lp~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-  240 (463)
T PLN02774        178 KQIAGTLSKP------ISEEFKTEFFKLVL--GTLSLPIDLPG--------TNYRSGVQARKNIVRMLRQLIQERRASG-  240 (463)
T ss_pred             HHHcCCCChH------HHHHHHHHHHHHhc--ccccCCcCCCC--------hhhhHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            9999976432      11222222221111  01111111221        1234455677788888888888876532 


Q ss_pred             cccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCC-
Q 038171          267 TKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGN-  345 (509)
Q Consensus       267 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~-  345 (509)
                        ..  .+|+++.|++...+   ...++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+.. 
T Consensus       241 --~~--~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~  313 (463)
T PLN02774        241 --ET--HTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR  313 (463)
T ss_pred             --CC--cccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC
Confidence              11  27999999974322   23589999999999999999999999999999999999999999999999998642 


Q ss_pred             -CCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcC
Q 038171          346 -KSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF  424 (509)
Q Consensus       346 -~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~  424 (509)
                       ++.+++++++++||++|||+||||++|+++. .+|.+.+|++++||.||||+.|+++++++||||++|+||++|+||||
T Consensus       314 ~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRf  392 (463)
T PLN02774        314 PEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRW  392 (463)
T ss_pred             CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-cccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhc
Confidence             3568999999999999999999999999996 56999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171          425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY  504 (509)
Q Consensus       425 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (509)
                      ++++..   ....++|||+|+|+|||++||++|++++++.||++|+|++.++...     .  ...+..|++++.|+++|
T Consensus       393 l~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~-----~--~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        393 LDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKL-----M--KFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             CCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcc-----c--cCCCCCCCCCceEEeee
Confidence            975421   1235899999999999999999999999999999999998765321     1  12244478999999885


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=2.3e-74  Score=568.09  Aligned_cols=456  Identities=22%  Similarity=0.370  Sum_probs=344.5

Q ss_pred             CCCCCCCcccccccCCCCCCCchhHHHHHhhh---CCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc
Q 038171           34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKKY---GPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL  110 (509)
Q Consensus        34 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky---G~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  110 (509)
                      +|||+++|++||++.+. . .+..+.+|.++|   |++|++++|+.+.++++||+.+++|+.++...|...+........
T Consensus        32 ~pgp~~~p~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~  109 (516)
T PLN03195         32 RKGPKSWPIIGAALEQL-K-NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV  109 (516)
T ss_pred             cCCCCCCCeecchHHHH-h-ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence            68999999999987663 2 245577888888   899999999999999999999999998764555444322111111


Q ss_pred             ccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccch-HHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHH
Q 038171          111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIR-EDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLA  189 (509)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  189 (509)
                       ..+. ++++.+|+.|+++||. +++.|+..+++.+.+.+ .+.++.+++.+.+...+++++|+.+++..+++|+++.++
T Consensus       110 -~~g~-~l~~~~g~~w~~~Rr~-l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~  186 (516)
T PLN03195        110 -LLGD-GIFNVDGELWRKQRKT-ASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKVG  186 (516)
T ss_pred             -HhcC-eeeccCcHHHHHHHHh-cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHHH
Confidence             1233 3566789999999998 78999999999998875 666778888776544456789999999999999999999


Q ss_pred             hcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhh-hhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171          190 FGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKL-TGMMRRLENNVQESDRFYQELIDEHLDPKRTK  268 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  268 (509)
                      ||.+++..+... ....+.+.+.........   ....|++.....+ ....+...+..+.+.+++.+.+++++++...+
T Consensus       187 fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  262 (516)
T PLN03195        187 FGVEIGTLSPSL-PENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEA  262 (516)
T ss_pred             hCCCccccccCC-CccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999887643111 112344444333221111   0111221111111 11233445667778888888887766442211


Q ss_pred             ---cccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCC
Q 038171          269 ---ADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGN  345 (509)
Q Consensus       269 ---~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  345 (509)
                         ......|+++.|+++.++.  +..++++++.++++++++||+|||+++++|++++|+.||++|+||++||+++++..
T Consensus       263 ~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  340 (516)
T PLN03195        263 RKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKER  340 (516)
T ss_pred             ccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc
Confidence               1111268999999764332  23689999999999999999999999999999999999999999999999987531


Q ss_pred             -------------------CCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCcc-ccCceeCCCCEEEeehhh
Q 038171          346 -------------------KSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSI-IDGYEIPAKTLVYVNAWA  405 (509)
Q Consensus       346 -------------------~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-~~g~~ip~g~~v~~~~~~  405 (509)
                                         .+.++++++.+||||+|||+||||++|++|.. +|.+.+|.+ ++|+.|||||.|++++++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~  419 (516)
T PLN03195        341 AKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYS  419 (516)
T ss_pred             cccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHh
Confidence                               24588999999999999999999999999986 466666655 599999999999999999


Q ss_pred             hcCCCCCC-CCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCC
Q 038171          406 IGRDPEAW-ENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDF  484 (509)
Q Consensus       406 ~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~  484 (509)
                      +||||++| +||++|+||||++++......++.++|||+|+|+|+|++||++|++++++.|+++|++++.++.   +  .
T Consensus       420 ~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~  494 (516)
T PLN03195        420 MGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---P--V  494 (516)
T ss_pred             hccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---c--c
Confidence            99999999 9999999999996432112245679999999999999999999999999999999999986543   2  2


Q ss_pred             CCCCCceeeeccceEEEEeecc
Q 038171          485 DSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                      ......+..|++++.|++++|.
T Consensus       495 ~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        495 KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             eeeeeeEEecCCCEEEEEEeCC
Confidence            2334567889999999999884


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.1e-73  Score=561.41  Aligned_cols=443  Identities=23%  Similarity=0.409  Sum_probs=337.7

Q ss_pred             ccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCc
Q 038171           44 GNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYG  123 (509)
Q Consensus        44 G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  123 (509)
                      ||+..+..+..+..+.+||++|||||++++|+.++++|+||+.+++|+.++...|..++........  .+.+ +++.+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~-l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKG-LIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCc-eecCCc
Confidence            3333443456678899999999999999999999999999999999999776666655432211111  2333 456679


Q ss_pred             hhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCccchhh
Q 038171          124 EYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISG  203 (509)
Q Consensus       124 ~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~  203 (509)
                      +.|+++|+. +.+.|+...+..+.+.+.++++++++.+.+...+++++|+...+..+++|+|+.++||.+++..+.    
T Consensus       220 e~wr~rRr~-l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~----  294 (633)
T PLN02738        220 EIWRVRRRA-IVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSN----  294 (633)
T ss_pred             HHHHHHHHh-ccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCcccccc----
Confidence            999999998 789999999999999999999999999987666778999999999999999999999999875431    


Q ss_pred             hhHHHHHHHHHHHhhhhhccccccchhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC-------ccccc-cccCcc
Q 038171          204 RSRFHTLLSEIQALSIAFFVTDYSPFMGW-IDKLTGMMRRLENNVQESDRFYQELIDEHLD-------PKRTK-ADMQQE  274 (509)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~-~~~~~~  274 (509)
                      .+.+.+.+..............+.+|... +..+....++..+..+.+.++...+++.+++       ..... ......
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  374 (633)
T PLN02738        295 DTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP  374 (633)
T ss_pred             chHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc
Confidence            12233332222221111111111112111 1111122233444444444555444443221       10000 011226


Q ss_pred             hHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhh
Q 038171          275 DLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV  354 (509)
Q Consensus       275 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~  354 (509)
                      |+++.|++..      ..++++++.++++.+++||+||||++++|++++|++||++|+||++||++++++  +.++++++
T Consensus       375 dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~--~~~t~edL  446 (633)
T PLN02738        375 SILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD--RFPTIEDM  446 (633)
T ss_pred             hHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC--CCCCHHHH
Confidence            8999998641      258999999999999999999999999999999999999999999999999874  56899999


Q ss_pred             ccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCC--CCC
Q 038171          355 QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSV--DFK  432 (509)
Q Consensus       355 ~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~--~~~  432 (509)
                      ++||||+|||+|+||+||++|. .+|.+.+|++++||.||+||.|+++.|.+||||++||||++|+||||+.+..  ...
T Consensus       447 ~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~  525 (633)
T PLN02738        447 KKLKYTTRVINESLRLYPQPPV-LIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNET  525 (633)
T ss_pred             ccCHHHHHHHHHHHhcCCCccc-cceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCcccc
Confidence            9999999999999999999998 4588999999999999999999999999999999999999999999985321  112


Q ss_pred             CCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeeccc
Q 038171          433 GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEY  507 (509)
Q Consensus       433 ~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (509)
                      .....++|||.|+|+|+|++||++|+++++|.|+++|+|++.++..  +  .....+.+..+++++++++++|+-
T Consensus       526 ~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        526 NQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEEEEECCC
Confidence            2456799999999999999999999999999999999999876542  2  223346788899999999999864


No 23 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=6.5e-75  Score=571.66  Aligned_cols=455  Identities=34%  Similarity=0.605  Sum_probs=363.7

Q ss_pred             CCCCCCCcccccccCCC-CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhc--c
Q 038171           34 PPGPKGLPFIGNLHQFD-SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQR--L  110 (509)
Q Consensus        34 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~--~  110 (509)
                      ||||+++|++||++.+. .++++.++.+++++||+||++++++.++++|+||+.+++|+.++...+..++.......  .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999984 26778889999999999999999999999999999999999988766665433222221  1


