Query 038171
Match_columns 509
No_of_seqs 202 out of 1993
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 14:04:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 1.5E-79 5.1E-84 605.1 41.2 464 28-507 6-477 (479)
2 3pm0_A Cypib1, cytochrome P450 100.0 6.1E-80 2.1E-84 612.1 36.3 468 27-507 4-485 (507)
3 3swz_A Steroid 17-alpha-hydrox 100.0 3.4E-79 1.2E-83 603.9 41.3 464 28-506 4-479 (494)
4 3nxu_A Cytochrome P450 3A4; al 100.0 1.9E-79 6.3E-84 605.0 27.6 460 28-506 10-475 (485)
5 3k9v_A 1,25-dihydroxyvitamin D 100.0 8.1E-78 2.8E-82 593.2 38.6 451 28-505 20-482 (482)
6 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.8E-77 9.5E-82 588.2 41.9 459 28-506 6-472 (476)
7 3qz1_A Steroid 21-hydroxylase; 100.0 7.6E-79 2.6E-83 602.3 28.5 454 26-506 23-484 (496)
8 2fdv_A Cytochrome P450 2A6; CY 100.0 4.2E-77 1.4E-81 585.6 40.6 457 31-506 9-473 (476)
9 1po5_A Cytochrome P450 2B4; ox 100.0 4.6E-77 1.6E-81 585.4 40.1 454 31-506 9-473 (476)
10 2hi4_A Cytochrome P450 1A2; CY 100.0 1.1E-77 3.7E-82 592.4 34.1 458 32-505 16-487 (495)
11 3czh_A Cytochrome P450 2R1; vi 100.0 6.6E-77 2.2E-81 584.4 39.0 460 29-506 9-476 (481)
12 1r9o_A Cytochrome P450 2C9; mo 100.0 1E-76 3.4E-81 583.4 36.5 454 31-506 10-474 (477)
13 3s79_A Cytochrome P450 19A1; o 100.0 1.2E-76 4E-81 587.7 35.0 447 29-507 42-497 (503)
14 3ld6_A Lanosterol 14-alpha dem 100.0 1.7E-77 5.7E-82 586.0 26.2 445 30-506 9-454 (461)
15 3n9y_A Cholesterol SIDE-chain 100.0 7.5E-76 2.6E-80 579.5 32.9 455 28-506 5-475 (487)
16 2ve3_A Putative cytochrome P45 100.0 5.2E-75 1.8E-79 564.9 32.1 435 29-505 9-443 (444)
17 3mdm_A Cholesterol 24-hydroxyl 100.0 2.1E-73 7.2E-78 557.0 37.1 431 51-507 9-443 (456)
18 3gw9_A Sterol 14alpha-demethyl 100.0 3.8E-74 1.3E-78 561.9 26.1 442 31-506 2-450 (450)
19 2ij2_A Cytochrome P450 BM3; mo 100.0 4.3E-73 1.5E-77 555.2 33.4 446 32-506 3-452 (470)
20 2cib_A Cytochrome P450 51; hem 100.0 4.1E-74 1.4E-78 560.5 25.3 444 32-506 4-449 (455)
21 3dbg_A Putative cytochrome P45 100.0 3E-73 1E-77 556.9 25.3 437 31-505 22-461 (467)
22 3i3k_A Lanosterol 14-alpha dem 100.0 1.8E-72 6.2E-77 550.9 25.9 444 29-503 8-452 (461)
23 3v8d_A Cholesterol 7-alpha-mon 100.0 1.2E-69 4.1E-74 535.1 26.1 454 24-505 5-485 (491)
24 3dax_A Cytochrome P450 7A1; ch 100.0 1.8E-69 6.1E-74 534.6 26.2 449 27-505 8-485 (491)
25 3b6h_A Prostacyclin synthase; 100.0 7.5E-67 2.6E-71 516.3 32.0 451 29-506 15-490 (498)
26 2cd8_A Cytochrome P450 monooxy 100.0 9.5E-67 3.3E-71 503.5 29.4 402 29-507 23-430 (436)
27 3b98_A Prostaglandin I2 syntha 100.0 8.3E-67 2.8E-71 513.3 23.8 435 29-506 15-471 (475)
28 1izo_A P450bsbeta, cytochrome 100.0 4.1E-65 1.4E-69 491.2 32.5 404 40-506 8-416 (417)
29 1n97_A CYP175A1; electron tran 100.0 4.6E-66 1.6E-70 492.5 20.0 386 36-508 3-389 (389)
30 1jfb_A Nitric-oxide reductase 100.0 5.4E-64 1.8E-68 481.3 32.6 375 33-476 2-382 (404)
31 1ued_A P450 OXYC, P450 monooxy 100.0 4.7E-64 1.6E-68 480.8 28.8 385 30-501 8-405 (406)
32 3awm_A Fatty acid alpha-hydrox 100.0 7.4E-64 2.5E-68 482.1 29.9 405 34-505 4-413 (415)
33 3aba_A Cytochrome P450; oxidor 100.0 7.5E-63 2.6E-67 472.0 29.8 379 51-506 18-403 (403)
34 1cpt_A Cytochrome P450-TERP; o 100.0 2.1E-63 7.3E-68 480.0 25.6 407 29-505 3-428 (428)
35 1s1f_A Putative cytochrome P45 100.0 6E-62 2.1E-66 466.2 33.5 388 31-502 7-404 (406)
36 2zbx_A Cytochrome P450-SU1; be 100.0 3.1E-62 1.1E-66 469.1 31.4 371 31-476 4-384 (412)
37 3dsk_A Cytochrome P450 74A, ch 100.0 1.1E-62 3.6E-67 486.3 24.2 410 27-475 23-471 (495)
38 1odo_A Putative cytochrome P45 100.0 4.7E-62 1.6E-66 467.6 28.0 382 51-504 14-407 (408)
39 3abb_A CYP105D6, cytochrome P4 100.0 2.3E-62 7.9E-67 469.7 25.0 377 51-506 23-408 (408)
40 2jjn_A Cytochrome P450 113A1; 100.0 6.1E-62 2.1E-66 467.3 26.6 391 29-507 16-408 (411)
41 3a4g_A Vitamin D hydroxylase; 100.0 9E-62 3.1E-66 465.0 27.7 378 51-507 19-403 (411)
42 3ejb_B Biotin biosynthesis cyt 100.0 1.6E-61 5.5E-66 464.2 29.0 380 51-506 12-397 (404)
43 2dkk_A Cytochrome P450; CYP158 100.0 1.3E-61 4.3E-66 463.6 28.0 377 51-506 26-411 (411)
44 4fb2_A P450CIN; heme, monooxyg 100.0 3.3E-62 1.1E-66 467.3 23.4 375 51-508 18-396 (398)
45 2zwu_A Camphor 5-monooxygenase 100.0 3.1E-62 1E-66 468.5 23.0 396 27-507 6-412 (415)
46 2z3t_A Cytochrome P450; monoxy 100.0 3.3E-61 1.1E-65 463.2 30.0 381 51-506 19-417 (425)
47 3nc3_A Cytochrome P450 CYPX; c 100.0 6.9E-62 2.3E-66 469.9 24.8 387 51-504 52-440 (441)
48 3tyw_A Putative cytochrome P45 100.0 1E-60 3.6E-65 459.6 32.8 353 51-476 28-389 (417)
49 1q5d_A P450 epoxidase; cytochr 100.0 2.8E-61 9.5E-66 463.6 28.5 382 51-506 25-417 (419)
50 1gwi_A CYP154C1, cytochrome P4 100.0 5.6E-62 1.9E-66 466.8 22.6 380 51-506 16-410 (411)
51 2y5n_A MYCG, P-450-like protei 100.0 4.4E-61 1.5E-65 460.8 28.6 374 51-501 36-416 (417)
52 3buj_A CALO2; heme, iron, meta 100.0 5.6E-61 1.9E-65 458.7 28.6 376 52-506 13-397 (397)
53 2z36_A MOXA, cytochrome P450 t 100.0 1.3E-60 4.6E-65 457.2 31.1 367 32-476 7-385 (413)
54 2xkr_A CYP142, putative cytoch 100.0 5.8E-61 2E-65 458.7 28.0 379 51-508 17-397 (398)
55 3dan_A Cytochrome P450 74A2; A 100.0 2.6E-61 8.9E-66 473.9 25.3 409 29-476 6-454 (473)
56 2uuq_A CYP130, cytochrome P450 100.0 2.7E-61 9.1E-66 462.2 24.6 385 42-505 11-413 (414)
57 2xbk_A PIMD protein; epoxidati 100.0 4.8E-60 1.6E-64 451.2 31.2 367 51-501 25-403 (404)
58 1z8o_A 6-deoxyerythronolide B 100.0 8.2E-61 2.8E-65 458.3 25.1 373 51-502 13-402 (404)
59 3ivy_A Cytochrome P450 CYP125; 100.0 9.8E-61 3.4E-65 461.4 25.7 396 31-508 17-431 (433)
60 3tkt_A Cytochrome P450; aromat 100.0 2.3E-60 7.8E-65 460.9 26.3 363 54-474 47-426 (450)
61 2wm5_A CYP124, putative cytoch 100.0 4.5E-60 1.6E-64 456.3 27.5 358 52-475 44-414 (435)
62 3lxh_A Cytochrome P450; heme, 100.0 3.7E-60 1.3E-64 456.3 26.2 381 51-508 37-420 (421)
63 3r9b_A Cytochrome P450 164A2; 100.0 1.1E-59 3.8E-64 453.5 29.3 382 51-506 28-418 (418)
64 3oft_A Cytochrome P450, CYP101 100.0 3.3E-60 1.1E-64 453.8 22.2 351 51-477 23-375 (396)
65 1lfk_A OXYB, P450 monooxygenas 100.0 1.1E-59 3.7E-64 449.7 25.6 347 54-475 15-375 (398)
66 3mgx_A Putative P450 monooxyge 100.0 8.4E-60 2.9E-64 451.2 24.7 373 51-505 36-415 (415)
67 1n40_A P450 MT2, cytochrome P4 100.0 1.4E-59 4.8E-64 448.3 25.4 370 51-501 15-395 (396)
68 3oo3_A OXY protein; cytochrome 100.0 5.7E-59 1.9E-63 443.4 28.8 346 51-476 11-361 (384)
69 3rwl_A Cytochrome P450 alkane 100.0 6.2E-58 2.1E-62 440.2 30.5 378 52-504 38-426 (426)
70 3p3o_A Cytochrome P450; monoox 100.0 2.6E-57 8.8E-62 435.2 23.5 357 51-476 32-394 (416)
71 2wiy_A XPLA-heme, cytochrome P 100.0 1.7E-56 5.9E-61 426.3 28.9 354 52-476 20-374 (394)
72 3b4x_A 367AA long hypothetical 100.0 4.5E-57 1.5E-61 426.1 24.4 354 55-504 2-366 (367)
73 1io7_A Cytochrome P450 CYP119; 100.0 3.5E-57 1.2E-61 427.6 23.3 356 55-506 2-368 (368)
74 2rfb_A Cytochrome P450; heme, 100.0 6.2E-57 2.1E-61 421.6 22.8 320 63-476 2-324 (343)
75 4dnj_A Putative cytochrome P45 100.0 1.5E-54 5.3E-59 414.7 26.0 386 38-504 18-411 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 1.6E-49 5.6E-54 378.8 27.2 355 52-477 37-394 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 8.5E-48 2.9E-52 358.2 1.2 313 33-476 35-361 (381)
78 1s79_A Lupus LA protein; RRM, 62.1 23 0.00078 25.1 6.2 51 40-93 13-71 (103)
79 3lqv_A PRE-mRNA branch site pr 61.2 40 0.0014 24.2 7.7 58 33-93 3-66 (115)
80 3d2w_A TAR DNA-binding protein 60.6 17 0.00059 24.8 5.2 53 35-90 8-64 (89)
81 2krb_A Eukaryotic translation 55.3 25 0.00085 23.3 5.2 51 42-93 5-66 (81)
82 2diu_A KIAA0430 protein; struc 52.4 25 0.00085 24.6 4.6 52 41-93 12-65 (96)
83 2kxn_B Transformer-2 protein h 51.5 69 0.0024 23.7 7.6 56 35-93 43-107 (129)
84 1iqt_A AUF1, heterogeneous nuc 51.4 24 0.00084 22.8 4.6 41 54-94 12-61 (75)
85 2cqc_A Arginine/serine-rich sp 48.5 57 0.002 22.2 6.5 56 35-93 12-76 (95)
86 1sjq_A Polypyrimidine tract-bi 45.8 59 0.002 23.1 6.0 53 37-92 15-70 (105)
87 3beg_B Splicing factor, argini 45.2 60 0.002 23.3 6.3 51 40-93 18-70 (115)
88 2wbr_A GW182, gawky, LD47780P; 44.7 69 0.0024 22.0 5.9 51 39-92 8-61 (89)
89 2mss_A Protein (musashi1); RNA 44.0 39 0.0013 21.7 4.7 40 54-93 12-60 (75)
90 2nlw_A Eukaryotic translation 41.5 65 0.0022 22.6 5.9 54 39-93 16-80 (105)
91 2cq1_A PTB-like protein L; RRM 39.9 79 0.0027 22.2 6.0 53 37-92 14-69 (101)
92 2d9p_A Polyadenylate-binding p 38.5 83 0.0028 21.8 6.0 58 33-93 10-74 (103)
93 4f25_A Polyadenylate-binding p 38.2 67 0.0023 23.1 5.6 50 41-93 8-64 (115)
94 1x4c_A Splicing factor, argini 38.1 1E+02 0.0035 21.6 7.3 51 40-93 17-69 (108)
95 1sjr_A Polypyrimidine tract-bi 37.0 83 0.0028 24.6 6.1 49 42-93 50-103 (164)
96 1x4d_A Matrin 3; structural ge 36.9 74 0.0025 22.4 5.4 56 35-92 12-70 (102)
97 2cq3_A RNA-binding protein 9; 36.9 1E+02 0.0035 21.3 7.1 54 37-93 14-74 (103)
98 4fxv_A ELAV-like protein 1; RN 36.4 76 0.0026 22.0 5.4 50 41-93 22-80 (99)
99 2e5h_A Zinc finger CCHC-type a 36.4 97 0.0033 20.9 7.1 54 37-93 15-77 (94)
100 1x4e_A RNA binding motif, sing 36.0 56 0.0019 21.6 4.6 53 37-92 4-65 (85)
101 3s8s_A Histone-lysine N-methyl 35.4 81 0.0028 22.5 5.6 52 39-93 7-67 (110)
102 3r27_A HnRNP L, heterogeneous 35.1 1.2E+02 0.004 21.4 6.5 54 37-93 20-76 (100)
103 1x5p_A Negative elongation fac 34.8 1.1E+02 0.0037 20.9 7.0 52 37-93 14-68 (97)
104 2la6_A RNA-binding protein FUS 34.6 1E+02 0.0034 21.2 5.9 55 35-92 10-81 (99)
105 1oo0_B CG8781-PA, drosophila Y 34.6 1E+02 0.0035 21.6 6.1 50 41-93 29-87 (110)
106 1jdm_A Sarcolipin; helix, memb 34.6 48 0.0017 16.8 2.9 18 6-23 10-27 (31)
107 1whx_A Hypothetical protein ri 34.6 1E+02 0.0034 21.9 6.0 50 41-93 13-65 (111)
108 2dhg_A TRNA selenocysteine ass 34.3 1.1E+02 0.0039 21.1 6.6 56 35-93 6-70 (104)
109 2ad9_A Polypyrimidine tract-bi 34.2 98 0.0033 22.6 5.8 53 37-92 30-85 (119)
110 2do4_A Squamous cell carcinoma 33.9 1.1E+02 0.0039 20.9 6.9 53 38-93 17-77 (100)
111 3zzy_A Polypyrimidine tract-bi 32.9 80 0.0027 23.5 5.2 58 33-93 21-85 (130)
112 1whw_A Hypothetical protein ri 32.5 1.2E+02 0.004 20.7 6.0 51 40-93 10-69 (99)
113 1p27_B RNA-binding protein 8A; 32.4 95 0.0033 21.6 5.6 50 41-93 26-84 (106)
114 2dgv_A HnRNP M, heterogeneous 31.9 1.2E+02 0.0039 20.4 6.1 51 40-93 10-67 (92)
115 3ex7_B RNA-binding protein 8A; 31.8 1.1E+02 0.0037 22.2 6.0 58 40-100 24-91 (126)
116 2dnz_A Probable RNA-binding pr 31.6 1.2E+02 0.0041 20.4 7.3 54 37-93 4-66 (95)
117 2dnm_A SRP46 splicing factor; 31.4 1.2E+02 0.004 21.0 5.9 51 40-93 15-74 (103)
118 1x4g_A Nucleolysin TIAR; struc 31.1 1.2E+02 0.0041 21.3 5.9 51 40-93 27-80 (109)
119 1wex_A Hypothetical protein (r 31.1 1.4E+02 0.0047 21.0 6.8 53 37-92 14-69 (104)
120 2ytc_A PRE-mRNA-splicing facto 30.9 1.1E+02 0.0039 20.0 7.4 52 39-93 13-67 (85)
121 2cqb_A Peptidyl-prolyl CIS-tra 30.2 1E+02 0.0034 21.3 5.3 54 37-93 11-73 (102)
122 1m46_B IQ4, IQ4 motif from MYO 30.1 43 0.0015 15.8 2.0 12 329-340 8-19 (26)
123 3mdf_A Peptidyl-prolyl CIS-tra 29.5 1.2E+02 0.0041 19.8 6.6 54 37-93 6-68 (85)
124 2hvz_A Splicing factor, argini 29.0 1E+02 0.0034 21.2 5.1 49 42-93 4-56 (101)
125 2div_A TRNA selenocysteine ass 28.9 1.2E+02 0.0043 20.6 5.6 54 37-93 8-71 (99)
126 3s7r_A Heterogeneous nuclear r 28.7 96 0.0033 20.5 4.8 52 39-93 12-72 (87)
127 2kvi_A Nuclear polyadenylated 28.6 1.2E+02 0.0042 20.6 5.4 52 40-93 12-64 (96)
128 2dnp_A RNA-binding protein 14; 28.5 1.3E+02 0.0045 20.0 7.4 54 37-93 8-62 (90)
129 2jvr_A Nucleolar protein 3; RN 28.4 1.1E+02 0.0039 21.8 5.3 51 40-93 30-86 (111)
130 2k6l_A Putative uncharacterize 28.2 85 0.0029 18.7 3.5 35 326-371 10-44 (51)
131 2rs2_A Musashi-1, RNA-binding 28.1 1.2E+02 0.0041 21.4 5.5 52 40-94 27-87 (109)
132 3bs9_A Nucleolysin TIA-1 isofo 27.8 1.1E+02 0.0039 20.1 5.1 51 40-93 8-67 (87)
133 2dgs_A DAZ-associated protein 27.8 1.5E+02 0.005 20.2 7.7 58 39-99 11-77 (99)
134 1x5s_A Cold-inducible RNA-bind 27.5 1.5E+02 0.0051 20.3 6.7 54 37-93 11-73 (102)
135 2ku7_A MLL1 PHD3-CYP33 RRM chi 27.2 1.9E+02 0.0064 21.3 7.3 49 42-93 67-124 (140)
136 3md1_A Nuclear and cytoplasmic 27.1 1.2E+02 0.0043 19.6 5.2 49 42-93 5-62 (83)
137 2cq4_A RNA binding motif prote 26.9 94 0.0032 22.1 4.8 48 42-92 29-85 (114)
138 2xnq_A Nuclear polyadenylated 26.7 1.5E+02 0.0053 20.2 6.5 52 40-93 24-76 (97)
139 2x1f_A MRNA 3'-END-processing 26.6 1.5E+02 0.0052 20.0 6.0 49 42-93 6-63 (96)
140 2dh8_A DAZ-associated protein 26.3 1.6E+02 0.0055 20.3 5.9 55 38-95 16-79 (105)
141 2pe8_A Splicing factor 45; RRM 25.8 1.1E+02 0.0037 21.6 4.7 58 35-92 5-74 (105)
142 1nu4_A U1A RNA binding domain; 25.7 1.6E+02 0.0054 19.9 6.2 52 39-93 9-70 (97)
143 1x4h_A RNA-binding protein 28; 25.6 1.7E+02 0.0059 20.4 7.6 54 37-93 14-76 (111)
144 2dnq_A RNA-binding protein 4B; 25.6 1.5E+02 0.0052 19.7 6.3 53 38-93 8-61 (90)
145 2fy1_A RNA-binding motif prote 25.3 1.1E+02 0.0039 21.8 4.9 51 40-93 9-67 (116)
146 2dgt_A RNA-binding protein 30; 25.1 1.6E+02 0.0054 19.7 6.2 52 39-93 11-63 (92)
147 1wi8_A EIF-4B, eukaryotic tran 25.1 1.7E+02 0.0057 20.2 5.7 57 32-92 9-75 (104)
148 2jwn_A Embryonic polyadenylate 25.0 98 0.0034 22.4 4.6 48 42-92 40-96 (124)
149 2d9o_A DNAJ (HSP40) homolog, s 25.0 1.3E+02 0.0046 20.9 5.0 40 54-93 30-73 (100)
150 2jrs_A RNA-binding protein 39; 25.0 1.8E+02 0.0062 20.4 6.2 50 40-92 28-86 (108)
151 2ywk_A Putative RNA-binding pr 25.0 1.3E+02 0.0043 20.3 5.0 51 40-93 18-76 (95)
152 2dnh_A Bruno-like 5, RNA bindi 24.9 1.7E+02 0.0059 20.1 6.3 53 38-93 15-75 (105)
153 1rk8_A CG8781-PA, CG8781-PA pr 24.8 1.5E+02 0.0052 22.8 5.9 50 41-93 75-133 (165)
154 2jvo_A Nucleolar protein 3; nu 24.7 1.4E+02 0.0048 21.0 5.2 50 41-93 34-84 (108)
155 2dgx_A KIAA0430 protein; RRM d 24.6 1.7E+02 0.0058 19.9 6.8 51 40-93 11-71 (96)
156 2cpf_A RNA binding motif prote 24.3 1.7E+02 0.0058 19.8 6.1 51 40-93 7-69 (98)
157 1wg5_A Heterogeneous nuclear r 23.7 1.9E+02 0.0063 20.1 6.4 56 40-98 17-81 (104)
158 1wf0_A TDP-43, TAR DNA-binding 23.7 74 0.0025 21.2 3.5 47 41-90 8-58 (88)
159 1whv_A Poly(A)-specific ribonu 23.7 89 0.003 21.9 3.6 39 55-93 29-68 (100)
160 1uaw_A Mouse-musashi-1; RNP-ty 23.7 97 0.0033 19.8 4.0 50 42-94 4-62 (77)
161 3ijw_A Aminoglycoside N3-acety 23.5 42 0.0014 28.8 2.4 23 394-416 64-86 (268)
162 2dis_A Unnamed protein product 23.4 1.7E+02 0.0056 20.4 5.5 51 40-93 10-71 (109)
163 4a8x_A RNA-binding protein wit 22.6 1.7E+02 0.0058 19.2 6.0 49 42-93 8-66 (88)
164 1x5u_A Splicing factor 3B subu 22.4 1.9E+02 0.0067 19.8 8.2 52 39-93 16-76 (105)
165 3ulh_A THO complex subunit 4; 22.4 1.9E+02 0.0065 20.0 5.6 51 40-93 31-89 (107)
166 2dgp_A Bruno-like 4, RNA bindi 22.0 2E+02 0.0068 19.8 6.3 52 39-93 14-74 (106)
167 1p1t_A Cleavage stimulation fa 21.9 1.2E+02 0.0041 20.9 4.4 50 41-93 11-69 (104)
168 2bz2_A Negative elongation fac 21.9 1.1E+02 0.0038 22.2 4.3 49 40-93 41-92 (121)
169 3ucg_A Polyadenylate-binding p 21.8 1.4E+02 0.0049 19.7 4.7 48 42-92 10-66 (89)
170 4f02_A Polyadenylate-binding p 21.8 1.4E+02 0.0048 24.2 5.4 55 36-93 13-76 (213)
171 2adc_A Polypyrimidine tract-bi 21.7 2.3E+02 0.0078 23.3 6.8 51 40-92 36-90 (229)
172 2cpj_A Non-POU domain-containi 21.3 1.6E+02 0.0055 20.0 4.9 52 39-93 16-70 (99)
173 1ghh_A DINI, DNA-damage-induci 21.2 1.5E+02 0.0052 19.8 4.3 37 56-92 24-68 (81)
174 2a3j_A U1 small nuclear ribonu 20.8 2E+02 0.0067 21.1 5.5 54 40-93 31-91 (127)
175 2nyg_A YOKD protein; PFAM02522 20.8 49 0.0017 28.5 2.3 23 394-416 62-84 (273)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=1.5e-79 Score=605.07 Aligned_cols=464 Identities=25% Similarity=0.397 Sum_probs=356.5
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171 28 SYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT 107 (509)
Q Consensus 28 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~ 107 (509)
+++.++||||+++|++||++++...+++..+.+|++||||||++++|+.++|+|+||+++++|+.++...|..++.....
T Consensus 6 ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~ 85 (479)
T 3tbg_A 6 SSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85 (479)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGG
T ss_pred CCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHH
Confidence 34457999999999999999986678889999999999999999999999999999999999999888888888765554
Q ss_pred hcccc--CCcceEecCCchhHHHHHHHHHHhhcchhhhhc--cccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHH
Q 038171 108 QRLTY--NGLDLIFSPYGEYWREIRKICVVHLFNSIRAQN--FRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCN 183 (509)
Q Consensus 108 ~~~~~--~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~ 183 (509)
..... .+.+++++.+|+.|+++|+. +.+.|+...+.. +.+.+......+...+.. ..++.+|+..++..++++
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~ 162 (479)
T 3tbg_A 86 QILGFGPRSQGVFLARYGPAWREQRRF-SVSTLRNLGLGKKSLEQWVTEEAACLCAAFAN--HSGRPFRPNGLLDKAVSN 162 (479)
T ss_dssp GGGTCBTTBCCSTTCCSSHHHHHHHHH-HHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHT--TTTCCBCTHHHHHHHHHH
T ss_pred HHhccCCCCCceeeCCCCHHHHHHHHH-HHHHhcchhhhHHHHHHHHHHHHHHHHHHHHh--ccCCcccHHHHHHHHHHH
Confidence 44332 23456677789999999998 677776665543 344555555555555543 356789999999999999
Q ss_pred HHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhh--ccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 038171 184 TICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAF--FVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH 261 (509)
Q Consensus 184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (509)
+++.++||.+++..+. ................... ......|+..++. ....+.....+...+.+.+.+++.
T Consensus 163 ~~~~~~fg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 236 (479)
T 3tbg_A 163 VIASLTCGRRFEYDDP---RFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIP---ALAGKVLRFQKAFLTQLDELLTEH 236 (479)
T ss_dssp HHHHHHHSCCCCTTCH---HHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSH---HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCcccccch---hhhhhhhhhhhhhhhhhhhhhhhhcccchhccch---hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887431 1222222222222211111 1111223322221 223334444455556666666555
Q ss_pred cCccccccccCcchHHHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHH
Q 038171 262 LDPKRTKADMQQEDLVDVLLQIRKHR--GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIR 339 (509)
Q Consensus 262 ~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~ 339 (509)
.+..+..... .|+++.++...... .....++++++.++++++++||+|||+++++|++++|++||++|+||++||+
T Consensus 237 ~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~ 314 (479)
T 3tbg_A 237 RMTWDPAQPP--RDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEID 314 (479)
T ss_dssp HHHCCTTSCC--CSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHhhhccccc--chhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4443322222 66777666554322 2235799999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCC
Q 038171 340 SLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEF 419 (509)
Q Consensus 340 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F 419 (509)
++++.+ +.++.+++.+||||+|||+||||+||++|...+|.+.+|++++||.|||||.|+++.+++||||++|+||++|
T Consensus 315 ~~~~~~-~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F 393 (479)
T 3tbg_A 315 DVIGQV-RRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRF 393 (479)
T ss_dssp HHTCSS-SCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred HHHhhc-cccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCcccc
Confidence 999866 6799999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceE
Q 038171 420 NPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLV 499 (509)
Q Consensus 420 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (509)
+||||++++.... ++..|+|||+|+|+|+|++||++|+++++|.||++|+|+++++.. ........+++..|+ +++
T Consensus 394 ~PeRfl~~~~~~~-~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~P~-~~~ 469 (479)
T 3tbg_A 394 HPEHFLDAQGHFV-KPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP--RPSHHGVFAFLVSPS-PYE 469 (479)
T ss_dssp CGGGGBCTTCCBC-CCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSC--CCCSCEEESSSEEEC-CCC
T ss_pred CccccCCCCcccC-CCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCC--CccccccceeeecCC-CeE
Confidence 9999998765432 457799999999999999999999999999999999999987643 223344567788886 799
Q ss_pred EEEeeccc
Q 038171 500 LLAKYHEY 507 (509)
Q Consensus 500 ~~~~~~~~ 507 (509)
++++||.-
T Consensus 470 v~~~pRs~ 477 (479)
T 3tbg_A 470 LCAVPRHH 477 (479)
T ss_dssp BEEEEC--
T ss_pred EEEEECCC
Confidence 99999964
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-80 Score=612.11 Aligned_cols=468 Identities=23% Similarity=0.434 Sum_probs=360.5
Q ss_pred cCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhh
Q 038171 27 SSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVA 106 (509)
Q Consensus 27 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~ 106 (509)
++...+.||||+++|++||++.+ .++++..+.+|+++||+||++++|+.++|+|+||+++++|+.++...|..++....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~ 82 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFAS 82 (507)
T ss_dssp -------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchH
Confidence 34556789999999999999998 67889999999999999999999999999999999999999888778887776544
Q ss_pred hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhc------cccchHHHHHHHHHHHHHhhccCCccchHHHHHHh
Q 038171 107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQN------FRPIREDEVSRMIESISKSAAASKQVNLSEKTMSL 180 (509)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~------~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~ 180 (509)
..... .+.+++++.+|+.|+++||. +.+.|+...... +.+.+.++++.+++.+.+...++.++|+.+++..+
T Consensus 83 ~~~~~-~g~~l~~~~~g~~w~~~R~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~ 160 (507)
T 3pm0_A 83 FRVVS-GGRSMAFGHYSEHWKVQRRA-AHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVA 160 (507)
T ss_dssp HHHGG-GGTCSSSSCSSHHHHHHHHH-HHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHH
T ss_pred HHhhc-CCCceEECCCChHHHHHHHH-HHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHH
Confidence 33322 34566677779999999998 677666544443 88899999999999998766667899999999999
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhh-hhhHHHHHHHHHHHHHHHHHHHHH
Q 038171 181 SCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDK-LTGMMRRLENNVQESDRFYQELID 259 (509)
Q Consensus 181 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~ 259 (509)
++|+++.++||.+++..+ +....+...+..+............+|++.+++. +....++..+..+.+.+++.+.++
T Consensus 161 ~~dvi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (507)
T 3pm0_A 161 VANVMSAVCFGCRYSHDD---PEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFL 237 (507)
T ss_dssp HHHHHHHHHTSCCCCTTC---HHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccccCCCCC---HHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987632 1222233333344333333344556777766532 122456677778888888988888
Q ss_pred hhcCccccccccCcchHHHHHHHHHHhcCC------CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHH
Q 038171 260 EHLDPKRTKADMQQEDLVDVLLQIRKHRGF------KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKK 333 (509)
Q Consensus 260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~ 333 (509)
++++....+... .|+++.|++..+.... ...++++++.++++.+++||+|||+++++|++++|++||++|++
T Consensus 238 ~~~~~~~~~~~~--~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~k 315 (507)
T 3pm0_A 238 RHCESLRPGAAP--RDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTR 315 (507)
T ss_dssp HHHHHCCTTCCC--CSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHhccccccCC--ccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHH
Confidence 877654332222 7999999976543211 12589999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCC
Q 038171 334 VQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413 (509)
Q Consensus 334 l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 413 (509)
|++||+++++.+ +.++++++.+||||+|||+||||++|++|..++|.+.+|++++||.|||||.|+++.+++||||++|
T Consensus 316 l~~Ei~~~~~~~-~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~ 394 (507)
T 3pm0_A 316 VQAELDQVVGRD-RLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW 394 (507)
T ss_dssp HHHHHHHHTCTT-SCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTC
T ss_pred HHHHHHHhcCCC-CCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccC
Confidence 999999999865 6789999999999999999999999999987889999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCC-CCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCcee
Q 038171 414 ENPEEFNPERFIDRSVDFKG-KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITV 492 (509)
Q Consensus 414 ~dp~~F~P~R~l~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (509)
+||++|+||||++++..... .+..++|||+|+|+|||++||++|++++++.||++|++++.++. +++.....+++.
T Consensus 395 ~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~ 471 (507)
T 3pm0_A 395 PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE---PAKMNFSYGLTI 471 (507)
T ss_dssp SSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTC---CSCCCEEESSSE
T ss_pred CCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCC---CCCCCCCCCccc
Confidence 99999999999986543211 23578999999999999999999999999999999999987653 334444567777
Q ss_pred eeccceEEEEeeccc
Q 038171 493 HKKNFLVLLAKYHEY 507 (509)
Q Consensus 493 ~~~~~~~~~~~~~~~ 507 (509)
.|+ ++.|++++|.=
T Consensus 472 ~p~-~~~v~~~~R~~ 485 (507)
T 3pm0_A 472 KPK-SFKVNVTLRES 485 (507)
T ss_dssp EEC-SCCEEEEESSC
T ss_pred cCC-CcEEEEEEccc
Confidence 777 46999999863
No 3
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=3.4e-79 Score=603.93 Aligned_cols=464 Identities=25% Similarity=0.438 Sum_probs=374.2
Q ss_pred CCCCCCCCCCCCCcccccccCCCC-CCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhh
Q 038171 28 SYASSLPPGPKGLPFIGNLHQFDS-SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVA 106 (509)
Q Consensus 28 ~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~ 106 (509)
+...+.||||+++|++||++.+.. .+++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|..++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 345678999999999999998843 3567889999999999999999999999999999999999998888988887654
Q ss_pred hhccccCCcceEecCCchhHHHHHHHHHHhhcch--hhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHH
Q 038171 107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNS--IRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNT 184 (509)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~v 184 (509)
.......+.+++++.+|+.|+++||+ +.+.|+. .....+.+.++++++.+++.+.. .+++++|+..++..+++|+
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dv 160 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRL-AMATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNV 160 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHH-HHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHH-HHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHH
Confidence 44333335566677679999999998 6777763 45677899999999999999875 3567899999999999999
Q ss_pred HHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCc
Q 038171 185 ICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDP 264 (509)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (509)
|+.++||.+++..+ +....+......+........+.+++|++.+++. ...++..+..+...+++..+++++++.
T Consensus 161 i~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 235 (494)
T 3swz_A 161 ISLICFNTSYKNGD---PELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN--KTLEKLKSHVKIRNDLLNKILENYKEK 235 (494)
T ss_dssp HHHHHHSCCCCTTC---THHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC--SHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHcCCcCCCCC---HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc--HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999886532 1222233333333333333445667788776542 234556667777888888888887765
Q ss_pred cccccccCcchHHHHHHHHHHhcC--------CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHH
Q 038171 265 KRTKADMQQEDLVDVLLQIRKHRG--------FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQE 336 (509)
Q Consensus 265 ~~~~~~~~~~d~l~~ll~~~~~~~--------~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~ 336 (509)
...+. ..|+++.|+++..+.. ....++++++..++.++++||+|||+++++|++++|+.||++|+++++
T Consensus 236 ~~~~~---~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~ 312 (494)
T 3swz_A 236 FRSDS---ITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYE 312 (494)
T ss_dssp CCTTC---CCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hcccc---hhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 43221 2799999999865321 123589999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCC
Q 038171 337 EIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENP 416 (509)
Q Consensus 337 Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp 416 (509)
||+++++.+ +.++++++.+||||+|||+||||++|++|..++|.+.+|++++||.|||||.|+++.+++||||++|+||
T Consensus 313 Ei~~v~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp 391 (494)
T 3swz_A 313 EIDQNVGFS-RTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQP 391 (494)
T ss_dssp HHHHHTCSS-SCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSST
T ss_pred HHHHhcCCC-CCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCc
Confidence 999999875 6789999999999999999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCC-CCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeec
Q 038171 417 EEFNPERFIDRSVDF-KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKK 495 (509)
Q Consensus 417 ~~F~P~R~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (509)
++||||||++++... ..+...++|||+|+|.|+|++||++|++++++.||++|+|+++++.+ ..+.....+++..|+
T Consensus 392 ~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~p~ 469 (494)
T 3swz_A 392 DQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ--LPSLEGIPKVVFLID 469 (494)
T ss_dssp TSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCC--CCCCSCEESSSEECC
T ss_pred ccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCC--CCCCCCccceeecCC
Confidence 999999999865432 22456799999999999999999999999999999999999876543 223344456777775
Q ss_pred cceEEEEeecc
Q 038171 496 NFLVLLAKYHE 506 (509)
Q Consensus 496 ~~~~~~~~~~~ 506 (509)
++++++++|.
T Consensus 470 -~~~v~~~~R~ 479 (494)
T 3swz_A 470 -SFKVKIKVRQ 479 (494)
T ss_dssp -CCCEEEEECH
T ss_pred -CcEEEEEEcC
Confidence 7899999985
No 4
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=1.9e-79 Score=604.95 Aligned_cols=460 Identities=23% Similarity=0.367 Sum_probs=356.8
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhC-CccccCCCchhh
Q 038171 28 SYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAH-DLQFSGRPASVA 106 (509)
Q Consensus 28 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~-~~~~~~~~~~~~ 106 (509)
+.+++.+|||+++|++||++.+ ..+++.++.+|+++|||||++++|+.++|+|+||+++++++.++ ...|..++....
T Consensus 10 ~~k~~~~PGP~~~PliGn~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~ 88 (485)
T 3nxu_A 10 LFKKLGIPGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP 88 (485)
T ss_dssp HHHHHTCCCCCCBTTTBTGGGG-GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred HHhhCCCCCCCCcCeecCcHHh-hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence 3345568999999999999998 66788889999999999999999999999999999999999876 456665554322
Q ss_pred hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHH
Q 038171 107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTIC 186 (509)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~ 186 (509)
.. ..+ +.++..+|+.|+++||. +.+.|+.+.++.+.+.++++++.+++.+.+...+++++|+.+++..+++|+|+
T Consensus 89 ~~---~~~-~~l~~~~g~~w~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~ 163 (485)
T 3nxu_A 89 VG---FMK-SAISIAEDEEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVIT 163 (485)
T ss_dssp CG---GGG-GSTTTCCHHHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHH
T ss_pred cc---ccc-cCccccCCcHHHHHHhh-cChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHH
Confidence 21 112 33556679999999998 78999999999999999999999999998766678899999999999999999
Q ss_pred HHHhcCCCCCCccchhhhhHHHHHHHHHHHhhh---hhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038171 187 RLAFGKRSDGNEEAISGRSRFHTLLSEIQALSI---AFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLD 263 (509)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 263 (509)
.++||.+++..+. ..+.+.+.+........ .......+|++..+..............+.+.+.++..++++.+
T Consensus 164 ~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T 3nxu_A 164 STSFGVNIDSLNN---PQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 240 (485)
T ss_dssp HHHHSCCCCGGGC---TTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCccccccC---CCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999886431 12233322222111000 00111233433322111000000112223344445555544432
Q ss_pred ccccccccCcchHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHh
Q 038171 264 PKRTKADMQQEDLVDVLLQIRKHRG--FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSL 341 (509)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~ 341 (509)
.. .. ...|+++.|+++..+.. ....++++++.++++.+++||+|||+++++|++++|++||++|++|++||+++
T Consensus 241 ~~---~~-~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~ 316 (485)
T 3nxu_A 241 DT---QK-HRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAV 316 (485)
T ss_dssp CC-------CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cc---CC-CcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 21 11 12799999998764321 12468999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCC
Q 038171 342 VGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP 421 (509)
Q Consensus 342 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P 421 (509)
++.+ +.++++++.+||||+|||+|+||++|+++. ++|.+++|++++||.|||||.|+++.+++||||++|+||++|||
T Consensus 317 ~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~P 394 (485)
T 3nxu_A 317 LPNK-APPTYDTVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLP 394 (485)
T ss_dssp STTT-CCCCHHHHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCG
T ss_pred hccC-CCCCHHHHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCc
Confidence 9876 679999999999999999999999999997 78999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEE
Q 038171 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL 501 (509)
Q Consensus 422 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (509)
|||++++... ..+..++|||+|+|.|+|++||++|++++++.|+++|+|++.++.. .+.....+.+..|+++++++
T Consensus 395 eR~l~~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~ 470 (485)
T 3nxu_A 395 ERFSKKNKDN-IDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLK 470 (485)
T ss_dssp GGGSHHHHTT-SCTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCC---SSCCBCSSSSCCBSSCCEEE
T ss_pred cccCCCcccc-CCCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCC---CCcccCCCeeccCCCCeEEE
Confidence 9999754322 2456799999999999999999999999999999999999876542 22333456678898999999
Q ss_pred Eeecc
Q 038171 502 AKYHE 506 (509)
Q Consensus 502 ~~~~~ 506 (509)
+++|.
T Consensus 471 ~~~r~ 475 (485)
T 3nxu_A 471 VESRD 475 (485)
T ss_dssp EEEC-
T ss_pred EEEcc
Confidence 99986
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=8.1e-78 Score=593.19 Aligned_cols=451 Identities=19% Similarity=0.339 Sum_probs=362.9
Q ss_pred CCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc
Q 038171 28 SYASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA 103 (509)
Q Consensus 28 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~ 103 (509)
.++...+|||+++|++||++.+. .++++..+.+|+++|||||++++|+.++|+|+||+++++|+.++ ..|.+++.
T Consensus 20 ~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~ 98 (482)
T 3k9v_A 20 TRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLE 98 (482)
T ss_dssp CEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCC
T ss_pred cCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCC
Confidence 34566789999999999998773 23567889999999999999999999999999999999999874 45666654
Q ss_pred hhhh---hccccCCcceEecCCchhHHHHHHHHHHhh-cchhhhhccccchHHHHHHHHHHHHHhhc-cCCccchHHHHH
Q 038171 104 SVAT---QRLTYNGLDLIFSPYGEYWREIRKICVVHL-FNSIRAQNFRPIREDEVSRMIESISKSAA-ASKQVNLSEKTM 178 (509)
Q Consensus 104 ~~~~---~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~-f~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~ 178 (509)
...+ ......+ .++++.+|+.|+++||. +.+. ++...++.+.+.++++++.+++.+.+... +++++|+.+++.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~g~~w~~~Rr~-~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~ 176 (482)
T 3k9v_A 99 IKPWKAYRDHRNEA-YGLMILEGQEWQRVRSA-FQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELN 176 (482)
T ss_dssp CHHHHHHHHHHTCC-CCTTTCCHHHHHHHHHH-HHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHH
T ss_pred chHHHHHHHhcCCC-CCceeCCCchHHHHHHH-hhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence 3221 1111123 34555679999999999 4555 58888999999999999999999987643 467899999999
Q ss_pred HhHHHHHHHHHhcCCCCCCccch-hhhhHHHHHHHHHHHhhhhhccccccc--hhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 038171 179 SLSCNTICRLAFGKRSDGNEEAI-SGRSRFHTLLSEIQALSIAFFVTDYSP--FMGWIDKLTGMMRRLENNVQESDRFYQ 255 (509)
Q Consensus 179 ~~~~~vi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (509)
.+++|+|+.++||.+++..+... .....+.+.+..+..... ....+| ++.++. ....++..+..+.+.+++.
T Consensus 177 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~l~--~~~~~~~~~~~~~~~~~~~ 251 (482)
T 3k9v_A 177 KWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFG---KMMVTPVELHKRLN--TKVWQAHTLAWDTIFKSVK 251 (482)
T ss_dssp HHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGG---GGSSSCHHHHHHHT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHH---HHHhhhHHHHHhcC--CHHHHHHHHHHHHHHHHHH
Confidence 99999999999999987643211 233455555555443322 222333 222221 1334555666677778888
Q ss_pred HHHHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHH
Q 038171 256 ELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQ 335 (509)
Q Consensus 256 ~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~ 335 (509)
+.+++++++...+. ..|++..++.. ..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus 252 ~~i~~r~~~~~~~~---~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~ 321 (482)
T 3k9v_A 252 PCIDNRLQRYSQQP---GADFLCDIYQQ-------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLL 321 (482)
T ss_dssp HHHHHHHHHTTTCT---TSCHHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHhccCC---chHHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHH
Confidence 88887765432211 16788777763 258999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCC
Q 038171 336 EEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWEN 415 (509)
Q Consensus 336 ~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~d 415 (509)
+||+++++.+ +.++++++.+||||+|||+||||++|++|. ++|.+.+|++++||.|||||.|+++.+++||||++|+|
T Consensus 322 ~Ei~~v~~~~-~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~ 399 (482)
T 3k9v_A 322 QEVQSVLPDN-QTPRAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFED 399 (482)
T ss_dssp HHHHHHSCTT-CCCCGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSS
T ss_pred HHHHHHhCCC-CCCCHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCCccCCC
Confidence 9999999876 578999999999999999999999999997 68999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeec
Q 038171 416 PEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKK 495 (509)
Q Consensus 416 p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (509)
|++||||||++++.. ..+..++|||+|+|+|+|++||++|++++++.||++|++++.++. ++ ......+..|+
T Consensus 400 p~~F~PeRfl~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~--~~~~~~~~~p~ 472 (482)
T 3k9v_A 400 SHKFRPERWLQKEKK--INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNE---PV--EMLHLGILVPS 472 (482)
T ss_dssp TTSCCGGGGTCTTSC--CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCC---CC--CEEESSSEEES
T ss_pred cCccCccccCCCCCC--CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCC---Cc--ccccceeecCC
Confidence 999999999986542 356789999999999999999999999999999999999986653 32 33456778999
Q ss_pred cceEEEEeec
Q 038171 496 NFLVLLAKYH 505 (509)
Q Consensus 496 ~~~~~~~~~~ 505 (509)
.++.+++++|
T Consensus 473 ~~~~~~~~~R 482 (482)
T 3k9v_A 473 RELPIAFRPR 482 (482)
T ss_dssp SSCCEEEEEC
T ss_pred CCcceEEeeC
Confidence 9999999987
No 6
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=2.8e-77 Score=588.22 Aligned_cols=459 Identities=28% Similarity=0.424 Sum_probs=364.0
Q ss_pred CCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171 28 SYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT 107 (509)
Q Consensus 28 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~ 107 (509)
+.+.+.||||+++|++||++.+...+++..+.+|+++||+||++++|+.++++|+||+++++|+.++...|..++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 34567899999999999999986678889999999999999999999999999999999999999877777766554333
Q ss_pred hccccCCcceEecCCchhHHHHHHHHHHhhcchhhh--hccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHH
Q 038171 108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRA--QNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTI 185 (509)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi 185 (509)
.... +. .++..+|+.|+++||. ..+.++...+ ..+.+.++++++.+++.+.+. .++++|+..++..+++|+|
T Consensus 86 ~~~~--~~-~l~~~~g~~w~~~Rr~-~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~dvi 159 (476)
T 3e6i_A 86 HAHR--DR-GIIFNNGPTWKDIRRF-SLTTLRNYGMGKQGNESRIQREAHFLLEALRKT--QGQPFDPTFLIGCAPCNVI 159 (476)
T ss_dssp GGGT--TS-SSTTCCSTTHHHHHHH-HHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHTHHHHHHH
T ss_pred heec--CC-CEEecCCcHHHHHHHH-HHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh--CCCCcChHHHHHHHHHHHH
Confidence 3222 22 4555579999999997 5666654433 345688889999999998753 4678999999999999999
Q ss_pred HHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhh--ccccccc-hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171 186 CRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAF--FVTDYSP-FMGWIDKLTGMMRRLENNVQESDRFYQELIDEHL 262 (509)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (509)
+.++||.+++..+ .....+...+.......... .....+| ++.++ ....++..+..+.+.+++.+.+++++
T Consensus 160 ~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l---p~~~~~~~~~~~~~~~~~~~~i~~~~ 233 (476)
T 3e6i_A 160 ADILFRKHFDYND---EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYL---PGSHRKVIKNVAEVKEYVSERVKEHH 233 (476)
T ss_dssp HHHHHSCCCCTTC---HHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTS---CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCC---HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHc---CcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999987632 11222333333332222111 1122334 33332 23455667778888899999998877
Q ss_pred CccccccccCcchHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 263 DPKRTKADMQQEDLVDVLLQIRKHRG--FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
+..+.+. . .|+++.|+....+.. ....++++++.++++.+++||+|||+++++|++++|++||++|++|++||++
T Consensus 234 ~~~~~~~--~-~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~ 310 (476)
T 3e6i_A 234 QSLDPNC--P-RDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDR 310 (476)
T ss_dssp HTCCTTS--C-CSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hcCCCCC--C-ccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 6543222 2 789999998765432 2345899999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 038171 341 LVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFN 420 (509)
Q Consensus 341 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~ 420 (509)
+++.+ +.++++++.+||||+|||+||||++|++|..++|.+.+|++++||.|||||.|+++.+++||||++|+||++||
T Consensus 311 ~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~ 389 (476)
T 3e6i_A 311 VIGPS-RIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFK 389 (476)
T ss_dssp HTTTT-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCC
T ss_pred hcCCC-CCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccC
Confidence 99865 67899999999999999999999999999878899999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCC-CCceeeeccceE
Q 038171 421 PERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSL-SGITVHKKNFLV 499 (509)
Q Consensus 421 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 499 (509)
||||++++.... ....++|||+|+|.|+|++||++|++++++.||++|++++..+. .+++.... .+++..|+ +++
T Consensus 390 PeR~l~~~~~~~-~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~--~~~~~~~~~~~~~~~p~-~~~ 465 (476)
T 3e6i_A 390 PEHFLNENGKFK-YSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDP--KDIDLSPIHIGFGCIPP-RYK 465 (476)
T ss_dssp GGGGBCTTSSBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCT--TTCCCSCSEESSSEECC-CCC
T ss_pred chhhcCCCCCcc-CccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCC--CCCCCCcccCccccCCC-CeE
Confidence 999998654322 45679999999999999999999999999999999999975433 23334333 56676665 788
Q ss_pred EEEeecc
Q 038171 500 LLAKYHE 506 (509)
Q Consensus 500 ~~~~~~~ 506 (509)
++++||+
T Consensus 466 ~~~~~R~ 472 (476)
T 3e6i_A 466 LCVIPRS 472 (476)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9999986
No 7
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=7.6e-79 Score=602.31 Aligned_cols=454 Identities=24% Similarity=0.435 Sum_probs=355.6
Q ss_pred ccCCCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh
Q 038171 26 TSSYASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV 105 (509)
Q Consensus 26 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~ 105 (509)
+...+.+.||||++ ++++..++++..+.+|+++|||||++++|+.++|+|+||+++++|+.++...|..++...
