Your job contains 1 sequence.
>038172
FSLPALEHNESVAAAAQRRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKP
CRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMMVVGVVGYVKTPRGLR
SLNTVWAQHLSEEVRRRFYKNWCKSKKKAFTKYSKQYETDEGKKSIQAQLEKIKKYASVV
RVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDI
IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE
MNKKVYKLGKGGQESHTGITEFD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038172
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018605 - symbol:RP1 "ribosomal protein 1" spe... 1354 2.4e-138 1
TAIR|locus:2200873 - symbol:RPL3B "R-protein L3 B" specie... 1340 7.4e-137 1
CGD|CAL0006304 - symbol:RPL3 species:5476 "Candida albica... 1058 5.7e-107 1
UNIPROTKB|Q59LS1 - symbol:RPL3 "Likely cytosolic ribosoma... 1058 5.7e-107 1
UNIPROTKB|F1NEM8 - symbol:RPL3 "Uncharacterized protein" ... 1048 6.5e-106 1
UNIPROTKB|F1NLW1 - symbol:RPL3 "Uncharacterized protein" ... 1048 6.5e-106 1
UNIPROTKB|P39023 - symbol:RPL3 "60S ribosomal protein L3"... 1045 1.4e-105 1
RGD|735105 - symbol:Rpl3 "ribosomal protein L3" species:1... 1045 1.4e-105 1
ASPGD|ASPL0000001032 - symbol:rpl3 species:162425 "Emeric... 1043 2.2e-105 1
UNIPROTKB|J9P6X5 - symbol:RPL3 "Uncharacterized protein" ... 1037 9.5e-105 1
MGI|MGI:1351605 - symbol:Rpl3 "ribosomal protein L3" spec... 1037 9.5e-105 1
UNIPROTKB|F1SNY2 - symbol:RPL3 "60S ribosomal protein L3"... 1036 1.2e-104 1
UNIPROTKB|F1PLN2 - symbol:RPL3 "Uncharacterized protein" ... 1035 1.6e-104 1
POMBASE|SPAPB8E5.06c - symbol:rpl302 "60S ribosomal prote... 1035 1.6e-104 1
POMBASE|SPAC17A5.03 - symbol:rpl301 "60S ribosomal protei... 1034 2.0e-104 1
UNIPROTKB|P39872 - symbol:RPL3 "60S ribosomal protein L3"... 1030 5.3e-104 1
DICTYBASE|DDB_G0291862 - symbol:rpl3 "60S ribosomal prote... 1027 1.1e-103 1
UNIPROTKB|Q4R5Q0 - symbol:RPL3 "60S ribosomal protein L3"... 1024 2.3e-103 1
ZFIN|ZDB-GENE-030131-1291 - symbol:rpl3 "ribosomal protei... 997 1.7e-100 1
SGD|S000005589 - symbol:RPL3 "Ribosomal 60S subunit prote... 996 2.1e-100 1
WB|WBGene00004414 - symbol:rpl-3 species:6239 "Caenorhabd... 996 2.1e-100 1
UNIPROTKB|H7C422 - symbol:RPL3 "60S ribosomal protein L3"... 988 1.5e-99 1
FB|FBgn0020910 - symbol:RpL3 "Ribosomal protein L3" speci... 972 7.4e-98 1
UNIPROTKB|Q3SZ10 - symbol:RPL3L "60S ribosomal protein L3... 943 8.7e-95 1
UNIPROTKB|Q92901 - symbol:RPL3L "60S ribosomal protein L3... 940 1.8e-94 1
UNIPROTKB|F1P5V2 - symbol:RPL3L "Uncharacterized protein"... 937 3.8e-94 1
GENEDB_PFALCIPARUM|PF10_0272 - symbol:PF10_0272 "ribosoma... 893 1.7e-89 1
UNIPROTKB|Q8IJC6 - symbol:PF10_0272 "60S ribosomal protei... 893 1.7e-89 1
UNIPROTKB|B5MCW2 - symbol:RPL3 "60S ribosomal protein L3"... 798 2.0e-79 1
UNIPROTKB|G5E9G0 - symbol:RPL3 "60S ribosomal protein L3"... 798 2.0e-79 1
UNIPROTKB|H7C3M2 - symbol:RPL3 "60S ribosomal protein L3"... 758 3.5e-75 1
UNIPROTKB|H9L0E4 - symbol:H9L0E4 "Uncharacterized protein... 504 2.9e-48 1
UNIPROTKB|F1N578 - symbol:F1N578 "Uncharacterized protein... 256 7.6e-46 2
UNIPROTKB|F8WCR1 - symbol:RPL3 "60S ribosomal protein L3"... 466 3.1e-44 1
RGD|1306315 - symbol:Rpl3l "ribosomal protein L3-like" sp... 457 2.8e-43 1
UNIPROTKB|D4A136 - symbol:D4A136 "Uncharacterized protein... 434 7.5e-41 1
UNIPROTKB|Q29293 - symbol:RPL3 "60S ribosomal protein L3"... 379 5.1e-35 1
RGD|1308952 - symbol:Rab11fip3 "RAB11 family interacting ... 356 1.6e-31 1
RGD|1591334 - symbol:Nme4 "NME/NM23 nucleoside diphosphat... 356 1.6e-31 1
TIGR_CMR|CHY_2309 - symbol:CHY_2309 "ribosomal protein L3... 114 0.00014 1
UNIPROTKB|H3BQN3 - symbol:RPL3L "60S ribosomal protein L3... 96 0.00025 1
TIGR_CMR|BA_0110 - symbol:BA_0110 "ribosomal protein L3" ... 108 0.00077 1
>TAIR|locus:2018605 [details] [associations]
symbol:RP1 "ribosomal protein 1" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR000597
Pfam:PF00297 EMBL:CP002684 GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005618 GO:GO:0005730 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC005687
GO:GO:0022625 UniGene:At.21634 UniGene:At.48973 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 EMBL:M32654 EMBL:AY057487
EMBL:AF327421 EMBL:AF361101 EMBL:AF361809 EMBL:AY039544
EMBL:AY052743 EMBL:Z25950 IPI:IPI00540778 PIR:E96498 PIR:JQ0771
RefSeq:NP_001031146.1 RefSeq:NP_001185148.1 RefSeq:NP_001185149.1
RefSeq:NP_001185150.1 RefSeq:NP_001185151.1 RefSeq:NP_001185152.1
RefSeq:NP_175009.1 RefSeq:NP_973966.1 UniGene:At.24630
UniGene:At.7195 ProteinModelPortal:P17094 SMR:P17094 STRING:P17094
PaxDb:P17094 PRIDE:P17094 EnsemblPlants:AT1G43170.1
EnsemblPlants:AT1G43170.2 EnsemblPlants:AT1G43170.3
EnsemblPlants:AT1G43170.5 EnsemblPlants:AT1G43170.6
EnsemblPlants:AT1G43170.7 EnsemblPlants:AT1G43170.8
EnsemblPlants:AT1G43170.9 GeneID:840916 KEGG:ath:AT1G43170
GeneFarm:274 TAIR:At1g43170 InParanoid:P17094 KO:K02925 OMA:GFHQRTE
PhylomeDB:P17094 ProtClustDB:CLSN2679512 Genevestigator:P17094
GermOnline:AT1G43170 Uniprot:P17094
Length = 389
Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
Identities = 248/303 (81%), Positives = 272/303 (89%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIET YVKTPRGLRSLNTVWAQHLSEEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW QY++++GKK IQAQLEK+KKYA+V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGTIA+KVD+AY FFEKQIP++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKK+Y+LGK G E+HT +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>TAIR|locus:2200873 [details] [associations]
symbol:RPL3B "R-protein L3 B" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA;TAS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] [GO:0052541 "plant-type cell
wall cellulose metabolic process" evidence=RCA] [GO:0052546 "cell
wall pectin metabolic process" evidence=RCA] InterPro:IPR000597
Pfam:PF00297 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AC005850 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 ProtClustDB:CLSN2679512 EMBL:M32655
EMBL:BT003869 EMBL:BT005702 IPI:IPI00524843 PIR:B96641 PIR:JQ0772
RefSeq:NP_176352.1 UniGene:At.36412 ProteinModelPortal:P22738
SMR:P22738 STRING:P22738 PaxDb:P22738 PRIDE:P22738
EnsemblPlants:AT1G61580.1 GeneID:842454 KEGG:ath:AT1G61580
GeneFarm:277 TAIR:At1g61580 HOGENOM:HOG000107319 InParanoid:P22738
OMA:QETHSAM PhylomeDB:P22738 Genevestigator:P22738
GermOnline:AT1G61580 Uniprot:P22738
Length = 390
Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