Q ss_pred             ccCCcceEecCCchhHHHHHHHHHHhhcchh-hhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHH
Q 038171          111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSI-RAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLA  189 (509)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  189 (509)
                      ...+ ..++..+|+.|+.+|+. +.+.|+.. .+ .+.+.+++.++.+++.+......+.++|+.+++..+++|+++.++
T Consensus        81 ~~~~-~~l~~~~~~~~~~~R~~-~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~  157 (463)
T PF00067_consen   81 PFGG-KGLFFSDGERWRRQRRL-LAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL  157 (463)
T ss_dssp             HHTT-TSSTTSSHHHHHHHHHH-HHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred             cccc-ccccccccccccccccc-ccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence            1223 34555568999999998 67777777 66 899999999999999999876666689999999999999999999


Q ss_pred             hcCCCCCCccchhhhhHHHHHHHHHHHhhhh--hccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 038171          190 FGKRSDGNEEAISGRSRFHTLLSEIQALSIA--FFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRT  267 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (509)
                      ||.+++..+  ......+.+.+..+...+..  ......+|++.++.  ....+...++.+.+.+++...+++++++...
T Consensus       158 fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  158 FGKDFGSLD--DEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP--TPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             HSSHHHGTT--HHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             ccceeeecc--cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccc
Confidence            999876432  11234555666665543322  12333455444332  2455667777788899999999988877655


Q ss_pred             ccccCcchHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCC
Q 038171          268 KADMQQEDLVDVLLQIR-KHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNK  346 (509)
Q Consensus       268 ~~~~~~~d~l~~ll~~~-~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~  346 (509)
                      +... ..|+++.++++. +..+ +..++++++..+++.+++||+|||+.+++|++++|++||++|++|++||+++.+.. 
T Consensus       234 ~~~~-~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-  310 (463)
T PF00067_consen  234 GDES-RRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDG-  310 (463)
T ss_dssp             SSSS-CSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTS-
T ss_pred             cccc-ccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence            4122 289999999997 2222 14799999999999999999999999999999999999999999999999999544 


Q ss_pred             CCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCC
Q 038171          347 SFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFID  426 (509)
Q Consensus       347 ~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~  426 (509)
                      +.++.++++++|||+|||+||||++|+++..++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+|+||++
T Consensus       311 ~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~  390 (463)
T PF00067_consen  311 REITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLD  390 (463)
T ss_dssp             SSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            57899999999999999999999999999668899999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEE
Q 038171          427 RSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL  501 (509)
Q Consensus       427 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (509)
                      .+.........++|||.|+|+|||++||++|+++++|+||++|++++.++....+  .....+++.+|+ +++|.
T Consensus       391 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~  462 (463)
T PF00067_consen  391 ERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEP--QEQQNGFLLPPK-PLKVK  462 (463)
T ss_dssp             TTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGE--EECSCSSSEEES-SSEEE
T ss_pred             cccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCC--ccccCceEeeCC-CcEEe
Confidence            8753234677899999999999999999999999999999999999977644221  122224555444 66554


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=3.1e-73  Score=551.38  Aligned_cols=431  Identities=23%  Similarity=0.371  Sum_probs=344.4

Q ss_pred             ccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh
Q 038171           26 TSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV  105 (509)
Q Consensus        26 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~  105 (509)
                      ......+.||||+++|++||++.+...+++.++.+++++||++++++++++++|+|+||+.+++++.++...|.  +...
T Consensus        29 ~~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~  106 (463)
T PLN02196         29 SSSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFP  106 (463)
T ss_pred             CCCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCc
Confidence            33445678899999999999887656788999999999999999999999999999999999999987766663  2222


Q ss_pred             hhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHH
Q 038171          106 ATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTI  185 (509)
Q Consensus       106 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi  185 (509)
                      ....... |..++++.+|+.|+++||+ +.+.|+++.++.+.+.++++++++++.|.     ++++++.+++..++++++
T Consensus       107 ~~~~~~~-g~~~l~~~~g~~w~~~Rk~-l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~  179 (463)
T PLN02196        107 ASKERML-GKQAIFFHQGDYHAKLRKL-VLRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVA  179 (463)
T ss_pred             hHHHHHc-CcccccccCcHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHH
Confidence            1111112 3345566689999999999 67899999999999999999999988773     457999999999999999


Q ss_pred             HHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 038171          186 CRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPK  265 (509)
Q Consensus       186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (509)
                      +.++||.+...      ....+.+....+....      ..+|+.  ++  ....++..++.+.+.+++.+.+++++++.
T Consensus       180 ~~~~fG~~~~~------~~~~~~~~~~~~~~~~------~~~~~~--~p--~~~~~~~~~a~~~~~~~~~~~i~~~~~~~  243 (463)
T PLN02196        180 LLSIFGKDEVL------YREDLKRCYYILEKGY------NSMPIN--LP--GTLFHKSMKARKELAQILAKILSKRRQNG  243 (463)
T ss_pred             HHHHcCCCCch------HHHHHHHHHHHHhcch------hccccc--CC--CccchHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999987532      1122222222111111      112211  11  01124455677788888888888776532


Q ss_pred             ccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCC
Q 038171          266 RTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGN  345 (509)
Q Consensus       266 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~  345 (509)
                      .   + . .|+++.+++.   +   ..++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+..
T Consensus       244 ~---~-~-~d~l~~ll~~---~---~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~  312 (463)
T PLN02196        244 S---S-H-NDLLGSFMGD---K---EGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDK  312 (463)
T ss_pred             C---C-c-ccHHHHHHhc---C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc
Confidence            1   1 1 7899988852   1   3689999999999999999999999999999999999999999999999988642


Q ss_pred             --CCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCc
Q 038171          346 --KSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER  423 (509)
Q Consensus       346 --~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R  423 (509)
                        ++.+++++++++||++|||+||||++|++|+. .|.+.+|++++||.|||||.|+++++++||||++|+||++|+|||
T Consensus       313 ~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeR  391 (463)
T PLN02196        313 EEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSR  391 (463)
T ss_pred             ccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhh
Confidence              35689999999999999999999999999985 499999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEe
Q 038171          424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAK  503 (509)
Q Consensus       424 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (509)
                      |+++.     .+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++..  +    .....+..|++++.|+++
T Consensus       392 fl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~--~----~~~~~~~~p~~~~~~~~~  460 (463)
T PLN02196        392 FEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSN--G----IQYGPFALPQNGLPIALS  460 (463)
T ss_pred             hcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCC--c----eEEcccccCCCCceEEEe
Confidence            99642     346799999999999999999999999999999999999866421  1    223445668899888876


Q ss_pred             e
Q 038171          504 Y  504 (509)
Q Consensus       504 ~  504 (509)
                      .
T Consensus       461 ~  461 (463)
T PLN02196        461 R  461 (463)
T ss_pred             c
Confidence            4


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=3.1e-72  Score=543.79  Aligned_cols=437  Identities=22%  Similarity=0.314  Sum_probs=340.5

Q ss_pred             CCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc
Q 038171           28 SYASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA  103 (509)
Q Consensus        28 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~  103 (509)
                      .++++.||||.++|++||++.+.    ..+++.++.+|+++||+||++++|+.++|+++||+++++++.+++..|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            35677899999999999998763    24678889999999999999999999999999999999999988777765432


Q ss_pred             hhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhcc-ccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHH
Q 038171          104 SVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNF-RPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSC  182 (509)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~  182 (509)
                      . ..... . |.+.++..+|+.|+++|++ +.+.|+...+... .+.+.+.++++++.+    .++.++++.+.+..+++
T Consensus        83 ~-~~~~l-~-g~~~~~~~~g~~wr~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         83 K-SLTEL-M-GKSSILLINGSLQRRVHGL-IGAFLKSPHLKAQITRDMERYVSESLDSW----RDDPPVLVQDETKKIAF  154 (452)
T ss_pred             h-hHHHH-h-CcccccccCcHHHHHHHHH-HHHhcCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCEEhHHHHHHHHH
Confidence            1 11111 1 3344566689999999998 6778877666542 445555555555544    24568999999999999


Q ss_pred             HHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171          183 NTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHL  262 (509)
Q Consensus       183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (509)
                      ++++.++||.+.+.      ....+...+..+......  +...+|..        ..++..++.+.+.+++.+++++++
T Consensus       155 ~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~~~~  218 (452)
T PLN03141        155 EVLVKALISLEPGE------EMEFLKKEFQEFIKGLMS--LPIKLPGT--------RLYRSLQAKKRMVKLVKKIIEEKR  218 (452)
T ss_pred             HHHHHHHcCCCchH------HHHHHHHHHHHHhhhHHh--CccCCCch--------HhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999976532      122222233322221111  11112211        122344567788888888888776


Q ss_pred             Cccccccc---cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHH
Q 038171          263 DPKRTKAD---MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIR  339 (509)
Q Consensus       263 ~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~  339 (509)
                      +....+.+   ....|+++.++++..     ..+++++++++++++++||+|||+++++|++++|++||++|+++++|++
T Consensus       219 ~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~  293 (452)
T PLN03141        219 RAMKNKEEDETGIPKDVVDVLLRDGS-----DELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENM  293 (452)
T ss_pred             HHHhccCccccCChhhHHHHHHhcCC-----CCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence            54322111   012689999987531     3589999999999999999999999999999999999999999999999


Q ss_pred             HhhC---CCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCC
Q 038171          340 SLVG---GNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENP  416 (509)
Q Consensus       340 ~~~~---~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp  416 (509)
                      ++.+   ..++.++.+++.++||++|||+|+||+||+++. ++|.+.+|++++||.||||+.|+++++++||||++|+||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP  372 (452)
T PLN03141        294 KLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNP  372 (452)
T ss_pred             HHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCc
Confidence            8864   223458899999999999999999999999985 679999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeecc
Q 038171          417 EEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKN  496 (509)
Q Consensus       417 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (509)
                      ++|+||||++++.    .++.++|||+|+|+|+|++||++|+++++|.|+++|+|++.++.   .  .   ...+++|+.
T Consensus       373 ~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~--~---~~~~~~~~~  440 (452)
T PLN03141        373 YQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---I--V---NFPTVRMKR  440 (452)
T ss_pred             cccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---e--e---ecccccCCC
Confidence            9999999997532    35679999999999999999999999999999999999976542   1  1   235889999