T Consensus 23 ~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~ 96 (496)
T 3qz1_A 23 WKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96 (496)
T ss_dssp ------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred hhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence 34456789999986 555556788999999999999999999999999999999999999998877787777654
Q ss_pred hhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHH
Q 038171 106 ATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTI 185 (509)
Q Consensus 106 ~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi 185 (509)
.......+..+++++.+|+.|+++||. +.+.|+.+.++.+.+.++++++.+++.+.. .+++++|+.+++..+++|+|
T Consensus 97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~-~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~dvi 173 (496)
T 3qz1_A 97 SYKLVSQRCQDISLGDYSLLWKAHKKL-TRSALLLGTRSSMEPWVDQLTQEFCERMRV--QAGAPVTIQKEFSLLTCSII 173 (496)
T ss_dssp TTTTSCTTCCCSSSSCCSHHHHHHHHH-HHHHHHC--CCCHHHHHHHHHHHHHHHHHT--TCSCCCHHHHHHTHHHHHHT
T ss_pred hHHHhcCCCCceEECCCCHHHHHHHHH-HHHHHhhccHhhHHHHHHHHHHHHHHHHHh--cCCCccCHHHHHHHHHHHHH
Confidence 433322222244444349999999998 788888777788999999999999999976 35679999999999999999
Q ss_pred HHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhh--hccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038171 186 CRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIA--FFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLD 263 (509)
Q Consensus 186 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 263 (509)
+.++||. .. +.....+.+.+......... ..+...+|++.+++. ...++..+..+.+.+++.+.++++++
T Consensus 174 ~~~~fG~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~~~~ 245 (496)
T 3qz1_A 174 CYLTFGN--KE----DTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN--PGLWRLKQAIENRDHMVEKQLRRHKE 245 (496)
T ss_dssp TTTSTTC--CC----HHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC--CC----ChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh--HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998 11 11222333333322222111 223345666655431 34566777888889999999988876
Q ss_pred ccccccccCcchHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 264 PKRTKADMQQEDLVDVLLQIRKHRGF---KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~~~~---~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
....+. ..|+++.|++...+... ...++++++.++++++++||+|||+++++|++++|++||++|+++++||++
T Consensus 246 ~~~~~~---~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~ 322 (496)
T 3qz1_A 246 SMVAGQ---WRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDR 322 (496)
T ss_dssp SCCSSC---CSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hccCCC---ccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 543221 27899999987543211 126899999999999999999999999999999999999999999999999
Q ss_pred hhCCC---CCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCC
Q 038171 341 LVGGN---KSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPE 417 (509)
Q Consensus 341 ~~~~~---~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~ 417 (509)
+++.+ ++.+ ++++++||||+|||+||||++|++|..++|.+++|++++||.|||||.|+++.+++||||++|+||+
T Consensus 323 ~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~ 401 (496)
T 3qz1_A 323 ELGPGASCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPH 401 (496)
T ss_dssp HHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred HhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcc
Confidence 99863 3556 9999999999999999999999999878999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccc
Q 038171 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNF 497 (509)
Q Consensus 418 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (509)
+||||||++++. ...++|||+|+|+|+|++||++|++++++.|+++|++++.++.+..+++.....+++..|+ +
T Consensus 402 ~F~PeR~l~~~~-----~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 475 (496)
T 3qz1_A 402 EFRPDRFLEPGA-----NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-P 475 (496)
T ss_dssp SCCCCCCC---C-----CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-C
T ss_pred cCCcccccCCCC-----CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-c
Confidence 999999997652 2268999999999999999999999999999999999987653322222222257788877 8
Q ss_pred eEEEEeecc
Q 038171 498 LVLLAKYHE 506 (509)
Q Consensus 498 ~~~~~~~~~ 506 (509)
+++++++|+
T Consensus 476 ~~v~~~~R~ 484 (496)
T 3qz1_A 476 FQVRLQPRG 484 (496)
T ss_dssp CCCCCCCC-
T ss_pred eEEEEEEec
Confidence 999999985
No 8
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=4.2e-77 Score=585.63 Aligned_cols=457 Identities=23% Similarity=0.399 Sum_probs=364.6
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL 110 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 110 (509)
.+.||||+++|++||++.+...+++..+.+|+++|||||++++|+.++++|+||+.+++|+.++...|..++........
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 2fdv_A 9 GKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV 88 (476)
T ss_dssp CBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHH
T ss_pred CCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhh
Confidence 36789999999999999885567788999999999999999999999999999999999997666566655443222211
Q ss_pred ccCCcceEecCCchhHHHHHHHHHHhhcchhhh--hccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171 111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSIRA--QNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL 188 (509)
Q Consensus 111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 188 (509)
. .+.+++ ..+|+.|+++||. +.+.|+...+ +.+.+.+.++++.+++.+... +++++|+.+++..+++|+|+.+
T Consensus 89 ~-~~~~l~-~~~g~~~~~~Rr~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~ 163 (476)
T 2fdv_A 89 F-KGYGVV-FSNGERAKQLRRF-SIATLRDFGVGKRGIEERIQEEAGFLIDALRGT--GGANIDPTFFLSRTVSNVISSI 163 (476)
T ss_dssp H-TTCSSS-SCCHHHHHHHHHH-HHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred c-CCCCeE-ecCchHHHHHHHH-HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHH
Confidence 1 234444 4479999999998 7888987766 678999999999999999753 4568999999999999999999
Q ss_pred HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhh--ccccccch-hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 038171 189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAF--FVTDYSPF-MGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPK 265 (509)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (509)
+||.+++..+ .....+.+.+.......... .+...+|+ +.++ ....++..++.+.+.+++.+.++++++..
T Consensus 164 ~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 237 (476)
T 2fdv_A 164 VFGDRFDYKD---KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL---PGPQQQAFQLLQGLEDFIAKKVEHNQRTL 237 (476)
T ss_dssp HHSSCCCTTC---HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTS---CSHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HcCCcCCCCC---HHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhc---CcHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999887532 12223333333333221110 11224454 2222 23345566777888999999999887653
Q ss_pred ccccccCcchHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhC
Q 038171 266 RTKADMQQEDLVDVLLQIRKHRG--FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVG 343 (509)
Q Consensus 266 ~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~ 343 (509)
+.+ . ..|+++.|+++..+.. .+..++++++.++++++++||+|||+++++|++++|++||++|++|++||+++++
T Consensus 238 ~~~--~-~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~ 314 (476)
T 2fdv_A 238 DPN--S-PRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIG 314 (476)
T ss_dssp CTT--S-CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred CCC--C-CccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhc
Confidence 221 1 1799999998764321 1246899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCc
Q 038171 344 GNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423 (509)
Q Consensus 344 ~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R 423 (509)
.+ +.++++++++||||+|||+|+||++|++|..++|.+.+|++++||.||+||.|+++.+++||||++|+||++|||||
T Consensus 315 ~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR 393 (476)
T 2fdv_A 315 KN-RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393 (476)
T ss_dssp SS-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGG
T ss_pred CC-CCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchh
Confidence 64 66899999999999999999999999999768899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCC-CCCceeeeccceEEEE
Q 038171 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDS-LSGITVHKKNFLVLLA 502 (509)
Q Consensus 424 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 502 (509)
|++++.... .+..++|||+|+|.|+|++||++|++++++.||++|++++.++.. ..+... ..+++..| .++.+++
T Consensus 394 ~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~ 469 (476)
T 2fdv_A 394 FLNEKGQFK-KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK--DIDVSPKHVGFATIP-RNYTMSF 469 (476)
T ss_dssp GBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCSCSEESSSEEC-CCCCEEE
T ss_pred hCCCCCCCC-CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCC--CCCccccccceeecC-CceEEEE
Confidence 997543322 355799999999999999999999999999999999999876542 122333 45777777 5899999
Q ss_pred eecc
Q 038171 503 KYHE 506 (509)
Q Consensus 503 ~~~~ 506 (509)
++|.
T Consensus 470 ~~R~ 473 (476)
T 2fdv_A 470 LPRH 473 (476)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 9985
No 9
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=4.6e-77 Score=585.35 Aligned_cols=454 Identities=26% Similarity=0.445 Sum_probs=363.0
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL 110 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 110 (509)
.+.||||+++|++||++.+...+++..+.+|+++|||||++++|+.++++|+||+.+++|+.++...|..++........
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPI 88 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSC
T ss_pred CCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhh
Confidence 46889999999999999885567889999999999999999999999999999999999997666666655433222221
Q ss_pred ccCCcceEecCCchhHHHHHHHHHHhhcchh--hhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171 111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSI--RAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL 188 (509)
Q Consensus 111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 188 (509)
..+.++ +..+|+.|+++||. +.+.|+.. ..+.+.+.+.++++.+++.+.+. .++++|+.+++..+++|+|+.+
T Consensus 89 -~~~~~l-~~~~g~~w~~~Rr~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~vi~~~ 163 (476)
T 1po5_A 89 -FQGYGV-IFANGERWRALRRF-SLATMRDFGMGKRSVEERIQEEARCLVEELRKS--KGALLDNTLLFHSITSNIICSI 163 (476)
T ss_dssp -CSSCCC-CCSSHHHHHHHHHH-HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT--TTCCBCCHHHHHHHHHHHHHHH
T ss_pred -cCCCce-EecCCcHHHHHHHH-HHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHHHHHH
Confidence 123444 44589999999998 67788776 45678899999999999999763 3578999999999999999999
Q ss_pred HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhh-----ccccccch-hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171 189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAF-----FVTDYSPF-MGWIDKLTGMMRRLENNVQESDRFYQELIDEHL 262 (509)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (509)
+||.+++..+ .++......+...+... .....+|+ +.+ ++...++..++.+.+.+++.+.+++++
T Consensus 164 ~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~---lp~~~~~~~~~~~~~~~~~~~~i~~r~ 234 (476)
T 1po5_A 164 VFGKRFDYKD------PVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKH---FPGTHRQIYRNLQEINTFIGQSVEKHR 234 (476)
T ss_dssp HHSSCCCTTC------HHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHT---SSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCC------HHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHh---cCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887421 23444444333332110 11223453 222 222235566777888899999999887
Q ss_pred CccccccccCcchHHHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 263 DPKRTKADMQQEDLVDVLLQIRKHR--GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
+..+.+ .. .|+++.|+....+. ..+..++++++.+++.++++||+|||+++++|++++|++||++|++|++||++
T Consensus 235 ~~~~~~--~~-~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~ 311 (476)
T 1po5_A 235 ATLDPS--NP-RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQ 311 (476)
T ss_dssp TTCCTT--SC-CSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HhcCCC--Cc-ccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 653221 11 68999998765432 11235889999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 038171 341 LVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFN 420 (509)
Q Consensus 341 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~ 420 (509)
+++.+ +.++++++++||||+|||+||||++|++|+.++|.+++|++++||.||+||.|+++.+++||||++|+||++||
T Consensus 312 ~~~~~-~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~ 390 (476)
T 1po5_A 312 VIGSH-RPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFN 390 (476)
T ss_dssp HTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCC
T ss_pred HhCCC-CCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccC
Confidence 99864 67899999999999999999999999999778899999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCC-CCCceeeeccceE
Q 038171 421 PERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDS-LSGITVHKKNFLV 499 (509)
Q Consensus 421 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 499 (509)
||||++++.... ....++|||+|+|.|+|++||++|++++++.||++|++++.++.. ..+... ..+++..| .++.
T Consensus 391 PeR~l~~~~~~~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~ 466 (476)
T 1po5_A 391 PGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPE--DIDLTPRESGVGNVP-PSYQ 466 (476)
T ss_dssp GGGGBCTTSCBC-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGG--GCCCCCCSTTSSCCC-CCCC
T ss_pred chhhCCCCCCcc-CCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCC--CCCccCCcCceeecC-cceE
Confidence 999997543322 345799999999999999999999999999999999999876532 122333 56777777 5889
Q ss_pred EEEeecc
Q 038171 500 LLAKYHE 506 (509)
Q Consensus 500 ~~~~~~~ 506 (509)
+++++|.
T Consensus 467 v~~~~R~ 473 (476)
T 1po5_A 467 IRFLARH 473 (476)
T ss_dssp BEEEECC
T ss_pred EEEEecC
Confidence 9999985
No 10
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-77 Score=592.43 Aligned_cols=458 Identities=26% Similarity=0.482 Sum_probs=362.7
Q ss_pred CCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccc
Q 038171 32 SLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLT 111 (509)
Q Consensus 32 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~ 111 (509)
..+|||+++|++||++.+ .++++..+.+|+++|||||++++|+.++++|+||+++++|+.++...|..++........
T Consensus 16 p~~PgP~~~p~~G~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~- 93 (495)
T 2hi4_A 16 KSPPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI- 93 (495)
T ss_dssp BCCCCCCCBTTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS-
T ss_pred CCCCCCCCCcceeeHHhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh-
Confidence 344999999999999887 567888999999999999999999999999999999999998776677766654332222
Q ss_pred cCCcceEec-CCchhHHHHHHHHHHhhcchh---hh---h---ccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhH
Q 038171 112 YNGLDLIFS-PYGEYWREIRKICVVHLFNSI---RA---Q---NFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLS 181 (509)
Q Consensus 112 ~~~~~~~~~-~~g~~w~~~Rk~~~~~~f~~~---~~---~---~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~ 181 (509)
..+.+++++ .+|+.|+++||+ +.+.|+.. .. + .+.+.++++++.+++.+.+...+++++|+.+++..++
T Consensus 94 ~~~~~l~~~~~~g~~w~~~Rr~-~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~ 172 (495)
T 2hi4_A 94 TDGQSLTFSTDSGPVWAARRRL-AQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSV 172 (495)
T ss_dssp TTSCCTTTSSCCSHHHHHHHHH-HHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHHH
T ss_pred cCCCCEEEcCCCChHHHHHHHH-HHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHH
Confidence 223445555 469999999998 67765432 22 1 5789999999999999987555677899999999999
Q ss_pred HHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 038171 182 CNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH 261 (509)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (509)
+|+|+.++||.+++..+ .....+.+....+............+|++.+++. ...++..++.+.+.+++.+.++++
T Consensus 173 ~dvi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r 247 (495)
T 2hi4_A 173 ANVIGAMCFGQHFPESS---DEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN--PALQRFKAFNQRFLWFLQKTVQEH 247 (495)
T ss_dssp HHHHHHHHHGGGSCTTC---HHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCC---HHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876421 1112222222333322222223455676654431 234566777888889999999888
Q ss_pred cCccccccccCcchHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHH
Q 038171 262 LDPKRTKADMQQEDLVDVLLQIRKHRG--FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIR 339 (509)
Q Consensus 262 ~~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~ 339 (509)
++....+ . . .|+++.|++...+.. .+..++++++.+++.++++||+|||+++++|++++|++||++|++|++||+
T Consensus 248 ~~~~~~~-~-~-~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~ 324 (495)
T 2hi4_A 248 YQDFDKN-S-V-RDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELD 324 (495)
T ss_dssp HHTCCTT-C-C-CSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHhhccc-c-c-ccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 7643221 1 1 799999997643321 123589999999999999999999999999999999999999999999999
Q ss_pred HhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCC
Q 038171 340 SLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEF 419 (509)
Q Consensus 340 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F 419 (509)
++++.+ +.++++++++||||+|||+||||++|++|..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|
T Consensus 325 ~v~~~~-~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F 403 (495)
T 2hi4_A 325 TVIGRE-RRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEF 403 (495)
T ss_dssp HHTTTS-SCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSC
T ss_pred HhcCCC-CCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCcc
Confidence 999865 6789999999999999999999999999987889999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCC-C-CCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccc
Q 038171 420 NPERFIDRSVD-F-KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNF 497 (509)
Q Consensus 420 ~P~R~l~~~~~-~-~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (509)
|||||++++.. . ...+..++|||+|+|.|+|++||++|++++++.||++|++++.++.. .+.....+++..|++.
T Consensus 404 ~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~ 480 (495)
T 2hi4_A 404 RPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTMKHARC 480 (495)
T ss_dssp CGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCC---CCCCCBCSSSCBCCCC
T ss_pred CcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCC---CCccccCCceecCCCc
Confidence 99999975432 1 01345689999999999999999999999999999999999876542 2334455777888754
Q ss_pred eEEEEeec
Q 038171 498 LVLLAKYH 505 (509)
Q Consensus 498 ~~~~~~~~ 505 (509)
++++++ |
T Consensus 481 ~~v~~~-R 487 (495)
T 2hi4_A 481 EHVQAR-R 487 (495)
T ss_dssp CCBEEE-C
T ss_pred ceEEEE-E
Confidence 477777 6
No 11
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=6.6e-77 Score=584.35 Aligned_cols=460 Identities=26% Similarity=0.447 Sum_probs=364.4
Q ss_pred CCCCCCCCCCCCcccccccCCCCCC--CchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhh
Q 038171 29 YASSLPPGPKGLPFIGNLHQFDSSK--PHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVA 106 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~~~~--~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~ 106 (509)
...+.||||+++|++||++.+.... ++..+.+|+++||||+++++|+.++++|+||+.+++++.++...|..++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 3467899999999999998773232 78889999999999999999999999999999999999887667776654322
Q ss_pred hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhh--hccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHH
Q 038171 107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRA--QNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNT 184 (509)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~v 184 (509)
.... .++.+++++.+|+.|+++||+ +.+.|+...+ ..+.+.++++++.+++.+... +++++|+.+++..+++|+
T Consensus 89 ~~~~-~~~~~~~~~~~g~~w~~~R~~-~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~~d~~~~~~~~~~~v 164 (481)
T 3czh_A 89 FMKM-TKMGGLLNSRYGRGWVDHRRL-AVNSFRYFGYGQKSFESKILEETKFFNDAIETY--KGRPFDFKQLITNAVSNI 164 (481)
T ss_dssp HHHH-HTTCSSTTCCSSHHHHHHHHH-HHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT--TTCCBCCHHHHHHHHHHH
T ss_pred HHhh-cCCCCeEeCCCChHHHHHHHH-HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc--CCCCcCHHHHHHHHHHHH
Confidence 2222 122344556789999999998 7888876544 568899999999999999753 456899999999999999
Q ss_pred HHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhh--ccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171 185 ICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAF--FVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHL 262 (509)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (509)
|+.++||.+++..+ +....+.+.+.......... .+...+|++.+++. ...++..++.+.+.+++.+++++++
T Consensus 165 i~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~ 239 (481)
T 3czh_A 165 TNLIIFGERFTYED---TDFQHMIELFSENVELAASASVFLYNAFPWIGILPF--GKHQQLFRNAAVVYDFLSRLIEKAS 239 (481)
T ss_dssp HHHHHHSSCCCTTC---HHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCC---HHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886421 12223333333333322211 13345676644321 2345667777888899999999887
Q ss_pred CccccccccCcchHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 263 DPKRTKADMQQEDLVDVLLQIRKHRG--FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~~--~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
++...+ . ..|+++.|+++..+.. .+..++++++.+++.++++||+|||+++++|++++|++||++|++|++||++
T Consensus 240 ~~~~~~-~--~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~ 316 (481)
T 3czh_A 240 VNRKPQ-L--PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDL 316 (481)
T ss_dssp TTCCTT-C--CSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HhcCCC-c--hHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 653221 1 2799999998765321 1236899999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 038171 341 LVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFN 420 (509)
Q Consensus 341 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~ 420 (509)
+++.+ +.++++++++||||+|||+|+||++|++|..++|.+++|++++||.||+||.|+++.+++||||++|+||++||
T Consensus 317 ~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~ 395 (481)
T 3czh_A 317 IMGPN-GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFH 395 (481)
T ss_dssp HTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCC
T ss_pred hcCCC-CCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccC
Confidence 99864 67999999999999999999999999999778899999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEE
Q 038171 421 PERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVL 500 (509)
Q Consensus 421 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (509)
||||++++... ..+..++|||+|+|.|+|++||++|++++++.||++|++++.++.. .+.....+++..|+ .+.+
T Consensus 396 PeR~l~~~~~~-~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~-~~~~ 470 (481)
T 3czh_A 396 PERFLDSSGYF-AKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELV---PDLKPRLGMTLQPQ-PYLI 470 (481)
T ss_dssp GGGGBCTTSCB-CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCC---CCCCCCSSSSCCCC-CCCB
T ss_pred CCceeCCCCCC-cCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCC---CCcccCCCceecCC-ceEE
Confidence 99999754321 2456799999999999999999999999999999999999865432 22333457777776 5677
Q ss_pred EEeecc
Q 038171 501 LAKYHE 506 (509)
Q Consensus 501 ~~~~~~ 506 (509)
.++||-
T Consensus 471 ~~~~~~ 476 (481)
T 3czh_A 471 CAERRH 476 (481)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 777774
No 12
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1e-76 Score=583.42 Aligned_cols=454 Identities=28% Similarity=0.451 Sum_probs=352.2
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL 110 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 110 (509)
.+.||||+++|++||++.+...+++..+.+|+++||+||++++|+.+.++|+||+.+++|+.++...|..++........
T Consensus 10 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~ 89 (477)
T 1r9o_A 10 GKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERA 89 (477)
T ss_dssp CBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTT
T ss_pred CCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhc
Confidence 35789999999999998874456788899999999999999999889999999999999997666566654432211111
Q ss_pred ccCCcceEecCCchhHHHHHHHHHHhhcchh--hhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171 111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSI--RAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL 188 (509)
Q Consensus 111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 188 (509)
..+.+ ++..+|+.|+++||. +.+.|+.. .++.+.+.+.++++.+++.+.+. .++++|+.+++..+++|+|+.+
T Consensus 90 -~~~~~-l~~~~g~~w~~~Rr~-~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~~~~vi~~~ 164 (477)
T 1r9o_A 90 -NRGFG-IVFSNGKKWKEIRRF-SLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--KASPCDPTFILGCAPCNVICSI 164 (477)
T ss_dssp -TCTTS-STTCCHHHHHHHHHH-HHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT--TTSCBCTHHHHHHHHHHHHHHH
T ss_pred -cCCCc-eEecCChHHHHHHHH-HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc--CCCccChHHHHHHHHHHHHHHH
Confidence 12334 444579999999998 67788776 45678899999999999999753 3568999999999999999999
Q ss_pred HhcCCCCCCccchhhhhHHHHHHHHHHHhh---hhh--ccccccch-hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171 189 AFGKRSDGNEEAISGRSRFHTLLSEIQALS---IAF--FVTDYSPF-MGWIDKLTGMMRRLENNVQESDRFYQELIDEHL 262 (509)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (509)
+||.+++..+ .++......+...+ ... .+...+|+ +.++ +...++..++.+.+.+++.+.+++++
T Consensus 165 ~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l---p~~~~~~~~~~~~~~~~~~~~i~~r~ 235 (477)
T 1r9o_A 165 IFHKRFDYKD------QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYF---PGTHNKLLKNVAFMKSYILEKVKEHQ 235 (477)
T ss_dssp HHSCCCCTTC------HHHHHHHHHHHHHHHHHTCCBC-------CCCSCC---TTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCcCCCCC------HHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887532 12333333222222 110 11224454 2222 22235566677788899999998877
Q ss_pred CccccccccCcchHHHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 263 DPKRTKADMQQEDLVDVLLQIRKHR--GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
+..+.+ .. .|+++.|+....+. .....++++++.++++++++||+|||+++++|++++|++||++|++|++||++
T Consensus 236 ~~~~~~--~~-~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~ 312 (477)
T 1r9o_A 236 ESMDMN--NP-QDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIER 312 (477)
T ss_dssp HTCCTT--CC-CSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred hccCCC--Cc-hHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 543221 11 68999998754321 11346999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 038171 341 LVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFN 420 (509)
Q Consensus 341 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~ 420 (509)
+++.+ +.++++++++||||+|||+||||++|++|..++|.+.+|++++||.||+||.|.++.+++||||++|+||++||
T Consensus 313 ~~~~~-~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~ 391 (477)
T 1r9o_A 313 VIGRN-RSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFD 391 (477)
T ss_dssp HTCSS-SCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCC
T ss_pred hcCCC-CCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccC
Confidence 99865 67899999999999999999999999999778899999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCC-CCCceeeeccceE
Q 038171 421 PERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDS-LSGITVHKKNFLV 499 (509)
Q Consensus 421 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 499 (509)
||||++++.... ....++|||+|+|+|+|++||++|++++++.||++|++++.++.. ..+... ..+++..| .++.
T Consensus 392 PeR~l~~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~ 467 (477)
T 1r9o_A 392 PHHFLDEGGNFK-KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPK--NLDTTPVVNGFASVP-PFYQ 467 (477)
T ss_dssp GGGGBCTTSCBC-CCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCCCBCCSSSCBC-CCCC
T ss_pred ccceECCCCCcC-ccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCC--CCCccCCcCceeecC-CCeE
Confidence 999997553322 345799999999999999999999999999999999999876532 112233 45677777 5889
Q ss_pred EEEeecc
Q 038171 500 LLAKYHE 506 (509)
Q Consensus 500 ~~~~~~~ 506 (509)
+++++|.
T Consensus 468 ~~~~~R~ 474 (477)
T 1r9o_A 468 LCFIPIH 474 (477)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 9999986
No 13
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.2e-76 Score=587.73 Aligned_cols=447 Identities=22% Similarity=0.313 Sum_probs=356.8
Q ss_pred CCCCCCCCCCCCcccccccCCCC---CCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh
Q 038171 29 YASSLPPGPKGLPFIGNLHQFDS---SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV 105 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~ 105 (509)
.+.+.||||+++|++||++.+.. ...+..+.+|+++|||||++++|+.++|+|+||++++++++++ .|..++...
T Consensus 42 ~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~ 119 (503)
T 3s79_A 42 EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSK 119 (503)
T ss_dssp ---CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCH
T ss_pred hccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhh
Confidence 35678999999999999988721 2344578899999999999999999999999999999999643 455554332
Q ss_pred h-hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHH
Q 038171 106 A-TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNT 184 (509)
Q Consensus 106 ~-~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~v 184 (509)
. .......+.+++++.+|+.|+++||. +.+.|+...++.+.+.+.++++++++.+.+..++++++|+.+++..+++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~-~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~v 198 (503)
T 3s79_A 120 LGLQCIGMHEKGIIFNNNPELWKTTRPF-FMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDT 198 (503)
T ss_dssp HHHHHHTCTTSSSTTCCCHHHHHHHHHH-HHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHH
T ss_pred hhhhhhccCCCceeeCCCccHHHHHHHh-hhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHH
Confidence 2 12222335566777789999999998 689999999999999999999999998876555667899999999999999
Q ss_pred HHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhcc-ccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038171 185 ICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFV-TDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLD 263 (509)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 263 (509)
++.++||.+++. .++...+............ ...++ .+. ...++..++.+.+.+++.+.++++++
T Consensus 199 i~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~ 264 (503)
T 3s79_A 199 SNTLFLRIPLDE--------SAIVVKIQGYFDAWQALLIKPDIFF---KIS---WLYKKYEKSVKDLKDAIEVLIAEKRR 264 (503)
T ss_dssp HHHHHTCCCCCH--------HHHHHHHHHHHHHHHHHTTCCHHHH---HSG---GGTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCcccCc--------hhHHHHHHHHHHHHHHHhcCcHHHh---hcc---hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998752 1222222222222111110 11111 111 12345566777888888888887765
Q ss_pred ccccccc-cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171 264 PKRTKAD-MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV 342 (509)
Q Consensus 264 ~~~~~~~-~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~ 342 (509)
....+.. ....|+++.|+++..++ .++++++.++++++++||+|||+++++|++++|++||++|+|+++||++++
T Consensus 265 ~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~ 340 (503)
T 3s79_A 265 RISTEEKLEECMDFATELILAEKRG----DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVI 340 (503)
T ss_dssp HHHTCTTTTTTCCHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred HhhcccccchHHHHHHHHHHhcccC----CCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence 5432211 11159999999886543 699999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCC
Q 038171 343 GGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPE 422 (509)
Q Consensus 343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~ 422 (509)
++ +.++++++++|||++|||+||||++|++|.. +|.+.+|++++||.|||||.|+++.+++||| ++|+||++||||
T Consensus 341 ~~--~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~Pe 416 (503)
T 3s79_A 341 GE--RDIKIDDIQKLKVMENFIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLE 416 (503)
T ss_dssp TT--SCCCHHHHTTCHHHHHHHHHHHHHSCSSCCE-EEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGG
T ss_pred CC--CCCCHHHHhcCHHHHHHHHhhhccCCCcccc-cccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChh
Confidence 83 6799999999999999999999999999985 5999999999999999999999999999999 999999999999
Q ss_pred cCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccc---eE
Q 038171 423 RFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNF---LV 499 (509)
Q Consensus 423 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 499 (509)
||+++. ....++|||+|+|.|+|++||.+|++++++.|+++|+|+++++...+ +.....+++..|+.. ++
T Consensus 417 Rf~~~~-----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~ 489 (503)
T 3s79_A 417 NFAKNV-----PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVE--SIQKIHDLSLHPDETKNMLE 489 (503)
T ss_dssp GGSSCC-----CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTT--TSCEEESSSEEECTTSCCCC
T ss_pred hcCCCC-----CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCcc--ccccccceeecCCCccceee
Confidence 999753 34569999999999999999999999999999999999988765422 244456888888876 99
Q ss_pred EEEeeccc
Q 038171 500 LLAKYHEY 507 (509)
Q Consensus 500 ~~~~~~~~ 507 (509)
++++||+.
T Consensus 490 v~~~~R~~ 497 (503)
T 3s79_A 490 MIFTPRNS 497 (503)
T ss_dssp EEEEECC-
T ss_pred EEeccCCc
Confidence 99999974
No 14
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=1.7e-77 Score=586.01 Aligned_cols=445 Identities=20% Similarity=0.311 Sum_probs=360.9
Q ss_pred CCCCCCCCCC-CcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171 30 ASSLPPGPKG-LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ 108 (509)
Q Consensus 30 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~ 108 (509)
+.+.||+|++ +|++||++.+ .++++.++.+|++||||||++++|+.++|+|+||+.+++++.++...|..++......
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~-~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~ 87 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT 87 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHh-hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence 3456787764 9999999998 7889999999999999999999999999999999999999998777776665443322
Q ss_pred ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171 109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL 188 (509)
Q Consensus 109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 188 (509)
... .|.+++++.+|+.|+++|+. +.+.|+...++.+.+.+.+.++++++.+. ++.++|+.+.+..+++++++.+
T Consensus 88 ~~~-~g~~~~~~~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~ 161 (461)
T 3ld6_A 88 TPV-FGKGVAYDVPNPVFLEQKKM-LKSGLNIAHFKQHVSIIEKETKEYFESWG----ESGEKNVFEALSELIILTASHC 161 (461)
T ss_dssp HHH-HCTTSGGGSCHHHHHHHHHH-HHHHSSHHHHHHHHHHHHHHHHHHGGGGC----SEEEEEHHHHHHHHHHHHHHHH
T ss_pred hcc-CCCccccCCCcHHHHHHHHh-ccccccHHHHhhhhHHHHHHHHHHHHHHh----hcCCccHHHHHHHHHHHHHHHH
Confidence 222 25667777889999999998 78999999999999999999988887764 3557899999999999999999
Q ss_pred HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171 189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTK 268 (509)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 268 (509)
+||.+++.. ..+.+......+...+... ...+|.+.. .....+..++.+.+.+++.+.+++++.+...
T Consensus 162 ~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~- 229 (461)
T 3ld6_A 162 LHGKEIRSQ-----LNEKVAQLYADLDGGFSHA--AWLLPGWLP----LPSFRRRDRAHREIKDIFYKAIQKRRQSQEK- 229 (461)
T ss_dssp HTCHHHHHT-----CCHHHHHHHHHHHTTSSHH--HHHSCTTSC----CHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HcCcchhhh-----hhhhhhhhhhhhhhhhhhH--HHhhhhhcc----CcHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 999876432 2233333333333222111 111222111 1234455667788888999999887664321
Q ss_pred cccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCC
Q 038171 269 ADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSF 348 (509)
Q Consensus 269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~ 348 (509)
. +|+++.|+++..+++ ..+++++++++++++++||+|||+++++|++++|+.||++|++|++|++++++.....
T Consensus 230 --~--~d~l~~ll~~~~~~~--~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~ 303 (461)
T 3ld6_A 230 --I--DDILQTLLDATYKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPP 303 (461)
T ss_dssp --C--CSHHHHHHTCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCC
T ss_pred --C--cchhhhhHHhhhccc--CCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccc
Confidence 1 789999998654432 4699999999999999999999999999999999999999999999999999987677
Q ss_pred CChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCC
Q 038171 349 VDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRS 428 (509)
Q Consensus 349 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~ 428 (509)
++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||++++
T Consensus 304 ~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~ 382 (461)
T 3ld6_A 304 LTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN 382 (461)
T ss_dssp CCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCC
T ss_pred hhHHHHHHHhhhhheeeeccccCCchhc-cccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCC
Confidence 8999999999999999999999999997 569999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 429 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
.... .+..|+|||+|+|+|+|++||++|++++++.||++|+|+++++..+ . ....+++..|+ ++.|++++|.
T Consensus 383 ~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~-~---~~~~~~~~~p~-~~~v~~~~Rs 454 (461)
T 3ld6_A 383 PASG-EKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFP-T---VNYTTMIHTPE-NPVIRYKRRS 454 (461)
T ss_dssp HHHH-SSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCC-C---BCCSSSSCCBS-SCEEEEEECC
T ss_pred cccC-CCCccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCC-c---ccccceEEcCC-ceEEEEEECC
Confidence 4322 4567999999999999999999999999999999999999876532 1 12234455555 6789999996
No 15
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=7.5e-76 Score=579.53 Aligned_cols=455 Identities=20% Similarity=0.267 Sum_probs=352.6
Q ss_pred CCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc
Q 038171 28 SYASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA 103 (509)
Q Consensus 28 ~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~ 103 (509)
..+.+.+|||++.++. +++.+. ..+++..+.+|++||||||++++|+.++|+|+||+++++|+.++. .|..++.
T Consensus 5 ~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~ 82 (487)
T 3n9y_A 5 PRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFL 82 (487)
T ss_dssp CBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCC
T ss_pred CCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCC
Confidence 3455678999988875 666553 235677899999999999999999999999999999999998654 5666654
Q ss_pred hhhhh--ccccCCcceEecCCchhHHHHHHHHHHh-hcchhhhhccccchHHHHHHHHHHHHHhh----ccCCccchHHH
Q 038171 104 SVATQ--RLTYNGLDLIFSPYGEYWREIRKICVVH-LFNSIRAQNFRPIREDEVSRMIESISKSA----AASKQVNLSEK 176 (509)
Q Consensus 104 ~~~~~--~~~~~~~~~~~~~~g~~w~~~Rk~~~~~-~f~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~vd~~~~ 176 (509)
...+. .....+..++++.+|+.|+++||. +.+ +|+.+.++.+.+.++++++++++.+.+.. +++.++|+.++
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~-l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~ 161 (487)
T 3n9y_A 83 IPPWVAYHQYYQRPIGVLLKKSAAWKKDRVA-LNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDD 161 (487)
T ss_dssp CHHHHHHHHHTTCCCCGGGCCHHHHHHHHHH-HHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHH
T ss_pred CcHHHHHHHHccccCCCccCCcHHHHHHHHh-cCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHH
Confidence 33211 111122345666789999999999 566 69999999999999999999999997643 23457999999
Q ss_pred HHHhHHHHHHHHHhcCCCCCCccch-hhhhHHHHHHHHHHHhhhhhccccccch--hhhhhhhhhHHHHHHHHHHHHHHH
Q 038171 177 TMSLSCNTICRLAFGKRSDGNEEAI-SGRSRFHTLLSEIQALSIAFFVTDYSPF--MGWIDKLTGMMRRLENNVQESDRF 253 (509)
Q Consensus 177 ~~~~~~~vi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~ 253 (509)
+..+++|+|+.++||.+++..+... .....+.+.+..+... ......+|. +.++. ....++..+..+.+.++
T Consensus 162 ~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~l~~~~~--~~~~~~~~~~~~~~~~~ 236 (487)
T 3n9y_A 162 LFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHT---SVPMLNLPPDLFRLFR--TKTWKDHVAAWDVIFSK 236 (487)
T ss_dssp HHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHH---HGGGTTSCHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHH---HHHHHhcCHHHHhhcc--cHHHHHHHHHHHHHHHH
Confidence 9999999999999999998654221 1122333333333322 222233342 22221 12233444444555555
Q ss_pred HHHHHHhhcCcccc--ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHH
Q 038171 254 YQELIDEHLDPKRT--KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVM 331 (509)
Q Consensus 254 ~~~~i~~~~~~~~~--~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q 331 (509)
+.+.++++.++.+. .......|+++.|++. ..++++++.+++.++++||+|||+++++|++++|+.||++|
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~ 309 (487)
T 3n9y_A 237 ADIYTQNFYWELRQKGSVHHDYRGILYRLLGD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQ 309 (487)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhcCCcccchHHHHHHHHhc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHH
Confidence 66666544332211 1111227899998862 26899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCC
Q 038171 332 KKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPE 411 (509)
Q Consensus 332 ~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~ 411 (509)
++|++||+++++.. +.+.++++++||||+|||+||||++|++|. ++|.+++|++++||.||+||.|+++.+++||||+
T Consensus 310 ~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~avi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~ 387 (487)
T 3n9y_A 310 DMLRAEVLAARHQA-QGDMATMLQLVPLLKASIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPT 387 (487)
T ss_dssp HHHHHHHHHHHHHT-TTCHHHHTTSCHHHHHHHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTT
T ss_pred HHHHHHHHHhhccc-ccchhhhhhhCHHHHHHHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcc
Confidence 99999999999865 445699999999999999999999999996 7899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCce
Q 038171 412 AWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGIT 491 (509)
Q Consensus 412 ~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (509)
+|+||++||||||++++.. .....++|||+|+|+|+|++||++|++++++.||++|+|++.++. + +....+++
T Consensus 388 ~~~dp~~F~PeR~l~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~~~~~~~~ 460 (487)
T 3n9y_A 388 FFFDPENFDPTRWLSKDKN--ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS---D--VGTTFNLI 460 (487)
T ss_dssp TSSSTTSCCGGGGTCSCTT--SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC---C--CCEEESSS
T ss_pred cCCCcccCChhhcCCCCCC--CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc---c--cccceeee
Confidence 9999999999999985532 235678999999999999999999999999999999999987652 2 23345788
Q ss_pred eeeccceEEEEeecc
Q 038171 492 VHKKNFLVLLAKYHE 506 (509)
Q Consensus 492 ~~~~~~~~~~~~~~~ 506 (509)
+.|++++.+++++|.
T Consensus 461 ~~p~~~~~~~~~~r~ 475 (487)
T 3n9y_A 461 LMPEKPISFTFWPFN 475 (487)
T ss_dssp EEESSCCCEEEEEC-
T ss_pred ecCCCCceeEEEECC
Confidence 899999999999986
No 16
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=5.2e-75 Score=564.90 Aligned_cols=435 Identities=21% Similarity=0.333 Sum_probs=349.3
Q ss_pred CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171 29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ 108 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~ 108 (509)
++.+.||||+++|++||++.+ ..+++ ++.+++++||+||+++++|.+.++|+||+.+++++.++...|+..... ...
T Consensus 9 ~~~~~pPgp~~~P~iG~~~~~-~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~ 85 (444)
T 2ve3_A 9 NSLPIPPGDFGLPWLGETLNF-LNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL-STR 85 (444)
T ss_dssp CCCCCCCCCCCBTTTBTHHHH-HHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH-HHH
T ss_pred CCCCCCCCCCCCCccccHHHH-hcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH-HHH
Confidence 455789999999999999887 44566 788999999999999988889999999999999998765555422111 111
Q ss_pred ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHH
Q 038171 109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRL 188 (509)
Q Consensus 109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 188 (509)
.. . |...++..+|+.|+++|+. +.+.|++..++.+.+.++++++++++.|. +++++|+.+++..+++++++.+
T Consensus 86 ~~-~-g~~~l~~~~g~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~----~~~~vd~~~~~~~~~~~vi~~~ 158 (444)
T 2ve3_A 86 IL-L-GPNALATQMGEIHRSRRKI-LYQAFLPRTLDSYLPKMDGIVQGYLEQWG----KANEVIWYPQLRRMTFDVAATL 158 (444)
T ss_dssp HH-H-CTTSGGGCCHHHHHHHHHH-HHGGGCHHHHHTTHHHHHHHHHHHHHHHH----HSSEEEHHHHHHHHHHHHHHHH
T ss_pred HH-h-CccccccCCchHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHhc----CCCcEeHHHHHHHHHHHHHHHH
Confidence 11 1 2323445679999999998 78999999999999999999999999985 3568999999999999999999
Q ss_pred HhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccc
Q 038171 189 AFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTK 268 (509)
Q Consensus 189 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 268 (509)
+|| +.... . .++.+.+..+...... +...+|.. ..++..++.+.+.+++.+.+++++++.
T Consensus 159 ~fG-~~~~~-----~-~~~~~~~~~~~~~~~~--~~~~~p~~--------~~~~~~~~~~~~~~~~~~~i~~r~~~~--- 218 (444)
T 2ve3_A 159 FMG-EKVSQ-----N-PQLFPWFETYIQGLFS--LPIPLPNT--------LFGKSQRARALLLAELEKIIKARQQQP--- 218 (444)
T ss_dssp HTC-HHHHS-----C-TTHHHHHHHHHHHHSS--CCCCSTTS--------HHHHHHHHHHHHHHHHHHHHHHHHTSC---
T ss_pred HcC-CCccc-----H-HHHHHHHHHHHHHHhc--CCccCCCc--------HHHHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 999 32211 1 2333333333222111 11122321 123455566778888999998877642
Q ss_pred cccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCC
Q 038171 269 ADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSF 348 (509)
Q Consensus 269 ~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~ 348 (509)
. ...|+++.|+++..+. +..++++++.++++.+++||+|||+++++|++++|++||++|++|++|+++++++. .
T Consensus 219 ~--~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~--~ 292 (444)
T 2ve3_A 219 P--SEEDALGILLAARDDN--NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ--E 292 (444)
T ss_dssp C--CCSSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS--C
T ss_pred C--CccCHHHHHHhccccC--CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC--C
Confidence 1 1279999999764322 24689999999999999999999999999999999999999999999999998753 6
Q ss_pred CChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCC
Q 038171 349 VDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRS 428 (509)
Q Consensus 349 ~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~ 428 (509)
++++++.+||||+|||+||||++|+++. .+|.+.+|++++||.||||+.|.++.+++||||++|+||++||||||++++
T Consensus 293 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~ 371 (444)
T 2ve3_A 293 LTAETLKKMPYLDQVLQEVLRLIPPVGG-GFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDG 371 (444)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTS
T ss_pred CChhhhhcChHHHHHHHHHHhcCCCccC-ccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCC
Confidence 8999999999999999999999999997 569999999999999999999999999999999999999999999999755
Q ss_pred CCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171 429 VDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH 505 (509)
Q Consensus 429 ~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (509)
......++.++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. + ......+..|++++.|++++|
T Consensus 372 ~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~--~~~~~~~~~~~~~l~v~~~~r 443 (444)
T 2ve3_A 372 SATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQN---L--ELVVTPSPRPKDNLRVKLHSL 443 (444)
T ss_dssp TTTTSCTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCC---C--CEEESSSEEETTCCEEEEEEC
T ss_pred cccCCCCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCC---c--ceeccccccCCCCceEEEEeC
Confidence 32223456799999999999999999999999999999999999876532 1 223456788999999999988
No 17
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=2.1e-73 Score=557.03 Aligned_cols=431 Identities=19% Similarity=0.374 Sum_probs=346.4
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh-hcc---ccCCcceEecCCchhH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT-QRL---TYNGLDLIFSPYGEYW 126 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~g~~w 126 (509)
+..++..+.+|+++|||||++++|+.+.|+|+||+++++|+.++ .+..++..... ... ...|.+++++.+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 45668889999999999999999999999999999999999743 34333322111 110 1124455556689999
Q ss_pred HHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhH
Q 038171 127 REIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSR 206 (509)
Q Consensus 127 ~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 206 (509)
+++||. +.+.|+.+.++.+.+.++++++.+++.+....+++.++|+.+++..+++|+++.++||.+++..+. ....
T Consensus 87 ~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~---~~~~ 162 (456)
T 3mdm_A 87 HKQRRV-IDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLG---AQKP 162 (456)
T ss_dssp HHHHHH-HGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT---CCHH
T ss_pred HHHHhh-cccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc---cccH
Confidence 999998 789999999999999999999999999987666677999999999999999999999999876431 2233
Q ss_pred HHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHh
Q 038171 207 FHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKH 286 (509)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 286 (509)
+...+..+....... ..|++.+++......+...+..+.+.+++..+++++++....+.... .|+++.|+++..
T Consensus 163 ~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~-~d~l~~ll~~~~- 236 (456)
T 3mdm_A 163 LSQAVKLMLEGITAS----RNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVP-ADILTQILKAEE- 236 (456)
T ss_dssp HHHHHHHHHHHHHHH----HHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-CCHHHHHHHHTS-
T ss_pred HHHHHHHHHHHHHHH----HHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccch-hhHHHHHHHhcC-
Confidence 444444443322211 11222222211122344556667777788888887765443322222 699999998641
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHh
Q 038171 287 RGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKE 366 (509)
Q Consensus 287 ~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E 366 (509)
..++++++.++++.+++||+|||+++++|++++|++||++|++|++|++++++.+ +.++++++.+||||+|||+|
T Consensus 237 ----~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~l~~lpyl~a~i~E 311 (456)
T 3mdm_A 237 ----GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK-RYLDFEDLGRLQYLSQVLKE 311 (456)
T ss_dssp ----SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-SSCCHHHHHHCHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCC-CCCCHHHHhcCHHHHHHHHH
Confidence 2578899999999999999999999999999999999999999999999999876 67999999999999999999
Q ss_pred hhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCC
Q 038171 367 TMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRR 446 (509)
Q Consensus 367 tlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r 446 (509)
|||++|++|. .+|.+.+|++++||.||+||.|+++.+++||||++|+||++|+||||+++.. .....++|||+|+|
T Consensus 312 ~lRl~p~~~~-~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r 387 (456)
T 3mdm_A 312 SLRLYPPAWG-TFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---KPRFTYFPFSLGHR 387 (456)
T ss_dssp HHHHCCSSCC-EEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC---CCSSSCCTTCCGGG
T ss_pred HHHhCCCccc-cccccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC---CCCCcccCCCCCCc
Confidence 9999999996 5699999999999999999999999999999999999999999999997642 24567999999999
Q ss_pred CCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeeccc
Q 038171 447 ICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEY 507 (509)
Q Consensus 447 ~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (509)
.|+|++||++|++++++.||++|++++.++.. ++. ....+..|++++.+++++|..
T Consensus 388 ~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~--~~~~~~~p~~~~~~~~~~r~~ 443 (456)
T 3mdm_A 388 SCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQR---FGL--QEQATLKPLDPVLCTLRPRGW 443 (456)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHEEEEECTTCC---CCE--EESSSEEESSCCEEEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCc---cee--ecceEEecCCCeEEEEEEcCC
Confidence 99999999999999999999999999887642 222 345678999999999999975
No 18
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=3.8e-74 Score=561.92 Aligned_cols=442 Identities=20% Similarity=0.314 Sum_probs=359.8
Q ss_pred CCCCCCCCC-CcccccccCCCCCCCchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171 31 SSLPPGPKG-LPFIGNLHQFDSSKPHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ 108 (509)
Q Consensus 31 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~ 108 (509)
.+.||||++ +|++||++.+ ..+++.++.+|+++|| +||++++|+.++|+|+||+.+++++.++...|..++......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 80 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF-GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV 80 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH-HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH
T ss_pred CCCCCCCCCCcchhccHHHH-ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH
Confidence 467898665 9999999988 6788999999999999 999999999999999999999999998777777665543322
Q ss_pred ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHH-HHHHhhccCCccchHHHHHHhHHHHHHH
Q 038171 109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIE-SISKSAAASKQVNLSEKTMSLSCNTICR 187 (509)
Q Consensus 109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~~~vd~~~~~~~~~~~vi~~ 187 (509)
... |.+.+++.+++.|+++|+. +.+.|+...++.+.+.+.++++++++ .+.+ .++++|+.+++..+++++++.
T Consensus 81 ~~~--g~~~~~~~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~---~~~~vd~~~~~~~~~~~~i~~ 154 (450)
T 3gw9_A 81 PVF--GEGVAYAAPYPRMREQLNF-LAEELTIAKFQNFVPAIQHEVRKFMAANWDK---DEGEINLLEDCSTMIINTACQ 154 (450)
T ss_dssp HHH--CTTSGGGSCHHHHHHHHHH-HHHTTSGGGCTTHHHHHHHHHHHHHHHHSCS---SEEEEEHHHHHHHHHHHHHHH
T ss_pred HHh--cCCcccCCCcHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcccHHHHHHHHHHHHHHH
Confidence 222 4556666679999999998 78999999999999999999999998 5532 345899999999999999999
Q ss_pred HHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 038171 188 LAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRT 267 (509)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (509)
++||.+++... ....+.+.+..+.... ......+|++.+++. ...++..++.+.+.+++.+.++++++....