Identities = 249/303 (82%), Positives = 270/303 (89%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSKLHKKETCEAVTIIET YVKTPRGLRSL TVWAQHLSEE+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW ++ET+EGKK IQ+QLEK+KKY SV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG IA+KVDYA FEKQ+PVDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKVY++GK GQE+H+ +T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 321 EFD 323
E+D
Sbjct: 301 EYD 303
>CGD|CAL0006304 [details] [associations]
symbol:RPL3 species:5476 "Candida albicans" [GO:0009986 "cell
surface" evidence=IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
CGD:CAL0006304 GO:GO:0009986 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0032040 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
HOGENOM:HOG000107319 EMBL:AACQ01000248 EMBL:AACQ01000247
RefSeq:XP_710673.1 RefSeq:XP_710682.1 ProteinModelPortal:Q59LS1
SMR:Q59LS1 STRING:Q59LS1 GeneID:3647719 GeneID:3647728
KEGG:cal:CaO19.1601 KEGG:cal:CaO19.9169 Uniprot:Q59LS1
Length = 389
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 199/303 (65%), Positives = 240/303 (79%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++T YV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +Y TD K ++ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATDA--KQVETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK++ VD+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>UNIPROTKB|Q59LS1 [details] [associations]
symbol:RPL3 "Likely cytosolic ribosomal protein L3"
species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
evidence=IDA] [GO:0032040 "small-subunit processome" evidence=IDA]
InterPro:IPR000597 Pfam:PF00297 CGD:CAL0006304 GO:GO:0009986
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0032040
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
EMBL:AACQ01000248 EMBL:AACQ01000247 RefSeq:XP_710673.1
RefSeq:XP_710682.1 ProteinModelPortal:Q59LS1 SMR:Q59LS1
STRING:Q59LS1 GeneID:3647719 GeneID:3647728 KEGG:cal:CaO19.1601
KEGG:cal:CaO19.9169 Uniprot:Q59LS1
Length = 389
Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
Identities = 199/303 (65%), Positives = 240/303 (79%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSLGFLPRKRAA+ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EA T+++T YV+TPRGLRSL TVWA+HLSEEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +Y TD K ++ +L +IKKYASVVRVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATDA--KQVETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG++++KVD+A FEK++ VD+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N KVY++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEAN-GAT 296
Query: 321 EFD 323
EFD
Sbjct: 297 EFD 299
>UNIPROTKB|F1NEM8 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AADN02006114 IPI:IPI00820650
Ensembl:ENSGALT00000019879 ArrayExpress:F1NEM8 Uniprot:F1NEM8
Length = 403
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 191/292 (65%), Positives = 236/292 (80%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 82 KPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ET YV+TPRGLRS T++A+H+S+E +RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 121
Query: 142 WCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +++ +EGKK ++ +KKY V+RV+AHTQ+R + L+QKK+HL
Sbjct: 122 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSHL 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEKVD+A E+Q+PV +VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 181 MEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 292
>UNIPROTKB|F1NLW1 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AADN02006114 IPI:IPI00592041
UniGene:Gga.990 PRIDE:F1NLW1 Ensembl:ENSGALT00000030605
NextBio:20821234 ArrayExpress:F1NLW1 Uniprot:F1NLW1
Length = 402
Score = 1048 (374.0 bits), Expect = 6.5e-106, P = 6.5e-106
Identities = 191/292 (65%), Positives = 236/292 (80%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60
Query: 82 KPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ET YV+TPRGLRS T++A+H+S+E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 120
Query: 142 WCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +++ +EGKK ++ +KKY V+RV+AHTQ+R + L+QKK+HL
Sbjct: 121 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSHL 179
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEKVD+A E+Q+PV +VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 180 MEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 239
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQ 313
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G Q
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQ 291
>UNIPROTKB|P39023 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0006414 "translational elongation" evidence=TAS] [GO:0006415
"translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000597
Pfam:PF00297 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 HOVERGEN:HBG001864 CTD:6122 ChiTaRS:RPL3
EMBL:X73460 EMBL:AB062291 EMBL:CR456566 EMBL:AK315693 EMBL:AL022326
EMBL:BC002408 EMBL:BC006483 EMBL:BC008003 EMBL:BC012146
EMBL:BC012786 EMBL:BC013674 EMBL:BC014017 EMBL:BC015032
EMBL:BC015767 EMBL:BC063662 EMBL:BC088373 EMBL:BC107711 EMBL:M90054
EMBL:L22453 EMBL:AB007166 IPI:IPI00550021 PIR:S34195
RefSeq:NP_000958.1 UniGene:Hs.119598 ProteinModelPortal:P39023
SMR:P39023 IntAct:P39023 MINT:MINT-1145548 STRING:P39023
PhosphoSite:P39023 DMDM:730565 SWISS-2DPAGE:P39023 PaxDb:P39023
PRIDE:P39023 DNASU:6122 Ensembl:ENST00000216146 GeneID:6122
KEGG:hsa:6122 UCSC:uc003axh.3 GeneCards:GC22M039723
H-InvDB:HIX0172339 HGNC:HGNC:10332 HPA:HPA003365 MIM:604163
neXtProt:NX_P39023 PharmGKB:PA34713 InParanoid:P39023
PhylomeDB:P39023 GenomeRNAi:6122 NextBio:23777 ArrayExpress:P39023
Bgee:P39023 CleanEx:HS_RPL3 Genevestigator:P39023
GermOnline:ENSG00000100316 Uniprot:P39023
Length = 403
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 190/291 (65%), Positives = 236/291 (81%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>RGD|735105 [details] [associations]
symbol:Rpl3 "ribosomal protein L3" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0071353 "cellular
response to interleukin-4" evidence=ISO] InterPro:IPR000597
Pfam:PF00297 RGD:735105 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
GeneTree:ENSGT00390000017606 HOVERGEN:HBG001864 OrthoDB:EOG43XV3G
CTD:6122 EMBL:X62166 EMBL:BC058494 IPI:IPI00395285 PIR:JQ1536
RefSeq:NP_942048.1 UniGene:Rn.107726 ProteinModelPortal:P21531
SMR:P21531 STRING:P21531 PRIDE:P21531 Ensembl:ENSRNOT00000022949