Q ss_pred             ceEEEEeecc
Q 038171          497 FLVLLAKYHE  506 (509)
Q Consensus       497 ~~~~~~~~~~  506 (509)
                      ++.|++++|.
T Consensus       441 ~~~~~~~~~~  450 (452)
T PLN03141        441 KLPIWVTRID  450 (452)
T ss_pred             CceEEEEeCC
Confidence            9999999983


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4.6e-71  Score=544.00  Aligned_cols=442  Identities=22%  Similarity=0.346  Sum_probs=344.3

Q ss_pred             cCCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCC--eEEEeecCccEEEecCHHHHHHHHHhCCccccC
Q 038171           27 SSYASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGP--LMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSG  100 (509)
Q Consensus        27 ~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~--v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~  100 (509)
                      +....+.||||+++|++|+++.+.    ..+++.++.+++++||+  +|++++++.+.|+++||+.+++++.++ +.|..
T Consensus        37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~  115 (490)
T PLN02302         37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP  115 (490)
T ss_pred             ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence            445567899999999999988763    34678889999999997  799999999999999999999999865 34443


Q ss_pred             CCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhc-chhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHH
Q 038171          101 RPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLF-NSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMS  179 (509)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  179 (509)
                      +.......  .. |.+.++..+|+.|+++|+. +.+.| +++.++.+.+.+.+.++++++.+..    ++.+|+.+++..
T Consensus       116 ~~~~~~~~--~~-g~~~~~~~~g~~w~~~R~~-~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~  187 (490)
T PLN02302        116 GWPESTVE--LI-GRKSFVGITGEEHKRLRRL-TAAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRK  187 (490)
T ss_pred             CCchhHHH--Hh-ccccccccCcHHHHHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHH
Confidence            32211111  11 3344555679999999998 56777 5778899999999999999998853    346999999999


Q ss_pred             hHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 038171          180 LSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID  259 (509)
Q Consensus       180 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  259 (509)
                      +++++++.++||.+.+.      ..+.+...+......+..  ....+|..        ..++..++.+.+.+++.+.++
T Consensus       188 ~~~~vi~~~~~G~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~l~~~~~~~i~  251 (490)
T PLN02302        188 LTFKIIMYIFLSSESEL------VMEALEREYTTLNYGVRA--MAINLPGF--------AYHRALKARKKLVALFQSIVD  251 (490)
T ss_pred             HHHHHHHHHHcCCCChH------HHHHHHHHHHHHHHHhhh--CCcCCCch--------hhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987643      122222222222111111  11112211        122334455677788888887


Q ss_pred             hhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHH
Q 038171          260 EHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIR  339 (509)
Q Consensus       260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~  339 (509)
                      ++++....+......|+++.|+++.++++  ..++++++.++++.+++||+|||+++++|++++|++||++|+|+++|++
T Consensus       252 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~  329 (490)
T PLN02302        252 ERRNSRKQNISPRKKDMLDLLLDAEDENG--RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQE  329 (490)
T ss_pred             HHHHhhhccCCCCcCCHHHHHHhhhccCC--CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            77654322211122799999998754432  3589999999999999999999999999999999999999999999999


Q ss_pred             HhhCCC---CCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCC
Q 038171          340 SLVGGN---KSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENP  416 (509)
Q Consensus       340 ~~~~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp  416 (509)
                      ++.+..   ...+++++++++|||+|||+|+||++|++|. .+|.+.+|++++||.||||+.|+++.+++||||++|+||
T Consensus       330 ~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP  408 (490)
T PLN02302        330 EIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNP  408 (490)
T ss_pred             HHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCc
Confidence            998642   1237899999999999999999999999998 469999999999999999999999999999999999999


Q ss_pred             CCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeecc
Q 038171          417 EEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKN  496 (509)
Q Consensus       417 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (509)
                      ++|+||||++.+.    .+..++|||+|+|+|+|++||.+|++++++.|+++|++++.++..  ++    .......|++
T Consensus       409 ~~F~PeR~~~~~~----~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~----~~~~~~~p~~  478 (490)
T PLN02302        409 KEFDPSRWDNYTP----KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC--KV----MYLPHPRPKD  478 (490)
T ss_pred             cccChhhcCCCCC----CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC--cc----eeCCCCCCCC
Confidence            9999999997532    346799999999999999999999999999999999999865421  11    2233478889


Q ss_pred             ceEEEEeecc
Q 038171          497 FLVLLAKYHE  506 (509)
Q Consensus       497 ~~~~~~~~~~  506 (509)
                      ++.+++++|.
T Consensus       479 ~~~~~~~~~~  488 (490)
T PLN02302        479 NCLARITKVA  488 (490)
T ss_pred             CceEEEEecc
Confidence            9999998874


No 27 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.6e-71  Score=542.64  Aligned_cols=456  Identities=24%  Similarity=0.376  Sum_probs=354.9

Q ss_pred             CCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171           32 SLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT  107 (509)
Q Consensus        32 ~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~  107 (509)
                      ++-.|-.+||++|+.+.+.    ++.++..+.+|+++||++|++++|+.++++++||+++++|+++.+..|..++.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            3446788999999987663    567789999999999999999999999999999999999998766667655432211


Q ss_pred             hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhcccc-chHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHH
Q 038171          108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRP-IREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTIC  186 (509)
Q Consensus       108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~  186 (509)
                      ..  ..+. .++..+|+.|+++||. +++.|+...++.+.+ ++.++++.+++.+.+...+++++|+.+++..+++|+++
T Consensus        92 ~~--~~~~-~i~~~~g~~wk~~Rk~-l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         92 EF--LFGS-GFAIAEGELWTARRRA-VVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             HH--HhcC-ccccCCchHHHHHHHh-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            11  1233 4455679999999998 788999888887654 77888999999998766567799999999999999999


Q ss_pred             HHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhh--hhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038171          187 RLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGW--IDKLTGMMRRLENNVQESDRFYQELIDEHLDP  264 (509)
Q Consensus       187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (509)
                      .++||.+++..+.    ...+.+.+......... .....+|++.+  +..+.+..++..++.+.+.+++.+.++++++.
T Consensus       168 ~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~  242 (489)
T PLN02936        168 LSVFNYNFDSLTT----DSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEI  242 (489)
T ss_pred             HHHcCCCcccccc----CcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999876431    12233333332221111 11123343221  11111234456667777777777777665432


Q ss_pred             ccc-------cc--ccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHH
Q 038171          265 KRT-------KA--DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQ  335 (509)
Q Consensus       265 ~~~-------~~--~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~  335 (509)
                      .+.       +.  .....|+++.|+++.      ..++++++.++++++++||+||||++++|++++|++||++|++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~  316 (489)
T PLN02936        243 VEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQ  316 (489)
T ss_pred             HhhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            110       00  011268999988642      248899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCC
Q 038171          336 EEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWEN  415 (509)
Q Consensus       336 ~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~d  415 (509)
                      +|++++++.  +.++++++++||||+|||+||||++|++|...+|.+.+|+.++||.||+|+.|+++.+++||||++|+|
T Consensus       317 ~Ei~~~~~~--~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~d  394 (489)
T PLN02936        317 EELDRVLQG--RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWER  394 (489)
T ss_pred             HHHHHHhcC--CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCC
Confidence            999999874  347899999999999999999999999999887877888888999999999999999999999999999


Q ss_pred             CCCCCCCcCCCCCCC--CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceee
Q 038171          416 PEEFNPERFIDRSVD--FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVH  493 (509)
Q Consensus       416 p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (509)
                      |++|+||||++++..  ....+..++|||.|+|.|||++||++|+++++++|+++|++++.++.   ++  ....+++.+
T Consensus       395 P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~  469 (489)
T PLN02936        395 AEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DI--VMTTGATIH  469 (489)
T ss_pred             ccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---cc--ceecceEEe
Confidence            999999999965421  12234579999999999999999999999999999999999987653   22  223467888


Q ss_pred             eccceEEEEeecccCC
Q 038171          494 KKNFLVLLAKYHEYVN  509 (509)
Q Consensus       494 ~~~~~~~~~~~~~~~~  509 (509)
                      |++++.+++++|..-|
T Consensus       470 ~~~~~~v~~~~R~~~~  485 (489)
T PLN02936        470 TTNGLYMTVSRRRVPD  485 (489)
T ss_pred             eCCCeEEEEEeeeCCC
Confidence            9999999999997643


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=6.9e-71  Score=532.56  Aligned_cols=438  Identities=19%  Similarity=0.272  Sum_probs=336.9

Q ss_pred             CCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCch
Q 038171           29 YASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPAS  104 (509)
Q Consensus        29 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~  104 (509)
                      .+.+.||||.++|++||++.+.    ..++..++.+++++||++++++++++++|+|+||+.+++++.++...|..+...
T Consensus        27 ~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~  106 (472)
T PLN02987         27 RRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPG  106 (472)
T ss_pred             CCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcH
Confidence            3446789999999999998763    245788899999999999999999999999999999999999887777544322


Q ss_pred             hhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHH
Q 038171          105 VATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNT  184 (509)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~v  184 (509)
                      .....  . |..+++..+|+.|+++|++ +.++++.+.+..+.   .+++.++++......  .+++++.+.+.++++++
T Consensus       107 ~~~~~--l-g~~~l~~~~g~~wr~~R~~-~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~~t~~v  177 (472)
T PLN02987        107 SISNL--L-GKHSLLLMKGNLHKKMHSL-TMSFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKKITFEL  177 (472)
T ss_pred             HHHHH--h-CcccccccCcHHHHHHHHH-HHHhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHHHHHHH
Confidence            12211  2 3234444579999999998 55554544444332   222334433322211  14699999999999999