T Consensus 155 ~~fG~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~P~l~~lp~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 226 (450)
T 3gw9_A 155 CLFGEDLRKRL----DARRFAQLLAKMESSL--IPAAVFLPILLKLPL--PQSARCHEARTELQKILSEIIIARKEEEVN 226 (450)
T ss_dssp HHSCHHHHHHS----CHHHHHHHHHHHHHTC--CGGGGTCGGGGGSCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCcchhhhh----hhHHHHHHHHHHHhcc--ccchhcccchhccCC--chhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99998765321 1344444444443322 223445677655431 334566777788888999988887643211
Q ss_pred ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHh--hChHHHHHHHHHHHHhhCCC
Q 038171 268 KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLM--KHPRVMKKVQEEIRSLVGGN 345 (509)
Q Consensus 268 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~--~~p~~q~~l~~Ei~~~~~~~ 345 (509)
.... ..|+++.|+++..+. +..++++++.++++.+++||+|||+++++|++++|+ .||++|+++++|++++
T Consensus 227 ~~~~-~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---- 299 (450)
T 3gw9_A 227 KDSS-TSDLLSGLLSAVYRD--GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---- 299 (450)
T ss_dssp TSCC-CCSHHHHHHHCBCTT--SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC----
T ss_pred cCCc-cchHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc----
Confidence 1122 279999999865332 246999999999999999999999999999999999 9999999999999998
Q ss_pred CCCCChhhh-ccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcC
Q 038171 346 KSFVDEDDV-QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERF 424 (509)
Q Consensus 346 ~~~~~~~~~-~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~ 424 (509)
.+.++++++ .+||||+|||+||||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|||||+
T Consensus 300 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~ 378 (450)
T 3gw9_A 300 PAQLNYNNVMDEMPFAERCARESIRRDPPLLM-LMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD 378 (450)
T ss_dssp CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC
T ss_pred cCCCChHHHHHhcHHHHHHHHHHHHhCCchhc-cccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcC
Confidence 256899999 9999999999999999999997 57999999999999999999999999999999999999999999993
Q ss_pred CCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeec-cceEEEEe
Q 038171 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKK-NFLVLLAK 503 (509)
Q Consensus 425 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 503 (509)
.. .+..++|||+|+|.|+|++||++|++++++.||++|+|++.++... + .. ....+..|+ .++.|+++
T Consensus 379 ~~-------~~~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~--~~-~~~~~~~p~~~~~~v~~~ 447 (450)
T 3gw9_A 379 EK-------VEGAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVP-D--PD-YHTMVVGPTASQCRVKYI 447 (450)
T ss_dssp CS-------STTCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCC-C--EE-TTSSSCEECGGGCEEEEE
T ss_pred cC-------CCCceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCC-C--Cc-cccceecCCCCceEeEee
Confidence 21 2467999999999999999999999999999999999998755321 1 11 234667787 89999999
Q ss_pred ecc
Q 038171 504 YHE 506 (509)
Q Consensus 504 ~~~ 506 (509)
+|+
T Consensus 448 ~R~ 450 (450)
T 3gw9_A 448 RRK 450 (450)
T ss_dssp ECC
T ss_pred ecC
Confidence 985
No 19
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=4.3e-73 Score=555.19 Aligned_cols=446 Identities=21% Similarity=0.352 Sum_probs=349.4
Q ss_pred CCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc-
Q 038171 32 SLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL- 110 (509)
Q Consensus 32 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~- 110 (509)
+.+|||+++|++||++.+...+++..+.+|+++|||||++++++.+.++|+||+.+++|+.+. .|..... ......
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 457999999999999988555778889999999999999999999999999999999999643 2322121 111111
Q ss_pred ccCCcceEec-CCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHH
Q 038171 111 TYNGLDLIFS-PYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLA 189 (509)
Q Consensus 111 ~~~~~~~~~~-~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 189 (509)
...+.+++++ .+|+.|+++||. +.+.|++..++.+.+.+.++++++++.+... .+++++|+.+++..+++|+|+.++
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~vd~~~~~~~~~~~vi~~~~ 157 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNI-LLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCG 157 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHH-HGGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHH-hccccCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCeEEHHHHHHHHHHHHHHHHH
Confidence 1113344444 479999999998 7899999999999999999999999998753 235689999999999999999999
Q ss_pred hcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccccc
Q 038171 190 FGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKA 269 (509)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 269 (509)
||.+++..+. .....+.+.+.......... ....|++.++. ....++..+..+.+.+++.+++++++++..
T Consensus 158 fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~--- 228 (470)
T 2ij2_A 158 FNYRFNSFYR--DQPHPFITSMVRALDEAMNK--LQRANPDDPAY--DENKRQFQEDIKVMNDLVDKIIADRKASGE--- 228 (470)
T ss_dssp HSCCCCGGGC--SSCCHHHHHHHHHHHHHHHT--C---CTTSGGG--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred cCCccccccc--CCCCHHHHHHHHHHHHHHHH--HhhhhhHhhcc--chHHHHHHHHHHHHHHHHHHHHHHHHhccc---
Confidence 9998865311 11233434333333221111 01113333322 123455666777888889999988765321
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCC
Q 038171 270 DMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFV 349 (509)
Q Consensus 270 ~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~ 349 (509)
. . .|+++.|+++.++. .+..++++++.++++.+++||+|||+++++|++++|++||++|++|++|++++++. +.+
T Consensus 229 ~-~-~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~--~~~ 303 (470)
T 2ij2_A 229 Q-S-DDLLTHMLNGKDPE-TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD--PVP 303 (470)
T ss_dssp C-C-SSHHHHHHHCCCTT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS--SSC
T ss_pred C-c-hhHHHHHHhccCcc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC--CCC
Confidence 1 1 69999999764321 12369999999999999999999999999999999999999999999999999875 359
Q ss_pred ChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccC-ceeCCCCEEEeehhhhcCCCCCC-CCCCCCCCCcCCCC
Q 038171 350 DEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDG-YEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDR 427 (509)
Q Consensus 350 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g-~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~ 427 (509)
+++++++||||+|||+|+||++|++|. .+|.+.+|++++| |.||+||.|+++.+++||||++| +||++|||||| ++
T Consensus 304 ~~~~~~~lpyl~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~ 381 (470)
T 2ij2_A 304 SYKQVKQLKYVGMVLNEALRLWPTAPA-FSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN 381 (470)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHSCSSCE-EEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS
T ss_pred CHHHHhCCHHHHHHHHHHHhcCCCccc-cceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC
Confidence 999999999999999999999999997 5799999999999 99999999999999999999999 99999999999 32
Q ss_pred CCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 428 SVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 428 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
.. ...+..++|||+|+|.|+|++||++|++++++.||++|+++ .++. .+ +....+++..|+ ++++++++|.
T Consensus 382 ~~--~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~--~~--~~~~~~~~~~p~-~~~v~~~~R~ 452 (470)
T 2ij2_A 382 PS--AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTN--YE--LDIKETLTLKPE-GFVVKAKSKK 452 (470)
T ss_dssp GG--GSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTC--CC--CCEEESSSEEET-TCEEEEEECC
T ss_pred CC--cCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCC--Cc--cccccceEecCC-CeEEEEEEcc
Confidence 11 11346789999999999999999999999999999999998 2221 12 333456778888 9999999985
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=4.1e-74 Score=560.45 Aligned_cols=444 Identities=20% Similarity=0.326 Sum_probs=335.1
Q ss_pred CCCCC-CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc
Q 038171 32 SLPPG-PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL 110 (509)
Q Consensus 32 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~ 110 (509)
+.||| |.++|++||++.+ ..+++..+.+++++||+||++++++.++++|+||+.+++++.++...|..++........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~ 82 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF-RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI 82 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHH
T ss_pred CCCCCCCCCCCCccCHHHH-hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhh
Confidence 57887 8899999999988 678889999999999999999999999999999999999998765556555433221111
Q ss_pred ccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHh
Q 038171 111 TYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAF 190 (509)
Q Consensus 111 ~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~f 190 (509)
. |.+ ++ .+|+.|+++|+. +.+.|++..++.+.+.++++++.+++.+.. ++++|+.+++..+++++++.++|
T Consensus 83 -~-g~~-~~-~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~~~~----~~~vd~~~~~~~~~~~vi~~~~f 153 (455)
T 2cib_A 83 -F-GEG-VV-FDASPERRKEML-HNAALRGEQMKGHAATIEDQVRRMIADWGE----AGEIDLLDFFAELTIYTSSACLI 153 (455)
T ss_dssp -H-C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCS----EEEEEHHHHHHHHHHHHHHHHHT
T ss_pred -c-CCc-cc-cCcHHHHHHHhh-hccccCHHHHHHHHHHHHHHHHHHHHHhCC----CCcEeHHHHHHHHHHHHHHHHHc
Confidence 1 223 33 368999999998 689999999999999999999999988642 35799999999999999999999
Q ss_pred cCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 038171 191 GKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKAD 270 (509)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 270 (509)
|.+++.. ....+.+.+..+..... .....+|++. ....++..++.+.+.+++.+.+++++++.....
T Consensus 154 G~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~- 220 (455)
T 2cib_A 154 GKKFRDQ-----LDGRFAKLYHELERGTD--PLAYVDPYLP-----IESFRRRDEARNGLVALVADIMNGRIANPPTDK- 220 (455)
T ss_dssp CHHHHTT-----CCHHHHHHHHHHHTTCC--GGGGTCTTCS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred CCCcchh-----hhHHHHHHHHHHHhhhh--HHHHhcccCC-----ChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-
Confidence 9887542 12344444444422111 1122334321 122344556777888889999988765432111
Q ss_pred cCcchHHHHHHHHHHhcCCCCC-CCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCC
Q 038171 271 MQQEDLVDVLLQIRKHRGFKVD-LTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFV 349 (509)
Q Consensus 271 ~~~~d~l~~ll~~~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~ 349 (509)
...|+++.|+++..+.+ .. ++++++.++++.+++||+|||+++++|++++|++||++|++|++||+++++.+ +.+
T Consensus 221 -~~~dll~~ll~~~~~~~--~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~ 296 (455)
T 2cib_A 221 -SDRDMLDVLIAVKAETG--TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG-RSV 296 (455)
T ss_dssp --CCCHHHHHHHCBCTTS--SBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGC-CCH
T ss_pred -CcccHHHHHHHhhhhcC--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCC
Confidence 11499999997643322 24 89999999999999999999999999999999999999999999999999865 568
Q ss_pred ChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCC
Q 038171 350 DEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSV 429 (509)
Q Consensus 350 ~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~ 429 (509)
+++++.+||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||++++.
T Consensus 297 ~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~ 375 (455)
T 2cib_A 297 SFHALRQIPQLENVLKETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375 (455)
T ss_dssp HHHTTSCCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTC
T ss_pred CHHHHhcCHHHHHHHHHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCc
Confidence 899999999999999999999999986 6799999999999999999999999999999999999999999999997542
Q ss_pred CCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 430 DFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 430 ~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
.....+..++|||+|+|.|+|++||++|++++++.||++|++++..+. .++. ....+.+..|+.++.+++++|.
T Consensus 376 ~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~-~~~~~~~~~p~~~~~v~~~~R~ 449 (455)
T 2cib_A 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPP--ESYR-NDHSKMVVQLAQPAAVRYRRRT 449 (455)
T ss_dssp HHHHCTTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCG--GGCC-EECSSSSCEECSCCEEEEEEC-
T ss_pred ccccCCccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCc--cccc-cccccccccCCCCceEEEEECc
Confidence 211124579999999999999999999999999999999999986321 1111 1124556778889999999985
No 21
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=3e-73 Score=556.88 Aligned_cols=437 Identities=22% Similarity=0.388 Sum_probs=328.4
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccc-cCCCchhhhhc
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQF-SGRPASVATQR 109 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~-~~~~~~~~~~~ 109 (509)
+..||||+++|++||++.+ ..+++.++.++++ |||||++++|+.++++|+||+.+++++.++ .| ...+.......
T Consensus 22 ~eppPgP~~~P~iG~~~~~-~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~ 97 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRL-ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEG 97 (467)
T ss_dssp CBCCEECCCCSTTHHHHHH-HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC------------
T ss_pred CCCCCCCCCCCcccchHHh-ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHH
Confidence 5568899999999999988 5788899999988 999999999999999999999999999876 34 22222211111
Q ss_pred cccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHH
Q 038171 110 LTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLA 189 (509)
Q Consensus 110 ~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~ 189 (509)
..|...+++.+|+.|+++|+. +.+.|+...++.+.+.++++++++++.+. +++++|+.+++..+++++++.++
T Consensus 98 --~~g~~~l~~~dg~~h~~~R~~-l~~~fs~~~l~~~~~~i~~~~~~l~~~l~----~~~~~d~~~~~~~~~~~vi~~~~ 170 (467)
T 3dbg_A 98 --LLGKEGVATANGPLHRRQRRT-IQPAFRLDAIPAYGPIMEEEAHALTERWQ----PGKTVDATSESFRVAVRVAARCL 170 (467)
T ss_dssp --------------------CGG-GHHHHSTTTSTTTHHHHHHHHHHHHHHSC----TTSCEEHHHHHHHHHHHHHHHHH
T ss_pred --hcCCCCcccCCcHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhc----cCCcCcHHHHHHHHHHHHHHHHH
Confidence 123234566789999999998 78999999999999999999999999874 36789999999999999999999
Q ss_pred hcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccch--hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 038171 190 FGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPF--MGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRT 267 (509)
Q Consensus 190 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (509)
||.+++. .....+...+..+.... ......|+ +.++. ....++..++.+.+.+++.+.+++++++..
T Consensus 171 ~g~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~- 239 (467)
T 3dbg_A 171 LRGQYMD-----ERAERLCVALATVFRGM---YRRMVVPLGPLYRLP--LPANRRFNDALADLHLLVDEIIAERRASGQ- 239 (467)
T ss_dssp SCSSCCH-----HHHHHHHHHHHHHHHC-----------------------------CCHHHHHHHHHHHHHHHTTCCS-
T ss_pred hCCcccc-----hhHHHHHHHHHHHHHHH---HHHhccchhhhhhCC--ChHhHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 9998763 12334444444433321 12223342 12211 123455667778888999999988876421
Q ss_pred ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCC
Q 038171 268 KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKS 347 (509)
Q Consensus 268 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~ 347 (509)
. ..|+++.|+++.++.+ ..++++++.++++.+++||+|||+++++|++++|++||++|++|++|+++++++ +
T Consensus 240 --~--~~dll~~ll~~~~~~~--~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~--~ 311 (467)
T 3dbg_A 240 --K--PDDLLTALLEAKDDNG--DPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG--R 311 (467)
T ss_dssp --S--CCSHHHHHTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT--S
T ss_pred --C--chHHHHHHHhhccCCC--CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--C
Confidence 1 1799999998755432 368999999999999999999999999999999999999999999999999975 5
Q ss_pred CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCC
Q 038171 348 FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDR 427 (509)
Q Consensus 348 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~ 427 (509)
.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+||+++
T Consensus 312 ~~~~~~l~~l~yl~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~ 390 (467)
T 3dbg_A 312 PVAFEDVRKLRHTGNVIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPE 390 (467)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHH
T ss_pred CCCHHHHhhCHHHHHHHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCC
Confidence 68999999999999999999999999987 67999999999999999999999999999999999999999999999975
Q ss_pred CCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171 428 SVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH 505 (509)
Q Consensus 428 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (509)
+... .....++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. .....+++++|+ .+.++..-|
T Consensus 391 ~~~~-~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~-~l~~~~~~~ 461 (467)
T 3dbg_A 391 RAAN-VPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN-----DAVRVGITLRPH-DLLVRPVAR 461 (467)
T ss_dssp HHTT-SCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCE-----EEEEESSSEEEE-ECEEEEEEC
T ss_pred cccc-CCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCC-----CccceeeEecCC-CCccchhhh
Confidence 4321 2456799999999999999999999999999999999999877642 234457888888 666555444
No 22
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=1.8e-72 Score=550.95 Aligned_cols=444 Identities=21% Similarity=0.344 Sum_probs=353.3
Q ss_pred CCCCCCCC-CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171 29 YASSLPPG-PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT 107 (509)
Q Consensus 29 ~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~ 107 (509)
...+.||| |+++|++||++.+ ..+++.++.+|+++||+||++++++++.++|++|+.+++++.++...+...+.....
T Consensus 8 ~~~~~PPg~P~~lP~iG~l~~~-~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 8 AGVKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp --CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCccccHHhh-ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 45678999 8999999999988 678899999999999999999999999999999999999998776555433222111
Q ss_pred hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHH
Q 038171 108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICR 187 (509)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~ 187 (509)
.. ...|.+++++.+|+.|+++||+ +.+.|+...++.+.+.++++++++++.|.. +..+|+.+.+..+++++++.
T Consensus 87 ~~-~~~g~g~~~~~~g~~w~~~Rr~-~~~~f~~~~l~~~~~~~~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~~~~ 160 (461)
T 3i3k_A 87 TT-PVFGKGVAYDVPNPVFLEQKKM-LKSGLNIAHFKQHVSIIEKETKEYFESWGE----SGEKNVFEALSELIILTASH 160 (461)
T ss_dssp HH-HHHCTTSGGGSCHHHHHHHHHH-HHHHSSHHHHHHHHHHHHHHHHHHGGGGCS----EEEEEHHHHHHHHHHHHHHH
T ss_pred hh-hhcCCeeeeCCCcHHHHHHHHH-HhhhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcCHHHHHHHHHHHHHHH
Confidence 11 1124556666679999999998 788999999999999999999999888743 34689999999999999999
Q ss_pred HHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 038171 188 LAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRT 267 (509)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (509)
++||.++... ....+.+.+..+...... ....+|. |+. ....++..++.+.+.+++.+.++++++...
T Consensus 161 ~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~P~--~l~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 228 (461)
T 3i3k_A 161 CLHGKEIRSQ-----LNEKVAQLYADLDGGFSH--AAWLLPG--WLP--LPSFRRRDRAHREIKDIFYKAIQKRRQSQE- 228 (461)
T ss_dssp HHTCHHHHHT-----CCHHHHHHHHHHHTTSSH--HHHHSCT--TSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-
T ss_pred HHccHhhhhH-----HHHHHHHHHHHHHhcccc--chhhccc--ccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 9999765421 122333333333221111 1112221 111 123455667788888999999988876432
Q ss_pred ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCC
Q 038171 268 KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKS 347 (509)
Q Consensus 268 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~ 347 (509)
. ..|+++.|+++..+.+ ..++++++..+++++++||+|||+++++|++++|++||++|+++++||+++++.+..
T Consensus 229 --~--~~d~l~~ll~~~~~~~--~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~ 302 (461)
T 3i3k_A 229 --K--IDDILQTLLDATYKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLP 302 (461)
T ss_dssp --C--CCSHHHHHHTCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCC
T ss_pred --c--cccHHHHHHHhhhccC--CCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCC
Confidence 1 1789999997653332 369999999999999999999999999999999999999999999999999987655
Q ss_pred CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCC
Q 038171 348 FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDR 427 (509)
Q Consensus 348 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~ 427 (509)
.++++++.++||++|||+||||++|+++. ++|.+.+|++++||.||||+.|+++.+++|+||++|+||++|||+||+++
T Consensus 303 ~~~~~~~~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~ 381 (461)
T 3i3k_A 303 PLTYDQLKDLNLLDRCIKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD 381 (461)
T ss_dssp CCCHHHHHTCHHHHHHHHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSC
T ss_pred CCCHHHHhcChHHHHHHHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCC
Confidence 67899999999999999999999999976 68999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEe
Q 038171 428 SVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAK 503 (509)
Q Consensus 428 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (509)
+... ..+..++|||+|+|.|||++||.+|++++++.||++|+++++++.. .+ . .....+..|++++.+.-.
T Consensus 382 ~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~--~-~~~~~~~~p~~~~~~~~~ 452 (461)
T 3i3k_A 382 NPAS-GEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYF-PT--V-NYTTMIHTPENPVIRYKR 452 (461)
T ss_dssp CHHH-HSSSSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCC-CC--B-CCSSSSCCBSSCEEEEEE
T ss_pred CCCC-CCCcceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCC-CC--c-ccceeecCCCCceEEeec
Confidence 5321 1356799999999999999999999999999999999999887642 11 2 234556778877766543
No 23
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=1.2e-69 Score=535.12 Aligned_cols=454 Identities=15% Similarity=0.242 Sum_probs=349.3
Q ss_pred hcccCCCCCCCCCCCC-CcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCC-ccccCC
Q 038171 24 HVTSSYASSLPPGPKG-LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHD-LQFSGR 101 (509)
Q Consensus 24 ~~~~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~-~~~~~~ 101 (509)
+..++...+.||||++ +|++||++.+ ..+++.++.+++++|||||++++|+.++++|+||+++++++.++. ..+..+
T Consensus 5 ~~~~~~~~~~PPgp~~~lPliG~~~~~-~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~ 83 (491)
T 3v8d_A 5 TSSRRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKF 83 (491)
T ss_dssp --CCCCCTTSCCEEEEEESSTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHH
T ss_pred hhhhccCCCCCCCCCCCcceeccHHHH-hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHH
Confidence 3345566789999998 6999999999 789999999999999999999999999999999999999997654 223322
Q ss_pred CchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhc---cCCccchHHHHH
Q 038171 102 PASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAA---ASKQVNLSEKTM 178 (509)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~vd~~~~~~ 178 (509)
+....... .|.+.++..+|+.|+++|+. +.+.|++..++.+.+.+.+++.++++.+..... .+..+++.+++.
T Consensus 84 ~~~~~~~~---~g~~~~~~~~g~~~~~~Rr~-~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~ 159 (491)
T 3v8d_A 84 HFALSAKA---FGHRSIDPMDGNTTENINDT-FIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCY 159 (491)
T ss_dssp HHHHHHHH---HTCCCCCGGGSSBCCCHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHH
T ss_pred HHHHHHHh---cCCcccccccchhHHHHHHH-HHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHH
Confidence 22111111 13344444579999999997 788999999999999999999998885532222 345789999999
Q ss_pred HhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038171 179 SLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELI 258 (509)
Q Consensus 179 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 258 (509)
.+++++++..+||.+....+ .....+.+.++.+.... ..+|.+.+.. .....++..++.+++.+++.+.+
T Consensus 160 ~~~~~~~~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~l~~~~-p~~~~~~~~~a~~~l~~~~~~~~ 229 (491)
T 3v8d_A 160 RVMFEAGYLTIFGRDLTRRD---TQKAHILNNLDNFKQFD------KVFPALVAGL-PIHMFRTAHNAREKLAESLRHEN 229 (491)
T ss_dssp HHHHHHHHHHHHCBCCSCGG---GHHHHHHHHHHHHHHHH------HHHHHHHTTC-CGGGCHHHHHHHHHHHHHTSHHH
T ss_pred HHHHHHHHHHHcCccccccc---hhhhhhHHHHHHHHHHH------HHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876422 12223333333332211 1222221110 01233455566666666666666
Q ss_pred HhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHH
Q 038171 259 DEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEI 338 (509)
Q Consensus 259 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei 338 (509)
+++++. . .|+++.++...++.+ .++++++..+++.+++||+|||+++++|++++|++||++|++|++||
T Consensus 230 ~~~~~~-------~-~d~l~~l~~~~~~~~---~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei 298 (491)
T 3v8d_A 230 LQKRES-------I-SELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEV 298 (491)
T ss_dssp HTTCBS-------C-CHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred Hhcccc-------c-cHHHHHHHHHhhccC---CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 554321 1 789999998876653 68999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCC---------CCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc----cCceeCCCCEEEeehhh
Q 038171 339 RSLVGGNK---------SFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII----DGYEIPAKTLVYVNAWA 405 (509)
Q Consensus 339 ~~~~~~~~---------~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~----~g~~ip~g~~v~~~~~~ 405 (509)
+++++..+ ..++++++.++|||+|||+|+||++|+ +. ++|.+.+|+++ +||.||+|+.|.++.++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~ 376 (491)
T 3v8d_A 299 KRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQL 376 (491)
T ss_dssp HHHHHHTTCCCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHH
T ss_pred HHHhhccccccccccccccCCHHHHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchh
Confidence 99986531 357889999999999999999999984 43 56999999999 99999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCcCCCCCCCCC--------CCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCC
Q 038171 406 IGRDPEAWENPEEFNPERFIDRSVDFK--------GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGM 477 (509)
Q Consensus 406 ~~~d~~~~~dp~~F~P~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~ 477 (509)
+|+||++|+||++|||+||++.+.... ..+..++|||+|+|.|+|++||.+|++++++.|+++|+|++.++.
T Consensus 377 ~~~d~~~~~~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~ 456 (491)
T 3v8d_A 377 MHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQ 456 (491)
T ss_dssp HHTCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---
T ss_pred hcCCcccCCCccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCC
Confidence 999999999999999999997653211 135678999999999999999999999999999999999987764
Q ss_pred C-CCcCCCCCCCCceeeeccceEEEEeec
Q 038171 478 K-KQDLDFDSLSGITVHKKNFLVLLAKYH 505 (509)
Q Consensus 478 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (509)
. ..+++.......+.+|+..+.|++|..
T Consensus 457 ~~~~~~~~~~~~~~~~~p~~~i~v~~~~~ 485 (491)
T 3v8d_A 457 AKCPPLDQSRAGLGILPPLNDIEFKYKFK 485 (491)
T ss_dssp CCCCCBCGGGTBEEECCBSSCCEEEEEEC
T ss_pred CCCCCCCcccCcCcccCCCCCeEEEEEec
Confidence 3 122223223344678889999998864
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=1.8e-69 Score=534.57 Aligned_cols=449 Identities=16% Similarity=0.282 Sum_probs=324.6
Q ss_pred cCCCCCCCCCCCC-CcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCC-ccccCCCch
Q 038171 27 SSYASSLPPGPKG-LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHD-LQFSGRPAS 104 (509)
Q Consensus 27 ~~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~-~~~~~~~~~ 104 (509)
++...+.||||++ +|++||++.+ ..+++.++.+|+++||+||++++|+.++++|+||+.++++++++. ..+......
T Consensus 8 ~~~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~ 86 (491)
T 3dax_A 8 RRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCTTCCCEEEEEESCTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHH
T ss_pred hccCCCCCCcCCCcccchhhHHHH-hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHH
Confidence 3445578899887 8999999998 567889999999999999999999999999999999999997654 222221111
Q ss_pred hhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHh---hccCCccchHHHHHHhH
Q 038171 105 VATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKS---AAASKQVNLSEKTMSLS 181 (509)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~vd~~~~~~~~~ 181 (509)
..... + |.+.+...+|+.|+++|+. +.+.|+...++.+.+.+.+.+..+++..... ...+..+++...+..++
T Consensus 87 -~~~~~-~-g~~~~~~~~g~~w~~~r~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i 162 (491)
T 3dax_A 87 -TSAKA-F-GHRSIDPMDGNTTENINDT-FIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp -HHHHH-H-TCCCCCGGGTSBCCCHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHH
T ss_pred -HHHHH-c-CCCcccccchhHHHHHHHH-HHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHH
Confidence 11111 1 3333324568899999998 5678888888888777777777766554322 12334688999999999
Q ss_pred HHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhh-hhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 038171 182 CNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGW-IDKLTGMMRRLENNVQESDRFYQELIDE 260 (509)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (509)
+++++.+.||.+.+..+. ....+......+.. +...+|++.+ ++. ...++..+..+.+.+.+ .++
T Consensus 163 ~~~~~~~~fG~~~~~~~~---~~~~~~~~~~~~~~------~~~~~p~l~~~lp~--~~~~~~~~~~~~~~~~~---~~~ 228 (491)
T 3dax_A 163 FEAGYLTIFGRDLTRRDT---QKAHILNNLDNFKQ------FDKVFPALVAGLPI--HMFRTAHNAREKLAESL---RHE 228 (491)
T ss_dssp HHHHHHHHHCBCSTTGGG---HHHHHHHHHHHHHH------HHHHHHHHHTTCCG--GGSHHHHHHHHHHHHHT---SHH
T ss_pred HHHhHHHHcCcccccccc---hhhhhhHHHHHHHH------HHHHhHHHHHhCCH--hhhhHHHHHHHHHHHHH---HHH
Confidence 999999999988764321 11111111111111 1122343221 110 11122233333332222 122
Q ss_pred hcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 261 HLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
+.++. .. ..|+++.+++...+.+ .++++++.++++.+++||+|||+++++|++++|++||++|++|++||++
T Consensus 229 ~~~~~---~~--~~d~l~~ll~~~~~~~---~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~ 300 (491)
T 3dax_A 229 NLQKR---ES--ISELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKR 300 (491)
T ss_dssp HHTTC---BS--CCHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred Hhhcc---cc--hhHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 22211 11 1799999987765432 5889999999999999999999999999999999999999999999999
Q ss_pred hhCCCCC---------CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc----cCceeCCCCEEEeehhhhc
Q 038171 341 LVGGNKS---------FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII----DGYEIPAKTLVYVNAWAIG 407 (509)
Q Consensus 341 ~~~~~~~---------~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~----~g~~ip~g~~v~~~~~~~~ 407 (509)
+++.+.. .++++++++||||+|||+||||++|+ +. ++|.+.+|+++ +||.|||||.|+++.+++|
T Consensus 301 v~~~~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~ 378 (491)
T 3dax_A 301 TLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMH 378 (491)
T ss_dssp HHHTTTCCCCSSSCCCCCCHHHHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHH
T ss_pred HhhccccccccCCCccccCHHHHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhc
Confidence 9875421 36899999999999999999999975 54 67999999988 7899999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCC--------CCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCC
Q 038171 408 RDPEAWENPEEFNPERFIDRSVDFK--------GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKK 479 (509)
Q Consensus 408 ~d~~~~~dp~~F~P~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~ 479 (509)
|||++|+||++||||||++++...+ ..+..++|||+|+|+|||++||++|+++++|.||++|+|++.++..
T Consensus 379 ~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~- 457 (491)
T 3dax_A 379 LDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA- 457 (491)
T ss_dssp TCTTTSSSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTC-
T ss_pred CCcccCCCHHHcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCC-
Confidence 9999999999999999996542211 1356799999999999999999999999999999999999876542
Q ss_pred CcCCCCC-CCCc-eeeeccceEEEEeec
Q 038171 480 QDLDFDS-LSGI-TVHKKNFLVLLAKYH 505 (509)
Q Consensus 480 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~ 505 (509)
.+.+++. ..+. +.+|+.++.++++-+
T Consensus 458 ~~~~~~~~~~~~~~~~p~~~~~~~~r~~ 485 (491)
T 3dax_A 458 KCPPLDQSRAGLGILPPLNDIEFKYKFK 485 (491)
T ss_dssp CCCCBCGGGTBEEECCBSSCCEEEEEEC
T ss_pred CCCCCCcccccccccCCCCCceEEEEec
Confidence 1222322 1343 568888888877654
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=7.5e-67 Score=516.31 Aligned_cols=451 Identities=13% Similarity=0.175 Sum_probs=319.5
Q ss_pred CCCCCCCCCCC-CcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171 29 YASSLPPGPKG-LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT 107 (509)
Q Consensus 29 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~ 107 (509)
...+.||||++ +|++||++.+ ..+++.++.+|+++|||||++++|+.++++|+||+++++++.++...+..++.....
T Consensus 15 ~~~~~PPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 15 RRPGEPPLDLGSIPWLGYALDF-GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred cCCCCCCCCCCCCcchhhHHHh-ccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 45578899988 8999999888 567889999999999999999999999999999999999998665322222221111
Q ss_pred hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHh-hccCCccchHHHHHHhHHHHHH
Q 038171 108 QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKS-AAASKQVNLSEKTMSLSCNTIC 186 (509)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~vd~~~~~~~~~~~vi~ 186 (509)
....+ |.+.+ ..+|+.|+ +. ..+.|+...++.+.+.+.+.+...++..... ...+..+++..++..+++++++
T Consensus 94 ~~~~~-g~~~~-~~~~~~~r---r~-~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~ 167 (498)
T 3b6h_A 94 MERIF-DVQLP-HYSPSDEK---AR-MKLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGY 167 (498)
T ss_dssp HHHTS-CCCCT-TCCHHHHH---HH-HHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHH
T ss_pred HHHHc-CCCcc-ccCHHHHH---HH-HHHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHH
Confidence 11111 33333 44577664 43 4457787778777766666666666654322 1233468899999999999999
Q ss_pred HHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhh-hHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 038171 187 RLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLT-GMMRRLENNVQESDRFYQELIDEHLDPK 265 (509)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (509)
.++||.+++..+. .........+..+...+. .+...+|++.+ ..+. ...++..++.+.+.+.+ ++++.++.
T Consensus 168 ~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 239 (498)
T 3b6h_A 168 LTLYGIEALPRTH--ESQAQDRVHSADVFHTFR--QLDRLLPKLAR-GSLSVGDKDHMCSVKSRLWKLL---SPARLARR 239 (498)
T ss_dssp HHHHCBSCSSCCH--HHHHHHHHHHHHHHHHHH--HHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHHHT---CHHHHTTC
T ss_pred HhhcCcccccccc--cchhhHHHhhHHHHHHHH--HHHhhHHHHHH-HhcCchhhHHHHHHHHHHHHHH---HHHHHhcc
Confidence 9999998754210 011112222222222211 11223443322 0111 11223333333332222 22222211
Q ss_pred ccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCC
Q 038171 266 RTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGN 345 (509)
Q Consensus 266 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~ 345 (509)
.. . .|+++.+++...+.+ .++++++. +++.+++||+|||+++++|++++|++||++|++|++||+++++.+
T Consensus 240 ---~~-~-~d~l~~ll~~~~~~~---~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~ 310 (498)
T 3b6h_A 240 ---AH-R-SKWLESYLLHLEEMG---VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQA 310 (498)
T ss_dssp ---BS-C-CHHHHHHHHHHHHTT---CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC-
T ss_pred ---cc-H-HHHHHHHHHHHHhCC---CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccc
Confidence 11 1 799999998766543 46777887 888899999999999999999999999999999999999999865
Q ss_pred CC------CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc-----cCceeCCCCEEEeehhh-hcCCCCCC
Q 038171 346 KS------FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII-----DGYEIPAKTLVYVNAWA-IGRDPEAW 413 (509)
Q Consensus 346 ~~------~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-----~g~~ip~g~~v~~~~~~-~~~d~~~~ 413 (509)
.. .++++++.+||||+|||+||||++|+ +. ++|.+.+|+++ +||.|||||.|+++.++ +||||++|
T Consensus 311 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~ 388 (498)
T 3b6h_A 311 EQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY 388 (498)
T ss_dssp ---------CCTHHHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS
T ss_pred CCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc
Confidence 22 26899999999999999999999985 54 67999999887 68999999999999999 99999999
Q ss_pred CCCCCCCCCcCCCCCCCCC--------CCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCC
Q 038171 414 ENPEEFNPERFIDRSVDFK--------GKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFD 485 (509)
Q Consensus 414 ~dp~~F~P~R~l~~~~~~~--------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~ 485 (509)
+||++||||||++.+...+ ..+..++|||+|+|.|||++||++|++++++.||++|+|++.++... ..+.+
T Consensus 389 ~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~ 467 (498)
T 3b6h_A 389 TDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVE-IPEFD 467 (498)
T ss_dssp SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCC-CCCBC
T ss_pred CChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCC-CCCCC
Confidence 9999999999997543211 12567999999999999999999999999999999999998765321 11222
Q ss_pred C--CCCceeeeccceEEEEeecc
Q 038171 486 S--LSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 486 ~--~~~~~~~~~~~~~~~~~~~~ 506 (509)
. ....+..|+.++.++++.|-
T Consensus 468 ~~~~~~~~~~p~~~~~~~~~~~~ 490 (498)
T 3b6h_A 468 LSRYGFGLMQPEHDVPVRYRIRP 490 (498)
T ss_dssp GGGTBSSBCCBSSCCEEEEEECC
T ss_pred ccccccccCCCCCCccEEEEecc
Confidence 1 22334677788888888774
No 26
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=9.5e-67 Score=503.45 Aligned_cols=402 Identities=20% Similarity=0.268 Sum_probs=310.4
Q ss_pred CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCchhhh
Q 038171 29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT 107 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~ 107 (509)
..++.||||+++|++|++...+..+++..+.++ ++||||+++++ ++.++++|+||+.+++++.++ .|..++.....
T Consensus 23 ~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~ 99 (436)
T 2cd8_A 23 RTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTT 99 (436)
T ss_dssp -----------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSS
T ss_pred hhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccc
Confidence 345778999999999998632267889999999 89999999997 778899999999999999876 45555431111
Q ss_pred hcc---ccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHH
Q 038171 108 QRL---TYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCN 183 (509)
Q Consensus 108 ~~~---~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~ 183 (509)
... ...+ ..++..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.+ ..++++|+..++ ..++++
T Consensus 100 ~~~~~~~~~~-~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~~~~~ 175 (436)
T 2cd8_A 100 PLTEAEAALN-HNMLESDPPRHTRLRKL-VAREFTMRRVELLRPRVQEIVDGLVDAMLA--APDGRADLMESLAWPLPIT 175 (436)
T ss_dssp CCCTTGGGTC-CSGGGCCTTHHHHHHHH-HGGGSSHHHHHTTHHHHHHHHHHHHHHHHT--CTTSCEEHHHHTTTHHHHH
T ss_pred cccccccccc-ccccccCchHHHHHHHH-hHHhhCHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCcchHHHHHHHHHHH
Confidence 100 1112 33556689999999998 789999999999999999999999999974 235689999977 579999
Q ss_pred HHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 038171 184 TICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLD 263 (509)
Q Consensus 184 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 263 (509)
+|+. +||.+.+ ..+.+......+.. .. .| ++..++.+.+.+++.+.++++++
T Consensus 176 vi~~-~~G~~~~-------~~~~~~~~~~~~~~------~~--~~------------~~~~~~~~~~~~~~~~~i~~r~~ 227 (436)
T 2cd8_A 176 VISE-LLGVPEP-------DRAAFRVWTDAFVF------PD--DP------------AQAQTAMAEMSGYLSRLIDSKRG 227 (436)
T ss_dssp HHHH-HHTCCGG-------GHHHHHHHHHHHHS------CS--ST------------THHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHH-HhCCCHH-------HHHHHHHHHHHHhc------cC--CH------------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998 6998653 22334433332221 00 01 23455667788889999988776
Q ss_pred ccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhC
Q 038171 264 PKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVG 343 (509)
Q Consensus 264 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~ 343 (509)
+. ..|+++.|+++..+.+ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 228 ~~-------~~d~l~~ll~~~~~~~--~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~----- 293 (436)
T 2cd8_A 228 QD-------GEDLLSALVRTSDEDG--SRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM----- 293 (436)
T ss_dssp SC-------CCSHHHHHHHHHHHCT--TTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----
T ss_pred CC-------CCCHHHHHHHhhhccC--CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh-----
Confidence 42 1789999998876522 369999999999999999999999999999999999999999999974
Q ss_pred CCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCc
Q 038171 344 GNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPER 423 (509)
Q Consensus 344 ~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R 423 (509)
.|++|||+|+||++|++|..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||||
T Consensus 294 --------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR 359 (436)
T 2cd8_A 294 --------------TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRR 359 (436)
T ss_dssp --------------GGHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTS
T ss_pred --------------hhHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCC
Confidence 379999999999999999668899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEE
Q 038171 424 FIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLA 502 (509)
Q Consensus 424 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (509)
|- ..++|||+|+|.|+|++||++|++++++.|+++| ++++..+. .++. ...+.+..+...+.|++
T Consensus 360 ~~----------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~--~~~~~~~~~~~~l~v~~ 425 (436)
T 2cd8_A 360 DT----------AGHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSP--GELV--WYPNPMIRGLKALPIRW 425 (436)
T ss_dssp CC----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCG--GGCC--BCCCTTBCCBSCCEEC-
T ss_pred CC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCC--ccce--eccCcccCCcceeEEEE
Confidence 61 3589999999999999999999999999999999 69886432 2222 23344556777899999
Q ss_pred eeccc
Q 038171 503 KYHEY 507 (509)
Q Consensus 503 ~~~~~ 507 (509)
++|.-
T Consensus 426 ~~r~~ 430 (436)
T 2cd8_A 426 RRGRE 430 (436)
T ss_dssp -----
T ss_pred ecCcc
Confidence 99864
No 27
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=8.3e-67 Score=513.31 Aligned_cols=435 Identities=17% Similarity=0.262 Sum_probs=308.2
Q ss_pred CCCCCCCCCCC-CcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh-h
Q 038171 29 YASSLPPGPKG-LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV-A 106 (509)
Q Consensus 29 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~-~ 106 (509)
...+.||||++ +|++||++.+ ..+++.++.+|+++|||||++++|+.++++|+||+.+++++.++.. +..++... .
T Consensus 15 ~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~ 92 (475)
T 3b98_A 15 RRRNEPPLDKGMIPWLGHALEF-GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVL 92 (475)
T ss_dssp CCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHH
T ss_pred cCCCCCCCCCCCcchHHhHHHH-hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHH
Confidence 34678999988 9999999988 6788999999999999999999999999999999999999986542 22221111 1
Q ss_pred hhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhh--ccCCccchHHHHHHhHHHH
Q 038171 107 TQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSA--AASKQVNLSEKTMSLSCNT 184 (509)
Q Consensus 107 ~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~vd~~~~~~~~~~~v 184 (509)
.... + |.+.+ ..+++.| |+. ..+.|+...++.+.+.+.+++..+++.+.... ..+..+++...+..+++++
T Consensus 93 ~~~~-~-g~~~~-~~~~~~~---R~~-~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (475)
T 3b98_A 93 MKRI-F-NMILP-SHNPESE---KKR-AEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165 (475)
T ss_dssp HHHT-T-CCCCT-TCCHHHH---HHH-HHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHH
T ss_pred HHHH-h-CCCCC-CCChHHH---HHH-HHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHH
Confidence 1111 1 33333 4456655 455 56789999999998888888888887764321 1223578889999999999
Q ss_pred HHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhh-hHHHHHHHHHHHHHHHHHHHH-Hhhc
Q 038171 185 ICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLT-GMMRRLENNVQESDRFYQELI-DEHL 262 (509)
Q Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~i-~~~~ 262 (509)
++...||.+... ...+......+... ...+|++.+ ..+. ...+...+..+ .+.+.+ +++.
T Consensus 166 ~~~~~~g~~~~~-------~~~~~~~~~~~~~~------~~~~p~l~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 227 (475)
T 3b98_A 166 GYLTVFGAENNN-------SAALTQIYEEFRRF------DKLLPKLAR-TTVNKEEKQIASAARE----KLWKWLTPSGL 227 (475)
T ss_dssp HHHHHHCCTTSC-------HHHHHHHHHHHHHH------HHHHHHHHT-TCCCHHHHHHHHHHHH----HHHHHHSCTTS
T ss_pred hhhheeCCcccc-------chhcHHHHHHHHHH------HhhhHHHHH-HhcChhhhHHHHHHHH----HHHHHHHHHHh
Confidence 999889954221 12222222222211 112333221 0011 11122222222 222222 2222
Q ss_pred CccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171 263 DPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV 342 (509)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~ 342 (509)
++ . . ...|+++.|++...+.+ .++++++. +++.+++||+|||+++++|++++|++||++|++|++|++.
T Consensus 228 ~~---~-~-~~~d~l~~ll~~~~~~~---~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~-- 296 (475)
T 3b98_A 228 DR---K-P-REQSWLGSYVKQLQDEG---IDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG-- 296 (475)
T ss_dssp CC---C-C-CTTSHHHHHHHHHHHTT---CCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC---
T ss_pred hc---c-c-cccHHHHHHHHHHHHcC---CCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--
Confidence 11 1 1 12799999998765543 57888888 9999999999999999999999999999999999999982
Q ss_pred CCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc-----cCceeCCCCEEEeehhh-hcCCCCCCCCC
Q 038171 343 GGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII-----DGYEIPAKTLVYVNAWA-IGRDPEAWENP 416 (509)
Q Consensus 343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~-----~g~~ip~g~~v~~~~~~-~~~d~~~~~dp 416 (509)
+. ..++++++.+||||+|||+|+||++|+ +. ++|.+.+|+++ +||.||||+.|+++.++ +||||++|+||
T Consensus 297 ~~--~~~~~~~~~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP 372 (475)
T 3b98_A 297 GK--HLRLEERQKNTPVFDSVLWETLRLTAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQP 372 (475)
T ss_dssp -------------CCHHHHHHHHHHHHHHEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSST
T ss_pred CC--CCCCHHHHhcCHHHHHHHHHHHhcCCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCc
Confidence 22 346899999999999999999999986 65 68999999988 88999999999999999 99999999999
Q ss_pred CCCCCCcCCCCCCCC--------CCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCC-C
Q 038171 417 EEFNPERFIDRSVDF--------KGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDS-L 487 (509)
Q Consensus 417 ~~F~P~R~l~~~~~~--------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~-~ 487 (509)
++|||+||++.+... ...+..++|||+|+|.|+|++||.+|++++++.||++|++++.++... ..+... .
T Consensus 373 ~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~ 451 (475)
T 3b98_A 373 EMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNAT-VPLVDPSR 451 (475)
T ss_dssp TSCCTTTTBCTTSCBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCC-CCCBCGGG
T ss_pred ccCCcchhcCCCCCccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCC-CCCCCccc
Confidence 999999999654221 113467999999999999999999999999999999999998765321 111221 1
Q ss_pred CC-ceeeeccceEEEEeecc
Q 038171 488 SG-ITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 488 ~~-~~~~~~~~~~~~~~~~~ 506 (509)
.+ .+.+|+.++++++++|.
T Consensus 452 ~~~~~~~p~~~~~~~~~~R~ 471 (475)
T 3b98_A 452 YGFGILQPAGDLEIRYRIRF 471 (475)
T ss_dssp TBEEECCBSSCCEEEEEEC-
T ss_pred ccccccCCCCCceEEEEecc
Confidence 23 46678889999999985
No 28
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=4.1e-65 Score=491.19 Aligned_cols=404 Identities=17% Similarity=0.249 Sum_probs=317.6
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceE
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLI 118 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (509)
.|++||+..+ ..+++.++.+++++|| |||+++++|.++++|+||+.++.++. . ..|...+...........|.+.+
T Consensus 8 ~P~lG~~~~~-~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l 84 (417)
T 1izo_A 8 DKSLDNSLTL-LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAI 84 (417)
T ss_dssp CCCTTHHHHH-HHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCG
T ss_pred CCccchHHHH-hhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhccccce
Confidence 4899999988 6788999999999998 89999998899999999999986554 2 23433222111000011233445
Q ss_pred ecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCc
Q 038171 119 FSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNE 198 (509)
Q Consensus 119 ~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~ 198 (509)
+..+|+.|+++|+. +.+.|++..++.+.+.+++.++++++.|.. ++++|+.+++..+++++++.+ ||.+.+..
T Consensus 85 ~~~dg~~h~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~- 157 (417)
T 1izo_A 85 QGMDGSAHIHRKML-FLSLMTPPHQKRLAELMTEEWKAAVTRWEK----ADEVVLFEEAKEILCRVACYW-AGVPLKET- 157 (417)
T ss_dssp GGCCHHHHHHHHHH-HHHTSSHHHHHHHHHHHHHHHHHHHHHHTT----SSEEEHHHHHHHHHHHHHHHH-HTCCCCTT-
T ss_pred eecCChHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHhc----CCCeeHHHHHHHHHHHHHHHH-cCCCCCch-
Confidence 67789999999998 789999999999999999999999998853 568999999999999999998 69887642
Q ss_pred cchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHH
Q 038171 199 EAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVD 278 (509)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~ 278 (509)
....+.+.+..+.. .+. ...| ...+..++.+.+.+++.+++++++++.... ..+|+++
T Consensus 158 ----~~~~~~~~~~~~~~---~~~--~~~~----------~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---~~~d~l~ 215 (417)
T 1izo_A 158 ----EVKERADDFIDMVD---AFG--AVGP----------RHWKGRRARPRAEEWIEVMIEDARAGLLKT---TSGTALH 215 (417)
T ss_dssp ----THHHHHHHHHHHHH---HTT--CCSH----------HHHHHHHHHHHHHHHHHHHHHHHHTTSSCC---CTTSHHH
T ss_pred ----HHHHHHHHHHHHHh---hcc--cCCc----------cchhHHHHHHHHHHHHHHHHHHHHhhccCC---CcCCHHH
Confidence 11222222222221 110 0111 122345667788899999999887653221 1278999
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccch
Q 038171 279 VLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELH 358 (509)
Q Consensus 279 ~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp 358 (509)
.|+++.++. +..++++++..++..+ +||++||+++++|++++|++||++|++|++| ++|
T Consensus 216 ~ll~~~~~~--g~~l~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E------------------~~~ 274 (417)
T 1izo_A 216 EMAFHTQED--GSQLDSRMAAIELINV-LRPIVAISYFLVFSALALHEHPKYKEWLRSG------------------NSR 274 (417)
T ss_dssp HHHHCBCTT--SCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC------------------CHH
T ss_pred HHHHhcccc--CCCCCHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc------------------CCH
Confidence 998764322 2358888887777665 5999999999999999999999999999986 379
Q ss_pred hHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCcee
Q 038171 359 YLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEF 438 (509)
Q Consensus 359 ~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~ 438 (509)
|++|||+|+||++|+++. ++|.+.+|++++|+.||+|+.|+++.+++||||++|+||++|||+||++.+. .+..+
T Consensus 275 ~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~----~~~~~ 349 (417)
T 1izo_A 275 EREMFVQEVRRYYPFGPF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREE----NLFDM 349 (417)
T ss_dssp HHHHHHHHHHHHSCCCCE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCC----CSSSC
T ss_pred HHHHHHHHHhhcCCcccc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCC----CCcce
Confidence 999999999999999997 6799999999999999999999999999999999999999999999997542 45679
Q ss_pred ecccCC----CCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 439 IPFGAG----RRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 439 ~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
+|||+| +|.|+|++||.+|++++++.|+++|++++.++. .... ...++..|++++.+++++|+
T Consensus 350 ~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~r~ 416 (417)
T 1izo_A 350 IPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQS----LHYS-LARMPSLPESGFVMSGIRRK 416 (417)
T ss_dssp CTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCC----CCCC-SSSSSCCCTTCCEEEEEEEC
T ss_pred eCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCC----cCcc-cccCCCCCCCCceEeeeeCC
Confidence 999999 599999999999999999999999999986642 1121 23567889999999999986
No 29
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=4.6e-66 Score=492.48 Aligned_cols=386 Identities=20% Similarity=0.308 Sum_probs=306.9
Q ss_pred CCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCC-chhhhhccccCC
Q 038171 36 GPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRP-ASVATQRLTYNG 114 (509)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~ 114 (509)
+++..|++||++.+ ..+++.++.+|+++||||++ ++|+.++++|+||+.+++++.++ .|.+++ ......... |
T Consensus 3 ~~~~~p~iGnl~~~-~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g 76 (389)
T 1n97_A 3 RLSLREAWPYLKDL-QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--G 76 (389)
T ss_dssp ECCHHHHHHHHHHH-HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--C
T ss_pred ccccccccccHHHH-hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--C
Confidence 45678999999888 56788999999999999999 99999999999999999999876 566665 221111111 3
Q ss_pred cceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCC
Q 038171 115 LDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRS 194 (509)
Q Consensus 115 ~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 194 (509)
.+ +++.+|+.|+++||. +.+.|++..++.+.+.++++++++++.+. ++++|+.+++..+++++++.++||.+.