Ensembl:ENSRNOT00000067032 GeneID:300079 KEGG:rno:300079
UCSC:RGD:735105 InParanoid:P21531 NextBio:646297
Genevestigator:P21531 GermOnline:ENSRNOG00000016896 Uniprot:P21531
Length = 403
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 190/291 (65%), Positives = 235/291 (80%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>ASPGD|ASPL0000001032 [details] [associations]
symbol:rpl3 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0005840
EMBL:BN001301 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
ProteinModelPortal:C8V202 SMR:C8V202 EnsemblFungi:CADANIAT00006804
Uniprot:C8V202
Length = 392
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 193/303 (63%), Positives = 235/303 (77%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHGSL +LPRKRAARHRG+VK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PG+K+HKKE EA T+IET Y++TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW ++ + G SI LE+IKKY +VVRVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENGA-SITRDLERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++AEKVD+A FEK I +D +F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N KV+++GKG E++ T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEANAS-T 297
Query: 321 EFD 323
+FD
Sbjct: 298 DFD 300
>UNIPROTKB|J9P6X5 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474
GeneTree:ENSGT00390000017606 EMBL:AAEX03008562
Ensembl:ENSCAFT00000005720 OMA:TIFSEHI Uniprot:J9P6X5
Length = 403
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 188/291 (64%), Positives = 235/291 (80%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F++ARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSMARAGQKGYHHRTEINKKIYKIGQG 290
>MGI|MGI:1351605 [details] [associations]
symbol:Rpl3 "ribosomal protein L3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0071353 "cellular response to interleukin-4"
evidence=IDA] InterPro:IPR000597 Pfam:PF00297 MGI:MGI:1351605
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:CH466550
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0071353 GO:GO:0022625
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G CTD:6122 EMBL:Y00225
EMBL:U89417 EMBL:AK088993 EMBL:AK144518 EMBL:AK144816 EMBL:AK146502
EMBL:AK149494 EMBL:AK151596 EMBL:AK166433 EMBL:AK166825
EMBL:AK167787 EMBL:AK167947 EMBL:AK168040 EMBL:AK168059
EMBL:AK168126 EMBL:AK168128 EMBL:AK168224 EMBL:AK168744
EMBL:AK169060 EMBL:AK169235 EMBL:AK169321 EMBL:AK170819
EMBL:BC009655 EMBL:BC083134 EMBL:BC094059 EMBL:BC158039
IPI:IPI00321170 RefSeq:NP_038790.2 UniGene:Mm.290771
UniGene:Mm.396243 UniGene:Mm.474802 ProteinModelPortal:P27659
SMR:P27659 IntAct:P27659 STRING:P27659 PhosphoSite:P27659
PaxDb:P27659 PRIDE:P27659 Ensembl:ENSMUST00000081650 GeneID:27367
KEGG:mmu:27367 InParanoid:Q91VJ6 NextBio:305258 Bgee:P27659
CleanEx:MM_RPL3 Genevestigator:P27659 GermOnline:ENSMUSG00000057111
GermOnline:ENSMUSG00000060036 Uniprot:P27659
Length = 403
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 189/291 (64%), Positives = 234/291 (80%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ D GKK ++ +KKY V+R++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>UNIPROTKB|F1SNY2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926 PROSITE:PS00474
KO:K02925 OMA:GFHQRTE GeneTree:ENSGT00390000017606 CTD:6122
EMBL:CU686742 RefSeq:NP_001230992.1 UniGene:Ssc.53708
Ensembl:ENSSSCT00000000095 GeneID:396768 KEGG:ssc:396768
ArrayExpress:F1SNY2 Uniprot:F1SNY2
Length = 403
Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
Identities = 188/291 (64%), Positives = 235/291 (80%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>UNIPROTKB|F1PLN2 [details] [associations]
symbol:RPL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 OMA:GFHQRTE
GeneTree:ENSGT00390000017606 EMBL:AAEX03007312
ProteinModelPortal:F1PLN2 Ensembl:ENSCAFT00000002096 Uniprot:F1PLN2
Length = 403
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 188/290 (64%), Positives = 234/290 (80%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 82 KPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ET YV+TPRGLR+ T++A+H+S+E +RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 142 WCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +++ D+GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 122 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 180
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>POMBASE|SPAPB8E5.06c [details] [associations]
symbol:rpl302 "60S ribosomal protein L3" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000597 Pfam:PF00297
PomBase:SPAPB8E5.06c EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 InterPro:IPR009000 SUPFAM:SSF50447
GO:GO:0022625 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 OrthoDB:EOG4CG3HR EMBL:X57734
PIR:S25592 RefSeq:NP_594780.1 ProteinModelPortal:P36584 SMR:P36584
STRING:P36584 EnsemblFungi:SPAPB8E5.06c.1 GeneID:2543309
KEGG:spo:SPAPB8E5.06c NextBio:20804326 Uniprot:P36584
Length = 388
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 198/303 (65%), Positives = 233/303 (76%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVTIIET YV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++A FEK + + + F+++EMID+IGVT+GKG EG RWG R
Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N K+Y++G G ++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>POMBASE|SPAC17A5.03 [details] [associations]
symbol:rpl301 "60S ribosomal protein L3" species:4896
"Schizosaccharomyces pombe" [GO:0000027 "ribosomal large subunit
assembly" evidence=ISO] [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006412
"translation" evidence=ISO] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR000597 Pfam:PF00297
PomBase:SPAC17A5.03 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0000027 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319 OMA:QETHSAM
EMBL:U00798 PIR:T37818 RefSeq:NP_593471.1 ProteinModelPortal:P40372
SMR:P40372 IntAct:P40372 STRING:P40372 PRIDE:P40372
EnsemblFungi:SPAC17A5.03.1 GeneID:2542265 KEGG:spo:SPAC17A5.03
OrthoDB:EOG4CG3HR NextBio:20803329 Uniprot:P40372
Length = 388
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 197/303 (65%), Positives = 233/303 (76%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSH KFE PRHGSLGFLPRKRA+R RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK+HK+E EAVT+IET YV+TPRGLRSL TVWA+HLSEEV+RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +Y E +SI +LE+IKKY SVVRVLAHTQIRK L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGG++A+KV++A FEK + + + F+++EMID+IGVT+GKG EG RWG R
Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N K+Y++G G ++ T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296
Query: 321 EFD 323
+FD
Sbjct: 297 DFD 299
>UNIPROTKB|P39872 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
OMA:GFHQRTE HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G EMBL:Z29555 EMBL:AJ238851
EMBL:BT021012 EMBL:BC102253 IPI:IPI00687634 PIR:S50221
RefSeq:NP_777140.1 UniGene:Bt.3467 ProteinModelPortal:P39872
SMR:P39872 STRING:P39872 PRIDE:P39872 Ensembl:ENSBTAT00000004188
GeneID:282688 KEGG:bta:282688 CTD:6122 InParanoid:P39872
NextBio:20806356 ArrayExpress:P39872 Uniprot:P39872
Length = 403
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 187/291 (64%), Positives = 233/291 (80%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ +GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LME+QVNGGT+AEK+D+A E+Q+PV VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>DICTYBASE|DDB_G0291862 [details] [associations]
symbol:rpl3 "60S ribosomal protein L3" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000597 Pfam:PF00297
dictyBase:DDB_G0291862 GO:GO:0005615 GenomeReviews:CM000155_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000186
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
EMBL:L08391 PIR:JC4254 RefSeq:XP_629921.1 ProteinModelPortal:P34113
SMR:P34113 STRING:P34113 PRIDE:P34113 EnsemblProtists:DDB0191094
GeneID:8628422 KEGG:ddi:DDB_G0291862 ProtClustDB:PTZ00103
Uniprot:P34113
Length = 398
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 196/308 (63%), Positives = 237/308 (76%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHG+LGF PRKRAARH+GKVK+FPKDD ++ LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
EKPGSK+HKKE EAVTIIE YV+T +GL++ TVWAQHLS+ RRR YK
Sbjct: 61 EKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYK 120
Query: 141 NWCXXXXXXXXXXXX-QYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKA 199
NW QYET+EGKKSI+A L+ IKK SVVRV+AHTQ+ K+K L QKKA
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKA 179
Query: 200 HLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 259
H++EIQVNGG+I EKV++A FEK + V VF ++E+ID+IGVTKGKG+ GV+ RWGV
Sbjct: 180 HVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVR 239
Query: 260 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG----GQES 315
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKK+Y++G+ G++
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQI 299
Query: 316 HTGITEFD 323
TG TEFD
Sbjct: 300 STGKTEFD 307
>UNIPROTKB|Q4R5Q0 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9541 "Macaca
fascicularis" [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOVERGEN:HBG001864 EMBL:AB169493
ProteinModelPortal:Q4R5Q0 SMR:Q4R5Q0 PRIDE:Q4R5Q0 Uniprot:Q4R5Q0
Length = 403
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 188/291 (64%), Positives = 234/291 (80%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE AVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 240 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 290
>ZFIN|ZDB-GENE-030131-1291 [details] [associations]
symbol:rpl3 "ribosomal protein L3" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0031017
"exocrine pancreas development" evidence=IMP] InterPro:IPR000597
Pfam:PF00297 ZFIN:ZDB-GENE-030131-1291 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0031017 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOVERGEN:HBG001864
CTD:6122 EMBL:AY561514 IPI:IPI00511925 RefSeq:NP_001001590.1
UniGene:Dr.141319 ProteinModelPortal:Q6Q418 SMR:Q6Q418
STRING:Q6Q418 PRIDE:Q6Q418 GeneID:322571 KEGG:dre:322571
InParanoid:Q6Q418 NextBio:20807854 ArrayExpress:Q6Q418 Bgee:Q6Q418
Uniprot:Q6Q418
Length = 403
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 181/291 (62%), Positives = 226/291 (77%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF P HGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ET YV TPRGLRS T++A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ +EGKK ++ +KKY ++R++AHTQ+R + +QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPH-RQKKSH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
LMEIQ+NGGTI++KVD+A E+ IP+ VF +DEMID+IGVTKG G +GV +RW +
Sbjct: 180 LMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVG 290
>SGD|S000005589 [details] [associations]
symbol:RPL3 "Ribosomal 60S subunit protein L3" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;TAS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0002181 "cytoplasmic translation" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=TAS] InterPro:IPR000597 Pfam:PF00297
SGD:S000005589 EMBL:BK006948 GO:GO:0003735 GO:GO:0002181
EMBL:Z70678 PDB:4B6A PDBsum:4B6A GO:GO:0000027 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087 InterPro:IPR019926
PROSITE:PS00474 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 OrthoDB:EOG4CG3HR GeneTree:ENSGT00390000017606
EMBL:J01351 EMBL:Z74971 PIR:S66946 RefSeq:NP_014706.1
ProteinModelPortal:P14126 SMR:P14126 DIP:DIP-6264N IntAct:P14126
MINT:MINT-604187 STRING:P14126 PaxDb:P14126 PeptideAtlas:P14126
PRIDE:P14126 EnsemblFungi:YOR063W GeneID:854229 KEGG:sce:YOR063W
EvolutionaryTrace:P14126 NextBio:976109 Genevestigator:P14126
GermOnline:YOR063W Uniprot:P14126
Length = 387
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 192/303 (63%), Positives = 229/303 (75%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRK+E PRHG LGFLPRKRAA R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK HK+E EAVT+++T YV+TPRGLRSL TVWA+HLS+EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +Y D I+ +L +IKKYASVVRVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L EIQ+NGG+I+EKVD+A FEK + VD+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGGQESHTGIT 320
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GKG E++ G T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEAN-GAT 296
Query: 321 EFD 323
FD
Sbjct: 297 SFD 299
>WB|WBGene00004414 [details] [associations]
symbol:rpl-3 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0032502 "developmental process" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000597
Pfam:PF00297 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 GeneTree:ENSGT00390000017606 EMBL:Z69337
EMBL:Z69336 EMBL:Z49936 EMBL:Z66495 PIR:T19771
RefSeq:NP_001021254.1 UniGene:Cel.17929 ProteinModelPortal:P50880
SMR:P50880 DIP:DIP-24912N IntAct:P50880 MINT:MINT-1054211