Q ss_pred             HHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038171          185 ICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDP  264 (509)
Q Consensus       185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (509)
                      +++++||.+.+.      ..+.+.+.+.......    ....+|++      ....++..++.+++.+++.+.++++++.
T Consensus       178 i~~~~fg~~~~~------~~~~~~~~~~~~~~~~----~~~~~p~l------~~~~~~~~~~~~~~~~~~~~~i~~r~~~  241 (472)
T PLN02987        178 TVKQLMSFDPGE------WTESLRKEYVLVIEGF----FSVPLPLF------STTYRRAIQARTKVAEALTLVVMKRRKE  241 (472)
T ss_pred             HHHHHcCCCChH------HHHHHHHHHHHHHhhh----hcCCCcCC------CchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999976542      1122222222221111    12233443      1334566778888999999999888765


Q ss_pred             cccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCC
Q 038171          265 KRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       265 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~  344 (509)
                      ...+.. ..+|+++.|++..      ..++++++.+++.++++||+|||+++++|++++|++||++|+++++|++++.+.
T Consensus       242 ~~~~~~-~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~  314 (472)
T PLN02987        242 EEEGAE-KKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAM  314 (472)
T ss_pred             hhccCc-ccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcc
Confidence            332211 1279999999752      258999999999999999999999999999999999999999999999998753


Q ss_pred             --CCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCC
Q 038171          345 --NKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE  422 (509)
Q Consensus       345 --~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~  422 (509)
                        ....++++++.++||++||++||||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++||||
T Consensus       315 ~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~Pe  393 (472)
T PLN02987        315 KSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPW  393 (472)
T ss_pred             cCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcc
Confidence              22457889999999999999999999999986 579999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEE
Q 038171          423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLA  502 (509)
Q Consensus       423 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (509)
                      ||++++... .....++|||+|+|.|||++||++|++++++.|+++|+|++.++.+       .....++.|++++.+++
T Consensus       394 Rfl~~~~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-------~~~~~~~~p~~~~~~~~  465 (472)
T PLN02987        394 RWQSNSGTT-VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDK-------LVFFPTTRTQKRYPINV  465 (472)
T ss_pred             cCCCCCCCC-CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCc-------eeecccccCCCCceEEE
Confidence            999754321 1346799999999999999999999999999999999999876532       12245889999999999


Q ss_pred             eeccc
Q 038171          503 KYHEY  507 (509)
Q Consensus       503 ~~~~~  507 (509)
                      ++|--
T Consensus       466 ~~r~~  470 (472)
T PLN02987        466 KRRDV  470 (472)
T ss_pred             Eeccc
Confidence            99854


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=3.4e-69  Score=524.90  Aligned_cols=443  Identities=21%  Similarity=0.305  Sum_probs=341.3

Q ss_pred             CcccccccCCCCCCCchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceE
Q 038171           40 LPFIGNLHQFDSSKPHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLI  118 (509)
Q Consensus        40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (509)
                      .++.|++... ..+.+..+..+.++++ .+++++.++.  ++++||+.+++++.++...|.+......... ...|. ++
T Consensus        49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~-~~~g~-gi  123 (502)
T PLN02426         49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG-DLLGR-GI  123 (502)
T ss_pred             CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH-HhcCC-ce
Confidence            4578888765 2345667777888887 5778776554  8999999999999977666654432211111 11244 45


Q ss_pred             ecCCchhHHHHHHHHHHhhcchhhhhccc--cchHHHHHHHHHHHHHhhcc--CCccchHHHHHHhHHHHHHHHHhcCCC
Q 038171          119 FSPYGEYWREIRKICVVHLFNSIRAQNFR--PIREDEVSRMIESISKSAAA--SKQVNLSEKTMSLSCNTICRLAFGKRS  194 (509)
Q Consensus       119 ~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~~~  194 (509)
                      ++.+|+.|+++||. +++.|+...++.+.  +.+++..+++++.+.+.++.  +.++|+.+++..+++|+|+.++||.++
T Consensus       124 ~~~~g~~wk~~Rk~-l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        124 FNVDGDSWRFQRKM-ASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             eecCcHHHHHHHHH-hHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            66789999999998 78999998888763  67778888888888765422  467999999999999999999999998


Q ss_pred             CCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhh-hh-hhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccC
Q 038171          195 DGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWID-KL-TGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ  272 (509)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  272 (509)
                      +..+.. ....++.+.+......... ......|++.++. ++ .+..++..++.+.+.+++.++++++++...  ..  
T Consensus       203 ~~l~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~--~~--  276 (502)
T PLN02426        203 GCLELS-LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF--SA--  276 (502)
T ss_pred             cccCCC-CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc--CC--
Confidence            765321 1223455555443322211 1111224333221 11 133466777888899999999988765421  11  


Q ss_pred             cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChh
Q 038171          273 QEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDED  352 (509)
Q Consensus       273 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~  352 (509)
                      ..|+++.|+++        ..+++++.++++++++||+|||+++++|++++|++||++|+||++||+++.+.+...++++
T Consensus       277 ~~dll~~ll~~--------~~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~  348 (502)
T PLN02426        277 SKDLLSRFMAS--------INDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFE  348 (502)
T ss_pred             cchHHHHHHhc--------CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHH
Confidence            27999999974        2367899999999999999999999999999999999999999999999987654568999


Q ss_pred             hhccchhHHHHHHhhhccCCCCcccccccccCCccc-cCceeCCCCEEEeehhhhcCCCCCC-CCCCCCCCCcCCCCCCC
Q 038171          353 DVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII-DGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVD  430 (509)
Q Consensus       353 ~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~  430 (509)
                      ++++||||+|||+||||++|++|.. .|.+.+|.++ +|+.||+||.|.++++++||||++| +||++|+||||++++..
T Consensus       349 ~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~  427 (502)
T PLN02426        349 EMKEMHYLHAALYESMRLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVF  427 (502)
T ss_pred             HHhcChHHHHHHHHHHhCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCc
Confidence            9999999999999999999999985 4999988776 9999999999999999999999999 99999999999975321


Q ss_pred             CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171          431 FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE  506 (509)
Q Consensus       431 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (509)
                      ....++.++|||+|+|.|+|++||++|++++++.|+++|++++.++..  + ......+++.+|++++.|++++|.
T Consensus       428 ~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~--~-~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        428 VPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSN--R-APRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCC--C-CCcccceeEEecCCCEEEEEEEcc
Confidence            122456789999999999999999999999999999999999864322  1 123345789999999999999985


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.8e-67  Score=465.73  Aligned_cols=445  Identities=22%  Similarity=0.388  Sum_probs=355.4

Q ss_pred             CCCCCCC-CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc
Q 038171           32 SLPPGPK-GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL  110 (509)
Q Consensus        32 ~~ppgp~-~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~  110 (509)
                      +.||.-+ ++||+|+...| ++++..++++.++||||||++.++|+.+.++.+|+....++......+............
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            5666544 58999999999 999999999999999999999999999999999999999998763333222221111111


Q ss_pred             ccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHH-HHHhhccCCccchHHHHHHhHHHHHHHHH
Q 038171          111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIES-ISKSAAASKQVNLSEKTMSLSCNTICRLA  189 (509)
Q Consensus       111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  189 (509)
                      .+ |.+.+....+....++.+. ....+....++++.+.+.+++.+.++. +.   ++|....+......+.+.+.-.+.
T Consensus       110 vF-g~~v~~d~~~~~~~e~~~~-~k~~L~~~~lk~~~e~m~~el~~~f~~~~~---~s~~~d~l~~~~~~ii~tAs~~ll  184 (486)
T KOG0684|consen  110 VF-GKGVVYDVPNHVMMEQKKF-FKSALGGVALKSLVELMLEELHAYFETSLG---ESGETDGLYTFCRLIIFTASRLLL  184 (486)
T ss_pred             hc-CCCccccCCCchHHHHHHH-HHHHhchhhHHHHHHHHHHHHHHHHhcccc---cccchhHhhhhhHHHhhhhHHHhh
Confidence            22 4556666667777788887 677788899999999999999998888 33   356677788888888888888888


Q ss_pred             hcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Q 038171          190 FGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKA  269 (509)
Q Consensus       190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (509)
                      ||......      +++......++...+..  +...+|.  +++  ....++..++.+++.+.+...+.++++..+.  
T Consensus       185 ~~e~r~~~------d~~~a~l~~dLd~~F~~--~d~~FP~--~LP--~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~--  250 (486)
T KOG0684|consen  185 GGEVRDQL------DADVAKLYHDLDQGFQP--FDFLFPY--NLP--IPLLRRRDRARKKISKIFSKIILDRRASISK--  250 (486)
T ss_pred             hhhhhhhh------cchHHHHHHHHhccccc--hHhhccc--CCC--cchhhhHHHHHHHHHHHHHHHHHHHHhcccc--
Confidence            88766542      33444555555543332  2333442  111  1344555588888899998888888776532  


Q ss_pred             ccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCC
Q 038171          270 DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFV  349 (509)
Q Consensus       270 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~  349 (509)
                        .+.|++..+++-..++   ...+++++.+..+.+++||+.||+.|.+|++++|++|||+++.+++|+..++|.....+
T Consensus       251 --~~~dmlq~l~~~y~dg---~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l  325 (486)
T KOG0684|consen  251 --WDNDMLQSLMEKYKDG---RPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKL  325 (486)
T ss_pred             --ccHHHHHHHHHHhhcC---CcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCC
Confidence              2278999999844444   37899999999999999999999999999999999999999999999999999886779