T Consensus 77 ~~-l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~dl~~~~~~~~~~vi~~~~fG~~~ 149 (389)
T 1n97_A 77 RG-LLTDWGESWKEARKA-LKDPFLPKNVRGYREAMEEEARAFFGEWR-----GEERDLDHEMLALSLRLLGRALFGKPL 149 (389)
T ss_dssp SS-TTTCCHHHHHHHHHH-HCGGGSHHHHHTTHHHHHHHHHHHHHTCC-----SCCEEHHHHHHHHHHHHHHHHHHSSCC
T ss_pred Cc-cccCCcHHHHHHHHH-hCcccCHHHHHHHHHHHHHHHHHHHHHcc-----CCcCcHHHHHHHHHHHHHHHHHcCCcc
Confidence 33 445579999999998 78999999999999999999999998875 568999999999999999999999987
Q ss_pred CCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcc
Q 038171 195 DGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQE 274 (509)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 274 (509)
+ + ++.+.+..+...... . ..+++.+++ ....++..++.+.+.+++.+.++++
T Consensus 150 ~--~-------~~~~~~~~~~~~~~~-~---~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~i~~r------------- 201 (389)
T 1n97_A 150 S--P-------SLAEHALKALDRIMA-Q---TRSPLALLD--LAAEARFRKDRGALYREAEALIVHP------------- 201 (389)
T ss_dssp C--H-------HHHHHHHHHHHHHHH-H---HHCGGGGGC--HHHHHHHHHHHHHHHHHHGGGTTST-------------
T ss_pred h--H-------HHHHHHHHHHHHHHH-H---HhhHHHhcC--CchhHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 5 1 334444433332211 0 011112221 1122334444455555544444332
Q ss_pred hHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhh
Q 038171 275 DLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV 354 (509)
Q Consensus 275 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~ 354 (509)
|+ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.
T Consensus 202 -----ll---------~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------ 255 (389)
T 1n97_A 202 -----PL---------SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------ 255 (389)
T ss_dssp -----TG---------GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------
T ss_pred -----hc---------ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------
Confidence 12 1588999999999999999999999999999999999999999999998864
Q ss_pred ccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 038171 355 QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434 (509)
Q Consensus 355 ~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~ 434 (509)
|||+|+||++|++|. .+|.+.+|++++||.||||+.|.++.+++||| +|+||++||||||+++. ...
T Consensus 256 -------a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~---~~~ 322 (389)
T 1n97_A 256 -------AAFQEALRLYPPAWI-LTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER---GTP 322 (389)
T ss_dssp -------HHHHHHHHHSCSSCC-EEEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC---CCC
T ss_pred -------HHHHHHHhcCCCccc-cceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCC---CCC
Confidence 999999999999998 48999999999999999999999999999999 99999999999999652 124
Q ss_pred CceeecccCCCCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecccC
Q 038171 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEYV 508 (509)
Q Consensus 435 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (509)
+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++.. . ..+++..|++++.+++++|+++
T Consensus 323 ~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~----~~~~~~~p~~~~~v~~~~~~~~ 389 (389)
T 1n97_A 323 SGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---V----LAQVTLRPEGGLPARPREEVRA 389 (389)
T ss_dssp BTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC---E----EESSSEEETTCCEECCBC----
T ss_pred CCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc---c----cceEEeeeCCCceEEEeecccC
Confidence 56799999999999999999999999999999999999876532 1 4577888999999999999864
No 30
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=5.4e-64 Score=481.35 Aligned_cols=375 Identities=18% Similarity=0.235 Sum_probs=299.1
Q ss_pred CCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-CccEEEecCHHHHHHHHHhCC-ccccCCCchhhhhc-
Q 038171 33 LPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-FVPTLIVSSAKMAKETLKAHD-LQFSGRPASVATQR- 109 (509)
Q Consensus 33 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~vvv~dp~~~~~i~~~~~-~~~~~~~~~~~~~~- 109 (509)
.||||+++|++|++.. +++..+.+|+ +||||+++.++ |.+.++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~ 76 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSAS 76 (404)
T ss_dssp ----CCBSSCCCSSTT----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHH
T ss_pred CCCCCCCCCCCCCcCC----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccccc
Confidence 4899999999999754 7889999996 69999999874 567778999999999998763 22333332211110
Q ss_pred --cccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHH
Q 038171 110 --LTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICR 187 (509)
Q Consensus 110 --~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~ 187 (509)
....+...++..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.+...+++++|+...+...+.++++.
T Consensus 77 ~~~~~~~~~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~ 155 (404)
T 1jfb_A 77 GKQAAKAKPTFVDMDPPEHMHQRSM-VEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIY 155 (404)
T ss_dssp HHHHTTSCCCGGGCCTTHHHHHHTT-TGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHH
T ss_pred ccchhcccCcccccCchhHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHH
Confidence 01112234556689999999998 799999999999999999999999999987544457899999999999999999
Q ss_pred HHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 038171 188 LAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRT 267 (509)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (509)
.+||.+.+. .++...... .+.. .. ...++..++.+.+.+++.+.+++++++.
T Consensus 156 ~~~G~~~~~--------~~~~~~~~~---~~~~-----~~----------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-- 207 (404)
T 1jfb_A 156 TLLGVPFND--------LEYLTQQNA---IRTN-----GS----------STAREASAANQELLDYLAILVEQRLVEP-- 207 (404)
T ss_dssp HHHTCCGGG--------HHHHHHHHH---HHHC-----TT----------SCHHHHHHHHHHHHHHHHHHHHHHHHSC--
T ss_pred HHcCCCHHH--------HHHHHHHHH---HHhc-----cC----------cchHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 999986531 122211111 1100 00 1123445566778888888888876532
Q ss_pred ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCC
Q 038171 268 KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKS 347 (509)
Q Consensus 268 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~ 347 (509)
.+|+++.|+++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|+++
T Consensus 208 -----~~d~l~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~---------- 269 (404)
T 1jfb_A 208 -----KDDIISKLCTEQVKP---GNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN---------- 269 (404)
T ss_dssp -----CSSHHHHHHHHTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC----------
T ss_pred -----CCcHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC----------
Confidence 179999999764332 36899999999999999999999999999999999999999999982
Q ss_pred CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCC
Q 038171 348 FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDR 427 (509)
Q Consensus 348 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~ 427 (509)
.+|++|||+|+||++|++|..++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||++.
T Consensus 270 ---------~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~ 340 (404)
T 1jfb_A 270 ---------PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP 340 (404)
T ss_dssp ---------GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS
T ss_pred ---------hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC
Confidence 37999999999999999996688999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCC
Q 038171 428 SVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPG 476 (509)
Q Consensus 428 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~ 476 (509)
. .++|||+|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus 341 ~--------~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 341 Q--------DPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp S--------CCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred C--------CCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCC
Confidence 2 389999999999999999999999999999999 7987643
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=4.7e-64 Score=480.76 Aligned_cols=385 Identities=16% Similarity=0.251 Sum_probs=306.9
Q ss_pred CCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEe----e-cC-ccEEEecCHHHHHHHH-HhCCccccCCC
Q 038171 30 ASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLR----I-GF-VPTLIVSSAKMAKETL-KAHDLQFSGRP 102 (509)
Q Consensus 30 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~----~-~~-~~~vvv~dp~~~~~i~-~~~~~~~~~~~ 102 (509)
..+.||||+++|+. + ..+++..+.+| ++||||++++ + ++ .++++|+||+.+++++ .++. |..++
T Consensus 8 ~~~lppgp~~~p~~-----~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~ 78 (406)
T 1ued_A 8 VAPLLREPANFQLR-----T-NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRP 78 (406)
T ss_dssp CCCEEECCTTTTCE-----E-TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCC
T ss_pred CCCCcccCcccCCC-----C-CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--ccccc
Confidence 46688999999986 3 56789999999 9999999999 6 78 8999999999999999 5432 34333
Q ss_pred chhhhh-ccc---cCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH
Q 038171 103 ASVATQ-RLT---YNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM 178 (509)
Q Consensus 103 ~~~~~~-~~~---~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~ 178 (509)
...... ... ..+ +.++..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.. .++++|+.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~-~~l~~~~g~~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~ 153 (406)
T 1ued_A 79 QFTQSKSGAHVEAQFV-GQISTYDPPEHTRLRKM-LTPEFTVRRIRRMEPAIQSLIDDRLDLLEA---EGPSADLQGLFA 153 (406)
T ss_dssp CC---------CGGGT-TCGGGCCTTHHHHHHHH-HGGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCTTEEHHHHTH
T ss_pred cccccccccccccccc-cccccCCCHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHH
Confidence 211000 010 012 23455689999999998 789999999999999999999999999974 366899999887
Q ss_pred H-hHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038171 179 S-LSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQEL 257 (509)
Q Consensus 179 ~-~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (509)
. +++++++ .+||.+.+ ..+.+.+....+.. . .. ..++..++.+.+.+++.+.
T Consensus 154 ~~~~~~vi~-~~~G~~~~-------~~~~~~~~~~~~~~----~----~~-----------~~~~~~~~~~~~~~~~~~~ 206 (406)
T 1ued_A 154 DPVGAHALC-ELLGIPRD-------DQREFVRRIRRNAD----L----SR-----------GLKARAADSAAFNRYLDNL 206 (406)
T ss_dssp HHHHHHHHH-HHHTCCHH-------HHHHHHHHHHHCC-----------C-----------CHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHH-HHcCCCHH-------HHHHHHHHHHHHHh----c----cC-----------CHHHHHHHHHHHHHHHHHH
Confidence 5 9999999 47997532 22233332222111 0 00 1134556677788888888
Q ss_pred HHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHH
Q 038171 258 IDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEE 337 (509)
Q Consensus 258 i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~E 337 (509)
+++++++. ..|+++.|+++. + ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|
T Consensus 207 i~~r~~~~-------~~d~l~~ll~~~-~----~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e 274 (406)
T 1ued_A 207 LARQRADP-------DDGLLGMIVRDH-G----DNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFES 274 (406)
T ss_dssp HHHHHHSC-------CSSHHHHHHHHH-G----GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHC
T ss_pred HHHHHhCC-------CCCHHHHHHHhc-C----CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhC
Confidence 88876532 178999999875 2 36899999999999999999999999999999999999999999997
Q ss_pred HHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCC
Q 038171 338 IRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPE 417 (509)
Q Consensus 338 i~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~ 417 (509)
+. |++|||+|+||++|++|..++|.+.+|++++||.||||+.|+++.+++||||++|+||+
T Consensus 275 ~~-------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~ 335 (406)
T 1ued_A 275 PE-------------------KAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD 335 (406)
T ss_dssp HH-------------------HHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTT
T ss_pred HH-------------------HHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChh
Confidence 53 69999999999999999767899999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeecc
Q 038171 418 EFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKN 496 (509)
Q Consensus 418 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (509)
+|||||| ...++|||+|+|.|+|++||++|++++++.|+++| ++++..+. ++ +....+.+.++ .
T Consensus 336 ~F~PeR~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~-~ 400 (406)
T 1ued_A 336 VLDANRA----------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPI--EE--VKYRSAFVDCP-D 400 (406)
T ss_dssp SCCTTSC----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCBCCSSSCCB-S
T ss_pred hcCCCCC----------CCCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCc--cc--ccccccccccC-C
Confidence 9999998 13589999999999999999999999999999999 79986432 22 23344556667 7
Q ss_pred ceEEE
Q 038171 497 FLVLL 501 (509)
Q Consensus 497 ~~~~~ 501 (509)
.+.|+
T Consensus 401 ~lpv~ 405 (406)
T 1ued_A 401 QVPVT 405 (406)
T ss_dssp CCEEE
T ss_pred eeeee
Confidence 77775
No 32
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=7.4e-64 Score=482.14 Aligned_cols=405 Identities=17% Similarity=0.210 Sum_probs=314.6
Q ss_pred CCCCCCCcccccccCCCCCCCchhHHHHHhhh-CCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhcccc
Q 038171 34 PPGPKGLPFIGNLHQFDSSKPHVSFWELSKKY-GPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTY 112 (509)
Q Consensus 34 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky-G~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 112 (509)
|||| |++||++.+ ..+++.++.+++++| |||+++.+++.++++|++|+.++ ++.+. ..|...+..........
T Consensus 4 pPg~---P~iG~~~~~-~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~ 77 (415)
T 3awm_A 4 TPHT---KGPDETLSL-LADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL 77 (415)
T ss_dssp --------CCCCHHHH-HHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT
T ss_pred CCCC---CccchHHHH-HhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc
Confidence 5666 899999988 578999999999999 79999999888999999999987 66544 33443322111000011
Q ss_pred CCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcC
Q 038171 113 NGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGK 192 (509)
Q Consensus 113 ~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 192 (509)
.|.+.++..+|+.|+++|+. +.+.|+++.++.+.+.+.+.++++++.|.. ++++|+.+++..+++++++.+ ||.
T Consensus 78 ~g~~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~----~~~vdl~~~~~~~~~~vi~~~-~G~ 151 (415)
T 3awm_A 78 LGQGGVQGLDGETHRHRKQM-FMGLMTPERVRALAQLFEAEWRRAVPGWTR----KGEIVFYDELHEPLTRAVCAW-AGV 151 (415)
T ss_dssp SCSSSGGGCCHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHHHHHHHH----HSEEEHHHHHHHHHHHHHHHH-HTC
T ss_pred cCCcceeecCcHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHhhcc----CCcEeHHHHHHHHHHHHHHHH-cCC
Confidence 13344566789999999998 799999999999999999999999999964 458999999999999999999 898
Q ss_pred CCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccC
Q 038171 193 RSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQ 272 (509)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 272 (509)
+.+.. ++.+....+...+..+. ... +...+..++.+.+.+++.+++++++++.... .
T Consensus 152 ~~~~~--------~~~~~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---~ 208 (415)
T 3awm_A 152 PLPDD--------EAGNRAGELRALFDAAG--SAS----------PRHLWSRLARRRVDAWAKRIIEGIRAGSIGS---G 208 (415)
T ss_dssp CCCGG--------GHHHHHHHHHHHHHSTT--CSS----------HHHHHHHHHHHHHHHHHHHHHHHHHHTSSCC---C
T ss_pred CCCcc--------hHHHHHHHHHHHHHHhc--ccC----------chHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---C
Confidence 76531 12222222222221111 001 1223455677788889999998876543211 1
Q ss_pred cchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChh
Q 038171 273 QEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDED 352 (509)
Q Consensus 273 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~ 352 (509)
.+|+++.|+++.++. +..++++++..++..+ +||++||+++++|++++|++||++|++|++|
T Consensus 209 ~~d~l~~ll~~~~~~--g~~~~~~~~~~~~~~~-~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e--------------- 270 (415)
T 3awm_A 209 SGTAAYAIAWHRDRH--DDLLSPHVAAVELVNV-LRPTVAIAVYITFVAHALQTCSGIRAALVQQ--------------- 270 (415)
T ss_dssp TTSHHHHHHHCBCTT--SCBCCHHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC---------------
T ss_pred CCCHHHHHHhhhhcc--CCCCCHHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHhChHHHHHHHHH---------------
Confidence 268999998764322 2358888888877765 4999999999999999999999999999986
Q ss_pred hhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCC
Q 038171 353 DVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFK 432 (509)
Q Consensus 353 ~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~ 432 (509)
+||++|||+|+||++|+++. ++|.+.+|++++|+.||+|+.|+++.+++||||++|+||++|||+||++.+.
T Consensus 271 ----~~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~--- 342 (415)
T 3awm_A 271 ----PDYAELFVQEVRRFYPFFPA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE--- 342 (415)
T ss_dssp ----TTHHHHHHHHHHHHSCCSCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCC---
T ss_pred ----HHHHHHHHHHHhhcCCCccc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCC---
Confidence 58999999999999999997 6799999999999999999999999999999999999999999999997542
Q ss_pred CCCceeecccCC----CCCCCChhHHHHHHHHHHHHhHhcceeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171 433 GKNFEFIPFGAG----RRICPGMHLGIATVDLALANLLYKFDWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH 505 (509)
Q Consensus 433 ~~~~~~~~Fg~G----~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (509)
....++|||+| +|.|+|++||.+|++++++.|+++|+++++++. +.. ....++..|++++.+++++.
T Consensus 343 -~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~----~~~-~~~~~~~~p~~~~~~~~~~~ 413 (415)
T 3awm_A 343 -DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQD----LSI-DFARLPALPKSGFVMRNVHI 413 (415)
T ss_dssp -CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCC----CCB-CTTSSSCCBTTCCEEEEEES
T ss_pred -CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCC----CCc-CcCCCccccCCCceEEEEeC
Confidence 34679999999 599999999999999999999999999986542 111 12457788999999999864
No 33
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=7.5e-63 Score=471.97 Aligned_cols=379 Identities=16% Similarity=0.211 Sum_probs=304.5
Q ss_pred CCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCc--h-hhhhcccc-CCcceEecCCchh
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPA--S-VATQRLTY-NGLDLIFSPYGEY 125 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~--~-~~~~~~~~-~~~~~~~~~~g~~ 125 (509)
..+++..+.+| ++||||+++++ |+.+.++|+||+.+++++.++ .|..++. . ........ .+...++..+|+.
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 94 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE 94 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCchh
Confidence 56889999999 89999999997 889999999999999999864 3555431 1 11100111 0123355668999
Q ss_pred HHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhh
Q 038171 126 WREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGR 204 (509)
Q Consensus 126 w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (509)
|+++||. +.+.|++..++.+.+.++++++++++.+.+ .++++|+...+ ..+++++++. +||.+.+ ..
T Consensus 95 h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-------~~ 162 (403)
T 3aba_A 95 HTSDRKL-LAKEFTVRRMQALRPNIQRIVDEHLDAIEA---RGGPVDLVKTFANAVPSMVISD-LFGVPVE-------RR 162 (403)
T ss_dssp HHHHHHH-HHHHSCHHHHHTTHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG-------GH
T ss_pred HHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHH-------HH
Confidence 9999998 788999999999999999999999999975 35689998766 4799999998 6998653 12
Q ss_pred hHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHH
Q 038171 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIR 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (509)
+.+......+. .. . .| + ++..++.+.+.+++.+.+++++++. .+|+++.|+++.
T Consensus 163 ~~~~~~~~~~~---~~---~--~~---------p--~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~ 216 (403)
T 3aba_A 163 AEFQDIAEAMM---RV---D--QD---------A--AATEAAGMRLGGLLYQLVQERRANP-------GDDLISALITTE 216 (403)
T ss_dssp HHHHHHHHHHS---BS---S--SC---------H--HHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHTSC
T ss_pred HHHHHHHHHHH---hc---c--Cc---------H--HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhc
Confidence 23333222211 10 0 01 1 3455666778888888888876532 168999999764
Q ss_pred HhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHH
Q 038171 285 KHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364 (509)
Q Consensus 285 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i 364 (509)
.+ +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+ .|++|||
T Consensus 217 ~~---~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~i 274 (403)
T 3aba_A 217 DP---DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP-------------------SLVGNAV 274 (403)
T ss_dssp CT---TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------GGHHHHH
T ss_pred cC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------------------HHHHHHH
Confidence 32 2369999999999999999999999999999999999999999999984 3799999
Q ss_pred HhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCC
Q 038171 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAG 444 (509)
Q Consensus 365 ~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G 444 (509)
+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||. ..++|||+|
T Consensus 275 ~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G 344 (403)
T 3aba_A 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRP----------APHLAFGFG 344 (403)
T ss_dssp HHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCG
T ss_pred HHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCC----------CCccCCCCC
Confidence 9999999999966789999999999999999999999999999999999999999999982 347999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 445 RRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 445 ~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
+|.|+|++||++|++++++.||++| ++++.++. .+ +....+.+.++...+.|++++|+
T Consensus 345 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~--~~~~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 345 AHQCIGQQLARIELQIVFETLFRRLPGLRLAKPV--EE--LRFRHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp GGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GG--SCBCTTBSSCCBSCCEEECCCCC
T ss_pred CccCcCHHHHHHHHHHHHHHHHHhCCCceecCCc--cc--cccccCcccCCcceeEEEecCCC
Confidence 9999999999999999999999999 58876542 12 23344566778889999999985
No 34
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=2.1e-63 Score=479.97 Aligned_cols=407 Identities=15% Similarity=0.188 Sum_probs=309.2
Q ss_pred CCCCCCCCCCCCcccccccCCC---C-CCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCc
Q 038171 29 YASSLPPGPKGLPFIGNLHQFD---S-SKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPA 103 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~---~-~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~ 103 (509)
.++++||| ++|++.+.. . .+++..+.++++ ||||++++. |+.++++|++|+.++++++++ ..|+.++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 35667787 889876552 1 346778888876 799999998 678999999999999999754 45666654
Q ss_pred -hhhh---h-c-c---cc---CCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCcc
Q 038171 104 -SVAT---Q-R-L---TY---NGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQV 171 (509)
Q Consensus 104 -~~~~---~-~-~---~~---~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v 171 (509)
.... . . . .. .....++..+|+.|+++||. +.+.|+++.++.+.+.++++++++++.+.+ .++++
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~ 151 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGL-TLNWFQPASIRKLEENIRRIAQASVQRLLD---FDGEC 151 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHH-HHTTSSHHHHGGGHHHHHHHHHHHHHHHHT---SSSEE
T ss_pred cccCCcccccchhccccccccccccccccCChHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHH---hCCCe
Confidence 2111 1 1 1 11 11234556679999999998 689999999999999999999999999975 23579
Q ss_pred chHHH-HHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHH
Q 038171 172 NLSEK-TMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQES 250 (509)
Q Consensus 172 d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~ 250 (509)
|+... ...+++++|+.+ ||.+.+. .+.+.+....+..... .....+|++.++. ....++..++.+.+
T Consensus 152 d~~~~~~~~~~~~vi~~~-fG~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~--~~~~~~~~~~~~~~ 219 (428)
T 1cpt_A 152 DFMTDCALYYPLHVVMTA-LGVPEDD-------EPLMLKLTQDFFGVHE--PDEQAVAAPRQSA--DEAARRFHETIATF 219 (428)
T ss_dssp EHHHHTTTTHHHHHHHHH-HTCCGGG-------HHHHHHHHHTTTCC--------------------CHHHHHHHHHHHH
T ss_pred ehHHHHHhhhHHHHHHHH-cCCCHhH-------HHHHHHHHHHHHhccc--ccccccccccccc--hhhHHHHHHHHHHH
Confidence 99855 467999999999 9986542 2233332222211100 0111234433220 12234566777888
Q ss_pred HHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHH
Q 038171 251 DRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRV 330 (509)
Q Consensus 251 ~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~ 330 (509)
.+++.+.+++++++. ..|+++.|+++..+ +..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus 220 ~~~~~~~i~~r~~~~-------~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~ 289 (428)
T 1cpt_A 220 YDYFNGFTVDRRSCP-------KDDVMSLLANSKLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQ 289 (428)
T ss_dssp HHHHHHHHHHHTTSC-------CSSHHHHHHHCBSS---SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHcCC-------CCcHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 899999999887632 17899999976432 23699999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCC
Q 038171 331 MKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDP 410 (509)
Q Consensus 331 q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~ 410 (509)
|+++++|++ |++|||+|+||++|+++. ++|.+++|++++||.||||+.|+++.+++||||
T Consensus 290 ~~~l~~E~~-------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp 349 (428)
T 1cpt_A 290 LALAKSDPA-------------------LIPRLVDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDE 349 (428)
T ss_dssp HHHHHHCGG-------------------GHHHHHHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHhHH-------------------HHHHHHHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCCh
Confidence 999999853 899999999999999996 789999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcce-eeCCCCCCCCcCCCCCCCC
Q 038171 411 EAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD-WEMPPGMKKQDLDFDSLSG 489 (509)
Q Consensus 411 ~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~ 489 (509)
++|+||++||||||.+ .++|||+|+|.|+|++||++|++++++.|+++|+ +++..+ ..+ ...
T Consensus 350 ~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~----~~~ 412 (428)
T 1cpt_A 350 EVFSNPDEFDITRFPN----------RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGP---PRL----VAT 412 (428)
T ss_dssp TTCSSTTSCCTTCCSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSC---CEE----CCC
T ss_pred hhCCChhhcCCCCCCC----------CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCC---ccc----ccC
Confidence 9999999999999941 2799999999999999999999999999999998 787532 111 122
Q ss_pred ceeeeccceEEEEeec
Q 038171 490 ITVHKKNFLVLLAKYH 505 (509)
Q Consensus 490 ~~~~~~~~~~~~~~~~ 505 (509)
........+.|+++||
T Consensus 413 ~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 413 NFVGGPKNVPIRFTKA 428 (428)
T ss_dssp SSBCSEEECEEEEEEC
T ss_pred ccccCcceeeEEeeCC
Confidence 2233344788888875
No 35
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=6e-62 Score=466.18 Aligned_cols=388 Identities=18% Similarity=0.245 Sum_probs=305.9
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEee-cCcc-EEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRI-GFVP-TLIVSSAKMAKETLKAHDLQFSGRPASVATQ 108 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~-~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~ 108 (509)
.+.+|+|+.+|+.++ + ..+++.++.+++ +||||+++++ +|.+ .++|+||+.+++++.++ .|..++......
T Consensus 7 ~~~~~~~~~~p~~~~---~-~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~ 79 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---P-GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQV 79 (406)
T ss_dssp -CCSCCEEECCCCCC---C-TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTB
T ss_pred hhhccCCCCCCCCcc---c-ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCc
Confidence 356778887888777 2 578999999886 7999999996 6766 99999999999999863 465554322111
Q ss_pred ----c-cccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHH
Q 038171 109 ----R-LTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSC 182 (509)
Q Consensus 109 ----~-~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~ 182 (509)
. ....+. .++..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.+ .++++|+...+ ..+++
T Consensus 80 ~~~~~~~~~~~~-~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~ 154 (406)
T 1s1f_A 80 TRLAPHFIPARG-AVGFLDPPDHTRLRRS-VAAAFTARGVERVRERSRGMLDELVDAMLR---AGPPADLTEAVLSPFPI 154 (406)
T ss_dssp CBSSSSCSSCTT-SGGGCCTTHHHHHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTHHHH
T ss_pred cccccccccccc-ccccCCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhHhHH
Confidence 0 111133 3455689999999998 788999999999999999999999999974 35689998776 47999
Q ss_pred HHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 038171 183 NTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHL 262 (509)
Q Consensus 183 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (509)
++++. +||.+.+. .+.+......+..... | .++..++.+.+.+++.+.+++++
T Consensus 155 ~vi~~-~~G~~~~~-------~~~~~~~~~~~~~~~~--------~-----------~~~~~~~~~~~~~~~~~~i~~r~ 207 (406)
T 1s1f_A 155 AVICE-LMGVPATD-------RHSMHTWTQLILSSSH--------G-----------AEVSERAKNEMNAYFSDLIGLRS 207 (406)
T ss_dssp HHHHH-HHTCCGGG-------HHHHHHHHHHHHHHHT--------T-----------CCCCHHHHTHHHHHHHHHHHTSC
T ss_pred HHHHH-HhCCCHHH-------HHHHHHHHHHHHhccC--------C-----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 59986542 2334433333322110 1 01233455677788888888876
Q ss_pred CccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 038171 263 DPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLV 342 (509)
Q Consensus 263 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~ 342 (509)
++. .+|+++.|+++..+ ..++++++.+++..+++|| |||+++++|++++|++||++|+++++|+
T Consensus 208 ~~~-------~~d~l~~ll~~~~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~---- 271 (406)
T 1s1f_A 208 DSA-------GEDVTSLLGAAVGR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEP---- 271 (406)
T ss_dssp CSC-------CCSHHHHHHHHHHT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCG----
T ss_pred hCC-------CCCHHHHHHHhhcc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCH----
Confidence 542 17999999987653 3699999999999999999 9999999999999999999999999985
Q ss_pred CCCCCCCChhhhccchhHHHHHHhhhccCCCCc-ccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCC
Q 038171 343 GGNKSFVDEDDVQELHYLKAVVKETMRLQPPAP-LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP 421 (509)
Q Consensus 343 ~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~-~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P 421 (509)
.|++|||+|+||++|++| ..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||
T Consensus 272 ---------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P 336 (406)
T 1s1f_A 272 ---------------EIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDF 336 (406)
T ss_dssp ---------------GGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCT
T ss_pred ---------------HHHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCC
Confidence 279999999999999999 5578999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEE
Q 038171 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVL 500 (509)
Q Consensus 422 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (509)
|||. ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++. .+ +....+...+....+.|
T Consensus 337 eR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~--~~~~~~~~~~~~~~lpv 402 (406)
T 1s1f_A 337 ERSP----------NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAP--ED--VPFKKGALIRGPEALPV 402 (406)
T ss_dssp TC------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GG--SCBCSSCSBCCBSCCEE
T ss_pred CCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--cc--ceeccCcccCCcceeEE
Confidence 9995 2479999999999999999999999999999999 79987652 12 22233445556667777
Q ss_pred EE
Q 038171 501 LA 502 (509)
Q Consensus 501 ~~ 502 (509)
++
T Consensus 403 ~~ 404 (406)
T 1s1f_A 403 TW 404 (406)
T ss_dssp EC
T ss_pred ee
Confidence 65
No 36
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=3.1e-62 Score=469.10 Aligned_cols=371 Identities=16% Similarity=0.238 Sum_probs=296.7
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhh-CCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKY-GPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ 108 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~ky-G~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~ 108 (509)
...||+|+++|.+.....+ ..+++..+.+| ++| |||+++++ |+.++++|+||+++++++.++. +..++....+.
T Consensus 4 ~~~~~~~~~~P~~~~~~~~-~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~ 79 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSC-PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFP 79 (412)
T ss_dssp ----CCCCSSCBSSCCCSS-TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSC
T ss_pred CCCCCCCCCCCCCCCCchh-ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccc
Confidence 3456788888866333344 67899999999 777 99999997 8899999999999999998653 33332211111
Q ss_pred ccc-----c-CCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHH-hH
Q 038171 109 RLT-----Y-NGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMS-LS 181 (509)
Q Consensus 109 ~~~-----~-~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~-~~ 181 (509)
... . ...+.++..+|+.|+++||. +.+.|++..++.+.+.+++.++++++.+.. .++++|+...+.. ++
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~ 155 (412)
T 2zbx_A 80 ATSPRFEAVRESPQAFIGLDPPEHGTRRRM-TISEFTVKRIKGMRPEVEEVVHGFLDEMLA---AGPTADLVSQFALPVP 155 (412)
T ss_dssp CCSGGGC----CCCCGGGCCTTHHHHHHTT-TGGGGSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHH
T ss_pred ccccccccccccccccccCCcHHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHH
Confidence 100 0 01223555689999999998 788999999999999999999999999974 3568999998874 89
Q ss_pred HHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 038171 182 CNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEH 261 (509)
Q Consensus 182 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 261 (509)
+++++. +||.+.+ ..+.+......+... .+ . ++..++.+.+.+++.++++++
T Consensus 156 ~~vi~~-~~G~~~~-------~~~~~~~~~~~~~~~---------~~---------~--~~~~~~~~~~~~~~~~~i~~r 207 (412)
T 2zbx_A 156 SMVICR-LLGVPYA-------DHEFFQDASKRLVQS---------TD---------A--QSALTARNDLAGYLDGLITQF 207 (412)
T ss_dssp HHHHHH-HHTCCGG-------GHHHHHHHHHHHHHC---------SS---------H--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCHH-------HHHHHHHHHHHHhcc---------Cc---------H--HHHHHHHHHHHHHHHHHHHHH
Confidence 999997 6998653 223343333332210 00 1 345566777888888888887
Q ss_pred cCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHh
Q 038171 262 LDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSL 341 (509)
Q Consensus 262 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~ 341 (509)
+++. .+|+++.|+++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 208 ~~~~-------~~d~l~~ll~~~~~~---~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--- 274 (412)
T 2zbx_A 208 QTEP-------GAGLVGALVADQLAN---GEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR--- 274 (412)
T ss_dssp HHSC-------CSSHHHHHHHTTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG---
T ss_pred HhCC-------CCCHHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh---
Confidence 6532 178999999865422 369999999999999999999999999999999999999999999874
Q ss_pred hCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCC
Q 038171 342 VGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNP 421 (509)
Q Consensus 342 ~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P 421 (509)
.|++|||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||
T Consensus 275 ----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~P 338 (412)
T 2zbx_A 275 ----------------SLVPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDI 338 (412)
T ss_dssp ----------------GGHHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCT
T ss_pred ----------------HhHHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCC
Confidence 3799999999999999997678999999999999999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCC
Q 038171 422 ERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPG 476 (509)
Q Consensus 422 ~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~ 476 (509)
||| ...++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus 339 eR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 384 (412)
T 2zbx_A 339 HRS----------ARHHLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVP 384 (412)
T ss_dssp TSC----------CTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCC----------CCCccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence 997 13589999999999999999999999999999999 7988653
No 37
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=1.1e-62 Score=486.27 Aligned_cols=410 Identities=15% Similarity=0.208 Sum_probs=301.2
Q ss_pred cCCCCCCCCCCCCCcccccccCCC----CCCCchhHHHHHhhhCC-eEEEeecCccE-------EEecCHHHHHHHHHhC
Q 038171 27 SSYASSLPPGPKGLPFIGNLHQFD----SSKPHVSFWELSKKYGP-LMSLRIGFVPT-------LIVSSAKMAKETLKAH 94 (509)
Q Consensus 27 ~~~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~kyG~-v~~i~~~~~~~-------vvv~dp~~~~~i~~~~ 94 (509)
...+.+.||||+++|++||++++. ..+++.++.++++|||+ ||++++++.++ +++.+++..+.++...
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 345667899999999999997764 57888999999999999 99999998888 6667777666555432
Q ss_pred C----ccc-cCCCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCC
Q 038171 95 D----LQF-SGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASK 169 (509)
Q Consensus 95 ~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 169 (509)
. ..+ ...+.. ...........++..+|+.|+++|++ +.+.|+... +.+.+.+++.++++++.|.....+++
T Consensus 103 ~v~k~~~~~~~~~~~--~~l~g~~~~~~~~~~~g~~h~~~R~~-~~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~ 178 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPS--TELTGGYRILSYLDPSEPKHEKLKNL-LFFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKG 178 (495)
T ss_dssp TEECSSCTTSSSCCC--GGGGTTCCCGGGCCTTSHHHHHHHHH-HHHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccCCCC--ccccCCCcceeeeCCCchHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 1 111 111211 11111111334555689999999998 678888754 88999999999999999987555567
Q ss_pred ccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHH
Q 038171 170 QVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQE 249 (509)
Q Consensus 170 ~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~ 249 (509)
++|+.+++..+++++++.++||.+....+ ..+.+...+..+............+|
T Consensus 179 ~vdl~~~~~~~~~~~i~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~p--------------------- 233 (495)
T 3dsk_A 179 KADFGGSSDGTAFNFLARAFYGTNPADTK----LKADAPGLITKWVLFNLHPLLSIGLP--------------------- 233 (495)
T ss_dssp SEESHHHHHHHHHHHHHHHHHSCCGGGST----TTTCHHHHHHHHHHHHHGGGCCCSSC---------------------
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCcchhh----hhhhHHHHHHHHHHHhhhhHhHhccH---------------------
Confidence 99999999999999999999998876531 22333333333322111101111122
Q ss_pred HHHHHHHHHHhhcCcccc-----cccc--CcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH-HhcCCchHhHHHHHH
Q 038171 250 SDRFYQELIDEHLDPKRT-----KADM--QQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIF-VAGTDTSAATLVWTM 321 (509)
Q Consensus 250 ~~~~~~~~i~~~~~~~~~-----~~~~--~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tta~~l~~~l 321 (509)
+++..++.++...... .... ...+.++.+++...+ ..++++++..+++.++ +||+|||+.+++|++
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l 307 (495)
T 3dsk_A 234 --RVIEEPLIHTFSLPPALVKSDYQRLYEFFLESAGEILVEADK----LGISREEATHNLLFATCFNTWGGMKILFPNMV 307 (495)
T ss_dssp --HHHHHHHHSSSCCCGGGGHHHHHHHHHHHHHHCHHHHHHHHH----TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhhcccchhhhhhHHHHHHHHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 1112222222111000 0000 002233455555433 2699999998776665 999999999999999
Q ss_pred HHHhh-ChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc----cCceeCCC
Q 038171 322 TYLMK-HPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII----DGYEIPAK 396 (509)
Q Consensus 322 ~~L~~-~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~----~g~~ip~g 396 (509)
++|+. ||++|++|++|++++++..++.++++++++||||+|||+||||++|++|... |.+.+|+++ +||.||||
T Consensus 308 ~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG 386 (495)
T 3dsk_A 308 KRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAG 386 (495)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTT
T ss_pred HHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCC
Confidence 99996 9999999999999999876577999999999999999999999999999865 678999999 49999999
Q ss_pred CEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCce---------eecccCCCCCCCChhHHHHHHHHHHHHhHh
Q 038171 397 TLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE---------FIPFGAGRRICPGMHLGIATVDLALANLLY 467 (509)
Q Consensus 397 ~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~---------~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~ 467 (509)
+.|+++.+++||||++|+||++|||+||++++.. .... +++||+|+|.|+|++||.+|++++++.|++
T Consensus 387 ~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~~~---~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~ 463 (495)
T 3dsk_A 387 EMLYGYQPLATRDPKIFDRADEFVPERFVGEEGE---KLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFR 463 (495)
T ss_dssp CEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHHHH---HGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHH
T ss_pred CEEEeccHHhhCCcccCCCccccCCcccCCCCcc---chhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999975321 1122 445555669999999999999999999999
Q ss_pred cceeeCCC
Q 038171 468 KFDWEMPP 475 (509)
Q Consensus 468 ~~~~~~~~ 475 (509)
+|++...+
T Consensus 464 ~f~~~~~~ 471 (495)
T 3dsk_A 464 RYDSFDIE 471 (495)
T ss_dssp HEEEEEEE
T ss_pred HCceEeCC
Confidence 99987544
No 38
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=4.7e-62 Score=467.60 Aligned_cols=382 Identities=21% Similarity=0.324 Sum_probs=301.2
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc--hhhhhccc-----c--CCcceEecC
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA--SVATQRLT-----Y--NGLDLIFSP 121 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~--~~~~~~~~-----~--~~~~~~~~~ 121 (509)
..+++..+.+| ++||||+++++++.++++|+||+.+++++.++. +..++. ........ . .+.+.++..
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTA 90 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccccc
Confidence 57889999999 999999999998899999999999999998653 233321 11000000 0 012245667
Q ss_pred CchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH-HhHHHHHHHHHhcCCCCCCccc
Q 038171 122 YGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM-SLSCNTICRLAFGKRSDGNEEA 200 (509)
Q Consensus 122 ~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~~~ 200 (509)
+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.+. .+++++|+..++. .+++++++. +||.+.+
T Consensus 91 ~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~----- 162 (408)
T 1odo_A 91 YGPNHRKLRRL-VAPAFSARRVDAMRPAVEAMVTGLVDRLAEL-PAGEPVDLRQELAYPLPIAVIGH-LMGVPQD----- 162 (408)
T ss_dssp CHHHHHHHHHT-TGGGGSHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHH-----
T ss_pred CChHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchHHHHhhhhHHHHHHH-HhCCCHH-----
Confidence 89999999998 7899999999999999999999999999753 2367899999887 599999996 6997542
Q ss_pred hhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHH
Q 038171 201 ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVL 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 280 (509)
..+.+......+... . .+ .++..++.+.+.+++.+++++++++. ..|+++.|
T Consensus 163 --~~~~~~~~~~~~~~~------~--~~-----------~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~l 214 (408)
T 1odo_A 163 --RRDGFRALVDGVFDT------T--LD-----------QAEAQANTARLYEVLDQLIAAKRATP-------GDDMTSLL 214 (408)
T ss_dssp --HHHHHHHHHHHHHCT------T--CC-----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH
T ss_pred --HHHHHHHHHHHHhcc------c--CC-----------HHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCHHHHH
Confidence 222333333322110 0 01 12345566778888888888776431 17899999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhH
Q 038171 281 LQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYL 360 (509)
Q Consensus 281 l~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l 360 (509)
+++..+...+..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+ +|+
T Consensus 215 l~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-------------------~~l 275 (408)
T 1odo_A 215 IAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE-------------------VTW 275 (408)
T ss_dssp HHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-------------------SCH
T ss_pred HHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------------------HHH
Confidence 9876432112369999999999999999999999999999999999999999999862 369
Q ss_pred HHHHHhhhccCCCCcccccccccCCcccc-CceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceee
Q 038171 361 KAVVKETMRLQPPAPLLVPRETTEKSIID-GYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439 (509)
Q Consensus 361 ~a~i~EtlRl~p~~~~~~~R~~~~~~~~~-g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~ 439 (509)
+|||+|+||++|++|..++|.+.+|++++ ||.||||+.|+++.+++||||++|+||++|||||| ...++
T Consensus 276 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~ 345 (408)
T 1odo_A 276 ADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHL 345 (408)
T ss_dssp HHHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCC
T ss_pred HHHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCC
Confidence 99999999999999976789999999999 99999999999999999999999999999999994 23589
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171 440 PFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY 504 (509)
Q Consensus 440 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (509)
|||+|+|.|+|++||++|++++++.|+++| ++++..+. .+ +....+.+.++...+.|+++|
T Consensus 346 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 346 AFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPA--EE--LPPVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp TTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTT--SC--CCBCSCSSBCCBSCCEEECC-
T ss_pred CCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCc--cc--cccccCccccCcccceEEecC
Confidence 999999999999999999999999999999 79886432 12 233455677778899998875
No 39
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=2.3e-62 Score=469.71 Aligned_cols=377 Identities=18% Similarity=0.267 Sum_probs=298.7
Q ss_pred CCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCchhhhhc---ccc---CCcceEecCCc
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQR---LTY---NGLDLIFSPYG 123 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~g 123 (509)
..+++..+.+| ++||||+++++ |+.++++|+||+.+++++.++. +..++....+.. ... ...+.++..+|
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 99 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDD 99 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCCT
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCCc
Confidence 57889999999 89999999997 8899999999999999998643 333322001100 000 01123555689
Q ss_pred hhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH-HhHHHHHHHHHhcCCCCCCccchh
Q 038171 124 EYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM-SLSCNTICRLAFGKRSDGNEEAIS 202 (509)
Q Consensus 124 ~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~ 202 (509)
+.|+++||. +.+.|++..++.+.+.++++++++++.+.. .++++|+...+. .+++++++. +||.+.+
T Consensus 100 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~------- 167 (408)
T 3abb_A 100 PVHARQRRM-LIPSFGVKRMNAIRPRLQSLVDRLLDDMLA---KGPGADLVSAFALPVPSVAICE-LLGVPYG------- 167 (408)
T ss_dssp THHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG-------
T ss_pred hHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHH-------
Confidence 999999998 788999999999999999999999999974 356899999876 489999997 6998653
Q ss_pred hhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHH
Q 038171 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQ 282 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~ 282 (509)
..+.+......+... . . . ++..++.+.+.+++.+++++++++. .+|+++.|++
T Consensus 168 ~~~~~~~~~~~~~~~------~--~----------~--~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~ 220 (408)
T 3abb_A 168 DHDFFEECSRNFVGA------A--T----------S--AEADAAFGELYTYLHGLVGRKQAEP-------EDGLLDELIA 220 (408)
T ss_dssp GHHHHHHHHHHHC--------------------------CCSSHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHH
T ss_pred HHHHHHHHHHHHhcc------c--c----------h--HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHh
Confidence 223333333222110 0 0 0 2233445567778888888766532 1789999998
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHH
Q 038171 283 IRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362 (509)
Q Consensus 283 ~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a 362 (509)
+..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+ .|++|
T Consensus 221 ~~~~~---~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-------------------~~l~a 278 (408)
T 3abb_A 221 RQLEE---GDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDP-------------------GAVSG 278 (408)
T ss_dssp HHHTS---SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCH-------------------HHHHH
T ss_pred cccCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------------HhHHH
Confidence 76533 369999999999999999999999999999999999999999999864 27999
Q ss_pred HHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeeccc
Q 038171 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFG 442 (509)
Q Consensus 363 ~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg 442 (509)
||+|+||++|++| .++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+|| ...++|||
T Consensus 279 ~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG 347 (408)
T 3abb_A 279 VVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRN----------ARHHVGFG 347 (408)
T ss_dssp HHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC----------CTTCCTTC
T ss_pred HHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCC----------CCCCCCCC
Confidence 9999999999999 588999999999999999999999999999999999999999999996 13589999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 443 AGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 443 ~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
+|+|.|+|++||++|++++++.||++| ++++..+. .+ .....+.+.++...+.|++++|.
T Consensus 348 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 348 HGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPL--DE--VPIKAGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp CGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--SCBCCTTSCCSBSCCEEECSCCC
T ss_pred CCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCc--cc--cccccCcccCCcceeEEEeCCCC
Confidence 999999999999999999999999999 79886432 12 22234556677789999988873
No 40
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=6.1e-62 Score=467.28 Aligned_cols=391 Identities=19% Similarity=0.257 Sum_probs=305.2
Q ss_pred CCCCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh
Q 038171 29 YASSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ 108 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~ 108 (509)
++...+|||+. ..+++..+.++++ |||| +.++.+.++|+||+.+++++.++ ..|..++.... .
T Consensus 16 ~pl~~~PGp~~-----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~ 78 (411)
T 2jjn_A 16 TTIDEVPGMAD-----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI-E 78 (411)
T ss_dssp -CCCSCCCSSC-----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS-T
T ss_pred CCCCCCCCccc-----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC-C
Confidence 45667788872 2467788899986 9998 56778899999999999999865 35666653221 1
Q ss_pred ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHH-HHHhHHHHHHH
Q 038171 109 RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEK-TMSLSCNTICR 187 (509)
Q Consensus 109 ~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~vi~~ 187 (509)
.... +...++..+|+.|+++||. +.+.|++..++.+.+.+++.++++++. .++++|+... ...+++++++.
T Consensus 79 ~~~~-~~~~~~~~~g~~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~------~~~~~d~~~~~~~~~~~~vi~~ 150 (411)
T 2jjn_A 79 GASP-TPGMIHEIDPPEHRALRKV-VSSAFTPRTISDLEPRIRDVTRSLLAD------AGESFDLVDVLAFPLPVTIVAE 150 (411)
T ss_dssp TCCC-CTTCGGGCCTTHHHHHHHH-HHHHSCHHHHHTTHHHHHHHHHHHHHT------SCSEEEHHHHTTTHHHHHHHHH
T ss_pred cccc-cccccccCCchHHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHhc------CCCceeHHHHHHHHHHHHHHHH
Confidence 1111 2234555689999999998 789999999999999999999999887 2458999855 56899999999
Q ss_pred HHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccc
Q 038171 188 LAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRT 267 (509)
Q Consensus 188 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 267 (509)
+ ||.+.+..+ .+.+....+.... .|.+ +. +...++..++.+.+.+++.+.+++++++.
T Consensus 151 ~-fG~~~~~~~-------~~~~~~~~~~~~~--------~~~~--~~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~~-- 208 (411)
T 2jjn_A 151 L-LGLPPMDHE-------QFGDWSGALVDIQ--------MDDP--TD--PALAERIADVLNPLTAYLKARCAERRADP-- 208 (411)
T ss_dssp H-HTCCSCCCS-------TTCCHHHHHHHSC--------CSCT--TC--HHHHHHHHHHHHHHHHHHHHHHHHHHHSC--
T ss_pred H-cCCCHHHHH-------HHHHHHHHHHhcc--------Cccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 8 999875422 1222222222211 1110 00 12234566677788888999988876531
Q ss_pred ccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCC
Q 038171 268 KADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKS 347 (509)
Q Consensus 268 ~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~ 347 (509)
..|+++.|+++..+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++
T Consensus 209 -----~~d~l~~ll~~~~~---~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------- 272 (411)
T 2jjn_A 209 -----GDDLISRLVLAEVD---GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG-------- 272 (411)
T ss_dssp -----CSSHHHHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG--------
T ss_pred -----CCCHHHHHHhcccC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH--------
Confidence 17999999976432 23699999999999999999999999999999999999999999999863
Q ss_pred CCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCC
Q 038171 348 FVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDR 427 (509)
Q Consensus 348 ~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~ 427 (509)
|++|||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||.+
T Consensus 273 -----------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~- 339 (411)
T 2jjn_A 273 -----------RIPAIVEEVLRYRPPFPQ-MQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG- 339 (411)
T ss_dssp -----------GHHHHHHHHHHHSCSSCE-EEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS-
T ss_pred -----------hHHHHHHHHhhhCCCcCC-cceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC-
Confidence 899999999999999996 7899999999999999999999999999999999999999999999852
Q ss_pred CCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcce-eeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 428 SVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD-WEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 428 ~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
...++|||+|+|.|+|++||++|++++++.|+++|+ +++..+ .+++ ...+........+.|+++++.
T Consensus 340 -------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~~~~~~~lpv~~~~~~ 407 (411)
T 2jjn_A 340 -------GAAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRD---DERL--RHFEQIVLGTRHLPVLAGSSP 407 (411)
T ss_dssp -------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCS---SCCC--CBCCSSSSSBSCCEEECSCCT
T ss_pred -------CCCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCC---Ccee--ccccccccCcceeEEEecCCC
Confidence 125899999999999999999999999999999996 998632 2221 133445556668888888876
Q ss_pred c
Q 038171 507 Y 507 (509)
Q Consensus 507 ~ 507 (509)
+
T Consensus 408 r 408 (411)
T 2jjn_A 408 R 408 (411)
T ss_dssp T
T ss_pred C
Confidence 5
No 41
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=9e-62 Score=465.02 Aligned_cols=378 Identities=18% Similarity=0.264 Sum_probs=303.1
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh-----hccccCCcceEecCCchh
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT-----QRLTYNGLDLIFSPYGEY 125 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~ 125 (509)
..+++.++.+| ++||||+++++++.+.++|+||+.+++++.++. |..++..... ......+. .++..+|+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTP-MMILMDPPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSC-CGGGCCTTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCccccc-ccccCCchH
Confidence 57889999999 899999999999999999999999999998753 6665532210 01111233 345568999
Q ss_pred HHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHH-HHHhHHHHHHHHHhcCCCCCCccchhhh
Q 038171 126 WREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEK-TMSLSCNTICRLAFGKRSDGNEEAISGR 204 (509)
Q Consensus 126 w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (509)
|+++||. +.+.|++..++.+.+.+.++++++++.+.. ++++|+... ...+++++|+.+ ||.+.+ ..