STRING:P50880 PaxDb:P50880 PRIDE:P50880 EnsemblMetazoa:F13B10.2a.1
EnsemblMetazoa:F13B10.2a.2 EnsemblMetazoa:F13B10.2a.3 GeneID:175501
KEGG:cel:CELE_F13B10.2 UCSC:F13B10.2d.2 CTD:175501
WormBase:F13B10.2a InParanoid:P50880 NextBio:888420
ArrayExpress:P50880 Uniprot:P50880
Length = 401
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 184/306 (60%), Positives = 232/306 (75%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSK++KKE EAVTI+ET YV TP+G R+L T+WA+HLSEE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +++ ++GKK I+A K+KKY S +RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRR-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
L+EIQVNGGTI +KVD+A EKQ+ VD VF +DEMID IGVT+G G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKGG--QES-HT 317
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N K+Y++GK +E +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 318 GITEFD 323
G TEFD
Sbjct: 300 GSTEFD 305
>UNIPROTKB|H7C422 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 ChiTaRS:RPL3
EMBL:AL022326 HGNC:HGNC:10332 ProteinModelPortal:H7C422
PRIDE:H7C422 Ensembl:ENST00000453303 Bgee:H7C422 Uniprot:H7C422
Length = 305
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 181/278 (65%), Positives = 223/278 (80%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 29 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 88
Query: 82 KPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 89 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 148
Query: 142 WCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 149 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 207
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 208 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 267
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT 299
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRT
Sbjct: 268 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRT 305
>FB|FBgn0020910 [details] [associations]
symbol:RpL3 "Ribosomal protein L3" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0022626 "cytosolic ribosome" evidence=NAS] [GO:0000022 "mitotic
spindle elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051297 "centrosome organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR000597 Pfam:PF00297 EMBL:AE014297 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000022
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925
GeneTree:ENSGT00390000017606 CTD:6122 EMBL:AF016835 EMBL:BT011339
RefSeq:NP_524316.1 RefSeq:NP_731547.1 RefSeq:NP_731550.2
UniGene:Dm.6703 ProteinModelPortal:O16797 SMR:O16797 DIP:DIP-17151N
IntAct:O16797 MINT:MINT-277369 STRING:O16797 PaxDb:O16797
PRIDE:O16797 EnsemblMetazoa:FBtr0082346 GeneID:41347
KEGG:dme:Dmel_CG4863 FlyBase:FBgn0020910 InParanoid:O16797
OMA:THILRDV OrthoDB:EOG4NCJV4 PhylomeDB:O16797 ChiTaRS:RPL3
GenomeRNAi:41347 NextBio:823392 Bgee:O16797 GermOnline:CG4863
Uniprot:O16797
Length = 416
Score = 972 (347.2 bits), Expect = 7.4e-98, P = 7.4e-98
Identities = 180/291 (61%), Positives = 221/291 (75%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGS+ F P+KR+ARHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVT++ET Y++TP GLR+L VWAQHLSEE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW ++ D GKKSI+ K+ +Y V+RV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGG+I +KV +A EK I V VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKK+Y++G G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAG 290
>UNIPROTKB|Q3SZ10 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 eggNOG:COG0087
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 HOGENOM:HOG000107319
EMBL:BC103272 IPI:IPI00711650 RefSeq:NP_001030578.1
UniGene:Bt.98804 ProteinModelPortal:Q3SZ10 SMR:Q3SZ10 STRING:Q3SZ10
PRIDE:Q3SZ10 Ensembl:ENSBTAT00000012541 GeneID:618440
KEGG:bta:618440 CTD:6123 GeneTree:ENSGT00390000017606
HOVERGEN:HBG001864 InParanoid:Q3SZ10 OMA:AQEKRVF OrthoDB:EOG43XV3G
NextBio:20901186 Uniprot:Q3SZ10
Length = 407
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 170/291 (58%), Positives = 218/291 (74%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ET YV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W ++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGGT+AEKV +A EKQ+PV +VF ++E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRG 290
>UNIPROTKB|Q92901 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0005840 "ribosome"
evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000597 Pfam:PF00297 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 EMBL:AE006640
eggNOG:COG0087 InterPro:IPR019926 PROSITE:PS00474 KO:K02925
HOGENOM:HOG000107319 CTD:6123 HOVERGEN:HBG001864 OMA:AQEKRVF
OrthoDB:EOG43XV3G EMBL:U65581 EMBL:BC050413 IPI:IPI00219335
RefSeq:NP_005052.1 UniGene:Hs.657266 ProteinModelPortal:Q92901
SMR:Q92901 IntAct:Q92901 STRING:Q92901 PhosphoSite:Q92901
DMDM:2500230 PaxDb:Q92901 PeptideAtlas:Q92901 PRIDE:Q92901
Ensembl:ENST00000268661 GeneID:6123 KEGG:hsa:6123 UCSC:uc002cnh.3
GeneCards:GC16M001993 HGNC:HGNC:10351 HPA:HPA049136
neXtProt:NX_Q92901 PharmGKB:PA34746 InParanoid:Q92901
PhylomeDB:Q92901 GenomeRNAi:6123 NextBio:23783 Bgee:Q92901
CleanEx:HS_RPL3L Genevestigator:Q92901 GermOnline:ENSG00000140986
Uniprot:Q92901
Length = 407
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 170/291 (58%), Positives = 217/291 (74%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+PG K+ K+E EAVTI+ET YV TPRGLRS T++A+HLS+E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
+W ++ +GKK +Q +KKY V+RV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK++++G+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRG 290
>UNIPROTKB|F1P5V2 [details] [associations]
symbol:RPL3L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926
PROSITE:PS00474 GeneTree:ENSGT00390000017606 OMA:AQEKRVF
EMBL:AADN02023671 IPI:IPI00587737 Ensembl:ENSGALT00000008758
Uniprot:F1P5V2
Length = 421
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 170/290 (58%), Positives = 218/290 (75%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SH KF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAF+GYKAGMTH +R+V
Sbjct: 21 SHHKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFMGYKAGMTHTLREVH 80
Query: 82 KPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PG ++ K+E EAVTIIET Y+ TP+GLR+ TV+A+H+S+E RRRFYKN
Sbjct: 81 RPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYKN 140