Q ss_pred             ChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccC----ceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCC
Q 038171          350 DEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDG----YEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFI  425 (509)
Q Consensus       350 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g----~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  425 (509)
                      +.+++++||.|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|.+|.++++.+|+||++|+||+.|+|+||+
T Consensus       326 ~~d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~  404 (486)
T KOG0684|consen  326 TYDQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFL  404 (486)
T ss_pred             CHHHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhcc
Confidence            99999999999999999999999998755 99999988866    99999999999999999999999999999999999


Q ss_pred             CCCCCC--CCC--CceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEE
Q 038171          426 DRSVDF--KGK--NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL  501 (509)
Q Consensus       426 ~~~~~~--~~~--~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (509)
                      +++.+.  .+.  .+.+||||+|.|.|||+.||.+|+|.++..+|++||+++.++ +..+++.   ...++.|++.++++
T Consensus       405 ~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~---s~~v~~P~g~v~ir  480 (486)
T KOG0684|consen  405 KDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDY---SRMVMQPEGDVRIR  480 (486)
T ss_pred             CCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCH---HHhhcCCCCCceEE
Confidence            765433  122  344699999999999999999999999999999999999987 3344443   23388999999999


Q ss_pred             Eeecc
Q 038171          502 AKYHE  506 (509)
Q Consensus       502 ~~~~~  506 (509)
                      .|.|.
T Consensus       481 YK~R~  485 (486)
T KOG0684|consen  481 YKRRP  485 (486)
T ss_pred             EeecC
Confidence            98874


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.1e-61  Score=462.39  Aligned_cols=408  Identities=18%  Similarity=0.293  Sum_probs=297.6

Q ss_pred             CCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCC-eEEEeecCccE-------EEecCHHHHHHHHHh---
Q 038171           29 YASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGP-LMSLRIGFVPT-------LIVSSAKMAKETLKA---   93 (509)
Q Consensus        29 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------vvv~dp~~~~~i~~~---   93 (509)
                      .+.+.|||+.++|++|++.++.    ..++..++.+.++|||+ ||+++++|.|+       |+++||+.++.+|.+   
T Consensus        14 ~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~   93 (480)
T PLN02648         14 LPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKV   93 (480)
T ss_pred             CCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhc
Confidence            3456789999999999998653    45667999999999999 99999998666       999999999999975   


Q ss_pred             -CCccccCCCchhhhhccccCCcc---eEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCC
Q 038171           94 -HDLQFSGRPASVATQRLTYNGLD---LIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASK  169 (509)
Q Consensus        94 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  169 (509)
                       +...+.... .... . .+ |.+   .++..+|+.|+++||+ +.+.|+. .++.+.+.+++.++++++.|......+.
T Consensus        94 ~~~~~~~~~~-~~~~-~-l~-G~~~~~s~~~~~g~~H~r~Rrl-l~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~  167 (480)
T PLN02648         94 DKRDVFTGTY-MPST-A-FT-GGYRVLSYLDPSEPKHAKLKSF-LFELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKG  167 (480)
T ss_pred             cccccceeee-ccCc-c-cc-CCceeeeecCCCCchHHHHHHH-HHHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCC
Confidence             333333211 1111 1 22 333   5666789999999998 6889984 6788999999999999999965434556


Q ss_pred             ccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHH
Q 038171          170 QVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQE  249 (509)
Q Consensus       170 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~  249 (509)
                      ++|+.+.++.+++|++++++||.+.+..    ...+.+..........       ..+|...                ..
T Consensus       168 ~vdv~~~~~~lt~~vi~~~lfG~~~~~~----~l~~~~~~~~~~~~~~-------~~~p~~~----------------~~  220 (480)
T PLN02648        168 KAEFNDPLDQMAFNFLCKALTGKDPSET----ALGSDGPALIQKWLAL-------QLAPLAS----------------TG  220 (480)
T ss_pred             CccccchHHHHHHHHHHHHHcCCCcchh----hhccchhHHHHHHHHH-------HhhHHHH----------------cC
Confidence            7999999999999999999999866531    0111221122111110       0011100                00


Q ss_pred             HHHHHHHHHHhhcCcc--cccccc--C---cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHH-HHHhcCCchHhHHHHHH
Q 038171          250 SDRFYQELIDEHLDPK--RTKADM--Q---QEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMN-IFVAGTDTSAATLVWTM  321 (509)
Q Consensus       250 ~~~~~~~~i~~~~~~~--~~~~~~--~---~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tta~~l~~~l  321 (509)
                      +..++++++.++....  ......  .   -.+.++.++....+.    ++++++++++++. +.+++++||+++++|++
T Consensus       221 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l  296 (480)
T PLN02648        221 LPHVLEELLLHTFPLPFFLVKSDYDKLYDFFRASATEALDLAEKF----GISREEALHNLLFVLGFNAFGGFKIFFPALL  296 (480)
T ss_pred             chHHHHHHhhcccCCchhhhhccHHHHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            0111111111110000  000000  0   011222444433332    4999999999875 45677888889999999


Q ss_pred             HHHhhChH-HHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCcccc----CceeCCC
Q 038171          322 TYLMKHPR-VMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIID----GYEIPAK  396 (509)
Q Consensus       322 ~~L~~~p~-~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~----g~~ip~g  396 (509)
                      ++|++||+ +|++|++|++++.+..++.++++++++|||+++||+||||++|++++.. |.+.+|++++    ||.||||
T Consensus       297 ~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG  375 (480)
T PLN02648        297 KWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKG  375 (480)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCC
Confidence            99999995 9999999999998643356899999999999999999999999999865 7889999996    7999999


Q ss_pred             CEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeec---------ccCCCCCCCChhHHHHHHHHHHHHhHh
Q 038171          397 TLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIP---------FGAGRRICPGMHLGIATVDLALANLLY  467 (509)
Q Consensus       397 ~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~---------Fg~G~r~C~G~~~a~~~~~~~l~~ll~  467 (509)
                      +.|+++.+.+||||++|+||++|||+||++++..   ....+++         ||+|+|.|+|++||++|+++++++|++
T Consensus       376 ~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~  452 (480)
T PLN02648        376 EMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFL  452 (480)
T ss_pred             CEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999875322   1123344         467789999999999999999999999


Q ss_pred             cce-eeCCCCC
Q 038171          468 KFD-WEMPPGM  477 (509)
Q Consensus       468 ~~~-~~~~~~~  477 (509)
                      +|+ |++.++.
T Consensus       453 ~f~~~~l~~~~  463 (480)
T PLN02648        453 RYDSFEIEVDT  463 (480)
T ss_pred             HhCEEeecCCc
Confidence            998 9987764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.8e-56  Score=421.72  Aligned_cols=383  Identities=27%  Similarity=0.411  Sum_probs=305.7

Q ss_pred             CchhHHHHHhhhCCeEEEeecCcc--EEEecCHHHHHHHHHhCCccccCCCchhhhh--ccccCCcceEecCCchhHHHH
Q 038171           54 PHVSFWELSKKYGPLMSLRIGFVP--TLIVSSAKMAKETLKAHDLQFSGRPASVATQ--RLTYNGLDLIFSPYGEYWREI  129 (509)
Q Consensus        54 ~~~~~~~~~~kyG~v~~i~~~~~~--~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~w~~~  129 (509)
                      +......+.+.||.++.++..+..  .+++++++.+++++.++. .++.........  .....|.+.++..+|+.|.++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            345566788889998888876654  899999999999999764 122221111110  111223444667789999999


Q ss_pred             HHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHH
Q 038171          130 RKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHT  209 (509)
Q Consensus       130 Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~  209 (509)
                      ||+ +++.|+++.++.+.+.+.+.++++++.+ .  .. ..+++.+.+..+++++|+ .+||.+...       ...+..
T Consensus       103 Rkl-~~~~F~~~~~~~~~~~i~~~~~~~~~~~-~--~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~-------~~~~~~  169 (411)
T COG2124         103 RKL-LAPAFTPRALRGYRPLIREIADRLLDDL-W--QG-GADLVLDFAAELTLRVIA-ELLGVPLED-------RPQLLR  169 (411)
T ss_pred             HHH-hccccCHHHHHHHHHHHHHHHHHHHHhc-c--cC-CchhHHHHhhhhhHHHHH-HHhCCCHHH-------HHHHHH
Confidence            998 8999999999999999999999999999 3  22 789999999999999999 999987753       122222


Q ss_pred             HHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCC
Q 038171          210 LLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGF  289 (509)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  289 (509)
                      ........   .     .|....    .....+..++...+.+++..+|++++.+..       +|+++.|+.+.++++ 
T Consensus       170 ~~~~~~~~---~-----~~~~~~----~~~~~~~~~a~~~~~~~~~~li~~rR~~~~-------~dlls~l~~a~~~~~-  229 (411)
T COG2124         170 WSDALLLR---L-----DPDLGP----EEPWRRARAARRELDAYLRALIAERRAAPR-------DDLLSLLLSAEDDGG-  229 (411)
T ss_pred             HHHHHHhc---c-----CcccCC----cccHHHHHHHHHHHHHHHHHHHHHhccCCc-------ccHHHHHHHHhhCCC-
Confidence            22221111   0     011110    123456778888999999999999883322       899999999988764 


Q ss_pred             CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhc
Q 038171          290 KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMR  369 (509)
Q Consensus       290 ~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR  369 (509)
                       ..++++||+++++++++||||||+++++|+++.|++||+.++++++|.+.                 ||++++|+|+||
T Consensus       230 -~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-----------------~~~~~~v~E~LR  291 (411)
T COG2124         230 -GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-----------------PLLEAVVEETLR  291 (411)
T ss_pred             -CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-----------------HHHHHHHHHHHH
Confidence             26999999999999999999999999999999999999999999998653                 899999999999