T Consensus 95 h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~-------~~ 161 (411)
T 3a4g_A 95 HTRLRKL-VGRSFTVRRMNELEPRITEIADGLLAGLPT----DGPVDLMREYAFQIPVQVICEL-LGVPAE-------DR 161 (411)
T ss_dssp HHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHHHHHSCS----SSCEEHHHHTTTTHHHHHHHHH-HTCCGG-------GH
T ss_pred HHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHHHHHhHHHHHHHH-hCCCHH-------HH
Confidence 9999998 789999999999999999999999998853 368999755 468999999975 998653 12
Q ss_pred hHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHH
Q 038171 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIR 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (509)
+.+......+.. . .|. ++..++.+.+.+++.+.+++++++. ..|+++.|+++.
T Consensus 162 ~~~~~~~~~~~~---~------~p~-----------~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~ 214 (411)
T 3a4g_A 162 DDFSAWSSVLVD---D------SPA-----------DDKNAAMGKLHGYLSDLLERKRTEP-------DDALLSSLLAVS 214 (411)
T ss_dssp HHHHHHHHHHTT---S------SCT-----------TTHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCC
T ss_pred HHHHHHHHHHhc---c------CCH-----------HHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhh
Confidence 233333222211 0 120 1234556677888888888776531 178999999764
Q ss_pred HhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHH
Q 038171 285 KHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364 (509)
Q Consensus 285 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i 364 (509)
.+. +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+ .|++|||
T Consensus 215 ~~~--~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~i 273 (411)
T 3a4g_A 215 DED--GDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP-------------------SLISSAV 273 (411)
T ss_dssp CTT--CCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------GGHHHHH
T ss_pred ccC--CCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH-------------------HHHHHHH
Confidence 311 2369999999999999999999999999999999999999999999984 3899999
Q ss_pred HhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCC
Q 038171 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAG 444 (509)
Q Consensus 365 ~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G 444 (509)
+|+||++|++|..++|.+.+|++++||.||+|+.|+++.+++||||++|+||++|||+||. ..++|||+|
T Consensus 274 ~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G 343 (411)
T 3a4g_A 274 EEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDA----------SGGVFFGHG 343 (411)
T ss_dssp HHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCS
T ss_pred HHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCC----------CCCCCCCCC
Confidence 9999999999966889999999999999999999999999999999999999999999983 247999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeeccc
Q 038171 445 RRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEY 507 (509)
Q Consensus 445 ~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (509)
+|.|+|++||++|++++++.||++| ++++.++. .+ +....+.+..+...+.|++++|.-
T Consensus 344 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~--~~~~~~~~~~~~~~lpv~~~~r~~ 403 (411)
T 3a4g_A 344 IHFCLGAQLARLEGRVAIGRLFADRPELALAVGL--DE--LVYRESTLVRGLSRMPVTMGPRSA 403 (411)
T ss_dssp TTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCBCCCTTBCCBSCCEEECCCCCC
T ss_pred CccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCc--cc--cccccCccccCcceeEEEecCcch
Confidence 9999999999999999999999999 69886532 12 222345566677899999998864
No 42
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=1.6e-61 Score=464.17 Aligned_cols=380 Identities=17% Similarity=0.253 Sum_probs=299.4
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhh----hccccCCcceEecCCchhH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVAT----QRLTYNGLDLIFSPYGEYW 126 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~w 126 (509)
..+++..+.++ ++||||+++++++.++++|+||+.+++++.++ ..|..++..... ......+ ..++..+|+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQN-QMMLFQNQPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHH-TSGGGCCTTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhh-cchhhcCCchH
Confidence 35778888888 58999999999999999999999999999876 456655531110 0001112 23456689999
Q ss_pred HHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhh
Q 038171 127 REIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRS 205 (509)
Q Consensus 127 ~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (509)
+++||. +.+.|+++.++.+.+.++++++.+++.+.+ ++++|+...+ ..+++++++.+ ||.+.+ ..+
T Consensus 89 ~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~-------~~~ 155 (404)
T 3ejb_B 89 RRLRTL-ASGAFTPRTTESYQPYIIETVHHLLDQVQG----KKKMEVISDFAFPLASFVIANI-IGVPEE-------DRE 155 (404)
T ss_dssp HHHHHH-HHGGGSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTHHHHHHHHHHHH-HTCCGG-------GHH
T ss_pred HHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCcchHHHHHHHHHHHHHHHH-cCCCHH-------HHH
Confidence 999998 789999999999999999999999998863 5678986554 56899999985 887653 223
Q ss_pred HHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHH
Q 038171 206 RFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRK 285 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (509)
.+.+....+...+. .|+. ....++..++.+.+.+++.+.+++++++. ..|+++.|+ +..
T Consensus 156 ~~~~~~~~~~~~~~-------~p~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll-~~~ 214 (404)
T 3ejb_B 156 QLKEWAASLIQTID-------FTRS------RKALTEGNIMAVQAMAYFKELIQKRKRHP-------QQDMISMLL-KGR 214 (404)
T ss_dssp HHHHHHHHHHGGGS-------TTCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHH-HC-
T ss_pred HHHHHHHHHHHhcc-------CCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------cchHHHHHH-hcc
Confidence 34333333322111 1321 12344566777788888999888876432 178999999 433
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHH
Q 038171 286 HRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVK 365 (509)
Q Consensus 286 ~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~ 365 (509)
++ ..++++++..++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+
T Consensus 215 ~~---~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~ 272 (404)
T 3ejb_B 215 EK---DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPD-------------------LIGTAVE 272 (404)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG-------------------GHHHHHH
T ss_pred cC---CCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHHHHH
Confidence 32 3699999999999999999999999999999999999999999999853 7999999
Q ss_pred hhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCC
Q 038171 366 ETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGR 445 (509)
Q Consensus 366 EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~ 445 (509)
|+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||- ..++|||+|+
T Consensus 273 E~lRl~p~~~-~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~----------~~~~~Fg~G~ 341 (404)
T 3ejb_B 273 ECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP----------NPHLSFGHGH 341 (404)
T ss_dssp HHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCST
T ss_pred HHHHhCCccc-ccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCC----------CCCCCCCCcC
Confidence 9999999999 5789999999999999999999999999999999999999999999981 3479999999
Q ss_pred CCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 446 RICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 446 r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
|.|+|++||.+|++++++.|+++| ++++.++. .....+...+....+.|+++||.
T Consensus 342 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~------~~~~~~~~~~~~~~lpv~~~~~~ 397 (404)
T 3ejb_B 342 HVCLGSSLARLEAQIAINTLLQRMPSLNLADFE------WRYRPLFGFRALEELPVTFEASW 397 (404)
T ss_dssp TCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--C------CCBCSCSSBCCBSCCEEECC---
T ss_pred ccCcCHHHHHHHHHHHHHHHHHhCcccccCCCC------ceeccCcccCCcceeEEEEeccc
Confidence 999999999999999999999999 99987532 23345566667778999999874
No 43
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=1.3e-61 Score=463.63 Aligned_cols=377 Identities=16% Similarity=0.211 Sum_probs=301.8
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecC--ccEEEecCHHHHHHHHHhCCccccCCCchhhhh-cc-ccCC--cceEecCCch
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGF--VPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ-RL-TYNG--LDLIFSPYGE 124 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~--~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~g~ 124 (509)
+.+++.++.+++ +||||+++++++ .+.++|++|+.+++|+.++ .|..++...... .. ...+ ...++..+|+
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 102 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQP 102 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCch
Confidence 567778999988 899999999754 7899999999999999863 455443321110 01 1111 2345566899
Q ss_pred hHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH-HhHHHHHHHHHhcCCCCCCccchhh
Q 038171 125 YWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM-SLSCNTICRLAFGKRSDGNEEAISG 203 (509)
Q Consensus 125 ~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~ 203 (509)
.|+++|+. +.+.|+++.++.+.+.+++.++++++.+.. .++++|+..++. .+++++|+. +||.+.+.
T Consensus 103 ~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~------- 170 (411)
T 2dkk_A 103 DHNRLRRA-VAGAFTVGATKRLRPRAQEILDGLVDGILA---EGPPADLVERVLEPFPIAVVSE-VMGVPAAD------- 170 (411)
T ss_dssp HHHHHHHH-HGGGSSHHHHHHHHHHHHHHHHHHHHHHHH---HCSCEEHHHHTTTHHHHHHHHH-HHTCCSSH-------
T ss_pred HHHHHHHH-hhHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeehHHHHHHHHHHHHHHH-HhCCCHHH-------
Confidence 99999998 789999999999999999999999999975 356899998776 699999998 59987641
Q ss_pred hhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHH
Q 038171 204 RSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQI 283 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 283 (509)
.+.+..... .+.. ..+ ..++..++.+.+.+++.+++++++++. .+|+++.|+++
T Consensus 171 ~~~~~~~~~----~~~~-----~~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~dll~~ll~~ 224 (411)
T 2dkk_A 171 RERVHSWTR----QIIS-----TSG----------GAEAAERAKRGLYGWITETVRARAGSE-------GGDVYSMLGAA 224 (411)
T ss_dssp HHHHHHHHG----GGCS-----SCS----------CSHHHHHHHHHHHHHHHHHHHTTTTCC-------SSCHHHHHHHH
T ss_pred HHHHHHHHH----HHHh-----ccc----------hHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHh
Confidence 122222111 1110 011 113345667788888999998876542 17899999987
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHH
Q 038171 284 RKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363 (509)
Q Consensus 284 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~ 363 (509)
.++ ..++++++.+++..+++|| |||+++++|++++|++||++|++|++|++ |++||
T Consensus 225 -~~~---~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~ 280 (411)
T 2dkk_A 225 -VGR---GEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERPG-------------------ARGTA 280 (411)
T ss_dssp -HHT---TSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCTT-------------------CCHHH
T ss_pred -cCC---CCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HHHHH
Confidence 433 3689999999999999999 99999999999999999999999999852 78999
Q ss_pred HHhhhccCCCCccc-ccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeeccc
Q 038171 364 VKETMRLQPPAPLL-VPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFG 442 (509)
Q Consensus 364 i~EtlRl~p~~~~~-~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg 442 (509)
|+|+||++|+++.. ++|.+.+|++++|+.||+|+.|+++.+++||||++|+||++|||+||. ..++|||
T Consensus 281 i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG 350 (411)
T 2dkk_A 281 LDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDP----------NPHLAYG 350 (411)
T ss_dssp HHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSS----------CCCCTTC
T ss_pred HHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCC----------CCCCCCC
Confidence 99999999999966 789999999999999999999999999999999999999999999994 3489999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 443 AGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 443 ~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
+|+|.|+|++||.+|++++++.|+++| ++++.++. .++ ....+.+.+....+.|++++|+
T Consensus 351 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~~--~~~~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 351 NGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPA--EQV--AWRRKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp CSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCG--GGC--CBCCSSSBCCBSCCEEECCCCC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCc--ccc--ccccCcccCCcceeEEEeccCC
Confidence 999999999999999999999999999 89987642 122 2233455667779999999985
No 44
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=3.3e-62 Score=467.33 Aligned_cols=375 Identities=14% Similarity=0.170 Sum_probs=301.9
Q ss_pred CCCCchhHHHHHhhh--CCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHH
Q 038171 51 SSKPHVSFWELSKKY--GPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWRE 128 (509)
Q Consensus 51 ~~~~~~~~~~~~~ky--G~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 128 (509)
..+++.++.+|+++| |||++++.++ +.++|+||+.+++++++ ...|..++....... ...+...++..+|+.|++
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYE-TGEFELMMAGQDDPVHKK 94 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC-----CCCTTTTCCTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCC-CcccccCcccCCchHHHH
Confidence 578999999999999 9999999885 59999999999999954 445665554322111 112333456678999999
Q ss_pred HHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhhHH
Q 038171 129 IRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRSRF 207 (509)
Q Consensus 129 ~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 207 (509)
+||. +.+.|++..++.+.+.+.++++++++.+.+ +.++|+...+ ..+++++++. +||.+.+ ..+.+
T Consensus 95 ~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-------~~~~~ 161 (398)
T 4fb2_A 95 YRQL-VAKPFSPEATDLFTEQLRQSTNDLIDARIE----LGEGDAATWLANEIPARLTAI-LLGLPPE-------DGDTY 161 (398)
T ss_dssp HHHH-HHTTTCHHHHHTTHHHHHHHHHHHHHTTTT----TTEEEHCCCCCTTHHHHHHHH-HTTSCGG-------GHHHH
T ss_pred HHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHH-------HHHHH
Confidence 9998 789999999999999999999999988854 3468875554 6899999999 6887643 22334
Q ss_pred HHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhc
Q 038171 208 HTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHR 287 (509)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~ 287 (509)
.+....+.. +. ...+..++.+.+.+++.+.+++++++. ..|+++.|+++..++
T Consensus 162 ~~~~~~~~~-----------~~---------~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~~~~ 214 (398)
T 4fb2_A 162 RRWVWAITH-----------VE---------NPEEGAEIFAELVAHARTLIAERRTNP-------GNDIMSRVIMSKIDG 214 (398)
T ss_dssp HHHHHHHHH-----------CC---------CHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCBTT
T ss_pred HHHHHHHhc-----------CC---------CHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHcccCC
Confidence 333333322 10 112455667788888888888876532 179999999865432
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhh
Q 038171 288 GFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKET 367 (509)
Q Consensus 288 ~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~Et 367 (509)
..++++++..++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+
T Consensus 215 ---~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E~ 272 (398)
T 4fb2_A 215 ---ESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-------------------LIPNAVDEL 272 (398)
T ss_dssp ---BCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HHHHHHHHH
Confidence 3599999999999999999999999999999999999999999999863 689999999
Q ss_pred hccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCC
Q 038171 368 MRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRI 447 (509)
Q Consensus 368 lRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~ 447 (509)
||++|+++ ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+|| ...++|||+|+|.
T Consensus 273 lRl~p~~~--~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~r~ 340 (398)
T 4fb2_A 273 LRFYGPAM--VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERT----------PNRHLSLGHGIHR 340 (398)
T ss_dssp HHHHCCBC--EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCC----------SCCCCTTCCSTTC
T ss_pred HHhCCCcC--CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCC----------CCCCCCCCCCCcC
Confidence 99999999 67999999999999999999999999999999999999999999998 2358999999999
Q ss_pred CCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecccC
Q 038171 448 CPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEYV 508 (509)
Q Consensus 448 C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (509)
|+|++||.+|++++++.|+++| ++++.++.. +.. ..+.+..++ .+.|++++|..+
T Consensus 341 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~---~~~--~~~~~~~~~-~lpv~~~~~~~~ 396 (398)
T 4fb2_A 341 CLGAHLIRVEARVAITEFLKRIPEFSLDPNKE---CEW--LMGQVAGML-HVPIIFPKGKRL 396 (398)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHCCSCEECTTSC---CEE--ECSSBCEEE-ECEEECCCCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCcEECCCCC---cee--ccccccccc-eeEEEEcCCCCC
Confidence 9999999999999999999999 999887632 112 224444454 699999998765
No 45
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=3.1e-62 Score=468.49 Aligned_cols=396 Identities=16% Similarity=0.165 Sum_probs=308.9
Q ss_pred cCCCCCCCCCCCCCccc--ccccCC----CCCCCchhHHHHHhhhC--CeEEEeecCccEEEecCHHHHHHHHHhCCccc
Q 038171 27 SSYASSLPPGPKGLPFI--GNLHQF----DSSKPHVSFWELSKKYG--PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQF 98 (509)
Q Consensus 27 ~~~~~~~ppgp~~~p~~--G~~~~~----~~~~~~~~~~~~~~kyG--~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~ 98 (509)
...+.++||||.+.|.. +.+-.+ +..+++..+.+|+ +|| ||++++..| +.++|+||+.+++++.+. ..|
T Consensus 6 ~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~~-~~f 82 (415)
T 2zwu_A 6 IQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYEDY-RHF 82 (415)
T ss_dssp -----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHCT-TTE
T ss_pred ccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcCc-ccc
Confidence 35667899999999875 433211 1346778888885 799 999998333 699999999999999753 456
Q ss_pred cCCC-chhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH
Q 038171 99 SGRP-ASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT 177 (509)
Q Consensus 99 ~~~~-~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~ 177 (509)
..++ ...... ... +.+.++..+|+.|+++||. +.+.|++..++.+.+.+.++++++++.+.. ++++|+...+
T Consensus 83 ~~~~~~~~~~~-~~~-~~~~l~~~~g~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~ 155 (415)
T 2zwu_A 83 SSECPFIPREA-GEA-YDFIPTSMDPPEQRQFRAL-ANQVVGMPVVDKLENRIQELACSLIESLRP----QGQCNFTEDY 155 (415)
T ss_dssp ETTSCSSSHHH-HHH-CCCTTTTCCTTTTHHHHHH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHGG----GTEEEHHHHT
T ss_pred CCCcccCCCCc-ccc-ccccCccCCCcHHHHHHHH-HHhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCccHHHHH
Confidence 6665 111111 111 2331445579999999998 789999999999999999999999999864 2379999865
Q ss_pred -HHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 038171 178 -MSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQE 256 (509)
Q Consensus 178 -~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (509)
..+++++++.+ ||.+.+. .+.+.+....+... ..|. +..++.+.+.+++.+
T Consensus 156 ~~~~~~~vi~~~-~G~~~~~-------~~~~~~~~~~~~~~--------~~P~------------~~~~~~~~~~~~~~~ 207 (415)
T 2zwu_A 156 AEPFPIRIFMLL-AGLPEED-------IPHLKYLTDQMTRP--------DGSM------------TFAEAKEALYDYLIP 207 (415)
T ss_dssp TTHHHHHHHHHH-HTCCGGG-------HHHHHHHHHHHHSC--------CSSS------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCCHHH-------HHHHHHHHHHHHhc--------cCHH------------HHHHHHHHHHHHHHH
Confidence 78999999999 9987642 23344433332211 1121 234556677788888
Q ss_pred HHHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHH
Q 038171 257 LIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQE 336 (509)
Q Consensus 257 ~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~ 336 (509)
.+++++++. ..|+++.|+++..+ +..++++++..++..+++||+|||+++++|++++|++||++|+++++
T Consensus 208 ~i~~r~~~~-------~~dll~~ll~~~~~---~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~ 277 (415)
T 2zwu_A 208 IIEQRRQKP-------GTDAISIVANGQVN---GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIE 277 (415)
T ss_dssp HHHHHHHSC-------CSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHhCC-------CCCHHHHHHHhhhc---CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHh
Confidence 888876531 17899999976332 23589999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCC
Q 038171 337 EIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENP 416 (509)
Q Consensus 337 Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp 416 (509)
|++ |++|||+|+||++|+++. + |.+.+|++++||.||||+.|+++.+++||||++|+||
T Consensus 278 E~~-------------------~l~a~i~E~lRl~p~~~~-~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP 336 (415)
T 2zwu_A 278 RPE-------------------RIPAACEELLRRFSLVAD-G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACP 336 (415)
T ss_dssp CGG-------------------GHHHHHHHHHHHTCCBCC-E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSST
T ss_pred CHH-------------------HHHHHHHHHHhhcCCcCC-c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCc
Confidence 852 899999999999999995 7 9999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcce-eeCCCCCCCCcCCCCCCCCceeeec
Q 038171 417 EEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKFD-WEMPPGMKKQDLDFDSLSGITVHKK 495 (509)
Q Consensus 417 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (509)
++||||||- ..++|||+|+|.|+|++||.+|++++++.||++|+ +++.++. +++ ..+.+..+.
T Consensus 337 ~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~---~~~~~~~~~ 400 (415)
T 2zwu_A 337 MHVDFSRQK----------VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGA---QIQ---HKSGIVSGV 400 (415)
T ss_dssp TSCCTTCSS----------CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTC---CCC---EECSSBCEE
T ss_pred cccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCc---ccc---cCCccccCc
Confidence 999999961 34799999999999999999999999999999998 9987531 221 234555667
Q ss_pred cceEEEEeeccc
Q 038171 496 NFLVLLAKYHEY 507 (509)
Q Consensus 496 ~~~~~~~~~~~~ 507 (509)
..+.|+++||..
T Consensus 401 ~~lpv~~~~r~~ 412 (415)
T 2zwu_A 401 QALPLVWDPATT 412 (415)
T ss_dssp SCCEEECCGGGC
T ss_pred ceeEEEEecCCC
Confidence 789999998853
No 46
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=3.3e-61 Score=463.23 Aligned_cols=381 Identities=19% Similarity=0.231 Sum_probs=296.8
Q ss_pred CCCCchhHHHHHhhhCCeEEEeec--CccEEEecCHHHHHHHHHhCCccccCCCch--------h-hhh-----ccccCC
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIG--FVPTLIVSSAKMAKETLKAHDLQFSGRPAS--------V-ATQ-----RLTYNG 114 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~--~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~--------~-~~~-----~~~~~~ 114 (509)
..+++.++.++++ ||||+++++| +.++++|+||+.+++++.++ .|..++.. . ... .....+
T Consensus 19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 3578888999864 9999999987 78899999999999999865 56665431 0 000 001112
Q ss_pred cceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCC
Q 038171 115 LDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKR 193 (509)
Q Consensus 115 ~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~ 193 (509)
.+ ++..+|+.|+++||. +.+.|++..++.+.+.+++.++++++.+.. . +++|+...+ ..+++++++.+ ||.+
T Consensus 96 ~~-l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~-g~~dl~~~~~~~~~~~vi~~~-~G~~ 168 (425)
T 2z3t_A 96 NW-LVFLDPPHHTELRSL-LTTEFSPSIVTGLRPRIAELASALLDRLRA---Q-RRPDLVEGFAAPLPILVISAL-LGIP 168 (425)
T ss_dssp TC-GGGCCHHHHHHHHHH-HHGGGSHHHHHHHHHHHHHHHHHHHHHHTT---S-SSCBHHHHTTTHHHHHHHHHH-HTCC
T ss_pred cc-cccCCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---c-CCccHHHHHHHHHHHHHHHHH-hCCC
Confidence 33 445579999999998 789999999999999999999999999864 2 389998755 78999999998 9986
Q ss_pred CCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCc
Q 038171 194 SDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQ 273 (509)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 273 (509)
.+ ..+.+......+...+ ..+|. . ....++..++.+.+.+++.+.+++++++. .
T Consensus 169 ~~-------~~~~~~~~~~~~~~~~------~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~ 222 (425)
T 2z3t_A 169 EE-------DHTWLRANAVALQEAS------TTRAR-D-----GRGYARAEAASQEFTRYFRREVDRRGGDD-------R 222 (425)
T ss_dssp GG-------GHHHHHHHHHHHHTTC------TTCCC---------HHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HH-------HHHHHHHHHHHHHhhc------cccCC-C-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------C
Confidence 54 1233444333332211 11121 0 01234556677788888888887766531 1
Q ss_pred chHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhh
Q 038171 274 EDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDD 353 (509)
Q Consensus 274 ~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~ 353 (509)
.|+++.|+++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus 223 ~dll~~ll~~~~~~---~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~--------------- 284 (425)
T 2z3t_A 223 DDLLTLLVRARDTG---SPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP--------------- 284 (425)
T ss_dssp -CHHHHHHHHHHTT---CCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG---------------
T ss_pred CCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh---------------
Confidence 79999999886543 369999999999999999999999999999999999999999999985
Q ss_pred hccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCC
Q 038171 354 VQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKG 433 (509)
Q Consensus 354 ~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~ 433 (509)
.|++|||+|+||++|++| .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||.
T Consensus 285 ----~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~-------- 351 (425)
T 2z3t_A 285 ----ESTPAAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA-------- 351 (425)
T ss_dssp ----GGHHHHHHHHHHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS--------
T ss_pred ----HhHHHHHHHHHHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC--------
Confidence 289999999999999999 5789999999999999999999999999999999999999999999995
Q ss_pred CCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 434 KNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 434 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
..++|||+|+|.|+|++||++|++++++.|+++| +++ .++.. + ....+.+.++...+.|++++.+
T Consensus 352 --~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~--~---~~~~~~~~~~~~~lpv~~~~~~ 417 (425)
T 2z3t_A 352 --ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHE--V---EYADDMVFHGPTRLLLDLPDAA 417 (425)
T ss_dssp --SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEE--E---EECSCSSBCCEEEEEECCC---
T ss_pred --CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCc--c---ccccccccCCcceeeEEecchh
Confidence 2479999999999999999999999999999999 899 65421 1 1224455667778888887754
No 47
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=6.9e-62 Score=469.87 Aligned_cols=387 Identities=18% Similarity=0.264 Sum_probs=294.2
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIR 130 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 130 (509)
..+++.++.++ ++||||+++..++ .++|++|+.+++++.++.. |..++....... ..+.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~--~~~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEP--VMRGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCC--SCC-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-cccccccccccc--ccCCCccccCCcHHHHHHH
Confidence 35778888776 5899999987655 8999999999999987644 665554322221 1233456677899999999
Q ss_pred HHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchH-HHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHH
Q 038171 131 KICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLS-EKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHT 209 (509)
Q Consensus 131 k~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (509)
|+ +.+.|++..++.+.+.+++.++++++.|.. ++++|+. +....+++++++. +||.+.. ..+.+..
T Consensus 126 r~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~-------~~~~~~~ 192 (441)
T 3nc3_A 126 RI-VVRSFIGDALDHLSPLIKQNAENLLAPYLE----RGKSDLVNDFGKTFAVCVTMD-MLGLDKR-------DHEKISE 192 (441)
T ss_dssp HH-HHHHHHHTHHHHHHHHHHHHHHHHHTTTTT----TTEEECCCCCHHHHHHHHHHH-HTTCCGG-------GHHHHHH
T ss_pred HH-HHhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHH-HcCCCHH-------HHHHHHH
Confidence 99 799999999999999999999999988753 4578874 4455699999998 5887653 2344444
Q ss_pred HHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCC
Q 038171 210 LLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGF 289 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 289 (509)
....+........ .+ ....+...++.+.+.+++.+.+++++++.. +|+++.|+++..++
T Consensus 193 ~~~~~~~~~~~~~----~~--------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~-------~Dll~~Ll~~~~~~-- 251 (441)
T 3nc3_A 193 WHSGVADFITSIS----QS--------PEARAHSLWCSEQLSQYLMPVIKERRVNPG-------SDLISILCTSEYEG-- 251 (441)
T ss_dssp HHHHHHHHHHCSC----CC--------HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-------SSHHHHHCC-------
T ss_pred HHHHHHHhccccc----CC--------hHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCHHHHHHHhhccC--
Confidence 4444443322111 01 112344566777888999999998865321 79999999876533
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhc
Q 038171 290 KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMR 369 (509)
Q Consensus 290 ~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR 369 (509)
..++++++.++++.+++||+|||+++++|++++|++||++|+++++|+ +|++|||+|+||
T Consensus 252 -~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~i~E~LR 311 (441)
T 3nc3_A 252 -MALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADR-------------------SLVPRAIAETLR 311 (441)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCG-------------------GGHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------------HHHHHHHHHhhh
Confidence 369999999999999999999999999999999999999999999874 699999999999
Q ss_pred cCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCC
Q 038171 370 LQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449 (509)
Q Consensus 370 l~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 449 (509)
++|+++. ++|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+||+.+..........++|||+|+|.|+
T Consensus 312 l~pp~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~ 390 (441)
T 3nc3_A 312 YKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCV 390 (441)
T ss_dssp HSCSBCE-EEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCT
T ss_pred cCCcccC-ccEEECCCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCC
Confidence 9999998 789999999999999999999999999999999999999999999998654332223567899999999999
Q ss_pred ChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171 450 GMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY 504 (509)
Q Consensus 450 G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (509)
|++||.+|++++++.|+++| ++++.++. .....+.+.+....+.|+++|
T Consensus 391 G~~lA~~e~~~~l~~ll~~f~~~~l~~~~------~~~~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 391 GTAFAKNEIEIVANIVLDKMRNIRLEEDF------CYAESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp THHHHHHHHHHHHHHHHHHSTTCEECTTC------CCCEECSSBCEESCCEEECC-
T ss_pred CHHHHHHHHHHHHHHHHHhCcccEECCCC------cccccCccccCcceeEEEEec
Confidence 99999999999999999999 89987652 123344556666788888765
No 48
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=1e-60 Score=459.59 Aligned_cols=353 Identities=18% Similarity=0.266 Sum_probs=292.7
Q ss_pred CCCCchhHHHHHhhhCCeEEEeec-CccEEEecCHHHHHHHHHhCCccccCCCchhhhhcccc------CCcceEecCCc
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIG-FVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTY------NGLDLIFSPYG 123 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~-~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g 123 (509)
..+++.++.+|+++ |||++++++ |.++++|+||+.+++++.++ .|..++.......... .+...++..+|
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 104 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA 104 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence 67899999999998 999999987 58999999999999999876 4554322111111110 12334566689
Q ss_pred hhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchh
Q 038171 124 EYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAIS 202 (509)
Q Consensus 124 ~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 202 (509)
+.|+++||. +.+.|+++.++.+.+.+++.++++++.+.. .++++|+...+ ..+++++++.+ ||.+.+..
T Consensus 105 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~----- 174 (417)
T 3tyw_A 105 PEHTRYRRM-LLPAFTVRRVRAMRPAVQARVDEILDGMLA---AGGPVDLVSAYANAVSTSVICEL-LGIPRHDL----- 174 (417)
T ss_dssp HHHHHHHHH-HGGGGCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTT-----
T ss_pred cHHHHHHHH-HHhhhCHHHHHHHHHHHHHHHHHHHHHHHh---hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHH-----
Confidence 999999998 789999999999999999999999999976 46689999988 58899999997 99877632
Q ss_pred hhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHH
Q 038171 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQ 282 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~ 282 (509)
+.+......+... .+ ..++..++.+.+.+++.+.+++++++.. .|+++.|++
T Consensus 175 --~~~~~~~~~~~~~---------~~----------~~~~~~~~~~~l~~~~~~~i~~r~~~~~-------~d~l~~ll~ 226 (417)
T 3tyw_A 175 --EFFRDVTRISGSR---------NS----------TAEQVSEALGGLFGLLGGLVAERREEPR-------DDLISKLVT 226 (417)
T ss_dssp --THHHHHHHHHHSS---------SS----------CTTHHHHHHHHHHHHHHHHHHHHHSSCC-------SSHHHHHHH
T ss_pred --HHHHHHHHHHhcc---------cC----------CHHHHHHHHHHHHHHHHHHHHHHhhCCC-------CCHHHHHHH
Confidence 2333332222110 01 1123556667788888999988776421 799999998
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHH
Q 038171 283 IRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362 (509)
Q Consensus 283 ~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a 362 (509)
...++ ..++++++..++..+++||+|||+++++|++++|++||++|++|++|+ .|++|
T Consensus 227 ~~~~~---~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a 284 (417)
T 3tyw_A 227 DHLVP---GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDP-------------------DLMPA 284 (417)
T ss_dssp HTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCG-------------------GGHHH
T ss_pred hcccC---CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh-------------------HHHHH
Confidence 76554 369999999999999999999999999999999999999999999984 37999
Q ss_pred HHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeeccc
Q 038171 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFG 442 (509)
Q Consensus 363 ~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg 442 (509)
||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+||. ..++|||
T Consensus 285 ~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG 354 (417)
T 3tyw_A 285 AVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTD----------NHHVAFG 354 (417)
T ss_dssp HHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTC
T ss_pred HHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCC----------CCCCCCC
Confidence 999999999999987789999999999999999999999999999999999999999999992 3589999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCC
Q 038171 443 AGRRICPGMHLGIATVDLALANLLYKF-DWEMPPG 476 (509)
Q Consensus 443 ~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~ 476 (509)
+|+|.|+|++||.+|++++++.|+++| ++++..+
T Consensus 355 ~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~ 389 (417)
T 3tyw_A 355 YGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE 389 (417)
T ss_dssp CSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred CCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence 999999999999999999999999999 9998754
No 49
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=2.8e-61 Score=463.57 Aligned_cols=382 Identities=16% Similarity=0.234 Sum_probs=305.4
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc-----hhhh-hccccCC--cceEecCC
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA-----SVAT-QRLTYNG--LDLIFSPY 122 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~-----~~~~-~~~~~~~--~~~~~~~~ 122 (509)
..+++..+.++ ++||||++ + ++.++++|+||+.+++++.++. |..++. .... ......+ ...++..+
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP 99 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC
Confidence 56889999999 68999999 6 7789999999999999998764 776652 1101 0001110 22345568
Q ss_pred chhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHH-HHHhHHHHHHHHHhcCCCCCCccch
Q 038171 123 GEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEK-TMSLSCNTICRLAFGKRSDGNEEAI 201 (509)
Q Consensus 123 g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~ 201 (509)
|+.|+++||. +.+.|++..++.+.+.++++++++++.+.. ++++|+... ...+++++|+.+ ||.+.+
T Consensus 100 g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~------ 167 (419)
T 1q5d_A 100 PEDHARVRKL-VNPSFTSRAIDLLRAEIQRTVDQLLDARSG----QEEFDVVRDYAEGIPMRAISAL-LKVPAE------ 167 (419)
T ss_dssp HHHHHHHHHH-HGGGGSHHHHGGGHHHHHHHHHHHHHHHTT----SSCEETTTTTGGGSHHHHHHHH-TTCCGG------
T ss_pred chHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH-hCCCHH------
Confidence 9999999998 789999999999999999999999999864 248998865 489999999998 998654
Q ss_pred hhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcc-hHHHHH
Q 038171 202 SGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQE-DLVDVL 280 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-d~l~~l 280 (509)
..+.+......+..... ...+|+.. ...++..++...+.+++.+.+++++++. .+ |+++.|
T Consensus 168 -~~~~~~~~~~~~~~~~~----~~~~P~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~~dll~~l 229 (419)
T 1q5d_A 168 -CDEKFRRFGSATARALG----VGLVPRVD------EETKTLVASVTEGLALLHGVLDERRRNP-------LENDVLTML 229 (419)
T ss_dssp -GHHHHHHHHHHHHHHTT----TTTSSCCC------SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSCHHHHH
T ss_pred -HHHHHHHHHHHHHHhcc----cccccCCh------HHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCCHHHHH
Confidence 22344444444433221 11233221 1224556677788888999998876531 15 999999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhH
Q 038171 281 LQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYL 360 (509)
Q Consensus 281 l~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l 360 (509)
+++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+ .|+
T Consensus 230 l~~~~~~---~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l 287 (419)
T 1q5d_A 230 LQAEADG---SRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP-------------------GLM 287 (419)
T ss_dssp HHHHHSS---TTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------GGH
T ss_pred HhhhccC---CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------------------HHH
Confidence 9886532 369999999999999999999999999999999999999999999983 389
Q ss_pred HHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeec
Q 038171 361 KAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIP 440 (509)
Q Consensus 361 ~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~ 440 (509)
+|||+|+||++|++|..++|.+.+|++++||.||+|+.|+++.+++||||++|+||++||||||- ..++|
T Consensus 288 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~ 357 (419)
T 1q5d_A 288 RNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT----------SASLA 357 (419)
T ss_dssp HHHHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTCCT
T ss_pred HHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCC----------CCCCC
Confidence 99999999999999966889999999999999999999999999999999999999999999941 34799
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 441 FGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 441 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
||+|+|.|+|++||++|++++++.|+++| ++++.++. ++ ..+.+..+..++.|++++|.
T Consensus 358 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~----~~~~~~~~~~~l~v~~~~r~ 417 (419)
T 1q5d_A 358 YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETP---VF----GYHPAFRNIESLNVILKPSK 417 (419)
T ss_dssp TCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCC---EE----CCCSSBCCEEECEEESSCC-
T ss_pred CCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCc---cc----ccccccCCCceeEEEEecCC
Confidence 99999999999999999999999999999 79987641 21 23456667779999999885
No 50
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=5.6e-62 Score=466.85 Aligned_cols=380 Identities=21% Similarity=0.271 Sum_probs=302.6
Q ss_pred CCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCC-chhhhh--cccc-------CC-cceE
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRP-ASVATQ--RLTY-------NG-LDLI 118 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~-~~~~~~--~~~~-------~~-~~~~ 118 (509)
..+++..+.++ ++||||+++++ |+.++++|+||+.+++++.++. +..++ ...... .... .+ .+.+
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccccc
Confidence 56788999999 99999999997 8899999999999999998653 23332 111100 0000 01 2345
Q ss_pred ecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH-HhHHHHHHHHHhcCCCCCC
Q 038171 119 FSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM-SLSCNTICRLAFGKRSDGN 197 (509)
Q Consensus 119 ~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~ 197 (509)
+..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.. .++++|+...+. .+++++++. +||.+.+
T Consensus 93 ~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~-- 165 (411)
T 1gwi_A 93 LTVDGAEHRRLRTL-VAQALTVRRVEHMRGRITELTDRLLDELPA---DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA-- 165 (411)
T ss_dssp GGCCHHHHHHHHHH-HTTTSCHHHHHTTHHHHHHHHHHHHHTSCC---SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG--
T ss_pred ccCCcHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHH---cCCCcchHHHHhhHHHHHHHHH-HhCCCHH--
Confidence 66689999999998 789999999999999999999999998852 367899998886 599999996 6998653
Q ss_pred ccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHH
Q 038171 198 EEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLV 277 (509)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l 277 (509)
..+.+......+... . .+ .++..++.+.+.+++.+++++++++. ..|++
T Consensus 166 -----~~~~~~~~~~~~~~~----~----~~-----------~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l 214 (411)
T 1gwi_A 166 -----RLPRLKVLFEKFFST----Q----TP-----------PEEVVATLTELASIMTDTVAAKRAAP-------GDDLT 214 (411)
T ss_dssp -----GHHHHHHHHHHHHCT----T----SC-----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHH
T ss_pred -----HHHHHHHHHHHHhcc----C----CC-----------hHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHH
Confidence 223343333322210 0 00 12345566778888888888776431 17899
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccc
Q 038171 278 DVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQEL 357 (509)
Q Consensus 278 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~l 357 (509)
+.|+++..+ +..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 215 ~~ll~~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------- 272 (411)
T 1gwi_A 215 SALIQASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------- 272 (411)
T ss_dssp HHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS-------------------
T ss_pred HHHHHhccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh-------------------
Confidence 999976432 2369999999999999999999999999999999999999999999862
Q ss_pred hhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCC-CCCCCCCCCcCCCCCCCCCCCCc
Q 038171 358 HYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERFIDRSVDFKGKNF 436 (509)
Q Consensus 358 p~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~ 436 (509)
+|++|||+|+||++|++|..++|.+.+|++++||.||||+.|+++.+++||||++| +||++||||||.+ .
T Consensus 273 ~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~ 343 (411)
T 1gwi_A 273 AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------N 343 (411)
T ss_dssp SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------S
T ss_pred HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------C
Confidence 36999999999999999976789999999999999999999999999999999999 9999999999942 3
Q ss_pred eeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 437 EFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 437 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
.++|||+|+|.|+|++||++|++++++.|+++| ++++..+. .+ +....+.+.++...+.|++++|+
T Consensus 344 ~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~--~~~~~~~~~~~~~~lpv~~~~r~ 410 (411)
T 1gwi_A 344 RHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPA--AE--LRNKPVVTQNDLFELPVRLAHHH 410 (411)
T ss_dssp CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCBCSCTTBCCBSCCEEESSCC-
T ss_pred CcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCc--cc--ccccccccccCcceeEEEecCCC
Confidence 589999999999999999999999999999999 79886432 22 22334456677889999999885
No 51
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=4.4e-61 Score=460.79 Aligned_cols=374 Identities=19% Similarity=0.290 Sum_probs=294.9
Q ss_pred CCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCch-hhhhccc--cCCcceEecCCchhH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPAS-VATQRLT--YNGLDLIFSPYGEYW 126 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~g~~w 126 (509)
..+++..+.+| ++||||+++++ |+.+.++|+||+.+++++.++ .|..++.. ..+.... ..+. .++..+|+.|
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~-~l~~~dg~~h 111 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKG-GLLSMDPPEH 111 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCC-SGGGCCTTHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccc-cCccCCchHH
Confidence 56889999999 89999999997 889999999999999999864 24444322 1111111 1223 3456689999
Q ss_pred HHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH-HhHHHHHHHHHhcCCCCCCccchhhhh
Q 038171 127 REIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM-SLSCNTICRLAFGKRSDGNEEAISGRS 205 (509)
Q Consensus 127 ~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (509)
+++||. +.+.|++..++.+.+.+.++++++++.+.. ++.++|+...+. .+++++++. +||.+.+ ..+
T Consensus 112 ~~~R~~-l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~-------~~~ 179 (417)
T 2y5n_A 112 SRLRRL-VVKAFTARRAESLRPRAREIAHELVDQMAA---TGQPADLVAMFARQLPVRVICE-LLGVPSA-------DHD 179 (417)
T ss_dssp HHHHHH-HHHHSCHHHHHHTHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG-------GHH
T ss_pred HHHHHH-HhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeHHHHHHHHhHHHHHHH-HcCCCHH-------HHH
Confidence 999998 788999999999999999999999999974 223899997764 699999998 6998653 122
Q ss_pred HHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHH
Q 038171 206 RFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRK 285 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (509)
.+......+ ... .. .| .++..++.+.+.+++.+.+++++++. .+|+++.|+++..
T Consensus 180 ~~~~~~~~~----~~~--~~-~~-----------~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~dll~~ll~~~~ 234 (417)
T 2y5n_A 180 RFTRWSGAF----LST--AE-VT-----------AEEMQEAAEQAYAYMGDLIDRRRKEP-------TDDLVSALVQARD 234 (417)
T ss_dssp HHHHHHHTT----STT--CC-CC-----------HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCB
T ss_pred HHHHHHHHH----hcc--cC-CC-----------HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhhc
Confidence 332222211 110 00 11 13455667778888888888876532 1789999998643
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHH
Q 038171 286 HRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVK 365 (509)
Q Consensus 286 ~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~ 365 (509)
+ +..++++++.++++.+++||+|||+++++|++++|++||++|+++++|+ .|++|||+
T Consensus 235 ~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~i~ 292 (417)
T 2y5n_A 235 Q---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP-------------------ELIPSAVE 292 (417)
T ss_dssp T---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------GGHHHHHH
T ss_pred c---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-------------------HHHHHHHH
Confidence 2 2369999999999999999999999999999999999999999999984 37999999
Q ss_pred hhhccCCCCc-ccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCC
Q 038171 366 ETMRLQPPAP-LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAG 444 (509)
Q Consensus 366 EtlRl~p~~~-~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G 444 (509)
|+||++|++| ..++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||. ..++|||+|
T Consensus 293 E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G 362 (417)
T 2y5n_A 293 ELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTP----------NQHLGFGHG 362 (417)
T ss_dssp HHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCS
T ss_pred HHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCC----------CCcCCCCCC
Confidence 9999999999 55789999999999999999999999999999999999999999999982 347999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEE
Q 038171 445 RRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL 501 (509)
Q Consensus 445 ~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (509)
+|.|+|++||++|++++++.|+++| ++++.++. .++ ....+.+.+....+.|+
T Consensus 363 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~~--~~~~~~~~~~~~~lpv~ 416 (417)
T 2y5n_A 363 VHHCLGAPLARVELQVALEVLLQRLPGIRLGIPE--TQL--RWSEGMLLRGPLELPVV 416 (417)
T ss_dssp TTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GGC--CBCCCSSBCCBSCCEEE
T ss_pred CcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCC--ccc--eeccCcccCCcceeEEe
Confidence 9999999999999999999999999 58886542 122 22334444555566654
No 52
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=5.6e-61 Score=458.69 Aligned_cols=376 Identities=17% Similarity=0.227 Sum_probs=298.8
Q ss_pred CCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh------ccc-cCCcceEecCCch
Q 038171 52 SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ------RLT-YNGLDLIFSPYGE 124 (509)
Q Consensus 52 ~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~g~ 124 (509)
.+++.++.++ ++||||++ + |.+.++|+||+.+++++.++ .|..++...... ... ..+. .++..+|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGD-IILFQDEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTT-CGGGCCTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCccccccccccccccccccccc-ccccCCch
Confidence 4678888776 58999999 6 58899999999999999863 454433211110 010 0023 34556799
Q ss_pred hHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHH-HHHhHHHHHHHHHhcCCCCCCccchhh
Q 038171 125 YWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEK-TMSLSCNTICRLAFGKRSDGNEEAISG 203 (509)
Q Consensus 125 ~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~ 203 (509)
.|+++||. +.+.|++..++.+.+.++++++++++.+.. ++++|+... ...+++++++.+ ||.+.+.
T Consensus 86 ~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~------- 152 (397)
T 3buj_A 86 DHGRLRGV-VGPAFSPSALRRLEPVIAGTVDDLLRPALA----RGAMDVVDELAYPLALRAVLGL-LGLPAAD------- 152 (397)
T ss_dssp HHHHHHHH-HGGGSSTTTTGGGHHHHHHHHHHHHHHHHT----TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG-------
T ss_pred hHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHhHHHHHHHH-hCCCHHH-------
Confidence 99999998 788999999999999999999999999873 358998755 578999999998 9987542
Q ss_pred hhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHH
Q 038171 204 RSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQI 283 (509)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~ 283 (509)
.+.+......+...+. . .+| ....++..++.+.+.+++.+.+++++++. .+|+++.|+++
T Consensus 153 ~~~~~~~~~~~~~~~~---~--~~~--------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~ 212 (397)
T 3buj_A 153 WGAVGRWSRDVGRTLD---R--GAS--------AEDMRRGHAAIAEFADYVERALARRRREG-------GEDLLALMLDA 212 (397)
T ss_dssp HHHHHHHHHHHHGGGC---S--SCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcC---C--CCC--------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCCHHHHHHHh
Confidence 2334433333322111 0 011 12234556677788888999988876542 17999999987
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHH
Q 038171 284 RKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAV 363 (509)
Q Consensus 284 ~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~ 363 (509)
..++ . ++++++.+++..+++||+|||+++++|++++|++||++|+++++|+ .|++||
T Consensus 213 ~~~~---~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~ 269 (397)
T 3buj_A 213 HDRG---L-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP-------------------DLLAQA 269 (397)
T ss_dssp HHTT---S-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG-------------------GGHHHH
T ss_pred hhcC---C-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH-------------------HHHHHH
Confidence 6432 2 9999999999999999999999999999999999999999999984 289999
Q ss_pred HHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccC
Q 038171 364 VKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGA 443 (509)
Q Consensus 364 i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~ 443 (509)
|+|+||++|++| .++|.+.+|++++||.||+|+.|+++.+++||||++|+||++|||+||. ..++|||+
T Consensus 270 i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~ 338 (397)
T 3buj_A 270 VEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGA 338 (397)
T ss_dssp HHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCC
T ss_pred HHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCC----------CCCCCCCC
Confidence 999999999999 5789999999999999999999999999999999999999999999994 24799999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 444 GRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 444 G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
|+|.|+|++||++|++++++.| ++| ++++.++. .+ +....+.+.++..++.|+++||.
T Consensus 339 G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~--~~--~~~~~~~~~~~~~~l~v~~~~rg 397 (397)
T 3buj_A 339 GMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCAS--DA--LAYQPRTMFRGLASLPIAFTPGG 397 (397)
T ss_dssp GGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCS--TT--CCBCSCSSCCCBSCCEEECCTTC
T ss_pred CCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCC--cc--cccccccccCCCcceeEEecCCC
Confidence 9999999999999999999999 999 89987652 12 22334566778889999999884
No 53
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=1.3e-60 Score=457.22 Aligned_cols=367 Identities=19% Similarity=0.257 Sum_probs=291.8
Q ss_pred CCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCchhhhh--
Q 038171 32 SLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ-- 108 (509)
Q Consensus 32 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~-- 108 (509)
...+||.. |+- ..+ ..+++.++.+|+ +||||+++++ |+.++++|+||+.+++++.++ .|..++......