Query: 142 WCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +++ ++GKK ++ +KKY V+RV+ HTQ+ K+ L+QKKAH+
Sbjct: 141 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQM-KLLPLRQKKAHV 199
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 261
MEIQ+NGGT+AEKVD+ EKQI V +VF ++EMID+IGVTKG G +GV +RW +L
Sbjct: 200 MEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKL 259
Query: 262 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
PRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKK++++G G
Sbjct: 260 PRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGHG 309
>GENEDB_PFALCIPARUM|PF10_0272 [details] [associations]
symbol:PF10_0272 "ribosomal protein L3,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0006412 GO:GO:0003735
EMBL:AE014185 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625
InterPro:IPR019926 PROSITE:PS00474 KO:K02925 OMA:GFHQRTE
HOGENOM:HOG000107319 ProtClustDB:PTZ00103 RefSeq:XP_001347556.1
ProteinModelPortal:Q8IJC6 SMR:Q8IJC6 IntAct:Q8IJC6
MINT:MINT-1573865 PRIDE:Q8IJC6 EnsemblProtists:PF10_0272:mRNA
GeneID:810429 KEGG:pfa:PF10_0272 EuPathDB:PlasmoDB:PF3D7_1027800
Uniprot:Q8IJC6
Length = 386
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 173/305 (56%), Positives = 212/305 (69%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TIIE Y +TP+GLR L+TVWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW E K+ L++I+KY +V+R + HTQ K L+ KKAH
Sbjct: 121 NW---YKSEKKAFTKSLNVPEATKN--CLLKRIEKYCTVLRAICHTQPSKTP-LRMKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGG++ EK+++ EK +PV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F + R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGLKTDKNSASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>UNIPROTKB|Q8IJC6 [details] [associations]
symbol:PF10_0272 "60S ribosomal protein L3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR000597
Pfam:PF00297 GO:GO:0006412 GO:GO:0003735 EMBL:AE014185
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 InterPro:IPR019926
PROSITE:PS00474 KO:K02925 OMA:GFHQRTE HOGENOM:HOG000107319
ProtClustDB:PTZ00103 RefSeq:XP_001347556.1
ProteinModelPortal:Q8IJC6 SMR:Q8IJC6 IntAct:Q8IJC6
MINT:MINT-1573865 PRIDE:Q8IJC6 EnsemblProtists:PF10_0272:mRNA
GeneID:810429 KEGG:pfa:PF10_0272 EuPathDB:PlasmoDB:PF3D7_1027800
Uniprot:Q8IJC6
Length = 386
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 173/305 (56%), Positives = 212/305 (69%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
+KPGSKLHKKE EA TIIE Y +TP+GLR L+TVWA H+S+E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW E K+ L++I+KY +V+R + HTQ K L+ KKAH
Sbjct: 121 NW---YKSEKKAFTKSLNVPEATKN--CLLKRIEKYCTVLRAICHTQPSKTP-LRMKKAH 174
Query: 201 LMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 260
+ME+Q+NGG++ EK+++ EK +PV VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 261 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG----KGGQESH 316
LPRKTHRGLRKVACIGAWHPARV F + R GQ GY HRTE NKK+Y++G K +
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIGLKTDKNSASTD 294
Query: 317 TGITE 321
ITE
Sbjct: 295 ADITE 299
>UNIPROTKB|B5MCW2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOGENOM:HOG000107319
HOVERGEN:HBG001864 OrthoDB:EOG43XV3G ChiTaRS:RPL3 EMBL:AL022326
HGNC:HGNC:10332 IPI:IPI00877787 ProteinModelPortal:B5MCW2
SMR:B5MCW2 STRING:B5MCW2 Ensembl:ENST00000402527
ArrayExpress:B5MCW2 Bgee:B5MCW2 Uniprot:B5MCW2
Length = 272
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 145/239 (60%), Positives = 188/239 (78%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSE 132
MTHIVR+V++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+
Sbjct: 1 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60
Query: 133 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E +RRFYKNW +++ ++GKK ++ +KKY V+RV+AHTQ+R +
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP 120
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV
Sbjct: 121 -LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGV 179
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 180 TSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 238
>UNIPROTKB|G5E9G0 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0005737 GO:GO:0005730 GO:GO:0006412
EMBL:CH471095 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474 ChiTaRS:RPL3
EMBL:AL022326 UniGene:Hs.119598 HGNC:HGNC:10332 EMBL:AB266619
ProteinModelPortal:G5E9G0 SMR:G5E9G0 PRIDE:G5E9G0
Ensembl:ENST00000401609 ArrayExpress:G5E9G0 Bgee:G5E9G0
Uniprot:G5E9G0
Length = 351
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 145/239 (60%), Positives = 188/239 (78%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSE 132
MTHIVR+V++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+
Sbjct: 1 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60
Query: 133 EVRRRFYKNWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMK 192
E +RRFYKNW +++ ++GKK ++ +KKY V+RV+AHTQ+R +
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP 120
Query: 193 GLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGV 252
L+QKKAHLMEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+GV
Sbjct: 121 -LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGV 179
Query: 253 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 180 TSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 238
>UNIPROTKB|H7C3M2 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 ChiTaRS:RPL3 EMBL:AL022326 HGNC:HGNC:10332
ProteinModelPortal:H7C3M2 PRIDE:H7C3M2 Ensembl:ENST00000427905
Uniprot:H7C3M2
Length = 261
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 141/229 (61%), Positives = 179/229 (78%)
Query: 22 SHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 81
SHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 34 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 93
Query: 82 KPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYKN 141
+PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYKN
Sbjct: 94 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 153
Query: 142 WCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHL 201
W +++ ++GKK ++ +KKY V+RV+AHTQ+R + L+QKKAHL
Sbjct: 154 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 212
Query: 202 MEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYE 250
MEIQVNGGT+AEK+D+A E+Q+PV+ VF +DEMID+IGVTKGKGY+
Sbjct: 213 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYK 261
>UNIPROTKB|H9L0E4 [details] [associations]
symbol:H9L0E4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR019926 PROSITE:PS00474