Q ss_pred             cCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCC
Q 038171          370 LQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP  449 (509)
Q Consensus       370 l~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~  449 (509)
                      ++|+++. .+|.+++|++++|+.||||+.|+++++++||||++|++|++|||+||.          ..++|||+|+|.|+
T Consensus       292 ~~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~Cl  360 (411)
T COG2124         292 LYPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCL  360 (411)
T ss_pred             hCCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCcccc
Confidence            9999999 789999999999999999999999999999999999999999999996          45899999999999


Q ss_pred             ChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171          450 GMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH  505 (509)
Q Consensus       450 G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (509)
                      |+.||++|++++++.+|++|++....+ .     .......+..+..+..+.++.+
T Consensus       361 G~~lA~~E~~~~l~~ll~r~~~~~~~~-~-----~~~~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         361 GAALARLELKVALAELLRRFPLLLLAE-P-----PPLVRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CHHHHHHHHHHHHHHHHHhCchhhcCC-C-----CCccccccccCCCcceeeeecC
Confidence            999999999999999999999886654 1     1223455666776777766654


No 33 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=71.17  E-value=16  Score=26.65  Aligned_cols=63  Identities=24%  Similarity=0.345  Sum_probs=45.0

Q ss_pred             CCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecC------ccEEEecCHHHHHHHHHh
Q 038171           28 SYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGF------VPTLIVSSAKMAKETLKA   93 (509)
Q Consensus        28 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~------~~~vvv~dp~~~~~i~~~   93 (509)
                      ....++||-...+-++.|++.   +-....+.++.-+||.|..+++|.      ..+||-.|-..++....+
T Consensus         8 ~~~~rlppevnriLyirNLp~---~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen    8 KQNIRLPPEVNRILYIRNLPF---KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             cCCCCCChhhheeEEEecCCc---cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            344556666666667777642   233566888899999999999885      347888888888887764


No 34 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=63.63  E-value=11  Score=28.88  Aligned_cols=18  Identities=11%  Similarity=0.394  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHHHhhhccc
Q 038171           10 LLCLPIFLFFVLRRHVTS   27 (509)
Q Consensus        10 ~l~~~~~~~~~~~~~~~~   27 (509)
                      ++.+.++++|+++|++++
T Consensus        77 vIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   77 VIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             HHHHHHHHHHHHHHHS--
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            334444445555555333


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=55.85  E-value=2.9  Score=35.11  Aligned_cols=44  Identities=27%  Similarity=0.277  Sum_probs=32.8

Q ss_pred             cchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEe
Q 038171          356 ELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYV  401 (509)
Q Consensus       356 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~  401 (509)
                      .-..+.|||.|+.-.....-..  =...+|+.++|..|||||.|+-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            3456788999998776666432  2346789999999999998865


No 36 
>COG3954 PrkB Phosphoribulokinase [Energy production and conversion]
Probab=54.29  E-value=95  Score=25.89  Aligned_cols=61  Identities=16%  Similarity=0.165  Sum_probs=38.3

Q ss_pred             HhcCCchHhHHHHHHHHHhhChHHH----------HHHHHHHHHhhCCCCCCCCh--hhhccchhHHHHHHhhh
Q 038171          307 VAGTDTSAATLVWTMTYLMKHPRVM----------KKVQEEIRSLVGGNKSFVDE--DDVQELHYLKAVVKETM  368 (509)
Q Consensus       307 ~ag~~tta~~l~~~l~~L~~~p~~q----------~~l~~Ei~~~~~~~~~~~~~--~~~~~lp~l~a~i~Etl  368 (509)
                      .||..||+-+.--++..+..++.+.          ..+..+|.+..... ..+++  .+.+.++.|+.++.|--
T Consensus        15 GAGTTTts~aFrKiF~~~~I~aa~iEGDsFHR~tRpeMd~~Irkar~~G-rhisyFgpeANdf~~LE~~f~eYg   87 (289)
T COG3954          15 GAGTTTTSLAFRKIFAQLNIHAAEVEGDSFHRYTRPEMDMAIRKARDAG-RHISYFGPEANDFGLLEQTFIEYG   87 (289)
T ss_pred             CCCcccHHHHHHHHHHhcCccHhhhccccccccCchhHHHHHHHHHHcC-CcceecCccccchHHHHHHHHHhc
Confidence            5777788888777777776665443          23455555544332 33333  34577899999988843


No 37 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=49.45  E-value=71  Score=30.94  Aligned_cols=36  Identities=8%  Similarity=0.159  Sum_probs=19.6

Q ss_pred             hhCCeEEEeecCccEEEecCHHHHHHHHHhCCcccc
Q 038171           64 KYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFS   99 (509)
Q Consensus        64 kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~   99 (509)
                      +||.|++-.+-++.+-|=.=|..-++=+.+....|+
T Consensus       222 rfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~  257 (534)
T KOG3653|consen  222 RFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS  257 (534)
T ss_pred             ccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence            688888777666654443333333444444444444


No 38 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=48.48  E-value=18  Score=23.21  Aligned_cols=23  Identities=35%  Similarity=0.593  Sum_probs=17.7

Q ss_pred             HHHHHHhhChHHHHHHHHHHHHh
Q 038171          319 WTMTYLMKHPRVMKKVQEEIRSL  341 (509)
Q Consensus       319 ~~l~~L~~~p~~q~~l~~Ei~~~  341 (509)
                      -.+.+|.+||++.+++.+.=.++
T Consensus         4 ~iV~YLv~nPevl~kl~~g~asL   26 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEGEASL   26 (57)
T ss_pred             HHHHHHHHChHHHHHHHcCCeeE
Confidence            35789999999999998754433


No 39 
>PF14459 Prok-E2_C:  Prokaryotic E2 family C
Probab=46.82  E-value=7.6  Score=28.23  Aligned_cols=20  Identities=35%  Similarity=0.511  Sum_probs=15.7

Q ss_pred             CCCceeecccCCCCCCCChh
Q 038171          433 GKNFEFIPFGAGRRICPGMH  452 (509)
Q Consensus       433 ~~~~~~~~Fg~G~r~C~G~~  452 (509)
                      +.-.+.+|||.|.-.|+|..
T Consensus       102 g~gss~~p~GaGaAaC~aAa  121 (131)
T PF14459_consen  102 GCGSSNNPFGAGAAACFAAA  121 (131)
T ss_pred             ccCcccCCcCccHHHHHHHH
Confidence            34456899999999998753


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=42.85  E-value=23  Score=24.28  Aligned_cols=40  Identities=10%  Similarity=0.198  Sum_probs=33.2

Q ss_pred             HHHhhhccCCCCcccccccccCC--ccccCceeCCCCEEEee
Q 038171          363 VVKETMRLQPPAPLLVPRETTEK--SIIDGYEIPAKTLVYVN  402 (509)
Q Consensus       363 ~i~EtlRl~p~~~~~~~R~~~~~--~~~~g~~ip~g~~v~~~  402 (509)
                      -++|.+.+.+....-+-|.+.++  +.++|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            47889999999888777877776  56699999999999874


No 41 
>PF05399 EVI2A:  Ectropic viral integration site 2A protein (EVI2A);  InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=42.83  E-value=29  Score=29.04  Aligned_cols=20  Identities=35%  Similarity=0.567  Sum_probs=11.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHH
Q 038171            1 MALLIVMIILLCLPIFLFFV   20 (509)
Q Consensus         1 ~~~~~~~~~~l~~~~~~~~~   20 (509)
                      ||+++|++++.++.+++.++
T Consensus       128 ~amLIClIIIAVLfLICT~L  147 (227)
T PF05399_consen  128 MAMLICLIIIAVLFLICTLL  147 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHH
Confidence            57777777655555554443


No 42 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=42.53  E-value=25  Score=27.21  Aligned_cols=22  Identities=14%  Similarity=0.371  Sum_probs=16.5

Q ss_pred             CCCChhHHHHHHHHHHHHhHhc
Q 038171          447 ICPGMHLGIATVDLALANLLYK  468 (509)
Q Consensus       447 ~C~G~~~a~~~~~~~l~~ll~~  468 (509)
                      .|.|++||+.++-.++.+++..
T Consensus        19 N~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS
T ss_pred             cccchHHHHHHHHHHHHHHhcC
Confidence            8999999999999999999863


No 43 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=40.43  E-value=89  Score=19.33  Aligned_cols=42  Identities=12%  Similarity=0.233  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHH
Q 038171          297 HIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEI  338 (509)
Q Consensus       297 ~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei  338 (509)
                      ++...+..++=.|.|..+-.+.--+...--||+....+..|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            344555555556666666666666666666888888777765


No 44 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=39.29  E-value=1.3e+02  Score=20.87  Aligned_cols=20  Identities=25%  Similarity=0.567  Sum_probs=9.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHH
Q 038171            1 MALLIVMIILLCLPIFLFFV   20 (509)
Q Consensus         1 ~~~~~~~~~~l~~~~~~~~~   20 (509)
                      |.++-.+++++++.++++++
T Consensus         1 Mgl~Da~~~~V~V~IVclli   20 (92)
T PHA02681          1 MGLLDALLTVIVISIVCYIV   20 (92)
T ss_pred             CchHHHHHHHHHHHHHHHHH
Confidence            44544444444444444444


No 45 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=37.98  E-value=69  Score=22.55  Aligned_cols=8  Identities=50%  Similarity=0.733  Sum_probs=4.8

Q ss_pred             CCCCcccc
Q 038171           37 PKGLPFIG   44 (509)
Q Consensus        37 p~~~p~~G   44 (509)
                      |-..|++|
T Consensus        64 PIYrPvI~   71 (94)
T PF05393_consen   64 PIYRPVIG   71 (94)
T ss_pred             Cccccccc
Confidence            34566777