T Consensus 7 ~~~~g~~~-~~~---~~~-~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 78 (413)
T 2z36_A 7 DELAGLEL-PVE---RGC-PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLF 78 (413)
T ss_dssp ---CCCEE-CCC---CCB-TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCS
T ss_pred HHhccccC-CCC---ccc-ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccc
Confidence 34456652 432 233 568899999997 7899999997 889999999999999999864 455554221111
Q ss_pred --c-ccc----CCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHH-Hh
Q 038171 109 --R-LTY----NGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTM-SL 180 (509)
Q Consensus 109 --~-~~~----~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~-~~ 180 (509)
. ... .+.+.++..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.+ .+++++|+...+. .+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~--~~~~~~d~~~~~~~~~ 155 (413)
T 2z36_A 79 TLDAATLQQLRSQPPLMLGMDGAEHSAARRP-VIGEFTVKRLAALRPRIQDIVDHFIDDMLA--TDQRPVDLVQALSLPV 155 (413)
T ss_dssp SCCHHHHHHHTTSCCCGGGCCHHHHHHHHHH-HHGGGSHHHHHHHHHHHHHHHHHHHHHHTT--CSCSSEEHHHHTTTHH
T ss_pred ccccccccccccccccccccCchHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHH--hcCCCccHHHHHhhhh
Confidence 0 011 23441455689999999998 788999999999999999999999999864 1266899987665 69
Q ss_pred HHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 038171 181 SCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDE 260 (509)
Q Consensus 181 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (509)
++++++.+ ||.+.+. .+.+...... .+. . ..| ++..++.+.+.+++.+++++
T Consensus 156 ~~~vi~~~-~G~~~~~-------~~~~~~~~~~---~~~---~--~~~------------~~~~~~~~~~~~~~~~~i~~ 207 (413)
T 2z36_A 156 PSLVICEL-LGVPYTD-------HDFFQSRTTM---MVS---R--TSM------------EDRRRAFAELRAYIDDLITR 207 (413)
T ss_dssp HHHHHHHH-HTCCGGG-------HHHHHHHHHH---TTC---S--SCH------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCCHHH-------HHHHHHHHHH---Hhc---c--cCc------------HHHHHHHHHHHHHHHHHHHH
Confidence 99999995 9986531 2223222211 100 0 001 34556677788888999988
Q ss_pred hcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHH
Q 038171 261 HLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRS 340 (509)
Q Consensus 261 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~ 340 (509)
++++. .+|+++.|+++..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus 208 r~~~~-------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-- 275 (413)
T 2z36_A 208 KESEP-------GDDLFSRQIARQRQE---GTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP-- 275 (413)
T ss_dssp HHSSC-------CSSHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG--
T ss_pred HHhCC-------CCCHHHHHHHhhcCC---CCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh--
Confidence 77642 178999999876443 369999999999999999999999999999999999999999999984
Q ss_pred hhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCC
Q 038171 341 LVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFN 420 (509)
Q Consensus 341 ~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~ 420 (509)
.|++|||+|+||++|++|..++|.+.+|++++||.||+|+.|+++.+++||||++|+||++||
T Consensus 276 -----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~ 338 (413)
T 2z36_A 276 -----------------GRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLD 338 (413)
T ss_dssp -----------------GGHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCC
T ss_pred -----------------HHHHHHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccC
Confidence 379999999999999999668899999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCC
Q 038171 421 PERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPG 476 (509)
Q Consensus 421 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~ 476 (509)
||||. ..++|||+|+|.|+|++||++|++++++.||++| ++++.++
T Consensus 339 PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 385 (413)
T 2z36_A 339 VERGA----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVP 385 (413)
T ss_dssp TTCCC----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSC
T ss_pred CCCCC----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 99983 2479999999999999999999999999999999 5887654
No 54
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.8e-61 Score=458.75 Aligned_cols=379 Identities=15% Similarity=0.184 Sum_probs=301.4
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIR 130 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 130 (509)
..+++.++.++++ ||||+++. .++++|+||+.+++++.++. .|..++... ... ..+ +.++..+|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~--~~~-~~l~~~~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQ--PAL-PMMIDMDDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTS--CCC-SSGGGCCTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Ccc--ccc-ccccccCchHHHHHH
Confidence 4578889999987 99999765 37999999999999998653 566655322 111 122 345556799999999
Q ss_pred HHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHH-HHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHH
Q 038171 131 KICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSE-KTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHT 209 (509)
Q Consensus 131 k~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~-~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (509)
|. +.+.|++..++.+.+.+++.++++++.+.+ ++++|+.. +...+++++|+.+ ||.+.+. .+.+..
T Consensus 88 ~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-------~~~~~~ 154 (398)
T 2xkr_A 88 KL-VNAGFTRKRVKDKEASIAALCDTLIDAVCE----RGECDFVRDLAAPLPMAVIGDM-LGVRPEQ-------RDMFLR 154 (398)
T ss_dssp HH-HGGGSCHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG-------HHHHHH
T ss_pred HH-hhhhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCccHHHHHHHHHHHHHHHHH-hCCCHHH-------HHHHHH
Confidence 98 689999999999999999999999998854 34799994 4568999999998 9987542 234444
Q ss_pred HHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCC
Q 038171 210 LLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGF 289 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 289 (509)
....+..... ..+.| ...++..++.+.+.+++.+++++++++. ..|+++.|+++..+
T Consensus 155 ~~~~~~~~~~----~~~~p---------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~~--- 211 (398)
T 2xkr_A 155 WSDDLVTFLS----SHVSQ---------EDFQITMDAFAAYNDFTRATIAARRADP-------TDDLVSVLVSSEVD--- 211 (398)
T ss_dssp HHHHHHHHHT----SCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCCBT---
T ss_pred HHHHHHhccC----cccch---------hhHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhhcc---
Confidence 4443332211 11112 2234556677788888999988876531 17899999976432
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhc
Q 038171 290 KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMR 369 (509)
Q Consensus 290 ~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR 369 (509)
+..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+||
T Consensus 212 ~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E~lR 272 (398)
T 2xkr_A 212 GERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS-------------------LLPGAIEEMLR 272 (398)
T ss_dssp TBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-------------------GHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHHHHHHHHh
Confidence 23699999999999999999999999999999999999999999999863 89999999999
Q ss_pred cCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCC
Q 038171 370 LQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449 (509)
Q Consensus 370 l~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 449 (509)
++|++|. ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+||.. .++|||+|+|.|+
T Consensus 273 l~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~ 341 (398)
T 2xkr_A 273 WTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPN----------SHLAFGFGTHFCL 341 (398)
T ss_dssp HHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSC----------CCCTTCCSTTCCT
T ss_pred hcccccC-cceEECCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCC----------CCCcCCCCCcCCc
Confidence 9999997 7899999999999999999999999999999999999999999999841 3799999999999
Q ss_pred ChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecccC
Q 038171 450 GMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEYV 508 (509)
Q Consensus 450 G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (509)
|++||++|++++++.|+++| ++++..+ .+++ ....+........+.|+++||.+.
T Consensus 342 G~~lA~~e~~~~l~~ll~~f~~~~~~~~---~~~~-~~~~~~~~~~~~~lpv~~~p~~r~ 397 (398)
T 2xkr_A 342 GNQLARLELSLMTERVLRRLPDLRLVAD---DSVL-PLRPANFVSGLESMPVVFTPSPPL 397 (398)
T ss_dssp THHHHHHHHHHHHHHHHHHSTTCEESCT---TCCC-CBCCCSSBCCBSCCEEECCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceECCC---ccee-cccCcccccCccceeEEecCCCCC
Confidence 99999999999999999999 5998632 1221 002334445566888888888764
No 55
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=2.6e-61 Score=473.93 Aligned_cols=409 Identities=14% Similarity=0.210 Sum_probs=295.7
Q ss_pred CCCCCCCCCCCCcccccccCCC----CC-CCchhHHHHHhhhCC-eEEEeecCc-------cEEEecCHHHHHHHHHh--
Q 038171 29 YASSLPPGPKGLPFIGNLHQFD----SS-KPHVSFWELSKKYGP-LMSLRIGFV-------PTLIVSSAKMAKETLKA-- 93 (509)
Q Consensus 29 ~~~~~ppgp~~~p~~G~~~~~~----~~-~~~~~~~~~~~kyG~-v~~i~~~~~-------~~vvv~dp~~~~~i~~~-- 93 (509)
.+.+.+|||+++|++|+++.+. .. +++.++.++++|||+ ||++++++. ..|++.|.+..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 4567789999999999998752 44 788899999999999 999998744 34445555544444431
Q ss_pred --CCccccCCCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCcc
Q 038171 94 --HDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQV 171 (509)
Q Consensus 94 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v 171 (509)
+...+...... ............++..+|+.|+++|+. +.+.|+++ ++.+.+.+++.++++++.|.....+++++
T Consensus 86 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~h~~~R~~-~~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 162 (473)
T 3dan_A 86 VEKKDLFTGTYMP-STKLTGGYRVLSYLDPSEPRHAQLKNL-LFFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKA 162 (473)
T ss_dssp EECSSCTTSSSCC-CGGGGTTSCCGGGCCTTSHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred eeccccccccccC-CccccCCCcceeeeCCCcHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 11111111100 011111111334556689999999998 68899985 89999999999999999998655556799
Q ss_pred chHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHH
Q 038171 172 NLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESD 251 (509)
Q Consensus 172 d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~ 251 (509)
|+.+++..+++++++.++||.+.+..+ ..+.+......+........+...+| .
T Consensus 163 dl~~~~~~~~~~~i~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~lp--~-------------------- 216 (473)
T 3dan_A 163 AFNDVGEQAAFRFLGRAYFNSNPEETK----LGTSAPTLISSWVLFNLAPTLDLGLP--W-------------------- 216 (473)
T ss_dssp ECHHHHHHHHHHHHHHHHHSCCGGGST----TTTCHHHHHHHHHHHHHGGGCCCSCC--H--------------------
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCCchh----hhhhHHHHHHHHHHHhccchhhhcch--H--------------------
Confidence 999999999999999999999876521 22233333332221100000011122 1
Q ss_pred HHHHHHHHhhcCcccc-----ccc--cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH-HhcCCchHhHHHHHHHH
Q 038171 252 RFYQELIDEHLDPKRT-----KAD--MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIF-VAGTDTSAATLVWTMTY 323 (509)
Q Consensus 252 ~~~~~~i~~~~~~~~~-----~~~--~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~-~ag~~tta~~l~~~l~~ 323 (509)
++...+.++...... ..+ ..-.|+++.+++..++. .++++++..+++.++ ++|++||+++++|++++
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~----~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~ 291 (473)
T 3dan_A 217 -FLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVATPVMEQAEKL----GVPKDEAVHNILFAVCFNTFGGVKILFPNTLKW 291 (473)
T ss_dssp -HHHHHHHSSSCCCGGGTHHHHHHHHHHHHHHCHHHHHHHHHH----TCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHhhhccchHhhhhhchhhhHHHHHHHHHHHHHhHhhc----CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 111111111100000 000 00034555566655443 699999998886666 78888899999999999
Q ss_pred Hhh-ChHHHHHHHHHHHHhhCC-CCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccc----cCceeCCCC
Q 038171 324 LMK-HPRVMKKVQEEIRSLVGG-NKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSII----DGYEIPAKT 397 (509)
Q Consensus 324 L~~-~p~~q~~l~~Ei~~~~~~-~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~----~g~~ip~g~ 397 (509)
|++ ||++|++|++|++++++. .++.++++++++||||+|||+|+||++|+++... |.+.+|+++ +||.||||+
T Consensus 292 L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~ 370 (473)
T 3dan_A 292 IGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGE 370 (473)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTC
T ss_pred HHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCC
Confidence 999 799999999999999876 5567999999999999999999999999999866 558999999 999999999
Q ss_pred EEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCC---------CCCCChhHHHHHHHHHHHHhHhc
Q 038171 398 LVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGR---------RICPGMHLGIATVDLALANLLYK 468 (509)
Q Consensus 398 ~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~---------r~C~G~~~a~~~~~~~l~~ll~~ 468 (509)
.|.++.+++||||++|+||++|||+||++.+. ....+++||.|+ |.|+|++||.+|++++++.|+++
T Consensus 371 ~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~ 446 (473)
T 3dan_A 371 MLFGYQPFATKDPKVFDRPEEYVPDRFVGDGE----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRR 446 (473)
T ss_dssp EEEEEHHHHTTCTTTSSSTTSCCTTTTSGGGG----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEechHHhhCCchhcCCcccCCccccCCCcc----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998622 223455555555 99999999999999999999999
Q ss_pred ceeeCCCC
Q 038171 469 FDWEMPPG 476 (509)
Q Consensus 469 ~~~~~~~~ 476 (509)
|++...++
T Consensus 447 f~~~~~~~ 454 (473)
T 3dan_A 447 YDSFEIEL 454 (473)
T ss_dssp EEEEEEEE
T ss_pred CCeEEccC
Confidence 99765443
No 56
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=2.7e-61 Score=462.23 Aligned_cols=385 Identities=17% Similarity=0.191 Sum_probs=300.8
Q ss_pred ccccccCCC----CCCCchhHHHHHhhhCCeE-----EEeecCccEEEecCHHHHHHHHHhCCccccCCCchh-hhh--c
Q 038171 42 FIGNLHQFD----SSKPHVSFWELSKKYGPLM-----SLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV-ATQ--R 109 (509)
Q Consensus 42 ~~G~~~~~~----~~~~~~~~~~~~~kyG~v~-----~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~-~~~--~ 109 (509)
.+|+.+++. ..+++.++.+++ +||||+ ++++ .+.++|+||+.+++++.++ ..|..++... ... .
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~ 86 (414)
T 2uuq_A 11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELE 86 (414)
T ss_dssp --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHH
T ss_pred hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccc
Confidence 345554443 357888898885 799999 8776 6899999999999999875 5566665431 111 1
Q ss_pred c-c-cCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchH-HHHHHhHHHHHH
Q 038171 110 L-T-YNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLS-EKTMSLSCNTIC 186 (509)
Q Consensus 110 ~-~-~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~-~~~~~~~~~vi~ 186 (509)
. . ..+.+ ++..+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.+. +++|+. +++..+++++++
T Consensus 87 ~~~~~~~~~-l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~vdl~~~~~~~~~~~vi~ 160 (414)
T 2uuq_A 87 MIGLHDTPP-MVMQDPPVHTEFRKL-VSRGFTPRQVETVEPTVRKFVVERLEKLRAN----GGGDIVTELFKPLPSMVVA 160 (414)
T ss_dssp HHTCSSSCC-GGGCCTTHHHHHHHH-HHTTSSHHHHHHHHHHHHHHHHHHHHHHHHT----TEEEHHHHTTTHHHHHHHH
T ss_pred ccccccccc-cccCCchhHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccHHHHHHHHhHHHHHH
Confidence 1 1 22333 445589999999998 7899999999999999999999999999752 469997 556799999999
Q ss_pred HHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhcccccc-chhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcc
Q 038171 187 RLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYS-PFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPK 265 (509)
Q Consensus 187 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 265 (509)
. +||.+.+. .+.+......+... ..+ |.. .+..++.+.+.+++.+.+++++++.
T Consensus 161 ~-~~G~~~~~-------~~~~~~~~~~~~~~-------~~~~p~~----------~~~~~~~~~~~~~~~~~i~~r~~~~ 215 (414)
T 2uuq_A 161 H-YLGVPEED-------WTQFDGWTQAIVAA-------NAVDGAT----------TGALDAVGSMMAYFTGLIERRRTEP 215 (414)
T ss_dssp H-HTTCCGGG-------HHHHHHHHHHHHHH-------HHC---------------CCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred H-HhCCCHHH-------HHHHHHHHHHHHhh-------cccCCch----------hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 69987641 23343333332221 011 210 1233456677888888888876641
Q ss_pred ccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCC
Q 038171 266 RTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGN 345 (509)
Q Consensus 266 ~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~ 345 (509)
..|+++.|+++..+ ..+..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+
T Consensus 216 -------~~dll~~ll~~~~~-~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------- 280 (414)
T 2uuq_A 216 -------ADDAISHLVAAGVG-ADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------- 280 (414)
T ss_dssp -------CSSHHHHHHHTTTT-CTTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------
T ss_pred -------CCCHHHHHHhcccc-cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-------
Confidence 17999999987431 012358899999999999999999999999999999999999999999985
Q ss_pred CCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCC-CCCCCCCCCcC
Q 038171 346 KSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW-ENPEEFNPERF 424 (509)
Q Consensus 346 ~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~ 424 (509)
+|++|||+|+||++|++| .++|.+.+|++++||.||||+.|+++.+++||||++| +||++||||||
T Consensus 281 ------------~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~ 347 (414)
T 2uuq_A 281 ------------EGIPDAVEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRC 347 (414)
T ss_dssp ------------GGHHHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCC
T ss_pred ------------HHHHHHHHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCC
Confidence 489999999999999999 5789999999999999999999999999999999999 99999999998
Q ss_pred CCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEe
Q 038171 425 IDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAK 503 (509)
Q Consensus 425 l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (509)
. ..++|||+|+|.|+|++||++|++++++.|+++| ++++.++ + .....+.+.++..++.|+++
T Consensus 348 ~----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~----~--~~~~~~~~~~~~~~lpv~~~ 411 (414)
T 2uuq_A 348 P----------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAES----R--IVWSGGSYVRRPLSVPFRVT 411 (414)
T ss_dssp C----------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEECGG----G--CEECCCSSBCCEEECEEEEC
T ss_pred C----------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCC----C--ccccccccccCcceeEEEec
Confidence 4 2479999999999999999999999999999999 6998632 2 12234556677789999998
Q ss_pred ec
Q 038171 504 YH 505 (509)
Q Consensus 504 ~~ 505 (509)
||
T Consensus 412 ~r 413 (414)
T 2uuq_A 412 SS 413 (414)
T ss_dssp --
T ss_pred CC
Confidence 87
No 57
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=4.8e-60 Score=451.24 Aligned_cols=367 Identities=18% Similarity=0.260 Sum_probs=291.8
Q ss_pred CCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCchhh-hhccccCCcce-EecCCc----
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPASVA-TQRLTYNGLDL-IFSPYG---- 123 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g---- 123 (509)
..+++.++.+| ++||||+++++ ++.+.++|+||+.+++++.++ .|..++.... ..... .+.+. ++..+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~ 100 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAES 100 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCCC
Confidence 56788999999 89999999997 789999999999999999864 2444433211 11111 13331 455679
Q ss_pred --hhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccc
Q 038171 124 --EYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEA 200 (509)
Q Consensus 124 --~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 200 (509)
+.|+++||. +.+.|++..++.+.+.+++.++++++.+.. .++++|+...+ ..+++++++. +||.+.+
T Consensus 101 ~~~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~----- 170 (404)
T 2xbk_A 101 GRRQHAETRRL-LTPLFSARRVLEMQPKVEEAADTLLDAFIA---QGPPGDLHGELTVPFALTVLCE-VIGVPPQ----- 170 (404)
T ss_dssp HHHHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---TCSSEEHHHHTHHHHHHHHHHH-HHTCCGG-----
T ss_pred CCchHHHHHHH-hhhhcCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCeeHHHHHHHHHHHHHHHH-HhCCCHH-----
Confidence 999999998 789999999999999999999999999974 45689998766 5699999997 7998653
Q ss_pred hhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHH
Q 038171 201 ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVL 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 280 (509)
..+.+.+....+.. .. .| + +..++.+.+.+++.+.+++++++. .+|+++.|
T Consensus 171 --~~~~~~~~~~~~~~------~~--~~---------p---~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l 221 (404)
T 2xbk_A 171 --RRAELTTLLAGIAK------LD--DR---------E---GAVRAQDDLFGYVAGLVEHKRAEP-------GPDIISRL 221 (404)
T ss_dssp --GHHHHHHHHHHHTB------SS--CH---------H---HHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH
T ss_pred --HHHHHHHHHHHHHh------cc--Cc---------H---HHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHh
Confidence 12233333222111 00 01 1 344566778888888888776532 16899888
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhH
Q 038171 281 LQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYL 360 (509)
Q Consensus 281 l~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l 360 (509)
+ . + .++++++..++..+++||+|||+++++|++++|++||++|+++++|++ |+
T Consensus 222 -~----~--~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l 274 (404)
T 2xbk_A 222 -N----D--G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-------------------VM 274 (404)
T ss_dssp -H----S--S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-------------------HH
T ss_pred -h----c--C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HH
Confidence 1 2 1 699999999999999999999999999999999999999999999863 79
Q ss_pred HHHHHhhhccCCCCc-ccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceee
Q 038171 361 KAVVKETMRLQPPAP-LLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFI 439 (509)
Q Consensus 361 ~a~i~EtlRl~p~~~-~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~ 439 (509)
+|||+|+||++|++| ..++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||. ..++
T Consensus 275 ~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l 344 (404)
T 2xbk_A 275 ARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTP----------NPHL 344 (404)
T ss_dssp HHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSS----------CCCC
T ss_pred HHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCC----------CCCC
Confidence 999999999999999 55789999999999999999999999999999999999999999999983 3579
Q ss_pred cccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEE
Q 038171 440 PFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL 501 (509)
Q Consensus 440 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (509)
|||+|+|.|+|++||++|++++++.|+++| ++++.++. ++ +....+.+.+....+.|+
T Consensus 345 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~--~~~~~~~~~~~~~~lpv~ 403 (404)
T 2xbk_A 345 TFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPV--EQ--LRLKEGQLSGGFAELRVV 403 (404)
T ss_dssp TTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCBCSSBTTCCBSCCEEE
T ss_pred CCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCC--Cc--ceeccCcccCCcceeeee
Confidence 999999999999999999999999999999 68886542 12 223344445555566654
No 58
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=8.2e-61 Score=458.34 Aligned_cols=373 Identities=21% Similarity=0.317 Sum_probs=298.2
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCch--h----hhh---cc-c----cCCcc
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPAS--V----ATQ---RL-T----YNGLD 116 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~--~----~~~---~~-~----~~~~~ 116 (509)
..+++..+.+| ++||||+++++++.+.++|+||+.+++++.++ .|..++.. . ... .. . ..+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 56788999999 89999999999999999999999999999876 45555432 1 100 11 0 01333
Q ss_pred eEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCC
Q 038171 117 LIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSD 195 (509)
Q Consensus 117 ~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~ 195 (509)
++..+|+.|+++||. +.+.|++..++.+.+.+++.++++++.+.. ++++|+...+ ..+++++++.+ ||.+.+
T Consensus 90 -l~~~~g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~vi~~~-~G~~~~ 162 (404)
T 1z8o_A 90 -MGTSDPPTHTRLRKL-VSQEFTVRRVEAMRPRVEQITAELLDEVGD----SGVVDIVDRFAHPLPIKVICEL-LGVDEK 162 (404)
T ss_dssp -GGGCCTTHHHHHHHH-HHTTSCHHHHHHTHHHHHHHHHHHHHTSCS----SSEEEHHHHTTTHHHHHHHHHH-TTCCGG
T ss_pred -cccCCCcHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHhhhh----cCCcchHHHHhHHHHHHHHHHH-hCCCHH
Confidence 455689999999998 789999999999999999999999998753 5689998765 68999999985 998654
Q ss_pred CCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcch
Q 038171 196 GNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQED 275 (509)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 275 (509)
. .+.+......+.. . ..| . .++..++.+.+.+++.+.+++++++. .+|
T Consensus 163 ~-------~~~~~~~~~~~~~----~----~~p---------~-~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d 210 (404)
T 1z8o_A 163 Y-------RGEFGRWSSEILV----M----DPE---------R-AEQRGQAAREVVNFILDLVERRRTEP-------GDD 210 (404)
T ss_dssp G-------TTTHHHHHHHHHC----C----CGG---------G-HHHHHHHHHHHHHHHHHHHHHHHHSC-------CSS
T ss_pred H-------HHHHHHHHHHHhc----c----CCh---------h-HHHHHHHHHHHHHHHHHHHHHHHhCC-------CCC
Confidence 2 2233333332221 0 012 1 33455667788888888888876532 178
Q ss_pred HHHHHHHH-HHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhh
Q 038171 276 LVDVLLQI-RKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDV 354 (509)
Q Consensus 276 ~l~~ll~~-~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~ 354 (509)
+++.|+++ ..+ +..++++++..++..+++||+|||+++++|++++|++||++|++|++|+
T Consensus 211 ll~~ll~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~---------------- 271 (404)
T 1z8o_A 211 LLSALIRVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP---------------- 271 (404)
T ss_dssp HHHHHHHCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG----------------
T ss_pred HHHHHHhhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH----------------
Confidence 99999975 332 1358999999999999999999999999999999999999999999984
Q ss_pred ccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 038171 355 QELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGK 434 (509)
Q Consensus 355 ~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~ 434 (509)
.|++|||+|+||++|++| .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||.
T Consensus 272 ---~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~--------- 338 (404)
T 1z8o_A 272 ---SALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT--------- 338 (404)
T ss_dssp ---GGHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------
T ss_pred ---HhHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC---------
Confidence 379999999999999999 5789999999999999999999999999999999999999999999983
Q ss_pred CceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEE
Q 038171 435 NFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLA 502 (509)
Q Consensus 435 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (509)
..++|||+|+|.|+|++||++|++++++.|+++| ++++.++. .+ +....+.+.+....+.|++
T Consensus 339 -~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~--~~--~~~~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 339 -RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDA--DD--VVWRRSLLLRGIDHLPVRL 402 (404)
T ss_dssp -TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCCCCCSSSCCCSCCEEET
T ss_pred -CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCC--Cc--ceeccccccCCcceeEEEe
Confidence 2479999999999999999999999999999999 48886542 12 2233455666777777765
No 59
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=9.8e-61 Score=461.43 Aligned_cols=396 Identities=16% Similarity=0.172 Sum_probs=300.2
Q ss_pred CCCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEe--------ecCccEEEecCHHHHHHHHHhCCccccCCC
Q 038171 31 SSLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLR--------IGFVPTLIVSSAKMAKETLKAHDLQFSGRP 102 (509)
Q Consensus 31 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~--------~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~ 102 (509)
...||+|.++++++....- ..+++..+.++ ++||||+++. +|+.++++|+||+.++++++++ ..|+.++
T Consensus 17 ~~~p~~~~~~~~~~~~~~~-~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~ 93 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYA-ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYE 93 (433)
T ss_dssp ---CCCCTTCCTTCHHHHT-TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTT
T ss_pred cCCCCCCCCCCCCCHHHhh-cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCc
Confidence 3456667667766655433 45789999999 7899999998 4557899999999999999754 4465554
Q ss_pred chhhhh--------ccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchH
Q 038171 103 ASVATQ--------RLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLS 174 (509)
Q Consensus 103 ~~~~~~--------~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~ 174 (509)
...... .... +...++..+|+.|+++||. +.+.|++..++.+.+.+.+.++.+++.+.. ++++|+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~d~~ 167 (433)
T 3ivy_A 94 NGVIPRFKNDIAREDIEV-QRFVMLNMDAPHHTRLRKI-ISRGFTPRAVGRLHDELQERAQKIAAEAAA----AGSGDFV 167 (433)
T ss_dssp TCSCCCCCTTCCHHHHHG-GGGSGGGCCTTHHHHHHHH-HGGGSCHHHHHTTHHHHHHHHHHHHHHHHH----HCEEEHH
T ss_pred cccccccccccccccccc-ccCCccccChHHHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHhh----CCCeeHH
Confidence 322211 1111 2234556789999999998 699999999999999999999999999874 3579999
Q ss_pred HHH-HHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHH
Q 038171 175 EKT-MSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRF 253 (509)
Q Consensus 175 ~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~ 253 (509)
..+ ..+++++|+.+ ||.+.. ....+. .....+ .....|.... .+..++.+.+.++
T Consensus 168 ~~~~~~~~~~vi~~l-~G~~~~-------~~~~~~----~~~~~~----~~~~~p~~~~--------~~~~~~~~~~~~~ 223 (433)
T 3ivy_A 168 EQVSCELPLQAIAGL-LGVPQE-------DRGKLF----HWSNEM----TGNEDPEYAH--------IDPKASSAELIGY 223 (433)
T ss_dssp HHTTSHHHHHHHHHH-HTCCHH-------HHHHHH----HHHTTC----SCCCCGGGTT--------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-cCCCHH-------HHHHHH----HHHHHH----hccCCchhhh--------HHHHHHHHHHHHH
Confidence 988 99999999996 885321 112221 111111 1112232111 1344566778888
Q ss_pred HHHHHHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHH
Q 038171 254 YQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKK 333 (509)
Q Consensus 254 ~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~ 333 (509)
+.+++++++++. .+|+++.|+++..++ ..++++++..++..+++||+|||+++++|++++|++||++|++
T Consensus 224 ~~~~i~~r~~~~-------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~ 293 (433)
T 3ivy_A 224 AMKMAEEKAKNP-------ADDIVTQLIQADIDG---EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWEL 293 (433)
T ss_dssp HHHHHHHC--------------CHHHHHSCC--C---CCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHhcCC-------CCcHHHHHHhhhcCC---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHH
Confidence 899998876542 178999999765433 3699999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCC
Q 038171 334 VQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAW 413 (509)
Q Consensus 334 l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~ 413 (509)
+++|++ +|||+|+||++|+++. ++|.+++|++++||.||+|+.|+++.+++||||++|
T Consensus 294 l~~E~~---------------------~a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f 351 (433)
T 3ivy_A 294 YKKVRP---------------------ETAADEIVRWATPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVF 351 (433)
T ss_dssp HHHHCC---------------------TTHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS
T ss_pred HHhCcc---------------------cchhHHHhhhCcchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhC
Confidence 999964 6899999999999998 689999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCceeeccc-CCCCCCCChhHHHHHHHHHHHHhHhcce-eeCCCCCCCCcCCCCCCCCce
Q 038171 414 ENPEEFNPERFIDRSVDFKGKNFEFIPFG-AGRRICPGMHLGIATVDLALANLLYKFD-WEMPPGMKKQDLDFDSLSGIT 491 (509)
Q Consensus 414 ~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg-~G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~ 491 (509)
+||++|||+||. ..++||| +|+|.|+|++||.+|++++++.|+++|+ +++..+.. + .....+
T Consensus 352 ~dp~~F~p~R~~----------~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~---~---~~~~~~ 415 (433)
T 3ivy_A 352 QDPFTFNILRNP----------NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPE---R---LRSGWL 415 (433)
T ss_dssp SSTTSCCTTCCS----------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCE---E---CCCSSB
T ss_pred CCcCccCCCCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCc---e---eccCcc
Confidence 999999999983 2579999 9999999999999999999999999999 99864421 1 112223
Q ss_pred eeeccceEEEEeecccC
Q 038171 492 VHKKNFLVLLAKYHEYV 508 (509)
Q Consensus 492 ~~~~~~~~~~~~~~~~~ 508 (509)
..+ ..+.|++++|.-+
T Consensus 416 ~g~-~~lpv~~~~R~~~ 431 (433)
T 3ivy_A 416 NGI-KHWQVDYTGRCPV 431 (433)
T ss_dssp CCE-EECEEESCC----
T ss_pred cCc-ceeEEEEeccccC
Confidence 333 3789999998754
No 60
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.3e-60 Score=460.85 Aligned_cols=363 Identities=17% Similarity=0.221 Sum_probs=286.9
Q ss_pred CchhHHHHHhhhCCeE--EEe-ecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccc------------cCCcceE
Q 038171 54 PHVSFWELSKKYGPLM--SLR-IGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLT------------YNGLDLI 118 (509)
Q Consensus 54 ~~~~~~~~~~kyG~v~--~i~-~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 118 (509)
++..+.++ ++||||+ ++. +|+.++++|++++.++++++++ ..|+.++......... ......+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 67778888 6799999 888 7889999999999999999765 5566655422211000 0012345
Q ss_pred ecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCC
Q 038171 119 FSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGN 197 (509)
Q Consensus 119 ~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~ 197 (509)
+..+|+.|+++||+ +.+.|+++.++.+.+.++++++++++.+.+ .++++|+...+ ..+++++|+.+ ||.+..
T Consensus 125 ~~~dg~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~---~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~-- 197 (450)
T 3tkt_A 125 VQMDAPKHPKLRRL-TQDWFMPKNLARLDGEIRKIANEAIDRMLG---AGEEGDFMALVAAPYPLHVVMQI-LGVPPE-- 197 (450)
T ss_dssp GGCCTTHHHHHHHH-HHTTTSHHHHGGGHHHHHHHHHHHHHHHHH---TCSEEEHHHHTTTHHHHHHHHHH-TTCCGG--
T ss_pred ccCCCHHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEeeHHHHHHHHHHHHHHHH-cCCChh--
Confidence 66789999999999 789999999999999999999999999975 26789998888 69999999996 886542
Q ss_pred ccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHH
Q 038171 198 EEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLV 277 (509)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l 277 (509)
....+.+....+. ........+++.++.......++..++.+.+.+++.+++++++++. .+|++
T Consensus 198 -----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll 261 (450)
T 3tkt_A 198 -----DEPKMLFLTQQMF----GGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP-------TDDVA 261 (450)
T ss_dssp -----GHHHHHHHHHTTS----CCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHH
T ss_pred -----HHHHHHHHHHHHh----ccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHH
Confidence 2233333322221 1111122233222222223456677788888999999998876542 17899
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccc
Q 038171 278 DVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQEL 357 (509)
Q Consensus 278 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~l 357 (509)
+.|+++..++ ..++++++.++++.+++||+|||+++++|++++|++||++|++|++|+
T Consensus 262 ~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------- 319 (450)
T 3tkt_A 262 TVIANAVVDG---EPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR------------------- 319 (450)
T ss_dssp HHHHTCEETT---EECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------
T ss_pred HHHHhccccC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH-------------------
Confidence 9998764422 369999999999999999999999999999999999999999999985
Q ss_pred hhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCce
Q 038171 358 HYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFE 437 (509)
Q Consensus 358 p~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~ 437 (509)
+|++|||+|+||++|+++. ++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||- ..
T Consensus 320 ~~l~a~i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~ 388 (450)
T 3tkt_A 320 NLLPGIVEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NR 388 (450)
T ss_dssp GGHHHHHHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TC
T ss_pred HHHHHHHHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CC
Confidence 4799999999999999994 789999999999999999999999999999999999999999999952 35
Q ss_pred eecccCCCCCCCChhHHHHHHHHHHHHhHhcce-eeCC
Q 038171 438 FIPFGAGRRICPGMHLGIATVDLALANLLYKFD-WEMP 474 (509)
Q Consensus 438 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~ 474 (509)
++|||+|+|.|+|++||.+|++++++.|+++|+ +++.
T Consensus 389 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~ 426 (450)
T 3tkt_A 389 HLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELA 426 (450)
T ss_dssp SSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEES
T ss_pred CCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeC
Confidence 799999999999999999999999999999998 6665
No 61
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=4.5e-60 Score=456.32 Aligned_cols=358 Identities=16% Similarity=0.206 Sum_probs=290.8
Q ss_pred CCCchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHhCCccccCCCch--h-hhhccccCCcceEecC
Q 038171 52 SKPHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKAHDLQFSGRPAS--V-ATQRLTYNGLDLIFSP 121 (509)
Q Consensus 52 ~~~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 121 (509)
.+++..+.+|+ +||||++++++ +.++++|+||+.+++++.++ ..|..++.. . ........+.+ ++..
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~ 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVL 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccC
Confidence 45778888986 69999999986 67899999999999999875 456666531 1 11111101223 4455
Q ss_pred CchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccc
Q 038171 122 YGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEA 200 (509)
Q Consensus 122 ~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 200 (509)
+|+.|+++|+. +.+.|++..++.+.+.+++.++++++.+... .++.++|+..++ ..+++++++.+ ||.+.+.
T Consensus 121 dg~~h~~~R~~-l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~---- 193 (435)
T 2wm5_A 121 DDPRHQRLRSI-VSRAFTPKVVARIEAAVRDRAHRLVSSMIAN-NPDRQADLVSELAGPLPLQIICDM-MGIPKAD---- 193 (435)
T ss_dssp CTTHHHHHHHH-HHHTCCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGG----
T ss_pred CcHHHHHHHHH-hHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHH----
Confidence 79999999998 7899999999999999999999999999763 234589999876 78999999999 9987642
Q ss_pred hhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHH
Q 038171 201 ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVL 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 280 (509)
.+.+.+....+.... .|.+. ...++..++.+.+.+++.+.+++++++. ..|+++.|
T Consensus 194 ---~~~~~~~~~~~~~~~--------~p~~~------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l 249 (435)
T 2wm5_A 194 ---HQRIFHWTNVILGFG--------DPDLA------TDFDEFMQVSADIGAYATALAEDRRVNH-------HDDLTSSL 249 (435)
T ss_dssp ---HHHHHHHHHHHHHTT--------CTTSC------CCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH
T ss_pred ---HHHHHHHHHHHhccC--------Ccchh------hhHHHHHHHHHHHHHHHHHHHHHHhcCC-------CCCHHHHH
Confidence 234444444333211 13211 1123556677788888999998876531 17999999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhH
Q 038171 281 LQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYL 360 (509)
Q Consensus 281 l~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l 360 (509)
+++..+ +..++++++..++..+++||+|||+++++|++++|++||++|+++++|++ +|+
T Consensus 250 l~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~~l 308 (435)
T 2wm5_A 250 VEAEVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD------------------GLA 308 (435)
T ss_dssp HHCCBT---TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH------------------HHH
T ss_pred Hhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH------------------hHH
Confidence 976432 23699999999999999999999999999999999999999999999975 389
Q ss_pred HHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeec
Q 038171 361 KAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIP 440 (509)
Q Consensus 361 ~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~ 440 (509)
+|||+|+||++|++| .++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+|| +..++|
T Consensus 309 ~a~i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~----------~~~~lp 377 (435)
T 2wm5_A 309 PTAVEEIVRWASPVV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN----------PNPHLG 377 (435)
T ss_dssp HHHHHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC----------SCCCCT
T ss_pred HHHHHHHHhhcCccc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC----------CCCCCC
Confidence 999999999999999 578999999999999999999999999999999999999999999994 134899
Q ss_pred ccC-CCCCCCChhHHHHHHHHHHHHhHhcce-eeCCC
Q 038171 441 FGA-GRRICPGMHLGIATVDLALANLLYKFD-WEMPP 475 (509)
Q Consensus 441 Fg~-G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~ 475 (509)
||+ |+|.|+|++||.+|++++++.||++|+ +++.+
T Consensus 378 FG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~ 414 (435)
T 2wm5_A 378 FGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATE 414 (435)
T ss_dssp TCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECC
Confidence 999 999999999999999999999999997 99865
No 62
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=3.7e-60 Score=456.33 Aligned_cols=381 Identities=16% Similarity=0.166 Sum_probs=300.0
Q ss_pred CCCCchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHH
Q 038171 51 SSKPHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREI 129 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 129 (509)
..+++.++.++++++| ||+++..++ +.++|+||+.+++++++ ...|..++......... .+...++..+|+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~-~~~~~~~~~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRS-PERFSSRVIWVPREAGE-AYDMVPTKLDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEETTCCSSSHHHHH-HCCCTTTTCCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcC-hhhccCCcccCCccccc-ccccCCccCCcHHHHHH
Confidence 3578888999887766 899998776 58999999999999954 34566555322111111 12234566689999999
Q ss_pred HHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhhHHH
Q 038171 130 RKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRSRFH 208 (509)
Q Consensus 130 Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~ 208 (509)
|+. +.+.|++..++.+.+.+.+.++++++.+.. ++++|+...+ ..++.++++. +||.+.+ ....+.
T Consensus 114 R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~-------~~~~~~ 180 (421)
T 3lxh_A 114 RKA-IDKGLNLAEIRKLEDQIRTIAVEIIEGFAD----RGHCEFGSEFSTVFPVRVFLA-LAGLPVE-------DATKLG 180 (421)
T ss_dssp HHH-HHHHHSHHHHHTTHHHHHHHHHHHHHTTTT----TSEEEHHHHTTTTHHHHHHHH-HHTCCGG-------GHHHHH
T ss_pred HHH-HhhhcCHHHHHHHHHHHHHHHHHHHHHHhh----cCCeehHHHHHHHHHHHHHHH-HcCCCHH-------HHHHHH
Confidence 998 789999999999999999999999998853 4578876665 5577777776 5887543 223343
Q ss_pred HHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcC
Q 038171 209 TLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRG 288 (509)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 288 (509)
+....+... ....|. ...++..++.+.+.+++.+.+++++++. .+|+++.|+++..++
T Consensus 181 ~~~~~~~~~------~~~~p~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~~~~~- 238 (421)
T 3lxh_A 181 LLANEMTRP------SGNTPE--------EQGRSLEAANKGFFEYVAPIIAARRGGS-------GTDLITRILNVEIDG- 238 (421)
T ss_dssp HHHHHHHSC------CCSSHH--------HHHHHHHHHHHHHHHHHHHHHHHHTTCC-------CCSHHHHHHTSCBTT-
T ss_pred HHHHHHhcc------ccCCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhhhccC-
Confidence 333333211 111221 2245667788889999999999887652 179999999864432
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhh
Q 038171 289 FKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETM 368 (509)
Q Consensus 289 ~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~Etl 368 (509)
..++++++.++++.+++||+|||+++++|++++|++||++|++|++|++ |++|||+|+|
T Consensus 239 --~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E~l 297 (421)
T 3lxh_A 239 --KPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL-------------------KLQRGVEELF 297 (421)
T ss_dssp --BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-------------------HHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------HHHHHHHHHH
Confidence 3699999999999999999999999999999999999999999999975 7899999999
Q ss_pred ccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCC
Q 038171 369 RLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRIC 448 (509)
Q Consensus 369 Rl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C 448 (509)
|++|++ . ++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+|| +..++|||+|+|.|
T Consensus 298 Rl~p~~-~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C 365 (421)
T 3lxh_A 298 RRFAVV-S-DARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRC 365 (421)
T ss_dssp HHCCCB-E-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSC
T ss_pred HhcCcc-C-CceeeCCCeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccC
Confidence 999999 4 67999999999999999999999999999999999999999999995 34689999999999
Q ss_pred CChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecccC
Q 038171 449 PGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHEYV 508 (509)
Q Consensus 449 ~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (509)
+|++||.+|++++++.|+++| ++++.++.. . ....+.+..++ .+.|+++||..+
T Consensus 366 ~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~---~--~~~~~~~~~~~-~lpv~~~p~~~~ 420 (421)
T 3lxh_A 366 AGMHLARLEVTVMLQEWLARIPEFRLKDRAV---P--IYHSGIVAAVE-NIPLEWEPQRVS 420 (421)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCCCEECTTCC---C--EEECSSBCEEE-CCEEECCCC---
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCcEECCCCC---c--eeccccccCce-eeeEEEeccccC
Confidence 999999999999999999999 999876532 1 12233445555 699999998653
No 63
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=1.1e-59 Score=453.49 Aligned_cols=382 Identities=20% Similarity=0.274 Sum_probs=300.7
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccc-------cCCcceEecCCc
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLT-------YNGLDLIFSPYG 123 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~g 123 (509)
..+++.++.++ ++||||++++.| .++|+||+.++++++++ ..++.++......... ..+...++..+|
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 102 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDP 102 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCCT
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcCC
Confidence 67899999988 578999998765 99999999999999764 3344444322111111 012234556679
Q ss_pred hhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchh
Q 038171 124 EYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAIS 202 (509)
Q Consensus 124 ~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~ 202 (509)
+.|+++||. +.+.|+++.++.+.+.+++.++.+++ +. .++++|+...+ ..+++++++. +||.+..
T Consensus 103 ~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~-l~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------- 168 (418)
T 3r9b_A 103 PDHTRLRGL-VSKAFAPRVIKRLEPEITALVDQLLD-AV----DGPEFNLIDNLAYPLPVAVICR-LLGVPIE------- 168 (418)
T ss_dssp THHHHHHHH-HHGGGSHHHHGGGHHHHHHHHHHHHH-TC----CSSEEEHHHHTTTHHHHHHHHH-HHTCCGG-------
T ss_pred chHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHh-hh----ccCCeehHHHHhCcCCHHHHHH-HcCCCHH-------
Confidence 999999998 78999999999999999999999999 64 34589976555 6899999999 8998664
Q ss_pred hhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHH
Q 038171 203 GRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQ 282 (509)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~ 282 (509)
....+......+...+.. .+.+.++ .....++..++.+.+.+++.+.+++++++. ..|+++.|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~-------~~d~l~~ll~ 233 (418)
T 3r9b_A 169 DEPKFSRASALLAAALDP------FLALTGE--TSDLFDEQMKAGMWLRDYLRALIDERRRTP-------GEDLMSGLVA 233 (418)
T ss_dssp GHHHHHHHHHHHHHTTSC------HHHHHSS--CCTTHHHHHHHHHHHHHHHHHHHHHTTTSC-------CSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCc------ccccccc--CHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------CccHHHHHHH
Confidence 223444444433322211 1100111 113345677788889999999999887642 1799999998
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHH
Q 038171 283 IRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKA 362 (509)
Q Consensus 283 ~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a 362 (509)
+..++ ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |++|
T Consensus 234 ~~~~~---~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a 291 (418)
T 3r9b_A 234 VEESG---DQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS-------------------RASA 291 (418)
T ss_dssp HHHHS---SSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG-------------------GHHH
T ss_pred hhhcc---CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH-------------------hHHH
Confidence 86554 3699999999999999999999999999999999999999999999853 7899
Q ss_pred HHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeeccc
Q 038171 363 VVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFG 442 (509)
Q Consensus 363 ~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg 442 (509)
||+|+||++|+++. .+|.+++|++++||.||+|+.|+++.+++||||++|+||++|||+|+ ...++|||
T Consensus 292 ~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG 360 (418)
T 3r9b_A 292 VIEETMRYDPPVQL-VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFG 360 (418)
T ss_dssp HHHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTC
T ss_pred HHHHHHHhCCcccc-ceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCC
Confidence 99999999999998 56999999999999999999999999999999999999999999992 24579999
Q ss_pred CCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 443 AGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 443 ~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
+|+|.|+|++||.+|++++++.|+++| ++++..+ .....+.+.++...+.|++++|.
T Consensus 361 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-------~~~~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 361 KGAHFCLGAPLARLEATVALPALAARFPEARLSGE-------PEYKRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp CGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSC-------CEECSCSSBCCEEECEEEC----
T ss_pred CcCccCccHHHHHHHHHHHHHHHHHhCccceeCCC-------CccccCCcccCcceeEEEecCCC
Confidence 999999999999999999999999999 7888653 12345666777789999998873
No 64
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=3.3e-60 Score=453.79 Aligned_cols=351 Identities=19% Similarity=0.216 Sum_probs=283.8
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIR 130 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 130 (509)
..+++.++.+|+++ |||+++..++ +.++|+||+.++++++++ ..|..++....... ...+...+++.+|+.|+++|
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~-~~~~~~~~~~~~g~~h~~~R 98 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGL-GKVMQFIPLQQDGAEHKAFR 98 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTH-HHHHCCTTTTCCHHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcc-ccccccCccccCCcHHHHHH
Confidence 56889999999999 9999998874 589999999999999754 45666553211111 11112345667899999999
Q ss_pred HHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhhHHHH
Q 038171 131 KICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRSRFHT 209 (509)
Q Consensus 131 k~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (509)
|. +.+.|++..++.+.+.+.+.++++++.+.. ++++|+...+ ..++.++++. +||.+.. ....+..
T Consensus 99 ~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~----~~~~d~~~~~~~~~~~~v~~~-~~G~~~~-------~~~~~~~ 165 (396)
T 3oft_A 99 TP-VMKGLASRFVVALEPKVQAVARKLMESLRP----RGSCDFVSDFAEILPLNIFLT-LIDVPLE-------DRPRLRQ 165 (396)
T ss_dssp HH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHGG----GSEEEHHHHTTTTHHHHHHHH-HTTCCGG-------GHHHHHH
T ss_pred HH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhhh----cCCccHHHHHHHHHHHHHHHH-HcCCCHH-------HHHHHHH
Confidence 98 789999999999999999999999999864 3478887666 5566666665 6886543 2233333
Q ss_pred HHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCC
Q 038171 210 LLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGF 289 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 289 (509)
....+... ...++..++.+.+.+++.+.+++++++. ..|+++.|+++..++
T Consensus 166 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~d~l~~ll~~~~~~-- 216 (396)
T 3oft_A 166 LGVQLTRP--------------------DGSMTVEQLKQAADDYLWPFIEKRMAQP-------GDDLFSRILSEPVGG-- 216 (396)
T ss_dssp HHHHHHSC--------------------CSSCCHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHTSCBTT--
T ss_pred HHHHHhCC--------------------CCHHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhhccC--
Confidence 32222110 0012334566778888888888876642 179999999864432
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhc
Q 038171 290 KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMR 369 (509)
Q Consensus 290 ~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR 369 (509)
..++++++.++++.+++||+|||+++++|++++|++||++|+++++|++ |++|||+|+||
T Consensus 217 -~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l~a~i~E~lR 276 (396)
T 3oft_A 217 -RPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-------------------LIPAAADELMR 276 (396)
T ss_dssp -BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-------------------hHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999999999864 78999999999
Q ss_pred cCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCC
Q 038171 370 LQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449 (509)
Q Consensus 370 l~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 449 (509)
++|++ . ++|.+.+|++++||.||||+.|+++.+++||||++|+||++|||+||++ +..++|||+|+|.|+
T Consensus 277 l~p~~-~-~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~ 346 (396)
T 3oft_A 277 RYPTV-A-VSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLA--------PIRHTTMGVGAHRCV 346 (396)
T ss_dssp HCCCB-E-EEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCC--------GGGSSTTCCGGGCCT
T ss_pred hcCcc-c-CceecCCCEEECCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCC--------CCCcccCCCCCccCc
Confidence 99999 4 6799999999999999999999999999999999999999999999963 356899999999999
Q ss_pred ChhHHHHHHHHHHHHhHhcc-eeeCCCCC
Q 038171 450 GMHLGIATVDLALANLLYKF-DWEMPPGM 477 (509)
Q Consensus 450 G~~~a~~~~~~~l~~ll~~~-~~~~~~~~ 477 (509)
|++||.+|++++++.|+++| ++++.++.
T Consensus 347 G~~lA~~e~~~~l~~ll~~~~~~~l~~~~ 375 (396)
T 3oft_A 347 GAGLARMEVIVFLREWLGGMPEFALAPDK 375 (396)
T ss_dssp THHHHHHHHHHHHHHHHHHSCCEEECSSS
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceECCCC
Confidence 99999999999999999999 99988653
No 65
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=1.1e-59 Score=449.66 Aligned_cols=347 Identities=17% Similarity=0.215 Sum_probs=276.8
Q ss_pred CchhHHHHHhhhCCeEEEeec-Cc---cEEEecCHHHHHHHHHhCCccccCCCc------hhhhhcc--ccCCcceEecC
Q 038171 54 PHVSFWELSKKYGPLMSLRIG-FV---PTLIVSSAKMAKETLKAHDLQFSGRPA------SVATQRL--TYNGLDLIFSP 121 (509)
Q Consensus 54 ~~~~~~~~~~kyG~v~~i~~~-~~---~~vvv~dp~~~~~i~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~ 121 (509)
++..+.+|+++ |||++++++ |. ++++|+||+.+++++.+.. .|..++. ....... ...+. .++..