GeneTree:ENSGT00390000017606 EMBL:AADN02062084
Ensembl:ENSGALT00000022725 Uniprot:H9L0E4
Length = 237
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 92/127 (72%), Positives = 112/127 (88%)
Query: 187 QIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKG 246
Q+R + L+QKK+HLMEIQVNGGT+AEKVD+A E+Q+PV +VF +DEMID+IGVTKG
Sbjct: 1 QMRLLP-LRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKG 59
Query: 247 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVY 306
KGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y
Sbjct: 60 KGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIY 119
Query: 307 KLGKGGQ 313
K+G+G Q
Sbjct: 120 KIGQGYQ 126
>UNIPROTKB|F1N578 [details] [associations]
symbol:F1N578 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0022625 GeneTree:ENSGT00390000017606
EMBL:DAAA02032569 IPI:IPI00686963 Ensembl:ENSBTAT00000038407
Uniprot:F1N578
Length = 340
Score = 256 (95.2 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 49/97 (50%), Positives = 68/97 (70%)
Query: 40 KRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTII 99
K +++H+GKV FPKD SKP L+AFLGY+AGMTH+VR V++PGSK+HKKE E VTI+
Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60
Query: 100 ETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRR 136
ET +T GL++ +V+A+H+S E +R
Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKR 97
Score = 242 (90.2 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 53/118 (44%), Positives = 76/118 (64%)
Query: 194 LKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVV 253
L QKKAHL E QVN G +A K+D+A+ E+Q+PV+ +F+ + +IG TKGK Y+G+
Sbjct: 130 LCQKKAHLTESQVNRGPVA-KLDWAHKKLEQQVPVNHIFRVRRLF-VIGTTKGKHYKGIS 187
Query: 254 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
+ W ++P KTH+ + ACI W +VA A Q G HH T +NKK+YK+G+G
Sbjct: 188 SHWYTKKVPWKTHQEFHEAACI--WD----GLSVAWARQKGCHHCT-INKKIYKIGQG 238
>UNIPROTKB|F8WCR1 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
SUPFAM:SSF50447 ChiTaRS:RPL3 EMBL:AL022326 HGNC:HGNC:10332
IPI:IPI00878827 ProteinModelPortal:F8WCR1 SMR:F8WCR1 PRIDE:F8WCR1
Ensembl:ENST00000420536 ArrayExpress:F8WCR1 Bgee:F8WCR1
Uniprot:F8WCR1
Length = 180
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 86/121 (71%), Positives = 102/121 (84%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MSHRKF PRHGSLGFLPRKR++RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++PGSK++KKE EAVTI+ET YV+TPRGLR+ TV+A+H+S+E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 141 N 141
N
Sbjct: 121 N 121
>RGD|1306315 [details] [associations]
symbol:Rpl3l "ribosomal protein L3-like" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR000597 Pfam:PF00297 RGD:1306315 GO:GO:0006412
GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625
InterPro:IPR019926 PROSITE:PS00474 GeneTree:ENSGT00390000017606
IPI:IPI00369231 PRIDE:D4A9G1 Ensembl:ENSRNOT00000019660
UCSC:RGD:1306315 OrthoDB:EOG4M3999 Uniprot:D4A9G1
Length = 240
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 79/122 (64%), Positives = 102/122 (83%)
Query: 190 KMKGLKQKKAHLMEIQVNGGTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGY 249
K+ +QKKAH+MEIQ+NGGT+AEKV +A EKQ+PV +VF + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGV 61
Query: 250 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLG 309
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKK+Y++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 310 KG 311
+G
Sbjct: 122 RG 123
>UNIPROTKB|D4A136 [details] [associations]
symbol:D4A136 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000597
Pfam:PF00297 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR009000 SUPFAM:SSF50447 GeneTree:ENSGT00390000017606
OrthoDB:EOG43XV3G IPI:IPI00559256 PRIDE:D4A136
Ensembl:ENSRNOT00000051650 Uniprot:D4A136
Length = 380
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 88/188 (46%), Positives = 120/188 (63%)
Query: 21 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 80
MS+R F PRHGSLGF P+K + H GKVK FPKDD SKP LT FL +KA MTHI++ V
Sbjct: 1 MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60
Query: 81 EKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 140
++P SK++KKE E V I+ET Y++ PRGL + V+A+H+S + ++ FYK
Sbjct: 61 DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120
Query: 141 NWCXXXXXXXXXXXXQYETDEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAH 200
NW +Y D GK+ ++ + + +KKY V+ ++AHTQ+ + L QKKAH
Sbjct: 121 NW-----HSEKKASTKY-FDMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLS-LHQKKAH 173
Query: 201 LMEIQVNG 208
LMEIQV G
Sbjct: 174 LMEIQVMG 181
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 70/153 (45%), Positives = 97/153 (63%)
Query: 160 DEGKKSIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVDYAY 219
D GK+ ++ + + +KKY V+ ++AHTQ+ + L QKKAHLMEIQV G
Sbjct: 134 DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLS-LHQKKAHLMEIQVMGHC--------- 183
Query: 220 GFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR-LPRKTHRGLRKVACIGAW 278
G ++ AV Q DE+ID+I TKG GY+GV TR + R P + G K+ C+GAW
Sbjct: 184 GLSWRE----AVNQ-DEIIDVIKETKGNGYKGV-TRVDIQRNCPERPIEGCPKL-CVGAW 236
Query: 279 HPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
HPARV+F+VA+ GQ GYHH + NKK+ K+G+G
Sbjct: 237 HPARVTFSVAQVGQKGYHHNGD-NKKICKIGQG 268
>UNIPROTKB|Q29293 [details] [associations]
symbol:RPL3 "60S ribosomal protein L3" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000597 Pfam:PF00297 GO:GO:0005730 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR019926 PROSITE:PS00474 HOVERGEN:HBG001864 EMBL:F14648
Uniprot:Q29293
Length = 130
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 65/87 (74%), Positives = 79/87 (90%)
Query: 225 QIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 284
++PV+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +
Sbjct: 1 RVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXA 60
Query: 285 FTVARAGQNGYHHRTEMNKKVYKLGKG 311
F+VARAGQ GYHHRTE+NKK+YK+G+G
Sbjct: 61 FSVARAGQKGYHHRTEINKKIYKIGQG 87
>RGD|1308952 [details] [associations]
symbol:Rab11fip3 "RAB11 family interacting protein 3 (class II)"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0004550 "nucleoside diphosphate kinase activity"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0005825 "half bridge of spindle pole
body" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006183 "GTP biosynthetic process" evidence=IEA] [GO:0006228
"UTP biosynthetic process" evidence=IEA] [GO:0006241 "CTP