No 46 
>PHA03049 IMV membrane protein; Provisional
Probab=37.71  E-value=84  Score=20.75  Aligned_cols=15  Identities=13%  Similarity=0.470  Sum_probs=6.4

Q ss_pred             HHHHHHHHHHHHHHH
Q 038171            6 VMIILLCLPIFLFFV   20 (509)
Q Consensus         6 ~~~~~l~~~~~~~~~   20 (509)
                      +++|++++.++++-+
T Consensus         8 ~iICVaIi~lIvYgi   22 (68)
T PHA03049          8 VIICVVIIGLIVYGI   22 (68)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            334444444444444


No 47 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=36.54  E-value=91  Score=20.73  Aligned_cols=15  Identities=13%  Similarity=0.445  Sum_probs=6.5

Q ss_pred             HHHHHHHHHHHHHHH
Q 038171            6 VMIILLCLPIFLFFV   20 (509)
Q Consensus         6 ~~~~~l~~~~~~~~~   20 (509)
                      +++|++++.++++-+
T Consensus         8 i~ICVaii~lIlY~i   22 (68)
T PF05961_consen    8 IIICVAIIGLILYGI   22 (68)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            334444444444444


No 48 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=35.90  E-value=18  Score=28.25  Aligned_cols=16  Identities=19%  Similarity=0.289  Sum_probs=6.4

Q ss_pred             HHHHhhhcccCCCCCC
Q 038171           18 FFVLRRHVTSSYASSL   33 (509)
Q Consensus        18 ~~~~~~~~~~~~~~~~   33 (509)
                      ++++..+.+++.++..
T Consensus        16 ~~~~~~~~rRR~r~G~   31 (130)
T PF12273_consen   16 LFLFYCHNRRRRRRGL   31 (130)
T ss_pred             HHHHHHHHHHHhhcCC
Confidence            3344444333333333


No 49 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=34.63  E-value=1.2e+02  Score=21.54  Aligned_cols=42  Identities=19%  Similarity=0.420  Sum_probs=26.2

Q ss_pred             HHHHHhcCCchHhHHHHHHHHHhhC-------hHHHHHHHHHHHHhhCC
Q 038171          303 MNIFVAGTDTSAATLVWTMTYLMKH-------PRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       303 ~~~~~ag~~tta~~l~~~l~~L~~~-------p~~q~~l~~Ei~~~~~~  344 (509)
                      +.+++.-.-+|+.+..--|..++.|       |+..+.+|.||.+|+..
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            3444433335555555555544432       88999999999998753


No 50 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.53  E-value=18  Score=22.69  Aligned_cols=11  Identities=45%  Similarity=0.918  Sum_probs=9.0

Q ss_pred             ecccCCCCCCC
Q 038171          439 IPFGAGRRICP  449 (509)
Q Consensus       439 ~~Fg~G~r~C~  449 (509)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            36999999985


No 51 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=31.55  E-value=16  Score=29.55  Aligned_cols=38  Identities=24%  Similarity=0.447  Sum_probs=27.3

Q ss_pred             CCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHH
Q 038171          418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGI  455 (509)
Q Consensus       418 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~  455 (509)
                      +|||++|=.==.....+....+-|..|.-.|-|.+=-.
T Consensus        36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs~e   73 (185)
T COG2101          36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKSVE   73 (185)
T ss_pred             ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCcHH
Confidence            78999985321122335677999999999999987544


No 52 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=31.20  E-value=32  Score=22.32  Aligned_cols=8  Identities=38%  Similarity=1.103  Sum_probs=5.9

Q ss_pred             CCCcCCCC
Q 038171          420 NPERFIDR  427 (509)
Q Consensus       420 ~P~R~l~~  427 (509)
                      ||||||.-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            77888864


No 53 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=30.66  E-value=31  Score=24.29  Aligned_cols=20  Identities=25%  Similarity=0.599  Sum_probs=17.6

Q ss_pred             HHHHHHHHhHhcceeeCCCC
Q 038171          457 TVDLALANLLYKFDWEMPPG  476 (509)
Q Consensus       457 ~~~~~l~~ll~~~~~~~~~~  476 (509)
                      .|+-++.++|+-|||.+.+-
T Consensus        61 ~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   61 CIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHhccCCceeeec
Confidence            68899999999999998763


No 54 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=30.54  E-value=51  Score=18.16  Aligned_cols=16  Identities=25%  Similarity=0.783  Sum_probs=12.8

Q ss_pred             CCceeecccCCCCCCC
Q 038171          434 KNFEFIPFGAGRRICP  449 (509)
Q Consensus       434 ~~~~~~~Fg~G~r~C~  449 (509)
                      ....|+|+++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3467899999899984


No 55 
>PHA03162 hypothetical protein; Provisional
Probab=30.36  E-value=47  Score=25.42  Aligned_cols=24  Identities=21%  Similarity=0.499  Sum_probs=20.2

Q ss_pred             cCCCCCCCChhHHHHHHHHHHHHh
Q 038171          442 GAGRRICPGMHLGIATVDLALANL  465 (509)
Q Consensus       442 g~G~r~C~G~~~a~~~~~~~l~~l  465 (509)
                      ++|.+.|||+...+-|+-.=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            569999999999998887777665


No 56 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=29.89  E-value=11  Score=35.73  Aligned_cols=43  Identities=21%  Similarity=0.204  Sum_probs=32.3

Q ss_pred             chhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEe
Q 038171          357 LHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYV  401 (509)
Q Consensus       357 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~  401 (509)
                      -..+.|||.|+.-+.-..-..  =...+|+.++|..||+||.|+-
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vr--lRLle~~~v~~~~ipkgt~l~g  297 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVK--LRLLEPIQAGDLVIPKGTVLYG  297 (410)
T ss_pred             CCceEEEEcCceEEecCCEEE--EEEcCceeeCCEEecCCCEEEE
Confidence            466788999988777665432  2346789999999999998764


No 57 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=29.71  E-value=1.5e+02  Score=18.56  Aligned_cols=35  Identities=17%  Similarity=0.297  Sum_probs=25.1

Q ss_pred             HHHHhhhCCeEEEeecC----ccEEEecCHHHHHHHHHh
Q 038171           59 WELSKKYGPLMSLRIGF----VPTLIVSSAKMAKETLKA   93 (509)
Q Consensus        59 ~~~~~kyG~v~~i~~~~----~~~vvv~dp~~~~~i~~~   93 (509)
                      .+..++||+|-++.+..    .-.|-..+++.++.....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~   40 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ   40 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence            56778999998887643    346667799988888763


No 58 
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=29.42  E-value=1.3e+02  Score=21.15  Aligned_cols=38  Identities=18%  Similarity=0.116  Sum_probs=29.0

Q ss_pred             hhHHHHHhhhCCe---EEEeecCccEEEecCH-----HHHHHHHHh
Q 038171           56 VSFWELSKKYGPL---MSLRIGFVPTLIVSSA-----KMAKETLKA   93 (509)
Q Consensus        56 ~~~~~~~~kyG~v---~~i~~~~~~~vvv~dp-----~~~~~i~~~   93 (509)
                      ...++++++|.++   +++..++.+-+.|++.     +.+.+++..
T Consensus        24 EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLqE   69 (81)
T PRK10597         24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQE   69 (81)
T ss_pred             HHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHHH
Confidence            4567888999987   8999999888888544     566666653


No 59 
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=29.34  E-value=2.2e+02  Score=20.56  Aligned_cols=37  Identities=11%  Similarity=0.166  Sum_probs=27.6

Q ss_pred             chHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCC
Q 038171          274 EDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTD  311 (509)
Q Consensus       274 ~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~  311 (509)
                      ++.++.+++..+.+. +..++-.|-...+..+..|.++
T Consensus        47 ~~~vd~im~~LD~n~-Dg~vdF~EF~~Lv~~l~~ac~~   83 (91)
T cd05024          47 PMAVDKIMKDLDDCR-DGKVGFQSFFSLIAGLLIACND   83 (91)
T ss_pred             HHHHHHHHHHhCCCC-CCcCcHHHHHHHHHHHHHHHHH
Confidence            789999998876654 4578888888877777666553


No 60 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=28.92  E-value=2.1e+02  Score=20.26  Aligned_cols=50  Identities=12%  Similarity=0.166  Sum_probs=41.5

Q ss_pred             CCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171          293 LTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV  342 (509)
Q Consensus       293 l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  342 (509)
                      -..+.........++-=+.+++....-.+.+-++||+..+++.+.+.+-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            34555666667888999999999999999999999999999998887643


No 61 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=28.19  E-value=67  Score=23.71  Aligned_cols=14  Identities=29%  Similarity=0.826  Sum_probs=5.9

Q ss_pred             HHHHHHHHHHHHHH
Q 038171            4 LIVMIILLCLPIFL   17 (509)
Q Consensus         4 ~~~~~~~l~~~~~~   17 (509)
                      ++.+++++++.+++
T Consensus        65 li~lls~v~IlVil   78 (101)
T PF06024_consen   65 LISLLSFVCILVIL   78 (101)
T ss_pred             HHHHHHHHHHHHHH
Confidence            34444444444333


No 62 
>PF10717 ODV-E18:  Occlusion-derived virus envelope protein ODV-E18;  InterPro: IPR019655  Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=27.71  E-value=1.7e+02  Score=20.47  Aligned_cols=13  Identities=31%  Similarity=0.697  Sum_probs=4.7

Q ss_pred             HHHHHHHHHHHHH
Q 038171            8 IILLCLPIFLFFV   20 (509)
Q Consensus         8 ~~~l~~~~~~~~~   20 (509)
                      ++++++.++++.+
T Consensus        31 LivLVIIiLlIml   43 (85)
T PF10717_consen   31 LIVLVIIILLIML   43 (85)
T ss_pred             HHHHHHHHHHHHH
Confidence            3333333333333