T Consensus 15 ~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 91 (398)
T 1lfk_A 15 GLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVG-NLMDY 91 (398)
T ss_dssp TTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTT-CGGGC
T ss_pred CCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCccccccccccc-Ccccc
Confidence 34456678877 999999875 55 8999999999999993222 3554443 1101101 11123 34456
Q ss_pred CchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHH-hHHHHHHHHHhcCCCCCCccc
Q 038171 122 YGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMS-LSCNTICRLAFGKRSDGNEEA 200 (509)
Q Consensus 122 ~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~-~~~~vi~~~~fG~~~~~~~~~ 200 (509)
+|+.|+++||. +.+.|++..++.+.+.++++++++++.+.. .++++|+..++.. ++.++++. +||.+.+
T Consensus 92 ~g~~~~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~----- 161 (398)
T 1lfk_A 92 DPPEHTRLRRK-LTPGFTLRKMQRMAPYIEQIVNDRLDEMER---AGSPADLIAFVADKVPGAVLCE-LVGVPRD----- 161 (398)
T ss_dssp CTTHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---HCSSEEHHHHTTTTHHHHHHHH-HHTCCGG-----
T ss_pred CCHHHHHHHHH-HHhhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHH-HcCCCHH-----
Confidence 79999999998 788999999999999999999999999974 3668999999987 88999997 5998653
Q ss_pred hhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHH
Q 038171 201 ISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVL 280 (509)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~l 280 (509)
..+.+......+ +. . + ...++..++.+.+.+++.+.+++++++. .+|+++.|
T Consensus 162 --~~~~~~~~~~~~---~~------~-~---------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-------~~dll~~l 213 (398)
T 1lfk_A 162 --DRDMFMKLCHGH---LD------A-S---------LSQKRRAALGDKFSRYLLAMIARERKEP-------GEGMIGAV 213 (398)
T ss_dssp --GHHHHHHHHHHT---TC------T-T---------SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHH
T ss_pred --HHHHHHHHHHHH---Hh------c-c---------cchHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHH
Confidence 122333222211 10 0 0 1123455667788888888888876532 17999999
Q ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhH
Q 038171 281 LQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYL 360 (509)
Q Consensus 281 l~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l 360 (509)
+++. + ..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++ |+
T Consensus 214 l~~~-~----~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~l 269 (398)
T 1lfk_A 214 VAEY-G----DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-------------------SA 269 (398)
T ss_dssp HHHH-G----GGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH-------------------HH
T ss_pred HHhc-C----CCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HH
Confidence 9876 2 2689999999999999999999999999999999999999999999864 79
Q ss_pred HHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeec
Q 038171 361 KAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIP 440 (509)
Q Consensus 361 ~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~ 440 (509)
+|||+|+||++|+++..++|.+.+|++++||.||||+.|+++.+++||||++|+||++||||||. ..++|
T Consensus 270 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~ 339 (398)
T 1lfk_A 270 QRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREP----------IPHVA 339 (398)
T ss_dssp HHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCC----------CCCCT
T ss_pred HHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCC----------CCCCC
Confidence 99999999999999966889999999999999999999999999999999999999999999983 24799
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCC
Q 038171 441 FGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPP 475 (509)
Q Consensus 441 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~ 475 (509)
||+|+|.|+|++||++|++++++.||++| ++++..
T Consensus 340 FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~ 375 (398)
T 1lfk_A 340 FGHGVHHCLGAALARLELRTVFTELWRRFPALRLAD 375 (398)
T ss_dssp TCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence 99999999999999999999999999999 798864
No 66
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=8.4e-60 Score=451.21 Aligned_cols=373 Identities=20% Similarity=0.243 Sum_probs=293.7
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecC--ccEEEecCHHHHHHHHHhCCccccCCCchhhhhcc--ccCC-cceEecCCchh
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGF--VPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRL--TYNG-LDLIFSPYGEY 125 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~--~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~g~~ 125 (509)
..+++..+.++++ ||||+++...| .+.++|++|+.++++++++ ..|+.++........ .... .+.++..+|+.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 113 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ 113 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence 3578888999987 99999997445 7899999999999999654 356655433221110 0001 34566678999
Q ss_pred HHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhh
Q 038171 126 WREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGR 204 (509)
Q Consensus 126 w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (509)
|+++||. +.+.|++..++.+.+.+++.++++++.+.. ++++|+..++ ..+++++|+. +||.+.. ..
T Consensus 114 h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~-------~~ 180 (415)
T 3mgx_A 114 HRKLRKL-VGPLLSRAAARKLAERVRIEVGDVLGRVLD----GEVCDAATAIGPRIPAAVVCE-ILGVPAE-------DE 180 (415)
T ss_dssp HHHHHHH-HGGGSSHHHHHHSHHHHHHHHHHHTTTSSS----SSCEESTTTTTTHHHHHHHHH-HHTCCGG-------GH
T ss_pred HHHHHHH-hHhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHH-HcCCCHH-------HH
Confidence 9999999 799999999999999999999999988753 3479999887 6799999998 5886432 22
Q ss_pred hHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHH
Q 038171 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIR 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (509)
..+.+....+... ......|. ...++.+.+.+++.+.+++++++. .+|+++.|+++.
T Consensus 181 ~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~ll~~~ 237 (415)
T 3mgx_A 181 DMLIDLTNHAFGG----EDELFDGM------------TPRQAHTEILVYFDELITARRKEP-------GDDLVSTLVTDD 237 (415)
T ss_dssp HHHHHHHHHHTSC----CC----CC------------CHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHCT
T ss_pred HHHHHHHHHHHcc----cCcccchH------------HHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHhCC
Confidence 3333333332211 11111110 112456677888888888876542 179999999742
Q ss_pred HhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHH
Q 038171 285 KHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364 (509)
Q Consensus 285 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i 364 (509)
.++++++..+++.+++||+|||+++++|++++|++||++|+++++|+ ||++|||
T Consensus 238 -------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l~a~i 291 (415)
T 3mgx_A 238 -------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-------------------ADVDTVV 291 (415)
T ss_dssp -------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-------------------SCHHHHH
T ss_pred -------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-------------------HhHHHHH
Confidence 58999999999999999999999999999999999999999999985 7999999
Q ss_pred HhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCC
Q 038171 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAG 444 (509)
Q Consensus 365 ~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G 444 (509)
+|+||++|+++. ++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||. ..++|||+|
T Consensus 292 ~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~----------~~~l~FG~G 360 (415)
T 3mgx_A 292 EEVLRWTSPAMH-VLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP----------NRHITFGHG 360 (415)
T ss_dssp HHHHHHHCCBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCCG
T ss_pred HHHHHhcCcccc-cceecCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCC----------CCCCCCCCC
Confidence 999999999995 689999999999999999999999999999999999999999999972 357999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEeec
Q 038171 445 RRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYH 505 (509)
Q Consensus 445 ~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (509)
+|.|+|++||.+|++++++.|+++| ++++..+. + ...+........+.|++++|
T Consensus 361 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~----~~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 361 MHHCLGSALARIELSVVLRVLAERVSRVDLEREP---A----WLRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp GGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC---E----ECSCSSBCCEEECEEEEEEC
T ss_pred CccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCc---c----cccCCcccCceeeeEEEecC
Confidence 9999999999999999999999999 89886431 1 12233334445788888887
No 67
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=1.4e-59 Score=448.27 Aligned_cols=370 Identities=17% Similarity=0.218 Sum_probs=287.8
Q ss_pred CCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCcccc-C-CCch--hhhh--cccc-CCcceEecCC
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFS-G-RPAS--VATQ--RLTY-NGLDLIFSPY 122 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~~ 122 (509)
..+++..+.+| ++||||+++++ |+.+.++|+||+.+++++.++. |. . ++.. .... .... .+.+++++
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH--
Confidence 56889999999 99999999997 7899999999999999998652 44 3 2211 1110 0000 12233332
Q ss_pred chhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccch
Q 038171 123 GEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAI 201 (509)
Q Consensus 123 g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (509)
.|+++||. +.+.|++. ++.+.+.+.++++++++.+.+ +++++|+...+ ..+++++++. +||.+.+
T Consensus 90 --~h~~~R~~-~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~------ 155 (396)
T 1n40_A 90 --ADAGLRKA-VMKAITPK-APGLEQFLRDTANSLLDNLIT---EGAPADLRNDFADPLATALHCK-VLGIPQE------ 155 (396)
T ss_dssp --HHTTCHHH-HHHHTSSC-STTHHHHHHHHHHHHHHHHHH---HCSCEETTTTTHHHHHHHHHHH-HHTCCGG------
T ss_pred --HHHHHHHH-HHHhhChH-HHHhHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHhHHHHHHH-HhCCChh------
Confidence 89999998 78899999 999999999999999999975 25689998665 4899999998 7998653
Q ss_pred hhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHH
Q 038171 202 SGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLL 281 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll 281 (509)
..+.+.+....+... ....|. ++..++.+.+ +++.+.++ + .+ . ..|+++.|+
T Consensus 156 -~~~~~~~~~~~~~~~------~~~~p~-----------~~~~~~~~~~-~~~~~~i~----~--~~-~--~~dll~~ll 207 (396)
T 1n40_A 156 -DGPKLFRSLSIAFMS------SADPIP-----------AAKINWDRDI-EYMAGILE----N--PN-I--TTGLMGELS 207 (396)
T ss_dssp -GHHHHHHTHHHHTBC------CSSCCH-----------HHHHHHHHHH-HHHHHHHH----C--TT-C--CSHHHHHHH
T ss_pred -hHHHHHHHHHHHhcc------ccCCCH-----------HHHHHHHHHH-HHHHHHHh----C--CC-C--CCCHHHHHH
Confidence 222333333322111 000121 2344455566 77777776 1 11 1 179999999
Q ss_pred HHHHh-cCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhH
Q 038171 282 QIRKH-RGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYL 360 (509)
Q Consensus 282 ~~~~~-~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l 360 (509)
++..+ . +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+ .|+
T Consensus 208 ~~~~~~~--~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-------------------~~l 266 (396)
T 1n40_A 208 RLRKDPA--YSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP-------------------ELI 266 (396)
T ss_dssp HHHTSGG--GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-------------------GGH
T ss_pred Hhhcccc--cCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH-------------------HHH
Confidence 87621 1 1369999999999999999999999999999999999999999999984 379
Q ss_pred HHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeec
Q 038171 361 KAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIP 440 (509)
Q Consensus 361 ~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~ 440 (509)
+|||+|+||++|++|..++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||.+ ..++|
T Consensus 267 ~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~ 337 (396)
T 1n40_A 267 PAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNP---------TSHLA 337 (396)
T ss_dssp HHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSST---------TCSST
T ss_pred HHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCC---------CCCCC
Confidence 999999999999999668899999999999999999999999999999999999999999999963 34799
Q ss_pred ccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEE
Q 038171 441 FGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLL 501 (509)
Q Consensus 441 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (509)
||+|+|.|+|++||++|++++++.|+++| ++++.++. .+ +....+.+.+....+.|+
T Consensus 338 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~--~~--~~~~~~~~~~~~~~lpv~ 395 (396)
T 1n40_A 338 FGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPI--DQ--LVWRTRFQRRIPERLPVL 395 (396)
T ss_dssp TCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG--GG--CCBCCSBSBCCBSCCEEE
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCc--cc--cccccccccCCcceeeee
Confidence 99999999999999999999999999999 58886542 12 223345555666666664
No 68
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=5.7e-59 Score=443.36 Aligned_cols=346 Identities=16% Similarity=0.218 Sum_probs=286.4
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecC----ccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGF----VPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYW 126 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~----~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 126 (509)
..+++..+.+++ +||||+++++++ .++++|+||+.+++++++ ...|..++........ ..+.+.+++.+|+.|
T Consensus 11 ~~~p~~~~~~lr-~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEELQ-KAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILAD-HERFSSMRPVDDEADR-ALLPGILQAYDPPDH 87 (384)
T ss_dssp TTEECHHHHHHH-HTCSEECCCCC------CEEEECCHHHHHHHHHC-TTTEECSCCCC------CCCTTCGGGCCTTHH
T ss_pred ccChhHHHHHHH-hcCCeeecccccccCCCCEEEEcCHHHHHHHHhC-chhccCCccccccccc-cccccccccCCChhH
Confidence 568899999995 999999999886 899999999999999954 4567666544322111 123455667789999
Q ss_pred HHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhH
Q 038171 127 REIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSR 206 (509)
Q Consensus 127 ~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~ 206 (509)
+++||. +.+.|+++.++.+.+.+++.++++++.+.+ .++++|+..++...+.+.+...+||.+.+ ..+.
T Consensus 88 ~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~---~~~~~d~~~~~~~~~~~~v~~~~~G~~~~-------~~~~ 156 (384)
T 3oo3_A 88 TRLRRT-VAPAYSARRMERLRPRIEEIVEECLDDFES---VGAPVDFVRHAAWPIPAYIACEFLGVPRD-------DQAE 156 (384)
T ss_dssp HHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHHHHH---SCSSEEHHHHTTTHHHHHHHHHHHTCCGG-------GHHH
T ss_pred HHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHHHHcCCCHH-------HHHH
Confidence 999998 789999999999999999999999999975 46789999999998888888888998653 2234
Q ss_pred HHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHh
Q 038171 207 FHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKH 286 (509)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~ 286 (509)
+.+.+..+.. . ...++..++.+.+.+++.+.+++++++. ..|+++.|++..
T Consensus 157 ~~~~~~~~~~----------~----------~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~d~l~~ll~~~-- 207 (384)
T 3oo3_A 157 LSRMIRESRE----------S----------RLPRQRTLSGLGIVNYTKRLTSGKRRDP-------GDGMIGVIVREH-- 207 (384)
T ss_dssp HHHHHHHHHH----------C----------SCHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHH--
T ss_pred HHHHHHHHhc----------c----------CChHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCHHHHHHHhc--
Confidence 4444333322 0 1123455666778888888888765432 179999999872
Q ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHh
Q 038171 287 RGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKE 366 (509)
Q Consensus 287 ~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~E 366 (509)
+ ..++++++..++..+++||+|||+++++|++++|++||++|+++++|++. ++|||+|
T Consensus 208 ~---~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-------------------l~a~i~E 265 (384)
T 3oo3_A 208 G---AEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-------------------IDSATEE 265 (384)
T ss_dssp G---GGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-------------------HHHHHHH
T ss_pred C---CCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-------------------HHHHHHH
Confidence 2 36999999999999999999999999999999999999999999999764 8999999
Q ss_pred hhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCC
Q 038171 367 TMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRR 446 (509)
Q Consensus 367 tlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r 446 (509)
+||++|++|..++|.+++|++++||.||||+.|+++.+++|| +||++|||+|| ...++|||+|+|
T Consensus 266 ~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r-----~dp~~F~PeR~----------~~~~~~FG~G~r 330 (384)
T 3oo3_A 266 VLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR-----APGDRFDITRE----------KATHMAFGHGIH 330 (384)
T ss_dssp HHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-----CTTCCCCTTCS----------CCCCCTTCCSTT
T ss_pred HHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-----CCcceeCCCCC----------CCCcCCCCCCCc
Confidence 999999999778899999999999999999999999999999 99999999996 345899999999
Q ss_pred CCCChhHHHHHHHHHHHHhHhcc-eeeCCCC
Q 038171 447 ICPGMHLGIATVDLALANLLYKF-DWEMPPG 476 (509)
Q Consensus 447 ~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~ 476 (509)
.|+|++||.+|++++++.|+++| ++++.++
T Consensus 331 ~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 361 (384)
T 3oo3_A 331 HCIGAPLARLQLRVALPAVVGRFPSLRLAVP 361 (384)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCeeCCC
Confidence 99999999999999999999999 9998765
No 69
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=6.2e-58 Score=440.19 Aligned_cols=378 Identities=17% Similarity=0.226 Sum_probs=292.7
Q ss_pred CCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHhCCccccCCCc---hhhhh-----ccccCCcceEecCC
Q 038171 52 SKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKAHDLQFSGRPA---SVATQ-----RLTYNGLDLIFSPY 122 (509)
Q Consensus 52 ~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~ 122 (509)
.+++..+.+++++ |||+++.. ++.++++|++++.++++++++. .|+..+. ..... .....+.+.++..+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCcccccC
Confidence 4678888898876 99999987 5678999999999999998753 3444331 11100 00011233456678
Q ss_pred chhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccch
Q 038171 123 GEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAI 201 (509)
Q Consensus 123 g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~ 201 (509)
|+.|+++|++ +.+.|++..++.+.+.+.+.++++++.+. .++++|+...+ ..++.++++. +||.+..
T Consensus 116 g~~h~~~R~~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l~----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~------ 183 (426)
T 3rwl_A 116 RPRHDEQRKA-VSPIVAPANLAALEGTIRERVSKTLDGLP----VGEEFDWVDRVSIEITTQMLAT-LFDFPFE------ 183 (426)
T ss_dssp TTHHHHHHHH-HGGGGCHHHHHHHHHHHHHHHHHHHHTSC----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGG------
T ss_pred chHHHHHHHH-hhhhhCHHHHHHHHHHHHHHHHHHHHHhh----cCCCcchHHHHHHHHHHHHHHH-HcCCCHH------
Confidence 9999999998 79999999999999999999999998873 46789987776 6788888886 7997543
Q ss_pred hhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHH
Q 038171 202 SGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLL 281 (509)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll 281 (509)
..+.+..... .+..... +.. ....+...++.+.+.+++.++++++.... +.+|+++.|+
T Consensus 184 -~~~~~~~~~~----~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------~~~dll~~ll 242 (426)
T 3rwl_A 184 -ERRKLTRWSD----VTTAAPG----GGV------VESWDQRKTELLECAAYFQVLWNERVNKD------PGNDLISMLA 242 (426)
T ss_dssp -GTHHHHHHHH----HHTCCTT----SSS------CSSHHHHHHHHHHHHHHHHHHHHHHHTSC------CCSSHHHHHH
T ss_pred -HHHHHHHHHH----HHHhccC----ccc------cccHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCCHHHHHH
Confidence 2223332221 1111100 100 01223445566788888889888873211 1179999999
Q ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHH
Q 038171 282 QIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLK 361 (509)
Q Consensus 282 ~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~ 361 (509)
++..++ .++++++.++++.+++||+|||+++++|++++|++||++|++|++|+ +|++
T Consensus 243 ~~~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~-------------------~~l~ 299 (426)
T 3rwl_A 243 HSPATR----NMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP-------------------ALVE 299 (426)
T ss_dssp HCGGGG----GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------GGHH
T ss_pred hcccCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh-------------------HhHH
Confidence 875443 58999999999999999999999999999999999999999999983 5899
Q ss_pred HHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecc
Q 038171 362 AVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPF 441 (509)
Q Consensus 362 a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~F 441 (509)
+||+|+||++|+++. ++|.+++|++++|+.||||+.|+++.+++||||++|+||++|||+||.+ ..++||
T Consensus 300 a~i~E~LRl~p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~F 369 (426)
T 3rwl_A 300 TMVPEIIRWQTPLAH-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSF 369 (426)
T ss_dssp HHHHHHHHHHCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTT
T ss_pred HHHHHHHHhcCcccc-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC---------CCccCC
Confidence 999999999999997 7799999999999999999999999999999999999999999999942 358999
Q ss_pred cCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171 442 GAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY 504 (509)
Q Consensus 442 g~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (509)
|+|+|.|+|++||.+|++++++.|+++| ++++..+. + ...+........+.|+++|
T Consensus 370 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---~----~~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 370 GFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP---E----RVRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp CCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCC---E----ECCCSSBCCEEECEEEEEC
T ss_pred CCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCC---c----ccccccccCcceeeEEEeC
Confidence 9999999999999999999999999999 99986542 1 1122333444577777765
No 70
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=2.6e-57 Score=435.22 Aligned_cols=357 Identities=18% Similarity=0.251 Sum_probs=281.5
Q ss_pred CCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhh----ccccCCcceEecCCchhH
Q 038171 51 SSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQ----RLTYNGLDLIFSPYGEYW 126 (509)
Q Consensus 51 ~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~w 126 (509)
..+++.+ ++.++|||++++..|... ++|++++.++++++++...+..+....... .......+.+++.+|+.|
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 108 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADH 108 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHHH
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhcCccccCCchHH
Confidence 4567777 566689999999887666 999999999999987642221111000000 000001235667789999
Q ss_pred HHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhh
Q 038171 127 REIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRS 205 (509)
Q Consensus 127 ~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 205 (509)
+++||+ +.+.|+++.++.+.+.+++.++++++.+ . ++++|+...+ ..+++++|+. +||.+.. ..+
T Consensus 109 ~~~Rr~-~~~~fs~~~l~~~~~~i~~~~~~ll~~l-~----~g~~d~~~~~~~~~~~~vi~~-l~G~~~~-------~~~ 174 (416)
T 3p3o_A 109 RRLRGL-ATHPFTPRRITAVQPFVRSTVEQLIDKL-P----QGDFDFVQHFPHPLPALVMCQ-LLGFPLE-------DYD 174 (416)
T ss_dssp HHHHHT-TCGGGSHHHHHHHHHHHHHHHHHHHHTC-C----SSSEEHHHHTTTHHHHHHHHH-HHTCCGG-------GHH
T ss_pred HHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHhh-c----cCCccHHHHHHHHHHHHHHHH-HhCCCHH-------HHH
Confidence 999998 7899999999999999999999999988 3 3459965554 5699999998 5887543 122
Q ss_pred HHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHH
Q 038171 206 RFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRK 285 (509)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (509)
.+......+.. .+ ... ......++..++.+.+.+++.+++++++++. .+|+++.|+++..
T Consensus 175 ~~~~~~~~~~~---~~------~~~----~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~ll~~~~ 234 (416)
T 3p3o_A 175 TVGRLSIETNL---GL------ALS----NDQDILVKVEQGLGRMFDYLVAAIEKRKVEP-------GDDLTSDIVRAFH 234 (416)
T ss_dssp HHHHHHHTTCG---GG------TTC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHHH
T ss_pred HHHHHHHHHHh---hc------ccc----cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-------CccHHHHHHHhhc
Confidence 22222221111 10 000 0113345667788889999999998876542 1799999999876
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHH
Q 038171 286 HRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVK 365 (509)
Q Consensus 286 ~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~ 365 (509)
++ .++++++.++++.+++||+|||+++++|++++|++||++|++|++|++ |+++||+
T Consensus 235 ~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-------------------~l~a~i~ 291 (416)
T 3p3o_A 235 DG----VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-------------------LAPQAVE 291 (416)
T ss_dssp TT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-------------------GHHHHHH
T ss_pred cC----CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-------------------HHHHHHH
Confidence 53 699999999999999999999999999999999999999999999853 7999999
Q ss_pred hhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCC
Q 038171 366 ETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGR 445 (509)
Q Consensus 366 EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~ 445 (509)
|+||++|++|..++|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+||.+ ..++|||+|+
T Consensus 292 E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~---------~~~l~FG~G~ 362 (416)
T 3p3o_A 292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE---------APSIAFGGGP 362 (416)
T ss_dssp HHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS---------SCCCTTCCST
T ss_pred HHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC---------CCeecCCCCC
Confidence 9999999997778899999999999999999999999999999999999999999999732 3489999999
Q ss_pred CCCCChhHHHHHHHHHHHHhHhcce-eeCCCC
Q 038171 446 RICPGMHLGIATVDLALANLLYKFD-WEMPPG 476 (509)
Q Consensus 446 r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~ 476 (509)
|.|+|++||.+|++++++.|+++|+ +++..+
T Consensus 363 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 394 (416)
T 3p3o_A 363 HFCLGTALARLELTEAVAALATRLDPPQIAGE 394 (416)
T ss_dssp TSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC
T ss_pred ccCcCHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 9999999999999999999999995 777644
No 71
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=1.7e-56 Score=426.28 Aligned_cols=354 Identities=17% Similarity=0.223 Sum_probs=281.4
Q ss_pred CCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHHH
Q 038171 52 SKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRK 131 (509)
Q Consensus 52 ~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk 131 (509)
.+++..+.++++ +|||+++..| .++|++++.++++++++ .|+.++........ ..+.+.+++.+|+.|+++||
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~-~~~~~~l~~~dg~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPW-AVASDTALGSDPPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGG-GGGGGSGGGCCTTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccc-hhcccccccCCchHHHHHHH
Confidence 478888888866 5899987643 78999999999999754 24332211111111 11223456778999999999
Q ss_pred HHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHHHHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHH
Q 038171 132 ICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKTMSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLL 211 (509)
Q Consensus 132 ~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 211 (509)
. +.+.|+++.++.+.+.+++.++++++.+. .++++|+...+..+++++++..+||.+.+. ...+.+.+
T Consensus 93 ~-~~~~fs~~~~~~~~~~i~~~~~~l~~~~~----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-------~~~~~~~~ 160 (394)
T 2wiy_A 93 Q-TNKWFTPKLVDGWVRTTRELVGDLLDGVE----AGQVIEARRDLAVVPTHVTMARVLQLPEDD-------ADAVMEAM 160 (394)
T ss_dssp H-HHTTCSHHHHHHHTHHHHHHHHHHHHTCC----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCC-------HHHHHHHH
T ss_pred H-HHhccCHHHHHHHHHHHHHHHHHHHHHHh----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhH-------HHHHHHHH
Confidence 8 78999999999999999999999988774 356899999999999999999999986542 22233222
Q ss_pred HHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCCCC
Q 038171 212 SEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKV 291 (509)
Q Consensus 212 ~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ 291 (509)
... +.. ....|.. ...++..++...+.+++.+++++++.+. .+|+++.|+++..++
T Consensus 161 ~~~---~~~---~~~~p~~-------~~~~~~~~~~~~l~~~~~~~i~~rr~~~-------~~dll~~Ll~~~~~~---- 216 (394)
T 2wiy_A 161 FEA---MLM---QSAEPAD-------GDVDRAAVAFGYLSARVAEMLEDKRVNP-------GDGLADSLLDAARAG---- 216 (394)
T ss_dssp HHH---HGG---GSSSCCT-------THHHHHHHHHHHHHHHHHHHHHHHHHSC-------CSSHHHHHHHHHHTT----
T ss_pred HHH---HHh---ccCCccc-------hHHHHHHHHHHHHHHHHHHHHHHhhcCC-------CCcHHHHHHHhhhcC----
Confidence 111 111 1112221 1123344556677788888888775432 168999999876532
Q ss_pred CCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccC
Q 038171 292 DLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371 (509)
Q Consensus 292 ~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~ 371 (509)
.++++++.++++.+++||+|||+++++|++++|++||++|+++++|+ +|+++||+|+||++
T Consensus 217 ~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~-------------------~~l~a~i~E~LRl~ 277 (394)
T 2wiy_A 217 EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE-------------------SARAAIINEMVRMD 277 (394)
T ss_dssp SSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG-------------------GGHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh-------------------HhHHHHHHHHHhhC
Confidence 59999999999999999999999999999999999999999999874 47899999999999
Q ss_pred CCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCCh
Q 038171 372 PPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGM 451 (509)
Q Consensus 372 p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~ 451 (509)
|+++. ++|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+||++. ..++|||+|+|.|+|+
T Consensus 278 pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~ 348 (394)
T 2wiy_A 278 PPQLS-FLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQ 348 (394)
T ss_dssp CSBCE-EEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTH
T ss_pred CCccC-eeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcH
Confidence 99985 67999999999999999999999999999999999999999999999742 2489999999999999
Q ss_pred hHHHHHHHHHHHHhHhcce-eeCCCC
Q 038171 452 HLGIATVDLALANLLYKFD-WEMPPG 476 (509)
Q Consensus 452 ~~a~~~~~~~l~~ll~~~~-~~~~~~ 476 (509)
+||.+|++++++.|+++|+ +++.++
T Consensus 349 ~lA~~e~~~~l~~ll~~~~~~~l~~~ 374 (394)
T 2wiy_A 349 IISRAEATTVFAVLAERYERIELAEE 374 (394)
T ss_dssp HHHHHHHHHHHHHHHHHCSCEEESSC
T ss_pred HHHHHHHHHHHHHHHHhCCCceECCC
Confidence 9999999999999999998 888653
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=4.5e-57 Score=426.10 Aligned_cols=354 Identities=17% Similarity=0.192 Sum_probs=277.6
Q ss_pred chhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc-hh-hhh----ccccCC---cceEecCCchh
Q 038171 55 HVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA-SV-ATQ----RLTYNG---LDLIFSPYGEY 125 (509)
Q Consensus 55 ~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~-~~-~~~----~~~~~~---~~~~~~~~g~~ 125 (509)
+..+.+++ +||||+++. | .++|+||+.+++++.++ ..|..++. .. ... .....+ ...++..+|+.
T Consensus 2 ~~~~~~lr-~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 75 (367)
T 3b4x_A 2 YDWFKQMR-KESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPL 75 (367)
T ss_dssp HHHHHHHH-HHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTH
T ss_pred CHHHHHHH-HcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCchh
Confidence 45677774 799999988 3 89999999999999865 35665532 11 110 101112 13344557999
Q ss_pred HHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhh
Q 038171 126 WREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGR 204 (509)
Q Consensus 126 w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (509)
|+++||. +.+.|+++.++. +.+++.++++++.+. + ++|+...+ ..+++++|+. +||.+ +. .
T Consensus 76 h~~~R~~-~~~~fs~~~l~~--~~i~~~~~~l~~~l~-----g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~-------~ 137 (367)
T 3b4x_A 76 HDELRNL-TADAFNPSNLPV--DFVREVTVKLLSELD-----E-EFDVIESFAIPLPILVISK-MLGIN-PD-------V 137 (367)
T ss_dssp HHHHHHT-TGGGGSGGGSCH--HHHHHHHHHHHHTCC-----S-EEEHHHHTTTHHHHHHHHH-HHTCC-CC-------H
T ss_pred HHHHHHH-HHHhcCHhhhcc--hHHHHHHHHHHHhcc-----C-CcchHHHHHHhhHHHHHHH-HcCCC-Cc-------H
Confidence 9999998 788999999888 888999999988874 3 49999765 7999999999 79987 42 2
Q ss_pred hHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHH
Q 038171 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIR 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (509)
+.+......+...+. ..|.. . +.. ++.+.+.+++.+.+++++++. .+|+++.|+++
T Consensus 138 ~~~~~~~~~~~~~~~------~~p~~--~-------~~~-~~~~~~~~~~~~~i~~r~~~~-------~~dll~~ll~~- 193 (367)
T 3b4x_A 138 KKVKDWSDLVALRLG------RADEI--F-------SIG-RKYLELISFSKKELDSRKGKE-------IVDLTGKIANS- 193 (367)
T ss_dssp HHHHHHHHHHHTTTT------STTGG--G-------CCC-HHHHHHHHHHHHHHHHHTTTC-------CSSHHHHHHTS-
T ss_pred HHHHHHHHHHHhccC------CChhh--H-------HHH-HHHHHHHHHHHHHHHHHhcCC-------CCCHHHHHHhc-
Confidence 334444433322111 12211 0 112 456677888888888876532 17899999964
Q ss_pred HhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHH
Q 038171 285 KHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364 (509)
Q Consensus 285 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i 364 (509)
.++++++.+++..+++||+|||+++++|++++|++ |++|+++++|++ +|||
T Consensus 194 -------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~---------------------~a~i 244 (367)
T 3b4x_A 194 -------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA---------------------LKAV 244 (367)
T ss_dssp -------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS---------------------HHHH
T ss_pred -------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc---------------------hHHH
Confidence 58999999999999999999999999999999999 999999999852 8999
Q ss_pred HhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCC
Q 038171 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAG 444 (509)
Q Consensus 365 ~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G 444 (509)
+|+||++|++| .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||+||. ..++|||+|
T Consensus 245 ~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G 313 (367)
T 3b4x_A 245 EEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTP----------NPHLSFGSG 313 (367)
T ss_dssp HHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCS
T ss_pred HHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCC----------CCCcCCCCC
Confidence 99999999999 5789999999999999999999999999999999999999999999983 257999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171 445 RRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY 504 (509)
Q Consensus 445 ~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (509)
+|.|+|++||++|++++++.|+++| ++++.++ ++ ..+...+....+.|++++
T Consensus 314 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~----~~----~~~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 314 IHLCLGAPLARLEARIALEEFAKKFRVKEIVKK----EK----IDNEVLNGYRKLVVRVER 366 (367)
T ss_dssp TTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE----EE----CCCSSBCSEEEEEEEEEE
T ss_pred CccCccHHHHHHHHHHHHHHHHHhCCCceeCCc----cc----cccccccCcceEEEEecC
Confidence 9999999999999999999999999 6998653 22 123344455577777653
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=3.5e-57 Score=427.63 Aligned_cols=356 Identities=18% Similarity=0.273 Sum_probs=276.8
Q ss_pred chhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCc-----hhhhh--c--cccCCcceEecCCchh
Q 038171 55 HVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPA-----SVATQ--R--LTYNGLDLIFSPYGEY 125 (509)
Q Consensus 55 ~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~-----~~~~~--~--~~~~~~~~~~~~~g~~ 125 (509)
+..+.++ ++||||+++ | +.++|+||+.+++++.++ ..|..++. ..... . ........++..+|+.
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 75 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPL 75 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTH
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCChH
Confidence 4567777 489999987 4 589999999999999874 35766663 11010 1 1100113455568999
Q ss_pred HHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhh
Q 038171 126 WREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGR 204 (509)
Q Consensus 126 w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 204 (509)
|+++||. +.+.|++..++.+.+.+++.++++++.+ + .+ ++|+...+ ..+++++++.+ ||.+.+. .
T Consensus 76 h~~~R~~-~~~~f~~~~~~~~~~~i~~~~~~l~~~l-~---~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~-------~ 141 (368)
T 1io7_A 76 HDELRSM-SADIFSPQKLQTLETFIRETTRSLLDSI-D---PR-EDDIVKKLAVPLPIIVISKI-LGLPIED-------K 141 (368)
T ss_dssp HHHHHGG-GTTTTCHHHHHHHHHHHHHHHHHHHHTC-C---TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGG-------H
T ss_pred HHHHHHH-HHhhcCHHHHHHHHHHHHHHHHHHHHHh-h---cC-CccHHHHHHHHHHHHHHHHH-hCCCHHH-------H
Confidence 9999998 7899999999999999999999999998 3 23 79999876 78999999999 9986531 1
Q ss_pred hHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHH
Q 038171 205 SRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIR 284 (509)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~ 284 (509)
+.+..... .+.. .. ..|. ..++..++.+.+.+++.+.+ + +..|+++.|+++
T Consensus 142 ~~~~~~~~----~~~~--~~-~~p~---------~~~~~~~~~~~~~~~~~~~i-----~-------~~~d~l~~ll~~- 192 (368)
T 1io7_A 142 EKFKEWSD----LVAF--RL-GKPG---------EIFELGKKYLELIGYVKDHL-----N-------SGTEVVSRVVNS- 192 (368)
T ss_dssp HHHHHHGG----GCTT--SC-CCTT---------CHHHHHHHHHHHHHHHHHHT-----T-------SSCHHHHHHHTS-
T ss_pred HHHHHHHH----HHHh--cc-CChH---------HHHHHHHHHHHHHHHHHHHh-----C-------CCCCHHHHHHhc-
Confidence 22222111 1110 00 0121 11334455566666666666 1 117899999864
Q ss_pred HhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHH
Q 038171 285 KHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVV 364 (509)
Q Consensus 285 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i 364 (509)
.++++++.+++..+++||+|||+++++|++++|++|| +|+++++| + |++|||
T Consensus 193 -------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E--~------------------~l~a~i 244 (368)
T 1io7_A 193 -------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE--N------------------LYLKAI 244 (368)
T ss_dssp -------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH--T------------------CHHHHH
T ss_pred -------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc--c------------------hHHHHH
Confidence 5899999999999999999999999999999999999 99999998 2 689999
Q ss_pred HhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCC
Q 038171 365 KETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAG 444 (509)
Q Consensus 365 ~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G 444 (509)
+|+||++|+++ .++|.+++|++++||.||||+.|+++.+++||||++|+||++|||||| ...++|||+|
T Consensus 245 ~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~----------~~~~~~FG~G 313 (368)
T 1io7_A 245 EEALRYSPPVM-RTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRN----------PNPHLSFGSG 313 (368)
T ss_dssp HHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCC----------SCCCCTTCCG
T ss_pred HHHHHhCcccc-cCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCC----------CCCCcCCCCC
Confidence 99999999999 578999999999999999999999999999999999999999999994 1247999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhHhcce-eeCCCCCCCCcCCCCCCCCceeeeccceEEEEeecc
Q 038171 445 RRICPGMHLGIATVDLALANLLYKFD-WEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKYHE 506 (509)
Q Consensus 445 ~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (509)
+|.|+|++||.+|++++++.|+++|+ +++.+ . ++ ..+........+.|++++|+
T Consensus 314 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~---~~----~~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 314 IHLCLGAPLARLEARIAIEEFSKRFRHIEILD-T---EK----VPNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp GGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE-E---EE----CCCSSBCCEEEEEEEEEC--
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC-c---ee----ccCCcccCCceeEEEeccCC
Confidence 99999999999999999999999996 98754 1 11 12334455668999999884
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=6.2e-57 Score=421.64 Aligned_cols=320 Identities=18% Similarity=0.233 Sum_probs=255.4
Q ss_pred hhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHHHHHHHhhcchhh
Q 038171 63 KKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIR 142 (509)
Q Consensus 63 ~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~ 142 (509)
++||||+++ | .++|+||+.+++++.++ ..|..++...... ..+. .++..+|+.|+++||. +.+.|++..
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~---~~~~-~l~~~~g~~~~~~R~~-~~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN---AGGI-SFITMDNPEHKEFRDI-SAPYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CC-GGGGCCHHHHHHHHHH-HHHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC---cccc-ccccCCchHHHHHHHH-hhhhcCHHH
Confidence 589999986 3 99999999999999875 3566665211111 1233 3445689999999998 689999999
Q ss_pred hhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhh
Q 038171 143 AQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAF 221 (509)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (509)
++.+.+.++++++++++.+. ++|+...+ ..+++++++.+ ||.+.+ ..+.+.+....+...
T Consensus 71 l~~~~~~i~~~~~~l~~~l~-------~~d~~~~~~~~~~~~vi~~~-~G~~~~-------~~~~~~~~~~~~~~~---- 131 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID-------NKDIISEYAVRLPVNIISKI-LGIPDS-------DMPLFKLWSDYIIGN---- 131 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT-------TSCHHHHTTTHHHHHHHHHH-HTCCGG-------GHHHHHHHHHHHHTS----
T ss_pred HHHHHHHHHHHHHHHHHhcc-------ccCHHHHHhhhhhHHHHHHH-cCCCHH-------HHHHHHHHHHHHhhc----
Confidence 99999999999999998774 79998865 89999999998 998653 223344333322211
Q ss_pred ccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHH
Q 038171 222 FVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAV 301 (509)
Q Consensus 222 ~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~ 301 (509)
..|.+. ..++. ++.+.+.+++.+++ . +| ++.|+++..+ +..++++++.++
T Consensus 132 ----~~p~~~-------~~~~~-~~~~~~~~~~~~~i-------------~-~d-l~~ll~~~~~---~~~l~~~ei~~~ 181 (343)
T 2rfb_A 132 ----KRDENF-------NYVNN-RMVSRLLEIFKSDS-------------H-GI-INVLAGSSLK---NRKLTMDEKIKY 181 (343)
T ss_dssp ----CCSSHH-------HHHHH-HHHHHHHHHHHSCC-------------S-SH-HHHHHTCBCS---SSBCCHHHHHHH
T ss_pred ----cCcchh-------hHHHH-HHHHHHHHHHHHHH-------------h-cc-HHHHHhhhcC---CCCCCHHHHHHH
Confidence 113221 11222 44444444444333 1 67 8888865322 236999999999
Q ss_pred HHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccCCCC-cccccc
Q 038171 302 LMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPA-PLLVPR 380 (509)
Q Consensus 302 ~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~-~~~~~R 380 (509)
+..+++||+|||+++++|++++|++||++|+++++|+ +|||+|+||++|++ | .++|
T Consensus 182 ~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------------~a~i~E~lRl~p~~~~-~~~R 238 (343)
T 2rfb_A 182 IMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR----------------------SGFVEETLRYYSPIQF-LPHR 238 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH----------------------HHHHHHHHHHSCSBCC-BCCC
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc----------------------HHHHHHHHhhCccccc-ccce
Confidence 9999999999999999999999999999999999985 89999999999999 8 5789
Q ss_pred cccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHH
Q 038171 381 ETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDL 460 (509)
Q Consensus 381 ~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~ 460 (509)
.+++|++++||.||||+.|+++.+++||||++|+||++|+|||| ..++|||+|+|.|+|++||++|+++
T Consensus 239 ~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~-----------~~~~~FG~G~r~C~G~~lA~~e~~~ 307 (343)
T 2rfb_A 239 FAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR-----------EMHLAFGIGIHMCLGAPLARLEASI 307 (343)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS-----------SCCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred EECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC-----------CCCccCCCCCccCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 1479999999999999999999999
Q ss_pred HHHHhHhcce-eeCCCC
Q 038171 461 ALANLLYKFD-WEMPPG 476 (509)
Q Consensus 461 ~l~~ll~~~~-~~~~~~ 476 (509)
+++.|+++|+ +++.++
T Consensus 308 ~la~ll~~f~~~~~~~~ 324 (343)
T 2rfb_A 308 ALNDILNHFKRIKIDYK 324 (343)
T ss_dssp HHHHHHHHCSCCCBCTT
T ss_pred HHHHHHHhCCCceeCCC
Confidence 9999999997 998763
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=1.5e-54 Score=414.73 Aligned_cols=386 Identities=14% Similarity=0.189 Sum_probs=279.9
Q ss_pred CCCcccccc---cCCCCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh---hhhccc
Q 038171 38 KGLPFIGNL---HQFDSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV---ATQRLT 111 (509)
Q Consensus 38 ~~~p~~G~~---~~~~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~---~~~~~~ 111 (509)
.++|.+|-- ..+ ..||+..+.++++ +|||+++ ++.++++|++++.+++++.++.. |+...... ......
T Consensus 18 ~~~P~~~~dp~~~~~-~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~~-fs~~~~~~~~~~~~~~~ 92 (412)
T 4dnj_A 18 AGVPHLGIDPFALDY-FADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDPLT-FCSSRGVGLSDFKKEKP 92 (412)
T ss_dssp TTSCEECCCTTSHHH-HHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCTTT-EESTTCSSSSCTTTSCC
T ss_pred CCCCccCCCCCCHHH-HhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCCcc-ccCCCcccccccccccc
Confidence 457766621 122 4578888888764 7999754 56678999999999999976543 33221111 111111
Q ss_pred cCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccch-HHHHHHhHHHHHHHHHh
Q 038171 112 YNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNL-SEKTMSLSCNTICRLAF 190 (509)
Q Consensus 112 ~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~-~~~~~~~~~~vi~~~~f 190 (509)
..+.+.++..||+.|+++||+ +++.|+++.++.+.+.+.+.++++++.+.. .++++|+ .++...+..++++.+.
T Consensus 93 ~~~~~~~~~~Dg~~H~r~R~~-~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~---~~~~~D~v~~~~~~~~~~~i~~l~- 167 (412)
T 4dnj_A 93 WRPPSLILEADPPAHTRTRAV-LSKVLSPATMKRLRDGFAAAADAKIDELLA---RGGNIDAIADLAEAYPLSVFPDAM- 167 (412)
T ss_dssp SSCCCTTTTCCTTHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHHH---TTSEEETCCCCCCHHHHHHHHHHH-
T ss_pred ccCCCccccCChHHHHHHHhh-cccccCHHHHHHhhHHHHHHHHHHHHhhhc---cCCCceeHHHHHhhhhHhHHHHHc-
Confidence 223445667789999999998 799999999999999999999999998865 3456664 5566778888888764
Q ss_pred cCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccc
Q 038171 191 GKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKAD 270 (509)
Q Consensus 191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 270 (509)
|..... ...+......+...... .. .............. ..+.+..+..+..
T Consensus 168 g~~~~~-------~~~~~~~~~~~~~~~~~------~~---------~~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 219 (412)
T 4dnj_A 168 GLKQEG-------RENLLPYAGLVFNAFGP------PN---------ELRQSAIERSAPHQ----AYVAEQCQRPNLA-- 219 (412)
T ss_dssp TCCSTT-------GGGHHHHHHHHHHHTSC------SS---------HHHHHHHHTCHHHH----HHHHHHTSGGGSC--
T ss_pred CCchhh-------hhhhhhhhhcccccccc------cH---------HHHHHHHHHHHHHH----HHHHHHHHhhccc--
Confidence 443332 11222222222211110 00 01111111111222 2222222222111
Q ss_pred cCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCC
Q 038171 271 MQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVD 350 (509)
Q Consensus 271 ~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~ 350 (509)
.|.+..++....++ ..++++++.+++..+++||+|||+++++|++++|++||++|++|++|
T Consensus 220 ---~~~~~~l~~~~~~~---~~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~------------- 280 (412)
T 4dnj_A 220 ---PGGFGACIHAFSDT---GEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD------------- 280 (412)
T ss_dssp ---TTSHHHHHHHTTTT---TSSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC-------------
T ss_pred ---cccchhhhHhhhhc---cchhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC-------------
Confidence 44555666554443 37999999999999999999999999999999999999999999975
Q ss_pred hhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCC
Q 038171 351 EDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVD 430 (509)
Q Consensus 351 ~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~ 430 (509)
..++.++++|++|++|+++. ++|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+||.
T Consensus 281 ------~~~~~~~~eE~lR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~----- 348 (412)
T 4dnj_A 281 ------PSLARNAFEEAVRFESPVQT-FFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT----- 348 (412)
T ss_dssp ------GGGHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC-----
T ss_pred ------ccccccccceeeeecCCccc-ccccCCCCeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC-----
Confidence 35789999999999999997 679999999999999999999999999999999999999999999973
Q ss_pred CCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCCCCCCcCCCCCCCCceeeeccceEEEEee
Q 038171 431 FKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPGMKKQDLDFDSLSGITVHKKNFLVLLAKY 504 (509)
Q Consensus 431 ~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (509)
..++|||+|+|.|+|++||++|++++++.|+++| ++++..+. ....+.+.++...+.|+++|
T Consensus 349 -----~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~~~~-------~~~~~~~~rg~~~LpV~~tP 411 (412)
T 4dnj_A 349 -----SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIAGPL-------KRRFNNTLRGLESLPIQLTP 411 (412)
T ss_dssp -----TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEECSCC-------EEEECSSBEEEEECEEEEEE
T ss_pred -----CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeECCCC-------eeecCCCccCCcceeEEEEe
Confidence 3479999999999999999999999999999999 88886532 22344556666789999887
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=1.6e-49 Score=378.80 Aligned_cols=355 Identities=15% Similarity=0.174 Sum_probs=263.1
Q ss_pred CCCchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchhhhhccccCCcceEecCCchhHHHHH
Q 038171 52 SKPHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASVATQRLTYNGLDLIFSPYGEYWREIR 130 (509)
Q Consensus 52 ~~~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 130 (509)
.+++..+.+++++.+ +++..- .+....+|+.++.+++++++.. .|+......... ....+...+...|++.|+++|
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~-~~gg~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~R 113 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTP-FTGGHWIATNGDTVKEVYSDPT-RFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPYR 113 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEES-STTSEEEECSHHHHHHHHTCTT-TEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecC-CCCCEEEECCHHHHHHHHcCch-hccCCCcccccc-cccccccCcccCCcHHHHHHH
Confidence 456666777766544 344332 2346788999999999997643 344332211111 111123345566899999999
Q ss_pred HHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HHhHHHHHHHHHhcCCCCCCccchhhhhHHHH
Q 038171 131 KICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MSLSCNTICRLAFGKRSDGNEEAISGRSRFHT 209 (509)
Q Consensus 131 k~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~ 209 (509)
|+ +++.|+++.++.+.+.+++.++++++.+.. ++++|+...+ ..+...+++. ++|.... ....+.+
T Consensus 114 rl-l~~~Fs~~~l~~~~~~i~~~~~~lld~l~~----~g~~D~v~~~a~~l~~~vi~~-llg~~~~-------d~~~~~~ 180 (417)
T 4dxy_A 114 KA-LDKGLNLAKIRKVEDKVREVASSLIDSFAA----RGECDFAAEYAELFPVHVFMA-LADLPLE-------DIPVLSE 180 (417)
T ss_dssp HH-HHHHHCHHHHHTTHHHHHHHHHHHHHHHHT----TSEEEHHHHTTTTHHHHHHHH-HTTCCGG-------GHHHHHH
T ss_pred HH-hhhhcCHHHHHHHHHHHHHHHHHHHHHhhh----cCCeeeHHHHHhhhHHHHHHH-HcCCCHH-------HHHHHHh
Confidence 98 799999999999999999999999998864 4578876555 4455666665 4676432 2223332
Q ss_pred HHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCccccccccCcchHHHHHHHHHHhcCC
Q 038171 210 LLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELIDEHLDPKRTKADMQQEDLVDVLLQIRKHRGF 289 (509)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 289 (509)
....+.. .....| .........+...+.+++.+++++++++.. +|+++.|+.+..++
T Consensus 181 ~~~~~~~------~~~~~~--------~~~~~~~~~~~~~~~~~~~~li~~rr~~~~-------ddl~s~L~~~~~~~-- 237 (417)
T 4dxy_A 181 YARQMTR------PEGNTP--------EEMATDLEAGNNGFYAYVDPIIRARVGGDG-------DDLITLMVNSEING-- 237 (417)
T ss_dssp HHHHHHS------CCCSSH--------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCC-------CSHHHHHHTCEETT--
T ss_pred hhhhhcc------ccccCh--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-------cchhhhhccccccC--
Confidence 2222211 000111 123345566777888888898888765432 78999998765443
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhc
Q 038171 290 KVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMR 369 (509)
Q Consensus 290 ~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlR 369 (509)
..++++++.+++..+++||+|||+++++|++++|++||++|+++++|...+ ....|.+|
T Consensus 238 -~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~--------------------~~avee~~ 296 (417)
T 4dxy_A 238 -ERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL--------------------MRGAEEMF 296 (417)
T ss_dssp -EECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH--------------------HHTHHHHH
T ss_pred -CccchhHHHHHHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc--------------------ccceeeee
Confidence 378999999999999999999999999999999999999999999985543 22234444
Q ss_pred cCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCCCCCcCCCCCCCCCCCCceeecccCCCCCCC
Q 038171 370 LQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEFNPERFIDRSVDFKGKNFEFIPFGAGRRICP 449 (509)
Q Consensus 370 l~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 449 (509)
++++++. .+|.+++|++++|+.||+|+.|+++.+++||||++|+||++|||+|+ +..++|||+|+|.|+
T Consensus 297 ~~~~~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~Cl 365 (417)
T 4dxy_A 297 RRFPVVS-EARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCA 365 (417)
T ss_dssp HHSCCBE-EEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCT
T ss_pred ccccccc-cccccccceEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCc
Confidence 4555554 56999999999999999999999999999999999999999999993 345899999999999
Q ss_pred ChhHHHHHHHHHHHHhHhcc-eeeCCCCC
Q 038171 450 GMHLGIATVDLALANLLYKF-DWEMPPGM 477 (509)
Q Consensus 450 G~~~a~~~~~~~l~~ll~~~-~~~~~~~~ 477 (509)
|++||++|++++++.||++| ++++.++.