biosynthetic process" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=ISO] [GO:0030306 "ADP-ribosylation factor
binding" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0032456 "endocytic
recycling" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0055037 "recycling endosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000597 InterPro:IPR001564 InterPro:IPR002048
InterPro:IPR002198 Pfam:PF00106 Pfam:PF00297 Pfam:PF00334
PRINTS:PR01243 PROSITE:PS50222 SMART:SM00562 InterPro:IPR016040
RGD:1308952 RGD:1591334 RGD:71002 GO:GO:0005739 GO:GO:0005524
GO:GO:0032403 Gene3D:3.40.50.720 GO:GO:0006412 GO:GO:0016491
GO:GO:0005840 GO:GO:0003735 GO:GO:0055114 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 SUPFAM:SSF54919 InterPro:IPR019926
PROSITE:PS00474 EMBL:AC126071 UniGene:Rn.17377 EMBL:AY383698
IPI:IPI00421361 HSSP:P15531 SMR:Q6TXF6 STRING:Q6TXF6
Ensembl:ENSRNOT00000027501 Genevestigator:Q6TXF6 Uniprot:Q6TXF6
Length = 867
Score = 356 (130.4 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 64/103 (62%), Positives = 83/103 (80%)
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
GT+AEK+D+A P++ VF + EMID++G+TKGKGY+GV +RW + PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386
Query: 269 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LRKVACIGAW PA V+F+VARAGQ GYHH+TE NKK+YK+G+G
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQG 429
>RGD|1591334 [details] [associations]
symbol:Nme4 "NME/NM23 nucleoside diphosphate kinase 4"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0004550 "nucleoside
diphosphate kinase activity" evidence=IEA;ISO] [GO:0005509 "calcium
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006183 "GTP biosynthetic process"
evidence=IEA] [GO:0006228 "UTP biosynthetic process" evidence=IEA]
[GO:0006241 "CTP biosynthetic process" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IDA]
InterPro:IPR000597 InterPro:IPR001564 InterPro:IPR002048
InterPro:IPR002198 Pfam:PF00106 Pfam:PF00297 Pfam:PF00334
PRINTS:PR01243 PROSITE:PS50222 SMART:SM00562 InterPro:IPR016040
RGD:1308952 RGD:1591334 RGD:71002 GO:GO:0005739 GO:GO:0005524
GO:GO:0032403 Gene3D:3.40.50.720 GO:GO:0006412 GO:GO:0016491
GO:GO:0005840 GO:GO:0003735 GO:GO:0055114 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0006183 GO:GO:0004550 GO:GO:0006241
GO:GO:0006228 Gene3D:3.30.70.141 SUPFAM:SSF54919 InterPro:IPR019926
PROSITE:PS00474 EMBL:AC126071 UniGene:Rn.17377 EMBL:AY383698
IPI:IPI00421361 HSSP:P15531 SMR:Q6TXF6 STRING:Q6TXF6
Ensembl:ENSRNOT00000027501 Genevestigator:Q6TXF6 Uniprot:Q6TXF6
Length = 867
Score = 356 (130.4 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 64/103 (62%), Positives = 83/103 (80%)
Query: 209 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 268
GT+AEK+D+A P++ VF + EMID++G+TKGKGY+GV +RW + PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386
Query: 269 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKG 311
LRKVACIGAW PA V+F+VARAGQ GYHH+TE NKK+YK+G+G
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQG 429
>TIGR_CMR|CHY_2309 [details] [associations]
symbol:CHY_2309 "ribosomal protein L3" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000597 InterPro:IPR019927 Pfam:PF00297
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0087 HOGENOM:HOG000100368 KO:K02906 OMA:KGMRMAG
InterPro:IPR019926 PANTHER:PTHR11229 TIGRFAMs:TIGR03625
PROSITE:PS00474 ProtClustDB:PRK00001 HAMAP:MF_01325_B
RefSeq:YP_361118.1 ProteinModelPortal:Q3A9R6 SMR:Q3A9R6
STRING:Q3A9R6 PRIDE:Q3A9R6 GeneID:3727674 KEGG:chy:CHY_2309
PATRIC:21277689 BioCyc:CHYD246194:GJCN-2308-MONOMER Uniprot:Q3A9R6
Length = 209
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 47/153 (30%), Positives = 74/153 (48%)
Query: 160 DEGKKSIQAQLEKIKKYASVVRVL-AHTQIRKMKGLKQKKAHLMEIQVNGGTIAEKVD-Y 217
++G +IQ +IK+ + V + L H +K ++ +L EI+V E +D Y
Sbjct: 43 NDGYNAIQLGFGEIKE-SKVNKPLKGHFNRANVKPMR----YLREIRV------ENIDAY 91
Query: 218 AYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL--RKVACI 275
G ++I VD +F E +D+ G++KGKG+ G + R G R P H R+ +
Sbjct: 92 EVG---QEIKVD-IFTVGEKVDVTGISKGKGFAGGIKRHGFHRGPM-AHGSKYHRRPGSL 146
Query: 276 GAWHPARVSFTVARAGQNGYHHRTEMNKKVYKL 308
GA PARV G+ G T N +V K+
Sbjct: 147 GAKGPARVFLGRKLPGRLGMERVTIQNLEVVKV 179
>UNIPROTKB|H3BQN3 [details] [associations]
symbol:RPL3L "60S ribosomal protein L3-like" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000597 Pfam:PF00297
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AC005363
HGNC:HGNC:10351 Ensembl:ENST00000565426 Bgee:H3BQN3 Uniprot:H3BQN3
Length = 43
Score = 96 (38.9 bits), Expect = 0.00025, P = 0.00025
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 73 MTHIVRDVEKPGSKLHKKETCEAVTIIETXXXXXXXXXXYVKT 115
MTH +R+V +PG K+ K+E EAVTI+ET YV T
Sbjct: 1 MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVAT 43
>TIGR_CMR|BA_0110 [details] [associations]
symbol:BA_0110 "ribosomal protein L3" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000597 InterPro:IPR019927 Pfam:PF00297 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 InterPro:IPR009000
SUPFAM:SSF50447 eggNOG:COG0087 HOGENOM:HOG000100368 KO:K02906
OMA:KGMRMAG InterPro:IPR019926 PANTHER:PTHR11229 TIGRFAMs:TIGR03625
PROSITE:PS00474 RefSeq:NP_842678.1 RefSeq:YP_016715.1
RefSeq:YP_026396.1 ProteinModelPortal:Q81VT0 SMR:Q81VT0
PRIDE:Q81VT0 DNASU:1087637 EnsemblBacteria:EBBACT00000011145
EnsemblBacteria:EBBACT00000018294 EnsemblBacteria:EBBACT00000021192
GeneID:1087637 GeneID:2818190 GeneID:2852418 KEGG:ban:BA_0110
KEGG:bar:GBAA_0110 KEGG:bat:BAS0110 ProtClustDB:PRK00001
BioCyc:BANT260799:GJAJ-121-MONOMER
BioCyc:BANT261594:GJ7F-123-MONOMER HAMAP:MF_01325_B Uniprot:Q81VT0
Length = 210
Score = 108 (43.1 bits), Expect = 0.00077, P = 0.00077
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 224 KQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH--RGLRKVACIGAWHPA 281
+++ VD VF E++D+ G++KGKG++GV+ R G +R P +H R R+ +G P
Sbjct: 95 QEVKVD-VFATGEIVDVTGISKGKGFQGVIKRHGQSRGPM-SHGSRYHRRPGSMGPVAPN 152
Query: 282 RVSFTVARAGQNGYHHRTEMNKKVYKL 308
RV AG+ G T N ++ ++
Sbjct: 153 RVFKGKKLAGRMGGDQVTIQNLEIVQV 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 301 0.00096 115 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 42
No. of states in DFA: 613 (65 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.97u 0.10s 22.07t Elapsed: 00:00:03
Total cpu time: 21.98u 0.10s 22.08t Elapsed: 00:00:03
Start: Mon May 20 16:58:41 2013 End: Mon May 20 16:58:44 2013