No 63 
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.92  E-value=70  Score=21.47  Aligned_cols=17  Identities=24%  Similarity=0.444  Sum_probs=6.9

Q ss_pred             HHHhhhcccCCCCCCCC
Q 038171           19 FVLRRHVTSSYASSLPP   35 (509)
Q Consensus        19 ~~~~~~~~~~~~~~~pp   35 (509)
                      +++.+..-.+...+.||
T Consensus        22 ~fiark~~~k~lk~NPp   38 (71)
T COG3763          22 FFIARKQMKKQLKDNPP   38 (71)
T ss_pred             HHHHHHHHHHHHhhCCC
Confidence            33333333333445554


No 64 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=24.99  E-value=79  Score=20.06  Aligned_cols=18  Identities=17%  Similarity=0.257  Sum_probs=15.5

Q ss_pred             hCCeEEEeecCccEEEec
Q 038171           65 YGPLMSLRIGFVPTLIVS   82 (509)
Q Consensus        65 yG~v~~i~~~~~~~vvv~   82 (509)
                      =|+++++.-||+.+.|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            489999999999988774


No 65 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=24.13  E-value=2.3e+02  Score=22.58  Aligned_cols=50  Identities=14%  Similarity=0.198  Sum_probs=36.2

Q ss_pred             cccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171           41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA   93 (509)
Q Consensus        41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~   93 (509)
                      -++|++..   .-....++++.++||+|..+.+.         +.-+|-..+++.++..+..
T Consensus        37 lfVgnL~~---~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         37 LFIGGLSW---GTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEEeCCCC---CCCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            34555543   23466788999999998777653         3457888899999999874


No 66 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=23.29  E-value=1.3e+02  Score=17.57  Aligned_cols=13  Identities=15%  Similarity=0.585  Sum_probs=10.0

Q ss_pred             HhhChHHHHHHHH
Q 038171          324 LMKHPRVMKKVQE  336 (509)
Q Consensus       324 L~~~p~~q~~l~~  336 (509)
                      +.+||++++.++.
T Consensus        23 ~~~HPei~~~i~~   35 (38)
T PF14483_consen   23 CERHPEIQQEIRS   35 (38)
T ss_dssp             HHHSTHHHHHHHT
T ss_pred             HHhChhHHHHHHh
Confidence            3489999988774


No 67 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=23.14  E-value=50  Score=28.05  Aligned_cols=20  Identities=30%  Similarity=0.836  Sum_probs=17.6

Q ss_pred             hhhcCCCCCCCCCCCCCCCc
Q 038171          404 WAIGRDPEAWENPEEFNPER  423 (509)
Q Consensus       404 ~~~~~d~~~~~dp~~F~P~R  423 (509)
                      +.-|.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34499999999999999988


No 68 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=22.93  E-value=2.2e+02  Score=21.36  Aligned_cols=11  Identities=36%  Similarity=0.389  Sum_probs=7.5

Q ss_pred             CCcccccccCC
Q 038171           39 GLPFIGNLHQF   49 (509)
Q Consensus        39 ~~p~~G~~~~~   49 (509)
                      .-|+-||+...
T Consensus        45 ~~p~YgNL~~~   55 (107)
T PF15330_consen   45 DDPCYGNLELQ   55 (107)
T ss_pred             CCccccccccc
Confidence            46778887654


No 69 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.29  E-value=1.9e+02  Score=20.56  Aligned_cols=35  Identities=6%  Similarity=0.062  Sum_probs=26.0

Q ss_pred             HHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHh
Q 038171           59 WELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKA   93 (509)
Q Consensus        59 ~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~   93 (509)
                      .+--++||+|....=-..-+++-++-+.+.++..+
T Consensus        19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            34456899998776444557777888999999875


No 70 
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=22.03  E-value=6.3e+02  Score=23.31  Aligned_cols=65  Identities=17%  Similarity=0.229  Sum_probs=42.2

Q ss_pred             CCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhh--ccchhHHHHHHhhhc
Q 038171          292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV--QELHYLKAVVKETMR  369 (509)
Q Consensus       292 ~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~--~~lp~l~a~i~EtlR  369 (509)
                      .-+-++|..++..|-+.|.                +|...+.|.++-. ++--.++.++..-+  .++.|.-..|.|+.|
T Consensus       342 PGtWDHI~~QiGMFSyTGL----------------tp~qV~~li~~h~-vyLl~~GRInisGLN~~NveyVAkAIde~Vr  404 (410)
T KOG1412|consen  342 PGTWDHITQQIGMFSYTGL----------------TPAQVDHLIENHK-VYLLSDGRINISGLNMKNVEYVAKAIDETVR  404 (410)
T ss_pred             CCcHHHHHhhccceeecCC----------------CHHHHHHHHHhce-EEEecCCcEeeeccccccHHHHHHHHHHHHH
Confidence            3467899999988888776                3443444444332 32222255555444  678999999999999


Q ss_pred             cCCC
Q 038171          370 LQPP  373 (509)
Q Consensus       370 l~p~  373 (509)
                      -.+.
T Consensus       405 ~~~~  408 (410)
T KOG1412|consen  405 AIKS  408 (410)
T ss_pred             hhcc
Confidence            7653


No 71 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=21.81  E-value=2.9e+02  Score=19.76  Aligned_cols=18  Identities=11%  Similarity=0.506  Sum_probs=15.2

Q ss_pred             ChHHHHHHHHHHHHhhCC
Q 038171          327 HPRVMKKVQEEIRSLVGG  344 (509)
Q Consensus       327 ~p~~q~~l~~Ei~~~~~~  344 (509)
                      .|+..+.+++||.+|+..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            489999999999988753


No 72 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=21.57  E-value=1.8e+02  Score=22.58  Aligned_cols=38  Identities=16%  Similarity=0.190  Sum_probs=28.6

Q ss_pred             chhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhC
Q 038171           55 HVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH   94 (509)
Q Consensus        55 ~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~   94 (509)
                      ...+.+|.++||.+--..  +...+...|++.++++...+
T Consensus        77 ~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~  114 (129)
T PF13625_consen   77 EQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP  114 (129)
T ss_pred             HHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence            456889999999864322  35677888999999998754


No 73 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=21.39  E-value=1.3e+02  Score=21.65  Aligned_cols=29  Identities=24%  Similarity=0.313  Sum_probs=22.8

Q ss_pred             HhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171          314 AATLVWTMTYLMKHPRVMKKVQEEIRSLV  342 (509)
Q Consensus       314 a~~l~~~l~~L~~~p~~q~~l~~Ei~~~~  342 (509)
                      ..++.|-+...-..||..+.|++||+++-
T Consensus        53 l~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   53 LFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            34566677777788999999999999864


No 74 
>KOG2376 consensus Signal recognition particle, subunit Srp72 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.78  E-value=52  Score=32.66  Aligned_cols=8  Identities=50%  Similarity=1.186  Sum_probs=4.4

Q ss_pred             CCCcCCCC
Q 038171          420 NPERFIDR  427 (509)
Q Consensus       420 ~P~R~l~~  427 (509)
                      ||||||+.
T Consensus       582 DPERWLP~  589 (652)
T KOG2376|consen  582 DPERWLPR  589 (652)
T ss_pred             Chhhcccc
Confidence            45666653


No 75 
>PF06024 DUF912:  Nucleopolyhedrovirus protein of unknown function (DUF912);  InterPro: IPR009261 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf78; it is a family of uncharacterised viral proteins.
Probab=20.57  E-value=47  Score=24.53  Aligned_cols=17  Identities=12%  Similarity=0.526  Sum_probs=7.2

Q ss_pred             HHHHHHHHHHHHHHHHH
Q 038171            4 LIVMIILLCLPIFLFFV   20 (509)
Q Consensus         4 ~~~~~~~l~~~~~~~~~   20 (509)
                      ++++++++++..+++|+
T Consensus        68 lls~v~IlVily~IyYF   84 (101)
T PF06024_consen   68 LLSFVCILVILYAIYYF   84 (101)
T ss_pred             HHHHHHHHHHHhhheEE
Confidence            33444444444444443


No 76 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=20.46  E-value=1.2e+02  Score=23.26  Aligned_cols=22  Identities=5%  Similarity=0.069  Sum_probs=10.2

Q ss_pred             HHHHHHHHHHHHHHHhhhcccC
Q 038171            7 MIILLCLPIFLFFVLRRHVTSS   28 (509)
Q Consensus         7 ~~~~l~~~~~~~~~~~~~~~~~   28 (509)
                      ++++++..+++++++.+..+++
T Consensus        70 i~gv~aGvIg~Illi~y~irR~   91 (122)
T PF01102_consen   70 IFGVMAGVIGIILLISYCIRRL   91 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Confidence            3344445555554444444443


No 77 
>PF11829 DUF3349:  Protein of unknown function (DUF3349);  InterPro: IPR021784  This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 99 to 124 amino acids in length. ; PDB: 2KVC_A 3OL3_B 3OL4_A 2LKY_A.
Probab=20.26  E-value=3.5e+02  Score=19.78  Aligned_cols=22  Identities=23%  Similarity=0.265  Sum_probs=16.0

Q ss_pred             CCCHHHHHHHHHHHHHhcCCch
Q 038171          292 DLTLDHIKAVLMNIFVAGTDTS  313 (509)
Q Consensus       292 ~l~~~~i~~~~~~~~~ag~~tt  313 (509)
                      .++++|+...+..++-.|...+
T Consensus        35 ~Ltd~ev~~Va~~L~~~~~~~~   56 (96)
T PF11829_consen   35 RLTDDEVAEVAAELAARGDPPV   56 (96)
T ss_dssp             TS-HHHHHHHHHHHHHHTSS-B
T ss_pred             cCCHHHHHHHHHHHHhcCCCCC
Confidence            6999999999888877776543


Done!