T Consensus 366 G~~LA~~E~~i~l~~Ll~rfp~~~l~~~~ 394 (417)
T 4dxy_A 366 GMHLARMEVIVTLEEWLKRIPEFSFKEGE 394 (417)
T ss_dssp THHHHHHHHHHHHHHHHHHCSSCEECTTC
T ss_pred cHHHHHHHHHHHHHHHHHhCCCceeCCCC
Confidence 99999999999999999999 89987653
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=8.5e-48 Score=358.24 Aligned_cols=313 Identities=15% Similarity=0.153 Sum_probs=215.5
Q ss_pred CCCC-CCCCcccccccCC----CCCCCchhHHHHHhhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCchh--
Q 038171 33 LPPG-PKGLPFIGNLHQF----DSSKPHVSFWELSKKYGPLMSLRIGFVPTLIVSSAKMAKETLKAHDLQFSGRPASV-- 105 (509)
Q Consensus 33 ~ppg-p~~~p~~G~~~~~----~~~~~~~~~~~~~~kyG~v~~i~~~~~~~vvv~dp~~~~~i~~~~~~~~~~~~~~~-- 105 (509)
.||| ++++|++|+...+ ...+++..+.+++++ ||+++. .+.++|++++.+++++.++ .|...+...
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4566 4468999976442 256889999999876 998765 4689999999999999863 355442210
Q ss_pred hh-----hccccCCcceEecCCchhHHHHHHHHHHhhcchhhhhccccchHHHHHHHHHHHHHhhccCCccchHHHH-HH
Q 038171 106 AT-----QRLTYNGLDLIFSPYGEYWREIRKICVVHLFNSIRAQNFRPIREDEVSRMIESISKSAAASKQVNLSEKT-MS 179 (509)
Q Consensus 106 ~~-----~~~~~~~~~~~~~~~g~~w~~~Rk~~~~~~f~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~-~~ 179 (509)
.. ..... +. .++..+|+.| .+.|+ . .+.+++.++++++.+. +++|+...+ ..
T Consensus 108 ~~~~~~~~~~~~-~~-~l~~~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~------g~~Dl~~~~a~~ 165 (381)
T 2yjn_B 108 WMRAAGAPPAEW-AQ-PFRDVHAASW--------EGEVP-----D-VGELAESFAGLLPGAG------ARLDLVGDFAWQ 165 (381)
T ss_dssp HHHHHTCCHHHH-TH-HHHHHHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC------------CCCCCCTH
T ss_pred cccccccccchh-hh-hhhhCCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc------CcchHHHHHHHH
Confidence 00 00001 22 2344568888 45666 3 7889999999998875 368988665 69
Q ss_pred hHHHHHHHHHhcCCCCCCccchhhhhHHHHHHHHHHHhhhhhccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 038171 180 LSCNTICRLAFGKRSDGNEEAISGRSRFHTLLSEIQALSIAFFVTDYSPFMGWIDKLTGMMRRLENNVQESDRFYQELID 259 (509)
Q Consensus 180 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 259 (509)
+++++|+.+ ||.+.+. . .+ ...+..... .. ..| ...++.
T Consensus 166 l~~~vi~~l-~G~~~~~------~--~~---~~~~~~~~~---~~-~~~---------~~~~~~---------------- 204 (381)
T 2yjn_B 166 VPVQGMTAV-LGAAGVL------R--GA---AWDARVSLD---AQ-LSP---------QQLAVT---------------- 204 (381)
T ss_dssp HHHHHHHTC------CC------H--HH---HHHHTTHHH---HT-TSC---------CCHHHH----------------
T ss_pred HHHHHHHHH-cCCCHHH------H--HH---HHHHHHhcc---CC-CCH---------HHHHHH----------------
Confidence 999999995 9987653 1 11 111110000 00 000 000000
Q ss_pred hhcCccccccccCcchHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCchHhHHHHHHHHHhhChHHHHHHHHHHH
Q 038171 260 EHLDPKRTKADMQQEDLVDVLLQIRKHRGFKVDLTLDHIKAVLMNIFVAGTDTSAATLVWTMTYLMKHPRVMKKVQEEIR 339 (509)
Q Consensus 260 ~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~p~~q~~l~~Ei~ 339 (509)
.+.++. +.+ ++++.+++||+|||+++++|++++|++||++|++|++|++
T Consensus 205 --------------~~~~~~-------------l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~ 253 (381)
T 2yjn_B 205 --------------EAAVAA-------------LPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA 253 (381)
T ss_dssp --------------HHHHHH-------------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC
T ss_pred --------------HHHHHH-------------HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH
Confidence 000000 111 6788999999999999999999999999999999998742
Q ss_pred HhhCCCCCCCChhhhccchhHHHHHHhhhccCCCCcccccccccCCccccCceeCCCCEEEeehhhhcCCCCCCCCCCCC
Q 038171 340 SLVGGNKSFVDEDDVQELHYLKAVVKETMRLQPPAPLLVPRETTEKSIIDGYEIPAKTLVYVNAWAIGRDPEAWENPEEF 419 (509)
Q Consensus 340 ~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~~~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F 419 (509)
|+++||+|+||++|+++. ++|.+++|++++|+.||+|+.|+++.+++||||++|+||++|
T Consensus 254 -------------------~l~~~i~E~LR~~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F 313 (381)
T 2yjn_B 254 -------------------AAQRTVAEVLRLHPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRL 313 (381)
T ss_dssp ---------------------HHHHHHHHHHSCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSC
T ss_pred -------------------HHHHHhCeeeeecCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCcccc
Confidence 899999999999999997 679999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCCceeecccCCCCCCCChhHHHHHHHHHHHHhHhcc-eeeCCCC
Q 038171 420 NPERFIDRSVDFKGKNFEFIPFGAGRRICPGMHLGIATVDLALANLLYKF-DWEMPPG 476 (509)
Q Consensus 420 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~-~~~~~~~ 476 (509)
||+||++ ..+++||+| |.|+|++||.+|++++++.|+++| ++++.++
T Consensus 314 ~p~R~~~---------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~ 361 (381)
T 2yjn_B 314 DVDRPDA---------DRALSAHRG-HPGRLEELVTALATAALRAAAKALPGLTPSGP 361 (381)
T ss_dssp CSSCSCC---------CCCCC-----CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred CCCCCCC---------CCccCCCCC-CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence 9999974 358999999 999999999999999999999999 9998664
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=62.06 E-value=23 Score=25.13 Aligned_cols=51 Identities=12% Similarity=0.105 Sum_probs=37.2
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- -....+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 13 ~lfV~~Lp~~---~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 13 SVYIKGFPTD---ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp CEEEECCCTT---CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEEECCCCC---CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 3456776532 3456688899999999887753 3457888899999998874
No 79
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=61.16 E-value=40 Score=24.18 Aligned_cols=58 Identities=24% Similarity=0.417 Sum_probs=42.1
Q ss_pred CCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec------CccEEEecCHHHHHHHHHh
Q 038171 33 LPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 33 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~------~~~~vvv~dp~~~~~i~~~ 93 (509)
.||.|...-++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 3 ~~~~~~~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 66 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK---ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDH 66 (115)
T ss_dssp CCTTCCSEEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHH
Confidence 45556666688887532 3456688999999999888762 3457888899988888763
No 80
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=60.59 E-value=17 Score=24.83 Aligned_cols=53 Identities=13% Similarity=0.154 Sum_probs=37.5
Q ss_pred CCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec----CccEEEecCHHHHHHH
Q 038171 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG----FVPTLIVSSAKMAKET 90 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~----~~~~vvv~dp~~~~~i 90 (509)
+.|...-++|++..- -....++++..+||+|..+.+. |..+|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~~---~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTED---MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCTT---CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCC---CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 344455677887542 3456788999999999988875 4568888899988853
No 81
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=55.27 E-value=25 Score=23.31 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=35.8
Q ss_pred ccccccCCCCCC----CchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSK----PHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~----~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~ 93 (509)
++||+..- ..+ ....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 5 ~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCC-CTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCC-cHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 46666532 222 336678888999999888764 3457788899988888763
No 82
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.38 E-value=25 Score=24.59 Aligned_cols=52 Identities=21% Similarity=0.246 Sum_probs=37.7
Q ss_pred cccccccCCCCCC-CchhHHHHHhhhC-CeEEEeecCccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSK-PHVSFWELSKKYG-PLMSLRIGFVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~-~~~~~~~~~~kyG-~v~~i~~~~~~~vvv~dp~~~~~i~~~ 93 (509)
-+++|+..-...+ ....++++..+|| +|..+ .+|+-+|...+.+.+...+..
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 4588886531111 1223678889995 99888 568999999999999888863
No 83
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=51.52 E-value=69 Score=23.66 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=39.3
Q ss_pred CCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
|.|...-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 43 ~~~~~~l~V~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 43 PDPNCCLGVFGLSLY---TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CCCSSCBCEETCTTS---CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 334445567777532 3456688999999999887763 2347778899999988874
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=51.37 E-value=24 Score=22.77 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=31.2
Q ss_pred CchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHhC
Q 038171 54 PHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKAH 94 (509)
Q Consensus 54 ~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~~ 94 (509)
....+.++.++||+|..+.+. |.-+|-..+++.++..+...
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 456688888999998877652 23477788999999888753
No 85
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=48.53 E-value=57 Score=22.16 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=39.2
Q ss_pred CCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
|.|...-++|++..- -....+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~~~~~~l~v~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 12 PDPNCCLGVFGLSLY---TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CCGGGCEEEESCCSS---CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCC---CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 444445577877543 3456688999999998877653 1346777899999888864
No 86
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=45.84 E-value=59 Score=23.15 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=39.7
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHH
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~ 92 (509)
|...-++||+..- -....++++..+||.|..+.+. |.-+|-..+++.+.....
T Consensus 15 ~~~~LfV~nLp~~---vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 15 PSRVIHIRKLPID---VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCEEEECSCCTT---SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4445677888642 2456688999999999888764 456888889998888876
No 87
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=45.15 E-value=60 Score=23.33 Aligned_cols=51 Identities=4% Similarity=-0.063 Sum_probs=38.1
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+..- -....+.++.++||+|..+.+. +.-+|...+++.++..+..
T Consensus 18 ~l~V~nLp~~---~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 18 RVVVSGLPPS---GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp CEEEEECCSS---CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 3467777633 2356688999999999888764 4667888899999888863
No 88
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=44.68 E-value=69 Score=21.99 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=35.6
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHH
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~ 92 (509)
.|-++||+.. .-....++++..+||+|..+++. |--+|-..+++.+....+
T Consensus 8 ~wL~VgNL~~---~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 8 SWLLLKNLTA---QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp CEEEEECCCT---TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred ceEEEeCCCc---cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 4567788753 23457799999999999888753 234666777766666654
No 89
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=43.99 E-value=39 Score=21.73 Aligned_cols=40 Identities=5% Similarity=-0.001 Sum_probs=29.7
Q ss_pred CchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 54 PHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 54 ~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 456688889999998877653 2346777899998888753
No 90
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=41.47 E-value=65 Score=22.59 Aligned_cols=54 Identities=15% Similarity=0.099 Sum_probs=38.6
Q ss_pred CCcccccccCCCCCC----CchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSK----PHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~----~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~ 93 (509)
..-++||+..- ..+ ....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 16 ~~l~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 16 SVIVVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp SEEEEESCCCC-CTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred CEEEEeCCCcc-hhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 34577888643 222 346688889999999888765 4457778888888888764
No 91
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.94 E-value=79 Score=22.16 Aligned_cols=53 Identities=13% Similarity=0.158 Sum_probs=38.7
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHH
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~ 92 (509)
|...-++||+.. .-....+.++.++||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 14 p~~~l~V~nLp~---~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 14 PSRVLHIRKLPG---EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp CCSEEEEESCCT---TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 444567788863 22456688888999999888764 456888889998888776
No 92
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.45 E-value=83 Score=21.81 Aligned_cols=58 Identities=12% Similarity=0.062 Sum_probs=40.3
Q ss_pred CCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHh
Q 038171 33 LPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 33 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~ 93 (509)
..+.+..--++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 10 ~~~~~~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 10 ITRYQVVNLYVKNLDDG---IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp CCCSSCCCEEEECCCTT---CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred cCCCCCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 33444555677887542 2356688888899998877654 2357788899999988873
No 93
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=38.16 E-value=67 Score=23.06 Aligned_cols=50 Identities=14% Similarity=0.240 Sum_probs=36.9
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~ 93 (509)
-++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 8 lfV~nLp~~---~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS---IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC---CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 466777532 3456788999999999877653 2358888899999988864
No 94
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.12 E-value=1e+02 Score=21.63 Aligned_cols=51 Identities=6% Similarity=-0.031 Sum_probs=38.5
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+.. .-....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~l~V~nLp~---~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPP---SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCS---SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 346677753 23466788999999999887764 5678888899999988874
No 95
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=37.02 E-value=83 Score=24.61 Aligned_cols=49 Identities=14% Similarity=0.177 Sum_probs=36.1
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec-----CccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-----FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-----~~~~vvv~dp~~~~~i~~~ 93 (509)
++||+.. .-....++++..+||.|-++.+. +.-+|-..|++.++.....
T Consensus 50 ~VgNL~~---~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY---PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS---CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC---CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 4677743 23456788999999999887763 2467888899988888764
No 96
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.94 E-value=74 Score=22.42 Aligned_cols=56 Identities=9% Similarity=0.103 Sum_probs=40.3
Q ss_pred CCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHH
Q 038171 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~ 92 (509)
+.|...-++||+..- .-....+.++..+||.|..+++. +.-+|-..+++.+.....
T Consensus 12 ~~p~~~l~V~nLp~~--~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 12 VETRRVVHIMDFQRG--KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCCEEEEESCCCS--SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC--cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 345555678888641 22345678888999999888865 356888889998888876
No 97
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.89 E-value=1e+02 Score=21.28 Aligned_cols=54 Identities=7% Similarity=0.046 Sum_probs=38.3
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~ 93 (509)
+..--++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 14 ~~~~l~V~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 14 TPKRLHVSNIPFR---FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp CCCEEEEESCCTT---CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 3344567777532 3456688899999999887763 3457778899999888863
No 98
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=36.41 E-value=76 Score=22.01 Aligned_cols=50 Identities=16% Similarity=0.065 Sum_probs=35.4
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec-----C----ccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-----F----VPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-----~----~~~vvv~dp~~~~~i~~~ 93 (509)
-++||+..- -....+.++..+||+|..+.+. + .-+|-..+++.++..+..
T Consensus 22 lfV~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN---MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 366777532 3456788999999999877652 1 236778899988888764
No 99
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.40 E-value=97 Score=20.87 Aligned_cols=54 Identities=20% Similarity=0.308 Sum_probs=38.5
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
+...-++|++.. .-....+.++.++||+|..+.+. +.-+|-..+++.++..+..
T Consensus 15 ~~~~l~V~nlp~---~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 15 SKSTVYVSNLPF---SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp CTTSEEEESCCT---TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCC---CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 344556787753 23456688889999999887763 2347888899998888863
No 100
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.00 E-value=56 Score=21.62 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=35.4
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHH
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~ 92 (509)
|...-++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 4 ~~~~l~v~nlp~~---~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 4 GSSGLYIRGLQPG---TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CCCEEEEESCCTT---CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred CCcEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3344567777532 3355677888899999877642 234677788888887775
No 101
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=35.43 E-value=81 Score=22.47 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=37.8
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
.--++||+..- -....+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 7 ~~lfV~nL~~~---~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 7 KEVTFARLNDN---VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp CEEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred cEEEEECCCCC---CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34467877532 3466788999999999887752 2247888899999988864
No 102
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=35.14 E-value=1.2e+02 Score=21.36 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=40.2
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
|...-++||+..- -....+.++..+||.|..+.+. |..+|-..+.+.++.....
T Consensus 20 ps~~l~V~NLp~~---~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 20 ASPVVHIRGLIDG---VVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp CCSEEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC---CCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 4556788888642 3456689999999999877753 5678888899988888763
No 103
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.81 E-value=1.1e+02 Score=20.91 Aligned_cols=52 Identities=6% Similarity=0.082 Sum_probs=37.8
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
+..--++||+ . -....+.++..+||+|..+.++ +.-+|-..+++.+...+..
T Consensus 14 ~~~~l~V~n~-~----~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 14 KGNTLYVYGE-D----MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp CCSEEEEECS-S----CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEcCC-C----CCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3334467773 2 2456688999999999888875 3457778899999888864
No 104
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=34.64 E-value=1e+02 Score=21.17 Aligned_cols=55 Identities=15% Similarity=0.105 Sum_probs=36.5
Q ss_pred CCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEE--------Eeec---------CccEEEecCHHHHHHHHH
Q 038171 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMS--------LRIG---------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~--------i~~~---------~~~~vvv~dp~~~~~i~~ 92 (509)
|.|...-++||+..- -....++++..+||.|.. +.+. |.-+|...+++.++..+.
T Consensus 10 ~~~~~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 10 HSDNNTIFVQGLGEN---VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp CCCCSEEEEECCCSS---CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC---CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 334445567777532 345668899999998866 4432 134677788888888876
No 105
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=34.61 E-value=1e+02 Score=21.62 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=36.6
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
-++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 29 l~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHE---EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCT---TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 46677653 23456688999999999888763 3457788899999888863
No 106
>1jdm_A Sarcolipin; helix, membrane protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=34.60 E-value=48 Score=16.84 Aligned_cols=18 Identities=17% Similarity=0.515 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 038171 6 VMIILLCLPIFLFFVLRR 23 (509)
Q Consensus 6 ~~~~~l~~~~~~~~~~~~ 23 (509)
+-.+++++++++.+++.+
T Consensus 10 ~NFt~vLI~vlLi~llVr 27 (31)
T 1jdm_A 10 LNFTIVLITVILMWLLVR 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344566666666666543
No 107
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.56 E-value=1e+02 Score=21.92 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=36.4
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
-++||+.. .-....++++..+||+|..+.+. +.-+|...+++.++..+..
T Consensus 13 l~V~nLp~---~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 13 ILAKNLPA---GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp EEEESCCT---TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 35666643 23456688999999999888763 3467888899988888763
No 108
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.34 E-value=1.1e+02 Score=21.06 Aligned_cols=56 Identities=18% Similarity=0.160 Sum_probs=39.5
Q ss_pred CCCCCCcccccccCCCCCCCchhHHHHHhh-hCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 35 PGPKGLPFIGNLHQFDSSKPHVSFWELSKK-YGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~k-yG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
+.|..--++||+..- -....+.++..+ ||+|..+.+. |.-+|-..+++.+...+..
T Consensus 6 ~~~~~~l~V~nLp~~---~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPD---VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCTT---CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC---CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 344445577887643 345668888888 9998877652 2357788899999998874
No 109
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.18 E-value=98 Score=22.59 Aligned_cols=53 Identities=13% Similarity=0.117 Sum_probs=38.7
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHH
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~ 92 (509)
|...-++||+..- -....+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 30 ps~~LfVgNLp~~---vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 30 PSRVIHIRKLPID---VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp CCSEEEEESCCTT---CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3445577887642 3456688999999998877754 456788889888888775
No 110
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.86 E-value=1.1e+02 Score=20.89 Aligned_cols=53 Identities=19% Similarity=0.137 Sum_probs=37.8
Q ss_pred CCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 38 KGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 38 ~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
...-++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~~~l~v~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 17 KHKLFISGLPFS---CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CSCEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 334566777532 3456688999999998877753 3457888899999888854
No 111
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=32.91 E-value=80 Score=23.53 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=37.9
Q ss_pred CCCCCCCC--cccccccCCCCCCCchhHHHHHhhhCCeEEEeecC-----ccEEEecCHHHHHHHHHh
Q 038171 33 LPPGPKGL--PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGF-----VPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 33 ~ppgp~~~--p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~-----~~~vvv~dp~~~~~i~~~ 93 (509)
.+++|... -++||+.. .-....++++..+||.|.++.+.. +-+|...|++.++.....
T Consensus 21 ~~~~ps~VL~I~V~NL~~---~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 21 AMAGQSPVLRIIVENLFY---PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp ----CCSEEEEEEESCCS---CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred ccCCCCceEEEEECCCCC---CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 33444443 34888853 234566899999999988777532 367888898888877653
No 112
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.46 E-value=1.2e+02 Score=20.74 Aligned_cols=51 Identities=20% Similarity=0.179 Sum_probs=36.9
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 10 RLFVRNLSYT---SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEEECCCTT---CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 3456776532 3456688999999999888763 2357888899999988854
No 113
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=32.45 E-value=95 Score=21.59 Aligned_cols=50 Identities=12% Similarity=0.223 Sum_probs=36.0
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 26 l~V~nlp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 466776532 3456688999999999887763 2346778899998888863
No 114
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=31.87 E-value=1.2e+02 Score=20.36 Aligned_cols=51 Identities=14% Similarity=0.090 Sum_probs=36.3
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+.. .-....++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 10 ~l~V~nlp~---~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 10 QIFVRNLPF---DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEEECSCCT---TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 346677753 23456788999999998777653 2347777899998888764
No 115
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=31.83 E-value=1.1e+02 Score=22.18 Aligned_cols=58 Identities=12% Similarity=0.253 Sum_probs=40.0
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh-CCccccC
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA-HDLQFSG 100 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~-~~~~~~~ 100 (509)
.-++||+..- -....+.++..+||+|..+.+. |.-+|...+++.+...+.. +...+..
T Consensus 24 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 91 (126)
T 3ex7_B 24 ILFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMG 91 (126)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSS
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 3466776532 3456688899999999888762 3457888999999988863 3333333
No 116
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.58 E-value=1.2e+02 Score=20.45 Aligned_cols=54 Identities=13% Similarity=0.173 Sum_probs=38.0
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecC---------ccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGF---------VPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~vvv~dp~~~~~i~~~ 93 (509)
|..--++||+..- -....+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 4 ~~~~l~v~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (95)
T 2dnz_A 4 GSSGLYVGSLHFN---ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 66 (95)
T ss_dssp CCCEEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3344566777532 34566889999999988776532 347778899999988873
No 117
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.37 E-value=1.2e+02 Score=20.96 Aligned_cols=51 Identities=18% Similarity=0.099 Sum_probs=37.1
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 15 ~l~V~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 15 TLKVDNLTYR---TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp EEEEESCCTT---CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 4467777532 3456688999999999888763 2357788888888888863
No 118
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.14 E-value=1.2e+02 Score=21.27 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=37.3
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 27 ~l~V~nl~~~---~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 27 TVYCGGIASG---LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEEECCSSC---CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3466777532 3456688889999999888764 4567888899988888753
No 119
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.08 E-value=1.4e+02 Score=20.99 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=38.9
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHH
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~ 92 (509)
|...-++||+.. .-....++++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 14 p~~~l~V~nLp~---~~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 14 VSPVVHVRGLCE---SVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp CCSEEEEESCCS---SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCC---CCCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 444567788753 23456688999999999888764 356788889998888876
No 120
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.92 E-value=1.1e+02 Score=19.98 Aligned_cols=52 Identities=8% Similarity=0.157 Sum_probs=37.9
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
.--++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 13 ~~l~V~~l~~~---~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 13 TTLYVGGLGDT---ITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp CCEEEECCTTT---SCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred cEEEEcCCCCC---CCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 34566777532 3456688899999999887754 3457778899999988874
No 121
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.24 E-value=1e+02 Score=21.27 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=37.9
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
+...-++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 11 ~~~~l~V~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 11 TKRVLYVGGLAEE---VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp CCSCEEEESCCSS---CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4445567887543 3456788999999998777652 2346677789988888863
No 122
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=30.14 E-value=43 Score=15.82 Aligned_cols=12 Identities=25% Similarity=0.628 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHH
Q 038171 329 RVMKKVQEEIRS 340 (509)
Q Consensus 329 ~~q~~l~~Ei~~ 340 (509)
++|+++|.|+..
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578999999864
No 123
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=29.55 E-value=1.2e+02 Score=19.83 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=37.8
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
+...-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 6 ~~~~l~V~nl~~~---~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 6 TKRVLYVGGLAEE---VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp CSSEEEEECCCTT---CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCC---CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 3344567777532 3456788899999999888752 2347788899988888753
No 124
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=28.99 E-value=1e+02 Score=21.24 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=34.7
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec----CccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG----FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~----~~~~vvv~dp~~~~~i~~~ 93 (509)
++|++.. .-....+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 4 ~V~nLp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 4 YVGNLGT---GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp EEECCCS---SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 3555543 23456688999999998777653 3457778899999888763
No 125
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.93 E-value=1.2e+02 Score=20.59 Aligned_cols=54 Identities=13% Similarity=0.079 Sum_probs=38.1
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeE-EEeec---------CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLM-SLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~-~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
+..--++|++..- -....+.++..+||+|. .+.+. |.-+|-..+++.++..+..
T Consensus 8 ~~~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 8 MAASLWMGDLEPY---MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp SSSEEEECSCCTT---CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred CccEEEEeCCCCC---CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 4445577887532 34566889999999987 76653 2346777899999988873
No 126
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=28.70 E-value=96 Score=20.52 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=37.0
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
.--++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 12 ~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 12 GKMFVGGLSWD---TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp TEEEEECCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 34567777532 3456688999999998877652 1346778899999888864
No 127
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=28.58 E-value=1.2e+02 Score=20.60 Aligned_cols=52 Identities=17% Similarity=0.352 Sum_probs=38.2
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- .-....+.++..+||+|..+.+ -|.-+|-..+++.+...+..
T Consensus 12 ~l~V~nlp~~--~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 12 RLFIGNLPLK--NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEEESSTTS--CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCcc--cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 4467877630 2345668899999999887776 34568888899999998874
No 128
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.53 E-value=1.3e+02 Score=20.01 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=39.4
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~vvv~dp~~~~~i~~~ 93 (509)
+..--++|++..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 ~~~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 8 NTWKIFVGNVSAA---CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CSCCEEEESCCTT---CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 3345577887542 3456688999999999888764 3567888899988888763
No 129
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=28.35 E-value=1.1e+02 Score=21.81 Aligned_cols=51 Identities=14% Similarity=0.078 Sum_probs=37.8
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhC-CeEEEeec-----CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYG-PLMSLRIG-----FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG-~v~~i~~~-----~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+.. .-....++++.++|| .|..+.+. |..+|-..+++.++..+..
T Consensus 30 ~l~VgnLp~---~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPE---GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSC---CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC---CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 456787753 234677899999999 78777663 4568888899999888864
No 130
>2k6l_A Putative uncharacterized protein; xanthonomas axonopodis, RHH, structural proteomics, plasmid, hypothetical DNA binding protein; NMR {Xanthomonas axonopodis PV}
Probab=28.20 E-value=85 Score=18.69 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=24.6
Q ss_pred hChHHHHHHHHHHHHhhCCCCCCCChhhhccchhHHHHHHhhhccC
Q 038171 326 KHPRVMKKVQEEIRSLVGGNKSFVDEDDVQELHYLKAVVKETMRLQ 371 (509)
Q Consensus 326 ~~p~~q~~l~~Ei~~~~~~~~~~~~~~~~~~lp~l~a~i~EtlRl~ 371 (509)
-.+|+-+.+|.=+.+..|...++ |..+|.|++|.|
T Consensus 10 vs~d~d~~lR~~l~~~~G~rKGd-----------lSkfVEeAvr~~ 44 (51)
T 2k6l_A 10 VSPDVDQSVRMFIAAQGGGRKGD-----------LSRFIEDAVRAY 44 (51)
T ss_dssp ECHHHHHHHHHHHHHHCSCCSSC-----------HHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHhcCCcccc-----------HHHHHHHHHHHH
Confidence 34667778887777776654433 567899999876
No 131
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=28.12 E-value=1.2e+02 Score=21.37 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=37.6
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHhC
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKAH 94 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~~ 94 (509)
--++||+.. .-....+.++..+||+|..+.+. |.-+|...+++.++..+...
T Consensus 27 ~lfV~nLp~---~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 27 KMFIGGLSW---QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp CEEEESCCT---TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEEeCCCC---CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 446677653 23456688999999999887763 23478888999999988753
No 132
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=27.79 E-value=1.1e+02 Score=20.09 Aligned_cols=51 Identities=12% Similarity=0.111 Sum_probs=35.8
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++.. .-....++++.++||+|..+.+. |.-+|-..+++.++..+..
T Consensus 8 ~l~v~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 8 HVFVGDLSP---EITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEEESCCT---TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345677653 23456688999999998777652 1346778899998888864
No 133
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.77 E-value=1.5e+02 Score=20.24 Aligned_cols=58 Identities=12% Similarity=0.143 Sum_probs=40.1
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHhCCcccc
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKAHDLQFS 99 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~~~~~~~ 99 (509)
.--++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+..+...+.
T Consensus 11 ~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 11 NKIFVGGIPHN---CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp CEEEEESCCSS---CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 34467777532 3456688999999999887763 2347788899999998874443333
No 134
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.48 E-value=1.5e+02 Score=20.29 Aligned_cols=54 Identities=20% Similarity=0.241 Sum_probs=37.8
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecC---------ccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGF---------VPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~vvv~dp~~~~~i~~~ 93 (509)
+..--++|++..- -....+.++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 11 ~~~~l~v~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 1x5s_A 11 DEGKLFVGGLSFD---TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73 (102)
T ss_dssp CCSEEEEESCCTT---CCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHH
T ss_pred CCCEEEEECCCCC---CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3445567777532 34566888999999987777632 346777899998888853
No 135
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=27.25 E-value=1.9e+02 Score=21.28 Aligned_cols=49 Identities=12% Similarity=0.186 Sum_probs=34.9
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 67 ~v~nlp~---~~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 67 YVGGLAE---EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp EEECCCT---TCCHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCC---CCCHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 4565543 23356688999999999888762 2347788899998888864
No 136
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=27.12 E-value=1.2e+02 Score=19.61 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=33.7
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 5 ~V~nlp~---~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 5 FVGDLNV---NVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EEECCCT---TCCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 3455532 22356688888999998877653 2347788899998888764
No 137
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.95 E-value=94 Score=22.05 Aligned_cols=48 Identities=10% Similarity=0.039 Sum_probs=33.9
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHH
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~ 92 (509)
++||+.. .-....+.++..+||.|..+.+. |.-+|-..+++.++..+.
T Consensus 29 ~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 85 (114)
T 2cq4_A 29 FCMQLAA---RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIG 85 (114)
T ss_dssp EEESCCT---TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHH
Confidence 4566642 23456688899999999888764 234677788888888773
No 138
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=26.74 E-value=1.5e+02 Score=20.18 Aligned_cols=52 Identities=17% Similarity=0.335 Sum_probs=37.6
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- .-....+.++..+||.|..+.+. |.-+|-..+++.+...+..
T Consensus 24 ~l~V~nLp~~--~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 24 RLFIGNLPLK--NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEEEESCCSS--CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCcc--cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 3466777530 22456688999999999888763 4567888899999888873
No 139
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=26.64 E-value=1.5e+02 Score=20.03 Aligned_cols=49 Identities=10% Similarity=0.306 Sum_probs=35.4
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 6 ~V~nLp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 6 YLGSIPY---DQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp EEESCCT---TCCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC---CCCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 5666643 23456688999999999888763 2357778899999888863
No 140
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.35 E-value=1.6e+02 Score=20.29 Aligned_cols=55 Identities=15% Similarity=0.174 Sum_probs=38.4
Q ss_pred CCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecC---------ccEEEecCHHHHHHHHHhCC
Q 038171 38 KGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGF---------VPTLIVSSAKMAKETLKAHD 95 (509)
Q Consensus 38 ~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~vvv~dp~~~~~i~~~~~ 95 (509)
..--++|++..- -....+.++..+||+|..+.+.. .-+|-..+++.++..+..+.
T Consensus 16 ~~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~ 79 (105)
T 2dh8_A 16 IGKLFVGGLDWS---TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 79 (105)
T ss_dssp SSEECCBSCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCS
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCC
Confidence 344566777532 34566889999999987776531 34677889999999887643
No 141
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=25.79 E-value=1.1e+02 Score=21.60 Aligned_cols=58 Identities=17% Similarity=0.094 Sum_probs=35.9
Q ss_pred CCCCCCcccccccCCC--CCCCchhHHHHHhhhCCeEEEeec----------CccEEEecCHHHHHHHHH
Q 038171 35 PGPKGLPFIGNLHQFD--SSKPHVSFWELSKKYGPLMSLRIG----------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 35 pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~kyG~v~~i~~~----------~~~~vvv~dp~~~~~i~~ 92 (509)
+.|...-+++|+..-. ..+...-+++...+||.|..+.+. |.-+|-..+++.+.....
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~ 74 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVV 74 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHH
Confidence 4455566777776321 233455677777899998877653 123566678887777765
No 142
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=25.68 E-value=1.6e+02 Score=19.91 Aligned_cols=52 Identities=13% Similarity=0.245 Sum_probs=36.6
Q ss_pred CCcccccccCCCCCCCchhHH----HHHhhhCCeEEEeec------CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFW----ELSKKYGPLMSLRIG------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~----~~~~kyG~v~~i~~~------~~~~vvv~dp~~~~~i~~~ 93 (509)
..-++||+..- -....+. ++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 9 ~~l~V~nLp~~---~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 9 HTIYINNLNEK---IKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp SEEEEESCCTT---SCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 34467777532 2334444 888999999888764 4568888899988888864
No 143
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.63 E-value=1.7e+02 Score=20.36 Aligned_cols=54 Identities=20% Similarity=0.169 Sum_probs=38.7
Q ss_pred CCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 37 PKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 37 p~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
|...-++|++..- -....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 14 ~~~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 14 EGKTVFIRNLSFD---SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCCCEEEESCCTT---CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 3345577877532 3456688899999999888764 2347778899999988864
No 144
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.57 E-value=1.5e+02 Score=19.69 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=38.3
Q ss_pred CCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-CccEEEecCHHHHHHHHHh
Q 038171 38 KGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 38 ~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~vvv~dp~~~~~i~~~ 93 (509)
..--++|++..- -....++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 8 ~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 8 MVKLFIGNLPRE---ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp CEEEEEESCCSS---CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred CeEEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 334466777532 3456688999999999887753 4567888899999888853
No 145
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=25.32 E-value=1.1e+02 Score=21.84 Aligned_cols=51 Identities=20% Similarity=0.173 Sum_probs=36.9
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- -....+.++.++||+|..+.+. |.-+|-..+++.++..+..
T Consensus 9 ~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 9 KLFIGGLNRE---TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEEECCTTT---CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3456777532 3456688999999998777653 3457788899999998874
No 146
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.15 E-value=1.6e+02 Score=19.72 Aligned_cols=52 Identities=17% Similarity=0.218 Sum_probs=37.9
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec-CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG-FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~-~~~~vvv~dp~~~~~i~~~ 93 (509)
.--++||+..- -....++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 11 ~~l~V~nLp~~---~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 11 TKLHVGNISPT---CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEEEESCCSS---CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 34567777532 3466788999999999888764 3567778899998888863
No 147
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.07 E-value=1.7e+02 Score=20.21 Aligned_cols=57 Identities=19% Similarity=0.174 Sum_probs=38.8
Q ss_pred CCCCCCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec----------CccEEEecCHHHHHHHHH
Q 038171 32 SLPPGPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG----------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 32 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~----------~~~~vvv~dp~~~~~i~~ 92 (509)
..|..|..--++||+..- -....+.++..+|| |..+.+. |.-+|-..+++.++..+.
T Consensus 9 ~~~~~~~~~l~V~nlp~~---~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (104)
T 1wi8_A 9 RLPKSPPYTAFLGNLPYD---VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS 75 (104)
T ss_dssp CCCSSSCEEEEEESCCSS---CCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG
T ss_pred CCCCCCCCEEEEeCCCCc---CCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHh
Confidence 344444445567877532 34566888889999 8888763 234778889999998883
No 148
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=25.04 E-value=98 Score=22.37 Aligned_cols=48 Identities=8% Similarity=0.108 Sum_probs=34.2
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHH
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~ 92 (509)
++|++.. .-....+.++..+||+|..+.+. |.-+|...+++.++..+.
T Consensus 40 ~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 96 (124)
T 2jwn_A 40 YVGNVDY---GSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVA 96 (124)
T ss_dssp EEEEECT---TCCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHT
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHh
Confidence 5566643 23456688999999998777652 234788889999998883
No 149
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.02 E-value=1.3e+02 Score=20.93 Aligned_cols=40 Identities=18% Similarity=0.284 Sum_probs=31.9
Q ss_pred CchhHHHHHhhhCCeEEEeec----CccEEEecCHHHHHHHHHh
Q 038171 54 PHVSFWELSKKYGPLMSLRIG----FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 54 ~~~~~~~~~~kyG~v~~i~~~----~~~~vvv~dp~~~~~i~~~ 93 (509)
....++++..+||.|..+.+. |.-+|-..+++.+...+..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 356688999999999888874 3457888899999888875
No 150
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=25.02 E-value=1.8e+02 Score=20.37 Aligned_cols=50 Identities=18% Similarity=0.269 Sum_probs=36.2
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHH
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~ 92 (509)
--++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 28 ~l~V~nLp~---~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 28 RLYVGSLHF---NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEEECCCS---SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 346677753 23456688999999998777653 245778889999998886
No 151
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=24.98 E-value=1.3e+02 Score=20.32 Aligned_cols=51 Identities=20% Similarity=0.234 Sum_probs=36.4
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++..- -....++++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 18 ~l~v~nlp~~---~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 76 (95)
T 2ywk_A 18 TVFVGNLEAR---VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 76 (95)
T ss_dssp EEEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHH
T ss_pred EEEEECCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHH
Confidence 4466776532 3456688999999999877753 2347778899988888763
No 152
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=24.86 E-value=1.7e+02 Score=20.11 Aligned_cols=53 Identities=17% Similarity=0.179 Sum_probs=37.8
Q ss_pred CCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 38 KGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 38 ~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
..--++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 15 ~~~l~v~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 15 DRKLFVGMLNKQ---QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp CCEEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 344567877532 3456688999999998877653 3457778899999888863
No 153
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=24.79 E-value=1.5e+02 Score=22.83 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=36.4
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
-++||+.. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 75 l~V~nLp~---~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHE---EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCT---TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 46677653 23466788999999998777653 3457788899998888864
No 154
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=24.71 E-value=1.4e+02 Score=21.01 Aligned_cols=50 Identities=14% Similarity=0.242 Sum_probs=36.3
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEee-cCccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRI-GFVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~-~~~~~vvv~dp~~~~~i~~~ 93 (509)
-++||+.. .-....+.++..+||+|..+.+ -|.-+|...+++.+...+..
T Consensus 34 l~V~nLp~---~~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 34 LFVRPFPL---DVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EEECSSCT---TCCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEEECCCC---CCCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 35666643 2345668899999999877765 45567888899999888863
No 155
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.55 E-value=1.7e+02 Score=19.86 Aligned_cols=51 Identities=10% Similarity=0.080 Sum_probs=35.7
Q ss_pred CcccccccCCCCCCCchhHH----HHHhhhCCeEEEeec------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFW----ELSKKYGPLMSLRIG------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~----~~~~kyG~v~~i~~~------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+..- -....++ ++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 11 ~l~V~nL~~~---~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 11 DVQVSNIDYR---LSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEEESCCTT---SCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC---CCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 3467777532 2234455 888999999888764 3457778899988888763
No 156
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.27 E-value=1.7e+02 Score=19.81 Aligned_cols=51 Identities=22% Similarity=0.143 Sum_probs=36.9
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec------------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG------------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~------------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 7 ~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFS---TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 4466777532 3456688999999998777653 2457778899999998874
No 157
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.75 E-value=1.9e+02 Score=20.05 Aligned_cols=56 Identities=11% Similarity=0.038 Sum_probs=38.3
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEE-Eeec--------CccEEEecCHHHHHHHHHhCCccc
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMS-LRIG--------FVPTLIVSSAKMAKETLKAHDLQF 98 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~-i~~~--------~~~~vvv~dp~~~~~i~~~~~~~~ 98 (509)
.-++|++..- -....+.++..+||.|.. +.+. |.-+|-..+++.++..+......+
T Consensus 17 ~l~V~nLp~~---~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~ 81 (104)
T 1wg5_A 17 FVRLRGLPFG---CSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERI 81 (104)
T ss_dssp EEEEESCCTT---CCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCS
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchh
Confidence 4466777532 345668888899998764 5431 345888899999999987644333
No 158
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.74 E-value=74 Score=21.23 Aligned_cols=47 Identities=17% Similarity=0.255 Sum_probs=34.1
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec----CccEEEecCHHHHHHH
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG----FVPTLIVSSAKMAKET 90 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~----~~~~vvv~dp~~~~~i 90 (509)
-++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.++.+
T Consensus 8 l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 8 VFVGRCTGD---MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEEESCCSS---SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEEeCCCCC---CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 356777532 3456688888999999888764 4568888899988754
No 159
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=23.67 E-value=89 Score=21.90 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=31.3
Q ss_pred chhHHHHHhhhCCeEEEeecCc-cEEEecCHHHHHHHHHh
Q 038171 55 HVSFWELSKKYGPLMSLRIGFV-PTLIVSSAKMAKETLKA 93 (509)
Q Consensus 55 ~~~~~~~~~kyG~v~~i~~~~~-~~vvv~dp~~~~~i~~~ 93 (509)
..-+.++...||.|.--|+... -.+++.+|+.+++++..
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 3447788889998777788765 58888999999999883
No 160
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.66 E-value=97 Score=19.78 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=32.0
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHhC
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKAH 94 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~~ 94 (509)
++||+.. .-....+.++..+||+|..+.+. |.-+|-..+++.++..+...
T Consensus 4 ~v~nlp~---~~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 4 FIGGLSW---QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp EEESCCS---SCCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 3555543 22355688889999988666542 12356667888888887643
No 161
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=23.48 E-value=42 Score=28.79 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=19.1
Q ss_pred CCCCEEEeehhhhcCCCCCCCCC
Q 038171 394 PAKTLVYVNAWAIGRDPEAWENP 416 (509)
Q Consensus 394 p~g~~v~~~~~~~~~d~~~~~dp 416 (509)
|.||.|+.....-+.||+.|.+|
T Consensus 64 ~~GTLvmPt~t~~~~dp~~w~~p 86 (268)
T 3ijw_A 64 EEGTIIMPTQSSDLSDPKHWSRP 86 (268)
T ss_dssp TTSEEEEECCCGGGSCGGGCCSS
T ss_pred CCCeEEEeccccccCChhhhcCC
Confidence 57888888887778899999766
No 162
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.44 E-value=1.7e+02 Score=20.41 Aligned_cols=51 Identities=16% Similarity=0.101 Sum_probs=37.0
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCC-eEEEeec----------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGP-LMSLRIG----------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~-v~~i~~~----------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++.. .-....+.++..+||+ |..+.+. |.-+|-..+++.+...+..
T Consensus 10 ~l~V~nLp~---~~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 10 RLFIGGIPK---MKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEEECCCT---TSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEEeCCCC---cCCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 346677753 2345668889999998 8887764 2457788899999988864
No 163
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=22.60 E-value=1.7e+02 Score=19.18 Aligned_cols=49 Identities=18% Similarity=0.228 Sum_probs=35.0
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEee----------cCccEEEecCHHHHHHHHHh
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRI----------GFVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~----------~~~~~vvv~dp~~~~~i~~~ 93 (509)
++||+..- -....+.++..+||+|..+.+ -|.-+|-..+++.++..+..
T Consensus 8 ~V~nlp~~---~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 8 HIGRLTRN---VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp EEECCCTT---CCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 55666432 245668888899999877765 23457888899999988874
No 164
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.42 E-value=1.9e+02 Score=19.82 Aligned_cols=52 Identities=19% Similarity=0.276 Sum_probs=38.2
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeecC---------ccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIGF---------VPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~~---------~~~vvv~dp~~~~~i~~~ 93 (509)
.--++|++..- -....+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 16 ~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 16 ATVYVGGLDEK---VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp TEEEEECCCTT---CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 34567777532 34566889999999998887632 347888899999999874
No 165
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=22.38 E-value=1.9e+02 Score=19.96 Aligned_cols=51 Identities=16% Similarity=0.122 Sum_probs=35.8
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec--------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG--------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~--------~~~~vvv~dp~~~~~i~~~ 93 (509)
.-++||+..- -....+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 31 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFG---VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4466776432 3456688889999998777653 2347778899998888774
No 166
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=22.04 E-value=2e+02 Score=19.81 Aligned_cols=52 Identities=17% Similarity=0.166 Sum_probs=37.1
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
.--++|++.. .-....++++.++||+|..+.+. +.-+|-..+++.+...+..
T Consensus 14 ~~l~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (106)
T 2dgp_A 14 IKLFIGQIPR---NLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 74 (106)
T ss_dssp EEEEEESCCT---TCCHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCC---CCCHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3446777753 23456688999999998887753 2347777899988888763
No 167
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.92 E-value=1.2e+02 Score=20.91 Aligned_cols=50 Identities=16% Similarity=0.246 Sum_probs=35.0
Q ss_pred cccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 41 PFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 41 p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
-++|++.. .-....+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 11 l~V~nlp~---~~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 11 VFVGNIPY---EATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEEESCCT---TSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEEeCCCC---cCCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35666652 23456688889999998766643 2347778899999988864
No 168
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=21.85 E-value=1.1e+02 Score=22.21 Aligned_cols=49 Identities=6% Similarity=0.096 Sum_probs=35.5
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
--++|++ . -....+.++..+||+|..+.++ |.-+|...+++.+...+..
T Consensus 41 ~lfVgnl-~----~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 41 TLYVYGE-D----MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEEECS-S----CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEEcCC-C----CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4467773 2 2456788999999998777765 4457777899988888754
No 169
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=21.85 E-value=1.4e+02 Score=19.66 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=32.8
Q ss_pred ccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHH
Q 038171 42 FIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 42 ~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~ 92 (509)
++||+..- -....+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 10 ~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 66 (89)
T 3ucg_A 10 YVGNVDYG---ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLA 66 (89)
T ss_dssp EEESCCTT---CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGG
T ss_pred EEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHh
Confidence 45555432 2456688889999998777642 134777888888888873
No 170
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=21.81 E-value=1.4e+02 Score=24.21 Aligned_cols=55 Identities=20% Similarity=0.329 Sum_probs=38.5
Q ss_pred CCCCCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---------CccEEEecCHHHHHHHHHh
Q 038171 36 GPKGLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 36 gp~~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---------~~~~vvv~dp~~~~~i~~~ 93 (509)
.|..--++||+.. .-....+.++.++||+|..+.+. |.-+|-..+++.+...+..
T Consensus 13 ~p~~tlfVgnLp~---~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 13 YPMASLYVGDLHP---DVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp --CCEEEEESCCT---TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCC---CCCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3444457788753 23466788999999999877652 2347888899999888764
No 171
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=21.67 E-value=2.3e+02 Score=23.26 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=38.2
Q ss_pred CcccccccCCCCCCCchhHHHHHhhhCCeEEEeec----CccEEEecCHHHHHHHHH
Q 038171 40 LPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG----FVPTLIVSSAKMAKETLK 92 (509)
Q Consensus 40 ~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~----~~~~vvv~dp~~~~~i~~ 92 (509)
--++||+..- .-....+.++.++||+|..+.+. |.-+|-..+++.++..+.
T Consensus 36 ~l~V~nLp~~--~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~ 90 (229)
T 2adc_A 36 VLLVSNLNPE--RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS 90 (229)
T ss_dssp EEEEESCCTT--TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCcc--cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3467777531 22456788999999999888764 456888899999999886
No 172
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.26 E-value=1.6e+02 Score=20.03 Aligned_cols=52 Identities=19% Similarity=0.153 Sum_probs=36.7
Q ss_pred CCcccccccCCCCCCCchhHHHHHhhhCCeEEEeec---CccEEEecCHHHHHHHHHh
Q 038171 39 GLPFIGNLHQFDSSKPHVSFWELSKKYGPLMSLRIG---FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 39 ~~p~~G~~~~~~~~~~~~~~~~~~~kyG~v~~i~~~---~~~~vvv~dp~~~~~i~~~ 93 (509)
.--++|++..- -....++++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 16 ~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 16 SRLFVGNLPPD---ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp TEEEEESCCTT---CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred CEEEEeCCCCC---CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 34467777532 3456688899999998877764 3456777888888888753
No 173
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=21.17 E-value=1.5e+02 Score=19.84 Aligned_cols=37 Identities=16% Similarity=0.103 Sum_probs=27.1
Q ss_pred hhHHHHHhhhCCe---EEEeecCccEEEecC-----HHHHHHHHH
Q 038171 56 VSFWELSKKYGPL---MSLRIGFVPTLIVSS-----AKMAKETLK 92 (509)
Q Consensus 56 ~~~~~~~~kyG~v---~~i~~~~~~~vvv~d-----p~~~~~i~~ 92 (509)
...++++++|.++ +++..++.+-+.|++ -+.+.+++.
T Consensus 24 EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLq 68 (81)
T 1ghh_A 24 ELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQ 68 (81)
T ss_dssp HHHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHH
Confidence 4567889999995 999998888888754 344555554
No 174
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=20.84 E-value=2e+02 Score=21.13 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=35.3
Q ss_pred CcccccccCCCCC-CCchhHHHHHhhhCCeEEEeec------CccEEEecCHHHHHHHHHh
Q 038171 40 LPFIGNLHQFDSS-KPHVSFWELSKKYGPLMSLRIG------FVPTLIVSSAKMAKETLKA 93 (509)
Q Consensus 40 ~p~~G~~~~~~~~-~~~~~~~~~~~kyG~v~~i~~~------~~~~vvv~dp~~~~~i~~~ 93 (509)
--++||+..-... +....+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 3467777532111 1112355788999999888763 4568888899988888864
No 175
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=20.79 E-value=49 Score=28.50 Aligned_cols=23 Identities=30% Similarity=0.488 Sum_probs=18.7
Q ss_pred CCCCEEEeehhhhcCCCCCCCCC
Q 038171 394 PAKTLVYVNAWAIGRDPEAWENP 416 (509)
Q Consensus 394 p~g~~v~~~~~~~~~d~~~~~dp 416 (509)
|.||.|+.....-+.||..|.+|
T Consensus 62 ~~GTLvmPtft~~~~dp~~w~~~ 84 (273)
T 2nyg_A 62 EEGTIVMPSQSVELSDPKEWGNP 84 (273)
T ss_dssp TTSEEEEECCCTTSSCGGGCCSS
T ss_pred CCCeEEEeccccccCChhhhcCC
Confidence 57888888888888889888765
Done!